BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012610
(460 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 299/341 (87%), Positives = 315/341 (92%)
Query: 98 RKRKPEDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLT 157
R++KP+DHFFDVPAEEDPEVHLGQLKRFSLRELQVA+DNFSN+NILGRGGFGKVYKGRL
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 158 DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNG 217
DG+LVAVKRLKEER QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP+M NG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 218 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 277
SVASCLRER +SQPPL+W R++IALG+ARGLAYLHDHCDPKIIHRDVKAANILLDEEFE
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 278 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
AVVGDFGLAKLMDYKD HV AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 338 RAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGS 397
RAFDLARLANDDDVMLLDWV VD D++GNY +EEVEQLIQVALLCTQ S
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 398 PMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNHTPH 438
PMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFN+ H
Sbjct: 301 PMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNYPTH 341
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 599 bits (1544), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/326 (88%), Positives = 300/326 (92%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVK 165
FFDVPAEEDPEVHLGQLKRFSLRELQVA+DNF N+NILGRGGFGKVYKGRL DG LVAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 166 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE 225
RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP+M NGSVASCLRE
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 226 RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 285
R +SQPPL+W R++IALG+ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 286 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 345
AKLMDYKD HV AVRG IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 346 ANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMS 405
ANDDDVMLLDWV VD D++GNY +EEVEQLIQVALLCTQ SPMERPKMS
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 406 EVVRMLEGDGLAERWEEWQKEEMFRQ 431
EVVRMLEGDGLAERWEEWQKEEMFRQ
Sbjct: 301 EVVRMLEGDGLAERWEEWQKEEMFRQ 326
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 163/290 (56%), Gaps = 7/290 (2%)
Query: 124 RFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEV 183
R L +L+ AT+NF ++ ++G G FGKVYKG L DG+ VA+KR E +QG E +TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF-ETEI 86
Query: 184 EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL 243
E +S H +L+ L GFC E +L+Y +M NG++ L ++W R +I +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHVTTAVRG 302
GAARGL YLH IIHRDVK+ NILLDE F + DFG++K + TH+ V+G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 303 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXX 362
T+G+I PEY G+ +EK+DV+ +GV+L E++ + A + + + V L +W
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEWAVESHN 261
Query: 363 XXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
VD ++ E + + A+ C S +RP M +V+ LE
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 163/290 (56%), Gaps = 7/290 (2%)
Query: 124 RFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEV 183
R L +L+ AT+NF ++ ++G G FGKVYKG L DG+ VA+KR E +QG E +TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF-ETEI 86
Query: 184 EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL 243
E +S H +L+ L GFC E +L+Y +M NG++ L ++W R +I +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHVTTAVRG 302
GAARGL YLH IIHRDVK+ NILLDE F + DFG++K + TH+ V+G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 303 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXX 362
T+G+I PEY G+ +EK+DV+ +GV+L E++ + A + + + V L +W
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA--IVQSLPREMVNLAEWAVESHN 261
Query: 363 XXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
VD ++ E + + A+ C S +RP M +V+ LE
Sbjct: 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 168/310 (54%), Gaps = 26/310 (8%)
Query: 116 EVHLGQLKRFSLRELQVATDNFSNR------NILGRGGFGKVYKGRLTDGSLVAVKRLK- 168
EV + FS EL+ T+NF R N +G GGFG VYKG + + + VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAA 64
Query: 169 --EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVA---SCL 223
+ T+ + QF E+++++ H NL+ L GF + LVY +M NGS+ SCL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 224 RERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 283
PPL+W +R +IA GAA G+ +LH++ IHRD+K+ANILLDE F A + DF
Sbjct: 125 ----DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDF 177
Query: 284 GLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 342
GLA+ + + T + + + GT ++APE L G+ + K+D++ +GV+LLE+ITG A D
Sbjct: 178 GLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 343 ARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP 402
R + ++L +D M + VE + VA C +RP
Sbjct: 237 HR---EPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 403 KMSEVVRMLE 412
+ +V ++L+
Sbjct: 293 DIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 167/310 (53%), Gaps = 26/310 (8%)
Query: 116 EVHLGQLKRFSLRELQVATDNFSNR------NILGRGGFGKVYKGRLTDGSLVAVKRLK- 168
EV + FS EL+ T+NF R N +G GGFG VYKG + + + VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAA 64
Query: 169 --EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVA---SCL 223
+ T+ + QF E+++++ H NL+ L GF + LVY +M NGS+ SCL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 224 RERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 283
PPL+W +R +IA GAA G+ +LH++ IHRD+K+ANILLDE F A + DF
Sbjct: 125 ----DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDF 177
Query: 284 GLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 342
GLA+ + + T + + GT ++APE L G+ + K+D++ +GV+LLE+ITG A D
Sbjct: 178 GLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 343 ARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP 402
R + ++L +D M + VE + VA C +RP
Sbjct: 237 HR---EPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 403 KMSEVVRMLE 412
+ +V ++L+
Sbjct: 293 DIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 163/301 (54%), Gaps = 26/301 (8%)
Query: 125 FSLRELQVATDNFSNR------NILGRGGFGKVYKGRLTDGSLVAVKRLK---EERTQGG 175
FS EL+ T+NF R N +G GGFG VYKG + + + VAVK+L + T+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 176 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVA---SCLRERGQSQPP 232
+ QF E+++++ H NL+ L GF + LVY +M NGS+ SCL PP
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL----DGTPP 123
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-Y 291
L+W +R +IA GAA G+ +LH++ IHRD+K+ANILLDE F A + DFGLA+ + +
Sbjct: 124 LSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 292 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 351
+ + GT ++APE L G+ + K+D++ +GV+LLE+ITG A D R + +
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQL 236
Query: 352 MLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+L +D M + VE + VA C +RP + +V ++L
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
Query: 412 E 412
+
Sbjct: 296 Q 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 156/301 (51%), Gaps = 26/301 (8%)
Query: 125 FSLRELQVATDNFSNR------NILGRGGFGKVYKGRLTDGSLVAVKRLK---EERTQGG 175
FS EL+ T+NF R N G GGFG VYKG + + + VAVK+L + T+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 176 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVA---SCLRERGQSQPP 232
+ QF E+++ + H NL+ L GF + LVY + NGS+ SCL PP
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL----DGTPP 120
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-Y 291
L+W R +IA GAA G+ +LH++ IHRD+K+ANILLDE F A + DFGLA+ + +
Sbjct: 121 LSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 292 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 351
+ + GT + APE L G+ + K+D++ +GV+LLE+ITG A D R + +
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR---EPQL 233
Query: 352 MLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+L +D + VE VA C +RP + +V ++L
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKX-NDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
Query: 412 E 412
+
Sbjct: 293 Q 293
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 117/228 (51%), Gaps = 32/228 (14%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLK----EERTQGGELQFQTEVEM 185
L++ + I+G GGFGKVY+ G VAVK + E+ +Q E + E ++
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIE-NVRQEAKL 59
Query: 186 ISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP---LNWSVRKQIA 242
+M H N++ LRG C+ LV F G + L G+ PP +NW+V+
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS--GKRIPPDILVNWAVQ---- 113
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE--------AVVGDFGLAKLMDYKDT 294
ARG+ YLHD IIHRD+K++NIL+ ++ E + DFGLA ++
Sbjct: 114 --IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REW 166
Query: 295 HVTT--AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
H TT + G +APE + S+ +DV+ YGV+L EL+TG+ F
Sbjct: 167 HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 168
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 149
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 140/294 (47%), Gaps = 39/294 (13%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GEL-----QFQTEVE 184
+A + +G+GGFG V+KGRL D S+VA+K L ++G E+ +FQ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
++S H N+++L G P +V F+ G + L ++ P+ WSV+ ++ L
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLD 130
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGLAKLMDYKDTHVTTA 299
A G+ Y+ + +P I+HRD+++ NI L E A V DFGL++ + H +
Sbjct: 131 IALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG 185
Query: 300 VRGTIGHIAPEYLSTGKSS--EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 357
+ G +APE + + S EK D + + ++L ++TG+ FD + ++
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR-- 243
Query: 358 XXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ + E+ +L V LC G P +RP S +V+ L
Sbjct: 244 -------------EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 148
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 149
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 144
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 167
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 147
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 146
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 141
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M +Y H T + + +A E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 143 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GEL-----QFQTEVEMISMAVHRNLL 195
+G+GGFG V+KGRL D S+VA+K L ++G E+ +FQ EV ++S H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+L G P +V F+ G + L ++ P+ WSV+ ++ L A G+ Y+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 256 CDPKIIHRDVKAANILLDEEFE-----AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
+P I+HRD+++ NI L E A V DFG ++ + H + + G +APE
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 311 YLSTGKSS--EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXX 368
+ + S EK D + + ++L ++TG+ FD + ++
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR------------- 243
Query: 369 XVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ + E+ +L V LC G P +RP S +V+ L
Sbjct: 244 --EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 39/283 (13%)
Query: 143 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GEL-----QFQTEVEMISMAVHRNLL 195
+G+GGFG V+KGRL D S+VA+K L ++G E+ +FQ EV ++S H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+L G P +V F+ G + L ++ P+ WSV+ ++ L A G+ Y+ +
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 256 CDPKIIHRDVKAANILLDEEFE-----AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
+P I+HRD+++ NI L E A V DF L++ + H + + G +APE
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 311 YLSTGKSS--EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXX 368
+ + S EK D + + ++L ++TG+ FD + ++
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR------------- 243
Query: 369 XVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ + E+ +L V LC G P +RP S +V+ L
Sbjct: 244 --EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ +L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL-- 147
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYL-- 148
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD---THVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M K+ H T + + +A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL-- 150
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ +L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL-- 154
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL-- 149
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL-- 150
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL-- 149
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 18/204 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++GRG FG VY G L D AVK L G QF TE ++ H N+L L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 198 RGFCM-TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYLHD 254
G C+ + L+V P+M +G + + +R N +V+ I G A+G+ +L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFL-- 208
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTIGHIAPEY 311
K +HRD+ A N +LDE+F V DFGLA+ M ++ H T + + +A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT 335
L T K + K+DV+ +GV+L EL+T
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 5/199 (2%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMISMAVHRNLLRLRGFC 201
+G G FG V++ GS VAVK L E+ + +F EV ++ H N++ G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +V ++ GS+ L + G + L+ R +A A+G+ YLH+ +P I+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+K+ N+L+D+++ V DFGL++L A GT +APE L S+EK+
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA-GTPEWMAPEVLRDEPSNEKS 220
Query: 322 DVFGYGVMLLELITGQRAF 340
DV+ +GV+L EL T Q+ +
Sbjct: 221 DVYSFGVILWELATLQQPW 239
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 5/199 (2%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMISMAVHRNLLRLRGFC 201
+G G FG V++ GS VAVK L E+ + +F EV ++ H N++ G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +V ++ GS+ L + G + L+ R +A A+G+ YLH+ +P I+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HR++K+ N+L+D+++ V DFGL++L +A GT +APE L S+EK+
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-GTPEWMAPEVLRDEPSNEKS 220
Query: 322 DVFGYGVMLLELITGQRAF 340
DV+ +GV+L EL T Q+ +
Sbjct: 221 DVYSFGVILWELATLQQPW 239
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 47/319 (14%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL---- 161
F D EDP + + + ++ N S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++RL G ++V +M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 222 CLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 279
LR+ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 136 FLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 280 VGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-G 336
V DFGLA+++ D + + T + I +PE ++ K + +DV+ YG++L E+++ G
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 337 QRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALLC 393
+R + ++N D + +D EG + ++ L Q+ L C
Sbjct: 248 ERPY--WEMSNQDVIKAVD-------------------EGYRLPPPMDCPAALYQLMLDC 286
Query: 394 TQGSPMERPKMSEVVRMLE 412
Q RPK ++V +L+
Sbjct: 287 WQKDRNNRPKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 47/319 (14%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL---- 161
F D EDP + + + ++ N S ++G G FG+V GRL S
Sbjct: 22 FVDPHTYEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++RL G ++V +M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 222 CLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 279
LR+ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 136 FLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 280 VGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-G 336
V DFGL++++ D + + T + I +PE ++ K + +DV+ YG++L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 337 QRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALLC 393
+R + ++N D + +D EG + ++ L Q+ L C
Sbjct: 248 ERPY--WEMSNQDVIKAVD-------------------EGYRLPPPMDCPAALYQLMLDC 286
Query: 394 TQGSPMERPKMSEVVRMLE 412
Q RPK ++V +L+
Sbjct: 287 WQKDRNNRPKFEQIVSILD 305
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 47/319 (14%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL---- 161
F D EDP + + + ++ N S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++RL G ++V +M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 222 CLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 279
LR+ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 136 FLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCK 187
Query: 280 VGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-G 336
V DFGL++++ D + + T + I +PE ++ K + +DV+ YG++L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 337 QRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALLC 393
+R + ++N D + +D EG + ++ L Q+ L C
Sbjct: 248 ERPY--WEMSNQDVIKAVD-------------------EGYRLPPPMDCPAALYQLMLDC 286
Query: 394 TQGSPMERPKMSEVVRMLE 412
Q RPK ++V +L+
Sbjct: 287 WQKDRNNRPKFEQIVSILD 305
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 18/213 (8%)
Query: 138 SNRNILGRGGFGKVYKGRLTDGS-----LVAVKRLKEERTQGGELQFQTEVEMISMAVHR 192
+ + ++G G FG+VYKG L S VA+K LK T+ + F E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--GAARGLA 250
N++RL G +++ +M NG++ LRE+ +SV + + + G A G+
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMK 161
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIA 308
YL + +HRD+ A NIL++ V DFGL++++ D + T+ T+ + I A
Sbjct: 162 YLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
PE +S K + +DV+ +G+++ E++T G+R +
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 47/319 (14%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL---- 161
F D EDP + + + ++ N S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++RL G ++V +M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 222 CLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 279
LR+ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 136 FLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 280 VGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-G 336
V DFGL++++ D + + T + I +PE ++ K + +DV+ YG++L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 337 QRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALLC 393
+R + ++N D + +D EG + ++ L Q+ L C
Sbjct: 248 ERPY--WEMSNQDVIKAVD-------------------EGYRLPPPMDCPAALYQLMLDC 286
Query: 394 TQGSPMERPKMSEVVRMLE 412
Q RPK ++V +L+
Sbjct: 287 WQKDRNNRPKFEQIVSILD 305
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 47/319 (14%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL---- 161
F D EDP + + + ++ N S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++RL G ++V +M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 222 CLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 279
LR+ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 136 FLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 280 VGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-G 336
V DFGL +++ D + + T + I +PE ++ K + +DV+ YG++L E+++ G
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 337 QRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALLC 393
+R + ++N D + +D EG + ++ L Q+ L C
Sbjct: 248 ERPY--WEMSNQDVIKAVD-------------------EGYRLPPPMDCPAALYQLMLDC 286
Query: 394 TQGSPMERPKMSEVVRMLE 412
Q RPK ++V +L+
Sbjct: 287 WQKDRNNRPKFEQIVSILD 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 47/319 (14%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL---- 161
+ D EDP + + + ++ N S ++G G FG+V GRL S
Sbjct: 22 YVDPHTYEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++RL G ++V +M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
Query: 222 CLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 279
LR+ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 136 FLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 280 VGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-G 336
V DFGL++++ D + + T + I +PE ++ K + +DV+ YG++L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 337 QRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALLC 393
+R + ++N D + +D EG + ++ L Q+ L C
Sbjct: 248 ERPY--WEMSNQDVIKAVD-------------------EGYRLPPPMDCPAALYQLMLDC 286
Query: 394 TQGSPMERPKMSEVVRMLE 412
Q RPK ++V +L+
Sbjct: 287 WQKDRNNRPKFEQIVSILD 305
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 47/319 (14%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL---- 161
+ D EDP + + + ++ N S ++G G FG+V GRL S
Sbjct: 20 YVDPHTYEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 73
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++RL G ++V +M NGS+ S
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
Query: 222 CLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 279
LR+ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 134 FLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 185
Query: 280 VGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-G 336
V DFGL++++ D + + T + I +PE ++ K + +DV+ YG++L E+++ G
Sbjct: 186 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 245
Query: 337 QRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALLC 393
+R + ++N D + +D EG + ++ L Q+ L C
Sbjct: 246 ERPY--WEMSNQDVIKAVD-------------------EGYRLPPPMDCPAALYQLMLDC 284
Query: 394 TQGSPMERPKMSEVVRMLE 412
Q RPK ++V +L+
Sbjct: 285 WQKDRNNRPKFEQIVSILD 303
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 41/289 (14%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL----VAVKRLKEERTQGGELQFQTEVEMISMAVH 191
N S ++G G FG+V GRL S VA+K LK T+ F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--GAARGL 249
N++RL G ++V +M NGS+ S LR+ ++V + + + G A G+
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGM 160
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHI 307
YL D +HRD+ A NIL++ V DFGL++++ D + + T + I
Sbjct: 161 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXX 366
+PE ++ K + +DV+ YG++L E+++ G+R + ++N D + +D
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--WEMSNQDVIKAVD----------- 264
Query: 367 XXXVDSDMEGNYIEEEVE---QLIQVALLCTQGSPMERPKMSEVVRMLE 412
EG + ++ L Q+ L C Q RPK ++V +L+
Sbjct: 265 --------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 41/289 (14%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL----VAVKRLKEERTQGGELQFQTEVEMISMAVH 191
N S ++G G FG+V GRL S VA+K LK T+ F E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--GAARGL 249
N++RL G ++V +M NGS+ S LR+ ++V + + + G A G+
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGM 131
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHI 307
YL D +HRD+ A NIL++ V DFGL++++ D + + T + I
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXX 366
+PE ++ K + +DV+ YG++L E+++ G+R + ++N D + +D
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--WEMSNQDVIKAVD----------- 235
Query: 367 XXXVDSDMEGNYIEEEVE---QLIQVALLCTQGSPMERPKMSEVVRMLE 412
EG + ++ L Q+ L C Q RPK ++V +L+
Sbjct: 236 --------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 27/289 (9%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVE 184
SL + ++ + + ++ LG G FG+VY+G SL VAVK LKE+ + E F E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
++ H NL++L G C ++ FM G++ LRE + + V + L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VSAVVLLY 113
Query: 245 AARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
A ++ ++ + K IHRD+ A N L+ E V DFGL++LM +
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXX 363
I APE L+ K S K+DV+ +GV+L E+ T + ++ D + +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YGMSPYPGIDPSQVYE-------- 221
Query: 364 XXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
++ D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 222 -----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 41/289 (14%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL----VAVKRLKEERTQGGELQFQTEVEMISMAVH 191
N S ++G G FG+V GRL S VA+K LK T+ F E ++ H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--GAARGL 249
N++RL G ++V +M NGS+ S LR+ ++V + + + G A G+
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGM 148
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHI 307
YL D +HRD+ A NIL++ V DFGL++++ D + + T + I
Sbjct: 149 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXX 366
+PE ++ K + +DV+ YG++L E+++ G+R + ++N D + +D
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--WEMSNQDVIKAVD----------- 252
Query: 367 XXXVDSDMEGNYIEEEVE---QLIQVALLCTQGSPMERPKMSEVVRMLE 412
EG + ++ L Q+ L C Q RPK ++V +L+
Sbjct: 253 --------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 76
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 77 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 134
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA 190
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 232
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 76
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 134
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA 190
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 232
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 73
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 131
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLA 187
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 229
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 47/319 (14%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL---- 161
F D EDP + + + ++ N S ++G G FG+V GRL S
Sbjct: 22 FVDPHTFEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++RL G ++V M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 222 CLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 279
LR+ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 136 FLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCK 187
Query: 280 VGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-G 336
V DFGL++++ D + + T + I +PE ++ K + +DV+ YG++L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 337 QRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALLC 393
+R + ++N D + +D EG + ++ L Q+ L C
Sbjct: 248 ERPY--WEMSNQDVIKAVD-------------------EGYRLPPPMDCPAALYQLMLDC 286
Query: 394 TQGSPMERPKMSEVVRMLE 412
Q RPK ++V +L+
Sbjct: 287 WQKDRNNRPKFEQIVSILD 305
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 72
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 130
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 131 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLA 186
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 228
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 229 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 72
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 73 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 130
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST 314
IHRD+ A N L+ E V DFGL++LM + I APE L+
Sbjct: 131 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 187
Query: 315 GKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSD 373
K S K+DV+ +GV+L E+ T G + L+ +++ + D
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKD 229
Query: 374 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
E E++ ++ C Q +P +RP +E+ + E
Sbjct: 230 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 27/289 (9%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVE 184
SL + ++ + + ++ LG G +G+VY+G SL VAVK LKE+ + E F E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
++ H NL++L G C ++ FM G++ LRE + + V + L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE------VSAVVLLY 113
Query: 245 AARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
A ++ ++ + K IHRD+ A N L+ E V DFGL++LM +
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXX 363
I APE L+ K S K+DV+ +GV+L E+ T + ++ D + +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YGMSPYPGIDPSQVYE-------- 221
Query: 364 XXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
++ D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 222 -----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 71
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 129
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA 185
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 227
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 75
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 133
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 134 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA 189
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 231
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 232 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 76
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 134
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST 314
IHRD+ A N L+ E V DFGL++LM + I APE L+
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 191
Query: 315 GKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSD 373
K S K+DV+ +GV+L E+ T G + L+ +++ + D
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKD 233
Query: 374 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
E E++ ++ C Q +P +RP +E+ + E
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 76
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 134
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA 190
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 232
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 233 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 71
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 129
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA 185
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 227
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 73
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 131
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA 187
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 229
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 84
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 142
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 143 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA 198
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 199 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 240
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 241 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 47/319 (14%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL---- 161
+ D EDP + + + ++ N S ++G G FG+V GRL S
Sbjct: 22 YVDPHTYEDPTQTVHEFAK------ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++RL G ++V M NGS+ S
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
Query: 222 CLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 279
LR+ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 136 FLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 187
Query: 280 VGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-G 336
V DFGL++++ D + + T + I +PE ++ K + +DV+ YG++L E+++ G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 337 QRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALLC 393
+R + ++N D + +D EG + ++ L Q+ L C
Sbjct: 248 ERPY--WEMSNQDVIKAVD-------------------EGYRLPPPMDCPAALYQLMLDC 286
Query: 394 TQGSPMERPKMSEVVRMLE 412
Q RPK ++V +L+
Sbjct: 287 WQKDRNNRPKFEQIVSILD 305
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 29/280 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 73
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEK 131
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLS 313
IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L+
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLA 187
Query: 314 TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDS 372
K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EK 229
Query: 373 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 230 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 35/293 (11%)
Query: 120 GQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQF 179
G L +E++V ++GRG FG V K + VA+K+++ E + F
Sbjct: 1 GSLHMIDYKEIEV-------EEVVGRGAFGVVCKAKWRAKD-VAIKQIESESERKA---F 49
Query: 180 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRK 239
E+ +S H N+++L G C+ P LV + GS+ + L + P +
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAM 106
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTT 298
L ++G+AYLH +IHRD+K N+LL + + DFG A + TH+T
Sbjct: 107 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTN 163
Query: 299 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVX 358
+G+ +APE SEK DVF +G++L E+IT ++ FD + W
Sbjct: 164 N-KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD----EIGGPAFRIMWA- 217
Query: 359 XXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
V + I+ + + + C P +RP M E+V+++
Sbjct: 218 -----------VHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 27/289 (9%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVE 184
SL + ++ + + ++ LG G +G+VY+G SL VAVK LKE+ + E F E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 59
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
++ H NL++L G C ++ FM G++ LRE + + V + L
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VSAVVLLY 113
Query: 245 AARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
A ++ ++ + K IHRD+ A N L+ E V DFGL++LM +
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXX 363
I APE L+ K S K+DV+ +GV+L E+ T + ++ D + +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT----YGMSPYPGIDPSQVYE-------- 221
Query: 364 XXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
++ D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 222 -----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 41/289 (14%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL----VAVKRLKEERTQGGELQFQTEVEMISMAVH 191
N S ++G G FG+V GRL S VA+K LK T+ F E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--GAARGL 249
N++RL G ++V M NGS+ S LR+ ++V + + + G A G+
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGM 131
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHI 307
YL D +HRD+ A NIL++ V DFGL++++ D + + T + I
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXX 366
+PE ++ K + +DV+ YG++L E+++ G+R + ++N D + +D
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY--WEMSNQDVIKAVD----------- 235
Query: 367 XXXVDSDMEGNYIEEEVE---QLIQVALLCTQGSPMERPKMSEVVRMLE 412
EG + ++ L Q+ L C Q RPK ++V +L+
Sbjct: 236 --------EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 27/275 (9%)
Query: 140 RNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 198
++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL++L
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 321
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK--- 376
Query: 259 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKS 317
IHR++ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKF 435
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGN 377
S K+DV+ +GV+L E+ T + ++ D + + ++ D
Sbjct: 436 SIKSDVWAFGVLLWEIAT----YGMSPYPGIDLSQVYE-------------LLEKDYRME 478
Query: 378 YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
E E++ ++ C Q +P +RP +E+ + E
Sbjct: 479 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 29/276 (10%)
Query: 140 RNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 198
++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL++L
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 279
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
G C ++ FM G++ LRE + + +N V +A + + YL
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK--- 334
Query: 259 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKS 317
IHR++ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKF 393
Query: 318 SEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEG 376
S K+DV+ +GV+L E+ T G + L+ +++ + D
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYRM 435
Query: 377 NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
E E++ ++ C Q +P +RP +E+ + E
Sbjct: 436 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 28/271 (10%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
++GRG FG V K + VA+K+++ E + F E+ +S H N+++L G C
Sbjct: 15 VVGRGAFGVVCKAKWRAKD-VAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYGAC 70
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
+ P LV + GS+ + L + P + L ++G+AYLH +I
Sbjct: 71 LNPV--CLVMEYAEGGSLYNVLH-GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 262 HRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
HRD+K N+LL + + DFG A + TH+T +G+ +APE SEK
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-KGSAAWMAPEVFEGSNYSEK 183
Query: 321 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIE 380
DVF +G++L E+IT ++ FD + W V + I+
Sbjct: 184 CDVFSWGIILWEVITRRKPFD----EIGGPAFRIMWA------------VHNGTRPPLIK 227
Query: 381 EEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ + + C P +RP M E+V+++
Sbjct: 228 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 31/281 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 71
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + V + L A ++ +
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE------VSAVVLLYMATQISSAME 125
Query: 255 HCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYL 312
+ + K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 313 STGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVD 371
+ K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------E 226
Query: 372 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 31/281 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 71
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + V + L A ++ +
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE------VSAVVLLYMATQISSAME 125
Query: 255 HCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYL 312
+ + K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 313 STGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVD 371
+ K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------E 226
Query: 372 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 31/281 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 76
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + V + L A ++ +
Sbjct: 77 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VSAVVLLYMATQISSAME 130
Query: 255 HCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYL 312
+ + K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L
Sbjct: 131 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 189
Query: 313 STGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVD 371
+ K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------E 231
Query: 372 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 41/307 (13%)
Query: 125 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQ 178
F E +V+ + + LG+G FG VY+G D + VAVK + E + ++
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 179 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPP 232
F E ++ +++RL G L+V M +G + S LR E +PP
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 292
Q+A A G+AYL+ K +HRD+ A N ++ +F +GDFG+ + + Y+
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YE 182
Query: 293 DTHVTTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 350
+ +G + +APE L G + +D++ +GV+L E IT L+N+
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ- 240
Query: 351 VMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEV 407
+L +V M+G Y+++ E++ + +C Q +P RP E+
Sbjct: 241 --VLKFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
Query: 408 VRMLEGD 414
V +L+ D
Sbjct: 283 VNLLKDD 289
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 31/281 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 71
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + V + L A ++ +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VSAVVLLYMATQISSAME 125
Query: 255 HCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYL 312
+ + K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 313 STGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVD 371
+ K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------E 226
Query: 372 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S S+ IA ARG+ YLH II
Sbjct: 78 TKP--QLAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE + S
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 352
S ++DV+ +G++L EL+TGQ + + + N D ++
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 223
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 31/281 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+ + ++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 71
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
++L G C ++ FM G++ LRE + + V + L A ++ +
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VSAVVLLYMATQISSAME 125
Query: 255 HCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYL 312
+ + K IHRD+ A N L+ E V DFGL++LM DT+ A + I APE L
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESL 184
Query: 313 STGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVD 371
+ K S K+DV+ +GV+L E+ T G + L+ +++ +
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------E 226
Query: 372 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
D E E++ ++ C Q +P +RP +E+ + E
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 39/283 (13%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++G G FG+V G L VA+K LK T+ F +E ++ H N++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLRER-GQSQPPLNWSVRKQIAL--GAARGLAYLHD 254
G T +++ FM NGS+ S LR+ GQ ++V + + + G A G+ YL D
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ------FTVIQLVGMLRGIAAGMKYLAD 153
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIG--HIAPE 310
+HRD+ A NIL++ V DFGL++ + D D T+A+ G I APE
Sbjct: 154 M---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 311 YLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXX 369
+ K + +DV+ YG+++ E+++ G+R + + N D +
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMTNQDVI----------------NA 252
Query: 370 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
++ D + L Q+ L C Q RPK ++V L+
Sbjct: 253 IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 41/307 (13%)
Query: 125 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQ 178
F E +V+ + + LG+G FG VY+G D + VAVK + E + ++
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 179 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPP 232
F E ++ +++RL G L+V M +G + S LR E +PP
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 292
Q+A A G+AYL+ K +HRD+ A N ++ +F +GDFG+ + + Y+
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YE 182
Query: 293 DTHVTTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 350
+ +G + +APE L G + +D++ +GV+L E IT L+N+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ- 240
Query: 351 VMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEV 407
+L +V M+G Y+++ E++ + +C Q +P RP E+
Sbjct: 241 --VLKFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
Query: 408 VRMLEGD 414
V +L+ D
Sbjct: 283 VNLLKDD 289
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 31/277 (11%)
Query: 140 RNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 198
++ LG G +G+VY+G SL VAVK LKE+ + E F E ++ H NL++L
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLL 282
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
G C ++ FM G++ LRE + + V + L A ++ ++ +
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VSAVVLLYMATQISSAMEYLEK 336
Query: 259 K-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGK 316
K IHR++ A N L+ E V DFGL++LM DT+ A + I APE L+ K
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 317 SSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDME 375
S K+DV+ +GV+L E+ T G + L+ +++ + D
Sbjct: 396 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL------------------EKDYR 437
Query: 376 GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
E E++ ++ C Q +P +RP +E+ + E
Sbjct: 438 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 141 NILGRGGFGKVYKG-RLTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
+LG G FG VYKG + +G V A+K L E ++F E +++ H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARGLAYL 252
RL G C++PT + LV M +G + + E SQ LNW V+ A+G+ YL
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYL 133
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEY 311
+ +++HRD+ A N+L+ + DFGLA+L++ + + I +A E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+ K + ++DV+ YGV + EL+T G + +D
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 141 NILGRGGFGKVYKG-RLTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
+LG G FG VYKG + +G V A+K L E ++F E +++ H +L+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARGLAYL 252
RL G C++PT + LV M +G + + E SQ LNW V+ A+G+ YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYL 156
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEY 311
+ +++HRD+ A N+L+ + DFGLA+L++ + + I +A E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+ K + ++DV+ YGV + EL+T G + +D
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 143 LGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+GRG FG+V+ GRL D +LVAVK +E + +F E ++ H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
+V + G + LR G L Q+ AA G+ YL C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI-----APEYLSTGK 316
HRD+ A N L+ E+ + DFG+++ ++ A G + + APE L+ G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 317 SSEKTDVFGYGVMLLELIT 335
S ++DV+ +G++L E +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S S+ IA ARG+ YLH II
Sbjct: 90 TAP--QLAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 262 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS--- 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE + S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 352
S ++DV+ +G++L EL+TGQ + + + N D ++
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 235
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM 188
E +V + LG G FG+V+ G + VAVK LK+ F E ++
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 73
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--A 246
H+ L+RL +T ++ +M NGS+ L+ + + ++ K + + A A
Sbjct: 74 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIA 128
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
G+A++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 129 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 338
APE ++ G + K+DV+ +G++L E++T R
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S S+ IA ARG+ YLH II
Sbjct: 90 TKP--QLAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 262 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS--- 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE + S
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 352
S ++DV+ +G++L EL+TGQ + + + N D ++
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQII 235
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 143 LGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+GRG FG+V+ GRL D +LVAVK +E + +F E ++ H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
+V + G + LR G L Q+ AA G+ YL C I
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI-----APEYLSTGK 316
HRD+ A N L+ E+ + DFG+++ ++ A G + + APE L+ G+
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 317 SSEKTDVFGYGVMLLELIT 335
S ++DV+ +G++L E +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 78
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 79 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 131
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 192 SDVWSFGILLTEIVTHGR 209
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 83
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 84 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 197 SDVWSFGILLTEIVTHGR 214
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 41/289 (14%)
Query: 143 LGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG+G FG VY+G D + VAVK + E + ++F E ++ +++R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWSVRKQIALGAARGLA 250
L G L+V M +G + S LR E +PP Q+A A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRG--TIGHIA 308
YL+ K +HRD+ A N ++ +F +GDFG+ + + Y+ + +G + +A
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMA 199
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXX 368
PE L G + +D++ +GV+L E IT L+N+ +L +V
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VLKFV----------- 244
Query: 369 XVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 414
M+G Y+++ E++ + +C Q +P RP E+V +L+ D
Sbjct: 245 -----MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 79
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 80 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 132
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 193 SDVWSFGILLTEIVTHGR 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 85
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 86 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 138
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 199 SDVWSFGILLTEIVTHGR 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 82
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 83 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 135
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 196 SDVWSFGILLTEIVTHGR 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 83
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 84 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 136
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 197 SDVWSFGILLTEIVTHGR 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM 188
E +V + LG G FG+V+ G + VAVK LK+ F E ++
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQ 74
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--A 246
H+ L+RL +T ++ +M NGS+ L+ + + ++ K + + A A
Sbjct: 75 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIA 129
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
G+A++ + IHRD++AANIL+ + + DFGLA+L++ + + I
Sbjct: 130 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 338
APE ++ G + K+DV+ +G++L E++T R
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 41/303 (13%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTE 182
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L+V M +G + S LR E +PP
Sbjct: 72 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 131
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ K +HR++ A N ++ +F +GDFG+ + + Y+ +
Sbjct: 132 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY 187
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
+G + +APE L G + +D++ +GV+L E IT L+N+ +L
Sbjct: 188 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 243
Query: 355 DWVXXXXXXXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEVVRML 411
+V M+G Y+++ E++ + +C Q +P RP E+V +L
Sbjct: 244 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
Query: 412 EGD 414
+ D
Sbjct: 288 KDD 290
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 72
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 73 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 125
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 186 SDVWSFGILLTEIVTHGR 203
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 41/303 (13%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTE 182
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L+V M +G + S LR E +PP
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ K +HR++ A N ++ +F +GDFG+ + + Y+ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY 186
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
+G + +APE L G + +D++ +GV+L E IT L+N+ +L
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 242
Query: 355 DWVXXXXXXXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEVVRML 411
+V M+G Y+++ E++ + +C Q +P RP E+V +L
Sbjct: 243 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
Query: 412 EGD 414
+ D
Sbjct: 287 KDD 289
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 41/307 (13%)
Query: 125 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQ 178
F E +V+ + + LG+G FG VY+G D + VAVK + E + ++
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 179 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPP 232
F E ++ +++RL G L+V M +G + S LR E +PP
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 292
Q+A A G+AYL+ K +HRD+ A N ++ +F +GDFG+ + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 293 DTHVTTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 350
D +G + +APE L G + +D++ +GV+L E IT L+N+
Sbjct: 184 DXXRKGG-KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ- 240
Query: 351 VMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEV 407
+L +V M+G Y+++ E++ + +C Q +P RP E+
Sbjct: 241 --VLKFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
Query: 408 VRMLEGD 414
V +L+ D
Sbjct: 283 VNLLKDD 289
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 41/307 (13%)
Query: 125 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQ 178
F E +V+ + + LG+G FG VY+G D + VAVK + E + ++
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 179 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPP 232
F E ++ +++RL G L+V M +G + S LR E +PP
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 292
Q+A A G+AYL+ K +HRD+ A N ++ +F +GDFG+ + +
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 293 DTHVTTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 350
D +G + +APE L G + +D++ +GV+L E IT L+N+
Sbjct: 181 DXXRKGG-KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ- 237
Query: 351 VMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEV 407
+L +V M+G Y+++ E++ + +C Q +P RP E+
Sbjct: 238 --VLKFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 279
Query: 408 VRMLEGD 414
V +L+ D
Sbjct: 280 VNLLKDD 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 41/303 (13%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTE 182
E +V+ + + LG+G FG VY+G D + VAVK + E + ++F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L+V M +G + S LR E +PP
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ K +HRD+ A N ++ +F +GDFG+ + + D
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
+G + +APE L G + +D++ +GV+L E IT L+N+ +L
Sbjct: 188 KGG-KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQ---VL 242
Query: 355 DWVXXXXXXXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEVVRML 411
+V M+G Y+++ E++ + +C Q +P RP E+V +L
Sbjct: 243 KFV----------------MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
Query: 412 EGD 414
+ D
Sbjct: 287 KDD 289
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 142 ILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++G G FG+V G L VA+K LK T+ F +E ++ H N++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLRER-GQSQPPLNWSVRKQIAL--GAARGLAYLHD 254
G T +++ FM NGS+ S LR+ GQ ++V + + + G A G+ YL D
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ------FTVIQLVGMLRGIAAGMKYLAD 127
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIG--HIAPE 310
+HR + A NIL++ V DFGL++ + D D T+A+ G I APE
Sbjct: 128 M---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 311 YLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
+ K + +DV+ YG+++ E+++ G+R +
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPY 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 142 ILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++G G FG+V +GRL S VA+K LK T+ +F +E ++ H N++RL
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIAL--GAARGLAYLHD 254
G +++ FM NG++ S LR GQ ++V + + + G A G+ YL +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ------FTVIQLVGMLRGIASGMRYLAE 134
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIG--HIAPE 310
+HRD+ A NIL++ V DFGL++ + + D T+++ G I APE
Sbjct: 135 M---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 311 YLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
++ K + +D + YG+++ E+++ G+R +
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPY 222
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 50/332 (15%)
Query: 96 YWRKRKPEDHFFDVP-AEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKG 154
Y++ + PE F+ P E+P G+ R RE++ + + I+G G G+V G
Sbjct: 15 YFQGKLPEPQFYAEPHTYEEP----GRAGRSFTREIEASRIHIEK--IIGSGDSGEVCYG 68
Query: 155 RL----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 210
RL VA+K LK T+ F +E ++ H N++RL G ++V
Sbjct: 69 RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 211 YPFMVNGSVASCLRER-GQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKA 267
+M NGS+ + LR GQ +++ + + + G G+ YL D +HRD+ A
Sbjct: 129 TEYMENGSLDTFLRTHDGQ------FTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAA 179
Query: 268 ANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFG 325
N+L+D V DFGL++++ D + TT + I APE ++ S +DV+
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWS 239
Query: 326 YGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEV- 383
+GV++ E++ G+R + + N D + S EG + +
Sbjct: 240 FGVVMWEVLAYGERPY--WNMTNRD-------------------VISSVEEGYRLPAPMG 278
Query: 384 --EQLIQVALLCTQGSPMERPKMSEVVRMLEG 413
L Q+ L C +RP+ S++V +L+
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 141 NILGRGGFGKVYKG-RLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
+LG G FG VYKG + DG VA+K L+E + + E +++ +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQ--SQPPLNWSVRKQIALGAARGLAYL 252
RL G C+T T +L V M G + +RE RG+ SQ LNW ++ A+G++YL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYL 135
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEY 311
D +++HRD+ A N+L+ + DFGLA+L+D +T + + I +A E
Sbjct: 136 EDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 312 LSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+ + + ++DV+ YGV + EL+T G + +D
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 141 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ----FQTEVEMISMAVHRNLLR 196
++G+G FG VY G D + ++ + ++ E+Q F E ++ H N+L
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 197 LRGFCMTPTERL--LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG--AARGLAYL 252
L G M P E L ++ P+M +G + +R P N +V+ I+ G ARG+ YL
Sbjct: 87 LIGI-MLPPEGLPHVLLPYMCHGDLLQFIRS-----PQRNPTVKDLISFGLQVARGMEYL 140
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMD--YKDTHVTTAVRGTIGHIAP 309
+ K +HRD+ A N +LDE F V DFGLA+ ++D Y R + A
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELIT 335
E L T + + K+DV+ +GV+L EL+T
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 74 TAP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 221
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 76 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 128
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 223
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 79 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 226
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 73
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 74 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 126
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHR+++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 187 SDVWSFGILLTEIVTHGR 204
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 79 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 131
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 226
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 142 ILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++G G FG+V +GRL S VA+K LK T+ +F +E ++ H N++RL
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIAL--GAARGLAYLHD 254
G +++ FM NG++ S LR GQ ++V + + + G A G+ YL +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQ------FTVIQLVGMLRGIASGMRYLAE 136
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIG--HIAPE 310
+HRD+ A NIL++ V DFGL++ + + D T+++ G I APE
Sbjct: 137 M---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 311 YLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
++ K + +D + YG+++ E+++ G+R +
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPY 224
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 74 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 221
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 49/320 (15%)
Query: 106 FFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLT----DGSL 161
+ D EDP + Q + ++ ++G G FG+V GRL
Sbjct: 20 YIDPETYEDPNRAVHQFAK------ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVA 73
Query: 162 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS 221
VA+K LK T+ F E ++ H N++ L G ++V FM NG++ +
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
Query: 222 CLRER-GQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 278
LR+ GQ ++V + + + G A G+ YL D +HRD+ A NIL++
Sbjct: 134 FLRKHDGQ------FTVIQLVGMLRGIAAGMRYLADM---GYVHRDLAARNILVNSNLVC 184
Query: 279 VVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT- 335
V DFGL++++ D + + TT + + APE + K + +DV+ YG+++ E+++
Sbjct: 185 KVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 244
Query: 336 GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVE---QLIQVALL 392
G+R + ++N D + ++ EG + ++ L Q+ L
Sbjct: 245 GERPY--WDMSNQDVIKAIE-------------------EGYRLPAPMDCPAGLHQLMLD 283
Query: 393 CTQGSPMERPKMSEVVRMLE 412
C Q ERPK ++V +L+
Sbjct: 284 CWQKERAERPKFEQIVGILD 303
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 43/284 (15%)
Query: 142 ILGRGGFGKVYKGRLTDGSL----VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
++G G FG+V GRL VA+K LK T+ F E ++ H N++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLRER-GQSQPPLNWSVRKQIAL--GAARGLAYLHD 254
G ++V +M NGS+ + L++ GQ ++V + + + G + G+ YL D
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ------FTVIQLVGMLRGISAGMKYLSD 142
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYL 312
+HRD+ A NIL++ V DFGL++++ D + + T + I APE +
Sbjct: 143 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 313 STGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVD 371
+ K + +DV+ YG+++ E+++ G+R + + N D + ++
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPY--WEMTNQDVIKAVE---------------- 241
Query: 372 SDMEGNYIEEEVE---QLIQVALLCTQGSPMERPKMSEVVRMLE 412
EG + ++ L Q+ L C Q RPK E+V ML+
Sbjct: 242 ---EGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 135/295 (45%), Gaps = 39/295 (13%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVE 184
S+ + ++ + + ++ LG G +G+VY G SL VAVK LKE+ + E F E
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 80
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
++ H NL++L G C +V +M G++ LRE + + V + L
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE------VTAVVLLY 134
Query: 245 AARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRG 302
A ++ ++ + K IHRD+ A N L+ E V DFGL++LM DT+ A +
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKF 193
Query: 303 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXX 361
I APE L+ S K+DV+ +GV+L E+ T G + L+ D+
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDL---------- 243
Query: 362 XXXXXXXXVDSDMEGNYIEEEVE----QLIQVALLCTQGSPMERPKMSEVVRMLE 412
+E Y E+ E ++ ++ C + SP +RP +E + E
Sbjct: 244 ------------LEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 101 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 153
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 248
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 81 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 189
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 78 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 186
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 102 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 249
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 188
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 87 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 139
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 195
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 149/332 (44%), Gaps = 50/332 (15%)
Query: 96 YWRKRKPEDHFFDVP-AEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKG 154
Y++ + PE F+ P E+P G+ R RE++ + + I+G G G+V G
Sbjct: 15 YFQGKLPEPQFYAEPHTYEEP----GRAGRSFTREIEASRIHIEK--IIGSGDSGEVCYG 68
Query: 155 RL----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 210
RL VA+K LK T+ F +E ++ H N++RL G ++V
Sbjct: 69 RLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 211 YPFMVNGSVASCLRER-GQSQPPLNWSVRKQIAL--GAARGLAYLHDHCDPKIIHRDVKA 267
+M NGS+ + LR GQ +++ + + + G G+ YL D +HRD+ A
Sbjct: 129 TEYMENGSLDTFLRTHDGQ------FTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAA 179
Query: 268 ANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFG 325
N+L+D V DFGL++++ D TT + I APE ++ S +DV+
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWS 239
Query: 326 YGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEV- 383
+GV++ E++ G+R + + N D + S EG + +
Sbjct: 240 FGVVMWEVLAYGERPY--WNMTNRD-------------------VISSVEEGYRLPAPMG 278
Query: 384 --EQLIQVALLCTQGSPMERPKMSEVVRMLEG 413
L Q+ L C +RP+ S++V +L+
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 78 PHVCRLLGICLTSTVQLIMQ-LMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 186
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 83 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 135
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 191
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 10/194 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G G FG V+ G + VA+K +KE E F E E++ H L++L G C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS--EDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 203 TPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
LV+ FM +G ++ LR +RG + L G+AYL + C +I
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+ A N L+ E V DFG+ + + +T + + +PE S + S K+
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 322 DVFGYGVMLLELIT 335
DV+ +GV++ E+ +
Sbjct: 206 DVWSFGVLMWEVFS 219
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 102 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 154
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 210
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 79 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 80 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 188
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 71 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 123
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 179
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 80 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 188
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 12/198 (6%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G G+V+ G + VAVK LK+ F E ++ H+ L+RL +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD--AFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCDPKI 260
T ++ +M NGS+ L+ + + ++ K + + A A G+A++ +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLK----TPSGIKLTINKLLDMAAQIAEGMAFIEER---NY 130
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEK 320
IHRD++AANIL+ + + DFGLA+L++ + + I APE ++ G + K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 321 TDVFGYGVMLLELITGQR 338
+DV+ +G++L E++T R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 84 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 192
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 80 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 188
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 41/284 (14%)
Query: 141 NILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
++G G FG+V GRL VA+K LK T F +E ++ H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHD 254
L G +++ +M NGS+ + LR+ ++V + + + G G+ YL D
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-----RFTVIQLVGMLRGIGSGMKYLSD 149
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYL 312
+HRD+ A NIL++ V DFG+++++ D + + T + I APE +
Sbjct: 150 M---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 313 STGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVD 371
+ K + +DV+ YG+++ E+++ G+R + ++N D + ++
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIE---------------- 248
Query: 372 SDMEGNYIEEEVE---QLIQVALLCTQGSPMERPKMSEVVRMLE 412
EG + ++ L Q+ L C Q +RPK ++V ML+
Sbjct: 249 ---EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 203 TPTERLLVYPFMVNGSVASCLR-ERG--QSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
LV+ FM +G ++ LR +RG ++ L + L G+AYL + C
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC--- 123
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+IHRD+ A N L+ E V DFG+ + + +T + + +PE S + S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 320 KTDVFGYGVMLLELIT 335
K+DV+ +GV++ E+ +
Sbjct: 184 KSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 203 TPTERLLVYPFMVNGSVASCLR-ERG--QSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
LV+ FM +G ++ LR +RG ++ L + L G+AYL + C
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC--- 121
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+IHRD+ A N L+ E V DFG+ + + +T + + +PE S + S
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 320 KTDVFGYGVMLLELIT 335
K+DV+ +GV++ E+ +
Sbjct: 182 KSDVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 203 TPTERLLVYPFMVNGSVASCLR-ERG--QSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
LV+ FM +G ++ LR +RG ++ L + L G+AYL + C
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC--- 126
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+IHRD+ A N L+ E V DFG+ + + +T + + +PE S + S
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 320 KTDVFGYGVMLLELIT 335
K+DV+ +GV++ E+ +
Sbjct: 187 KSDVWSFGVLMWEVFS 202
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQT---EVEMISMAVHRNLLRLRG 199
LG G FG+V+ G + + VAVK LK G + Q E ++ H L+RL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-----GTMSVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 200 FCMTPTERLLVYPFMVNGSVASCLR--ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCD 257
++ +M GS+ L+ E G+ P QIA G+AY+
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA----EGMAYIERK-- 129
Query: 258 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 317
IHRD++AAN+L+ E + DFGLA++++ + + I APE ++ G
Sbjct: 130 -NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 188
Query: 318 SEKTDVFGYGVMLLELIT 335
+ K+DV+ +G++L E++T
Sbjct: 189 TIKSDVWSFGILLYEIVT 206
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 74 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 126
Query: 262 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 221
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 94 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 146
Query: 262 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 241
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 41/284 (14%)
Query: 141 NILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
++G G FG+V GRL VA+K LK T F +E ++ H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHD 254
L G +++ +M NGS+ + LR+ ++V + + + G G+ YL D
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-----RFTVIQLVGMLRGIGSGMKYLSD 128
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYL 312
+HRD+ A NIL++ V DFG+++++ D + + T + I APE +
Sbjct: 129 M---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 313 STGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVD 371
+ K + +DV+ YG+++ E+++ G+R + ++N D + ++
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIE---------------- 227
Query: 372 SDMEGNYIEEEVE---QLIQVALLCTQGSPMERPKMSEVVRMLE 412
EG + ++ L Q+ L C Q +RPK ++V ML+
Sbjct: 228 ---EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 41/284 (14%)
Query: 141 NILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
++G G FG+V GRL VA+K LK T F +E ++ H N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--GAARGLAYLHD 254
L G +++ +M NGS+ + LR+ ++V + + + G G+ YL D
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-----RFTVIQLVGMLRGIGSGMKYLSD 134
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYL 312
+HRD+ A NIL++ V DFG+++++ D + + T + I APE +
Sbjct: 135 M---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 313 STGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVD 371
+ K + +DV+ YG+++ E+++ G+R + ++N D + ++
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMSNQDVIKAIE---------------- 233
Query: 372 SDMEGNYIEEEVE---QLIQVALLCTQGSPMERPKMSEVVRMLE 412
EG + ++ L Q+ L C Q +RPK ++V ML+
Sbjct: 234 ---EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG V G+ VAVK +KE E FQ M+ ++ H L++ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEF-FQEAQTMMKLS-HPKLVKFYGVCS 73
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 262
+V ++ NG + + LR G+ P S ++ G+A+L H + IH
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 263 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGTIGHIAPEYLSTGKSSEKT 321
RD+ A N L+D + V DFG+ + + D +V++ + + APE K S K+
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 322 DVFGYGVMLLELIT-GQRAFDL 342
DV+ +G+++ E+ + G+ +DL
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDL 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK L +LQ F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
P +L + GS S + IA A+G+ YLH II
Sbjct: 102 TKP--QLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 262 HRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYL---STGKS 317
HRD+K+ NI L E+ +GDFGLA + + +H + G+I +APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ +G++L EL+TGQ + + + N D ++ +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPY--SNINNRDQIIFM 249
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 23/221 (10%)
Query: 124 RFSLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEE---RTQGGELQF 179
++SL++ Q+ LG G FG+V+ R +G A+K LK+E R + E
Sbjct: 2 KYSLQDFQIL-------RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVE-HT 53
Query: 180 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRK 239
E M+S+ H ++R+ G + ++ ++ G + S LR+ + P V K
Sbjct: 54 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP----VAK 109
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 299
A L YLH II+RD+K NILLD+ + DFG AK + VT
Sbjct: 110 FYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYX 162
Query: 300 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ GT +IAPE +ST ++ D + +G+++ E++ G F
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQT---EVEMISMAVHRNLLRLRG 199
LG G FG+V+ G + + VAVK LK G + Q E ++ H L+RL
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-----GTMSVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 200 FCMTPTERLLVYPFMVNGSVASCLR--ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCD 257
++ FM GS+ L+ E G+ P QIA G+AY+
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA----EGMAYIERK-- 128
Query: 258 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 317
IHRD++AAN+L+ E + DFGLA++++ + + I APE ++ G
Sbjct: 129 -NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 187
Query: 318 SEKTDVFGYGVMLLELIT 335
+ K++V+ +G++L E++T
Sbjct: 188 TIKSNVWSFGILLYEIVT 205
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A G
Sbjct: 74 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEG 126
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 182
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 143 LGRGGFGKVYKGR------LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
+G G FG+V++ R ++VAVK LKEE + + FQ E +++ + N+++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRE--------------------RGQSQPPLNWS 236
L G C L++ +M G + LR PPL+ +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKD 293
+ IA A G+AYL + K +HRD+ N L+ E + DFGL++ + DY
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 294 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
A+ I + PE + + + ++DV+ YGV+L E+ +
Sbjct: 232 ADGNDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 133 ATDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH 191
++ F LG G + VYKG T G VA+K +K + +G E+ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP--LNWSVRKQIALGAARGL 249
N++RL T + LV+ FM N + + R P L ++ K +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
A+ H++ KI+HRD+K N+L+++ + +GDFGLA+ ++ V T+ + AP
Sbjct: 122 AFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAP 177
Query: 310 EYLSTGKS-SEKTDVFGYGVMLLELITGQRAF 340
+ L ++ S D++ G +L E+ITG+ F
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +L G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 192
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +L G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 81 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 189
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ---FQTEVEMISMAVHRNLLRLRG 199
LG G FG+V+ + VAVK +K G + F E ++ H L++L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP-----GSMSVEAFLAEANVMKTLQHDKLVKLHA 77
Query: 200 FCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCD 257
+T ++ FM GS+ L+ S+ PL K I A A G+A++
Sbjct: 78 -VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP----KLIDFSAQIAEGMAFIEQR-- 130
Query: 258 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 317
IHRD++AANIL+ + DFGLA++++ + + I APE ++ G
Sbjct: 131 -NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 318 SEKTDVFGYGVMLLELITGQR 338
+ K+DV+ +G++L+E++T R
Sbjct: 190 TIKSDVWSFGILLMEIVTYGR 210
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 203 TPTERLLVYPFMVNGSVASCLR-ERG--QSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
LV FM +G ++ LR +RG ++ L + L G+AYL + C
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC--- 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+IHRD+ A N L+ E V DFG+ + + +T + + +PE S + S
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 320 KTDVFGYGVMLLELIT 335
K+DV+ +GV++ E+ +
Sbjct: 185 KSDVWSFGVLMWEVFS 200
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+ L+E + + E +++ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 111 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 163
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 219
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ F+ GS+ L++ + ++ Q +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 136
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +L G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 84 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFGLAKL+ + K+ H + I
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIKW 192
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L++ M G + +RE SQ LNW V+ A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 120 GQLKRFSLRELQVATDN---FSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGG 175
G LK + EL D FS+ +G G FG VY R + + +VA+K++ Q
Sbjct: 36 GSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN 95
Query: 176 ELQFQ---TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP 232
E ++Q EV + H N ++ RG + LV + + GS + L + P
Sbjct: 96 E-KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK---P 150
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 292
L + GA +GLAYLH H +IHRDVKA NILL E +GDFG A +M
Sbjct: 151 LQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207
Query: 293 DTHVTTAVRGTIGHIAPEY---LSTGKSSEKTDVFGYGVMLLEL 333
+ V GT +APE + G+ K DV+ G+ +EL
Sbjct: 208 NXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 77 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 185
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 79 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 187
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ---FQTEVEMISMAVHRNLLRLRG 199
LG G FG+V+ + VAVK +K G + F E ++ H L++L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKP-----GSMSVEAFLAEANVMKTLQHDKLVKLHA 250
Query: 200 FCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCD 257
+T ++ FM GS+ L+ S+ PL K I A A G+A++
Sbjct: 251 -VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP----KLIDFSAQIAEGMAFIEQR-- 303
Query: 258 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 317
IHRD++AANIL+ + DFGLA++++ + + I APE ++ G
Sbjct: 304 -NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 318 SEKTDVFGYGVMLLELITGQR 338
+ K+DV+ +G++L+E++T R
Sbjct: 363 TIKSDVWSFGILLMEIVTYGR 383
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 22/216 (10%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLV----AVKRLKEERTQGGELQFQTEVEMISMAVH 191
F +LG G FG VYKG + +G V A+K L+E + + E +++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARG 248
++ RL G C+T T +L+ M G + +RE SQ LNW V+ A+G
Sbjct: 84 PHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGH 306
+ YL D +++HRD+ A N+L+ + DFG AKL+ + K+ H + I
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIKW 192
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 341
+A E + + ++DV+ YGV + EL+T G + +D
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 24/239 (10%)
Query: 112 EEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE 170
E D Q K L + + ++FS I+GRGGFG+VY R D G + A+K L ++
Sbjct: 166 ESDKFTRFCQWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 224
Query: 171 RTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCM-----TPTERLLVYPFMVNGSVASCL 223
R + GE E M+S+ + + CM TP + + M G + L
Sbjct: 225 RIKMKQGETLALNERIMLSLVSTGDCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHL 282
Query: 224 RERGQ-SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 282
+ G S+ + + + I GL ++H+ +++RD+K ANILLDE + D
Sbjct: 283 SQHGVFSEADMRFYAAEIIL-----GLEHMHNRF---VVYRDLKPANILLDEHGHVRISD 334
Query: 283 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAF 340
GLA K H + GT G++APE L G + + + D F G ML +L+ G F
Sbjct: 335 LGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 24/239 (10%)
Query: 112 EEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE 170
E D Q K L + + ++FS I+GRGGFG+VY R D G + A+K L ++
Sbjct: 167 ESDKFTRFCQWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 171 RTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCM-----TPTERLLVYPFMVNGSVASCL 223
R + GE E M+S+ + + CM TP + + M G + L
Sbjct: 226 RIKMKQGETLALNERIMLSLVSTGDCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHL 283
Query: 224 RERGQ-SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 282
+ G S+ + + + I GL ++H+ +++RD+K ANILLDE + D
Sbjct: 284 SQHGVFSEADMRFYAAEIIL-----GLEHMHNRF---VVYRDLKPANILLDEHGHVRISD 335
Query: 283 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAF 340
GLA K H + GT G++APE L G + + + D F G ML +L+ G F
Sbjct: 336 LGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQ---TEVEMISMAVHR 192
FS+ +G G FG VY R + + +VA+K++ Q E ++Q EV + H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHP 75
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
N ++ RG + LV + + GS + L + PL + GA +GLAYL
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYL 131
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY- 311
H H +IHRDVKA NILL E +GDFG A +M + V GT +APE
Sbjct: 132 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 183
Query: 312 --LSTGKSSEKTDVFGYGVMLLEL 333
+ G+ K DV+ G+ +EL
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + + A+K L + + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 119
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H K+IHRD+K N+LL E + DFG + + + A+ GT+ ++
Sbjct: 120 ALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 173
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 14/234 (5%)
Query: 112 EEDPEVHLG-QLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKE 169
E +PE L + K ++ Q A ++F LG+G FG VY R + A+K L +
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 170 ERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERG 227
+ + G E Q + EVE+ S H N+LRL G+ T L+ + G+V L++
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 228 QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 287
+ + ++ A L+Y H ++IHRD+K N+LL E + DFG +
Sbjct: 130 KFDEQRTATYITEL----ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 182
Query: 288 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ + T + GT+ ++ PE + EK D++ GV+ E + G+ F+
Sbjct: 183 ---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 24/239 (10%)
Query: 112 EEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE 170
E D Q K L + + ++FS I+GRGGFG+VY R D G + A+K L ++
Sbjct: 167 ESDKFTRFCQWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 171 RTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCM-----TPTERLLVYPFMVNGSVASCL 223
R + GE E M+S+ + + CM TP + + M G + L
Sbjct: 226 RIKMKQGETLALNERIMLSLVSTGDCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHL 283
Query: 224 RERGQ-SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 282
+ G S+ + + + I GL ++H+ +++RD+K ANILLDE + D
Sbjct: 284 SQHGVFSEADMRFYAAEIIL-----GLEHMHNRF---VVYRDLKPANILLDEHGHVRISD 335
Query: 283 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAF 340
GLA K H + GT G++APE L G + + + D F G ML +L+ G F
Sbjct: 336 LGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 24/239 (10%)
Query: 112 EEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE 170
E D Q K L + + ++FS I+GRGGFG+VY R D G + A+K L ++
Sbjct: 167 ESDKFTRFCQWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 171 RTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCM-----TPTERLLVYPFMVNGSVASCL 223
R + GE E M+S+ + + CM TP + + M G + L
Sbjct: 226 RIKMKQGETLALNERIMLSLVSTGDCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHL 283
Query: 224 RERGQ-SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 282
+ G S+ + + + I GL ++H+ +++RD+K ANILLDE + D
Sbjct: 284 SQHGVFSEADMRFYAAEIIL-----GLEHMHNRF---VVYRDLKPANILLDEHGHVRISD 335
Query: 283 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAF 340
GLA K H + GT G++APE L G + + + D F G ML +L+ G F
Sbjct: 336 LGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 14/234 (5%)
Query: 112 EEDPEVHLG-QLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKE 169
E +PE L + K ++ Q A ++F LG+G FG VY R + A+K L +
Sbjct: 1 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 60
Query: 170 ERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERG 227
+ + G E Q + EVE+ S H N+LRL G+ T L+ + G+V L++
Sbjct: 61 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 120
Query: 228 QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 287
+ + ++A L+Y H ++IHRD+K N+LL E + DFG +
Sbjct: 121 KFDEQRTATYITELA----NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV 173
Query: 288 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ + T + GT+ ++ PE + EK D++ GV+ E + G+ F+
Sbjct: 174 ---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 132
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 133 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L+ + ++ Q +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYLGTK 136
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 137
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 138 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 138
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 139 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 139
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 140 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 22/238 (9%)
Query: 112 EEDPEVHLG-QLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKE 169
E +PE L + K ++ Q A ++F LG+G FG VY R + A+K L +
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 170 ERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERG 227
+ + G E Q + EVE+ S H N+LRL G+ T L+ + G+V L++
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 228 QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 287
+ + ++ A L+Y H ++IHRD+K N+LL E + DFG +
Sbjct: 130 KFDEQRTATYITEL----ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS- 181
Query: 288 LMDYKDTHVTTAVR----GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
H ++ R GT+ ++ PE + EK D++ GV+ E + G+ F+
Sbjct: 182 ------VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 136
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 133
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 133
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 131
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 132 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 164
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 165 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 140
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 141 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 148
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G G FG V+ G + VA+K ++E E F E E++ H L++L G C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 203 TPTERLLVYPFMVNGSVASCLR-ERG--QSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
LV+ FM +G ++ LR +RG ++ L + L G+AYL +
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEE---AS 123
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+IHRD+ A N L+ E V DFG+ + + +T + + +PE S + S
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 320 KTDVFGYGVMLLELIT 335
K+DV+ +GV++ E+ +
Sbjct: 184 KSDVWSFGVLMWEVFS 199
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G++ L +A A G+AY+ +
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYV 126
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 322 DVFGYGVMLLELITGQRA 339
DV+ +G++L EL T R
Sbjct: 187 DVWSFGILLTELTTKGRV 204
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 119
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 120 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTL 171
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G V L++ + + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELA-- 123
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 124 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERT-QGGELQF-QTEVEMIS 187
++ DNF +LG+G FGKV R+ + G L AVK LK++ Q +++ TE ++S
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
+A + L C +RL VNG L Q + + + A
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGD---LMFHIQKSRRFDEARARFYAAEIIS 135
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV-RGTIGH 306
L +LHD II+RD+K N+LLD E + DFG+ K + VTTA GT +
Sbjct: 136 ALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDY 190
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF------DLARLANDDDVMLLDWV 357
IAPE L D + GV+L E++ G F DL +D+V+ W+
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWL 247
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL--- 148
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 142 ILGRGGFGKVYK-GRLTDGSLVAVKRLK--EERTQGGELQFQTEVEMISMAVHRNLLRLR 198
+LG+G FG+ K G ++ +K L +E TQ F EV+++ H N+L+
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQR---TFLKEVKVMRCLEHPNVLKFI 73
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
G + ++ G++ ++ P WS R A A G+AYLH
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP---WSQRVSFAKDIASGMAYLHSM--- 127
Query: 259 KIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYK------------DTHVTTAVRGTIG 305
IIHRD+ + N L+ E VV DFGLA+LM D K D V G
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
+APE ++ EK DVF +G++L E+I
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 32/254 (12%)
Query: 110 PAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKR-L 167
P+E+ +V K LR+L+V LG G FG V+KG + +G + + +
Sbjct: 16 PSEKANKVLARIFKETELRKLKV----------LGSGVFGTVHKGVWIPEGESIKIPVCI 65
Query: 168 KEERTQGGELQFQTEVE-MISMAV--HRNLLRLRGFCMTPTERL-LVYPFMVNGSVASCL 223
K + G FQ + M+++ H +++RL G C P L LV ++ GS+ +
Sbjct: 66 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHV 123
Query: 224 RE-RGQSQPPL--NWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 280
R+ RG P L NW V+ A+G+ YL +H ++HR++ A N+LL + V
Sbjct: 124 RQHRGALGPQLLLNWGVQ------IAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQV 174
Query: 281 GDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQR 338
DFG+A L+ D + + + I +A E + GK + ++DV+ YGV + EL+T G
Sbjct: 175 ADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAE 234
Query: 339 AFDLARLANDDDVM 352
+ RLA D++
Sbjct: 235 PYAGLRLAEVPDLL 248
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G++ L +A A G+AY+ +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L EL T R
Sbjct: 363 DVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G++ L +A A G+AY+ +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L EL T R
Sbjct: 363 DVWSFGILLTELTTKGR 379
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 123
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 124 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G++ L +A A G+AY+ +
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYV 129
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L EL T R
Sbjct: 190 DVWSFGILLTELTTKGR 206
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 202
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 202
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 216
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 216
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 21/221 (9%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G V L++ + + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELA-- 123
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 301
L+Y H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 124 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 171
Query: 302 -GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
GT+ ++ PE + EK D++ GV+ E + G+ F+
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 146 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 201
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 121
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 122 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 173
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 161 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 216
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 123
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 124 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 119
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 173
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 118
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 119 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 172
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L++ M G + S LR E P + S
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 194
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 147 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI-YRASYYRK 202
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 173 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 228
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 229 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 163 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 218
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 219 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 146 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 201
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 153 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 208
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 209 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G++ L +A A G+AY+ +
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYV 385
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L EL T R
Sbjct: 446 DVWSFGILLTELTTKGR 462
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 119
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYL 173
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 119
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + A+ GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 173
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 143 LGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG G FGKV+ D LVAVK LKE ++ FQ E E+++M H++++R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-----------SQPPLNWSVRKQIALGA 245
G C L+V+ +M +G + LR G + PL +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTI 304
A G+ YL +HRD+ N L+ + +GDFG+++ + D + V I
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ PE + K + ++DV+ +GV+L E+ T
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGR---LTD--GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R L D G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 133
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHRD+ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 143 LGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG G FGKV+ D LVAVK LKE ++ FQ E E+++M H++++R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 84
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-----------SQPPLNWSVRKQIALGA 245
G C L+V+ +M +G + LR G + PL +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTI 304
A G+ YL +HRD+ N L+ + +GDFG+++ + D + V I
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ PE + K + ++DV+ +GV+L E+ T
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 121
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 122 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 173
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 122
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + A+ GT+ ++
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 176
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 123
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 177
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 119
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYL 173
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ ++
Sbjct: 138 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRK 193
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G++ L +A A G+AY+ +
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLK--GETGKYLRLPQLVDMAAQIASGMAYVERM---NYV 302
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L EL T R
Sbjct: 363 DVWSFGILLTELTTKGR 379
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFC 201
+G G FG VYKG+ VAVK LK + Q F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY- 100
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
MT +V + S+ L + + IA A+G+ YLH II
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NII 154
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKS--- 317
HRD+K+ NI L E +GDFGLA + + + G++ +APE + +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
S ++DV+ YG++L EL+TG+ + + + N D ++ +
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPY--SHINNRDQIIFM 249
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L++ M G + S LR E P + S
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 187
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 118
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 119 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTL 170
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 143 LGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG G FGKV+ D LVAVK LKE ++ FQ E E+++M H++++R
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 107
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-----------SQPPLNWSVRKQIALGA 245
G C L+V+ +M +G + LR G + PL +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTI 304
A G+ YL +HRD+ N L+ + +GDFG+++ + D + V I
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ PE + K + ++DV+ +GV+L E+ T
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L++ M G + S LR E P + S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 181
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G+ L +A A G+AY+ +
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 322 DVFGYGVMLLELITGQRA 339
DV+ +G++L EL T R
Sbjct: 197 DVWSFGILLTELTTKGRV 214
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 119
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 120 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTL 171
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L++ M G + S LR E P + S
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 187
Query: 297 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 18/225 (8%)
Query: 125 FSLRELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQ 178
F E +VA + + LG+G FG VY KG + D + VA+K + E + ++
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 179 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPP 232
F E ++ +++RL G L++ M G + S LR E P
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 292
+ S Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YE 181
Query: 293 DTHVTTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ +G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L++ M G + S LR E P + S
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 188
Query: 297 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 119
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYL 173
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 115/223 (51%), Gaps = 22/223 (9%)
Query: 141 NILGRGGFGKVYKGR-LTDGSLVAVKR-LKEERTQGGELQFQTEVE-MISMAV--HRNLL 195
+LG G FG V+KG + +G + + +K + G FQ + M+++ H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 196 RLRGFCMTPTERL-LVYPFMVNGSVASCLRE-RGQSQPPL--NWSVRKQIALGAARGLAY 251
RL G C P L LV ++ GS+ +R+ RG P L NW V+ A+G+ Y
Sbjct: 79 RLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYY 130
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPE 310
L +H ++HR++ A N+LL + V DFG+A L+ D + + + I +A E
Sbjct: 131 LEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 311 YLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVM 352
+ GK + ++DV+ YGV + EL+T G + RLA D++
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL 230
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 123
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+
Sbjct: 124 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTL 175
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 21/221 (9%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 119
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 301
L+Y H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 120 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDTL 167
Query: 302 -GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
GT+ ++ PE + EK D++ GV+ E + G+ F+
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 21/221 (9%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 120
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR--- 301
L+Y H ++IHRD+K N+LL E + DFG + H ++ R
Sbjct: 121 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 168
Query: 302 -GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
GT+ ++ PE + EK D++ GV+ E + G+ F+
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQ-FQTEVEMISMAVH 191
++F N+LG+G F VY+ + G VA+K + K+ + G +Q Q EV++ H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++L L + LV NG + L+ R + P + + + G+ Y
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK---PFSENEARHFMHQIITGMLY 127
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPE 310
LH H I+HRD+ +N+LL + DFGLA + + H T GT +I+PE
Sbjct: 128 LHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISPE 182
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND-DDVMLLDW 356
+ ++DV+ G M L+ G+ FD + N + V+L D+
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 122
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 303
L+Y H ++IHRD+K N+LL E + DFG + H ++ R GT
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGT 172
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ ++ PE + EK D++ GV+ E + G+ F+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-V 73
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 262
+ +V +M GS+ L+ G+ L +A A G+AY+ +H
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVH 128
Query: 263 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 322
RD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+D
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 323 VFGYGVMLLELITGQRA 339
V+ +G++L EL T R
Sbjct: 189 VWSFGILLTELTTKGRV 205
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 159
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G+ L +A A G+AY+ +
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 322 DVFGYGVMLLELITGQRA 339
DV+ +G++L EL T R
Sbjct: 197 DVWSFGILLTELTTKGRV 214
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 159
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-T 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-V 71
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 262
+ +V +M GS+ L+ G+ L +A A G+AY+ +H
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVH 126
Query: 263 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 322
RD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+D
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 323 VFGYGVMLLELITGQRA 339
V+ +G++L EL T R
Sbjct: 187 VWSFGILLTELTTKGRV 203
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G+ L +A A G+AY+ +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 322 DVFGYGVMLLELITGQRA 339
DV+ +G++L EL T R
Sbjct: 197 DVWSFGILLTELTTKGRV 214
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 262
+ +V +M GS+ L+ G+ L +A A G+AY+ +H
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 263 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 322
RD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 323 VFGYGVMLLELITGQRA 339
V+ +G++L EL T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G+ L +A A G+AY+ +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 322 DVFGYGVMLLELITGQRA 339
DV+ +G++L EL T R
Sbjct: 197 DVWSFGILLTELTTKGRV 214
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 116
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 117 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 170
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G+ F+
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 122
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 303
L+Y H ++IHRD+K N+LL E + DFG + H ++ R GT
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGT 172
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ ++ PE + EK D++ GV+ E + G+ F+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 159
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L++ M G + S LR E P + S
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 161 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 216
Query: 297 TTAVRGT--IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 217 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA----N 119
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 303
L+Y H ++IHRD+K N+LL E + DFG + H ++ R GT
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGT 169
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ ++ PE + EK D++ GV+ E + G+ F+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 159
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G++ L ++ A G+AY+ +
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLK--GETGKYLRLPQLVDMSAQIASGMAYVERM---NYV 133
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 322 DVFGYGVMLLELITGQRA 339
DV+ +G++L EL T R
Sbjct: 194 DVWSFGILLTELTTKGRV 211
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 159
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ +
Sbjct: 164 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRAGYYRK 219
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G++ L ++ A G+AY+ +
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLK--GETGKYLRLPQLVDMSAQIASGMAYVERM---NYV 133
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 322 DVFGYGVMLLELITGQRA 339
DV+ +G++L EL T R
Sbjct: 194 DVWSFGILLTELTTKGRV 211
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 18/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLT----DGS--LVAVKRLKEERTQGGELQFQTEVE 184
+V N + LG G FG+VY+G+++ D S VAVK L E ++ EL F E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE-RGQSQPPLNWSVRK--QI 241
+IS H+N++R G + R ++ M G + S LRE R + P + ++ +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKLMDYKDTHVTT 298
A A G YL ++ IHRD+ A N LL A +GDFG+A+ + Y+ +
Sbjct: 187 ARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRAGYYRK 242
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ + PE G + KTD + +GV+L E+ +
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 159
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 143 LGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG+G FG V R G +VAVK+L+ T+ F+ E+E++ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C + R L+ ++ GS+ L++ + ++ Q +G+ YL
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 134
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ IHR++ NIL++ E +GDFGL K++ D + V I APE L+
Sbjct: 135 ---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K S +DV+ +GV+L EL T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 159
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 159
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 121
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + +FG + + + T + GT+
Sbjct: 122 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTL 173
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEXSYDINRVPEEQMTFKDL 159
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 43/298 (14%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L++ M G + S LR E P + S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N + E+F +GDFG+ + + Y+ +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDI-YETDYY 181
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVML 353
+G + ++PE L G + +DV+ +GV+L E+ T ++ + L+N+ +
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ--GLSNEQVLRF 239
Query: 354 LDWVXXXXXXXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEVV 408
+ MEG +++ + L+++ +C Q +P RP E++
Sbjct: 240 V-------------------MEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVE 184
++ Q A ++F LG+G FG VY R + A+K L + + + G E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
+ S H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA-- 120
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
L+Y H ++IHRD+K N+LL E + +FG + + + T + GT+
Sbjct: 121 --NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTL 172
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ PE + EK D++ GV+ E + G+ F+
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQP------PLNWS 236
++ +++RL G L++ M G + S LR + P + S
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 194
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 151
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 152 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 148
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 149 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 146
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 147 VSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK++ T+ +E+EM+ M H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-------LNWSVRKQIALG-- 244
++ L G C ++ + G++ LR R +PP +N +Q+
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRAR---RPPGMEYSYDINRVPEEQMTFKDL 205
Query: 245 ------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
ARG+ YL K IHRD+ A N+L+ E + DFGLA+ ++ D + T
Sbjct: 206 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV++ E+ T
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 48/298 (16%)
Query: 143 LGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG G FGKV+ D LVAVK LK+ T FQ E E+++ H ++++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNLQHEHIVK 81
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERG------------QSQPPLNWSVRKQIALG 244
G C ++V+ +M +G + LR G Q++ L S IA
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGT 303
A G+ YL +HRD+ N L+ +GDFG+++ + D + V
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXX 362
I + PE + K + ++DV+ +GV+L E+ T G++ + +L+N +
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW--FQLSNTE------------- 243
Query: 363 XXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLA 417
++ +G +E +++ V L C Q P +R + E+ ++L G A
Sbjct: 244 ------VIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK + T+ +E+EM+ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-LNWSVRKQ------------ 240
++ L G C ++ + G++ L+ R +PP L +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR---EPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 241 --IALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G+ L +A A G+AY+ +
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 136
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+ AANIL+ E V DFGLA+L++ + + I APE G+ + K+
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L EL T R
Sbjct: 197 DVWSFGILLTELTTKGR 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 143 LGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG G FGKV R G VAVK LK E + E+E++ H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C L+ F+ +GS+ L +++ +N + + A+ +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ +HRD+ A N+L++ E + +GDFGL K + D + V + APE L
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K +DV+ +GV L EL+T
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK + T+ +E+EM+ M H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-LNWSVRKQ------------ 240
++ L G C ++ + G++ L+ R +PP L +S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 241 --IALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + T
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV+L E+ T
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 262
+ +V +M G + L+ G+ L +A A G+AY+ +H
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 263 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 322
RD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 323 VFGYGVMLLELITGQRA 339
V+ +G++L EL T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 143 LGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG G FGKV R G VAVK LK E + E+E++ H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+G C L+ F+ +GS+ L +++ +N + + A+ +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
+ +HRD+ A N+L++ E + +GDFGL K + D + V + APE L
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 314 TGKSSEKTDVFGYGVMLLELIT 335
K +DV+ +GV L EL+T
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 18/221 (8%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQP------PLNWS 236
++ +++RL G L++ M G + S LR + P + S
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + Y+ +
Sbjct: 129 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 184
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 185 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK + T+ +E+EM+ M H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-LNWSVRKQ------------ 240
++ L G C ++ + G++ L+ R +PP L +S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 241 --IALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + T
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV+L E+ T
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK + T+ +E+EM+ M H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-LNWSVRKQ------------ 240
++ L G C ++ + G++ L+ R +PP L +S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 241 --IALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + T
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV+L E+ T
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 49/313 (15%)
Query: 141 NILGRGGFGKVYKGR--LTDGSLVAVKRLKEERTQGGEL--QFQTEVEMISMAVHRNLLR 196
+ LG G FGKV G+ LT G VAVK L ++ + ++ + + E++ + + H ++++
Sbjct: 22 DTLGVGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L TP++ +V ++ G + + + G+ L+ +++ G+ Y H H
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGR----LDEKESRRLFQQILSGVDYCHRHM 136
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 316
++HRD+K N+LLD A + DFGL+ +M D G+ + APE +S G+
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRXSCGSPNYAAPEVIS-GR 190
Query: 317 --SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDM 374
+ + D++ GV+L L+ G FD DD V L D
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFD------DDHVPTL-----------FKKICDGIF 233
Query: 375 -EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDF 433
Y+ V L++ L Q PM+R + ++ R EW K+++ + F
Sbjct: 234 YTPQYLNPSVISLLKHML---QVDPMKRATIKDI-----------REHEWFKQDLPKYLF 279
Query: 434 NHTPHPNNTWIVD 446
P ++T I D
Sbjct: 280 PEDPSYSSTMIDD 292
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK + T+ +E+EM+ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-LNWSVRKQ------------ 240
++ L G C ++ + G++ L+ R +PP L +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 241 --IALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVE 184
+ N + LG G FGKV+ D LVAVK LK+ + F E E
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAE 67
Query: 185 MISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERG-------QSQPP--LNW 235
+++ H ++++ G C+ ++V+ +M +G + LR G + PP L
Sbjct: 68 LLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 236 SVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 295
S IA A G+ YL +HRD+ N L+ E +GDFG+++ + D +
Sbjct: 128 SQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY 184
Query: 296 -VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
V I + PE + K + ++DV+ GV+L E+ T
Sbjct: 185 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEER--TQGGELQFQTEVEMIS 187
+ D+F LG+G FG VY R + A+K L + + +G E Q + E+E+ S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LR+ + L+ F G + L++ G+ + + +++A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA----D 125
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 303
L Y H+ K+IHRD+K N+L+ + E + DFG + H + R GT
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 175
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ ++ PE + EK D++ GV+ E + G FD
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK T E F E +++ H L++L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPE-AFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 262
+ +V +M G + L+ G+ L +A A G+AY+ +H
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 263 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTD 322
RD++AANIL+ E V DFGLA+L++ + + I APE G+ + K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 323 VFGYGVMLLELITGQRA 339
V+ +G++L EL T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK + T+ +E+EM+ M H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-LNWSVRKQ------------ 240
++ L G C ++ + G++ L+ R +PP L +S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 241 --IALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + T
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV+L E+ T
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEER--TQGGELQFQTEVEMIS 187
+ D+F LG+G FG VY R + A+K L + + +G E Q + E+E+ S
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LR+ + L+ F G + L++ G+ + + +++A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA----D 126
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 303
L Y H+ K+IHRD+K N+L+ + E + DFG + H + R GT
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 176
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ ++ PE + EK D++ GV+ E + G FD
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEER--TQGGELQFQTEVEMIS 187
+ D+F LG+G FG VY R + A+K L + + +G E Q + E+E+ S
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LR+ + L+ F G + L++ G+ + + +++A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA----D 125
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 303
L Y H+ K+IHRD+K N+L+ + E + DFG + H + R GT
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCGT 175
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ ++ PE + EK D++ GV+ E + G FD
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 43/298 (14%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L++ M G + S LR E P + S
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + D
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVML 353
+G + ++PE L G + +DV+ +GV+L E+ T ++ + L+N+ +
Sbjct: 181 KGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ--GLSNEQ---V 234
Query: 354 LDWVXXXXXXXXXXXXVDSDMEGNYIEEE---VEQLIQVALLCTQGSPMERPKMSEVV 408
L +V MEG +++ + L+++ +C Q +P RP E++
Sbjct: 235 LRFV----------------MEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVY----KGRLTDG--SLVAVKRLKEERTQGGELQFQTE 182
E +VA + + LG+G FG VY KG + D + VA+K + E + ++F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 183 VEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLR------ERGQSQPPLNWS 236
++ +++RL G L++ M G + S LR E P + S
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
Q+A A G+AYL+ + K +HRD+ A N ++ E+F +GDFG+ + + D
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 297 TTAVRG--TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + ++PE L G + +DV+ +GV+L E+ T
Sbjct: 190 KGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG+G FG+V+ G + VA+K LK F E +++ H L++L + +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNM--SPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
E + +V +M GS+ L+ G+ L +A A G+AY+ +
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVERM---NYV 303
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD++AANIL+ E V DFGL +L++ + + I APE G+ + K+
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L EL T R
Sbjct: 364 DVWSFGILLTELTTKGR 380
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELA----N 123
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
L+Y H ++IHRD+K N+LL E + DFG + + + T + GT+ ++
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYL 177
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
PE + EK D++ GV+ E + G F+
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FGKVYK + + S++A ++ + +++ + E+++++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 262
++ F G+V + + E + PL S + + L YLHD+ KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 263 RDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 318
RD+KA NIL + + + DFG++ + + +D+ + GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWMAPEVVMCETSK 213
Query: 319 E-----KTDVFGYGVMLLEL 333
+ K DV+ G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FGKVYK + + S++A ++ + +++ + E+++++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 262
++ F G+V + + E + PL S + + L YLHD+ KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 263 RDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 318
RD+KA NIL + + + DFG++ + + +D+ + GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCETSK 213
Query: 319 E-----KTDVFGYGVMLLEL 333
+ K DV+ G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG+V+ G + VA+K LK T E F E +++ H L++L + +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPE-SFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 203 TPTERL-LVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
E + +V +M GS+ L++ R P L +A A G+AY+
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNL-----VDMAAQVAAGMAYIERM--- 124
Query: 259 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 318
IHRD+++ANIL+ + DFGLA+L++ + + I APE G+ +
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 319 EKTDVFGYGVMLLELITGQRA 339
K+DV+ +G++L EL+T R
Sbjct: 185 IKSDVWSFGILLTELVTKGRV 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK + T+ +E+EM+ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-LNWSVRKQ------------ 240
++ L G C ++ + G++ L+ R +PP L +S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 241 --IALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVT 297
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 28/201 (13%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ---FQTEVEMISMAVHRNLLRLRG 199
LG G FG+V+ + VAVK +K G + F E ++ H L++L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP-----GSMSVEAFLAEANVMKTLQHDKLVKLHA 244
Query: 200 FCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA--ARGLAYLHDHCD 257
+T ++ FM GS+ L+ S+ PL K I A A G+A++
Sbjct: 245 -VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP----KLIDFSAQIAEGMAFIEQR-- 297
Query: 258 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 317
IHRD++AANIL+ + DFGLA++ + I APE ++ G
Sbjct: 298 -NYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSF 346
Query: 318 SEKTDVFGYGVMLLELITGQR 338
+ K+DV+ +G++L+E++T R
Sbjct: 347 TIKSDVWSFGILLMEIVTYGR 367
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK + T+ +E+EM+ M H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP---------------LNWSVR 238
++ L G C ++ + G++ L+ R +PP L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 239 KQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + T
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV+L E+ T
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G+G FG V G G+ VAVK +K + T F E +++ H NL++L G +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
L +V +M GS+ LR RG+S L + +L + YL + +
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGN---NFV 124
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+ A N+L+ E+ A V DFGL K V+ T APE L K S K+
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 180
Query: 322 DVFGYGVMLLELITGQRA 339
DV+ +G++L E+ + R
Sbjct: 181 DVWSFGILLWEIYSFGRV 198
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G+G FG V G G+ VAVK +K + T F E +++ H NL++L G +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
L +V +M GS+ LR RG+S L + +L + YL + +
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGN---NFV 311
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+ A N+L+ E+ A V DFGL K V+ T APE L K S K+
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 367
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L E+ + R
Sbjct: 368 DVWSFGILLWEIYSFGR 384
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 143 LGRGGFGKVY--------KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM-AVHRN 193
LG G FG+V K + + VAVK LK + T+ +E+EM+ M H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP---------------LNWSVR 238
++ L G C ++ + G++ L+ R +PP L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAR---RPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 239 KQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VT 297
A ARG+ YL K IHRD+ A N+L+ E+ + DFGLA+ + + D + T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 298 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
T R + +APE L + ++DV+ +GV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 104/212 (49%), Gaps = 36/212 (16%)
Query: 143 LGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRN-L 194
LG+G FG V R G+LVAVK+L+ G + Q FQ E++++ A+H + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILK-ALHSDFI 70
Query: 195 LRLRGFCMTP--TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
++ RG P E LV ++ +G CLR+ Q R + L A+R L Y
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSG----CLRDFLQ---------RHRARLDASRLLLYS 117
Query: 253 HDHC-------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKL--MDYKDTHVTTAVRGT 303
C + +HRD+ A NIL++ E + DFGLAKL +D V +
Sbjct: 118 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
I APE LS S ++DV+ +GV+L EL T
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 36/212 (16%)
Query: 143 LGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRN-L 194
LG+G FG V R G+LVAVK+L+ G + Q FQ E++++ A+H + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILK-ALHSDFI 73
Query: 195 LRLRGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
++ RG P + LV ++ +G CLR+ Q R + L A+R L Y
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSG----CLRDFLQ---------RHRARLDASRLLLYS 120
Query: 253 HDHC-------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAV-RGT 303
C + +HRD+ A NIL++ E + DFGLAKL+ KD +V +
Sbjct: 121 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
I APE LS S ++DV+ +GV+L EL T
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 31/217 (14%)
Query: 140 RNILGRGGFGKVYKGRLTDGSL---VAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLL 195
++++G G FG+V K R+ L A+KR+KE ++ F E+E++ + H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRER------------GQSQPPLNWSVRKQIAL 243
L G C L + +G++ LR+ + L+ A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
ARG+ YL + IHRD+ A NIL+ E + A + DFGL++ + V+ T
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKT 189
Query: 304 IGHI-----APEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + A E L+ + +DV+ YGV+L E+++
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G+G FG V G G+ VAVK +K + T F E +++ H NL++L G +
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
L +V +M GS+ LR RG+S L + +L + YL + +
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGN---NFV 139
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+ A N+L+ E+ A V DFGL K V+ T APE L K S K+
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKS 195
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L E+ + R
Sbjct: 196 DVWSFGILLWEIYSFGR 212
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 20/200 (10%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FGKVYK + + S++A ++ + +++ + E+++++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 203 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 262
++ F G+V + + E + PL S + + L YLHD+ KIIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 263 RDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 318
RD+KA NIL + + + DFG++ + + +D + GT +APE + S
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-----GTPYWMAPEVVMCETSK 213
Query: 319 E-----KTDVFGYGVMLLEL 333
+ K DV+ G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 31/217 (14%)
Query: 140 RNILGRGGFGKVYKGRLTDGSL---VAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLL 195
++++G G FG+V K R+ L A+KR+KE ++ F E+E++ + H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRER------------GQSQPPLNWSVRKQIAL 243
L G C L + +G++ LR+ + L+ A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
ARG+ YL + IHRD+ A NIL+ E + A + DFGL++ + V+ T
Sbjct: 150 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKT 199
Query: 304 IGHI-----APEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + A E L+ + +DV+ YGV+L E+++
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLV-AVKRLKEERTQ--GGELQFQTEVEMIS 187
Q ++F LG+G FG VY R + A+K L + + + G E Q + EVE+ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+LRL G+ T L+ + G+V L++ + + ++A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELA----N 123
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GT 303
L+Y H ++IHRD+K N+LL E + DFG + H ++ R GT
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS-------VHAPSSRRDTLCGT 173
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ ++ PE + EK D++ GV+ E + G F+
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 36/212 (16%)
Query: 143 LGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRN-L 194
LG+G FG V R G+LVAVK+L+ G + Q FQ E++++ A+H + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILK-ALHSDFI 74
Query: 195 LRLRGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
++ RG P + LV ++ +G CLR+ Q R + L A+R L Y
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSG----CLRDFLQ---------RHRARLDASRLLLYS 121
Query: 253 HDHC-------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAV-RGT 303
C + +HRD+ A NIL++ E + DFGLAKL+ KD +V +
Sbjct: 122 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
I APE LS S ++DV+ +GV+L EL T
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 106/212 (50%), Gaps = 36/212 (16%)
Query: 143 LGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRN-L 194
LG+G FG V R G+LVAVK+L+ G + Q FQ E++++ A+H + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILK-ALHSDFI 86
Query: 195 LRLRGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
++ RG P + LV ++ +G CLR+ Q R + L A+R L Y
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSG----CLRDFLQ---------RHRARLDASRLLLYS 133
Query: 253 HDHC-------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTTAV-RGT 303
C + +HRD+ A NIL++ E + DFGLAKL+ KD +V +
Sbjct: 134 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
I APE LS S ++DV+ +GV+L EL T
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
F + LG G F +V G L AVK + ++ +G E + E+ ++ H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
L +P LV + G + + E+G ++ +Q+ + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQV----LDAVYYLHRM 139
Query: 256 CDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
I+HRD+K N+L DEE + ++ DFGL+K M+ K ++TA GT G++APE L
Sbjct: 140 ---GIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTAC-GTPGYVAPEVL 194
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ S+ D + GV+ L+ G F
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 142 ILGRGGFGK-----------VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV 190
LG+GGF K V+ G++ SL+ +E + E+ +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE--------KMSMEISIHRSLA 97
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
H++++ GF +V S+ + R P +QI LG
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ---- 153
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
YLH + ++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE
Sbjct: 154 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPE 209
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 345
LS S + DV+ G ++ L+ G+ F+ + L
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 244
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 142 ILGRGGFGK-----------VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV 190
LG+GGF K V+ G++ SL+ +E + E+ +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE--------KMSMEISIHRSLA 75
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
H++++ GF +V S+ + R P +QI LG
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ---- 131
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
YLH + ++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE
Sbjct: 132 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPE 187
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 345
LS S + DV+ G ++ L+ G+ F+ + L
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 142 ILGRGGFGK-----------VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV 190
LG+GGF K V+ G++ SL+ +E + E+ +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE--------KMSMEISIHRSLA 99
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
H++++ GF +V S+ + R P +QI LG
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ---- 155
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
YLH + ++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE
Sbjct: 156 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPE 211
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 345
LS S + DV+ G ++ L+ G+ F+ + L
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 246
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 142 ILGRGGFGK-----------VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV 190
LG+GGF K V+ G++ SL+ +E + E+ +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE--------KMSMEISIHRSLA 75
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
H++++ GF +V S+ + R P +QI LG
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ---- 131
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
YLH + ++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE
Sbjct: 132 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPE 187
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 345
LS S + DV+ G ++ L+ G+ F+ + L
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 142 ILGRGGFGK-----------VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV 190
LG+GGF K V+ G++ SL+ +E + E+ +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE--------KMSMEISIHRSLA 79
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
H++++ GF +V S+ + R P +QI LG
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ---- 135
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
YLH + ++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE
Sbjct: 136 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPE 191
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 345
LS S + DV+ G ++ L+ G+ F+ + L
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 142 ILGRGGFGK-----------VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV 190
LG+GGF K V+ G++ SL+ +E + E+ +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE--------KMSMEISIHRSLA 73
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
H++++ GF +V S+ + R P +QI LG
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ---- 129
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
YLH + ++IHRD+K N+ L+E+ E +GDFGLA ++Y D + GT +IAPE
Sbjct: 130 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPE 185
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 345
LS S + DV+ G ++ L+ G+ F+ + L
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 220
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 20/210 (9%)
Query: 141 NILGRGGFGKVYKGRLT--DGS--LVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLL 195
ILG G FG V +G L DG+ VAVK +K + + E++ F +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 196 RLRGFCMTPTER-----LLVYPFMVNGSVASCLR----ERGQSQPPLNWSVRKQIALGAA 246
RL G C+ + + +++ PFM G + + L E G PL ++ + + A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI--A 157
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV-RGTIG 305
G+ YL + +HRD+ A N +L ++ V DFGL+K + D + + + +
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
IA E L+ + K+DV+ +GV + E+ T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G+G FG V G G+ VAVK +K + T F E +++ H NL++L G +
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 203 TPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
L +V +M GS+ LR RG+S L + +L + YL + +
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGN---NFV 130
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+ A N+L+ E+ A V DFGL K V+ T APE L S K+
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFSTKS 186
Query: 322 DVFGYGVMLLELITGQR 338
DV+ +G++L E+ + R
Sbjct: 187 DVWSFGILLWEIYSFGR 203
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS- 187
+N LG G FGKV + D L VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQ------PPLNWSVRKQI 241
+ H N++ L G C L++ + G + + LR + ++ PL
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAV 300
+ A+G+A+L IHRDV A N+LL A +GDFGLA+ +M+ + V
Sbjct: 166 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
R + +APE + + ++DV+ YG++L E+ +
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS- 187
+N LG G FGKV + D L VAVK LK + +E++++S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQ------PPLNWSVRKQI 241
+ H N++ L G C L++ + G + + LR + ++ PL
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAV 300
+ A+G+A+L IHRDV A N+LL A +GDFGLA+ +M+ + V
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
R + +APE + + ++DV+ YG++L E+ +
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 119 LGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL 177
LG ++ ++ + D + R++LG G F +V LVA+K + +E +G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 178 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSV 237
+ E+ ++ H N++ L + L+ + G + + E+G ++
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG------FYTE 115
Query: 238 R--KQIALGAARGLAYLHDHCDPKIIHRDVKAANIL---LDEEFEAVVGDFGLAKLMDYK 292
R ++ + YLHD I+HRD+K N+L LDE+ + ++ DFGL+K+ D
Sbjct: 116 RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-- 170
Query: 293 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
V + GT G++APE L+ S+ D + GV+ L+ G F
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 21/228 (9%)
Query: 122 LKRFSLRELQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQ 180
L L L+ F ++G G +G+VYKGR + G L A+K + + T E + +
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM--DVTGDEEEEIK 68
Query: 181 TEVEMIS-MAVHRNLLRLRGFCMTPT------ERLLVYPFMVNGSVASCLRERGQSQPPL 233
E+ M+ + HRN+ G + + LV F GSV ++ +
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 234 NWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 293
W I RGL++LH H K+IHRD+K N+LL E E + DFG++ +D
Sbjct: 129 EWIA--YICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
Query: 294 THVTTAVRGTIGHIAPEYLSTGKSSE-----KTDVFGYGVMLLELITG 336
T + GT +APE ++ ++ + K+D++ G+ +E+ G
Sbjct: 184 GRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 119 LGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL 177
LG ++ ++ + D + R++LG G F +V LVA+K + +E +G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 178 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSV 237
+ E+ ++ H N++ L + L+ + G + + E+G ++
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG------FYTE 115
Query: 238 R--KQIALGAARGLAYLHDHCDPKIIHRDVKAANIL---LDEEFEAVVGDFGLAKLMDYK 292
R ++ + YLHD I+HRD+K N+L LDE+ + ++ DFGL+K+ D
Sbjct: 116 RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-- 170
Query: 293 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
V + GT G++APE L+ S+ D + GV+ L+ G F
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 46/291 (15%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--------GAA 246
L G C P L+V F G++++ LR + P + + L A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--VRGTI 304
+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDI-YKDPDYVRKGDARLPL 210
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXX 363
+APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL---------- 260
Query: 364 XXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 261 ----------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 119 LGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL 177
LG ++ ++ + D + R++LG G F +V LVA+K + +E +G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 178 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSV 237
+ E+ ++ H N++ L + L+ + G + + E+G ++
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG------FYTE 115
Query: 238 R--KQIALGAARGLAYLHDHCDPKIIHRDVKAANIL---LDEEFEAVVGDFGLAKLMDYK 292
R ++ + YLHD I+HRD+K N+L LDE+ + ++ DFGL+K+ D
Sbjct: 116 RDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-- 170
Query: 293 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
V + GT G++APE L+ S+ D + GV+ L+ G F
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGEL--QFQTEVEMI 186
+V ++ + LG G FGKV G +LT G VAVK L ++ + ++ + + E++ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
+ H ++++L TPT+ +V ++ G + + + G+ + + +QI
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL---- 121
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
+ Y H H ++HRD+K N+LLD A + DFGL+ +M D G+ +
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSCGSPNY 176
Query: 307 IAPEYLSTGK--SSEKTDVFGYGVMLLELITGQRAFD 341
APE +S G+ + + D++ GV+L L+ G FD
Sbjct: 177 AAPEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 194 LLRLRGFCMTPTERL-LVYPFM----VNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
++RLR F + E+ +VY + V +V R +++ L K R
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 308 APEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + + DV+ G +L EL+ GQ F
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGS-LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
F+ + +G+G FG+VYKG +VA+K + E + Q E+ ++S +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
R G + T+ ++ ++ GS L+ PL + I +GL YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPG-----PLEETYIATILREILKGLDYLHSE 135
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLST 314
+ IHRD+KAAN+LL E+ + + DFG+A + DT + GT +APE +
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 315 GKSSEKTDVFGYGVMLLELITGQ 337
K D++ G+ +EL G+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGE 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 31/217 (14%)
Query: 140 RNILGRGGFGKVYKGRLTDGSL---VAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLL 195
++++G G FG+V K R+ L A+KR+KE ++ F E+E++ + H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRER------------GQSQPPLNWSVRKQIAL 243
L G C L + +G++ LR+ + L+ A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
ARG+ YL + IHR++ A NIL+ E + A + DFGL++ + V+ T
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQE-------VYVKKT 196
Query: 304 IGHI-----APEYLSTGKSSEKTDVFGYGVMLLELIT 335
+G + A E L+ + +DV+ YGV+L E+++
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 203 TPTERLLVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
++ +M NG + + LRE R Q+Q L ++ + YL +
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQ 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 320 KTDVFGYGVMLLELIT 335
K+D++ +GV++ E+ +
Sbjct: 185 KSDIWAFGVLMWEIYS 200
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGEL--QFQTEVEMI 186
+V ++ + LG G FGKV G +LT G VAVK L ++ + ++ + + E++ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
+ H ++++L TPT+ +V ++ G + + + G+ + + +QI
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL---- 121
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
+ Y H H ++HRD+K N+LLD A + DFGL+ +M D G+ +
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPNY 176
Query: 307 IAPEYLSTGK--SSEKTDVFGYGVMLLELITGQRAFD 341
APE +S G+ + + D++ GV+L L+ G FD
Sbjct: 177 AAPEVIS-GRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 203 TPTERLLVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
++ +M NG + + LRE R Q+Q L ++ + YL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQ 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 320 KTDVFGYGVMLLELIT 335
K+D++ +GV++ E+ +
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 40/288 (13%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPPLNWSVRKQIAL--------GAA 246
L G C P L+V F G++++ LR + P + + L A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--VRGTI 304
+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPL 210
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXXX 363
+APE + + ++DV+ +GV+L E+ + G + ++ +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--------------- 255
Query: 364 XXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ + ++ Q L C G P +RP SE+V L
Sbjct: 256 --FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDG---SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
F+ +G+G FG+V+KG D +VA+K + E + Q E+ ++S
Sbjct: 24 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+ + G + T+ ++ ++ GS L E G PL+ + I +GL YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPG----PLDETQIATILREILKGLDYLH 136
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYL 312
K IHRD+KAAN+LL E E + DFG+A + DT + GT +APE +
Sbjct: 137 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVI 191
Query: 313 STGKSSEKTDVFGYGVMLLELITGQ 337
K D++ G+ +EL G+
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGE 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 203 TPTERLLVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
++ +M NG + + LRE R Q+Q L ++ + YL +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLESK---Q 140
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 320 KTDVFGYGVMLLELIT 335
K+D++ +GV++ E+ +
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 142 ILGR-GGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
I+G G FGKVYK + + S++A ++ + +++ + E+++++ H N+++L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 201 CMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
++ F G+V + + E + PL S + + L YLHD+ KI
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHDN---KI 129
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE- 319
IHRD+KA NIL + + + DFG++ + GT +APE + S +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 320 ----KTDVFGYGVMLLEL 333
K DV+ G+ L+E+
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEE--RTQGGELQFQTEVEMISMAV 190
+D + ILG GG +V+ R L D VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 191 HRNLLRL--RGFCMTPTERLLVYPFMVNGSV-ASCLRERGQSQPPLNWSVRKQIALGAAR 247
H ++ + G TP L P++V V LR+ ++ P+ ++ A +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 305
L + H + IIHRDVK ANIL+ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM--AVHRNLLRLRG 199
+ RG FG V+K +L + VAVK + Q +Q E E+ S+ H N+L+ G
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQS----WQNEYEVYSLPGMKHENILQFIG 85
Query: 200 F----CMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH-- 253
+ L+ F GS++ L+ ++W+ IA ARGLAYLH
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHED 140
Query: 254 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHI 307
D P I HRD+K+ N+LL A + DFGLA K K T GT ++
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 308 APEYLSTGKSSE-----KTDVFGYGVMLLELITGQRAFD 341
APE L + + + D++ G++L EL + A D
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 203 TPTERLLVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
++ +M NG + + LRE R Q+Q L ++ + YL +
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQ 120
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 320 KTDVFGYGVMLLELIT 335
K+D++ +GV++ E+ +
Sbjct: 181 KSDIWAFGVLMWEIYS 196
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 12/215 (5%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERT-QGGELQF-QTEVEMIS 187
+V +F+ +LG+G FGKV R L A+K LK++ Q +++ E +++
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 188 MAVHRNLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
+ L C +RL V ++ G + +++ G+ + P +I++G
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG-- 132
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
L +LH II+RD+K N++LD E + DFG+ K D T GT +
Sbjct: 133 --LFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK-EHMMDGVTTREFCGTPDY 186
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
IAPE ++ + D + YGV+L E++ GQ FD
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDG---SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
F+ +G+G FG+V+KG D +VA+K + E + Q E+ ++S
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+ + G + T+ ++ ++ GS L E G PL+ + I +GL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPG----PLDETQIATILREILKGLDYLH 121
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
K IHRD+KAAN+LL E E + DFG+A + T V GT +APE +
Sbjct: 122 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 177
Query: 314 TGKSSEKTDVFGYGVMLLELITGQ 337
K D++ G+ +EL G+
Sbjct: 178 QSAYDSKADIWSLGITAIELARGE 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 203 TPTERLLVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
++ +M NG + + LRE R Q+Q L ++ + YL +
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLESK---Q 140
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 320 KTDVFGYGVMLLELIT 335
K+D++ +GV++ E+ +
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 75
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 133 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 187
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 93
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 151 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 205
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 186
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 186
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 86
Query: 194 LLRLRGFCMTPTERL------LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
++RLR F + E+ LV + V +V R +++ L K R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGH 306
LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ + +
Sbjct: 146 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYY 200
Query: 307 IAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + + DV+ G +L EL+ GQ F
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 143 LGRGGFGKVYKGR--LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G + VYKG+ LTD +LVA+K ++ E +G EV ++ H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 201 CMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
T LV+ ++ + + L + G +N K RGLAY H K+
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNI---INMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE-YLSTGKSSE 319
+HRD+K N+L++E E + DFGLA+ V T+ + P+ L + S
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYST 180
Query: 320 KTDVFGYGVMLLELITGQRAF 340
+ D++G G + E+ TG+ F
Sbjct: 181 QIDMWGVGCIFYEMATGRPLF 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 203 TPTERLLVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
++ +M NG + + LRE R Q+Q L ++ + YL +
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQ 131
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 320 KTDVFGYGVMLLELIT 335
K+D++ +GV++ E+ +
Sbjct: 192 KSDIWAFGVLMWEIYS 207
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 82
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 140 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 194
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 86
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 144 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 198
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDG---SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
F+ +G+G FG+V+KG D +VA+K + E + Q E+ ++S
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+ + G + T+ ++ ++ GS L E G PL+ + I +GL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPG----PLDETQIATILREILKGLDYLH 121
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYL 312
K IHRD+KAAN+LL E E + DFG+A + DT + GT +APE +
Sbjct: 122 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVI 176
Query: 313 STGKSSEKTDVFGYGVMLLELITGQ 337
K D++ G+ +EL G+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGE 201
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 21/217 (9%)
Query: 143 LGRGGFGKV-YKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMISMAVHRNLLRLRGF 200
+G GGF KV + G +VA+K + ++ T G +L + +TE+E + H+++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 201 CMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
T + +V + G + + + + V +QI +AY+H
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIV----SAVAYVHSQ---GY 129
Query: 261 IHRDVKAANILLDEEFEAVVGDFGL-AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS-- 317
HRD+K N+L DE + + DFGL AK KD H+ T G++ + APE L GKS
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPE-LIQGKSYL 187
Query: 318 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 354
+ DV+ G++L L+ G FD DD+VM L
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFD------DDNVMAL 218
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 87
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 144
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 145 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 199
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDG---SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
F+ +G+G FG+V+KG D +VA+K + E + Q E+ ++S
Sbjct: 29 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+ + G + T+ ++ ++ GS L E G PL+ + I +GL YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPG----PLDETQIATILREILKGLDYLH 141
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYL 312
K IHRD+KAAN+LL E E + DFG+A + DT + GT +APE +
Sbjct: 142 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVI 196
Query: 313 STGKSSEKTDVFGYGVMLLELITGQ 337
K D++ G+ +EL G+
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGE 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG V G+ VA+K +KE E +F E +++ H L++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 203 TPTERLLVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
++ +M NG + + LRE R Q+Q L ++ + YL +
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL------EMCKDVCEAMEYLE---SKQ 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
+HRD+ A N L++++ V DFGL++ + + + + + PE L K S
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 320 KTDVFGYGVMLLELIT 335
K+D++ +GV++ E+ +
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 78
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 135
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 136 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 190
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 186
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 143 LGRGGFGKV--YKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG G FGKV Y T+ G +VAVK LKE +Q E+E++ H ++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA---ARGLAYL 252
+G C E+ LV ++ GS+ L P + Q+ L A G+AYL
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--------PRHCVGLAQLLLFAQQICEGMAYL 128
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GTIGHIA 308
H IHR + A N+LLD + +GDFGLAK + + H VR + A
Sbjct: 129 HAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDGDSPVFWYA 183
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELIT 335
PE L K +DV+ +GV L EL+T
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
DN ++GRG +G VYKG L D VAVK Q + + + + H N+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN--FINEKNIYRVPLMEHDNI 69
Query: 195 LRL-----RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
R R E LLV + NGS+ L S +W ++A RGL
Sbjct: 70 ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGL 124
Query: 250 AYLH------DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--------YKDTH 295
AYLH DH P I HRD+ + N+L+ + V+ DFGL+ + +D
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 296 VTTAVRGTIGHIAPEYLSTG-------KSSEKTDVFGYGVMLLELITGQRAFDL 342
+ V GTI ++APE L + ++ D++ G++ E+ R DL
Sbjct: 185 AISEV-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF--MRCTDL 235
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 143 LGRGGFGKV--YKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG G FGKV Y T+ G +VAVK LKE +Q E+E++ H ++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA---ARGLAYL 252
+G C E+ LV ++ GS+ L P + Q+ L A G+AYL
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL--------PRHCVGLAQLLLFAQQICEGMAYL 127
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GTIGHIA 308
H IHR + A N+LLD + +GDFGLAK + + H VR + A
Sbjct: 128 HAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDGDSPVFWYA 182
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELIT 335
PE L K +DV+ +GV L EL+T
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 108
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 166 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SR 220
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 38/293 (12%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
D++ + ++G G V VA+KR+ E+ Q + E++ +S H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRE---RGQSQP-PLNWSVRKQIALGAARGL 249
++ + E LV + GSV ++ +G+ + L+ S I GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM----DYKDTHVTTAVRGTIG 305
YLH + IHRDVKA NILL E+ + DFG++ + D V GT
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 306 HIAPEYLSTGKSSE-KTDVFGYGVMLLELITGQRAFD--------LARLANDDDVMLLDW 356
+APE + + + K D++ +G+ +EL TG + + L ND +
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL---- 247
Query: 357 VXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 409
D +M Y + ++I LC Q P +RP +E++R
Sbjct: 248 ---------ETGVQDKEMLKKY-GKSFRKMIS---LCLQKDPEKRPTAAELLR 287
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 143 LGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRNLLR 196
LG G FG V +G S VAVK LK + E F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L G +TP ++ V GS+ LR + Q + A+ A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLESK- 134
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 314
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 315 GKSSEKTDVFGYGVMLLELIT 335
S +D + +GV L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEE--RTQGGELQFQTEVEMISMAV 190
+D + ILG GG +V+ R L D VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 191 HRNLLRL--RGFCMTPTERLLVYPFMVNGSV-ASCLRERGQSQPPLNWSVRKQIALGAAR 247
H ++ + G TP L P++V V LR+ ++ P+ ++ A +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 305
L + H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 38/293 (12%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
D++ + ++G G V VA+KR+ E+ Q + E++ +S H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRE---RGQSQP-PLNWSVRKQIALGAARGL 249
++ + E LV + GSV ++ +G+ + L+ S I GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM----DYKDTHVTTAVRGTIG 305
YLH + IHRDVKA NILL E+ + DFG++ + D V GT
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 306 HIAPEYLSTGKSSE-KTDVFGYGVMLLELITGQRAFD--------LARLANDDDVMLLDW 356
+APE + + + K D++ +G+ +EL TG + + L ND +
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL---- 242
Query: 357 VXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 409
D +M Y + ++I LC Q P +RP +E++R
Sbjct: 243 ---------ETGVQDKEMLKKY-GKSFRKMIS---LCLQKDPEKRPTAAELLR 282
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVE--M 185
++++ ++F +LG+G FGKV+ A+K LK++ + T VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 186 ISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
+S+A L FC T+ L F++ L QS + S A
Sbjct: 72 LSLAWEHPFLT-HMFCTFQTKENLF--FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 128
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 305
GL +LH I++RD+K NILLD++ + DFG+ K D T GT
Sbjct: 129 ILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPD 184
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+IAPE L K + D + +GV+L E++ GQ F
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 108
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 165
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 166 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 220
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 79
Query: 194 LLRLRGFCMTPTERL------LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
++RLR F + E+ LV + V +V R +++ L K R
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGH 306
LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ + +
Sbjct: 139 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYY 193
Query: 307 IAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + + DV+ G +L EL+ GQ F
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEE--RTQGGELQFQTEVEMISMAV 190
+D + ILG GG +V+ R L D VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 191 HRNLLRL--RGFCMTPTERLLVYPFMVNGSV-ASCLRERGQSQPPLNWSVRKQIALGAAR 247
H ++ + G TP L P++V V LR+ ++ P+ ++ A +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 305
L + H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
D + R++LG G F +V LVA+K + ++ +G E + E+ ++ H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVR--KQIALGAARGLAY 251
++ L + L+ + G + + E+G ++ R ++ + Y
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG------FYTERDASRLIFQVLDAVKY 131
Query: 252 LHDHCDPKIIHRDVKAANIL---LDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
LHD I+HRD+K N+L LDE+ + ++ DFGL+K+ D V + GT G++A
Sbjct: 132 LHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLSTACGTPGYVA 186
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE L+ S+ D + GV+ L+ G F
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 110
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 167
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 168 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 222
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 102
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 159
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 160 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 214
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 143 LGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRNLLR 196
LG G FG V +G S VAVK LK + E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L G +TP ++ V GS+ LR + Q + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLESK- 130
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 314
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 315 GKSSEKTDVFGYGVMLLELIT 335
S +D + +GV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 112
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 169
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 170 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 224
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 143 LGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRNLLR 196
LG G FG V +G S VAVK LK + E F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L G +TP ++ V GS+ LR + Q + A+ A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLESK- 140
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 314
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 315 GKSSEKTDVFGYGVMLLELIT 335
S +D + +GV L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+++R + ELQ +++ H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 153
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 210
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 211 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 265
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 143 LGRGGFGKVYK-GRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRL--R 198
+G G +G+ K R +DG ++ K L E Q +EV ++ H N++R R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCD- 257
T T +V + G +AS + + + + L+ ++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 258 -PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 316
++HRD+K AN+ LD + +GDFGLA+++++ DT A GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 317 SSEKTDVFGYGVMLLEL 333
+EK+D++ G +L EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 102/227 (44%), Gaps = 40/227 (17%)
Query: 143 LGRGGFGKV--YKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG GGF V +G L DG A+KR+ Q E + Q E +M + H N+LRL +
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDRE-EAQREADMHRLFNHPNILRLVAY 94
Query: 201 CM----TPTERLLVYPFMVNGSV---ASCLRERGQSQPPLNWSVRKQIA---LGAARGLA 250
C+ E L+ PF G++ L+++G N+ QI LG RGL
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG------NFLTEDQILWLLLGICRGLE 148
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-----------TA 299
+H HRD+K NILL +E + V+ D G M+ HV A
Sbjct: 149 AIHA---KGYAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAA 202
Query: 300 VRGTIGHIAPEYLSTGKSS---EKTDVFGYGVMLLELITGQRAFDLA 343
R TI + APE S E+TDV+ G +L ++ G+ +D+
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 143 LGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRNLLR 196
LG G FG V +G S VAVK LK + E F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L G +TP ++ V GS+ LR + Q + A+ A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLESK- 134
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 314
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 315 GKSSEKTDVFGYGVMLLELIT 335
S +D + +GV L E+ T
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 143 LGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRNLLR 196
LG G FG V +G S VAVK LK + E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L G +TP ++ V GS+ LR + Q + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLESK- 130
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 314
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 315 GKSSEKTDVFGYGVMLLELIT 335
S +D + +GV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 143 LGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRNLLR 196
LG G FG V +G S VAVK LK + E F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L G +TP ++ V GS+ LR + Q + A+ A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLESK- 140
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 314
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 315 GKSSEKTDVFGYGVMLLELIT 335
S +D + +GV L E+ T
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 143 LGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQ--FQTEVEMISMAVHRNLLR 196
LG G FG V +G S VAVK LK + E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L G +TP ++ V GS+ LR + Q + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLESK- 130
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI--GHIAPEYLST 314
+ IHRD+ A N+LL +GDFGL + + D H + APE L T
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 315 GKSSEKTDVFGYGVMLLELIT 335
S +D + +GV L E+ T
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 135 DNFSNRNILGRGGFGKV-----YKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMIS- 187
+N +LG G FGKV Y T S+ VAVK LKE+ +E++M++
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ--SQPPLNWSVRKQI---- 241
+ H N++ L G C L++ + G + + LR + + S+ + + +K++
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 242 -------------ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK- 287
A A+G+ +L +HRD+ A N+L+ + DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 288 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+M + V R + +APE L G + K+DV+ YG++L E+ +
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVE--M 185
++++ ++F +LG+G FGKV+ A+K LK++ + T VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 186 ISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
+S+A L FC T+ L F++ L QS + S A
Sbjct: 71 LSLAWEHPFLT-HMFCTFQTKENLF--FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 127
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 305
GL +LH I++RD+K NILLD++ + DFG+ K D T GT
Sbjct: 128 ILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPD 183
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+IAPE L K + D + +GV+L E++ GQ F
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 124/295 (42%), Gaps = 50/295 (16%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPP------------LNWSVRKQIA 242
L G C P L+V F G++++ LR + P L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 300
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDXVRKGDA 210
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 359
R + +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------ 264
Query: 360 XXXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 265 --------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS- 187
+N LG G FGKV + D L VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERG---QSQPPL-----NWSVRK 239
+ H N++ L G C L++ + G + + LR + ++ P S R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 240 QIALGA--ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHV 296
+ + A+G+A+L IHRDV A N+LL A +GDFGLA+ +M+ + V
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 297 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
R + +APE + + ++DV+ YG++L E+ +
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 32/221 (14%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMA--VHRNLLRL-- 197
I RG FG V+K +L + VAVK + Q +Q+E E+ S H NLL+
Sbjct: 22 IKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQS----WQSEREIFSTPGMKHENLLQFIA 76
Query: 198 ---RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
RG + E L+ F GS+ L+ + W+ +A +RGL+YLH+
Sbjct: 77 AEKRGSNLE-VELWLITAFHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLHE 130
Query: 255 HC--------DPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIG 305
P I HRD K+ N+LL + AV+ DFGLA + K T GT
Sbjct: 131 DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRR 190
Query: 306 HIAPEYLSTGKSSE-----KTDVFGYGVMLLELITGQRAFD 341
++APE L + + + D++ G++L EL++ +A D
Sbjct: 191 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FGKVYK + + +A ++ E +++ + E+E+++ H +++L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 203 TPTERLLVYPFMVNGSVASCLRE--RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
+ ++ F G+V + + E RG ++P + R+ + L +LH +I
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 130
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 316
IHRD+KA N+L+ E + + DFG++ K + +D+ + T + E +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 317 SSEKTDVFGYGVMLLEL 333
K D++ G+ L+E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPP------------LNWSVRKQIA 242
L G C P L+V F G++++ LR + P L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 300
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 210
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 359
R + +APE + + ++DV+ +GV+L E+ + G + ++ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----------- 259
Query: 360 XXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ + ++ Q L C G P +RP SE+V L
Sbjct: 260 ------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 124/295 (42%), Gaps = 50/295 (16%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 196 RLRGFCMTPTERLLVYP-FMVNGSVASCLRERGQSQPP------------LNWSVRKQIA 242
L G C P L+V F G++++ LR + P L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 300
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 201
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 359
R + +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------ 255
Query: 360 XXXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 256 --------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 124/295 (42%), Gaps = 50/295 (16%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 196 RLRGFCMTPTERLLVYP-FMVNGSVASCLRERGQSQPP------------LNWSVRKQIA 242
L G C P L+V F G++++ LR + P L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 300
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 201
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 359
R + +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------ 255
Query: 360 XXXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 256 --------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 124/295 (42%), Gaps = 50/295 (16%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPP------------LNWSVRKQIA 242
L G C P L+V F G++++ LR + P L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 300
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 212
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 359
R + +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------ 266
Query: 360 XXXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 267 --------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS- 187
+N LG G FGKV + D L VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERG---QSQPPL-----NWSVRK 239
+ H N++ L G C L++ + G + + LR + ++ P S R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 240 QIALGA--ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHV 296
+ + A+G+A+L IHRDV A N+LL A +GDFGLA+ +M+ + V
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 297 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
R + +APE + + ++DV+ YG++L E+ +
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 143 LGRGGFGKVYKGRLTDGSL-VAVK------RLKEERTQGGELQFQTEVEMISMAVHRNLL 195
LG GG VY T ++ VA+K R KEE + +F+ EV S H+N++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK----RFEREVHNSSQLSHQNIV 74
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ + E Y ++ L E +S PL+ G+ + HD
Sbjct: 75 SM----IDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
+I+HRD+K NIL+D + DFG+AK + T V GT+ + +PE
Sbjct: 131 ---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 316 KSSEKTDVFGYGVMLLELITGQRAFD 341
+ E TD++ G++L E++ G+ F+
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FGKVYK + + +A ++ E +++ + E+E+++ H +++L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 203 TPTERLLVYPFMVNGSVASCLRE--RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
+ ++ F G+V + + E RG ++P + R+ + L +LH +I
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 138
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLA----KLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 316
IHRD+KA N+L+ E + + DFG++ K + +D+ + T + E +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 317 SSEKTDVFGYGVMLLEL 333
K D++ G+ L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 134/297 (45%), Gaps = 37/297 (12%)
Query: 143 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGF 200
+G G FGK + T DG +K + R E + + EV +++ H N+++ R
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERG---QSQPPLNWSVRKQIALGAARGLAYLHDHC 256
+V + G + + ++G Q L+W V QI L L ++HD
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV--QICLA----LKHVHDR- 144
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 316
KI+HRD+K+ NI L ++ +GDFG+A++++ + A GT +++PE
Sbjct: 145 --KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICENKP 201
Query: 317 SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEG 376
+ K+D++ G +L EL T + AF+ + N ++L + D
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKN----LVLKIISGSFPPVSLHYSYD----- 252
Query: 377 NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDF 433
+ V QL + +P +RP ++ + LE +A+R E++ ++ ++F
Sbjct: 253 --LRSLVSQLF-------KRNPRDRPSVNSI---LEKGFIAKRIEKFLSPQLIAEEF 297
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 41/235 (17%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISM 188
L+ A+D F +LG+G FG+V K R D A+K+++ T+ +EV +++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLAS 58
Query: 189 AVHRNLLRL-------RGFC--MTPTER----LLVYPFMVNGSVASCLR-ERGQSQPPLN 234
H+ ++R R F MT ++ + + NG++ + E Q
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 235 WSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK------- 287
W + +QI L+Y+H IIHRD+K NI +DE +GDFGLAK
Sbjct: 119 WRLFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 288 --LMDYKDT-----HVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELI 334
+D ++ ++T+A+ GT ++A E L TG +EK D++ G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 12/213 (5%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISM 188
V +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H N+++L T + LV+ F+ + + + + PL + K +G
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQG 119
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
LA+ H H +++HRD+K N+L++ E + DFGLA+ T V T+ + A
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRA 175
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS- 187
+N LG G FGKV + D L VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP-LNWSVRK------- 239
+ H N++ L G C L++ + G + + LR + +PP L +S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK---RPPGLEYSYNPSHNPEEQ 162
Query: 240 -------QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDY 291
+ A+G+A+L IHRDV A N+LL A +GDFGLA+ +M+
Sbjct: 163 LSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 292 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ V R + +APE + + ++DV+ YG++L E+ +
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPP------------LNWSVRKQIA 242
L G C P L+V F G++++ LR + P L +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA--V 300
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 247
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 359
R + +APE + + ++DV+ +GV+L E+ + G + ++ +
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----------- 296
Query: 360 XXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ + ++ Q L C G P +RP SE+V L
Sbjct: 297 ------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 20/232 (8%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMIS 187
+A ++ ILG G FG+VY+G T+ VAVK K++ T + +F +E ++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 188 MAVHRNLLRLRGFCMT-PTERLL-VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
H ++++L G PT ++ +YP+ G + L S L + +L
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWIIMELYPY---GELGHYLERNKNSLKVLTLVLY---SLQI 118
Query: 246 ARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
+ +AYL +C +HRD+ NIL+ +GDFGL++ ++ +D + + R I
Sbjct: 119 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 174
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLD 355
++PE ++ + + +DV+ + V + E+++ G++ F L N D + +L+
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF--FWLENKDVIGVLE 224
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 118
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 174
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 143 LGRGGFGKVYK-GRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRL--R 198
+G G +G+ K R +DG ++ K L E Q +EV ++ H N++R R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCD- 257
T T +V + G +AS + + + + L+ ++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 258 -PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 316
++HRD+K AN+ LD + +GDFGLA+++++ DT GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKTFVGTPYYMSPEQMNRMS 192
Query: 317 SSEKTDVFGYGVMLLEL 333
+EK+D++ G +L EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 143 LGRGGFGKV--YKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG G FGKV Y T+ G +VAVK LK + ++ E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRER--GQSQPPLNWSVRKQIALGAARGLAYLH 253
+G C E+ LV ++ GS+ L G +Q L A G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-------FAQQICEGMAYLH 134
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GTIGHIAP 309
IHR++ A N+LLD + +GDFGLAK + + H VR + AP
Sbjct: 135 SQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDGDSPVFWYAP 189
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELIT 335
E L K +DV+ +GV L EL+T
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEM 185
L+E + + ++G+G FG+VY GR VA++ + ER +L+ F+ EV
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMA 82
Query: 186 ISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
H N++ G CM+P ++ ++ S +R+ ++ L+ + +QIA
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEI 139
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---- 301
+G+ YLH I+H+D+K+ N+ D + V+ DFGL + + V A R
Sbjct: 140 VKGMGYLHAK---GILHKDLKSKNVFYDNG-KVVITDFGL-----FSISGVLQAGRREDK 190
Query: 302 -----GTIGHIAPEYLSTGKS---------SEKTDVFGYGVMLLEL 333
G + H+APE + S+ +DVF G + EL
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 118
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 174
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 117
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 173
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 20/232 (8%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMIS 187
+A ++ ILG G FG+VY+G T+ VAVK K++ T + +F +E ++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 188 MAVHRNLLRLRGFCMT-PTERLL-VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
H ++++L G PT ++ +YP+ G + L S L + +L
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIMELYPY---GELGHYLERNKNSLKVLTLVLY---SLQI 122
Query: 246 ARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
+ +AYL +C +HRD+ NIL+ +GDFGL++ ++ +D + + R I
Sbjct: 123 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLD 355
++PE ++ + + +DV+ + V + E+++ G++ F L N D + +L+
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF--FWLENKDVIGVLE 228
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 117
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 173
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 117
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
A+ H H +++HRD+K N+L++ E + DFGLA+ T V T+ + AP
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 173
Query: 310 EYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
E L K S D++ G + E++T + F
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 125
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 181
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 125
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 181
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 119/289 (41%), Gaps = 40/289 (13%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPP----------LNWSVRKQIALG 244
L G C P L+V F G++++ LR + P L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRGT 303
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXXX 362
+ +APE + + ++DV+ +GV+L E+ + G + ++ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------------- 259
Query: 363 XXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ + ++ Q L C G P +RP SE+V L
Sbjct: 260 ---FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 117/232 (50%), Gaps = 20/232 (8%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGELQFQTEVEMIS 187
+A ++ ILG G FG+VY+G T+ VAVK K++ T + +F +E ++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 188 MAVHRNLLRLRGFCMT-PTERLL-VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
H ++++L G PT ++ +YP+ G + L S L + +L
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWIIMELYPY---GELGHYLERNKNSLKVLTLVLY---SLQI 134
Query: 246 ARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
+ +AYL +C +HRD+ NIL+ +GDFGL++ ++ +D + + R I
Sbjct: 135 CKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 190
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLD 355
++PE ++ + + +DV+ + V + E+++ G++ F L N D + +L+
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF--FWLENKDVIGVLE 240
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 118
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 174
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 136 NFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
F +LG G F +V+ K RLT G L A+K +K+ + + E+ ++ H N
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHEN 67
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
++ L + T LV + G + + ERG + S+ Q L A + YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK-DASLVIQQVLSAVK---YLH 123
Query: 254 DHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
++ I+HRD+K N+L +E + ++ DFGL+K+ + + + GT G++APE
Sbjct: 124 EN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPE 177
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ S+ D + GV+ L+ G F
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 112/212 (52%), Gaps = 17/212 (8%)
Query: 136 NFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQGGE-LQFQTEVEMISMAV 190
+F +LG+G FGKV+ R G L A+K LK+ + + ++ + E ++++
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAARGL 249
H +++L T + L+ F+ G + + L +E ++ + + + ++ALG L
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-AELALG----L 143
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIA 308
+LH II+RD+K NILLDEE + DFGL+K +D++ + GT+ ++A
Sbjct: 144 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--GTVEYMA 198
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE ++ S D + YGV++ E++TG F
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 47/293 (16%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPP-----------LNWSVRKQIAL 243
L G C P L+V F G++++ LR + P L +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VRG 302
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 303 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXXX 361
+ +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-------- 264
Query: 362 XXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 265 ------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 143 LGRGGFGKV--YKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG G FGKV Y T+ G +VAVK LK + ++ E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 198 RGFCMTPTER--LLVYPFMVNGSVASCLRER--GQSQPPLNWSVRKQIALGAARGLAYLH 253
+G C E+ LV ++ GS+ L G +Q L A G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-------FAQQICEGMAYLH 134
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GTIGHIAP 309
IHR++ A N+LLD + +GDFGLAK + + H VR + AP
Sbjct: 135 AQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDGDSPVFWYAP 189
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELIT 335
E L K +DV+ +GV L EL+T
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS- 187
+N LG G FGKV + D L VAVK LK + +E++++S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQ----------------- 230
+ H N++ L G C L++ + G + + LR + ++
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 231 --PPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK- 287
PL + A+G+A+L IHRDV A N+LL A +GDFGLA+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 288 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+M+ + V R + +APE + + ++DV+ YG++L E+ +
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+ + + ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD------HCN 74
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPATVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 188 -YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL--LRLRG 199
LG+GGF K Y+ +TD V K Q E +A+H++L + G
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 200 FCMTPTERLLVYPFMVNGSVASCL----RERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
F + VY + S L R + ++P + +R+ I +G+ YLH++
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN 161
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
++IHRD+K N+ L+++ + +GDFGLA +++ D + GT +IAPE L
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKTLCGTPNYIAPEVLCKK 217
Query: 316 KSSEKTDVFGYGVMLLELITGQRAFDLARL 345
S + D++ G +L L+ G+ F+ + L
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL--LRLRG 199
LG+GGF K Y+ +TD V K Q E +A+H++L + G
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 200 FCMTPTERLLVYPFMVNGSVASCL----RERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
F + VY + S L R + ++P + +R+ I +G+ YLH++
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN 161
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
++IHRD+K N+ L+++ + +GDFGLA +++ D + GT +IAPE L
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKXLCGTPNYIAPEVLCKK 217
Query: 316 KSSEKTDVFGYGVMLLELITGQRAFDLARL 345
S + D++ G +L L+ G+ F+ + L
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 97/207 (46%), Gaps = 27/207 (13%)
Query: 143 LGRGGFGKV--YKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG G FGKV Y T+ G +VAVK LK + ++ E++++ H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 198 RGFC--MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA---ARGLAYL 252
+G C LV ++ GS+ L P + Q+ L A G+AYL
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL--------PRHSIGLAQLLLFAQQICEGMAYL 150
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GTIGHIA 308
H IHRD+ A N+LLD + +GDFGLAK + + H VR + A
Sbjct: 151 HAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV--PEGHEXYRVREDGDSPVFWYA 205
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELIT 335
PE L K +DV+ +GV L EL+T
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 24/225 (10%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEM 185
L E D +R +LG+G +G VY GR L++ +A+K + E ++ + E+ +
Sbjct: 14 LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIAL 72
Query: 186 ISMAVHRNLLRLRGFCMTPTERLLVYPFM---VNGSVASCLRERGQSQPPLNWSV---RK 239
H+N+++ G + +E + FM GS+++ LR + ++ K
Sbjct: 73 HKHLKHKNIVQYLG---SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 129
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV--VGDFGLAKLMDYKDTHVT 297
QI GL YLHD+ +I+HRD+K N+L++ + V + DFG +K + + T
Sbjct: 130 QI----LEGLKYLHDN---QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CT 180
Query: 298 TAVRGTIGHIAPEYLSTGKS--SEKTDVFGYGVMLLELITGQRAF 340
GT+ ++APE + G + D++ G ++E+ TG+ F
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + + PL + K +GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPL--PLIKSYLFQLLQGL 119
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 10/213 (4%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLK-EERTQGGELQFQTEVEMISM 188
Q + + +G G +G VYK + + G +VA+KR++ + +G E+ ++
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H N++ L + LV+ FM + L E ++ L S K RG
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDE---NKTGLQDSQIKIYLYQLLRG 131
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
+A+ H H +I+HRD+K N+L++ + + DFGLA+ T V T+ + A
Sbjct: 132 VAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRA 187
Query: 309 PEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
P+ L + K S D++ G + E+ITG+ F
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 137 FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
F+ +G+G FG+V+KG +VA+K + E + Q E+ ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ G + ++ ++ ++ GS LR P + + +GL YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHSE 139
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
K IHRD+KAAN+LL E+ + + DFG+A + T V GT +APE +
Sbjct: 140 ---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQS 195
Query: 316 KSSEKTDVFGYGVMLLELITGQ 337
K D++ G+ +EL G+
Sbjct: 196 AYDSKADIWSLGITAIELAKGE 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 119/291 (40%), Gaps = 42/291 (14%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPP------------LNWSVRKQIA 242
L G C P L+V F G++++ LR + P L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VR 301
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXX 360
+ +APE + + ++DV+ +GV+L E+ + G + ++ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------------ 259
Query: 361 XXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ + ++ Q L C G P +RP SE+V L
Sbjct: 260 -----FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 140 RNILGRGGFGKV-YKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEM--ISMAVHRNLLR 196
R LG G FGKV VA+K + + + ++ + E E+ + + H ++++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L TPT+ ++V + G + + E+ + +QI + Y H H
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA----IEYCHRH- 127
Query: 257 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 316
KI+HRD+K N+LLD+ + DFGL+ +M D + G+ + APE ++ GK
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVIN-GK 182
Query: 317 --SSEKTDVFGYGVMLLELITGQRAFD 341
+ + DV+ G++L ++ G+ FD
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 10/213 (4%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLK-EERTQGGELQFQTEVEMISM 188
Q + + +G G +G VYK + + G +VA+KR++ + +G E+ ++
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H N++ L + LV+ FM + L E ++ L S K RG
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDE---NKTGLQDSQIKIYLYQLLRG 131
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
+A+ H H +I+HRD+K N+L++ + + DFGLA+ T V T+ + A
Sbjct: 132 VAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRA 187
Query: 309 PEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
P+ L + K S D++ G + E+ITG+ F
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GL++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLSF 118
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 174
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL--LRLRG 199
LG+GGF K Y+ +TD V K Q E +A+H++L + G
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 200 FCMTPTERLLVYPFMVNGSVASCL----RERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
F + VY + S L R + ++P + +R+ I +G+ YLH++
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN 161
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
++IHRD+K N+ L+++ + +GDFGLA +++ D + GT +IAPE L
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEVLCKK 217
Query: 316 KSSEKTDVFGYGVMLLELITGQRAFDLARL 345
S + D++ G +L L+ G+ F+ + L
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 48/294 (16%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 196 RLRGFCMTPTERLLVYP-FMVNGSVASCLRERGQSQPP------------LNWSVRKQIA 242
L G C P L+V F G++++ LR + P L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VR 301
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXX 360
+ +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------- 255
Query: 361 XXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 256 -------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL--LRLRG 199
LG+GGF K Y+ +TD V K Q E +A+H++L + G
Sbjct: 33 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 200 FCMTPTERLLVYPFMVNGSVASCL----RERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
F + VY + S L R + ++P + +R+ I +G+ YLH++
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN 145
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
++IHRD+K N+ L+++ + +GDFGLA +++ D + GT +IAPE L
Sbjct: 146 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEVLCKK 201
Query: 316 KSSEKTDVFGYGVMLLELITGQRAFDLARL 345
S + D++ G +L L+ G+ F+ + L
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFETSCL 231
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 118
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 48/294 (16%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 196 RLRGFCMTPTERLLVY-PFMVNGSVASCLRERGQSQPP------------LNWSVRKQIA 242
L G C P L+V F G++++ LR + P L +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-VR 301
A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXXX 360
+ +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL------- 255
Query: 361 XXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 256 -------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 118
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 119 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 117
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPE 310
H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPE 172
Query: 311 YLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 117
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPE 310
H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPE 172
Query: 311 YLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPL--PLIKSYLFQLLQGL 116
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 117 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 117
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 172
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 119
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 118
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 117
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 172
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 27/240 (11%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEM----- 185
+AT + +G G +G VYK R G VA+K ++ + G L T E+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEG-LPISTVREVALLRR 59
Query: 186 ISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP--LNWSVRKQIAL 243
+ H N++RL C T + +V V LR PP L K +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
RGL +LH +C I+HRD+K NIL+ + DFGLA++ Y+ V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--T 174
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ-------------RAFDLARLANDDD 350
+ + APE L + D++ G + E+ + + FDL L +DD
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 119
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPE 310
H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + APE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPE 174
Query: 311 YLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ +G+G F KV R + G VAVK + + + LQ EV ++ + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T LV + G V L G W K+ A R +
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-------WMKEKE-ARAKFRQIVSAV 119
Query: 254 DHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+C K I+HRD+KA N+LLD + + DFG + + + T G+ + APE L
Sbjct: 120 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-L 176
Query: 313 STGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 119
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 120
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 175
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ V+ + + + + PL + K +GLA+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEH-VHQDLKTFMDASALTGIPL--PLIKSYLFQLLQGLAF 117
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 173
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 27/240 (11%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEM----- 185
+AT + +G G +G VYK R G VA+K ++ + G L T E+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEG-LPISTVREVALLRR 59
Query: 186 ISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP--LNWSVRKQIAL 243
+ H N++RL C T + +V V LR PP L K +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
RGL +LH +C I+HRD+K NIL+ + DFGLA++ Y+ V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--T 174
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ-------------RAFDLARLANDDD 350
+ + APE L + D++ G + E+ + + FDL L +DD
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 119
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 120 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 117
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 172
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPL--PLIKSYLFQLLQGL 118
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 173
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 18/229 (7%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLT--DGSLV--AVKRLKEERTQGGELQ-FQT 181
L ++ + F+ +LG+G FG V + +L DGS V AVK LK + +++ F
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTER------LLVYPFMVNGSVASCLRERGQSQPPLNW 235
E + H ++ +L G + + +++ PFM +G + + L + P N
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 236 SVRK--QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 293
++ + + A G+ YL IHRD+ A N +L E+ V DFGL++ + D
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 294 THVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
+ A + + +A E L+ + +DV+ +GV + E++T GQ +
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ F+ + + + + PL + K +GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPL--PLIKSYLFQLLQGL 119
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+ + + ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD------HCN 74
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 186
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+ +++ + T+G E+ ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 118
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 174
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVH 191
+NF +G G +G VYK R LT G +VA+ +++ + T+G E+ ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+++L T + LV+ F+ + + + + PL + K +GLA+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAF 117
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
H H +++HRD+K N+L++ E + DFGLA+ T V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 173
Query: 312 LSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
L K S D++ G + E++T + F
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEE--RTQGGELQFQTEVEMISMAV 190
+D + ILG GG +V+ R L VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 191 HRNLLRL--RGFCMTPTERLLVYPFMVNGSV-ASCLRERGQSQPPLNWSVRKQIALGAAR 247
H ++ + G TP L P++V V LR+ ++ P+ ++ A +
Sbjct: 71 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 305
L + H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTD-GSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 193
++++ ++G G FG VY+ +L D G LVA+K+ L+ + + ELQ +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD------HCN 74
Query: 194 LLRLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
++RLR F + E+ +L Y V +V R +++ L K
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDY---VPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTI 304
R LAY+H I HRD+K N+LLD + + + DFG AK + + +V+ +
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SR 186
Query: 305 GHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE + + DV+ G +L EL+ GQ F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVK--RLKEERTQGGELQFQTEVEM--- 185
+AT + +G G +G VYK R G VA+K R+ GG L T E+
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 186 --ISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP--LNWSVRKQI 241
+ H N++RL C T + +V V LR PP L K +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
RGL +LH +C I+HRD+K NIL+ + DFGLA++ Y+ T V
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--MALTPVV 180
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ-------------RAFDLARLAND 348
T+ + APE L + D++ G + E+ + + FDL L +
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
Query: 349 DD 350
DD
Sbjct: 241 DD 242
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 136 NFSNRNILGRGGFGKVY-KGRLTDGSLVAVKRLKEERT-QGGELQF-QTEVEMISMAVHR 192
+F+ +LG+G FGKV R L AVK LK++ Q +++ E ++++
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L C +RL V ++ G + +++ G+ + P +IA+G L +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFF 136
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
L II+RD+K N++LD E + DFG+ K + D T GT +IAPE
Sbjct: 137 LQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEI 192
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ + D + +GV+L E++ GQ F+
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEE--RTQGGELQFQTEVEMISMAV 190
+D + ILG GG +V+ R L VAVK L+ + R L+F+ E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 191 HRNLLRL--RGFCMTPTERLLVYPFMVNGSV-ASCLRERGQSQPPLNWSVRKQIALGAAR 247
H ++ + G TP L P++V V LR+ ++ P+ ++ A +
Sbjct: 71 HPAIVAVYATGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 305
L + H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+++PE ++DV+ G +L E++TG+ F
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 143 LGRGGFGKVYK-GRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRL--R 198
+G G +G+ K R +DG ++ K L E Q +EV ++ H N++R R
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCD- 257
T T +V + G +AS + + + + L+ ++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 258 -PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK 316
++HRD+K AN+ LD + +GDFGLA+++++ + V GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMS 192
Query: 317 SSEKTDVFGYGVMLLEL 333
+EK+D++ G +L EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 136 NFSNRNILGRGGFGKVY-KGRLTDGSLVAVKRLKEERT-QGGELQF-QTEVEMISMAVHR 192
+F+ +LG+G FGKV R L AVK LK++ Q +++ E ++++
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L C +RL V ++ G + +++ G+ + P +IA+G L +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFF 457
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
L II+RD+K N++LD E + DFG+ K + D T GT +IAPE
Sbjct: 458 LQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEI 513
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
++ + D + +GV+L E++ GQ F+
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 24/223 (10%)
Query: 129 ELQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMIS 187
E D +R +LG+G +G VY GR L++ +A+K + E ++ + E+ +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIALHK 60
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFM---VNGSVASCLRERGQSQPPLNWSV---RKQI 241
H+N+++ G + +E + FM GS+++ LR + ++ KQI
Sbjct: 61 HLKHKNIVQYLG---SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI 117
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV--VGDFGLAKLMDYKDTHVTTA 299
GL YLHD+ +I+HRD+K N+L++ + V + DFG +K + + T
Sbjct: 118 L----EGLKYLHDN---QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CTET 168
Query: 300 VRGTIGHIAPEYLSTGKS--SEKTDVFGYGVMLLELITGQRAF 340
GT+ ++APE + G + D++ G ++E+ TG+ F
Sbjct: 169 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ +G+G F KV R + G VAVK + + + LQ EV ++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T LV + G V L G+ ++++ A R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAV 126
Query: 254 DHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+C K I+HRD+KA N+LLD + + DFG + + + A G + APE L
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-L 183
Query: 313 STGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ +G+G F KV R + G VAVK + + + LQ EV ++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T LV + G V L G+ ++++ A R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAV 126
Query: 254 DHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+C K I+HRD+KA N+LLD + + DFG + + + T G+ + APE L
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-L 183
Query: 313 STGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ +G+G F KV R + G VAVK + + + LQ EV ++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T LV + G V L G+ ++++ A R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAV 126
Query: 254 DHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+C K I+HRD+KA N+LLD + + DFG + + + T G+ + APE L
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-L 183
Query: 313 STGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 41/235 (17%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISM 188
L+ A+D F +LG+G FG+V K R D A+K+++ T+ +EV +++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLAS 58
Query: 189 AVHRNLLRL-------RGFC--MTPTER----LLVYPFMVNGSVASCLR-ERGQSQPPLN 234
H+ ++R R F MT ++ + + N ++ + E Q
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 235 WSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK------- 287
W + +QI L+Y+H IIHRD+K NI +DE +GDFGLAK
Sbjct: 119 WRLFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 288 --LMDYKDT-----HVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELI 334
+D ++ ++T+A+ GT ++A E L TG +EK D++ G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEE--RTQGGELQFQTEVEMISMAV 190
+D + ILG GG +V+ R L VAVK L+ + R L+F+ E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 191 HRNLLRL--RGFCMTPTERLLVYPFMVNGSV-ASCLRERGQSQPPLNWSVRKQIALGAAR 247
H ++ + G TP L P++V V LR+ ++ P+ ++ A +
Sbjct: 88 HPAIVAVYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIG 305
L + H + IIHRDVK ANI++ V DFG+A+ + V T AV GT
Sbjct: 145 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+++PE ++DV+ G +L E++TG+ F
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 14/220 (6%)
Query: 128 RELQVATDNFSNRNI-LGRGGFGKVYKG--RLTDGSL-VAVKRLKEERTQGGELQFQTEV 183
++L + DN +I LG G FG V +G R+ + VA+K LK+ + + E
Sbjct: 2 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 184 EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL 243
+++ + ++RL G C +LV G + L + + P N + ++
Sbjct: 62 QIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVA---ELLH 117
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT--TAVR 301
+ G+ YL + +HRD+ A N+LL A + DFGL+K + D++ T +A +
Sbjct: 118 QVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
+ APE ++ K S ++DV+ YGV + E ++ GQ+ +
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 27/240 (11%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEM----- 185
+AT + +G G +G VYK R G VA+K ++ + G L T E+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEG-LPISTVREVALLRR 59
Query: 186 ISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP--LNWSVRKQIAL 243
+ H N++RL C T + +V V LR PP L K +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
RGL +LH +C I+HRD+K NIL+ + DFGLA++ Y+ V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--T 174
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ-------------RAFDLARLANDDD 350
+ + APE L + D++ G + E+ + + FDL L +DD
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 143 LGRGGFGKVYKGR--LTDGSLVAVKRLKEERTQGGE----LQFQTEVEMI---SMAVHRN 193
+G G +GKV+K R G VA+KR+ R Q GE L EV ++ H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 194 LLRLRGFCM---TPTERLLVYPF-MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
++RL C T E L F V+ + + L + +P + K + RGL
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGL 133
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
+LH H +++HRD+K NIL+ + + DFGLA++ ++ T+V T+ + AP
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAP 188
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF----DLARLANDDDVMLL----DW 356
E L + D++ G + E+ + F D+ +L DV+ L DW
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGS-LVAVKRLKEERTQ--GGELQFQTEVEMISMAVH 191
D+F LG+G FG VY R +VA+K L + + + G E Q + E+E+ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N+LRL + L+ + G + L++ ++ +++A L Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELA----DALMY 138
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR----GTIGHI 307
H K+IHRD+K N+LL + E + DFG + H + R GT+ ++
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFGWS-------VHAPSLRRKTMCGTLDYL 188
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 343
PE + +EK D++ GV+ EL+ G F+ A
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESA 224
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ--FQTEVEMISMAVHR 192
N+ LG G FGKV T G VA+K + ++ ++Q + E+ + + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
++++L + E ++V + N ++ S+ ++ I+ + Y
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS-----AVEYC 119
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
H H KI+HRD+K N+LLDE + DFGL+ +M D + G+ + APE +
Sbjct: 120 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVI 174
Query: 313 STGK--SSEKTDVFGYGVMLLELITGQRAFD 341
S GK + + DV+ GV+L ++ + FD
Sbjct: 175 S-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 143 LGRGGFGKV-------YKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
LG G FGKV KGR + VAVK LKE + +E ++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQP------------PLNWSVRKQIAL 243
+L G C LL+ + GS+ LRE + P L+ + + +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 244 G--------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 295
G ++G+ YL + K++HRD+ A NIL+ E + + DFGL++ + +D++
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 296 VTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
V + R + +A E L + ++DV+ +GV+L E++T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ--FQTEVEMISMAVHR 192
N+ LG G FGKV T G VA+K + ++ ++Q + E+ + + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
++++L + E ++V + N ++ S+ ++ I+ + Y
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS-----AVEYC 123
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
H H KI+HRD+K N+LLDE + DFGL+ +M D + G+ + APE +
Sbjct: 124 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVI 178
Query: 313 STGK--SSEKTDVFGYGVMLLELITGQRAFD 341
S GK + + DV+ GV+L ++ + FD
Sbjct: 179 S-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ--FQTEVEMISMAVHR 192
N+ LG G FGKV T G VA+K + ++ ++Q + E+ + + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
++++L + E ++V + N ++ S+ ++ I+ + Y
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS-----AVEYC 129
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
H H KI+HRD+K N+LLDE + DFGL+ +M D + G+ + APE +
Sbjct: 130 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVI 184
Query: 313 STGK--SSEKTDVFGYGVMLLELITGQRAFD 341
S GK + + DV+ GV+L ++ + FD
Sbjct: 185 S-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ--FQTEVEMISMAVHR 192
N+ LG G FGKV T G VA+K + ++ ++Q + E+ + + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
++++L + E ++V + N ++ S+ ++ I+ + Y
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIIS-----AVEYC 128
Query: 253 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
H H KI+HRD+K N+LLDE + DFGL+ +M D + G+ + APE +
Sbjct: 129 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVI 183
Query: 313 STGK--SSEKTDVFGYGVMLLELITGQRAFD 341
S GK + + DV+ GV+L ++ + FD
Sbjct: 184 S-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 58/296 (19%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+F ++G GGFG+V+K + DG +KR+K + + EV+ ++ H N+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-----EREVKALAKLDHVNI 66
Query: 195 LRLRG----FCMTP-----------TERLLV-YPFMVNGSVASCL-RERGQS-QPPLNWS 236
+ G F P T+ L + F G++ + + RG+ L
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
+ +QI +G+ Y+H K+I+RD+K +NI L + + +GDFGL + K+
Sbjct: 127 LFEQIT----KGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGK 177
Query: 297 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI-TGQRAFDLARLANDDDVMLLD 355
+GT+ +++PE +S+ ++ D++ G++L EL+ AF+ ++ D L D
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD----LRD 233
Query: 356 WVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
+ SD+ +++ + L+Q L P +RP SE++R L
Sbjct: 234 GII-------------SDI----FDKKEKTLLQKLL---SKKPEDRPNTSEILRTL 269
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ +G+G F KV R + G VAV+ + + + LQ EV ++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T LV + G V L G+ ++++ A R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAV 126
Query: 254 DHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+C K I+HRD+KA N+LLD + + DFG + + + T G+ + APE L
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-L 183
Query: 313 STGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 143 LGRGGFGKVYKGR--LTDGSLVAVKRLKEERTQGGE----LQFQTEVEMI---SMAVHRN 193
+G G +GKV+K R G VA+KR+ R Q GE L EV ++ H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 194 LLRLRGFCM---TPTERLLVYPF-MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
++RL C T E L F V+ + + L + +P + K + RGL
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGL 133
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
+LH H +++HRD+K NIL+ + + DFGLA++ ++ T+V T+ + AP
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAP 188
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF----DLARLANDDDVMLL----DW 356
E L + D++ G + E+ + F D+ +L DV+ L DW
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMA 189
+ +NF +G G +G VYK R LT G +VA+K+++ + T+G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L T + LV+ V+ + + + PL + K +GL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEH-VDQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 119
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIA 308
A+ H H +++HRD+K N+L++ E + DFGLA+ T+ V T+ + A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 174
Query: 309 PEYLSTGK-SSEKTDVFGYGVMLLELITGQRAF 340
PE L K S D++ G + E++T + F
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 31/235 (13%)
Query: 143 LGRGGFGKVYKGR--LTDGSLVAVKRLKEERTQGGE----LQFQTEVEMI---SMAVHRN 193
+G G +GKV+K R G VA+KR+ R Q GE L EV ++ H N
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 194 LLRLRGFCM---TPTERLLVYPF-MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
++RL C T E L F V+ + + L + +P + K + RGL
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGL 133
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
+LH H +++HRD+K NIL+ + + DFGLA++ ++ T+V T+ + AP
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAP 188
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF----DLARLANDDDVMLL----DW 356
E L + D++ G + E+ + F D+ +L DV+ L DW
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 134 TDNFSNRNILGRGGFGKVY----KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMA 189
+D F + LGRG VY KG +L +K+ +++ +TE+ ++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI------VRTEIGVLLRL 105
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L+ TPTE LV + G + + E+G KQI +
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI----LEAV 161
Query: 250 AYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
AYLH++ I+HRD+K N+L + + DFGL+K+++++ T V GT G+
Sbjct: 162 AYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGY 216
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE L + D++ G++ L+ G F
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 22/242 (9%)
Query: 117 VHLGQL-------KRFSLRELQ--------VATDNFSNRNILGRGGFGKVYKGRL-TDGS 160
HLGQ ++ LR LQ + D F + +LGRGGFG+V+ ++ G
Sbjct: 152 AHLGQAPFQEFLDSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGK 211
Query: 161 LVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGS 218
L A K+L ++R + G E ++++ R ++ L T T+ LV M G
Sbjct: 212 LYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGD 271
Query: 219 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 278
+ + + P GL +LH II+RD+K N+LLD++
Sbjct: 272 IRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNV 328
Query: 279 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 338
+ D GLA + T T GT G +APE L + D F GV L E+I +
Sbjct: 329 RISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 339 AF 340
F
Sbjct: 388 PF 389
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMA 189
Q ++ N +G G G+V+K R G ++AVK+++ + + +++++ +
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV-LK 79
Query: 190 VHRN--LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H +++ G +T T+ + M G+ A L++R Q P+ + ++ + +
Sbjct: 80 SHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQG--PIPERILGKMTVAIVK 135
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGH 306
L YL + +IHRDVK +NILLDE + + DFG++ +L+D K + G +
Sbjct: 136 ALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAY 190
Query: 307 IAPEYLSTGKSSE-----KTDVFGYGVMLLELITGQRAF 340
+APE + ++ + DV+ G+ L+EL TGQ +
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 143 LGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
LG GGFG V + D G VA+K+ ++E + ++ E++++ H N++ R
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 202 -----MTPTER-LLVYPFMVNGSVASCLRE----RGQSQPPLNWSVRKQIALGAARGLAY 251
+ P + LL + G + L + G + P+ + + + L Y
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-----RTLLSDISSALRY 136
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVG---DFGLAKLMDYKDTHVTTAVRGTIGHIA 308
LH++ +IIHRD+K NI+L + ++ D G AK +D + + T GT+ ++A
Sbjct: 137 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLA 191
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE L K + D + +G + E ITG R F
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+G G +G VYK + G A+K+++ E+ +G E+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 202 MTPTERLLVYPFM---VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
T +LV+ + + + C E G L K L G+AY HD
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVC--EGG-----LESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 259 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL-STGKS 317
+++HRD+K N+L++ E E + DFGLA+ T V T+ + AP+ L + K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKY 178
Query: 318 SEKTDVFGYGVMLLELITGQRAF 340
S D++ G + E++ G F
Sbjct: 179 STTIDIWSVGCIFAEMVNGAPLF 201
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 143 LGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
LG GGFG V + D G VA+K+ ++E + ++ E++++ H N++ R
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 202 -----MTPTER-LLVYPFMVNGSVASCLRE----RGQSQPPLNWSVRKQIALGAARGLAY 251
+ P + LL + G + L + G + P+ + + + L Y
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-----RTLLSDISSALRY 137
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVG---DFGLAKLMDYKDTHVTTAVRGTIGHIA 308
LH++ +IIHRD+K NI+L + ++ D G AK +D + + T GT+ ++A
Sbjct: 138 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLA 192
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE L K + D + +G + E ITG R F
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+G G +G VYK + G A+K+++ E+ +G E+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 202 MTPTERLLVYPFM---VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
T +LV+ + + + C E G L K L G+AY HD
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVC--EGG-----LESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 259 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL-STGKS 317
+++HRD+K N+L++ E E + DFGLA+ T V T+ + AP+ L + K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKY 178
Query: 318 SEKTDVFGYGVMLLELITGQRAF 340
S D++ G + E++ G F
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLF 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 143 LGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGF 200
LG G +G VYK + G +VA+K++ E +LQ E+ ++ ++++ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 201 CMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
T+ +V + GSV+ +R R ++ L I +GL YLH +
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQSTLKGLEYLHFM---RK 146
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 319
IHRD+KA NILL+ E A + DFG+A +L D V GT +APE + +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTPFWMAPEVIQEIGYNC 204
Query: 320 KTDVFGYGVMLLELITGQRAF 340
D++ G+ +E+ G+ +
Sbjct: 205 VADIWSLGITAIEMAEGKPPY 225
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 136/307 (44%), Gaps = 67/307 (21%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+F ++G GGFG+V+K + DG ++R+K + + EV+ ++ H N+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA-----EREVKALAKLDHVNI 67
Query: 195 LRLRG----FCMTP------------------------TERLLV-YPFMVNGSVASCLRE 225
+ G F P T+ L + F G++ + +
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 226 RGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 285
R + L+ + ++ +G+ Y+H K+IHRD+K +NI L + + +GDFGL
Sbjct: 128 RRGEK--LDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 286 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI-TGQRAFDLAR 344
+ K+ T +GT+ +++PE +S+ ++ D++ G++L EL+ AF+ ++
Sbjct: 183 VTSL--KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK 240
Query: 345 LANDDDVMLLDWVXXXXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM 404
D L D + SD+ +++ + L+Q L P +RP
Sbjct: 241 FFTD----LRDGII-------------SDI----FDKKEKTLLQKLL---SKKPEDRPNT 276
Query: 405 SEVVRML 411
SE++R L
Sbjct: 277 SEILRTL 283
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 131/314 (41%), Gaps = 39/314 (12%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQT-EVEMISMAV 190
+ + + N ++G G +G V K R D G +VA+K+ E + E++++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
H NL+ L C LV+ F V+ ++ L L++ V ++ G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEF-VDHTILDDLELFPNG---LDYQVVQKYLFQIINGIG 138
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-----YKDTHVTTAVRGTIG 305
+ H H IIHRD+K NIL+ + + DFG A+ + Y D T R
Sbjct: 139 FCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR---- 191
Query: 306 HIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF----DLARLANDDDVMLLDWVXXX 360
APE L K + DV+ G ++ E+ G+ F D+ +L + +M L +
Sbjct: 192 --APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYH--IMMCLGNLIPR 247
Query: 361 XXXXXXXXXVDSDMEGNYIEEE----------VEQLIQVALLCTQGSPMERPKMSEVVR- 409
V + + I+E E +I +A C P +RP +E++
Sbjct: 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307
Query: 410 -MLEGDGLAERWEE 422
+ DG AER+ +
Sbjct: 308 DFFQMDGFAERFSQ 321
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDG----SLVAVKRLKEER-TQGGELQFQTEVEM 185
+V +NF +LG G +GKV+ R G L A+K LK+ Q + T E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 186 ISMAVHRN---LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIA 242
+ R L+ L T T+ L+ ++ G + + L +R + QI
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH-----EVQIY 164
Query: 243 LG-AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
+G L +LH II+RD+K NILLD V+ DFGL+K +T
Sbjct: 165 VGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 221
Query: 302 GTIGHIAPEYLSTGKSS--EKTDVFGYGVMLLELITGQRAF 340
GTI ++AP+ + G S + D + GV++ EL+TG F
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ +G+G F KV R + G VAVK + + + LQ EV + + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T LV + G V L G+ + + +QI + Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYCH 130
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
I+HRD+KA N+LLD + + DFG + + + A G + APE L
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LF 184
Query: 314 TGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 32/221 (14%)
Query: 143 LGRGGFGKV-------YKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
LG G FGKV KGR + VAVK LKE + +E ++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQP------------PLNWSVRKQIAL 243
+L G C LL+ + GS+ LRE + P L+ + + +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 244 G--------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 295
G ++G+ YL + K++HRD+ A NIL+ E + + DFGL++ + +D+
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 296 VTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
V + R + +A E L + ++DV+ +GV+L E++T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+G G +G VYK + G A+K+++ E+ +G E+ ++ H N+++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 202 MTPTERLLVYPFM---VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
T +LV+ + + + C E G L K L G+AY HD
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVC--EGG-----LESVTAKSFLLQLLNGIAYCHDR--- 119
Query: 259 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL-STGKS 317
+++HRD+K N+L++ E E + DFGLA+ T + T+ + AP+ L + K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKY 178
Query: 318 SEKTDVFGYGVMLLELITGQRAF 340
S D++ G + E++ G F
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLF 201
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 17/247 (6%)
Query: 101 KPEDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNI-LGRGGFGKVYKG--RLT 157
KP D E P +LK ++L + DN +I LG G FG V +G R+
Sbjct: 304 KPRPMPMDTSVFESPFSDPEELKD---KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMR 360
Query: 158 DGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 216
+ VA+K LK+ + + E +++ + ++RL G C +LV
Sbjct: 361 KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG 419
Query: 217 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF 276
G + L + + P N + ++ + G+ YL + +HR++ A N+LL
Sbjct: 420 GPLHKFLVGKREEIPVSNVA---ELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRH 473
Query: 277 EAVVGDFGLAKLMDYKDTHVT--TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
A + DFGL+K + D++ T +A + + APE ++ K S ++DV+ YGV + E +
Sbjct: 474 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 533
Query: 335 T-GQRAF 340
+ GQ+ +
Sbjct: 534 SYGQKPY 540
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G+G +G+V++G L G VAVK Q + TE+ + H N+L M
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 203 TP----TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH----- 253
T T+ L+ + +GS+ L +R +P L ++A+ AA GLA+LH
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFL-QRQTLEPHLA----LRLAVSAACGLAHLHVEIFG 127
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM----DYKDTHVTTAVRGTIGHIAP 309
P I HRD K+ N+L+ + + D GLA + DY D V GT ++AP
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAP 186
Query: 310 EYL------STGKSSEKTDVFGYGVMLLEL 333
E L +S + TD++ +G++L E+
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGF 200
+GRG F VYKG T+ ++ VA L++ + E Q F+ E E + H N++R
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 201 CMTPTER----LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
+ + +LV +G++ + L+ + + S +QI +GL +LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL----KGLQFLHTR- 148
Query: 257 DPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
P IIHRD+K NI + +V +GD GLA L K AV GT APE
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXYEE- 204
Query: 316 KSSEKTDVFGYGVMLLELITGQRAF 340
K E DV+ +G LE T + +
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPY 229
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ +G+G F KV R + G VA+K + + + LQ EV ++ + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T L+ + G V L G+ + S +QI + Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH 131
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
+I+HRD+KA N+LLD + + DFG + ++ A G + APE L
Sbjct: 132 QK---RIVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAAPE-LF 185
Query: 314 TGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 11/228 (4%)
Query: 117 VHLGQLKRFSLRELQVATDN-FSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQG 174
++ + ++ E Q T N F +LG+GGFG+V ++ G + A K+L+++R +
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 175 --GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP 232
GE E +++ R ++ L T LV M G + + GQ+ P
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 292
+V AA L D +I++RD+K NILLD+ + D GLA +
Sbjct: 285 EARAV-----FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA--VHVP 337
Query: 293 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ GT+G++APE + + + D + G +L E+I GQ F
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ + +G+G F KV R + G VAVK + + + LQ EV ++ + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T LV + G V L G+ ++++ A R +
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAV 127
Query: 254 DHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+C K I+HRD+KA N+LLD + + DFG + ++ + G+ + APE L
Sbjct: 128 QYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN--EFTVGNKLDTFCGSPPYAAPE-L 184
Query: 313 STGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGS-LVAVKRLKEERTQGGEL--QFQTEVEMISMAVHR 192
+F ++GRG + KV RL + A+K +K+E E QTE + A +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLN---WSVRKQIALGAARGL 249
L C RL VNG +R + P + +S +AL
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN----- 124
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
YLH+ II+RD+K N+LLD E + D+G+ K + T+ GT +IAP
Sbjct: 125 -YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAP 179
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 357
E L D + GV++ E++ G+ FD+ +++ D D++
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + +M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 117 VHLGQLKRFSLRELQVATDN-FSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQG 174
++ + ++ E Q T N F +LG+GGFG+V ++ G + A K+L+++R +
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 175 --GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP 232
GE E +++ R ++ L T LV M G + + GQ+ P
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 292
+V A GL LH +I++RD+K NILLD+ + D GLA +
Sbjct: 285 EARAVF--YAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVP 337
Query: 293 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ GT+G++APE + + + D + G +L E+I GQ F
Sbjct: 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGS-LVAVKRLKEERTQGGEL--QFQTEVEMISMAVHR 192
+F ++GRG + KV RL + A+K +K+E E QTE + A +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLN---WSVRKQIALGAARGL 249
L C RL VNG +R + P + +S +AL
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN----- 120
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
YLH+ II+RD+K N+LLD E + D+G+ K + T+ GT +IAP
Sbjct: 121 -YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAP 175
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 357
E L D + GV++ E++ G+ FD+ +++ D D++
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 223
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGS-LVAVKRLKEERTQGGEL--QFQTEVEMISMAVHR 192
+F ++GRG + KV RL + A+K +K+E E QTE + A +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLN---WSVRKQIALGAARGL 249
L C RL VNG +R + P + +S +AL
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN----- 135
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
YLH+ II+RD+K N+LLD E + D+G+ K + T+ GT +IAP
Sbjct: 136 -YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAP 190
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 357
E L D + GV++ E++ G+ FD+ +++ D D++
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 238
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ +G+G F KV R + G VAV+ + + + LQ EV ++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T LV + G V L G+ ++++ A R +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQIVSAV 126
Query: 254 DHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+C K I+HRD+KA N+LLD + + DFG + + + G+ + APE L
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPE-L 183
Query: 313 STGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 17/212 (8%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGE-LQFQTEVEMISMAV 190
F +LG+G FGKV+ + GS L A+K LK+ + + ++ + E +++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAARGL 249
H +++L T + L+ F+ G + + L +E ++ + + + A L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-------AELAL 137
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIA 308
A H H II+RD+K NILLDEE + DFGL+K +D++ + GT+ ++A
Sbjct: 138 ALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMA 194
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE ++ ++ D + +GV++ E++TG F
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 17/212 (8%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGE-LQFQTEVEMISMAV 190
F +LG+G FGKV+ + GS L A+K LK+ + + ++ + E +++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAARGL 249
H +++L T + L+ F+ G + + L +E ++ + + + A L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-------AELAL 137
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIA 308
A H H II+RD+K NILLDEE + DFGL+K +D++ + GT+ ++A
Sbjct: 138 ALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMA 194
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE ++ ++ D + +GV++ E++TG F
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 7/209 (3%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVH 191
D F + +LGRGGFG+V+ ++ G L A K+L ++R + G E ++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
R ++ L T T+ LV M G + + + P GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH II+RD+K N+LLD++ + D GLA + T T GT G +APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L + D F GV L E+I + F
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 108/212 (50%), Gaps = 17/212 (8%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGS----LVAVKRLKEERTQGGE-LQFQTEVEMISMAV 190
F +LG+G FGKV+ + GS L A+K LK+ + + ++ + E +++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAARGL 249
H +++L T + L+ F+ G + + L +E ++ + + + A L
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-------AELAL 138
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIA 308
A H H II+RD+K NILLDEE + DFGL+K +D++ + GT+ ++A
Sbjct: 139 ALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMA 195
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE ++ ++ D + +GV++ E++TG F
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 7/209 (3%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVH 191
D F + +LGRGGFG+V+ ++ G L A K+L ++R + G E ++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
R ++ L T T+ LV M G + + + P GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH II+RD+K N+LLD++ + D GLA + T T GT G +APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L + D F GV L E+I + F
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 123
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 7/209 (3%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVH 191
D F + +LGRGGFG+V+ ++ G L A K+L ++R + G E ++++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
R ++ L T T+ LV M G + + + P GL +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH II+RD+K N+LLD++ + D GLA + T T GT G +APE
Sbjct: 305 LHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPEL 360
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L + D F GV L E+I + F
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L FC E+L + NG + +R+ G + + + L
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 151
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 152 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 125
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G +G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 136 NFSNRNILGRGGFGKVYKGRLTDGS-LVAVKRLKEERTQGGEL--QFQTEVEMISMAVHR 192
+F ++GRG + KV RL + A++ +K+E E QTE + A +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLN---WSVRKQIALGAARGL 249
L C RL VNG +R + P + +S +AL
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN----- 167
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
YLH+ II+RD+K N+LLD E + D+G+ K + T+ GT +IAP
Sbjct: 168 -YLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAP 222
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 357
E L D + GV++ E++ G+ FD+ +++ D D++
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 270
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRN 193
N+ +G+G F KV R + G VA+K + + + LQ EV ++ + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
+++L T L+ + G V L G+ + S +QI + Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH 128
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
+I+HRD+KA N+LLD + + DFG + ++ G+ + APE L
Sbjct: 129 QK---RIVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDTFCGSPPYAAPE-LF 182
Query: 314 TGKSSE--KTDVFGYGVMLLELITGQRAFD 341
GK + + DV+ GV+L L++G FD
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 31/233 (13%)
Query: 132 VATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMIS 187
+ +D + + +LG+G FG+V K ++T G AVK + ++ + + + EV+++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+++L F LV G + + R + + +Q+
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----S 137
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 301
G+ Y+H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 138 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 187
Query: 302 --GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 352
GT +IAPE L G EK DV+ GV+L L++G F+ AN+ D++
Sbjct: 188 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDIL 236
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 32/221 (14%)
Query: 143 LGRGGFGKV-------YKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
LG G FGKV KGR + VAVK LKE + +E ++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGR-AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQP------------PLNWSVRKQIAL 243
+L G C LL+ + GS+ LRE + P L+ + + +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 244 G--------AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 295
G ++G+ YL + ++HRD+ A NIL+ E + + DFGL++ + +D+
Sbjct: 150 GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 296 VTTAV-RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
V + R + +A E L + ++DV+ +GV+L E++T
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 31/233 (13%)
Query: 132 VATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMIS 187
+ +D + + +LG+G FG+V K ++T G AVK + ++ + + + EV+++
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+++L F LV G + + R + + +Q+
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----S 160
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 301
G+ Y+H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 161 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 210
Query: 302 --GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 352
GT +IAPE L G EK DV+ GV+L L++G F+ AN+ D++
Sbjct: 211 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDIL 259
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 31/233 (13%)
Query: 132 VATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMIS 187
+ +D + + +LG+G FG+V K ++T G AVK + ++ + + + EV+++
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+++L F LV G + + R + + +Q+
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----S 143
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 301
G+ Y+H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 144 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 193
Query: 302 --GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 352
GT +IAPE L G EK DV+ GV+L L++G F+ AN+ D++
Sbjct: 194 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDIL 242
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
DNF +G G G V + + G LVAVK++ + Q EL F EV ++ H N
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHEN 87
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
++ + + E +V F+ G++ + + +N + L + L+ LH
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLH 142
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
+IHRD+K+ +ILL + + DFG + K+ + GT +APE +S
Sbjct: 143 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELIS 198
Query: 314 TGKSSEKTDVFGYGVMLLELITGQRAF 340
+ D++ G+M++E++ G+ +
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 31/233 (13%)
Query: 132 VATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMIS 187
+ +D + + +LG+G FG+V K ++T G AVK + ++ + + + EV+++
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+++L F LV G + + R + + +Q+
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----S 161
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 301
G+ Y+H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 162 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKMKD 211
Query: 302 --GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 352
GT +IAPE L G EK DV+ GV+L L++G F+ AN+ D++
Sbjct: 212 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDIL 260
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
DNF +G G G V + + G LVAVK++ + Q EL F EV ++ H N
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHEN 78
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
++ + + E +V F+ G++ + + +N + L + L+ LH
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLH 133
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
+IHRD+K+ +ILL + + DFG + K+ + GT +APE +S
Sbjct: 134 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELIS 189
Query: 314 TGKSSEKTDVFGYGVMLLELITGQRAF 340
+ D++ G+M++E++ G+ +
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
DNF +G G G V + + G LVAVK++ + Q EL F EV ++ H N
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHEN 209
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
++ + + E +V F+ G++ + + +N + L + L+ LH
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLH 264
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
+IHRD+K+ +ILL + + DFG + K+ + GT +APE +S
Sbjct: 265 AQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELIS 320
Query: 314 TGKSSEKTDVFGYGVMLLELITGQRAF 340
+ D++ G+M++E++ G+ +
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
DNF +G G G V + + G LVAVK++ + Q EL F EV ++ H N
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHEN 89
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
++ + + E +V F+ G++ + + +N + L + L+ LH
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLH 144
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
+IHRD+K+ +ILL + + DFG + K+ + GT +APE +S
Sbjct: 145 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELIS 200
Query: 314 TGKSSEKTDVFGYGVMLLELITGQRAF 340
+ D++ G+M++E++ G+ +
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
DNF +G G G V + + G LVAVK++ + Q EL F EV ++ H N
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHEN 82
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
++ + + E +V F+ G++ + + +N + L + L+ LH
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLH 137
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
+IHRD+K+ +ILL + + DFG + K+ + GT +APE +S
Sbjct: 138 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELIS 193
Query: 314 TGKSSEKTDVFGYGVMLLELITGQRAF 340
+ D++ G+M++E++ G+ +
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 143 LGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLL 195
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRER------GQSQPPL--------NWSVRKQI 241
L G C L++ + G + + LR + ++ P + +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 300
+ A+G+A+L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 167 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
R + +APE + + ++DV+ YG+ L EL +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 107/235 (45%), Gaps = 41/235 (17%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISM 188
L+ A+D F +LG+G FG+V K R D A+K+++ T+ +EV +++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVXLLAS 58
Query: 189 AVHRNLLRL-------RGFCMTPTE------RLLVYPFMVNGSVASCLR-ERGQSQPPLN 234
H+ ++R R F T + + N ++ + E Q
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY 118
Query: 235 WSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK------- 287
W + +QI L+Y+H IIHR++K NI +DE +GDFGLAK
Sbjct: 119 WRLFRQIL----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 288 --LMDYKDT-----HVTTAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELI 334
+D ++ ++T+A+ GT ++A E L TG +EK D + G++ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 143 LGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+G G G V R G VAVK + + Q EL F EV ++ H N++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKSY 111
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
+ E ++ F+ G++ + SQ LN + + LAYLH +I
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQ---GVI 163
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+K+ +ILL + + DFG + KD + GT +APE +S + +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 322 DVFGYGVMLLELITGQRAF 340
D++ G+M++E++ G+ +
Sbjct: 223 DIWSLGIMVIEMVDGEPPY 241
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRL-TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
DNF +G G G V + + G LVAVK++ + Q EL F EV ++ H N
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHEN 132
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
++ + + E +V F+ G++ + + +N + L + L+ LH
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLH 187
Query: 254 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
+IHRD+K+ +ILL + + DFG + K+ + GT +APE +S
Sbjct: 188 AQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELIS 243
Query: 314 TGKSSEKTDVFGYGVMLLELITGQRAF 340
+ D++ G+M++E++ G+ +
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 143 LGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLL 195
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRER------GQSQPPL--------NWSVRKQI 241
L G C L++ + G + + LR + ++ P + +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 300
+ A+G+A+L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
R + +APE + + ++DV+ YG+ L EL +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 44/231 (19%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+F LGRGGFG V++ + D A+KR++ + + EV+ ++ H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 195 LRLRGFCM--TPTERLL-----VYPFM-------------VNGSVASCLRERGQSQPPLN 234
+R + TE+L VY ++ +NG RER
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER-------- 117
Query: 235 WSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 294
SV I L A + +LH ++HRD+K +NI + VGDFGL MD +
Sbjct: 118 -SVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
Query: 295 HVT-----------TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
T T GT +++PE + S K D+F G++L EL+
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 142 ILGRGGFGKVYK--GRLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLR 198
+LG+G FG+V K R+T AVK + + + + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQE-YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
+ +V G + + +R + + KQ+ G+ Y+H H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF----SGITYMHKH--- 140
Query: 259 KIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
I+HRD+K NILL +++ + + DFGL+ ++T + + GT +IAPE L G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYIAPEVLR-G 197
Query: 316 KSSEKTDVFGYGVMLLELITGQRAF 340
EK DV+ GV+L L++G F
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 143 LGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLL 195
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRER------GQSQPPL--------NWSVRKQI 241
L G C L++ + G + + LR + ++ P + +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 300
+ A+G+A+L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 169 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
R + +APE + + ++DV+ YG+ L EL +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 143 LGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLL 195
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRER------GQSQPPL--------NWSVRKQI 241
L G C L++ + G + + LR + ++ P + +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 300
+ A+G+A+L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
R + +APE + + ++DV+ YG+ L EL +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 32/240 (13%)
Query: 119 LGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRL------TDGSLVAVKRLKEERT 172
+ Q K+ L+E+ ++ F LG FGKVYKG L VA+K LK++
Sbjct: 12 INQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE 69
Query: 173 QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQS--- 229
+F+ E + + H N++ L G +++ + +G + L R
Sbjct: 70 GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDV 129
Query: 230 -------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF 276
+PP + QIA G+ YL H ++H+D+ N+L+ ++
Sbjct: 130 GSTDDDRTVKSALEPPDFVHLVAQIA----AGMEYLSSH---HVVHKDLATRNVLVYDKL 182
Query: 277 EAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ D GL + + D + + I +APE + GK S +D++ YGV+L E+ +
Sbjct: 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 143 LGRGGFGKVYKGRL-----TDGSL-VAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLL 195
LG G FGKV + +D ++ VAVK LK +E++++S + H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRER------GQSQPPL--------NWSVRKQI 241
L G C L++ + G + + LR + ++ P + +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 300
+ A+G+A+L IHRD+ A NILL + DFGLA+ + +V
Sbjct: 151 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
R + +APE + + ++DV+ YG+ L EL +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + + GT +++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ +S+ +D++ G ++ +L+ G F
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 35/220 (15%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N ++G G FG V++ +L + VA+K+ L+++R + ELQ ++ + H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ------IMRIVKHPNVV 95
Query: 196 RLRGFCMTPTER--------LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
L+ F + ++ +L Y V +V R + + + + K R
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEY---VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
LAY+H I HRD+K N+LLD G+ KL+D+ + A + I
Sbjct: 153 SLAYIHSI---GICHRDIKPQNLLLDPP-------SGVLKLIDFGSAKILIAGEPNVSXI 202
Query: 308 APEY-----LSTGKSSEKT--DVFGYGVMLLELITGQRAF 340
Y L G ++ T D++ G ++ EL+ GQ F
Sbjct: 203 CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 143 LGRGGFGKVYKGRLTDG-SLVAVKRLKEERTQGGEL------------QFQTEVEMISMA 189
LG G +G+V + +G S A+K +K+ + G + E+ ++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L LV F G + + R + ++ KQI G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQIL----SGI 159
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
YLH H I+HRD+K NILL+ + + DFGL+ KD + + GT +
Sbjct: 160 CYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS-KDYKLRDRL-GTAYY 214
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
IAPE L K +EK DV+ GV++ L+ G F
Sbjct: 215 IAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 143 LGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
LG G G+V R+T+ + VAVK + +R + E+ + M H N+++ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 201 CMTPTERLLVYPFMVNGSVASCLR-ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK 259
+ L + G + + + G +P + +A G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVVYLHGI---G 124
Query: 260 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGK-S 317
I HRD+K N+LLDE + DFGLA + Y + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 318 SEKTDVFGYGVMLLELITGQRAFD 341
+E DV+ G++L ++ G+ +D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 159 GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGS 218
G VAVK++ + Q EL F EV ++ H N++ + + E +V F+ G+
Sbjct: 70 GKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGA 128
Query: 219 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 278
+ + + +N + L R L+YLH+ +IHRD+K+ +ILL +
Sbjct: 129 LTDIV-----THTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRI 180
Query: 279 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 338
+ DFG + K+ + GT +APE +S + D++ G+M++E+I G+
Sbjct: 181 KLSDFGFCAQVS-KEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 339 AF 340
+
Sbjct: 240 PY 241
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 142 ILGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLR 198
+LG+G FG+V K R+T AVK + + + + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
+ +V G + + +R + + KQ+ G+ Y+H H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF----SGITYMHKH--- 140
Query: 259 KIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
I+HRD+K NILL +++ + + DFGL+ ++T + + GT +IAPE L G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYIAPEVLR-G 197
Query: 316 KSSEKTDVFGYGVMLLELITGQRAF 340
EK DV+ GV+L L++G F
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 142 ILGRGGFGKVYKG--RLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLR 198
+LG+G FG+V K R+T AVK + + + + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
+ +V G + + +R + + KQ+ G+ Y+H H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF----SGITYMHKH--- 140
Query: 259 KIIHRDVKAANILL---DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG 315
I+HRD+K NILL +++ + + DFGL+ ++T + + GT +IAPE L G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDRI-GTAYYIAPEVLR-G 197
Query: 316 KSSEKTDVFGYGVMLLELITGQRAF 340
EK DV+ GV+L L++G F
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGS----LVAVKRLKEE---RTQGGELQFQTEV 183
++ + F +LG+GG+GKV++ R G+ + A+K LK+ R + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 184 EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL 243
++ H ++ L T + L+ ++ G + L G +I++
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
L +LH II+RD+K NI+L+ + + DFGL K D VT GT
Sbjct: 133 A----LGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGT 184
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
I ++APE L + D + G ++ +++TG F
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVE 184
+R LQ+ +++ ++GRG FG+V R V +L K E + + F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 185 MISMAVHRNLLRLRGFCMTPTERLL--VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIA 242
I MA + ++ FC ++ L V +M G + + + P W+ K
Sbjct: 127 DI-MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWA--KFYT 180
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVR 301
L +H +IHRDVK N+LLD+ + DFG MD H TAV
Sbjct: 181 AEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV- 236
Query: 302 GTIGHIAPEYLST----GKSSEKTDVFGYGVMLLELITGQRAF 340
GT +I+PE L + G + D + GV L E++ G F
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 144
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + A GT +++P
Sbjct: 145 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 132 VATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQ-FQTEVEMISM 188
V D+F +G+G FGKV + D + A+K + K++ + E++ E++++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H L+ L + +V ++ G LR Q K
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGD----LRYHLQQNVHFKEETVKLFICELVMA 127
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
L YL + +IIHRD+K NILLDE + DF +A ++ ++T +TT GT ++A
Sbjct: 128 LDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITTMA-GTKPYMA 182
Query: 309 PEYLSTGKS---SEKTDVFGYGVMLLELITGQRAFDL 342
PE S+ K S D + GV EL+ G+R + +
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGS----LVAVKRLKEE---RTQGGELQFQTEV 183
++ + F +LG+GG+GKV++ R G+ + A+K LK+ R + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 184 EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL 243
++ H ++ L T + L+ ++ G + L G +I++
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
L +LH II+RD+K NI+L+ + + DFGL K D VT GT
Sbjct: 133 A----LGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGT 184
Query: 304 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
I ++APE L + D + G ++ +++TG F
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISM 188
+++ D+F + LG G G V+K LV ++L E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
++ G + E + M GS+ L++ G+ + + ++++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKG 116
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHI 307
L YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 23/212 (10%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 194 LLRLRGFCMTPTERLLVYPFMVN-GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYL 252
++RL + P +L+ M + + ERG Q L S Q+ L A R
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQV-LEAVR----- 128
Query: 253 HDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + PE
Sbjct: 129 --HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 183
Query: 311 YLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
++ + ++ V+ G++L +++ G F+
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 31/233 (13%)
Query: 132 VATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMIS 187
+ +D + + +LG+G FG+V K ++T G AVK + ++ + + + EV+++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
H N+ +L F LV G + + R + + +Q+
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL----S 137
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR--- 301
G+ Y H + KI+HRD+K N+LL+ + + + DFGL+ TH + +
Sbjct: 138 GITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASKKXKD 187
Query: 302 --GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 352
GT +IAPE L G EK DV+ GV+L L++G F+ AN+ D++
Sbjct: 188 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDIL 236
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISM 188
+++ D+F + LG G G V+K LV ++L E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
++ G + E + M GS+ L++ G+ + + ++++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKG 116
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHI 307
L YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISM 188
+++ D+F + LG G G V+K LV ++L E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
++ G + E + M GS+ L++ G+ + + ++++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKG 116
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHI 307
L YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 117/278 (42%), Gaps = 28/278 (10%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKR-----LKEERTQGGELQFQTEVEMISMA 189
NF +GRG F +VY+ L DG VA+K+ L + + + ++ E++++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK---EIDLLKQL 89
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++ + E +V G ++ ++ + + + + + L
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
++H +++HRD+K AN+ + +GD GL + K T + V GT +++P
Sbjct: 150 EHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSP 205
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXX 369
E + + K+D++ G +L E+ Q F D + L
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPF------YGDKMNLYSLCKKIEQCDY---- 255
Query: 370 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEV 407
+ ++ EE+ QL+ +C P +RP ++ V
Sbjct: 256 --PPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISM 188
+++ D+F + LG G G V+K LV ++L E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
++ G + E + M GS+ L++ G+ + + ++++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKG 116
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHI 307
L YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISM 188
+++ D+F + LG G G V+K LV ++L E Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
++ G + E + M GS+ L++ G+ + + ++++ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKG 116
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHI 307
L YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 170
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 25/228 (10%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVE 184
++E + + +LG GGFG VY G R++D VA+K ++++R + GEL T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 185 MISMAVHR------NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWS 236
M + + + ++RL + P +L+ P V + + ERG Q L S
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARS 119
Query: 237 VRKQIALGAARGLAYLHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDT 294
Q+ L A R HC + ++HRD+K NIL+D E + DFG L+ KDT
Sbjct: 120 FFWQV-LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT 169
Query: 295 HVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
V T GT + PE++ + ++ V+ G++L +++ G F+
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 127
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 128 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 181
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 128
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 129 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 182
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVH 191
+DN+ + LG+G F V + T G A K + ++ + Q + E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N++RL + LV+ + G + + R +QI +AY
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAY 120
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
H + I+HR++K N+LL + + + DFGLA ++ D+ GT G+++
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE L S+ D++ GV+L L+ G F
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 124
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 125 ---HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 178
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 14/228 (6%)
Query: 118 HLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGE 176
+G+ F + +DN+ + LG+G F V + T G A K + ++ +
Sbjct: 12 QMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD 71
Query: 177 LQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNW 235
Q + E + H N++RL + LV+ + G + + R
Sbjct: 72 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS 131
Query: 236 SVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYK 292
+QI +AY H + I+HR++K N+LL + + + DFGLA ++
Sbjct: 132 HCIQQIL----ESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVN 182
Query: 293 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
D+ GT G+++PE L S+ D++ GV+L L+ G F
Sbjct: 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 25/228 (10%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVE 184
++E + + +LG GGFG VY G R++D VA+K ++++R + GEL T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 185 MISMAVHR------NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWS 236
M + + + ++RL + P +L+ P V + + ERG Q L S
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARS 119
Query: 237 VRKQIALGAARGLAYLHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDT 294
Q+ L A R HC + ++HRD+K NIL+D E + DFG L+ KDT
Sbjct: 120 FFWQV-LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT 169
Query: 295 HVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
V T GT + PE++ + ++ V+ G++L +++ G F+
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVH 191
+DN+ + LG+G F V + T G A K + ++ + Q + E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N++RL + LV+ + G + + R +QI +AY
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAY 120
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
H + I+HR++K N+LL + + + DFGLA ++ D+ GT G+++
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE L S+ D++ GV+L L+ G F
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISMA 189
++ D+F + LG G G V+K LV ++L E Q E++++
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
++ G + E + M GS+ L++ G+ + + ++++ +GL
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGL 179
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIA 308
YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +++
Sbjct: 180 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMS 233
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
PE L S ++D++ G+ L+E+ G+
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 143
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 144 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 197
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVH 191
+DN+ + LG+G F V + T G A K + ++ + Q + E + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N++RL + LV+ + G + + R +QI +AY
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----ESIAY 119
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
H + I+HR++K N+LL + + + DFGLA ++ D+ GT G+++
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 174
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE L S+ D++ GV+L L+ G F
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 25/228 (10%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVE 184
++E + + +LG GGFG VY G R++D VA+K ++++R + GEL T V
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 185 MISMAVHR------NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWS 236
M + + + ++RL + P +L+ P V + + ERG Q L S
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARS 119
Query: 237 VRKQIALGAARGLAYLHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDT 294
Q+ L A R HC + ++HRD+K NIL+D E + DFG L+ KDT
Sbjct: 120 FFWQV-LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT 169
Query: 295 HVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
V T GT + PE++ + ++ V+ G++L +++ G F+
Sbjct: 170 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 144
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 145 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 198
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 144
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 145 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 198
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 147
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + + GT +++P
Sbjct: 148 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 143
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 144 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 197
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 124
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 125 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 178
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 63
Query: 201 CM-------TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
T T+ LV + +GS+ L + + ++AL A GLA+LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 118
Query: 254 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 305
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 306 HIAPEYLSTG------KSSEKTDVFGYGVMLLEL 333
++APE L +S ++ D++ G++ E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 25/228 (10%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVE 184
++E + + +LG GGFG VY G R++D VA+K ++++R + GEL T V
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 185 MISMAVHR------NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWS 236
M + + + ++RL + P +L+ P V + + ERG Q L S
Sbjct: 83 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARS 141
Query: 237 VRKQIALGAARGLAYLHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDT 294
Q+ L A R HC + ++HRD+K NIL+D E + DFG L+ KDT
Sbjct: 142 FFWQV-LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT 191
Query: 295 HVTTAVRGTIGHIAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
V T GT + PE++ + ++ V+ G++L +++ G F+
Sbjct: 192 -VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 157
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 158 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 211
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 157
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 158 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 211
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 156
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 157 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 210
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 156
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 157 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 210
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 62
Query: 201 CM-------TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
T T+ LV + +GS+ L + + ++AL A GLA+LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 117
Query: 254 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 305
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 306 HIAPEYLSTG------KSSEKTDVFGYGVMLLEL 333
++APE L +S ++ D++ G++ E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 124
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 125 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 178
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 156
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 157 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 210
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 69 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 123
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 124 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 70 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 124
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 125 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 156
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 157 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 210
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 157
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 158 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 211
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 157
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 158 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 211
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 89/210 (42%), Gaps = 14/210 (6%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHR 192
+F ++G+G FGKV R + AVK L+++ + E +E ++ V
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGS--VASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
L F ++L +NG RER +P + A A L
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-----YAAEIASALG 153
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
YLH I++RD+K NILLD + V+ DFGL K + + T+ GT ++APE
Sbjct: 154 YLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPE 209
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L D + G +L E++ G F
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 171
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 172 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 225
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 68
Query: 201 CM-------TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
T T+ LV + +GS+ L + + ++AL A GLA+LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 123
Query: 254 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 305
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 306 HIAPEYLSTG------KSSEKTDVFGYGVMLLEL 333
++APE L +S ++ D++ G++ E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 144
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 145 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 198
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 171
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 172 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 225
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 101
Query: 201 CM-------TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
T T+ LV + +GS+ L + + ++AL A GLA+LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 156
Query: 254 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 305
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 306 HIAPEYLSTG------KSSEKTDVFGYGVMLLEL 333
++APE L +S ++ D++ G++ E+
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 143
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + + GT +++P
Sbjct: 144 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 37/239 (15%)
Query: 120 GQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQ 173
G+LK SL ++ + LG FGKVYKG L VA+K LK++
Sbjct: 1 GKLKEISLSAVRFMEE-------LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG 53
Query: 174 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQS---- 229
+F+ E + + H N++ L G +++ + +G + L R
Sbjct: 54 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 113
Query: 230 ------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 277
+PP + QIA G+ YL H ++H+D+ N+L+ ++
Sbjct: 114 STDDDRTVKSALEPPDFVHLVAQIA----AGMEYLSSH---HVVHKDLATRNVLVYDKLN 166
Query: 278 AVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 335
+ D GL + + D + + I +APE + GK S +D++ YGV+L E+ +
Sbjct: 167 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 65
Query: 201 CM-------TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
T T+ LV + +GS+ L + + ++AL A GLA+LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 120
Query: 254 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 305
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 306 HIAPEYLSTG------KSSEKTDVFGYGVMLLEL 333
++APE L +S ++ D++ G++ E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 36/214 (16%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V++G+ G VAVK +EER+ E E+ M H N+L GF
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE----AEIYQTVMLRHENIL---GF 88
Query: 201 CM-------TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
T T+ LV + +GS+ L + + ++AL A GLA+LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLH 143
Query: 254 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR---GTIG 305
P I HRD+K+ NIL+ + + D GLA D + A GT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 306 HIAPEYLSTG------KSSEKTDVFGYGVMLLEL 333
++APE L +S ++ D++ G++ E+
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 116
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
I +APE ++ + + +DV+ +GV + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISMA 189
++ D+F + LG G G V K + L+ ++L E Q E++++
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
++ G + E + M GS+ L+E + + + ++++ RGL
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIAVLRGL 127
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIA 308
AYL + +I+HRDVK +NIL++ E + DFG++ +L+D + + GT ++A
Sbjct: 128 AYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMA 181
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
PE L S ++D++ G+ L+EL G+
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 163
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 164 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 217
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 68 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 122
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 123 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 67 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 121
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 122 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISMA 189
++ D+F + LG G G V+K LV ++L E Q E++++
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
++ G + E + M GS+ L++ G+ + + ++++ +GL
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGL 144
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIA 308
YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +++
Sbjct: 145 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMS 198
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
PE L S ++D++ G+ L+E+ G+
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 20/238 (8%)
Query: 108 DVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVK 165
D E+ EV L + K +V + F +LG+G FGKV K + T G A+K
Sbjct: 130 DNSGAEEMEVSLAKPKH------RVTMNEFEYLKLLGKGTFGKVILVKEKAT-GRYYAMK 182
Query: 166 RLKEERTQGGE--LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL 223
LK+E + TE ++ + H L L+ T V + G + L
Sbjct: 183 ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL 242
Query: 224 -RERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 282
RER S+ + + ++ L YLH + +++RD+K N++LD++ + D
Sbjct: 243 SRERVFSEDRARFYGAEIVS-----ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITD 295
Query: 283 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
FGL K KD GT ++APE L D +G GV++ E++ G+ F
Sbjct: 296 FGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 20/238 (8%)
Query: 108 DVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVK 165
D E+ EV L + K +V + F +LG+G FGKV K + T G A+K
Sbjct: 127 DNSGAEEMEVSLAKPKH------RVTMNEFEYLKLLGKGTFGKVILVKEKAT-GRYYAMK 179
Query: 166 RLKEERTQGGE--LQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL 223
LK+E + TE ++ + H L L+ T V + G + L
Sbjct: 180 ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL 239
Query: 224 -RERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 282
RER S+ + + ++ L YLH + +++RD+K N++LD++ + D
Sbjct: 240 SRERVFSEDRARFYGAEIVS-----ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITD 292
Query: 283 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
FGL K KD GT ++APE L D +G GV++ E++ G+ F
Sbjct: 293 FGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------N 193
+LG GGFG VY G R++D VA+K ++++R + GEL T V M + + +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 194 LLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
++RL + P +L+ P V + + ERG Q L S Q+ L A R
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR---- 176
Query: 252 LHDHC-DPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
HC + ++HRD+K NIL+D E + DFG L+ KDT V T GT + P
Sbjct: 177 ---HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPP 230
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E++ + ++ V+ G++L +++ G F+
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 93 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 147
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 148 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 144
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 145 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 95 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 149
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 150 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+G+G G VY + G VA++++ ++ EL E+ ++ + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
+ E +V ++ GS+ + E + + R+ + + L +LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 138
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+K+ NILL + + DFG + + + +T V GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 322 DVFGYGVMLLELITGQRAF 340
D++ G+M +E+I G+ +
Sbjct: 198 DIWSLGIMAIEMIEGEPPY 216
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 116
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
I +APE ++ + + +DV+ +GV + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 144
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 145 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 146
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 74 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 128
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 129 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 142
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 150
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 151 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 142
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 142
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 89 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 143
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 144 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 64 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 119
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 120 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 176
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
I +APE ++ + + +DV+ +GV + E++
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 89 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 144
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 145 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 201
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
I +APE ++ + + +DV+ +GV + E++
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 63 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 118
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 175
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
I +APE ++ + + +DV+ +GV + E++
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 142
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G +I L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALE 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 162
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHVTTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D+ T T T + APE +
Sbjct: 163 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 144
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 66 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 121
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 122 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
I +APE ++ + + +DV+ +GV + E++
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 144
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 142
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 143 --ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISMA 189
++ D+F + LG G G V+K LV ++L E Q E++++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
++ G + E + M GS+ L++ G+ + + ++++ +GL
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGL 120
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIA 308
YL + KI+HRDVK +NIL++ E + DFG++ +L+D + GT +++
Sbjct: 121 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMS 174
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
PE L S ++D++ G+ L+E+ G+
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 147
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 140
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 148
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 149 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 139
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 140 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 146
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F V R L A+K L K + ++ + T E +++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 92 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 147 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 140
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 146
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 162
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 163 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 144
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 145 --ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 14/215 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRLKEERTQGGE--LQFQTEVEMI 186
+V + F +LG+G FGKV K + T G A+K LK+E + TE ++
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKAT-GRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGA 245
+ H L L+ T V + G + L RER S+ + + ++
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS--- 121
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 305
L YLH + +++RD+K N++LD++ + DFGL K KD GT
Sbjct: 122 --ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPE 176
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
++APE L D +G GV++ E++ G+ F
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLILY 116
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
I +APE ++ + + +DV+ +GV + E++
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + + Q N + RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI-CYFLYQILRGLKYIHS- 146
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 14/215 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKV--YKGRLTDGSLVAVKRLKEERTQGGE--LQFQTEVEMI 186
+V + F +LG+G FGKV K + T G A+K LK+E + TE ++
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKAT-GRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGA 245
+ H L L+ T V + G + L RER S+ + + ++
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS--- 119
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 305
L YLH + +++RD+K N++LD++ + DFGL K KD GT
Sbjct: 120 --ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPE 174
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
++APE L D +G GV++ E++ G+ F
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLILY 116
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ D+ A +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTXXKASK 171
Query: 302 GT--IGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
G I +APE ++ + + +DV+ +GV + E++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 441 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLILY 496
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
I +APE ++ + + +DV+ +GV + E++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 14/215 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRLKEERTQGGE--LQFQTEVEMI 186
+V + F +LG+G FGKV K + T G A+K LK+E + TE ++
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKAT-GRYYAMKILKKEVIVAKDEVAHTLTENRVL 63
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGA 245
+ H L L+ T V + G + L RER S+ + + ++
Sbjct: 64 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVS--- 120
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 305
L YLH + +++RD+K N++LD++ + DFGL K KD GT
Sbjct: 121 --ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPE 175
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
++APE L D +G GV++ E++ G+ F
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F +G G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V +M G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F +G G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V +M G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKE-ERTQGGELQFQTEVEMISMA 189
++ D+F + LG G G V+K LV ++L E Q E++++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
++ G + E + M GS+ L++ G+ + + ++++ +GL
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGL 136
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHVTTAVRGTIGHIA 308
YL + KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +++
Sbjct: 137 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMS 190
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQ 337
PE L S ++D++ G+ L+E+ G+
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 143
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+DE+ V DFG AK + + T + GT ++APE
Sbjct: 144 LHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 196
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 126 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQT 181
S R+ ++ + +G G FG V++G VA+K K + +F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 182 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQI 241
E + H ++++L G +T ++ G + S L+ R S L+ +
Sbjct: 441 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLILY 496
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 301
A + LAYL + +HRD+ A N+L+ +GDFGL++ M+ + + +
Sbjct: 497 AYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
I +APE ++ + + +DV+ +GV + E++
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA++++ Q + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 146
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQT-EVEMISMAVH 191
++F ILG G F R L A+K L K + ++ + T E +++S H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 192 RNLLRLRGFCMTPTERLLV-YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
++L F E+L + NG + +R+ G + + + L
Sbjct: 90 PFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 144
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAP 309
YLH IIHRD+K NILL+E+ + DFG AK++ + GT +++P
Sbjct: 145 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + + +D++ G ++ +L+ G F
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 23/177 (12%)
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-V 300
+ ARG+ +L K IHRD+ A NILL E + DFGLA+ + +V
Sbjct: 205 SFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 301 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVXX 359
R + +APE + S K+DV+ YGV+L E+ + G + ++ D
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED----------- 310
Query: 360 XXXXXXXXXXVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 416
+ M E ++ Q+ L C P ERP+ +E+V L GD L
Sbjct: 311 ------FCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL-GDLL 360
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLL 195
LGRG FGKV + + VAVK LKE T TE+++++ + H N++
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 196 RLRGFCMTPTERLLV 210
L G C L+V
Sbjct: 95 NLLGACTKQGGPLMV 109
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + E++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFGLAK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + E++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFGLAK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+G+G G VY + G VA++++ ++ EL E+ ++ + N++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
+ E +V ++ GS+ + E + + R+ + + L +LH + ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 139
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HR++K+ NILL + + DFG + + + +T V GT +APE ++ K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 322 DVFGYGVMLLELITGQRAF 340
D++ G+M +E+I G+ +
Sbjct: 199 DIWSLGIMAIEMIEGEPPY 217
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 143 LGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 198
+G G FG V++G VA+K K + +F E + H ++++L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 199 GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP 258
G +T ++ G + S L+ R S L+ + A + LAYL
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESK--- 127
Query: 259 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSS 318
+ +HRD+ A N+L+ +GDFGL++ M+ + + + I +APE ++ + +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 319 EKTDVFGYGVMLLELI 334
+DV+ +GV + E++
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V+K R G VA+K+ L E +G + E++++ + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 201 CMT---PTERL-----LVYPFM---VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
C T P R LV+ F + G +++ L + S K++ GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEIKRVMQMLLNGL 138
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRG---TIGH 306
Y+H + KI+HRD+KAAN+L+ + + DFGLA+ T+ +
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 307 IAPEYLSTGKS-SEKTDVFGYGVMLLELIT 335
PE L + D++G G ++ E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+G+G G VY + G VA++++ ++ EL E+ ++ + N++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 87
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
+ E +V ++ GS+ + E + + R+ + + L +LH + ++I
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 139
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+K+ NILL + + DFG + + + + V GT +APE ++ K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 322 DVFGYGVMLLELITGQRAF 340
D++ G+M +E+I G+ +
Sbjct: 199 DIWSLGIMAIEMIEGEPPY 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+G+G G VY + G VA++++ ++ EL E+ ++ + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
+ E +V ++ GS+ + E + + R+ + + L +LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 138
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+K+ NILL + + DFG + + + + V GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 322 DVFGYGVMLLELITGQRAF 340
D++ G+M +E+I G+ +
Sbjct: 198 DIWSLGIMAIEMIEGEPPY 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 201
+G+G G VY + G VA++++ ++ EL E+ ++ + N++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII-NEILVMRENKNPNIVNYLDSY 86
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 261
+ E +V ++ GS+ + E + + R+ + + L +LH + ++I
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 138
Query: 262 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT 321
HRD+K+ NILL + + DFG + + + + V GT +APE ++ K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 322 DVFGYGVMLLELITGQRAF 340
D++ G+M +E+I G+ +
Sbjct: 198 DIWSLGIMAIEMIEGEPPY 216
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 142
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 143 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEI 195
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 27/231 (11%)
Query: 132 VATDNFSNRNILGRGGFGK-VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV 190
V +F +++LG G G VY+G + D VAVKR+ E + + Q E
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADREVQLLRESDE--- 76
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL-GAARGL 249
H N++R FC TE+ + ++ A+ L+E + + + + L GL
Sbjct: 77 HPNVIRY--FC---TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGL 131
Query: 250 AYLHDHCDPKIIHRDVKAANILLDE-----EFEAVVGDFGLAKLMDYKDTHVT--TAVRG 302
A+LH I+HRD+K NIL+ + +A++ DFGL K + + + V G
Sbjct: 132 AHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPG 188
Query: 303 TIGHIAPEYLSTGKSSEKT---DVFGYGVMLLELIT-GQRAF--DLARLAN 347
T G IAPE LS T D+F G + +I+ G F L R AN
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V+K R G VA+K+ L E +G + E++++ + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 201 CMT---PTERL-----LVYPFM---VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
C T P R LV+ F + G +++ L + S K++ GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEIKRVMQMLLNGL 138
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRG---TIGH 306
Y+H + KI+HRD+KAAN+L+ + + DFGLA+ T+ +
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 307 IAPEYLSTGKS-SEKTDVFGYGVMLLELIT 335
PE L + D++G G ++ E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V+K R G VA+K+ L E +G + E++++ + H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 201 CMT---PTERL-----LVYPFM---VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
C T P R LV+ F + G +++ L + S K++ GL
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-------FTLSEIKRVMQMLLNGL 138
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRG---TIGH 306
Y+H + KI+HRD+KAAN+L+ + + DFGLA+ T+ +
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 307 IAPEYLSTGKS-SEKTDVFGYGVMLLELIT 335
PE L + D++G G ++ E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G FG+V+K R G VA+K+ L E +G + E++++ + H N++ L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 201 CMT---PTERL-----LVYPFM---VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
C T P R LV+ F + G +++ L + S K++ GL
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEIKRVMQMLLNGL 137
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRG---TIGH 306
Y+H + KI+HRD+KAAN+L+ + + DFGLA+ T+ +
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 307 IAPEYLSTGKS-SEKTDVFGYGVMLLELIT 335
PE L + D++G G ++ E+ T
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 177
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + T + GT ++APE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEI 230
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGE--LQFQTEVEMIS 187
+V ++F +LG+G FGKV R G A+K L++E + TE ++
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAA 246
H L L+ T V + G + L RER ++ + + ++
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS---- 121
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
L YLH +++RD+K N++LD++ + DFGL K D GT +
Sbjct: 122 -ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEY 176
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE L D +G GV++ E++ G+ F
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 143 LGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQT-EVEMISMAVHRNLLRLRGF 200
+G G +G V+K R D G +VA+K+ E + E+ M+ H NL+ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 201 CMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
LV+ + + + L E + Q + + K I + + + H H
Sbjct: 71 FRRKRRLHLVFEYCDH----TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NC 123
Query: 261 IHRDVKAANILLDEEFEAVVGDFGLAKLM----DYKDTHVTTAVRGTIGHIAPEYL-STG 315
IHRDVK NIL+ + + DFG A+L+ DY D V T + +PE L
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WYRSPELLVGDT 178
Query: 316 KSSEKTDVFGYGVMLLELITG 336
+ DV+ G + EL++G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL-----KEERTQGGELQFQTEVEMISMAVHRNLLRL 197
LG G +G+V L + V+R K + + EV ++ + H N+++L
Sbjct: 45 LGSGAYGEVL---LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCD 257
F LV G + + R + + KQ+ G+ YLH H
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVL----SGVTYLHKH-- 155
Query: 258 PKIIHRDVKAANILLD-EEFEAVVG--DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST 314
I+HRD+K N+LL+ +E +A++ DFGL+ + +++ GT +IAPE L
Sbjct: 156 -NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV--FENQKKMKERLGTAYYIAPEVLRK 212
Query: 315 GKSSEKTDVFGYGVMLLELITGQRAF 340
K EK DV+ GV+L L+ G F
Sbjct: 213 -KYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 137 FSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLK----EERTQGGELQFQTEVEMISMAVH 191
+ + LG G F VYK R + +VA+K++K E G E++++ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N++ L + LV+ FM + +++ P S K L +GL Y
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTP---SHIKAYMLMTLQGLEY 127
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH H I+HRD+K N+LLDE + DFGLAK + V T + APE
Sbjct: 128 LHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPEL 183
Query: 312 LSTGK-SSEKTDVFGYGVMLLELI 334
L + D++ G +L EL+
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELL 207
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 146
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T + APE +
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++N + +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ PT + ++V + + L + ++Q N + RGL Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI-CYFLYQILRGLKYIHS- 147
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+LL+ + + DFGLA++ D H T + APE +
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 151
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 152 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 204
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGE--LQFQTEVEMIS 187
+V ++F +LG+G FGKV R G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAA 246
H L L+ T V + G + L RER ++ + + ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS---- 116
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
L YLH +++RD+K N++LD++ + DFGL K D GT +
Sbjct: 117 -ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEY 171
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE L D +G GV++ E++ G+ F
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F +G G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 177
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 230
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 52/222 (23%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G +G+V++G G VAVK ++E++ E TE+ M H N+L
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE----TELYNTVMLRHENILGFIAS 70
Query: 201 CMTP----TERLLVYPFMVNGSV-----------ASCLRERGQSQPPLNWSVRKQIALGA 245
MT T+ L+ + GS+ SCLR I L
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR----------------IVLSI 114
Query: 246 ARGLAYLH-----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 300
A GLA+LH P I HRD+K+ NIL+ + + + D GLA + +
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 301 R---GTIGHIAPEYL------STGKSSEKTDVFGYGVMLLEL 333
GT ++APE L S ++ D++ +G++L E+
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGE--LQFQTEVEMIS 187
+V ++F +LG+G FGKV R G A+K L++E + TE ++
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAA 246
H L L+ T V + G + L RER ++ + + ++
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS---- 119
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
L YLH +++RD+K N++LD++ + DFGL K D GT +
Sbjct: 120 -ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEY 174
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE L D +G GV++ E++ G+ F
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGE--LQFQTEVEMIS 187
+V ++F +LG+G FGKV R G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAA 246
H L L+ T V + G + L RER ++ + + ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS---- 116
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
L YLH +++RD+K N++LD++ + DFGL K D GT +
Sbjct: 117 -ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEY 171
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE L D +G GV++ E++ G+ F
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 149
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 150 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 202
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 52/222 (23%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G +G+V++G G VAVK ++E++ E TE+ M H N+L
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE----TELYNTVMLRHENILGFIAS 70
Query: 201 CMTP----TERLLVYPFMVNGSV-----------ASCLRERGQSQPPLNWSVRKQIALGA 245
MT T+ L+ + GS+ SCLR I L
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR----------------IVLSI 114
Query: 246 ARGLAYLH-----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 300
A GLA+LH P I HRD+K+ NIL+ + + + D GLA + +
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174
Query: 301 R---GTIGHIAPEYL------STGKSSEKTDVFGYGVMLLEL 333
GT ++APE L S ++ D++ +G++L E+
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 149
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 150 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 202
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGE--LQFQTEVEMIS 187
+V ++F +LG+G FGKV R G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAA 246
H L L+ T V + G + L RER ++ + + ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS---- 116
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
L YLH +++RD+K N++LD++ + DFGL K D GT +
Sbjct: 117 -ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEY 171
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE L D +G GV++ E++ G+ F
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGE--LQFQTEVEMIS 187
+V ++F +LG+G FGKV R G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAA 246
H L L+ T V + G + L RER ++ + + ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS---- 116
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
L YLH +++RD+K N++LD++ + DFGL K D GT +
Sbjct: 117 -ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEY 171
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE L D +G GV++ E++ G+ F
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 131 QVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGE--LQFQTEVEMIS 187
+V ++F +LG+G FGKV R G A+K L++E + TE ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL-RERGQSQPPLNWSVRKQIALGAA 246
H L L+ T V + G + L RER ++ + + ++
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVS---- 116
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
L YLH +++RD+K N++LD++ + DFGL K D GT +
Sbjct: 117 -ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEY 171
Query: 307 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE L D +G GV++ E++ G+ F
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 52/222 (23%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G+G +G+V++G G VAVK ++E++ E TE+ M H N+L
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE----TELYNTVMLRHENILGFIAS 99
Query: 201 CMTP----TERLLVYPFMVNGSV-----------ASCLRERGQSQPPLNWSVRKQIALGA 245
MT T+ L+ + GS+ SCLR I L
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR----------------IVLSI 143
Query: 246 ARGLAYLH-----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 300
A GLA+LH P I HRD+K+ NIL+ + + + D GLA + +
Sbjct: 144 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 203
Query: 301 R---GTIGHIAPEYL------STGKSSEKTDVFGYGVMLLEL 333
GT ++APE L S ++ D++ +G++L E+
Sbjct: 204 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 177
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 230
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 24/234 (10%)
Query: 120 GQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ 178
G+LK + ++ + +GRG +G V K G ++AVKR++ + + Q
Sbjct: 7 GKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ 66
Query: 179 FQTEVEMIS--------MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQ 230
+++++ + + L R G C E + V S L + +
Sbjct: 67 LLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEE 125
Query: 231 PPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 290
+ +I L + L +L ++ KIIHRD+K +NILLD + DFG++ +
Sbjct: 126 ------ILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL- 176
Query: 291 YKDTHVTTAVRGTIGHIAPEYLSTGKSSE----KTDVFGYGVMLLELITGQRAF 340
D+ T G ++APE + S + ++DV+ G+ L EL TG+ +
Sbjct: 177 -VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 178 QFQTEVEMISMAVHRNLLRLRGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPLNW 235
Q E+ ++ H N+++L P E +V+ + G V + S+ +
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARF 141
Query: 236 SVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH 295
+ I +G+ YLH KIIHRD+K +N+L+ E+ + DFG++ D
Sbjct: 142 YFQDLI-----KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 296 VTTAVRGTIGHIAPEYLSTGK---SSEKTDVFGYGVMLLELITGQRAF 340
++ V GT +APE LS + S + DV+ GV L + GQ F
Sbjct: 194 LSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 179 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVAS------CLRERGQSQPP 232
F+ E+++I+ + L G E ++Y +M N S+ L + P
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 292
+ V K I +Y+H+ + I HRDVK +NIL+D+ + DFG ++ M
Sbjct: 150 I--QVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYM--V 203
Query: 293 DTHVTTAVRGTIGHIAPEYLSTGKSSE--KTDVFGYGVMLLELITGQRAFDL 342
D + + RGT + PE+ S S K D++ G+ L + F L
Sbjct: 204 DKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ ++ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 149 GKVYKGRLTDGSLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-- 205
G+++KGR G+ + VK LK + + F E + + H N+L + G C +P
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 206 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDV 265
L+ +M GS+ + L E ++ S + AL ARG+A+LH +P I +
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFV--VDQSQAVKFALDMARGMAFLHT-LEPLIPRHAL 139
Query: 266 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT---- 321
+ ++++DE+ A + + D K + + +APE L K E T
Sbjct: 140 NSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQ--KKPEDTNRRS 191
Query: 322 -DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXXVDSDMEG---- 376
D++ + V+L EL+T + F A L+N + M + +EG
Sbjct: 192 ADMWSFAVLLWELVTREVPF--ADLSNMEIGMKV------------------ALEGLRPT 231
Query: 377 --NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 412
I V +L+++ C P +RPK +V +LE
Sbjct: 232 IPPGISPHVSKLMKI---CMNEDPAKRPKFDMIVPILE 266
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 8/208 (3%)
Query: 137 FSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 195
++ +G G +G V + VA+K++ Q + E++++ H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 196 RLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+R T + ++V + + L + +SQ N + RGL Y+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHI-CYFLYQILRGLKYIHS- 162
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLS 313
++HRD+K +N+L++ + + DFGLA++ D + H T T + APE +
Sbjct: 163 --ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 314 TGKSSEKT-DVFGYGVMLLELITGQRAF 340
K K+ D++ G +L E+++ + F
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT +APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L + L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L + L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L + L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++APE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 94/223 (42%), Gaps = 28/223 (12%)
Query: 130 LQVATDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRLKEER--TQGGELQFQTEVEM 185
Q +D + LG G +G+V K +LT G+ A+K +K+ T EV +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 186 ISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGA 245
+ H N+++L F LV G + + R + + KQ+
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVL--- 131
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR- 301
G YLH H I+HRD+K N+LL+ + + DFGL+ H +
Sbjct: 132 -SGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKM 180
Query: 302 ----GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
GT +IAPE L K EK DV+ GV+L L+ G F
Sbjct: 181 KERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 134 TDNFSNRNILGRGGFGKVY--KGRLTDGSLVAVKRLKEER--TQGGELQFQTEVEMISMA 189
+D + LG G +G+V K +LT G+ A+K +K+ T EV ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 190 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
H N+++L F LV G + + R + + KQ+ G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVL----SGT 117
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVR----- 301
YLH H I+HRD+K N+LL+ + + DFGL+ H +
Sbjct: 118 TYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKERL 167
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
GT +IAPE L K EK DV+ GV+L L+ G F
Sbjct: 168 GTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L K ++ + E+ ++ H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 94 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 151
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 152 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 204
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V + G + S LR G+ P QI L Y
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+++D++ V DFG AK + + T + GT ++APE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 210
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQFQTEVEMISMAVHR 192
D F LG G FG+V + + G+ A+K L K++ + +++ + I AV+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 193 NLLRLRGFCMTPTERL-LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L F L +V ++ G + S LR G+ P QI L Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 311
LH +I+RD+K N+L+D++ V DFG AK + + T + GT ++AP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPAI 209
Query: 312 LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + ++ D + GV++ E+ G F
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 87 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 144
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 145 YIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 197
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 53/241 (21%)
Query: 128 RELQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMI 186
+ +V D+ LGRG +G V K R + G ++AVKR++ + + +++ I
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLD-I 102
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVN--------GSVASCLR-------------- 224
SM R + PF V G V C+
Sbjct: 103 SM------------------RTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVI 144
Query: 225 ERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 284
++GQ+ P + +IA+ + L +LH +IHRDVK +N+L++ + + DFG
Sbjct: 145 DKGQTIPE---DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFG 199
Query: 285 LAKLMDYKDTHVTTAVRGTIGHIAPEY----LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
++ + D+ T G ++APE L+ S K+D++ G+ ++EL + +
Sbjct: 200 ISGYL--VDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 257
Query: 341 D 341
D
Sbjct: 258 D 258
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 88 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 145
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 198
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 88 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 145
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 198
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 87 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 144
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 145 YIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 197
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXV-ATRWYRAPE 192
Query: 311 Y-LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 89 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 147 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 199
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 87 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 144
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 145 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 197
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 81 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 138
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 139 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 191
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 84 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 141
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 142 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 194
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 102 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 159
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 160 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 212
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 87 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 144
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 145 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 197
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 25/226 (11%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVE 184
+R+L++ +++ ++GRG FG+V R V +L K E + + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 185 MISMAVHRNLLRLRGFCMTPTERLL--VYPFMVNGSVASCLRERGQSQPPLNW----SVR 238
I MA + ++ F +R L V +M G + + + P W +
Sbjct: 126 DI-MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAE 181
Query: 239 KQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 298
+AL A + + IHRDVK N+LLD+ + DFG M+ +
Sbjct: 182 VVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 299 AVRGTIGHIAPEYLST----GKSSEKTDVFGYGVMLLELITGQRAF 340
GT +I+PE L + G + D + GV L E++ G F
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 84 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 141
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 142 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 194
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 88 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 145
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 198
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 25/226 (11%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVE 184
+R+L++ +++ ++GRG FG+V R V +L K E + + F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 185 MISMAVHRNLLRLRGFCMTPTERLL--VYPFMVNGSVASCLRERGQSQPPLNW----SVR 238
I MA + ++ F +R L V +M G + + + P W +
Sbjct: 121 DI-MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAE 176
Query: 239 KQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 298
+AL A + + IHRDVK N+LLD+ + DFG M+ +
Sbjct: 177 VVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 227
Query: 299 AVRGTIGHIAPEYLST----GKSSEKTDVFGYGVMLLELITGQRAF 340
GT +I+PE L + G + D + GV L E++ G F
Sbjct: 228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 79 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 136
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 137 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 189
Query: 311 Y-LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 101 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 158
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 159 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 211
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 78 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 135
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 188
Query: 311 Y-LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 84 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 141
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 142 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 194
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 10/210 (4%)
Query: 135 DNFSNRNILGRGGFGKVY-KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN 193
D F + LG G FG V+ + G +K + ++R+Q Q + E+E++ H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 194 LLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH 253
++++ +V G + + L+ ++ LAY H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 254 DHCDPKIIHRDVKAANILLDE---EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
++H+D+K NIL + + DFGLA+L D H T A GT ++APE
Sbjct: 142 SQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEHSTNAA-GTALYMAPE 196
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ K D++ GV++ L+TG F
Sbjct: 197 VFKRDVTF-KCDIWSAGVVMYFLLTGCLPF 225
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 143 LGRGGFGKVYKGRLTDG-SLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G G +G V+K + + +VA+KR++ ++ +G E+ ++ H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 201 CMTPTERLLVYPFM---VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCD 257
+ + LV+ F + SC G P + K +GL + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSC---NGDLDP----EIVKSFLFQLLKGLGFCHSR-- 120
Query: 258 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK- 316
++HRD+K N+L++ E + DFGLA+ +A T+ + P+ L K
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 317 SSEKTDVFGYGVMLLELITGQR 338
S D++ G + EL R
Sbjct: 179 YSTSIDMWSAGCIFAELANAAR 200
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 79 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 136
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 137 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 189
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 78 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 135
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 188
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 93 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 150
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 151 YIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 203
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 94 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 151
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 152 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 204
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 94 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 151
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 152 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 204
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 25/226 (11%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQFQTEVE 184
+R+L++ +++ ++GRG FG+V R V +L K E + + F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 185 MISMAVHRNLLRLRGFCMTPTERLL--VYPFMVNGSVASCLRERGQSQPPLNW----SVR 238
I MA + ++ F +R L V +M G + + + P W +
Sbjct: 126 DI-MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAE 181
Query: 239 KQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT 298
+AL A + + IHRDVK N+LLD+ + DFG M+ +
Sbjct: 182 VVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 299 AVRGTIGHIAPEYLST----GKSSEKTDVFGYGVMLLELITGQRAF 340
GT +I+PE L + G + D + GV L E++ G F
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 101 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 158
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 159 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 211
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 93 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 150
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 151 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 203
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 102 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 159
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 160 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 212
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 105 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 162
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 163 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 215
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 80 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 137
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 138 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 190
Query: 311 Y-LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 30/227 (13%)
Query: 140 RNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 198
R +L GGF VY+ + + G A+KRL + Q M ++ H N+++
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 199 GFCM----------TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
FC T L+ + G + L+ + +S+ PL+ +I R
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCRA 148
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR------- 301
+ ++H P IIHRD+K N+LL + + DFG A + + + +A R
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 302 ----GTIGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFD 341
T + PE + S EK D++ G +L L Q F+
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L +SQ + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGL + + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 44/248 (17%)
Query: 120 GQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKG--RLTDGSLVAVKRLKE--ERTQGG 175
G++ R LR+ ++ LG+G +G V+K R T G +VAVK++ + + +
Sbjct: 1 GRVDRHVLRKYELVKK-------LGKGAYGIVWKSIDRRT-GEVVAVKKIFDAFQNSTDA 52
Query: 176 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTER--LLVYPFMVNGSVASCLRERGQSQPPL 233
+ F+ + + ++ H N++ L +R LV+ +M A R P+
Sbjct: 53 QRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI---RANILEPV 109
Query: 234 NWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYK 292
+ ++ + + + YLH ++HRD+K +NILL+ E V DFGL++ ++ +
Sbjct: 110 H---KQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163
Query: 293 -------------------DTHVTTAVRGTIGHIAPEY-LSTGKSSEKTDVFGYGVMLLE 332
D + T T + APE L + K ++ D++ G +L E
Sbjct: 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGE 223
Query: 333 LITGQRAF 340
++ G+ F
Sbjct: 224 ILCGKPIF 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 88 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 145
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 198
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 84 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 141
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 142 YIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 194
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 92 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 149
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 150 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 202
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 143 LGRGGFGKV---YKGRLTDGSLVAVKRLKEERTQGGEL---QFQTEVEMISMAVHRNLLR 196
+G G +G V GR G+ VA+K+L R EL + E+ ++ H N++
Sbjct: 33 VGSGAYGAVCSAVDGR--TGAKVAIKKLY--RPFQSELFAKRAYRELRLLKHMRHENVIG 88
Query: 197 LRGFCMTPTERL-------LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
L TP E L LV PFM + ++ + + + V + + +GL
Sbjct: 89 LLD-VFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQML-----KGL 141
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
Y+H IIHRD+K N+ ++E+ E + DFGLA+ D + T + AP
Sbjct: 142 RYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAP 194
Query: 310 E-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
E L+ + ++ D++ G ++ E+ITG+ F
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 131 QVATDNF---SNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMIS 187
Q A ++F S ILG G FG+V+K T L ++ + R + + + E+ +++
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSV-RKQIALGAA 246
H NL++L + + +LV ++ G + + + + L+ + KQI
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI----C 197
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILL--DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
G+ ++H I+H D+K NIL + + + DFGLA+ YK GT
Sbjct: 198 EGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLAR--RYKPREKLKVNFGTP 252
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE ++ S TD++ GV+ L++G F
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 139 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 139 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 137 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 193
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + D+GLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 119 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 175
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+G+G +G+V+ G+ G VAVK T+ +TE+ + H N+L GF
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFT--TEEASWFRETEIYQTVLMRHENIL---GFIA 98
Query: 203 TP-------TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
T+ L+ + NGS+ L+ L+ ++A + GL +LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 256 C-----DPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKDTHVTTAVR-GTIGHI 307
P I HRD+K+ NIL+ + + D GLA + D + + R GT ++
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 308 APEYLSTG------KSSEKTDVFGYGVMLLEL 333
PE L +S D++ +G++L E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 129 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 185
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 123 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 179
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQ-FQTEV 183
++++++ ++F ++GRG FG+V +L + V ++ K E + E F+ E
Sbjct: 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER 125
Query: 184 EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCL---RERGQSQPPLNWSVRKQ 240
+++ + + L LV + V G + + L +R + +
Sbjct: 126 DVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 241 IALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG-LAKLMDYKDTHVTTA 299
IA+ + L Y +HRD+K NIL+D + DFG KLM+ + A
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 300 VRGTIGHIAPEYLST-----GKSSEKTDVFGYGVMLLELITGQRAF 340
V GT +I+PE L G+ + D + GV + E++ G+ F
Sbjct: 237 V-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 117 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 173
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 89 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG---HI 307
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G + +
Sbjct: 147 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVATRWYR 196
Query: 308 APE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 89 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG---HI 307
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G + +
Sbjct: 147 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVATRWYR 196
Query: 308 APE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 481 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 89 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 146
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG---HI 307
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G + +
Sbjct: 147 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVATRWYR 196
Query: 308 APE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVH 191
D + +G G +G V R LT G VA+K++ + E++++ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLT-GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 192 RNLLRLRGFCMTPT----ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
N++ ++ + PT E VY +V + S L + S PL + R
Sbjct: 114 DNIIAIKDI-LRPTVPYGEFKSVY--VVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 170
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTI 304
GL Y+H ++IHRD+K +N+L++E E +GDFG+A+ + + + T T
Sbjct: 171 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 305 GHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE LS + ++ D++ G + E++ ++ F
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + + G +
Sbjct: 482 GMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQ-FQTEV 183
++E+Q+ ++F ++GRG FG+V ++ + + ++ K E + E F+ E
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 184 EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL 243
+++ + + L LV + V G + + L + P +
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
A + LH +HRD+K N+LLD + DFG M+ T ++ GT
Sbjct: 186 LAIDSIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 239
Query: 304 IGHIAPEYLST-----GKSSEKTDVFGYGVMLLELITGQRAF 340
+I+PE L GK + D + GV + E++ G+ F
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRL--KEERTQGGELQ-FQTEV 183
++E+Q+ ++F ++GRG FG+V ++ + + ++ K E + E F+ E
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 184 EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIAL 243
+++ + + L LV + V G + + L + P +
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT 303
A + LH +HRD+K N+LLD + DFG M+ T ++ GT
Sbjct: 202 LAIDSIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 255
Query: 304 IGHIAPEYLST-----GKSSEKTDVFGYGVMLLELITGQRAF 340
+I+PE L GK + D + GV + E++ G+ F
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 18/217 (8%)
Query: 135 DNFSNRNILGRGGFGKVYKGR--LTDGSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVH 191
D + +G G +G V R LT G VA+K++ + E++++ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLT-GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 192 RNLLRLRGFCMTPT----ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAAR 247
N++ ++ + PT E VY +V + S L + S PL + R
Sbjct: 113 DNIIAIKDI-LRPTVPYGEFKSVY--VVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHVTTAVRGTI 304
GL Y+H ++IHRD+K +N+L++E E +GDFG+A+ + + + T T
Sbjct: 170 GLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 305 GHIAPEY-LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE LS + ++ D++ G + E++ ++ F
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 105 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 162
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG---HI 307
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G + +
Sbjct: 163 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRWYR 212
Query: 308 APE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 102 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 159
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG---HI 307
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ H + G + +
Sbjct: 160 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYR 209
Query: 308 APE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE L+ ++ D++ G ++ EL+TG+ F
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 134 TDNFSNRNILGRGGFG--KVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH 191
+D + +G G FG ++ + +LT LVAVK + ER + Q E+ H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLT-KELVAVKYI--ERGAAIDENVQREIINHRSLRH 75
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-SQPPLNWSVRKQIALGAARGLA 250
N++R + +TPT ++ + G + + G+ S+ + ++ ++ G++
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS-----GVS 130
Query: 251 YLHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
Y H +I HRD+K N LLD + DFG +K +T GT +IA
Sbjct: 131 YCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIA 185
Query: 309 PEYLSTGKSSEK-TDVFGYGVMLLELITGQRAFD 341
PE L + K DV+ GV L ++ G F+
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 143 LGRGGFGKVYKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMA--VHRNLLRL 197
LGRG FG+V+ R+ D G AVK+++ E F+ E E+++ A ++ L
Sbjct: 82 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLE-------VFRAE-ELMACAGLTSPRIVPL 131
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA-RGLAYLHDHC 256
G + + GS+ ++E+G R LG A GL YLH
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP-----EDRALYYLGQALEGLEYLHSR- 185
Query: 257 DPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMDY----KDTHVTTAVRGTIGHIAPEY 311
+I+H DVKA N+LL + A + DFG A + KD + GT H+APE
Sbjct: 186 --RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
Query: 312 LSTGKSSEKTDVFGYGVMLLELITG 336
+ K DV+ M+L ++ G
Sbjct: 244 VLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 78 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 135
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T + APE
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRAPE 188
Query: 311 Y-LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFC 201
LG G F K + ++ +R + Q E+ + + H N+++L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT---QKEITALKLCEGHPNIVKLHEVF 75
Query: 202 MTPTERLLVYPFMVNGSVASCLRERGQ-SQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
LV + G + ++++ S+ ++ +RK ++ ++++HD +
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHD---VGV 127
Query: 261 IHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 317
+HRD+K N+L +E E + DFG A+L + + T T+ + APE L+
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGY 186
Query: 318 SEKTDVFGYGVMLLELITGQRAF 340
E D++ GV+L +++GQ F
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPF 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 135 DNFSNRNILGRGGFGKV-----------YKGRLTD----GSLVA--VKRLKEERTQGGEL 177
+N+ + ILGRG V Y ++ D GS A V+ L+E +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK---- 72
Query: 178 QFQTEVEMI-SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWS 236
EV+++ ++ H N+++L+ T T LV+ M G + L E+ L+
Sbjct: 73 ----EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEK 124
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
++I + LH I+HRD+K NILLD++ + DFG + +D +
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-- 179
Query: 297 TTAVRGTIGHIAPEYLSTGKSS------EKTDVFGYGVMLLELITGQRAF 340
+V GT ++APE + + ++ D++ GV++ L+ G F
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGT--IG 305
G+ YL + +HRD+ A N+LL + A + DFGL+K + + G +
Sbjct: 123 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 306 HIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 340
APE ++ K S K+DV+ +GV++ E + GQ+ +
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 53/239 (22%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISM 188
++V D+ LGRG +G V K R + G ++AVKR++ + + +++ ISM
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLD-ISM 60
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVN--------GSVASCLR--------------ER 226
R + PF V G V C+ ++
Sbjct: 61 ------------------RTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDK 102
Query: 227 GQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 286
GQ+ P + +IA+ + L +LH +IHRDVK +N+L++ + + DFG++
Sbjct: 103 GQTIPE---DILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS 157
Query: 287 KLMDYKDTHVTTAVRGTIGHIAPEY----LSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
+ D G ++APE L+ S K+D++ G+ ++EL + +D
Sbjct: 158 GYL--VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + + V+ I RGL
Sbjct: 78 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI-YQILRGLK 135
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T + APE
Sbjct: 136 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPE 188
Query: 311 Y-LSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 17/202 (8%)
Query: 143 LGRGGFGKVYKGRLTDG-SLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+G G +G V+K + + +VA+KR++ ++ +G E+ ++ H+N++RL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 201 CMTPTERLLVYPFM---VNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCD 257
+ + LV+ F + SC G P + K +GL + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSC---NGDLDP----EIVKSFLFQLLKGLGFCHSR-- 120
Query: 258 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK- 316
++HRD+K N+L++ E + +FGLA+ +A T+ + P+ L K
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 317 SSEKTDVFGYGVMLLELITGQR 338
S D++ G + EL R
Sbjct: 179 YSTSIDMWSAGCIFAELANAGR 200
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 305
RGL Y+H ++HRD+K AN+ ++ E+ +GDFGLA++MD +H G +
Sbjct: 131 RGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 306 --HIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ +P LS ++ D++ G + E++TG+ F
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T G VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + DF LA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 13/212 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVH 191
TD + +G+G F V + +L G A K + ++ + Q + E + + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N++RL LV+ + G + + R +QI A
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE------AV 116
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
LH H ++HRD+K N+LL + + + DFGLA + D GT G+++
Sbjct: 117 LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GDQQAWFGFAGTPGYLS 174
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE L + D++ GV+L L+ G F
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 214 MVNG-SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL 272
++NG +A+ LR +G PP ++ +QI + L HRDVK NIL+
Sbjct: 115 LINGVDLAAXLRRQGPLAPPRAVAIVRQIG-------SALDAAHAAGATHRDVKPENILV 167
Query: 273 DEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLL 331
+ A + DFG+A D K T + V GT+ + APE S ++ + D++ +L
Sbjct: 168 SADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYRADIYALTCVLY 226
Query: 332 ELITGQRAF 340
E +TG +
Sbjct: 227 ECLTGSPPY 235
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + FGLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 41/230 (17%)
Query: 135 DNFSNRNILGRGGFGKV-----------YKGRLTD----GSLVA--VKRLKEERTQGGEL 177
+N+ + ILGRG V Y ++ D GS A V+ L+E +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK---- 59
Query: 178 QFQTEVEMI-SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWS 236
EV+++ ++ H N+++L+ T T LV+ M G + L E+ L+
Sbjct: 60 ----EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEK 111
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
++I + LH I+HRD+K NILLD++ + DFG + +D +
Sbjct: 112 ETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-- 166
Query: 297 TTAVRGTIGHIAPEYLSTGKSS------EKTDVFGYGVMLLELITGQRAF 340
V GT ++APE + + ++ D++ GV++ L+ G F
Sbjct: 167 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 41/230 (17%)
Query: 135 DNFSNRNILGRGGFGKV-----------YKGRLTD----GSLVA--VKRLKEERTQGGEL 177
+N+ + ILGRG V Y ++ D GS A V+ L+E +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK---- 72
Query: 178 QFQTEVEMI-SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWS 236
EV+++ ++ H N+++L+ T T LV+ M G + L E+ L+
Sbjct: 73 ----EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSEK 124
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
++I + LH I+HRD+K NILLD++ + DFG + +D +
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-- 179
Query: 297 TTAVRGTIGHIAPEYLSTGKSS------EKTDVFGYGVMLLELITGQRAF 340
V GT ++APE + + ++ D++ GV++ L+ G F
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + D GLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 17/216 (7%)
Query: 133 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLK-EERTQGGELQFQTEVEMISMAV 190
+ D + LG G +G+VYK T VA+KR++ E +G EV ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
HRN++ L+ L++ + N L++ P ++ V K G+
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLINGVN 146
Query: 251 YLHDHCDPKIIHRDVKAANILL-----DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIG 305
+ H + +HRD+K N+LL E +GDFGLA+ T + T+
Sbjct: 147 FCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLW 202
Query: 306 HIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAF 340
+ PE L + S D++ + E++ F
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF 238
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 22/227 (9%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTD-GSLVAVKRL-KEERTQGGELQ-FQTEV 183
L+E+++ D+F ++GRG F +V ++ G + A+K + K + + GE+ F+ E
Sbjct: 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREER 112
Query: 184 EMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPP---LNWSVRKQ 240
+++ R + +L LV + V G + + L + G+ P +
Sbjct: 113 DVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIV 172
Query: 241 IALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV 300
+A+ + L Y +HRD+K NILLD + DFG + T +
Sbjct: 173 MAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVA 223
Query: 301 RGTIGHIAPEYLST-------GKSSEKTDVFGYGVMLLELITGQRAF 340
GT +++PE L G + D + GV E+ GQ F
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 143 LGRGGFGKVYKGRLTD----GSL----VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
LG+G F K++KG + G L V +K L + E F+ M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
+ G C+ E +LV F+ GS+ + L++ +N + ++A A + +L +
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC---INILWKLEVAKQLAAAMHFLEE 131
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT----AVRGTIGHIAPE 310
+ +IH +V A NILL E + G+ KL D +T ++ I + PE
Sbjct: 132 N---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD-PGISITVLPKDILQERIPWVPPE 187
Query: 311 YLSTGKS-SEKTDVFGYGVMLLELITG 336
+ K+ + TD + +G L E+ +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 143 LGRGGFGKVYKGRLTD----GSL----VAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
LG+G F K++KG + G L V +K L + E F+ M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
+ G C E +LV F+ GS+ + L++ +N + ++A A + +L +
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC---INILWKLEVAKQLAWAMHFLEE 131
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT----AVRGTIGHIAPE 310
+ +IH +V A NILL E + G+ KL D +T ++ I + PE
Sbjct: 132 N---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD-PGISITVLPKDILQERIPWVPPE 187
Query: 311 YLSTGKS-SEKTDVFGYGVMLLELITG 336
+ K+ + TD + +G L E+ +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + D GLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHSL- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPAFVAPEIV 189
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ + D +T V T +
Sbjct: 165 RGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWY 217
Query: 307 IAPEYLSTGKSSEKT-DVFGYGVMLLELITGQRAF 340
APE + T D++ G ++ EL+TG+ F
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKR-LKEERTQGGELQFQTEVEMISMAVHR 192
D F + G+G FG V G+ + G VA+K+ +++ R + ELQ ++ ++ H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH---HP 79
Query: 193 NLLRLRGFCMTPTER------LLVYPFMVNGSVASCLR---ERGQSQPPLNWSVRKQIAL 243
N+++L+ + T ER L V V ++ C R R + PP+ + K
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPI---LIKVFLF 136
Query: 244 GAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHVTTAVRG 302
R + LH + HRD+K N+L++E + + DFG AK + + +V A
Sbjct: 137 QLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV--AYIC 193
Query: 303 TIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAF 340
+ + APE + + + D++ G + E++ G+ F
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF 232
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEE-RTQGGELQFQTEVEMISMAVHR 192
+ + N + +G G +G V T L VAVK+L ++ + E+ ++ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 193 NLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA 250
N++ L TP L + ++V + + L + Q + V+ I RGL
Sbjct: 82 NVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLK 139
Query: 251 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE 310
Y+H IIHRD+K +N+ ++E+ E + D GLA+ + D +T V T + APE
Sbjct: 140 YIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYV-ATRWYRAPE 192
Query: 311 -YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+TG+ F
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 19/216 (8%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISM 188
D + LG G F V K R + G A K +K+ RT+ + EV ++
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H N++ L T+ +L+ + G + L E+ KQI G
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NG 126
Query: 249 LAYLHDHCDPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
+ YLH +I H D+K NI LLD + DFGLA +D+ + + GT
Sbjct: 127 VYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTP 181
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE ++ + D++ GV+ L++G F
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 19/216 (8%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISM 188
D + LG G F V K R + G A K +K+ RT+ + EV ++
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H N++ L T+ +L+ + G + L E+ KQI G
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NG 125
Query: 249 LAYLHDHCDPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
+ YLH +I H D+K NI LLD + DFGLA +D+ + + GT
Sbjct: 126 VYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTP 180
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE ++ + D++ GV+ L++G F
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHSL- 132
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 133 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 188
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 48/233 (20%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRG 199
ILG G G V G VAVKR+ + E++ TE + H N++R
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRY-- 74
Query: 200 FCMTPTERLLVYPF-MVNGSVASCLRERGQSQPPLNW-------SVRKQIALGAARGLAY 251
+C T+R L + N ++ + + S L S+ +QIA G+A+
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA----SGVAH 130
Query: 252 LHDHCDPKIIHRDVKAANILLD-------------EEFEAVVGDFGLAKLMDYKDTHVTT 298
LH KIIHRD+K NIL+ E ++ DFGL K +D + T
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 299 AVR---GTIGHIAPEYLSTGKS-------SEKTDVFGYGVMLLELIT-GQRAF 340
+ GT G APE L + + D+F G + +++ G+ F
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 19/216 (8%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISM 188
D + LG G F V K R + G A K +K+ RT+ + EV ++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H N++ L T+ +L+ + G + L E+ KQI G
Sbjct: 71 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NG 126
Query: 249 LAYLHDHCDPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
+ YLH +I H D+K NI LLD + DFGLA +D+ + + GT
Sbjct: 127 VYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTP 181
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE ++ + D++ GV+ L++G F
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 192
+ +F +++LG G +G V G +VA+K+++ L+ E++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 193 NLLRL----RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
N++ + R + + ++ + + + S + + + + + R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL-----RA 124
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD---YKDTHVTTAVRGTIG 305
+ LH +IHRD+K +N+L++ + V DFGLA+++D ++ T G +
Sbjct: 125 VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 306 HI------APE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE L++ K S DV+ G +L EL + F
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 143 LGRGGFGKVYKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMA--VHRNLLRL 197
LGRG FG+V+ R+ D G AVK+++ E F+ E E+++ A ++ L
Sbjct: 101 LGRGSFGEVH--RMEDKQTGFQCAVKKVRLE-------VFRAE-ELMACAGLTSPRIVPL 150
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA-RGLAYLHDHC 256
G + + GS+ ++E+G R LG A GL YLH
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP-----EDRALYYLGQALEGLEYLHSR- 204
Query: 257 DPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMDY----KDTHVTTAVRGTIGHIAPEY 311
+I+H DVKA N+LL + A + DFG A + K + GT H+APE
Sbjct: 205 --RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
Query: 312 LSTGKSSEKTDVFGYGVMLLELITG 336
+ K DV+ M+L ++ G
Sbjct: 263 VLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 192
+ +F +++LG G +G V G +VA+K+++ L+ E++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 193 NLLRL----RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
N++ + R + + ++ + + + S + + + + + R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL-----RA 124
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD---YKDTHVTTAVRGTIG 305
+ LH +IHRD+K +N+L++ + V DFGLA+++D ++ T G
Sbjct: 125 VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 306 HI------APE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
++ APE L++ K S DV+ G +L EL + F
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 24/220 (10%)
Query: 136 NFSNRNILGRGGFGKVYKG-RLTDGSLVAVK-------RLKEERTQGGELQFQTEVEMI- 186
+ ++++GRG V + G AVK RL E+ + + E ++
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
+A H +++ L + + LV+ M G + L E+ L+ + I
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA----LSEKETRSIMRSLL 210
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
+++LH + I+HRD+K NILLD+ + + DFG + ++ + + GT G+
Sbjct: 211 EAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGY 265
Query: 307 IAPEYLSTGKSS------EKTDVFGYGVMLLELITGQRAF 340
+APE L ++ D++ GV+L L+ G F
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHSL- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T T +
Sbjct: 134 RGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWY 186
Query: 307 IAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE L+ ++ D++ G ++ EL+ G+ F
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHS-- 132
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHSL- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 299
I + A + +LH ++HRD+K +NI + VGDFGL MD + T
Sbjct: 168 HIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 300 VR-----------GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI 334
GT +++PE + S K D+F G++L EL+
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 136 NFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
+F +GRGGFG V++ + D A+KR++ + + EV+ ++ H +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 195 LR-LRGFCMTPTER 207
+R + TP E+
Sbjct: 67 VRYFNAWLETPPEK 80
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 43/217 (19%)
Query: 143 LGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF- 200
+G G +G V G VA+K+L FQ+E+ + +R LL L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP--------FQSEI--FAKRAYRELLLLKHMQ 99
Query: 201 ---------CMTPTERL-------LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALG 244
TP L LV PFM E S+ + + V + +
Sbjct: 100 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEF--SEEKIQYLVYQML--- 154
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
+GL Y+H ++HRD+K N+ ++E+ E + DFGLA+ + D +T V T
Sbjct: 155 --KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TR 205
Query: 305 GHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ APE LS ++ D++ G ++ E++TG+ F
Sbjct: 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 242
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHSL- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
LG G FG V++ V V + + + E+ +++ H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 203 TPTERLLVYPFMVNGSVAS--CLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
E +L+ F+ G + + S+ + +R+ A GL ++H+H I
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ-----ACEGLKHMHEHS---I 170
Query: 261 IHRDVKAANILLDEEFEAVVG--DFGLA-KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS 317
+H D+K NI+ + + + V DFGLA KL + VTTA T APE +
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA---TAEFAAPEIVDREPV 227
Query: 318 SEKTDVFGYGVMLLELITGQRAF----DLARLANDDDVMLLDW 356
TD++ GV+ L++G F DL L N V DW
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN---VKRCDW 267
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHSL- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHSL- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHSL- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 23/222 (10%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 192
+ +F +++LG G +G V G +VA+K+++ L+ E++++ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 193 NLLRL----RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
N++ + R + + ++ + + + S + + + + + R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL-----RA 124
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT---------TA 299
+ LH +IHRD+K +N+L++ + V DFGLA+++D + T
Sbjct: 125 VKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 300 VRGTIGHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T + APE L++ K S DV+ G +L EL + F
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 30/176 (17%)
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-- 299
+ A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGD 261
Query: 300 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVX 358
R + +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 262 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 316
Query: 359 XXXXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 317 ---------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 196 RLRGFCMTPTERLLV-YPFMVNGSVASCLRER 226
L G C P L+V F G++++ LR +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 135 DNFSNRNILGRGGFGKVYK------GRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM 188
D + ++G+G F V + G+ +V V + E + E + M
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHM 82
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H +++ L + +V+ FM + + +R + + +V
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 249 LAYLHDHCDPKIIHRDVKAANILL-DEEFEAVV--GDFGLAKLMDYKDTHVTTAVR-GTI 304
L Y HD+ IIHRDVK N+LL +E A V GDFG+A + ++ + R GT
Sbjct: 143 LRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTP 197
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE + + DV+G GV+L L++G F
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 133 ATDNFSNRNIL-----GRGGFGKVYKG-RLTDGSLVAVKRLKEERT-QGGELQFQTEVEM 185
+ +NF+N IL GRG F V + + G A K LK+ R Q + E+ +
Sbjct: 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAV 81
Query: 186 ISMAVHR-NLLRLRGFCMTPTERLLVYPFMVNGSVAS-CLRERGQSQPPLNWSVR--KQI 241
+ +A ++ L +E +L+ + G + S CL E + N +R KQI
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSE-NDVIRLIKQI 140
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAVVGDFGLAKLMDYKDTHVTT 298
G+ YLH + I+H D+K NILL + + + DFG+++ K H
Sbjct: 141 L----EGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACE 189
Query: 299 --AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ GT ++APE L+ + TD++ G++ L+T F
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 143 LGRGGFGKV---YKGRLTDGSLVAVKRLKEE-RTQGGELQFQTEVEMISMAVHRNLLRLR 198
+G G +G V Y RL VAVK+L ++ + E+ ++ H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 199 GFCMTP-------TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
TP +E LV M + + ++ + S + + V + + RGL Y
Sbjct: 94 D-VFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQFLVYQLL-----RGLKY 146
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPE- 310
+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T T + APE
Sbjct: 147 IHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYRAPEI 199
Query: 311 YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
L+ ++ D++ G ++ EL+ G+ F
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 30/176 (17%)
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-- 299
+ A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGD 259
Query: 300 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVX 358
R + +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 260 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 314
Query: 359 XXXXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 315 ---------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 196 RLRGFCMTPTERLLV-YPFMVNGSVASCLRER 226
L G C P L+V F G++++ LR +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 47/219 (21%)
Query: 143 LGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF- 200
+G G +G V G VA+K+L FQ+E+ + +R LL L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP--------FQSEI--FAKRAYRELLLLKHMQ 81
Query: 201 ---------CMTPTERL-------LVYPFMVNGSVASCLRERGQSQPPLNWSVRK--QIA 242
TP L LV PFM + Q L +S K +
Sbjct: 82 HENVIGLLDVFTPASSLRNFYDFYLVMPFM---------QTDLQKIMGLKFSEEKIQYLV 132
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRG 302
+GL Y+H ++HRD+K N+ ++E+ E + DFGLA+ + D +T V
Sbjct: 133 YQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-V 185
Query: 303 TIGHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T + APE LS ++ D++ G ++ E++TG+ F
Sbjct: 186 TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 30/176 (17%)
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-- 299
+ A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 199 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGD 254
Query: 300 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVX 358
R + +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 255 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 309
Query: 359 XXXXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 310 ---------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 196 RLRGFCMTPTERLLV-YPFMVNGSVASCLRER 226
L G C P L+V F G++++ LR +
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 30/176 (17%)
Query: 242 ALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA-- 299
+ A+G+ +L K IHRD+ A NILL E+ + DFGLA+ + YKD
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGD 252
Query: 300 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVX 358
R + +APE + + ++DV+ +GV+L E+ + G + ++ + L
Sbjct: 253 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----- 307
Query: 359 XXXXXXXXXXXVDSDMEGNYI---EEEVEQLIQVALLCTQGSPMERPKMSEVVRML 411
EG + + ++ Q L C G P +RP SE+V L
Sbjct: 308 ---------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 143 LGRGGFGKVYKG------RLTDGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLL 195
LGRG FG+V + + VAVK LKE T +E++ +I + H N++
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 196 RLRGFCMTPTERLLV-YPFMVNGSVASCLRER 226
L G C P L+V F G++++ LR +
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 119
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 306
RGL Y+H IIHRD+K +N+ ++E+ E + DFGLA+ D + T T +
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 307 IAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE L+ ++ D++ G ++ EL+ G+ F
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R + G A K +K+ RT+ + EV ++ H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL----NGVYYLHSL- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD + DFGLA +D+ + + GT +APE +
Sbjct: 134 --QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTPEFVAPEIV 189
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGE-------LQFQTEVEMI 186
D + LG G G+V VA+K + + + G L +TE+E++
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
H +++++ F + +V M G L ++ L + K
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQML 123
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGT 303
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + + GT
Sbjct: 124 LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGT 178
Query: 304 IGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLAR 344
++APE L T + D + GV+L ++G F R
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 19/216 (8%)
Query: 135 DNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGEL-----QFQTEVEMISM 188
D + LG G F V K R + G A K +K+ RT+ + EV ++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H N++ L T+ +L+ + G + L E+ KQI G
Sbjct: 71 IQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQIL----NG 126
Query: 249 LAYLHDHCDPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTI 304
+ YLH +I H D+K NI LLD + DFGLA +D+ + + GT
Sbjct: 127 VYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNIFGTP 181
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE ++ + D++ GV+ L++G F
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGE-------LQFQTEVEMI 186
D + LG G G+V VA+K + + + G L +TE+E++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
H +++++ F + +V M G L ++ L + K
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQML 124
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGT 303
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + + GT
Sbjct: 125 LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGT 179
Query: 304 IGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLAR 344
++APE L T + D + GV+L ++G F R
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGE-------LQFQTEVEMI 186
D + LG G G+V VA+K + + + G L +TE+E++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
H +++++ F + +V M G L ++ L + K
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQML 124
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGT 303
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + + GT
Sbjct: 125 LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGT 179
Query: 304 IGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLAR 344
++APE L T + D + GV+L ++G F R
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGE-------LQFQTEVEMI 186
D + LG G G+V VA+K + + + G L +TE+E++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
H +++++ F + +V M G L ++ L + K
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQML 124
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGT 303
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + + GT
Sbjct: 125 LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGT 179
Query: 304 IGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLAR 344
++APE L T + D + GV+L ++G F R
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGE-------LQFQTEVEMI 186
D + LG G G+V VA+K + + + G L +TE+E++
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
H +++++ F + +V M G L ++ L + K
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQML 130
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGT 303
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + + GT
Sbjct: 131 LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGT 185
Query: 304 IGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLAR 344
++APE L T + D + GV+L ++G F R
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 135 DNFSNRNILGRGGFGKVY----KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV 190
DN+ ++++GRG +G VY K + ++ V R+ E+ + E+ +++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL--REITILNRLK 85
Query: 191 HRNLLRLRGFCMTPTERLLVYP--FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
++RL + E LL + ++V S L++ ++ L K I G
Sbjct: 86 SDYIIRLHDLIIP--EDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 249 LAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTT 298
++H+ IIHRD+K AN LL+++ + DFGLA+ ++ KD H+
Sbjct: 144 EKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVN 191
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 15/213 (7%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVH 191
TD + LG+G F V + ++ G A K + ++ + Q + E + + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N++RL LV+ + G + + R +QI
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESV------ 116
Query: 252 LHDHCDPK-IIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
+HC I+HRD+K N+LL + + + DFGLA + D GT G++
Sbjct: 117 --NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+PE L + D++ GV+L L+ G F
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGE-------LQFQTEVEMI 186
D + LG G G+V VA++ + + + G L +TE+E++
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
H +++++ F + +V M G L ++ L + K
Sbjct: 195 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQML 249
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGT 303
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + + GT
Sbjct: 250 LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGT 304
Query: 304 IGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLAR 344
++APE L T + D + GV+L ++G F R
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 21/207 (10%)
Query: 143 LGRGGFG------KVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG+G F KV G+ ++ K+L Q + + E + + H N++R
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ----KLEREARICRLLKHPNIVR 85
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L L++ + G + + R +QI A LH H
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE------AVLHCH- 138
Query: 257 DPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
++HRD+K N+LL + + + DFGLA ++ + GT G+++PE L
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLR 197
Query: 314 TGKSSEKTDVFGYGVMLLELITGQRAF 340
+ D++ GV+L L+ G F
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 134 TDNFSNRNILGRGGFGKVYKGRLTDGS-LVAVKRLKEERTQGGELQFQTEVEMISMAVHR 192
+D + +G G FG R + LVAVK + ER + + + E+ H
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSLRHP 75
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-SQPPLNWSVRKQIALGAARGLAY 251
N++R + +TPT +V + G + + G+ S+ + ++ I+ G++Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSY 130
Query: 252 LHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
H ++ HRD+K N LLD + DFG +K + +AV GT +IAP
Sbjct: 131 AHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK-ASVLHSQPKSAV-GTPAYIAP 185
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E L + K DV+ GV L ++ G F+
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGE-------LQFQTEVEMI 186
D + LG G G+V VA++ + + + G L +TE+E++
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 187 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 246
H +++++ F + +V M G L ++ L + K
Sbjct: 209 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQML 263
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGT 303
+ YLH++ IIHRD+K N+LL + E + DFG +K++ +T + + GT
Sbjct: 264 LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGT 318
Query: 304 IGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLAR 344
++APE L T + D + GV+L ++G F R
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 192
+D + +G G FG R LVAVK + ER + + E+ H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIAANVKREIINHRSLRHP 75
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-SQPPLNWSVRKQIALGAARGLAY 251
N++R + +TPT +V + G + + G+ S+ + ++ I+ G++Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSY 130
Query: 252 LHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
H ++ HRD+K N LLD + DFG +K +T GT +IAP
Sbjct: 131 CHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAP 185
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E L + K DV+ GV L ++ G F+
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 15/213 (7%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVH 191
TD + LG+G F V + ++ G A K + ++ + Q + E + + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N++RL LV+ + G + + R +QI
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESV------ 116
Query: 252 LHDHCDPK-IIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
+HC I+HRD+K N+LL + + + DFGLA + D GT G++
Sbjct: 117 --NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYL 173
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+PE L + D++ GV+L L+ G F
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 192
+D + +G G FG R LVAVK + ER + + + E+ H
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHP 74
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-SQPPLNWSVRKQIALGAARGLAY 251
N++R + +TPT +V + G + + G+ S+ + ++ I+ G++Y
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSY 129
Query: 252 LHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
H ++ HRD+K N LLD + DFG +K +T GT +IAP
Sbjct: 130 CHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAP 184
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E L + K DV+ GV L ++ G F+
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 13/212 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVH 191
TD++ LG+G F V + + T A K + ++ + Q + E + + H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
N++RL LV+ + G + + R QI + +
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQIL----ESVNH 145
Query: 252 LHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIA 308
+H H I+HRD+K N+LL + + + DFGLA + + GT G+++
Sbjct: 146 IHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GEQQAWFGFAGTPGYLS 201
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
PE L + D++ GV+L L+ G F
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRG 199
ILG G G V G VAVKR+ + E++ TE + H N++R
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRY-- 92
Query: 200 FCMTPTERLLVYPF-MVNGSVASCLRERGQSQPPLNW-------SVRKQIALGAARGLAY 251
+C T+R L + N ++ + + S L S+ +QIA G+A+
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA----SGVAH 148
Query: 252 LHDHCDPKIIHRDVKAANILLD-------------EEFEAVVGDFGLAKLMDYKDTHVTT 298
LH KIIHRD+K NIL+ E ++ DFGL K +D
Sbjct: 149 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 299 AVR---GTIGHIAPEYL---STGKSSEKTDVFGYGVMLLELIT-GQRAF 340
+ GT G APE L + + + D+F G + +++ G+ F
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 202
+GRG +G VYK + DG LK+ G + E+ ++ H N++ L+ +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 203 TPTER----LLVYPFMVNGSVASCLRERGQSQPP--LNWSVRKQIALGAARGLAYLHDHC 256
+ +R L Y + R ++ P L + K + G+ YLH +
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 257 DPKIIHRDVKAANILL----DEEFEAVVGDFGLAKLMD--YKDTHVTTAVRGTIGHIAPE 310
++HRD+K ANIL+ E + D G A+L + K V T + APE
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 311 YLSTGKSSEKT-DVFGYGVMLLELITGQRAF 340
L + K D++ G + EL+T + F
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 95/229 (41%), Gaps = 44/229 (19%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRG 199
ILG G G V G VAVKR+ + E++ TE + H N++R
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRY-- 92
Query: 200 FCMTPTERLLVYPF-MVNGSVASCLRERGQSQPPLNW-------SVRKQIALGAARGLAY 251
+C T+R L + N ++ + + S L S+ +QIA G+A+
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA----SGVAH 148
Query: 252 LHDHCDPKIIHRDVKAANILLD-------------EEFEAVVGDFGLAKLMDYKDTHVTT 298
LH KIIHRD+K NIL+ E ++ DFGL K +D
Sbjct: 149 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 299 AVR---GTIGHIAPEYL---STGKSSEKTDVFGYGVMLLELIT-GQRAF 340
+ GT G APE L + + + D+F G + +++ G+ F
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 130 LQVATDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISM 188
+V D+ LGRG +G V K R + G + AVKR++ + + ++++
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXR 88
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRE---RGQSQPPLNWSVRKQIALGA 245
V + + + + + S+ ++ +GQ+ P + +IA+
Sbjct: 89 TVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPE---DILGKIAVSI 145
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMD--YKDTHVTTAVRG 302
+ L +LH +IHRDVK +N+L++ + DFG++ L+D KD
Sbjct: 146 VKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYX 203
Query: 303 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
I PE G S K+D++ G+ +EL + +D
Sbjct: 204 APERINPELNQKGYSV-KSDIWSLGITXIELAILRFPYD 241
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 25/232 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVH 191
D++ LG G FG V+ R+T+ G+ A K + E + E++ +S+ H
Sbjct: 51 DHYDIHEELGTGAFGVVH--RVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRH 107
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L+ L E +++Y FM G + + ++ + +GL +
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCH 164
Query: 252 LHDHCDPKIIHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIA 308
+H++ +H D+K NI+ + E + DFGL +D K + VTT GT A
Sbjct: 165 MHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAA 218
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD----DVMLLDW 356
PE TD++ GV+ L++G F NDD +V DW
Sbjct: 219 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG---GENDDETLRNVKSCDW 267
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 25/232 (10%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMAVH 191
D++ LG G FG V+ R+T+ G+ A K + E + E++ +S+ H
Sbjct: 157 DHYDIHEELGTGAFGVVH--RVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRH 213
Query: 192 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 251
L+ L E +++Y FM G + + ++ + +GL +
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCH 270
Query: 252 LHDHCDPKIIHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIA 308
+H++ +H D+K NI+ + E + DFGL +D K + VTT GT A
Sbjct: 271 MHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAA 324
Query: 309 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD----DVMLLDW 356
PE TD++ GV+ L++G F NDD +V DW
Sbjct: 325 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG---GENDDETLRNVKSCDW 373
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 84/211 (39%), Gaps = 31/211 (14%)
Query: 135 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKR----LKEERTQGGELQFQTEVEMISMA 189
+F + LG G +G+V+K R DG L AVKR + + + +L E +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ- 115
Query: 190 VHRNLLRLR------GFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLN-WSVRKQIA 242
H +RL G TE + S+ G S P W +
Sbjct: 116 -HPCCVRLEQAWEEGGILYLQTE-------LCGPSLQQHCEAWGASLPEAQVWGYLRDTL 167
Query: 243 LGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRG 302
L LA+LH ++H DVK ANI L +GDFGL L++ G
Sbjct: 168 LA----LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEG 218
Query: 303 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 333
++APE L G DVF G+ +LE+
Sbjct: 219 DPRYMAPELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 94/233 (40%), Gaps = 48/233 (20%)
Query: 142 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRG 199
ILG G G V G VAVKR+ + E++ TE + H N++R
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRY-- 74
Query: 200 FCMTPTERLLVYPF-MVNGSVASCLRERGQSQPPLNW-------SVRKQIALGAARGLAY 251
+C T+R L + N ++ + + S L S+ +QIA G+A+
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA----SGVAH 130
Query: 252 LHDHCDPKIIHRDVKAANILLD-------------EEFEAVVGDFGLAKLMDYKDTHVTT 298
LH KIIHRD+K NIL+ E ++ DFGL K +D
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 299 AVR---GTIGHIAPEYLSTGKS-------SEKTDVFGYGVMLLELIT-GQRAF 340
+ GT G APE L + + D+F G + +++ G+ F
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 135 DNFSNRNILGRGGFGKVY----KGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV 190
DN+ ++++GRG +G VY K + ++ V R+ E+ + E+ +++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL--REITILNRLK 83
Query: 191 HRNLLRLRGFCMTPTERLLVYPFMVNGSVA-SCLRERGQSQPPLNWSVRKQIALGAARGL 249
++RL + P + L + +A S L++ ++ L K I G
Sbjct: 84 SDYIIRLYDL-IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGE 142
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY-KDTHVTT 298
++H+ IIHRD+K AN LL+++ V DFGLA+ ++ KDT++
Sbjct: 143 NFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN 189
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 143 LGRGGFGKVYKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMA--VHRNLLRL 197
LGRG FG+V+ R+ D G AVK+++ E F+ E E+++ A ++ L
Sbjct: 80 LGRGSFGEVH--RMKDKQTGFQCAVKKVRLE-------VFRVE-ELVACAGLSSPRIVPL 129
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA-RGLAYLHDHC 256
G + + GS+ +++ G P R LG A GL YLH
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLP----EDRALYYLGQALEGLEYLHTR- 183
Query: 257 DPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMD----YKDTHVTTAVRGTIGHIAPEY 311
+I+H DVKA N+LL + A + DFG A + K + GT H+APE
Sbjct: 184 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 312 LSTGKSSEKTDVFGYGVMLLELITG 336
+ K D++ M+L ++ G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSLV--AVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
++ N +GRG +G+V K + G+ + A K++ + + + +F+ E+E++ H N+
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDHPNI 68
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
+RL T+ LV G L ER + S +I +AY H
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 255 HCDPKIIHRDVKAANILL-----DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
+ HRD+K N L D + + DFGLA +K + GT +++P
Sbjct: 125 L---NVAHRDLKPENFLFLTDSPDSPLKLI--DFGLAA--RFKPGKMMRTKVGTPYYVSP 177
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 353
+ L G + D + GVM+ L+ G F D +VML
Sbjct: 178 QVLE-GLYGPECDEWSAGVMMYVLLCGYPPFS---APTDXEVML 217
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 137 FSNRNILGRGGFGKVYKGRLTDGSLV--AVKRLKEERTQGGELQFQTEVEMISMAVHRNL 194
++ N +GRG +G+V K + G+ + A K++ + + + +F+ E+E++ H N+
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVD-RFKQEIEIMKSLDHPNI 85
Query: 195 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD 254
+RL T+ LV G L ER + S +I +AY H
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 255 HCDPKIIHRDVKAANILL-----DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
+ HRD+K N L D + + DFGLA +K + GT +++P
Sbjct: 142 L---NVAHRDLKPENFLFLTDSPDSPLKLI--DFGLAA--RFKPGKMMRTKVGTPYYVSP 194
Query: 310 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 353
+ L G + D + GVM+ L+ G F D +VML
Sbjct: 195 QVLE-GLYGPECDEWSAGVMMYVLLCGYPPFS---APTDXEVML 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R L A K +K+ +++ + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L ++ S KQI G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLHT-- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
KI H D+K NI LLD+ + DFGLA + +D + GT +APE +
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R L A K +K+ +++ + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L ++ S KQI G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLHT-- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
KI H D+K NI LLD+ + DFGLA + +D + GT +APE +
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R L A K +K+ +++ + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L ++ S KQI G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLHT-- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
KI H D+K NI LLD+ + DFGLA + +D + GT +APE +
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R L A K +K+ +++ + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L ++ S KQI G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLHT-- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
KI H D+K NI LLD+ + DFGLA + +D + GT +APE +
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 21/207 (10%)
Query: 143 LGRGGFG------KVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG+G F KV G+ ++ K+L Q + + E + + H N++R
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ----KLEREARICRLLKHPNIVR 74
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L L++ + G + + R +QI A LH H
Sbjct: 75 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE------AVLHCH- 127
Query: 257 DPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 313
++HR++K N+LL + + + DFGLA ++ + GT G+++PE L
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLR 186
Query: 314 TGKSSEKTDVFGYGVMLLELITGQRAF 340
+ D++ GV+L L+ G F
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R L A K +K+ +++ + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L ++ S KQI G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLHT-- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
KI H D+K NI LLD+ + DFGLA + +D + GT +APE +
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 245 AARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMD----YKDTHVTTA 299
A GL YLH +I+H DVKA N+LL + A + DFG A + K
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 300 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 336
+ GT H+APE + K D++ M+L ++ G
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYKGRLTDGSL-VAVKRLKEERTQGGEL-----QFQTEVEMISMAVHRNLLR 196
LG G F V K R L A K +K+ +++ + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L ++ S KQI G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLHT-- 133
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
KI H D+K NI LLD+ + DFGLA + +D + GT +APE +
Sbjct: 134 -KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKNIFGTPEFVAPEIV 190
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 22/214 (10%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 200
+LG G + KV L +G AVK ++++ F+ + ++N+L L F
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 201 CMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKI 260
T LV+ + GS+ + + Q Q N ++ A L +LH I
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHTK---GI 132
Query: 261 IHRDVKAANILLD--EEFEAV-VGDFGLAKLMDYKD--THVT----TAVRGTIGHIAPEY 311
HRD+K NIL + E+ V + DF L M + T +T T G+ ++APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 312 LS--TGKSS---EKTDVFGYGVMLLELITGQRAF 340
+ T +++ ++ D++ GV+L +++G F
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 143 LGRGGFGKVYKGRLTD---GSLVAVKRLKEERTQGGELQFQTEVEMISMA--VHRNLLRL 197
+GRG FG+V+ R+ D G AVK+++ E F+ E E+++ A ++ L
Sbjct: 82 VGRGSFGEVH--RMKDKQTGFQCAVKKVRLE-------VFRVE-ELVACAGLSSPRIVPL 131
Query: 198 RGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA-RGLAYLHDHC 256
G + + GS+ +++ G P R LG A GL YLH
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLP----EDRALYYLGQALEGLEYLHTR- 185
Query: 257 DPKIIHRDVKAANILLDEE-FEAVVGDFGLAKLMDY----KDTHVTTAVRGTIGHIAPEY 311
+I+H DVKA N+LL + A + DFG A + K + GT H+APE
Sbjct: 186 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 312 LSTGKSSEKTDVFGYGVMLLELITG 336
+ K D++ M+L ++ G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 33/218 (15%)
Query: 142 ILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQG-----GELQFQTEVEMI----SMAVH 191
+LG+GGFG V+ G RLTD VA+K + R G + EV ++ + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 192 RNLLRLRGFCMTPTERLLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGL 249
++RL + T +LV P + + E+G PL + +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQ-DLFDYITEKG----PLGEGPSRCFFGQVVAAI 152
Query: 250 AYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-----TAVRGTI 304
+ H ++HRD+K NIL+D G AKL+D+ + T GT
Sbjct: 153 QHCHSR---GVVHRDIKDENILIDLR-------RGCAKLIDFGSGALLHDEPYTDFDGTR 202
Query: 305 GHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFD 341
+ PE++S + + V+ G++L +++ G F+
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 192
+D + +G G FG R LVAVK + ER + + + E+ H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHP 75
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-SQPPLNWSVRKQIALGAARGLAY 251
N++R + +TPT +V + G + + G+ S+ + ++ I+ G++Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSY 130
Query: 252 LHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
H ++ HRD+K N LLD + FG +K +T GT +IAP
Sbjct: 131 CHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAYIAP 185
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E L + K DV+ GV L ++ G F+
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 24/199 (12%)
Query: 155 RLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHR------NLLRLRGFCMTPTER 207
R++D VA+K ++++R + GEL T V M + + + ++RL + P
Sbjct: 72 RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF 131
Query: 208 LLVY--PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC-DPKIIHRD 264
+L+ P V + + ERG Q L S Q+ L A R HC + ++HRD
Sbjct: 132 VLILERPEPVQ-DLFDFITERGALQEELARSFFWQV-LEAVR-------HCHNCGVLHRD 182
Query: 265 VKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT-D 322
+K NIL+D E + DFG L+ KDT V T GT + PE++ + ++
Sbjct: 183 IKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAA 239
Query: 323 VFGYGVMLLELITGQRAFD 341
V+ G++L +++ G F+
Sbjct: 240 VWSLGILLYDMVCGDIPFE 258
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 35/225 (15%)
Query: 134 TDNFSNRNILGRGGFGKVYKGRLTDGSL-VAVKRLKEERT------QGGEL-QFQTEVEM 185
+ +S + LG G FG V+ + + V VK +K+E+ + +L + E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 186 ISMAVHRNLLRL------RGFCMTPTERLLVYPFMVNGS---VASCLRERGQSQPPLNWS 236
+S H N++++ +GF E+ +GS + + + + PL
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEK--------HGSGLDLFAFIDRHPRLDEPLASY 134
Query: 237 VRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 296
+ +Q+ +A G L D IIHRD+K NI++ E+F + DFG A ++
Sbjct: 135 IFRQLV--SAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY 187
Query: 297 TTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 340
T GTI + APE L + +++ GV L L+ + F
Sbjct: 188 TFC--GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 199
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 200 FCMTPTERLLVYPFMV----NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ +T Y +MV N + S L+++ P W RK + +H H
Sbjct: 96 YEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDP---WE-RKSYWKNMLEAVHTIHQH 146
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLST 314
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 147 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 315 GKSSEKT-----------DVFGYGVMLLELITGQRAF 340
SS + DV+ G +L + G+ F
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 134 TDNFSNRNILGRGGFGKVYKGR-LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 192
+D + +G G FG R LVAVK + ER + + + E+ H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHP 75
Query: 193 NLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQ-SQPPLNWSVRKQIALGAARGLAY 251
N++R + +TPT +V + G + + G+ S+ + ++ I+ G++Y
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSY 130
Query: 252 LHDHCDPKIIHRDVKAANILLD--EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAP 309
H ++ HRD+K N LLD + FG +K T GT +IAP
Sbjct: 131 CHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPAYIAP 185
Query: 310 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAFD 341
E L + K DV+ GV L ++ G F+
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 199
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 200 FCMTPTERLLVYPFMV----NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ +T Y +MV N + S L+++ P W RK + +H H
Sbjct: 124 YEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDP---WE-RKSYWKNMLEAVHTIHQH 174
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLST 314
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 175 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 315 GKSSEKT-----------DVFGYGVMLLELITGQRAF 340
SS + DV+ G +L + G+ F
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 199
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 200 FCMTPTERLLVYPFMV----NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ +T Y +MV N + S L+++ P W RK + +H H
Sbjct: 80 YEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDP---WE-RKSYWKNMLEAVHTIHQH 130
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLST 314
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 131 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 315 GKSSEKT-----------DVFGYGVMLLELITGQRAF 340
SS + DV+ G +L + G+ F
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 30/115 (26%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT------------- 294
G+ Y+H I+HRD+K AN L++++ V DFGLA+ +DY +
Sbjct: 168 GVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 295 -------HVTTAVRGTIGHI------APEYLSTGKS-SEKTDVFGYGVMLLELIT 335
H R GH+ APE + ++ +E DV+ G + EL+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 199
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 200 FCMTPTERLLVYPFMV----NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ +T Y +MV N + S L+++ P W RK + +H H
Sbjct: 76 YEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDP---WE-RKSYWKNMLEAVHTIHQH 126
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLST 314
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 127 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 315 GKSSEKT-----------DVFGYGVMLLELITGQRAF 340
SS + DV+ G +L + G+ F
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 199
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 200 FCMTPTERLLVYPFMV----NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ +T Y +MV N + S L+++ P W RK + +H H
Sbjct: 77 YEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDP---WE-RKSYWKNMLEAVHTIHQH 127
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLST 314
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 128 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 315 GKSSEKT-----------DVFGYGVMLLELITGQRAF 340
SS + DV+ G +L + G+ F
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYK------GRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG G F V K G+ + +RL R + + EV ++ H N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLH--- 132
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD+ + DFG+A ++ + + GT +APE +
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIV 190
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEV-EMISMAV- 190
T F +G G FG V+K + DG + A+KR K + G + Q + E+ + AV
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVL 63
Query: 191 --HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H +++R L+ + GS+A + E + + K + L RG
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 249 LAYLHDHCDPKIIHRDVKAANILL 272
L Y+H ++H D+K +NI +
Sbjct: 124 LRYIHSMS---LVHMDIKPSNIFI 144
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEV-EMISMAV- 190
T F +G G FG V+K + DG + A+KR K + G + Q + E+ + AV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVL 65
Query: 191 --HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H +++R L+ + GS+A + E + + K + L RG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 249 LAYLHDHCDPKIIHRDVKAANILL 272
L Y+H ++H D+K +NI +
Sbjct: 126 LRYIHSM---SLVHMDIKPSNIFI 146
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYK------GRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG G F V K G+ + +RL R + + EV ++ H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLH--- 125
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD+ + DFG+A ++ + + GT +APE +
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIV 183
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 199
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 200 FCMTPTERLLVYPFMV----NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ +T Y +MV N + S L+++ P W RK + +H H
Sbjct: 124 YEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDP---WE-RKSYWKNMLEAVHTIHQH 174
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLST 314
I+H D+K AN L+ + ++ DFG+A M T V + GT+ ++ PE +
Sbjct: 175 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 315 GKSSEKT-----------DVFGYGVMLLELITGQRAF 340
SS + DV+ G +L + G+ F
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEV-EMISMAV- 190
T F +G G FG V+K + DG + A+KR K + G + Q + E+ + AV
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVL 65
Query: 191 --HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H +++R L+ + GS+A + E + + K + L RG
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 249 LAYLHDHCDPKIIHRDVKAANILL 272
L Y+H ++H D+K +NI +
Sbjct: 126 LRYIHSM---SLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 134 TDNFSNRNILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQTEV-EMISMAV- 190
T F +G G FG V+K + DG + A+KR K + G + Q + E+ + AV
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK--KPLAGSVDEQNALREVYAHAVL 67
Query: 191 --HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H +++R L+ + GS+A + E + + K + L RG
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 249 LAYLHDHCDPKIIHRDVKAANILL 272
L Y+H ++H D+K +NI +
Sbjct: 128 LRYIHSM---SLVHMDIKPSNIFI 148
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 208 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKA 267
L++ M G + S ++ERG + +G A + +LH H I HRDVK
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA--IQFLHSH---NIAHRDVKP 156
Query: 268 ANILL-DEEFEAVVG--DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVF 324
N+L +E +AV+ DFG AK + + T T ++APE L K + D++
Sbjct: 157 ENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMW 213
Query: 325 GYGVMLLELITGQRAF 340
GV++ L+ G F
Sbjct: 214 SLGVIMYILLCGFPPF 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 11/136 (8%)
Query: 208 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKA 267
L++ M G + S ++ERG + +G A + +LH H I HRDVK
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA--IQFLHSH---NIAHRDVKP 137
Query: 268 ANILL-DEEFEAVVG--DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVF 324
N+L +E +AV+ DFG AK + + T T ++APE L K + D++
Sbjct: 138 ENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMW 194
Query: 325 GYGVMLLELITGQRAF 340
GV++ L+ G F
Sbjct: 195 SLGVIMYILLCGFPPF 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)
Query: 143 LGRGGFGKVYK------GRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
LG G F V K G+ + +RL R + + EV ++ H N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC 256
L T+ +L+ + G + L E+ KQI G+ YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLH--- 146
Query: 257 DPKIIHRDVKAANI-LLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 312
+I H D+K NI LLD+ + DFG+A ++ + + GT +APE +
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIV 204
Query: 313 STGKSSEKTDVFGYGVMLLELITGQRAF 340
+ + D++ GV+ L++G F
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAV-VGDFGLAKLMDYKDTHVTTAVRG 302
+ + YLH ++HRD+K +NIL +E E++ + DFG AK + ++ + T
Sbjct: 127 KTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY- 182
Query: 303 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T +APE L D++ GV+L ++TG F
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 25/218 (11%)
Query: 132 VATDNFSNRNILGRGGFGK----VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMIS 187
V +D + + +G G + + V+K + ++ + + K + ++ E+ ++
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI-------LLR 76
Query: 188 MAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVA-SCLRERGQSQPPLNWSVRKQIALGAA 246
H N++ L+ LV M G + LR++ S+ ++ +
Sbjct: 77 YGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IG 131
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAV-VGDFGLAKLMDYKDTHVTTAVRG 302
+ + YLH ++HRD+K +NIL +E E + + DFG AK + ++ + T
Sbjct: 132 KTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY- 187
Query: 303 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T +APE L E D++ G++L ++ G F
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 16/216 (7%)
Query: 135 DNFSNRNILGRGGFGKVYK------GRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM 188
D + ++G+G F V + G+ +V V + E + E + M
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHM 82
Query: 189 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARG 248
H +++ L + +V+ FM + + +R + + +V
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 249 LAYLHDHCDPKIIHRDVKAANILL-DEEFEAVV--GDFGLAKLMDYKDTHVTTAVR-GTI 304
L Y HD+ IIHRDVK +LL +E A V G FG+A + ++ + R GT
Sbjct: 143 LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTP 197
Query: 305 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+APE + + DV+G GV+L L++G F
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 42/222 (18%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 199
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 200 FCMTPTERLLVYPFMV----NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ +T Y +MV N + S L+++ P W RK + +H H
Sbjct: 96 YEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDP---WE-RKSYWKNMLEAVHTIHQH 146
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD------YKDTHVTTAVRGTIGHIAP 309
I+H D+K AN L+ + ++ DFG+A M KD+ V GT+ ++ P
Sbjct: 147 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQV-----GTVNYMPP 197
Query: 310 EYLSTGKSSEKT-----------DVFGYGVMLLELITGQRAF 340
E + SS + DV+ G +L + G+ F
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 27/231 (11%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQT----- 181
+ EL ++ + + G +G V G ++G VA+KR+ + G + +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 182 -----EVEMISMAVHRNLLRLRGFCMTPTE----RLLVYPFMVNGSVASCLRERGQSQPP 232
E+ +++ H N+L LR + E +L + ++ +A + ++ P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMD 290
+ I L LH + ++HRD+ NILL + + + DF LA+ D
Sbjct: 134 ------QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 291 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEK-TDVFGYGVMLLELITGQRAF 340
TH T + APE + K K D++ G ++ E+ + F
Sbjct: 188 ANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 246 ARGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAV-VGDFGLAKLMDYKDTHVTTAVR 301
+ + YLH ++HRD+K +NIL +E E + + DFG AK + ++ + T
Sbjct: 131 GKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 302 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T +APE L E D++ G++L ++ G F
Sbjct: 188 -TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 27/231 (11%)
Query: 127 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQT----- 181
+ EL ++ + + G +G V G ++G VA+KR+ + G + +
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 182 -----EVEMISMAVHRNLLRLRGFCMTPTE----RLLVYPFMVNGSVASCLRERGQSQPP 232
E+ +++ H N+L LR + E +L + ++ +A + ++ P
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 233 LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMD 290
+ I L LH + ++HRD+ NILL + + + DF LA+ D
Sbjct: 134 ------QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 291 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEK-TDVFGYGVMLLELITGQRAF 340
TH T + APE + K K D++ G ++ E+ + F
Sbjct: 188 ANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 239 KQIALGAARGLAYLHDHCDPKIIHRDVKAANILL------DEEFEAVVGDFGLAKLMDYK 292
KQI+ GL Y+H C IIH D+K N+L+ + + + D G A +
Sbjct: 134 KQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WY 188
Query: 293 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
D H T +++ T + +PE L D++ ++ ELITG F+
Sbjct: 189 DEHYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 9/166 (5%)
Query: 179 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVR 238
+ E + M H +++ L + +V+ FM + + +R + + +V
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 239 KQIALGAARGLAYLHDHCDPKIIHRDVKAANILL-DEEFEAVV--GDFGLAKLMDYKDTH 295
L Y HD+ IIHRDVK +LL +E A V G FG+A + ++
Sbjct: 135 SHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESG 189
Query: 296 VTTAVR-GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
+ R GT +APE + + DV+G GV+L L++G F
Sbjct: 190 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 239 KQIALGAARGLAYLHDHCDPKIIHRDVKAANILL------DEEFEAVVGDFGLAKLMDYK 292
KQI+ GL Y+H C IIH D+K N+L+ + + + D G A +
Sbjct: 134 KQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WY 188
Query: 293 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 341
D H T +++ T + +PE L D++ ++ ELITG F+
Sbjct: 189 DEHYTNSIQ-TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
G+ +LH IIHRD+K +NI++ + + DFGLA+ + + T T +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + E D++ GV++ E+I G F
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
G+ +LH IIHRD+K +NI++ + + DFGLA+ + + T T +
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + E D++ GV++ E+I G F
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 247 RGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAV-VGDFGLAKLMDYKDTHVTTAVRG 302
+ + YLH ++HRD+K +NIL +E E++ + DFG AK + ++ + T
Sbjct: 127 KTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY- 182
Query: 303 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T +APE L D++ GV+L +TG F
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 141 NILGRGGFGKVYK----GRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR 196
++LG G +GKV + L ++ +K+ K R GE + E++++ H+N+++
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 197 LRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA--RGLAYLHD 254
L ++ + +MV ++E S P + V + GL YLH
Sbjct: 71 LVDVLYNEEKQKM---YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 255 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHVTTAVRGTIGHIAPEYLS 313
I+H+D+K N+LL + G+A+ L + +G+ PE ++
Sbjct: 128 Q---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE-IA 183
Query: 314 TGK---SSEKTDVFGYGVMLLELITGQRAFD 341
G S K D++ GV L + TG F+
Sbjct: 184 NGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
G+ +LH IIHRD+K +NI++ + + DFGLA+ + T T +
Sbjct: 136 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS--TNFMMTPYVVTRYYR 190
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + E D++ G ++ EL+ G F
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIF 223
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 143 LGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGEL-QFQTEVEMIS-MAVHRN-LLRLRG 199
+G GG KV++ + A+K + E L ++ E+ ++ + H + ++RL
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 200 FCMTPTERLLVYPFMV----NGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH 255
+ +T Y +MV N + S L+++ P W RK + +H H
Sbjct: 124 YEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDP---WE-RKSYWKNMLEAVHTIHQH 174
Query: 256 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR-GTIGHIAPEYLST 314
I+H D+K AN L+ + ++ DFG+A M T V + G + ++ PE +
Sbjct: 175 ---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 315 GKSSEKT-----------DVFGYGVMLLELITGQRAF 340
SS + DV+ G +L + G+ F
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
G+ +LH IIHRD+K +NI++ + + DFGLA+ V V T +
Sbjct: 140 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYR 194
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + E D++ G ++ E+I G F
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 227
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
G+ +LH IIHRD+K +NI++ + + DFGLA+ + + T T +
Sbjct: 139 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYR 193
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + E D++ G ++ E+I G F
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
G+ +LH IIHRD+K +NI++ + + DFGLA+ + + T T +
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + E D++ G ++ E+I G F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 38/243 (15%)
Query: 133 ATDNFSNR---------NILGRGGFGKVYKG-RLTDGSLVAVKRLKEERTQGGELQFQT- 181
+TD+FS R ++LG G +V L AVK +++ Q G ++ +
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVF 58
Query: 182 -EVEMISMAV-HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRK 239
EVEM+ HRN+L L F LV+ M GS+ S + +R N
Sbjct: 59 REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH----FNELEAS 114
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV---VGDFGLAKLMDYK---- 292
+ A L +LH+ I HRD+K NIL + + + DFGL +
Sbjct: 115 VVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS 171
Query: 293 --DTHVTTAVRGTIGHIAPEYLSTGKSS-----EKTDVFGYGVMLLELITGQRAFDLARL 345
T G+ ++APE + ++ D++ GV+L L++G F + R
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF-VGRC 230
Query: 346 AND 348
+D
Sbjct: 231 GSD 233
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
G+ +LH IIHRD+K +NI++ + + DFGLA+ + + T T +
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + E D++ G ++ E+I G F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHV 296
+I + YLH I HRDVK N+L + + DFG AK ++
Sbjct: 125 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 181
Query: 297 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T T ++APE L K + D++ GV++ L+ G F
Sbjct: 182 TPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHV 296
+I + YLH I HRDVK N+L + + DFG AK ++
Sbjct: 126 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 182
Query: 297 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T T ++APE L K + D++ GV++ L+ G F
Sbjct: 183 TPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHV 296
+I + YLH I HRDVK N+L + + DFG AK ++
Sbjct: 127 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 183
Query: 297 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T T ++APE L K + D++ GV++ L+ G F
Sbjct: 184 TPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 248 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI 307
G+ +LH IIHRD+K +NI++ + + DFGLA+ + + T T +
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 308 APEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
APE + E D++ G ++ E+I G F
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHV 296
+I + YLH I HRDVK N+L + + DFG AK ++
Sbjct: 165 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 297 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T T ++APE L K + D++ GV++ L+ G F
Sbjct: 222 TPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHV 296
+I + YLH I HRDVK N+L + + DFG AK ++
Sbjct: 120 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 176
Query: 297 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T T ++APE L K + D++ GV++ L+ G F
Sbjct: 177 TPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 240 QIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV---GDFGLAKLMDYKDTHV 296
+I + YLH I HRDVK N+L + + DFG AK ++
Sbjct: 119 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 297 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 340
T T ++APE L K + D++ GV++ L+ G F
Sbjct: 176 TPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,593,286
Number of Sequences: 62578
Number of extensions: 480063
Number of successful extensions: 3700
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 1143
Number of HSP's gapped (non-prelim): 1226
length of query: 460
length of database: 14,973,337
effective HSP length: 102
effective length of query: 358
effective length of database: 8,590,381
effective search space: 3075356398
effective search space used: 3075356398
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)