Query 012613
Match_columns 460
No_of_seqs 131 out of 1298
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 12:52:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012613.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012613hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1E-70 3.4E-75 539.1 36.5 437 9-459 8-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.2E-65 1.1E-69 510.6 37.4 441 12-460 6-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 4.7E-62 1.6E-66 486.0 44.4 439 12-459 4-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.6E-62 8.8E-67 484.7 36.0 433 13-459 6-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 4E-59 1.4E-63 463.2 40.2 425 13-458 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 6.3E-46 2.2E-50 366.8 33.6 397 12-458 10-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 4.9E-46 1.7E-50 364.8 25.6 355 13-456 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 7.4E-44 2.5E-48 350.7 26.4 378 15-457 1-399 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 5.2E-43 1.8E-47 344.9 22.8 375 15-457 1-400 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1E-41 3.5E-46 335.8 28.7 377 14-459 20-414 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 4.5E-41 1.5E-45 329.7 30.0 376 15-459 5-399 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 1.5E-41 5.2E-46 332.7 22.2 376 15-458 1-382 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2.2E-40 7.4E-45 328.6 28.1 372 13-458 19-435 (441)
14 2p6p_A Glycosyl transferase; X 100.0 2.1E-39 7E-44 316.0 28.8 352 15-457 1-378 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.6E-39 5.5E-44 321.6 27.8 376 13-457 6-398 (430)
16 4fzr_A SSFS6; structural genom 100.0 2.4E-38 8.1E-43 310.0 20.3 360 7-454 8-396 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 2.3E-37 8E-42 302.8 24.8 353 13-458 19-397 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 7E-36 2.4E-40 291.7 22.9 356 14-458 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.1E-33 7.3E-38 276.0 26.8 366 6-459 12-409 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.9E-28 6.5E-33 235.9 26.5 310 14-420 2-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 3.4E-27 1.2E-31 202.2 14.8 160 260-437 8-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.4E-20 5E-25 181.2 25.0 339 14-459 6-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 6.8E-15 2.3E-19 134.4 18.8 116 272-402 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 6.5E-16 2.2E-20 135.3 8.4 139 271-417 26-197 (224)
25 3c48_A Predicted glycosyltrans 99.5 2.3E-11 7.8E-16 119.8 29.0 367 13-459 19-424 (438)
26 3okp_A GDP-mannose-dependent a 99.5 1.8E-12 6.2E-17 125.6 20.4 345 12-460 2-379 (394)
27 3fro_A GLGA glycogen synthase; 99.5 2E-11 6.7E-16 120.1 27.8 383 13-460 1-430 (439)
28 2jjm_A Glycosyl transferase, g 99.4 3.4E-10 1.2E-14 109.7 27.8 351 14-459 15-384 (394)
29 1v4v_A UDP-N-acetylglucosamine 99.4 7.2E-12 2.5E-16 120.8 15.1 159 272-457 197-365 (376)
30 1vgv_A UDP-N-acetylglucosamine 99.4 1.6E-11 5.6E-16 118.6 17.4 162 272-459 204-375 (384)
31 2r60_A Glycosyl transferase, g 99.4 3E-10 1E-14 113.8 26.9 373 14-459 7-458 (499)
32 2gek_A Phosphatidylinositol ma 99.4 1.5E-10 5E-15 112.6 24.0 113 332-459 262-382 (406)
33 3dzc_A UDP-N-acetylglucosamine 99.3 5.9E-12 2E-16 122.0 12.7 158 272-459 229-396 (396)
34 3ot5_A UDP-N-acetylglucosamine 99.3 2.2E-11 7.6E-16 118.2 16.0 160 272-457 223-392 (403)
35 2iuy_A Avigt4, glycosyltransfe 99.3 1.1E-10 3.9E-15 110.8 19.4 151 276-459 164-334 (342)
36 2iw1_A Lipopolysaccharide core 99.3 5.1E-11 1.7E-15 114.6 16.8 165 272-459 194-370 (374)
37 3beo_A UDP-N-acetylglucosamine 99.3 7.4E-11 2.5E-15 113.5 17.4 161 272-458 204-374 (375)
38 2x6q_A Trehalose-synthase TRET 99.2 9.3E-10 3.2E-14 107.4 21.6 111 333-460 293-414 (416)
39 3s28_A Sucrose synthase 1; gly 98.9 4.4E-08 1.5E-12 102.1 20.6 170 273-459 571-768 (816)
40 4hwg_A UDP-N-acetylglucosamine 98.9 3.3E-09 1.1E-13 102.0 9.4 161 273-457 203-374 (385)
41 3oy2_A Glycosyltransferase B73 98.9 6.5E-07 2.2E-11 87.0 24.2 166 273-459 183-389 (413)
42 1rzu_A Glycogen synthase 1; gl 98.8 3E-07 1E-11 91.5 21.5 161 274-459 291-474 (485)
43 2qzs_A Glycogen synthase; glyc 98.8 3.2E-07 1.1E-11 91.3 20.3 162 273-459 291-475 (485)
44 2hy7_A Glucuronosyltransferase 98.7 1.1E-06 3.7E-11 85.3 20.6 74 333-420 265-353 (406)
45 2vsy_A XCC0866; transferase, g 98.6 1.3E-05 4.5E-10 81.3 25.8 116 333-459 434-558 (568)
46 2xci_A KDO-transferase, 3-deox 98.6 1.2E-05 4E-10 77.0 22.3 96 335-437 262-364 (374)
47 2f9f_A First mannosyl transfer 98.5 3.6E-07 1.2E-11 77.7 9.8 133 274-420 23-163 (177)
48 4gyw_A UDP-N-acetylglucosamine 98.0 0.00016 5.4E-09 75.1 16.4 175 271-459 520-704 (723)
49 3qhp_A Type 1 capsular polysac 97.9 9.7E-05 3.3E-09 61.4 11.2 145 274-436 2-158 (166)
50 1psw_A ADP-heptose LPS heptosy 97.9 0.00035 1.2E-08 65.9 15.6 103 15-140 1-106 (348)
51 3tov_A Glycosyl transferase fa 97.8 0.0006 2.1E-08 64.3 15.7 107 11-140 5-115 (349)
52 2bfw_A GLGA glycogen synthase; 97.8 0.0003 1E-08 60.4 12.5 78 334-420 96-182 (200)
53 3q3e_A HMW1C-like glycosyltran 97.4 0.0021 7.3E-08 64.2 14.6 138 273-419 440-588 (631)
54 3rhz_A GTF3, nucleotide sugar 97.4 0.00027 9.2E-09 66.2 7.5 110 334-456 215-336 (339)
55 3vue_A GBSS-I, granule-bound s 96.8 0.0089 3.1E-07 59.7 12.0 167 273-460 326-511 (536)
56 2gt1_A Lipopolysaccharide hept 96.7 0.043 1.5E-06 50.9 15.1 133 272-419 177-322 (326)
57 2x0d_A WSAF; GT4 family, trans 96.0 0.0064 2.2E-07 58.7 5.5 77 334-419 296-379 (413)
58 1uqt_A Alpha, alpha-trehalose- 93.9 0.62 2.1E-05 45.6 12.7 105 338-459 337-453 (482)
59 3ty2_A 5'-nucleotidase SURE; s 93.5 0.36 1.2E-05 42.5 9.0 42 12-55 9-50 (261)
60 2phj_A 5'-nucleotidase SURE; S 91.9 2.4 8.3E-05 37.0 12.1 110 15-144 2-128 (251)
61 3vue_A GBSS-I, granule-bound s 91.1 0.14 4.8E-06 51.0 4.0 39 13-53 8-54 (536)
62 2e6c_A 5'-nucleotidase SURE; S 90.6 3.6 0.00012 35.9 11.9 108 15-143 1-129 (244)
63 3nb0_A Glycogen [starch] synth 90.3 1.1 3.8E-05 45.3 9.5 107 339-459 499-632 (725)
64 1j9j_A Stationary phase surviV 89.8 4.5 0.00015 35.3 11.9 110 15-143 1-128 (247)
65 1l5x_A SurviVal protein E; str 89.7 3.3 0.00011 36.9 11.1 110 15-144 1-128 (280)
66 3t5t_A Putative glycosyltransf 89.0 6.6 0.00023 38.3 13.7 109 334-458 353-471 (496)
67 3fgn_A Dethiobiotin synthetase 87.0 2.9 0.0001 36.7 9.0 39 12-50 23-63 (251)
68 2x0d_A WSAF; GT4 family, trans 85.4 0.47 1.6E-05 45.5 3.3 39 13-51 45-88 (413)
69 2v4n_A Multifunctional protein 84.4 10 0.00034 33.2 11.0 107 15-143 2-126 (254)
70 2wqk_A 5'-nucleotidase SURE; S 84.1 6.6 0.00022 34.4 9.8 109 15-143 2-127 (251)
71 1g5t_A COB(I)alamin adenosyltr 83.7 4 0.00014 34.3 7.8 99 13-125 27-131 (196)
72 1xmp_A PURE, phosphoribosylami 82.1 18 0.00063 29.2 11.6 140 272-440 10-163 (170)
73 1ccw_A Protein (glutamate muta 81.8 1.9 6.6E-05 33.9 5.0 39 13-51 2-40 (137)
74 4dzz_A Plasmid partitioning pr 81.7 6.7 0.00023 32.8 8.8 79 15-124 1-85 (206)
75 3qxc_A Dethiobiotin synthetase 80.0 2.1 7.1E-05 37.5 5.0 36 15-50 21-58 (242)
76 3zqu_A Probable aromatic acid 77.9 2.5 8.5E-05 36.0 4.6 37 14-51 4-40 (209)
77 2vqe_B 30S ribosomal protein S 75.8 5.3 0.00018 35.0 6.2 31 114-144 158-190 (256)
78 3vot_A L-amino acid ligase, BL 74.7 26 0.00088 33.2 11.6 35 12-51 3-37 (425)
79 3qjg_A Epidermin biosynthesis 74.4 3.6 0.00012 33.8 4.6 40 14-54 5-44 (175)
80 1qzu_A Hypothetical protein MD 73.8 2.8 9.7E-05 35.5 3.9 48 6-54 11-59 (206)
81 3auf_A Glycinamide ribonucleot 73.6 8.9 0.0003 33.1 7.1 111 6-144 14-132 (229)
82 3lqk_A Dipicolinate synthase s 73.5 5.6 0.00019 33.5 5.7 41 12-53 5-46 (201)
83 1sbz_A Probable aromatic acid 72.9 4.4 0.00015 34.0 4.9 36 15-51 1-37 (197)
84 2yxb_A Coenzyme B12-dependent 72.6 3.3 0.00011 33.6 3.9 39 13-51 17-55 (161)
85 3mcu_A Dipicolinate synthase, 71.6 4.1 0.00014 34.5 4.4 38 13-51 4-42 (207)
86 4b4k_A N5-carboxyaminoimidazol 71.5 40 0.0014 27.5 11.4 139 272-439 21-173 (181)
87 1y80_A Predicted cobalamin bin 70.8 5.1 0.00017 34.0 5.0 39 13-51 87-125 (210)
88 1id1_A Putative potassium chan 70.7 3.5 0.00012 32.8 3.7 35 12-51 1-35 (153)
89 2i2x_B MTAC, methyltransferase 70.6 6.2 0.00021 34.8 5.6 40 12-51 121-160 (258)
90 4b4o_A Epimerase family protei 69.2 4.8 0.00016 36.1 4.7 32 15-50 1-32 (298)
91 3pdi_B Nitrogenase MOFE cofact 68.9 14 0.00047 35.7 8.1 88 14-142 313-400 (458)
92 3l4e_A Uncharacterized peptida 68.7 15 0.00051 31.0 7.4 46 263-308 18-63 (206)
93 1mvl_A PPC decarboxylase athal 67.6 6.5 0.00022 33.4 4.8 40 13-54 18-57 (209)
94 3cio_A ETK, tyrosine-protein k 67.1 10 0.00035 34.2 6.4 39 13-51 102-142 (299)
95 3mc3_A DSRE/DSRF-like family p 66.9 8.7 0.0003 29.9 5.2 38 14-51 15-55 (134)
96 3la6_A Tyrosine-protein kinase 66.9 12 0.00041 33.5 6.8 40 12-51 89-130 (286)
97 1kjn_A MTH0777; hypotethical p 66.8 8.9 0.00031 30.2 4.9 38 14-51 6-45 (157)
98 2gk4_A Conserved hypothetical 65.8 19 0.00065 31.0 7.5 26 25-52 28-53 (232)
99 2ejb_A Probable aromatic acid 64.1 9.1 0.00031 31.9 5.0 36 15-51 2-37 (189)
100 1p3y_1 MRSD protein; flavoprot 63.7 6 0.0002 33.2 3.8 38 13-51 7-44 (194)
101 3dm5_A SRP54, signal recogniti 63.6 16 0.00054 35.0 7.2 40 14-53 100-139 (443)
102 3ezx_A MMCP 1, monomethylamine 63.4 8.1 0.00028 33.0 4.7 40 12-51 90-129 (215)
103 2i2c_A Probable inorganic poly 62.9 5.6 0.00019 35.4 3.7 52 350-419 36-93 (272)
104 4grd_A N5-CAIR mutase, phospho 62.4 61 0.0021 26.2 10.2 139 272-439 11-163 (173)
105 1yt5_A Inorganic polyphosphate 62.1 6.3 0.00021 34.8 3.9 53 349-419 41-96 (258)
106 3dfz_A SIRC, precorrin-2 dehyd 61.0 16 0.00054 31.3 6.0 148 265-439 25-186 (223)
107 3kuu_A Phosphoribosylaminoimid 60.5 66 0.0023 26.0 10.3 141 274-442 13-166 (174)
108 3kcq_A Phosphoribosylglycinami 59.8 18 0.00061 30.8 6.1 106 8-144 2-113 (215)
109 3l7i_A Teichoic acid biosynthe 59.3 9.4 0.00032 39.4 5.2 108 339-457 605-718 (729)
110 2ywr_A Phosphoribosylglycinami 59.0 16 0.00054 31.2 5.7 102 15-144 2-111 (216)
111 1g63_A Epidermin modifying enz 58.0 8.8 0.0003 31.7 3.8 39 15-54 3-41 (181)
112 3lp6_A Phosphoribosylaminoimid 57.7 75 0.0026 25.8 11.5 138 273-438 7-155 (174)
113 3lyu_A Putative hydrogenase; t 57.2 16 0.00054 28.6 5.1 37 12-51 16-52 (142)
114 3ors_A N5-carboxyaminoimidazol 57.1 74 0.0025 25.5 10.7 138 273-438 3-153 (163)
115 3u7q_B Nitrogenase molybdenum- 56.5 85 0.0029 30.7 11.2 33 14-51 364-396 (523)
116 3qjg_A Epidermin biosynthesis 56.4 72 0.0024 26.0 9.0 113 273-397 6-142 (175)
117 2q5c_A NTRC family transcripti 55.9 52 0.0018 27.3 8.4 30 349-381 51-80 (196)
118 1u11_A PURE (N5-carboxyaminoim 55.4 84 0.0029 25.6 11.9 141 273-442 21-175 (182)
119 4ds3_A Phosphoribosylglycinami 55.1 37 0.0013 28.6 7.3 107 12-144 5-117 (209)
120 1lss_A TRK system potassium up 54.5 8 0.00027 29.8 2.9 33 13-50 3-35 (140)
121 3h4t_A Glycosyltransferase GTF 54.2 77 0.0026 29.5 10.4 90 14-141 220-310 (404)
122 1mio_B Nitrogenase molybdenum 54.0 42 0.0014 32.2 8.5 90 13-141 311-409 (458)
123 2r8r_A Sensor protein; KDPD, P 53.9 19 0.00065 30.9 5.3 38 14-51 6-43 (228)
124 2a3d_A Protein (de novo three- 53.9 11 0.00036 23.8 2.7 33 422-458 4-36 (73)
125 3llv_A Exopolyphosphatase-rela 53.7 8.8 0.0003 29.8 3.1 33 14-51 6-38 (141)
126 3oow_A Phosphoribosylaminoimid 53.3 87 0.003 25.2 12.2 139 274-441 6-158 (166)
127 3pdi_A Nitrogenase MOFE cofact 52.1 61 0.0021 31.4 9.3 93 14-141 332-425 (483)
128 3kjh_A CO dehydrogenase/acetyl 51.1 12 0.0004 32.3 3.8 37 15-51 1-37 (254)
129 2iz6_A Molybdenum cofactor car 50.9 42 0.0014 27.4 6.7 44 336-380 92-140 (176)
130 3gpi_A NAD-dependent epimerase 50.9 18 0.00062 31.9 5.1 34 13-51 2-35 (286)
131 3s2u_A UDP-N-acetylglucosamine 50.7 41 0.0014 31.1 7.6 101 273-377 3-121 (365)
132 1o4v_A Phosphoribosylaminoimid 50.5 1E+02 0.0035 25.2 13.8 138 273-439 13-162 (183)
133 3u7q_A Nitrogenase molybdenum- 50.3 28 0.00096 33.9 6.6 93 14-141 348-441 (492)
134 1mio_A Nitrogenase molybdenum 50.3 70 0.0024 31.4 9.5 36 13-53 334-369 (533)
135 1p9o_A Phosphopantothenoylcyst 49.5 13 0.00044 33.7 3.7 24 30-53 67-90 (313)
136 2g1u_A Hypothetical protein TM 49.2 25 0.00086 27.7 5.2 33 14-51 19-51 (155)
137 1qkk_A DCTD, C4-dicarboxylate 48.5 40 0.0014 26.1 6.4 62 370-436 74-135 (155)
138 3eag_A UDP-N-acetylmuramate:L- 48.0 19 0.00063 32.9 4.7 33 14-50 4-36 (326)
139 3fwz_A Inner membrane protein 47.9 10 0.00035 29.6 2.5 33 14-51 7-39 (140)
140 1pno_A NAD(P) transhydrogenase 47.9 23 0.00078 28.5 4.4 40 12-51 21-63 (180)
141 2bw0_A 10-FTHFDH, 10-formyltet 47.2 24 0.00083 32.2 5.3 40 6-50 14-53 (329)
142 1o4v_A Phosphoribosylaminoimid 46.2 1.2E+02 0.0041 24.8 9.1 105 286-419 52-158 (183)
143 4hb9_A Similarities with proba 46.2 13 0.00046 34.7 3.6 29 15-48 2-30 (412)
144 1bg6_A N-(1-D-carboxylethyl)-L 45.2 15 0.00051 33.8 3.7 34 12-50 2-35 (359)
145 1qgu_B Protein (nitrogenase mo 44.5 1.3E+02 0.0044 29.4 10.4 34 13-51 359-392 (519)
146 2ew2_A 2-dehydropantoate 2-red 44.5 15 0.00052 32.9 3.6 32 14-50 3-34 (316)
147 2lnd_A De novo designed protei 44.4 19 0.00066 24.6 3.0 50 369-418 49-100 (112)
148 3ghy_A Ketopantoate reductase 44.2 14 0.00049 33.8 3.3 34 13-51 2-35 (335)
149 1hdo_A Biliverdin IX beta redu 43.9 74 0.0025 25.9 7.7 34 14-51 3-36 (206)
150 3s40_A Diacylglycerol kinase; 43.8 61 0.0021 29.0 7.4 81 275-380 12-98 (304)
151 4g65_A TRK system potassium up 43.7 7.1 0.00024 37.8 1.1 34 13-51 2-35 (461)
152 4dll_A 2-hydroxy-3-oxopropiona 43.2 26 0.00088 31.8 4.8 33 13-50 30-62 (320)
153 1ehi_A LMDDL2, D-alanine:D-lac 43.2 22 0.00074 33.2 4.4 38 13-50 2-44 (377)
154 2q5c_A NTRC family transcripti 43.1 28 0.00096 29.0 4.7 44 95-147 129-172 (196)
155 3ia7_A CALG4; glycosysltransfe 42.6 57 0.0019 30.1 7.4 36 274-311 6-41 (402)
156 2r85_A PURP protein PF1517; AT 42.2 23 0.00078 32.1 4.4 32 14-51 2-33 (334)
157 1xq1_A Putative tropinone redu 42.0 35 0.0012 29.6 5.5 46 1-50 1-46 (266)
158 1u0t_A Inorganic polyphosphate 41.9 13 0.00043 33.8 2.5 32 346-379 72-107 (307)
159 2an1_A Putative kinase; struct 41.8 14 0.00046 33.2 2.7 32 346-379 60-95 (292)
160 2fsv_C NAD(P) transhydrogenase 41.5 30 0.001 28.5 4.2 39 13-51 45-86 (203)
161 3bul_A Methionine synthase; tr 41.3 26 0.00089 34.8 4.7 39 13-51 97-135 (579)
162 3lrx_A Putative hydrogenase; a 41.1 30 0.001 27.6 4.4 36 13-51 22-57 (158)
163 3lqk_A Dipicolinate synthase s 41.1 1.6E+02 0.0053 24.6 10.0 142 272-419 7-186 (201)
164 1p3y_1 MRSD protein; flavoprot 41.0 99 0.0034 25.6 7.7 135 273-419 9-186 (194)
165 1djl_A Transhydrogenase DIII; 41.0 31 0.001 28.5 4.2 39 13-51 44-85 (207)
166 4e5s_A MCCFLIKE protein (BA_56 40.9 45 0.0016 30.4 6.1 72 287-379 63-136 (331)
167 3dfu_A Uncharacterized protein 40.9 19 0.00065 31.0 3.3 33 13-50 5-37 (232)
168 2pju_A Propionate catabolism o 40.6 30 0.001 29.7 4.5 29 350-381 64-92 (225)
169 2bru_C NAD(P) transhydrogenase 40.6 33 0.0011 27.7 4.3 39 13-51 29-70 (186)
170 1u7z_A Coenzyme A biosynthesis 39.9 34 0.0012 29.3 4.8 22 30-51 36-57 (226)
171 2bon_A Lipid kinase; DAG kinas 39.7 93 0.0032 28.2 8.1 68 289-380 44-119 (332)
172 3trh_A Phosphoribosylaminoimid 39.7 1.5E+02 0.005 23.9 12.4 139 273-438 6-156 (169)
173 1pjq_A CYSG, siroheme synthase 39.4 1.8E+02 0.006 27.8 10.3 146 272-439 12-168 (457)
174 3kkl_A Probable chaperone prot 39.3 48 0.0017 28.7 5.8 38 14-51 3-51 (244)
175 2jk1_A HUPR, hydrogenase trans 39.2 70 0.0024 24.0 6.3 49 370-419 71-119 (139)
176 2hy5_A Putative sulfurtransfer 39.1 42 0.0014 25.6 4.8 34 18-51 5-41 (130)
177 3of5_A Dethiobiotin synthetase 38.6 33 0.0011 29.3 4.6 38 13-50 2-41 (228)
178 3qvl_A Putative hydantoin race 38.4 67 0.0023 27.8 6.5 37 15-51 2-39 (245)
179 2qv7_A Diacylglycerol kinase D 38.2 60 0.002 29.6 6.5 82 275-380 28-115 (337)
180 3k9g_A PF-32 protein; ssgcid, 38.2 31 0.0011 30.1 4.5 42 9-51 21-64 (267)
181 1e4e_A Vancomycin/teicoplanin 38.0 20 0.00069 32.8 3.3 38 13-50 2-43 (343)
182 2qs7_A Uncharacterized protein 37.9 44 0.0015 26.1 4.8 37 15-51 9-45 (144)
183 1ks9_A KPA reductase;, 2-dehyd 37.6 23 0.00079 31.3 3.6 32 15-51 1-32 (291)
184 3q0i_A Methionyl-tRNA formyltr 37.6 43 0.0015 30.4 5.3 35 12-51 5-39 (318)
185 3k96_A Glycerol-3-phosphate de 37.6 23 0.00078 32.8 3.6 35 12-51 27-61 (356)
186 3hwr_A 2-dehydropantoate 2-red 37.6 23 0.00079 32.1 3.6 31 13-48 18-48 (318)
187 3rg8_A Phosphoribosylaminoimid 37.5 1.5E+02 0.0053 23.5 11.0 136 274-438 3-148 (159)
188 1dhr_A Dihydropteridine reduct 37.3 36 0.0012 29.1 4.6 35 14-51 6-40 (241)
189 3l4b_C TRKA K+ channel protien 37.2 13 0.00045 31.5 1.7 32 15-51 1-32 (218)
190 3hn2_A 2-dehydropantoate 2-red 36.5 31 0.001 31.1 4.2 32 15-51 3-34 (312)
191 3l18_A Intracellular protease 36.4 75 0.0026 25.2 6.3 38 13-51 1-38 (168)
192 1jkx_A GART;, phosphoribosylgl 35.9 1.1E+02 0.0039 25.6 7.4 104 15-144 1-110 (212)
193 4gi5_A Quinone reductase; prot 35.7 59 0.002 28.8 5.8 38 12-49 20-60 (280)
194 3i83_A 2-dehydropantoate 2-red 35.6 29 0.00098 31.5 3.9 33 14-51 2-34 (320)
195 2raf_A Putative dinucleotide-b 35.2 29 0.00098 29.2 3.6 32 14-50 19-50 (209)
196 4e3z_A Putative oxidoreductase 35.1 43 0.0015 29.2 4.9 38 10-50 21-58 (272)
197 3gl9_A Response regulator; bet 35.0 57 0.0019 23.9 5.0 43 98-146 36-87 (122)
198 3bfv_A CAPA1, CAPB2, membrane 34.9 44 0.0015 29.4 4.8 40 12-51 79-120 (271)
199 2w36_A Endonuclease V; hypoxan 34.7 30 0.001 29.6 3.4 31 114-144 103-140 (225)
200 3end_A Light-independent proto 34.6 44 0.0015 29.9 5.0 38 14-51 41-78 (307)
201 1e2b_A Enzyme IIB-cellobiose; 34.6 95 0.0032 22.7 5.9 39 13-51 2-40 (106)
202 4h1h_A LMO1638 protein; MCCF-l 34.5 60 0.0021 29.5 5.8 27 287-313 63-89 (327)
203 3l77_A Short-chain alcohol deh 34.3 45 0.0015 28.3 4.8 33 15-50 2-34 (235)
204 4g6h_A Rotenone-insensitive NA 34.3 23 0.0008 34.5 3.2 34 13-51 41-74 (502)
205 3q2i_A Dehydrogenase; rossmann 34.2 1.9E+02 0.0064 26.3 9.4 125 273-419 14-150 (354)
206 3aek_B Light-independent proto 34.2 2.2E+02 0.0075 27.8 10.2 92 14-142 280-374 (525)
207 3ew7_A LMO0794 protein; Q8Y8U8 34.1 57 0.002 27.0 5.4 33 15-51 1-33 (221)
208 3sr3_A Microcin immunity prote 33.6 62 0.0021 29.5 5.8 72 287-379 64-137 (336)
209 3kcn_A Adenylate cyclase homol 33.6 76 0.0026 24.3 5.7 49 369-419 74-123 (151)
210 2i87_A D-alanine-D-alanine lig 33.5 21 0.00072 33.0 2.6 38 13-50 2-43 (364)
211 3g0o_A 3-hydroxyisobutyrate de 33.5 25 0.00084 31.6 3.0 33 13-50 6-38 (303)
212 2lpm_A Two-component response 33.5 21 0.00071 27.2 2.1 41 96-142 41-86 (123)
213 1z82_A Glycerol-3-phosphate de 33.4 30 0.001 31.5 3.7 32 14-50 14-45 (335)
214 3rd5_A Mypaa.01249.C; ssgcid, 33.3 58 0.002 28.7 5.5 34 15-51 16-49 (291)
215 3obb_A Probable 3-hydroxyisobu 33.2 35 0.0012 30.7 3.9 29 15-48 4-32 (300)
216 2vns_A Metalloreductase steap3 33.0 31 0.001 29.1 3.4 33 13-50 27-59 (215)
217 3e8x_A Putative NAD-dependent 32.8 63 0.0022 27.3 5.5 36 12-51 19-54 (236)
218 2p90_A Hypothetical protein CG 32.8 2.3E+02 0.0077 25.6 9.3 134 272-419 101-251 (319)
219 2a33_A Hypothetical protein; s 32.7 1E+02 0.0035 26.0 6.6 42 337-379 95-147 (215)
220 3doj_A AT3G25530, dehydrogenas 32.7 36 0.0012 30.6 4.0 34 12-50 19-52 (310)
221 1vi6_A 30S ribosomal protein S 32.6 38 0.0013 28.5 3.8 31 114-144 115-147 (208)
222 4hn9_A Iron complex transport 32.2 51 0.0017 30.0 5.0 38 101-144 109-146 (335)
223 1evy_A Glycerol-3-phosphate de 32.0 23 0.00078 32.8 2.6 30 16-50 17-46 (366)
224 1zl0_A Hypothetical protein PA 32.0 84 0.0029 28.3 6.2 74 286-380 64-139 (311)
225 1gsa_A Glutathione synthetase; 31.9 39 0.0013 30.1 4.1 37 15-51 2-41 (316)
226 3h2s_A Putative NADH-flavin re 31.8 65 0.0022 26.8 5.4 33 15-51 1-33 (224)
227 3zzm_A Bifunctional purine bio 31.7 18 0.00062 34.8 1.8 105 14-131 9-118 (523)
228 3zq6_A Putative arsenical pump 31.7 67 0.0023 29.0 5.7 43 10-52 8-52 (324)
229 3ic5_A Putative saccharopine d 31.6 39 0.0013 24.6 3.5 33 14-51 5-38 (118)
230 4h3k_B RNA polymerase II subun 31.6 2.3E+02 0.0077 23.6 9.5 36 13-51 24-59 (214)
231 1f0y_A HCDH, L-3-hydroxyacyl-C 31.4 32 0.0011 30.8 3.4 32 14-50 15-46 (302)
232 2pn1_A Carbamoylphosphate synt 31.3 52 0.0018 29.6 4.9 34 12-51 2-37 (331)
233 4fu0_A D-alanine--D-alanine li 31.3 30 0.001 31.9 3.3 38 12-49 1-42 (357)
234 2hmt_A YUAA protein; RCK, KTN, 31.2 31 0.0011 26.3 3.0 33 14-51 6-38 (144)
235 3ppi_A 3-hydroxyacyl-COA dehyd 31.0 57 0.0019 28.6 5.0 34 14-50 29-62 (281)
236 3o26_A Salutaridine reductase; 31.0 53 0.0018 29.1 4.9 36 13-51 10-45 (311)
237 4b79_A PA4098, probable short- 31.0 1.6E+02 0.0055 25.3 7.7 35 14-51 10-44 (242)
238 3afo_A NADH kinase POS5; alpha 31.0 32 0.0011 32.2 3.3 35 343-379 108-147 (388)
239 3qrx_B Melittin; calcium-bindi 31.0 12 0.00042 19.0 0.3 17 360-376 1-17 (26)
240 3gem_A Short chain dehydrogena 30.9 43 0.0015 29.1 4.1 34 15-51 27-60 (260)
241 2h31_A Multifunctional protein 30.9 3.4E+02 0.012 25.5 13.3 138 272-438 264-411 (425)
242 1iow_A DD-ligase, DDLB, D-ALA\ 30.6 65 0.0022 28.5 5.4 38 14-51 2-43 (306)
243 3cky_A 2-hydroxymethyl glutara 30.4 53 0.0018 29.1 4.7 33 13-50 3-35 (301)
244 3hh1_A Tetrapyrrole methylase 30.3 38 0.0013 25.4 3.1 14 36-49 73-86 (117)
245 4eg0_A D-alanine--D-alanine li 30.3 72 0.0025 28.6 5.7 38 14-51 13-54 (317)
246 2vo1_A CTP synthase 1; pyrimid 30.3 58 0.002 28.6 4.5 41 11-51 19-62 (295)
247 1eiw_A Hypothetical protein MT 30.2 98 0.0034 23.0 5.3 65 347-418 36-109 (111)
248 2b69_A UDP-glucuronate decarbo 30.1 67 0.0023 29.0 5.5 35 12-50 25-59 (343)
249 4gud_A Imidazole glycerol phos 30.0 83 0.0029 26.1 5.7 30 273-308 3-32 (211)
250 3dhn_A NAD-dependent epimerase 30.0 77 0.0026 26.4 5.6 33 15-51 5-37 (227)
251 1wcv_1 SOJ, segregation protei 29.9 48 0.0016 28.7 4.2 38 14-51 5-44 (257)
252 2dpo_A L-gulonate 3-dehydrogen 29.8 35 0.0012 31.0 3.4 34 12-50 4-37 (319)
253 1jx7_A Hypothetical protein YC 29.6 62 0.0021 23.8 4.3 27 25-51 15-43 (117)
254 3j20_B 30S ribosomal protein S 29.5 43 0.0015 28.0 3.6 31 114-144 111-143 (202)
255 1jay_A Coenzyme F420H2:NADP+ o 29.5 41 0.0014 28.0 3.6 31 15-50 1-32 (212)
256 1d4o_A NADP(H) transhydrogenas 29.4 56 0.0019 26.3 4.0 39 13-51 21-62 (184)
257 2vrn_A Protease I, DR1199; cys 29.4 1.1E+02 0.0039 24.7 6.4 39 12-51 7-45 (190)
258 3bch_A 40S ribosomal protein S 29.4 46 0.0016 28.9 3.8 31 114-144 151-183 (253)
259 1txg_A Glycerol-3-phosphate de 29.4 30 0.001 31.3 2.9 31 15-50 1-31 (335)
260 2nly_A BH1492 protein, diverge 29.3 2.7E+02 0.0094 23.9 8.9 37 96-140 116-155 (245)
261 3lyh_A Cobalamin (vitamin B12) 29.2 1.5E+02 0.0051 22.2 6.5 38 272-309 5-42 (126)
262 3qsg_A NAD-binding phosphogluc 29.2 30 0.001 31.2 2.8 33 13-50 23-56 (312)
263 4huj_A Uncharacterized protein 29.1 26 0.00089 29.7 2.3 33 13-50 22-54 (220)
264 2qyt_A 2-dehydropantoate 2-red 29.0 21 0.00071 32.1 1.7 33 13-50 7-45 (317)
265 1mv8_A GMD, GDP-mannose 6-dehy 29.0 52 0.0018 31.3 4.6 31 15-50 1-31 (436)
266 3kht_A Response regulator; PSI 28.9 1.8E+02 0.0061 21.6 8.7 48 370-419 80-128 (144)
267 4e12_A Diketoreductase; oxidor 28.9 45 0.0015 29.5 3.9 33 13-50 3-35 (283)
268 3md9_A Hemin-binding periplasm 28.9 50 0.0017 28.5 4.2 36 101-142 52-89 (255)
269 3ego_A Probable 2-dehydropanto 28.8 34 0.0012 30.7 3.1 32 14-51 2-33 (307)
270 3guy_A Short-chain dehydrogena 28.7 46 0.0016 28.1 3.9 34 15-51 1-34 (230)
271 4e21_A 6-phosphogluconate dehy 28.5 33 0.0011 31.7 3.0 34 12-50 20-53 (358)
272 1ny5_A Transcriptional regulat 28.5 1.2E+02 0.0042 28.1 7.1 84 370-458 71-154 (387)
273 1yb4_A Tartronic semialdehyde 28.4 42 0.0014 29.7 3.7 31 14-49 3-33 (295)
274 1pzg_A LDH, lactate dehydrogen 28.4 32 0.0011 31.4 2.9 36 10-50 5-41 (331)
275 4dmm_A 3-oxoacyl-[acyl-carrier 28.3 73 0.0025 27.8 5.2 34 14-50 27-60 (269)
276 2xj4_A MIPZ; replication, cell 28.2 64 0.0022 28.4 4.9 37 15-51 4-42 (286)
277 3otg_A CALG1; calicheamicin, T 28.2 1.2E+02 0.0043 27.8 7.2 36 274-311 22-57 (412)
278 3to5_A CHEY homolog; alpha(5)b 28.2 62 0.0021 24.9 4.1 47 370-418 86-132 (134)
279 2ywx_A Phosphoribosylaminoimid 28.2 42 0.0014 26.7 3.1 68 359-437 87-157 (157)
280 3pef_A 6-phosphogluconate dehy 28.2 41 0.0014 29.7 3.6 31 15-50 2-32 (287)
281 3qha_A Putative oxidoreductase 28.1 35 0.0012 30.4 3.1 32 14-50 15-46 (296)
282 3k3p_A D-alanine--D-alanine li 28.0 35 0.0012 31.9 3.2 47 5-51 28-78 (383)
283 2etv_A Iron(III) ABC transport 27.9 38 0.0013 31.0 3.4 30 114-143 96-126 (346)
284 4gbj_A 6-phosphogluconate dehy 27.9 49 0.0017 29.6 4.0 29 15-48 6-34 (297)
285 4h15_A Short chain alcohol deh 27.9 71 0.0024 27.9 5.0 34 14-50 10-43 (261)
286 3kbq_A Protein TA0487; structu 27.8 1.3E+02 0.0044 24.4 6.1 81 274-379 5-97 (172)
287 3d7l_A LIN1944 protein; APC893 27.7 84 0.0029 25.6 5.3 34 13-51 2-35 (202)
288 1fjh_A 3alpha-hydroxysteroid d 27.7 72 0.0025 27.3 5.0 33 15-50 1-33 (257)
289 1byi_A Dethiobiotin synthase; 27.5 63 0.0021 27.0 4.5 34 16-49 3-37 (224)
290 1qyd_A Pinoresinol-lariciresin 27.5 59 0.002 28.8 4.6 34 14-51 4-37 (313)
291 4e5v_A Putative THUA-like prot 27.4 72 0.0025 28.3 4.9 39 12-51 2-43 (281)
292 1cp2_A CP2, nitrogenase iron p 27.4 58 0.002 28.2 4.4 37 15-51 2-38 (269)
293 3dtt_A NADP oxidoreductase; st 27.4 50 0.0017 28.4 3.9 33 13-50 18-50 (245)
294 3c85_A Putative glutathione-re 27.2 32 0.0011 27.9 2.4 34 13-51 38-72 (183)
295 3goc_A Endonuclease V; alpha-b 27.2 63 0.0021 27.7 4.2 31 114-144 107-144 (237)
296 3n7t_A Macrophage binding prot 27.1 1.1E+02 0.0039 26.3 6.1 37 15-51 10-57 (247)
297 3sju_A Keto reductase; short-c 27.1 63 0.0022 28.3 4.6 35 13-50 22-56 (279)
298 1jzt_A Hypothetical 27.5 kDa p 27.1 47 0.0016 28.8 3.6 33 15-50 59-93 (246)
299 3v8b_A Putative dehydrogenase, 27.1 68 0.0023 28.3 4.8 34 14-50 27-60 (283)
300 4egf_A L-xylulose reductase; s 26.9 82 0.0028 27.3 5.3 34 14-50 19-52 (266)
301 2pju_A Propionate catabolism o 26.9 60 0.002 27.7 4.1 39 96-143 142-180 (225)
302 3rfo_A Methionyl-tRNA formyltr 26.9 96 0.0033 28.0 5.7 33 14-51 4-36 (317)
303 2h78_A Hibadh, 3-hydroxyisobut 26.7 51 0.0018 29.3 3.9 32 14-50 3-34 (302)
304 1rw7_A YDR533CP; alpha-beta sa 26.7 1.2E+02 0.004 26.0 6.2 37 15-51 4-51 (243)
305 3d3j_A Enhancer of mRNA-decapp 26.7 54 0.0019 29.5 4.0 34 15-51 133-168 (306)
306 3f67_A Putative dienelactone h 26.7 82 0.0028 26.1 5.2 36 15-50 32-67 (241)
307 1kjq_A GART 2, phosphoribosylg 26.7 1E+02 0.0035 28.4 6.2 41 5-51 3-43 (391)
308 3dqp_A Oxidoreductase YLBE; al 26.5 78 0.0027 26.3 4.9 33 15-51 1-33 (219)
309 3d3k_A Enhancer of mRNA-decapp 26.5 57 0.0019 28.5 4.0 33 15-50 86-120 (259)
310 4fgs_A Probable dehydrogenase 26.4 76 0.0026 28.0 4.9 34 14-50 28-61 (273)
311 3bbn_B Ribosomal protein S2; s 26.4 38 0.0013 29.1 2.7 31 114-144 157-189 (231)
312 2bi7_A UDP-galactopyranose mut 26.4 46 0.0016 31.0 3.7 34 13-51 2-35 (384)
313 2gf2_A Hibadh, 3-hydroxyisobut 26.2 45 0.0015 29.5 3.4 31 15-50 1-31 (296)
314 2x5n_A SPRPN10, 26S proteasome 26.2 96 0.0033 25.5 5.2 35 17-51 110-144 (192)
315 4ezb_A Uncharacterized conserv 26.1 45 0.0015 30.2 3.4 32 14-50 24-56 (317)
316 3euw_A MYO-inositol dehydrogen 26.1 3.6E+02 0.012 24.2 10.8 109 274-402 6-123 (344)
317 1v5e_A Pyruvate oxidase; oxido 26.0 2.6E+02 0.009 27.6 9.4 27 352-378 69-101 (590)
318 1nn5_A Similar to deoxythymidy 26.0 98 0.0034 25.4 5.5 42 9-50 4-45 (215)
319 3tsa_A SPNG, NDP-rhamnosyltran 25.9 1.2E+02 0.0042 27.7 6.6 31 349-381 114-145 (391)
320 2zkq_b 40S ribosomal protein S 25.9 57 0.002 29.0 3.8 31 114-144 118-150 (295)
321 3lk7_A UDP-N-acetylmuramoylala 25.9 78 0.0027 30.2 5.2 34 12-50 7-40 (451)
322 3ju3_A Probable 2-oxoacid ferr 25.8 92 0.0032 23.3 4.6 40 13-54 12-51 (118)
323 2q8p_A Iron-regulated surface 25.8 72 0.0025 27.5 4.7 31 114-144 60-91 (260)
324 3r5x_A D-alanine--D-alanine li 25.8 37 0.0013 30.3 2.8 39 13-51 2-44 (307)
325 3obi_A Formyltetrahydrofolate 25.7 1.9E+02 0.0066 25.6 7.4 115 292-433 156-272 (288)
326 3u5c_A 40S ribosomal protein S 25.7 52 0.0018 28.6 3.4 31 114-144 117-149 (252)
327 3sbx_A Putative uncharacterize 25.6 77 0.0026 26.2 4.4 34 14-47 13-49 (189)
328 3db2_A Putative NADPH-dependen 25.6 1.9E+02 0.0066 26.2 7.8 109 274-402 7-124 (354)
329 3i4f_A 3-oxoacyl-[acyl-carrier 25.6 92 0.0031 26.8 5.3 34 14-50 6-39 (264)
330 4hkt_A Inositol 2-dehydrogenas 25.5 2.5E+02 0.0084 25.1 8.5 108 274-402 5-121 (331)
331 3c24_A Putative oxidoreductase 25.4 54 0.0018 28.9 3.8 31 15-50 12-43 (286)
332 3ka7_A Oxidoreductase; structu 25.3 44 0.0015 31.3 3.4 31 15-50 1-31 (425)
333 2qx0_A 7,8-dihydro-6-hydroxyme 25.3 99 0.0034 24.7 4.8 28 275-302 3-30 (159)
334 3foj_A Uncharacterized protein 25.3 1.3E+02 0.0045 21.2 5.3 34 13-50 55-88 (100)
335 4hv4_A UDP-N-acetylmuramate--L 25.3 77 0.0026 30.7 5.1 34 11-48 19-52 (494)
336 2zyd_A 6-phosphogluconate dehy 25.3 39 0.0013 32.7 3.0 34 12-50 13-46 (480)
337 4dqx_A Probable oxidoreductase 25.3 86 0.0029 27.5 5.1 34 14-50 26-59 (277)
338 2d1p_B TUSC, hypothetical UPF0 25.2 1.2E+02 0.0042 22.5 5.3 36 16-51 4-41 (119)
339 3lf2_A Short chain oxidoreduct 25.2 86 0.003 27.1 5.1 34 14-50 7-40 (265)
340 2zat_A Dehydrogenase/reductase 25.2 98 0.0034 26.6 5.5 33 15-50 14-46 (260)
341 2gkg_A Response regulator homo 25.2 77 0.0026 23.0 4.2 47 370-419 79-125 (127)
342 3oid_A Enoyl-[acyl-carrier-pro 25.2 91 0.0031 26.9 5.2 34 14-50 3-36 (258)
343 3dfz_A SIRC, precorrin-2 dehyd 25.2 80 0.0028 26.8 4.6 35 12-51 29-63 (223)
344 3ip0_A 2-amino-4-hydroxy-6-hyd 25.2 80 0.0028 25.2 4.3 27 275-301 2-28 (158)
345 1fmt_A Methionyl-tRNA FMet for 25.1 59 0.002 29.4 4.0 34 13-51 2-35 (314)
346 4dgk_A Phytoene dehydrogenase; 25.1 34 0.0012 33.1 2.5 29 15-48 2-30 (501)
347 3imf_A Short chain dehydrogena 25.1 84 0.0029 27.0 4.9 33 15-50 6-38 (257)
348 4dim_A Phosphoribosylglycinami 24.9 66 0.0023 30.0 4.5 35 12-51 5-39 (403)
349 3i12_A D-alanine-D-alanine lig 24.9 45 0.0016 30.8 3.3 39 12-50 1-43 (364)
350 1zi8_A Carboxymethylenebutenol 24.9 94 0.0032 25.6 5.2 36 15-50 28-63 (236)
351 2y0c_A BCEC, UDP-glucose dehyd 24.7 49 0.0017 32.0 3.6 32 14-50 8-39 (478)
352 3g79_A NDP-N-acetyl-D-galactos 24.7 78 0.0027 30.6 4.9 34 13-51 17-52 (478)
353 2o8n_A APOA-I binding protein; 24.6 66 0.0023 28.2 4.0 34 15-51 80-115 (265)
354 3qvo_A NMRA family protein; st 24.6 1.6E+02 0.0054 24.7 6.6 34 15-51 23-57 (236)
355 2z1m_A GDP-D-mannose dehydrata 24.6 90 0.0031 28.0 5.3 35 13-51 2-36 (345)
356 3edm_A Short chain dehydrogena 24.5 83 0.0028 27.2 4.8 34 14-50 7-40 (259)
357 2rjn_A Response regulator rece 24.5 30 0.001 26.8 1.7 57 370-431 78-135 (154)
358 1xrs_B D-lysine 5,6-aminomutas 24.4 37 0.0013 29.8 2.3 39 13-51 119-166 (262)
359 3fkq_A NTRC-like two-domain pr 24.3 75 0.0026 29.4 4.7 41 11-51 139-181 (373)
360 3c1o_A Eugenol synthase; pheny 24.2 77 0.0026 28.2 4.7 33 15-51 5-37 (321)
361 3gg2_A Sugar dehydrogenase, UD 24.2 51 0.0018 31.6 3.6 32 15-51 3-34 (450)
362 1fy2_A Aspartyl dipeptidase; s 24.2 94 0.0032 26.5 4.9 42 263-306 24-65 (229)
363 2afh_E Nitrogenase iron protei 24.2 74 0.0025 28.0 4.5 36 16-51 4-39 (289)
364 3ko8_A NAD-dependent epimerase 24.2 1.6E+02 0.0053 25.9 6.8 32 15-50 1-32 (312)
365 2r7a_A Bacterial heme binding 24.1 68 0.0023 27.6 4.2 36 101-142 52-89 (256)
366 3h7a_A Short chain dehydrogena 24.1 88 0.003 26.9 4.9 34 14-50 6-39 (252)
367 1qo0_D AMIR; binding protein, 24.1 2.2E+02 0.0076 22.7 7.3 48 370-419 78-125 (196)
368 1f9y_A HPPK, protein (6-hydrox 24.0 88 0.003 25.0 4.3 27 275-301 2-28 (158)
369 2iz1_A 6-phosphogluconate dehy 23.9 47 0.0016 32.0 3.3 34 12-50 3-36 (474)
370 1i36_A Conserved hypothetical 23.9 42 0.0014 29.2 2.7 29 15-48 1-29 (264)
371 1zmt_A Haloalcohol dehalogenas 23.8 72 0.0025 27.4 4.2 33 15-50 1-33 (254)
372 2d1p_A TUSD, hypothetical UPF0 23.7 1.1E+02 0.0039 23.7 4.9 37 15-51 13-53 (140)
373 2r6j_A Eugenol synthase 1; phe 23.6 80 0.0028 28.1 4.7 32 16-51 13-44 (318)
374 3rkr_A Short chain oxidoreduct 23.5 94 0.0032 26.8 5.0 33 15-50 29-61 (262)
375 3tqq_A Methionyl-tRNA formyltr 23.5 66 0.0023 29.0 4.0 33 14-51 2-34 (314)
376 4edh_A DTMP kinase, thymidylat 23.4 1.1E+02 0.0039 25.5 5.3 40 12-51 4-43 (213)
377 2ixd_A LMBE-related protein; h 23.4 80 0.0027 27.2 4.4 34 15-49 5-38 (242)
378 1u9c_A APC35852; structural ge 23.4 1.4E+02 0.0046 25.1 5.8 36 15-51 6-51 (224)
379 3pdu_A 3-hydroxyisobutyrate de 23.3 54 0.0019 28.9 3.4 31 15-50 2-32 (287)
380 3nrn_A Uncharacterized protein 23.3 54 0.0019 30.7 3.6 31 15-50 1-31 (421)
381 3hn7_A UDP-N-acetylmuramate-L- 23.3 73 0.0025 31.2 4.5 34 13-50 18-51 (524)
382 3ea0_A ATPase, para family; al 23.2 68 0.0023 27.2 3.9 38 14-51 3-43 (245)
383 1ooe_A Dihydropteridine reduct 23.1 85 0.0029 26.5 4.5 33 16-51 4-36 (236)
384 3g1w_A Sugar ABC transporter; 23.1 1.3E+02 0.0043 26.3 5.9 38 272-309 4-41 (305)
385 2c5a_A GDP-mannose-3', 5'-epim 23.1 2.2E+02 0.0076 25.9 7.8 34 14-51 29-62 (379)
386 2xzm_B RPS0E; ribosome, transl 23.1 44 0.0015 28.8 2.5 31 114-144 114-146 (241)
387 2a33_A Hypothetical protein; s 23.0 1.3E+02 0.0044 25.4 5.5 33 15-47 14-50 (215)
388 3i6i_A Putative leucoanthocyan 23.0 89 0.003 28.2 4.9 37 11-51 7-43 (346)
389 2f1k_A Prephenate dehydrogenas 23.0 59 0.002 28.4 3.6 31 15-50 1-31 (279)
390 3g17_A Similar to 2-dehydropan 22.9 28 0.00096 31.1 1.4 33 14-51 2-34 (294)
391 2pzm_A Putative nucleotide sug 22.9 78 0.0027 28.4 4.4 34 13-50 19-52 (330)
392 4da9_A Short-chain dehydrogena 22.9 1.1E+02 0.0037 26.8 5.3 34 14-50 28-61 (280)
393 2gas_A Isoflavone reductase; N 22.8 70 0.0024 28.2 4.1 33 15-51 3-35 (307)
394 3tla_A MCCF; serine protease, 22.8 1.2E+02 0.004 28.2 5.6 27 287-313 94-120 (371)
395 3r8n_B 30S ribosomal protein S 22.8 54 0.0018 27.8 3.0 116 26-144 40-181 (218)
396 1ydh_A AT5G11950; structural g 22.7 70 0.0024 27.1 3.7 93 273-377 40-141 (216)
397 1tvm_A PTS system, galactitol- 22.6 1.5E+02 0.0053 21.8 5.3 40 11-50 18-58 (113)
398 3e5n_A D-alanine-D-alanine lig 22.6 53 0.0018 30.6 3.3 40 12-51 20-63 (386)
399 3psh_A Protein HI_1472; substr 22.6 75 0.0026 28.6 4.2 30 114-143 84-114 (326)
400 3czc_A RMPB; alpha/beta sandwi 22.5 93 0.0032 22.9 4.0 44 6-49 10-55 (110)
401 2rir_A Dipicolinate synthase, 22.5 1.2E+02 0.004 27.0 5.4 33 12-49 5-37 (300)
402 3rc1_A Sugar 3-ketoreductase; 22.5 1.8E+02 0.0062 26.4 6.9 110 273-401 28-146 (350)
403 2yvu_A Probable adenylyl-sulfa 22.4 1.3E+02 0.0044 24.1 5.4 39 12-50 11-49 (186)
404 2izz_A Pyrroline-5-carboxylate 22.4 37 0.0013 30.7 2.1 40 6-50 14-57 (322)
405 4fzr_A SSFS6; structural genom 22.4 1.3E+02 0.0045 27.6 6.1 36 274-311 17-52 (398)
406 3s55_A Putative short-chain de 22.3 93 0.0032 27.2 4.7 34 14-50 9-42 (281)
407 2l2q_A PTS system, cellobiose- 22.3 1.2E+02 0.004 22.3 4.5 36 15-50 5-40 (109)
408 3eme_A Rhodanese-like domain p 22.3 1.2E+02 0.0041 21.6 4.6 34 13-50 55-88 (103)
409 2oze_A ORF delta'; para, walke 22.2 84 0.0029 27.7 4.5 38 14-51 34-74 (298)
410 1mxh_A Pteridine reductase 2; 22.2 98 0.0033 26.9 4.9 32 16-50 12-43 (276)
411 4eso_A Putative oxidoreductase 22.2 96 0.0033 26.7 4.7 34 14-50 7-40 (255)
412 3ioy_A Short-chain dehydrogena 22.2 1.1E+02 0.0039 27.4 5.4 33 15-50 8-40 (319)
413 3hdg_A Uncharacterized protein 22.1 1.4E+02 0.0048 22.0 5.3 48 370-419 78-125 (137)
414 1e7w_A Pteridine reductase; di 22.1 1E+02 0.0035 27.2 5.0 32 15-49 9-40 (291)
415 3ius_A Uncharacterized conserv 22.0 80 0.0027 27.5 4.3 32 15-51 6-37 (286)
416 1n2z_A Vitamin B12 transport p 22.0 1E+02 0.0034 26.3 4.8 38 101-144 50-89 (245)
417 3l6d_A Putative oxidoreductase 22.0 45 0.0015 29.9 2.6 32 14-50 9-40 (306)
418 2rk3_A Protein DJ-1; parkinson 22.0 2.4E+02 0.0081 22.9 7.0 37 14-51 3-39 (197)
419 2wam_A RV2714, conserved hypot 22.0 2.8E+02 0.0096 25.4 7.8 131 273-419 142-291 (351)
420 2dkn_A 3-alpha-hydroxysteroid 21.9 1E+02 0.0036 26.0 4.9 32 16-50 2-33 (255)
421 1xfi_A Unknown protein; struct 21.9 86 0.003 29.0 4.5 38 14-51 212-250 (367)
422 2o6l_A UDP-glucuronosyltransfe 21.8 2.2E+02 0.0077 22.1 6.7 38 14-51 20-60 (170)
423 3pfb_A Cinnamoyl esterase; alp 21.8 1.2E+02 0.004 25.6 5.3 37 15-51 46-84 (270)
424 1y1p_A ARII, aldehyde reductas 21.7 1.5E+02 0.0052 26.3 6.3 35 12-50 9-43 (342)
425 4iin_A 3-ketoacyl-acyl carrier 21.7 1.1E+02 0.0037 26.6 5.0 33 15-50 29-61 (271)
426 3ug7_A Arsenical pump-driving 21.7 1.1E+02 0.0038 27.9 5.2 38 15-52 26-64 (349)
427 2xdo_A TETX2 protein; tetracyc 21.7 69 0.0024 29.8 3.9 34 12-50 24-57 (398)
428 3ga2_A Endonuclease V; alpha-b 21.7 76 0.0026 27.4 3.7 38 99-143 101-145 (246)
429 3v2h_A D-beta-hydroxybutyrate 21.6 91 0.0031 27.3 4.5 33 15-50 25-57 (281)
430 3o38_A Short chain dehydrogena 21.6 1E+02 0.0036 26.5 4.9 35 14-50 21-55 (266)
431 3ihm_A Styrene monooxygenase A 21.6 49 0.0017 31.3 2.9 44 3-51 7-54 (430)
432 3gl9_A Response regulator; bet 21.6 1E+02 0.0034 22.5 4.2 47 370-418 75-121 (122)
433 3ijr_A Oxidoreductase, short c 21.5 98 0.0034 27.3 4.7 35 14-51 46-80 (291)
434 3obi_A Formyltetrahydrofolate 21.5 4.2E+02 0.014 23.3 9.7 106 12-144 87-197 (288)
435 3f1l_A Uncharacterized oxidore 21.5 1E+02 0.0035 26.4 4.8 34 14-50 11-44 (252)
436 1vhq_A Enhancing lycopene bios 21.5 1.7E+02 0.0058 24.7 6.1 37 14-51 6-47 (232)
437 3o1l_A Formyltetrahydrofolate 21.4 4.3E+02 0.015 23.5 8.8 117 290-433 169-287 (302)
438 3iz6_A 40S ribosomal protein S 21.4 73 0.0025 28.4 3.6 31 114-144 122-154 (305)
439 3l6e_A Oxidoreductase, short-c 21.4 1E+02 0.0035 26.1 4.7 33 15-50 3-35 (235)
440 3rsc_A CALG2; TDP, enediyne, s 21.4 1.8E+02 0.006 26.9 6.8 36 274-311 22-57 (415)
441 3n0v_A Formyltetrahydrofolate 21.4 2.7E+02 0.0093 24.6 7.5 115 292-433 156-272 (286)
442 1cbk_A Protein (7,8-dihydro-6- 21.3 96 0.0033 24.8 4.0 27 275-301 3-29 (160)
443 1kyq_A Met8P, siroheme biosynt 21.2 68 0.0023 28.3 3.4 35 13-52 12-46 (274)
444 3gk3_A Acetoacetyl-COA reducta 21.2 77 0.0026 27.5 3.9 34 14-50 24-57 (269)
445 2vou_A 2,6-dihydroxypyridine h 21.2 75 0.0025 29.5 4.0 34 12-50 3-36 (397)
446 3sc4_A Short chain dehydrogena 21.1 99 0.0034 27.1 4.6 35 14-51 8-42 (285)
447 2rcy_A Pyrroline carboxylate r 21.1 36 0.0012 29.6 1.6 34 12-50 2-39 (262)
448 3kkj_A Amine oxidase, flavin-c 21.1 52 0.0018 27.9 2.8 28 17-49 5-32 (336)
449 3ucx_A Short chain dehydrogena 21.1 1.3E+02 0.0045 25.9 5.4 34 14-50 10-43 (264)
450 1z0s_A Probable inorganic poly 21.1 52 0.0018 29.2 2.6 29 349-379 68-99 (278)
451 4fn4_A Short chain dehydrogena 21.0 1E+02 0.0035 26.8 4.6 34 14-50 6-39 (254)
452 3is3_A 17BETA-hydroxysteroid d 20.9 1.4E+02 0.0047 25.9 5.5 34 14-50 17-50 (270)
453 2ptg_A Enoyl-acyl carrier redu 20.9 1.3E+02 0.0045 26.8 5.6 33 15-49 9-42 (319)
454 3grp_A 3-oxoacyl-(acyl carrier 20.9 1.2E+02 0.0039 26.4 5.0 34 14-50 26-59 (266)
455 2uyy_A N-PAC protein; long-cha 20.9 70 0.0024 28.6 3.7 32 14-50 30-61 (316)
456 3op4_A 3-oxoacyl-[acyl-carrier 20.8 1.2E+02 0.004 25.9 5.0 34 14-50 8-41 (248)
457 2r79_A Periplasmic binding pro 20.8 88 0.003 27.4 4.2 36 101-142 52-89 (283)
458 3e9m_A Oxidoreductase, GFO/IDH 20.8 4.5E+02 0.015 23.4 10.5 110 274-402 7-125 (330)
459 1t1j_A Hypothetical protein; s 20.8 1.2E+02 0.0042 23.0 4.4 33 14-46 7-47 (125)
460 3ox4_A Alcohol dehydrogenase 2 20.8 1.3E+02 0.0044 28.0 5.5 42 264-307 23-64 (383)
461 3m2t_A Probable dehydrogenase; 20.8 3.8E+02 0.013 24.3 8.8 111 274-402 7-126 (359)
462 3enk_A UDP-glucose 4-epimerase 20.8 92 0.0031 27.9 4.5 33 14-50 5-37 (341)
463 3qbc_A 2-amino-4-hydroxy-6-hyd 20.7 1.2E+02 0.004 24.3 4.4 28 274-301 5-32 (161)
464 1oi4_A Hypothetical protein YH 20.7 2.1E+02 0.0072 23.3 6.3 38 14-52 23-60 (193)
465 1imj_A CIB, CCG1-interacting f 20.7 1.6E+02 0.0056 23.5 5.8 37 14-50 31-69 (210)
466 3nyw_A Putative oxidoreductase 20.7 90 0.0031 26.8 4.2 34 14-50 6-39 (250)
467 1x1t_A D(-)-3-hydroxybutyrate 20.7 1.1E+02 0.0037 26.3 4.7 33 15-50 4-36 (260)
468 3ftp_A 3-oxoacyl-[acyl-carrier 20.6 1.5E+02 0.0052 25.6 5.8 34 14-50 27-60 (270)
469 3alj_A 2-methyl-3-hydroxypyrid 20.6 70 0.0024 29.4 3.7 34 12-50 9-42 (379)
470 3pxx_A Carveol dehydrogenase; 20.6 1E+02 0.0036 26.8 4.7 34 14-50 9-42 (287)
471 4fs3_A Enoyl-[acyl-carrier-pro 20.6 97 0.0033 26.7 4.4 36 14-50 5-40 (256)
472 3e18_A Oxidoreductase; dehydro 20.6 4.7E+02 0.016 23.6 9.7 107 274-401 7-122 (359)
473 3l3b_A ES1 family protein; ssg 20.5 1.8E+02 0.006 25.0 6.0 36 15-51 24-64 (242)
474 3gvc_A Oxidoreductase, probabl 20.5 1.3E+02 0.0043 26.3 5.2 34 14-50 28-61 (277)
475 3orf_A Dihydropteridine reduct 20.5 1.1E+02 0.0036 26.3 4.6 34 15-51 22-55 (251)
476 4ehi_A Bifunctional purine bio 20.5 40 0.0014 32.6 1.9 63 4-75 16-80 (534)
477 3dkr_A Esterase D; alpha beta 20.5 84 0.0029 26.0 3.9 35 15-49 22-56 (251)
478 3osu_A 3-oxoacyl-[acyl-carrier 20.5 1.3E+02 0.0044 25.5 5.2 33 15-50 4-36 (246)
479 2wtm_A EST1E; hydrolase; 1.60A 20.4 1.3E+02 0.0046 25.2 5.3 36 15-50 27-64 (251)
480 1pfk_A Phosphofructokinase; tr 20.3 53 0.0018 29.8 2.6 37 346-382 89-128 (320)
481 1vpd_A Tartronate semialdehyde 20.3 1E+02 0.0035 27.2 4.6 31 15-50 6-36 (299)
482 3ruf_A WBGU; rossmann fold, UD 20.3 1.2E+02 0.0041 27.3 5.2 35 13-51 24-58 (351)
483 2qq5_A DHRS1, dehydrogenase/re 20.1 1.2E+02 0.0042 26.0 5.0 33 15-50 5-37 (260)
484 1qyc_A Phenylcoumaran benzylic 20.1 93 0.0032 27.4 4.3 34 14-51 4-37 (308)
485 3rih_A Short chain dehydrogena 20.0 1.2E+02 0.0041 26.8 4.9 35 14-51 40-74 (293)
486 3evn_A Oxidoreductase, GFO/IDH 20.0 4.6E+02 0.016 23.2 9.5 60 340-400 56-123 (329)
487 4g81_D Putative hexonate dehyd 20.0 96 0.0033 26.9 4.2 34 14-50 8-41 (255)
488 1sby_A Alcohol dehydrogenase; 20.0 1.6E+02 0.0053 25.1 5.7 34 13-50 4-38 (254)
489 3icc_A Putative 3-oxoacyl-(acy 20.0 1.4E+02 0.0049 25.3 5.4 34 14-50 6-39 (255)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1e-70 Score=539.07 Aligned_cols=437 Identities=26% Similarity=0.451 Sum_probs=358.2
Q ss_pred ccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCCCCCC-----CCCCCeEEEEcCCCCCCCccCccc
Q 012613 9 RLPRNGKRVILFPLPYQGHINPMLQIASVLYSKG--FSITIIHTNLNPLNA-----CNYPHFEFHSISASLSETEASTED 81 (460)
Q Consensus 9 ~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~V~~~~~~~~~~~~-----~~~~gi~~~~~~~~~~~~~~~~~~ 81 (460)
|...++.||+++|+|++||++|++.||+.|+++| +.|||++++.+.... ...++++|+.+|++++++.+...+
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~ 87 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGN 87 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSC
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCC
Confidence 5556689999999999999999999999999999 999999997433211 112579999999999987655444
Q ss_pred HHHHHHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhc
Q 012613 82 MVAILIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILREK 161 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
....+..+...+...+++.++++.. +.+. ++|+||+|.+++|+..+|+++|||++.|++++++.+..+.+.+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~-~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~ 164 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVA--ETGK-NITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK 164 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHH--HHCC-CCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh--hcCC-CCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence 4444555555556667777776643 2234 799999999999999999999999999999999998887765543322
Q ss_pred CCC-CCCCCcccccccCCCCCCCCCCCCCcC-CCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhhhhcCCCCc
Q 012613 162 CYL-PIQDSQLEARVIECPPLRVKDIPIFET-GDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIHHQYFSIPV 239 (460)
Q Consensus 162 ~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~pv 239 (460)
... +.........+|+++.++.++++.... +....+.+.+.+..+....++.+++||+++||++.++.+ ++.+ +++
T Consensus 165 ~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~-~~~~-~~v 242 (454)
T 3hbf_A 165 TGSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENEL-NSKF-KLL 242 (454)
T ss_dssp CCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH-HTTS-SCE
T ss_pred cCCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHH-HhcC-CCE
Confidence 100 000111122367777888888886543 344456777778888888999999999999999988888 6655 479
Q ss_pred ccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhh
Q 012613 240 FPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEW 319 (460)
Q Consensus 240 ~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 319 (460)
++|||++..... ...+.+.++.+||+.++++++|||||||+...+.+++.+++++|++.++++||+++...
T Consensus 243 ~~vGPl~~~~~~---~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~------ 313 (454)
T 3hbf_A 243 LNVGPFNLTTPQ---RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP------ 313 (454)
T ss_dssp EECCCHHHHSCC---SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH------
T ss_pred EEECCccccccc---ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc------
Confidence 999999975433 12334556999999988899999999999988889999999999999999999998754
Q ss_pred hccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEe
Q 012613 320 LELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLH 399 (460)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~ 399 (460)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+++||+.||+++++.+|+|+.
T Consensus 314 ~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~ 393 (454)
T 3hbf_A 314 KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVG 393 (454)
T ss_dssp HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEE
T ss_pred hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEE
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999984599999
Q ss_pred cCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 400 LDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 400 l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
++. .+++++|+++|+++|++++++.||+||+++++++++|+++|||+.++++++++.+.+
T Consensus 394 l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 394 VDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp CGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred ecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 988 899999999999999986667999999999999999999999999999999998853
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.2e-65 Score=510.60 Aligned_cols=441 Identities=32% Similarity=0.656 Sum_probs=341.4
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC---------CCCeEEEEcCCCCCCCc---cCc
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACN---------YPHFEFHSISASLSETE---AST 79 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~---------~~gi~~~~~~~~~~~~~---~~~ 79 (460)
++++||+++|+|++||++|++.||++|++|||+|||++++.+...... .++++|+.+|+++++.. ...
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 457899999999999999999999999999999999998754321111 13899999998877621 112
Q ss_pred ccHHHHHHHHHHhcchhHHHHHHHhhccCCC-CCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhh
Q 012613 80 EDMVAILIALNAKCVVPFWDCLVKLTSISNV-QEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPIL 158 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~-~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~ 158 (460)
.+...++..+...+...++++++.+.. +. +. +||+||+|.++.|+..+|+++|||++.++++++.......+.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~--~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNH--STNVP-PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHT--CSSSC-CCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhh--hccCC-CceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 344445554446677777788887753 10 24 899999999999999999999999999999998877666555655
Q ss_pred hhcCCCCCCCCc-----ccc----cccCCCCCCCCCCCCCcC--CCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHH
Q 012613 159 REKCYLPIQDSQ-----LEA----RVIECPPLRVKDIPIFET--GDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVEL 227 (460)
Q Consensus 159 ~~~~~~p~~~~~-----~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~ 227 (460)
...++.|..... +.. .+++++.++..+++.... .....+.+.+.+..+....++.+++|++++||++.+
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~ 242 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVI 242 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHH
T ss_pred HhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHH
Confidence 556676654321 111 233444444545443221 112344555556666778899999999999999988
Q ss_pred HHhhhhcCCCCcccccccccC-CCC-------C-CCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHH
Q 012613 228 TTIHHQYFSIPVFPIGPFHKY-FPA-------S-SSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGL 298 (460)
Q Consensus 228 ~~~~~~~~~~pv~~vGpl~~~-~~~-------~-~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al 298 (460)
+.+ ++.+ +++++|||++.. +.. . ....++.+.++.+|+++++++++|||||||+...+.+++..++++|
T Consensus 243 ~~~-~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 320 (482)
T 2pq6_A 243 NAL-SSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGL 320 (482)
T ss_dssp HHH-HTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHH
T ss_pred HHH-HHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHH
Confidence 888 7766 679999999863 111 0 0011244556899999887889999999999877888899999999
Q ss_pred hhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecc
Q 012613 299 ANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQP 378 (460)
Q Consensus 299 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P 378 (460)
++.+.+++|+++.....+. ...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|
T Consensus 321 ~~~~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P 398 (482)
T 2pq6_A 321 ANCKKSFLWIIRPDLVIGG--SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWP 398 (482)
T ss_dssp HHTTCEEEEECCGGGSTTT--GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HhcCCcEEEEEcCCccccc--cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecC
Confidence 9999999999985421110 12378899888899999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHhh-hhheeeEecCCccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHH
Q 012613 379 YLGDQMVNARYIS-HVWRLGLHLDGNVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHI 457 (460)
Q Consensus 379 ~~~DQ~~na~~v~-~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (460)
+.+||+.||++++ + +|+|+.++..+++++|.++|+++|+|++++.||+||+++++++++|+.+|||+.++++++++.+
T Consensus 399 ~~~dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 477 (482)
T 2pq6_A 399 FFADQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 477 (482)
T ss_dssp CSTTHHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 9999999999997 7 6999999877999999999999999954558999999999999999999999999999999998
Q ss_pred hcC
Q 012613 458 LSF 460 (460)
Q Consensus 458 ~~~ 460 (460)
.++
T Consensus 478 ~~~ 480 (482)
T 2pq6_A 478 LLK 480 (482)
T ss_dssp TCC
T ss_pred Hhc
Confidence 653
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=4.7e-62 Score=485.96 Aligned_cols=439 Identities=27% Similarity=0.424 Sum_probs=325.7
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCCC--CCCC----C-CCCeEEEEcCCCCCCCccCcccHH
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSK-GFSITIIHTNLNP--LNAC----N-YPHFEFHSISASLSETEASTEDMV 83 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~V~~~~~~~~~--~~~~----~-~~gi~~~~~~~~~~~~~~~~~~~~ 83 (460)
.+++||+++|+|++||++|++.||++|++| ||+|||++++.+. .... . ..+++|+.+|.+..++.....+..
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 83 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTRIE 83 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTCCHH
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCchhHH
Confidence 456899999999999999999999999998 9999999997531 1111 0 258999999965322211122333
Q ss_pred HHHHHHHHhcchhHHHHHHHhhccCCCCCCCe-eEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcC
Q 012613 84 AILIALNAKCVVPFWDCLVKLTSISNVQEDSF-ACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKC 162 (460)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~p-Dlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (460)
..+..........+.++++.+.. .. ++ |+||+|.++.|+..+|+++|||++.+++++........+.+......
T Consensus 84 ~~~~~~~~~~~~~l~~ll~~~~~----~~-~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (480)
T 2vch_A 84 SRISLTVTRSNPELRKVFDSFVE----GG-RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETV 158 (480)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHH----TT-CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhhHHHHHHHHHhcc----CC-CCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcC
Confidence 33333445555667777776632 13 67 99999999999999999999999999999988776655444322211
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhhhhcC--CCCcc
Q 012613 163 YLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIHHQYF--SIPVF 240 (460)
Q Consensus 163 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~--~~pv~ 240 (460)
..+.........+++++.+...+++.....+.....+.+......+..+..+++|++.+||+.....+ .... .++++
T Consensus 159 ~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l-~~~~~~~~~v~ 237 (480)
T 2vch_A 159 SCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKAL-QEPGLDKPPVY 237 (480)
T ss_dssp CSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHH-HSCCTTCCCEE
T ss_pred CCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHH-HhcccCCCcEE
Confidence 11111000011234444444444443222222234444445555666778889999999999876666 4311 14699
Q ss_pred cccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccc----
Q 012613 241 PIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVRE---- 316 (460)
Q Consensus 241 ~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~---- 316 (460)
+|||++..... ....+.+.++.+|+++++++++|||||||+...+.+++..++++|+++++++||+++.....+
T Consensus 238 ~vGpl~~~~~~--~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~ 315 (480)
T 2vch_A 238 PVGPLVNIGKQ--EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSY 315 (480)
T ss_dssp ECCCCCCCSCS--CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTT
T ss_pred EEecccccccc--ccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccc
Confidence 99999865321 000223456899999987889999999999888889999999999999999999998653211
Q ss_pred ------hhhhccCchhHHHhhcCCceeee-ccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHH
Q 012613 317 ------AEWLELLPTGFVEMLDGRGHIVK-WAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARY 389 (460)
Q Consensus 317 ------~~~~~~l~~~~~~~~~~~~~~~~-~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~ 389 (460)
.+....+|++|.++..++++++. |+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||++
T Consensus 316 ~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~ 395 (480)
T 2vch_A 316 FDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVL 395 (480)
T ss_dssp TCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred cccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHH
Confidence 01113589999998888888776 99999999999999999999999999999999999999999999999999
Q ss_pred h-hhhheeeEecCC----ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 390 I-SHVWRLGLHLDG----NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 390 v-~~~~G~G~~l~~----~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
+ ++ +|+|+.++. .++++.|+++|+++|++++++.||+||+++++++++|+.++|++.++++++++.+++
T Consensus 396 l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 396 LSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 7 68 799999975 589999999999999955458999999999999999999999999999999998863
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.6e-62 Score=484.73 Aligned_cols=433 Identities=25% Similarity=0.464 Sum_probs=328.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeE--EEEeCCCCCCC-----CC-CCCCeEEEEcCCCCCCCccCcccHHH
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSI--TIIHTNLNPLN-----AC-NYPHFEFHSISASLSETEASTEDMVA 84 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V--~~~~~~~~~~~-----~~-~~~gi~~~~~~~~~~~~~~~~~~~~~ 84 (460)
+++||+++|+|++||++|++.||++|++|||+| |+++++.+... .. ...+++++.++++++++.........
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~~ 85 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQE 85 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTH
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChHH
Confidence 368999999999999999999999999997665 67777532110 00 12589999999888876432223333
Q ss_pred HHHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhc-CC
Q 012613 85 ILIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILREK-CY 163 (460)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~-~~ 163 (460)
.+..+...+...+.++++.+.+ +.+. +||+||+|.++.|+..+|+++|||++.+++++++......+.+..... .+
T Consensus 86 ~~~~~~~~~~~~~~~~l~~l~~--~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T 2c1x_A 86 DIELFTRAAPESFRQGMVMAVA--ETGR-PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGV 162 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHTC-CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCS
T ss_pred HHHHHHHHhHHHHHHHHHHHHh--ccCC-CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCC
Confidence 3334444444456566665542 1124 899999999999999999999999999999988776655433322111 11
Q ss_pred CCC-C-CCcccccccCCCCCCCCCCCCCcC--CCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhhhhcCCCCc
Q 012613 164 LPI-Q-DSQLEARVIECPPLRVKDIPIFET--GDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIHHQYFSIPV 239 (460)
Q Consensus 164 ~p~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~pv 239 (460)
.+. . .......++++..++.++++.... .....+.+.+.+..+....++.+++|++++||++.++.+ ++.+ +++
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~-~~~~-~~~ 240 (456)
T 2c1x_A 163 SGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDL-KSKL-KTY 240 (456)
T ss_dssp SCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH-HHHS-SCE
T ss_pred cccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHH-HhcC-CCE
Confidence 110 0 011112345555555555553221 112234445555556667889999999999999887777 6655 479
Q ss_pred ccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhh
Q 012613 240 FPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEW 319 (460)
Q Consensus 240 ~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 319 (460)
++|||++..... ..++.+.++.+|++.++++++|||||||+.....+++..+++++++.+.+++|+++...
T Consensus 241 ~~vGpl~~~~~~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~------ 311 (456)
T 2c1x_A 241 LNIGPFNLITPP---PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA------ 311 (456)
T ss_dssp EECCCHHHHC------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG------
T ss_pred EEecCcccCccc---ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc------
Confidence 999999875432 11344456899999877889999999999987788899999999999999999998643
Q ss_pred hccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEe
Q 012613 320 LELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLH 399 (460)
Q Consensus 320 ~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~ 399 (460)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||+++++.+|+|+.
T Consensus 312 ~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~ 391 (456)
T 2c1x_A 312 RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVR 391 (456)
T ss_dssp GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEE
T ss_pred hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEE
Confidence 23488888888889999999999999999999999999999999999999999999999999999999999993399999
Q ss_pred cCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 400 LDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 400 l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
++. .++++.|+++|+++|+|++++.||+||+++++.+++|+.+|||+.++++++++.+.+
T Consensus 392 l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 392 IEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp CGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred ecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 987 899999999999999985556999999999999999999999999999999998854
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4e-59 Score=463.15 Aligned_cols=425 Identities=26% Similarity=0.429 Sum_probs=322.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---------CCCCCCeEEEEcCCC-CCCCccCcc
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSK--GFSITIIHTNLNPLN---------ACNYPHFEFHSISAS-LSETEASTE 80 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~---------~~~~~gi~~~~~~~~-~~~~~~~~~ 80 (460)
+++||+++|+|++||++|++.||++|++| ||+|||++++.+... .....+++|+.+|++ +++ .....
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~-~~~~~ 86 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPP-QELLK 86 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCC-GGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCc-ccccC
Confidence 46899999999999999999999999999 999999999865311 011258999999976 332 11111
Q ss_pred cHHHHHHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhh
Q 012613 81 DMVAILIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILRE 160 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 160 (460)
.....+......+...++++++.+.. . +||+||+|.++.|+..+|+++|||++.+++++.+......+.+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~~~~~-----~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 160 (463)
T 2acv_A 87 SPEFYILTFLESLIPHVKATIKTILS-----N-KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQI 160 (463)
T ss_dssp SHHHHHHHHHHHTHHHHHHHHHHHCC-----T-TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCT
T ss_pred CccHHHHHHHHhhhHHHHHHHHhccC-----C-CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcc
Confidence 11111323334555566667766522 3 89999999999999999999999999999999887776655443221
Q ss_pred cCCCCCCCCcc---cccccCC-CCCCCCCCCCCcCCCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhhhhcC-
Q 012613 161 KCYLPIQDSQL---EARVIEC-PPLRVKDIPIFETGDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIHHQYF- 235 (460)
Q Consensus 161 ~~~~p~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~- 235 (460)
. .+...... ...++++ +.+...+++.....+ ......+.........++.+++|++.+||+.....+ ....
T Consensus 161 ~--~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l-~~~~~ 236 (463)
T 2acv_A 161 E--EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDAL-YDHDE 236 (463)
T ss_dssp T--CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHH-HHHCT
T ss_pred c--CCCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHH-Hhccc
Confidence 0 11111111 1234444 444444443211122 224445555555667788899999999999876666 4433
Q ss_pred -CCCcccccccccCCC-CCCCCcccccccchhhhccCCCCeEEEEEccCcc-cCCHHHHHHHHHHHhhCCCceEEEEcCC
Q 012613 236 -SIPVFPIGPFHKYFP-ASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVV-NIDETEFLEIAWGLANSRVPFLWVVRPG 312 (460)
Q Consensus 236 -~~pv~~vGpl~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (460)
.+++++|||++.... ......++.+.++.+|++.++++++|||||||+. ..+.+++..++++|++.+.++||+++.+
T Consensus 237 p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 316 (463)
T 2acv_A 237 KIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE 316 (463)
T ss_dssp TSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC
T ss_pred cCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 356999999986542 1000001234568999998878899999999999 7778889999999999999999999863
Q ss_pred cccchhhhccCchhHHHhh--cCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHh
Q 012613 313 LVREAEWLELLPTGFVEML--DGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYI 390 (460)
Q Consensus 313 ~~~~~~~~~~l~~~~~~~~--~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v 390 (460)
. ..+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+++||+.||+++
T Consensus 317 ~-------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~l 389 (463)
T 2acv_A 317 K-------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRL 389 (463)
T ss_dssp G-------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH
T ss_pred c-------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHH
Confidence 1 23778887777 78999999999999999999999999999999999999999999999999999999995
Q ss_pred -hhhheeeEec-C----C--ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHh
Q 012613 391 -SHVWRLGLHL-D----G--NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHIL 458 (460)
Q Consensus 391 -~~~~G~G~~l-~----~--~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
++ +|+|+.+ + . .++++.|.++|+++|++. +.||+||+++++.+++|+.++|++.++++++++.+.
T Consensus 390 v~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 390 VKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 78 7999999 3 3 489999999999999621 589999999999999999999999999999999875
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6.3e-46 Score=366.78 Aligned_cols=397 Identities=17% Similarity=0.177 Sum_probs=271.9
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccC----cccHHHHHH
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEAS----TEDMVAILI 87 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~----~~~~~~~~~ 87 (460)
|..|||+|+++++.||++|+++||++|+++||+|+|++++........ .|++|++++..++..... ..+....+.
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-AGATPVVYDSILPKESNPEESWPEDQESAMG 88 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCEEEECCCCSCCTTCTTCCCCSSHHHHHH
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEecCccccccccchhhcchhHHHHHH
Confidence 446899999999999999999999999999999999999754332222 488999998765543211 223333333
Q ss_pred HHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcCCCCCC
Q 012613 88 ALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKCYLPIQ 167 (460)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (460)
.+.......+.++.+.+.+ . +||+||+|.+..++..+|+.+|||++.+++.+..........+... ..+....
T Consensus 89 ~~~~~~~~~~~~l~~~l~~-----~-~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 161 (424)
T 2iya_A 89 LFLDEAVRVLPQLEDAYAD-----D-RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQ-DPTADRG 161 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTT-----S-CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGS-CCCC---
T ss_pred HHHHHHHHHHHHHHHHHhc-----c-CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccc-ccccccc
Confidence 3333333333344444433 4 8999999998888999999999999999876541111000000000 0000000
Q ss_pred CCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHh----------hhccccEEEEcCchhccHHHHHHhhhhcCCC
Q 012613 168 DSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVS----------LIKASSGIIWNSYRELEQVELTTIHHQYFSI 237 (460)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~ 237 (460)
. ....+...... ..+.... .....+.+.+..... .....+.++++++++++++ ..+++.
T Consensus 162 ~---~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~------~~~~~~ 230 (424)
T 2iya_A 162 E---EAAAPAGTGDA-EEGAEAE-DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK------GDTVGD 230 (424)
T ss_dssp ----------------------H-HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT------GGGCCT
T ss_pred c---ccccccccccc-hhhhccc-hhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC------ccCCCC
Confidence 0 00000000000 0000000 000000011111111 1124677899999999876 455666
Q ss_pred CcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccch
Q 012613 238 PVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREA 317 (460)
Q Consensus 238 pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 317 (460)
++++|||+..... . ..+|++..+++++|||++||......+.+..+++++++.+.+++|.++.....
T Consensus 231 ~~~~vGp~~~~~~-----~------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~-- 297 (424)
T 2iya_A 231 NYTFVGPTYGDRS-----H------QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP-- 297 (424)
T ss_dssp TEEECCCCCCCCG-----G------GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--
T ss_pred CEEEeCCCCCCcc-----c------CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCCh--
Confidence 7999999764211 0 23576655678999999999986567788889999998888998988754310
Q ss_pred hhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheee
Q 012613 318 EWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLG 397 (460)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G 397 (460)
+....+ ++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ +|+|
T Consensus 298 ~~~~~~--------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g 366 (424)
T 2iya_A 298 ADLGEV--------PPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLG 366 (424)
T ss_dssp GGGCSC--------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSE
T ss_pred HHhccC--------CCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCCE
Confidence 101123 345599999999999999998 99999999999999999999999999999999999999 6999
Q ss_pred EecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHh
Q 012613 398 LHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHIL 458 (460)
Q Consensus 398 ~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
+.+.. ++++++|.++|+++|+| +.|++++++++++++ ..++..++++.+++.++
T Consensus 367 ~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 367 RHIPRDQVTAEKLREAVLAVASD---PGVAERLAAVRQEIR----EAGGARAAADILEGILA 421 (424)
T ss_dssp EECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred EEcCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHHh
Confidence 99987 89999999999999999 899999999999998 67888888888887765
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=4.9e-46 Score=364.82 Aligned_cols=355 Identities=16% Similarity=0.192 Sum_probs=234.9
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCc-------c-------C
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETE-------A-------S 78 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~-------~-------~ 78 (460)
+.|||+|+++|+.||++|+++||++|++|||+|||++++....... .++.+..+..+..... . .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE--AGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSE 98 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT--TTCEEEESSTTCCSHHHHSCCC----------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh--cCCeeEecCCchhHhhhccccccccccccchh
Confidence 3599999999999999999999999999999999999874433222 5788888764332111 0 0
Q ss_pred cccHHHHHHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhh
Q 012613 79 TEDMVAILIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPIL 158 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~ 158 (460)
..........+.......+.++++.+.. . +||+||+|.+++++..+|+.+|||++.+...+.........
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~-~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~---- 168 (400)
T 4amg_A 99 GLGEGFFAEMFARVSAVAVDGALRTARS-----W-RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA---- 168 (400)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHH-----H-CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH----
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHh-----c-CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh----
Confidence 0011111222222333333444444544 4 89999999999999999999999999876553321111000
Q ss_pred hhcCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhh-----hccccEEEEcCchhccHHHHHHhhhh
Q 012613 159 REKCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSL-----IKASSGIIWNSYRELEQVELTTIHHQ 233 (460)
Q Consensus 159 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~le~~~~~~~~~~ 233 (460)
...+.+...... .......+....+..... . ..
T Consensus 169 -------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~ 206 (400)
T 4amg_A 169 -------------------------------------LIRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL----L-PE 206 (400)
T ss_dssp -------------------------------------HHHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT----S-CG
T ss_pred -------------------------------------HHHHHHHHHHHHhCCCcccccchhhcccCchhhcc----C-cc
Confidence 000000000000 011111222222111110 0 00
Q ss_pred cCCCC-cccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCC--HHHHHHHHHHHhhCCCceEEEEc
Q 012613 234 YFSIP-VFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNID--ETEFLEIAWGLANSRVPFLWVVR 310 (460)
Q Consensus 234 ~~~~p-v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~--~~~~~~~~~al~~~~~~~i~~~~ 310 (460)
....+ ...+.+... .....+.+|++..+++++|||||||+.... ...+..+++++++.+.+++|..+
T Consensus 207 ~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~ 276 (400)
T 4amg_A 207 DRRSPGAWPMRYVPY----------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLG 276 (400)
T ss_dssp GGCCTTCEECCCCCC----------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECC
T ss_pred cccCCcccCcccccc----------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEec
Confidence 00011 222221111 112224578888888999999999987633 35678899999999999999987
Q ss_pred CCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHh
Q 012613 311 PGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYI 390 (460)
Q Consensus 311 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v 390 (460)
+...+. ...+|+++ ++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++||+.||+++
T Consensus 277 ~~~~~~---~~~~~~~v--------~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v 343 (400)
T 4amg_A 277 GGDLAL---LGELPANV--------RVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL 343 (400)
T ss_dssp TTCCCC---CCCCCTTE--------EEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH
T ss_pred Cccccc---cccCCCCE--------EEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH
Confidence 654221 23455555 99999999999999988 999999999999999999999999999999999999
Q ss_pred hhhheeeEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHH
Q 012613 391 SHVWRLGLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDH 456 (460)
Q Consensus 391 ~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (460)
++ +|+|+.++. ++++ ++|+++|+| +.||++|++++++++ +..+..++++.+++.
T Consensus 344 ~~-~G~g~~l~~~~~~~----~al~~lL~d---~~~r~~a~~l~~~~~----~~~~~~~~a~~le~l 398 (400)
T 4amg_A 344 TG-LGIGFDAEAGSLGA----EQCRRLLDD---AGLREAALRVRQEMS----EMPPPAETAAXLVAL 398 (400)
T ss_dssp HH-HTSEEECCTTTCSH----HHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHH
T ss_pred HH-CCCEEEcCCCCchH----HHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHHh
Confidence 99 699999988 7776 567789999 899999999999999 556777777776653
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.4e-44 Score=350.74 Aligned_cols=378 Identities=13% Similarity=0.070 Sum_probs=254.3
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccC-cccHHHHHHHHHHhc
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEAS-TEDMVAILIALNAKC 93 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 93 (460)
|||+|++.++.||++|+++||++|++|||+|+|++++........ .|++++.++....+.... .......+ ...+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-VGVPHVPVGPSARAPIQRAKPLTAEDV---RRFT 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCCEEECCC-------CCSCCCHHHH---HHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-cCCeeeeCCCCHHHHhhcccccchHHH---HHHH
Confidence 799999999999999999999999999999999999753222222 589999998653221110 11111111 1122
Q ss_pred chhHHHHHHHhhccCCCCCCCeeEEEECC-cchh--HHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcCCCCCCCCc
Q 012613 94 VVPFWDCLVKLTSISNVQEDSFACIITDP-LWYF--VHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKCYLPIQDSQ 170 (460)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~~pDlvi~D~-~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 170 (460)
...+.+.++++.. . .. +||+||+|. +..+ +..+|+.+|||++.+++++... ...+.|.....
T Consensus 77 ~~~~~~~~~~l~~--~-~~-~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~-----------~~~~~p~~~~~ 141 (415)
T 1iir_A 77 TEAIATQFDEIPA--A-AE-GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV-----------PSPYYPPPPLG 141 (415)
T ss_dssp HHHHHHHHHHHHH--H-TT-TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSSSCCCC--
T ss_pred HHHHHHHHHHHHH--H-hc-CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC-----------CCcccCCccCC
Confidence 2223344555442 0 14 899999997 6677 8899999999999998765321 11122221110
Q ss_pred ccccccCCCCCCCCC-CCCC-cCCC-CCcHHHHHHHHHh------------hhccccEEEEcCchhccH-HHHHHhhhhc
Q 012613 171 LEARVIECPPLRVKD-IPIF-ETGD-PKNVDKVISAMVS------------LIKASSGIIWNSYRELEQ-VELTTIHHQY 234 (460)
Q Consensus 171 ~~~~~~~~~~~~~~~-~~~~-~~~~-~~~~~~~~~~~~~------------~~~~~~~~l~~~~~~le~-~~~~~~~~~~ 234 (460)
. .++. . +..+ +... .... ...+...+..... ..... ..++|++++|++ + +.+
T Consensus 142 ~--~~~~--~-~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~------~~~ 209 (415)
T 1iir_A 142 E--PSTQ--D-TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ------PTD 209 (415)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC------CCS
T ss_pred c--cccc--h-HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC------ccc
Confidence 0 0000 0 0000 0000 0000 0000000011110 11122 579999999986 4 333
Q ss_pred CCCCcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcc
Q 012613 235 FSIPVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLV 314 (460)
Q Consensus 235 ~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 314 (460)
+ ++++|||+..+.. .+.+.++.+|++. ++++|||++||+. ...+....+++++++.+.+++|+++....
T Consensus 210 ~--~~~~vG~~~~~~~------~~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~ 278 (415)
T 1iir_A 210 L--DAVQTGAWILPDE------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADL 278 (415)
T ss_dssp S--CCEECCCCCCCCC------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTC
T ss_pred C--CeEeeCCCccCcc------cCCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 3 7999999986532 2233458899976 3589999999997 56777888999999999999999876531
Q ss_pred cchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhh
Q 012613 315 REAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVW 394 (460)
Q Consensus 315 ~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~ 394 (460)
. ...+++ |+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ .
T Consensus 279 ~----~~~~~~--------~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~ 343 (415)
T 1iir_A 279 V----LPDDGA--------DCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-L 343 (415)
T ss_dssp C----CSSCGG--------GEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-H
T ss_pred c----ccCCCC--------CEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH-C
Confidence 1 112344 4489999999999988887 99999999999999999999999999999999999999 6
Q ss_pred eeeEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHH
Q 012613 395 RLGLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHI 457 (460)
Q Consensus 395 G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (460)
|+|+.++. +++++.|.++|+++ +| +.|++++++++++++ ...+.+++++.+.+.+
T Consensus 344 g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 344 GVGVAHDGPIPTFDSLSAALATA-LT---PETHARATAVAGTIR----TDGAAVAARLLLDAVS 399 (415)
T ss_dssp TSEEECSSSSCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC----SCHHHHHHHHHHHHHH
T ss_pred CCcccCCcCCCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh----hcChHHHHHHHHHHHH
Confidence 99999987 88999999999999 88 899999999999987 5666777777666654
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.2e-43 Score=344.92 Aligned_cols=375 Identities=13% Similarity=0.038 Sum_probs=255.3
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCcc--CcccHHHHHHHHHHh
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEA--STEDMVAILIALNAK 92 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 92 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++........ .|++++.++........ ........+..+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 76 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-VGVPHVPVGLPQHMMLQEGMPPPPPEEEQRL--- 76 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCCEEECSCCGGGCCCTTSCCCCHHHHHHH---
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cCCeeeecCCCHHHHHhhccccchhHHHHHH---
Confidence 799999999999999999999999999999999998743222222 58899998854321111 011111111111
Q ss_pred cchhHHHHHHHhhccCCCCCCCeeEEEECC-cchh--HHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcCCCCCCCC
Q 012613 93 CVVPFWDCLVKLTSISNVQEDSFACIITDP-LWYF--VHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKCYLPIQDS 169 (460)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~-~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 169 (460)
....+.+.++.+.. . .. +||+||+|. ..++ +..+|+.+|||++.+.+++... ...+.| +..
T Consensus 77 ~~~~~~~~~~~l~~--~-~~-~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~-----------~~~~~p-~~~ 140 (416)
T 1rrv_A 77 AAMTVEMQFDAVPG--A-AE-GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL-----------ASPHLP-PAY 140 (416)
T ss_dssp HHHHHHHHHHHHHH--H-TT-TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSSSC-CCB
T ss_pred HHHHHHHHHHHHHH--H-hc-CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC-----------CCcccC-CCC
Confidence 11223344455441 0 14 899999996 4566 7889999999999988764321 111122 000
Q ss_pred cccccccCCCCCCCCCCCCCcCCCCC-c----HHHHHHHHH------------hhhccccEEEEcCchhccHHHHHHhhh
Q 012613 170 QLEARVIECPPLRVKDIPIFETGDPK-N----VDKVISAMV------------SLIKASSGIIWNSYRELEQVELTTIHH 232 (460)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~------------~~~~~~~~~l~~~~~~le~~~~~~~~~ 232 (460)
. ++.... +..+.. ...... . +........ +..... .++++++++|+++ .
T Consensus 141 ~----~~~~~~-r~~n~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~------~ 206 (416)
T 1rrv_A 141 D----EPTTPG-VTDIRV--LWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL------Q 206 (416)
T ss_dssp C----SCCCTT-CCCHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC------C
T ss_pred C----CCCCch-HHHHHH--HHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC------C
Confidence 0 000000 000000 000000 0 000011111 111223 6899999999865 3
Q ss_pred hcCCCCcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCccc-CCHHHHHHHHHHHhhCCCceEEEEcC
Q 012613 233 QYFSIPVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVN-IDETEFLEIAWGLANSRVPFLWVVRP 311 (460)
Q Consensus 233 ~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (460)
+++ ++++|||+..+.. .+.+.++.+|++.. +++|||++||... ...+.+..+++++++.+.+++|+++.
T Consensus 207 ~~~--~~~~vG~~~~~~~------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~ 276 (416)
T 1rrv_A 207 PDV--DAVQTGAWLLSDE------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGW 276 (416)
T ss_dssp SSC--CCEECCCCCCCCC------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCC--CeeeECCCccCcc------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 332 7999999987532 22334588999763 5899999999864 34567788999999999999999876
Q ss_pred CcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhh
Q 012613 312 GLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYIS 391 (460)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~ 391 (460)
...+ ...+ ++|+.+++|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||++++
T Consensus 277 ~~~~----~~~~--------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 342 (416)
T 1rrv_A 277 TELV----LPDD--------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVA 342 (416)
T ss_dssp TTCC----CSCC--------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHH
T ss_pred cccc----ccCC--------CCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHH
Confidence 5311 0123 345599999999999988888 9999999999999999999999999999999999999
Q ss_pred hhheeeEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHH-HHHH
Q 012613 392 HVWRLGLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERL-IDHI 457 (460)
Q Consensus 392 ~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 457 (460)
+ .|+|+.++. +++++.|.++|+++ +| +.|++++++++++++ ..++. ++++.+ ++.+
T Consensus 343 ~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 343 A-LGIGVAHDGPTPTFESLSAALTTV-LA---PETRARAEAVAGMVL----TDGAA-AAADLVLAAVG 400 (416)
T ss_dssp H-HTSEEECSSSCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCC----CCHHH-HHHHHHHHHHH
T ss_pred H-CCCccCCCCCCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHh----hcCcH-HHHHHHHHHHh
Confidence 9 699999987 89999999999999 98 899999999998887 56666 777776 4443
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1e-41 Score=335.76 Aligned_cols=377 Identities=15% Similarity=0.146 Sum_probs=266.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCcc----CcccHHHHHHH-
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEA----STEDMVAILIA- 88 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~----~~~~~~~~~~~- 88 (460)
.|||+|++.++.||++|+++||++|+++||+|++++++........ .|+.+..++..++.... ........+..
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-AGATVVPYQSEIIDADAAEVFGSDDLGVRPHLM 98 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCEEEECCCSTTTCCHHHHHHSSSSCHHHHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-cCCEEEeccccccccccchhhccccHHHHHHHH
Confidence 5899999999999999999999999999999999998643333222 58999999865543211 00011111222
Q ss_pred HHHhcchhHHHHHHHhhccCCCCCCCeeEEEEC-CcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcCCCCCC
Q 012613 89 LNAKCVVPFWDCLVKLTSISNVQEDSFACIITD-PLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKCYLPIQ 167 (460)
Q Consensus 89 ~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D-~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (460)
+.......+.++.+.+.+ . +||+||+| ....++..+|+.+|||++.+.+.......... .+...+......
T Consensus 99 ~~~~~~~~~~~l~~~l~~-----~-~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~~~~- 170 (415)
T 3rsc_A 99 YLRENVSVLRATAEALDG-----D-VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMVTLAGTID- 170 (415)
T ss_dssp HHHHHHHHHHHHHHHHSS-----S-CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHHHHHTCCC-
T ss_pred HHHHHHHHHHHHHHHHhc-----c-CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-ccccccccccCC-
Confidence 233333334445555544 5 89999999 77788899999999999998754321000000 000000000000
Q ss_pred CCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHH----------hhhcc-ccEEEEcCchhccHHHHHHhhhhcCC
Q 012613 168 DSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMV----------SLIKA-SSGIIWNSYRELEQVELTTIHHQYFS 236 (460)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~l~~~~~~le~~~~~~~~~~~~~ 236 (460)
+ .....+.+.+.... ..... .+..+....+.++++ ...++
T Consensus 171 --------p---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~ 221 (415)
T 3rsc_A 171 --------P---------------LDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA------GDTFD 221 (415)
T ss_dssp --------G---------------GGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT------GGGCC
T ss_pred --------h---------------hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC------cccCC
Confidence 0 00000111111111 11111 266777788877765 55566
Q ss_pred CCcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccc
Q 012613 237 IPVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVRE 316 (460)
Q Consensus 237 ~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 316 (460)
.++.++||+...... ..+|....+++++||+++||......+.+..+++++++.+.+++|.++.+.. .
T Consensus 222 ~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~-~ 289 (415)
T 3rsc_A 222 DRFVFVGPCFDDRRF-----------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVD-P 289 (415)
T ss_dssp TTEEECCCCCCCCGG-----------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSC-G
T ss_pred CceEEeCCCCCCccc-----------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCC-h
Confidence 679999987653211 2345544457899999999998766778888999999888888888875421 0
Q ss_pred hhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhhee
Q 012613 317 AEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRL 396 (460)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 396 (460)
+....++ +|+.+.+|+|+.++|+++|+ +|||||.||++||+++|+|+|++|...||+.||+++++ .|+
T Consensus 290 -~~l~~~~--------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~g~ 357 (415)
T 3rsc_A 290 -AALGDLP--------PNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-LGL 357 (415)
T ss_dssp -GGGCCCC--------TTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-HTC
T ss_pred -HHhcCCC--------CcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-cCC
Confidence 1122334 45599999999999999998 99999999999999999999999999999999999999 599
Q ss_pred eEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 397 GLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 397 G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
|+.+.. +++++.|.++|+++|+| +.++++++++++++. +.++.+++++.+.+.+.+
T Consensus 358 g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 358 GAVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVR----RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHH
T ss_pred EEEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhc
Confidence 999988 89999999999999999 899999999999998 678899999998888764
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=4.5e-41 Score=329.72 Aligned_cols=376 Identities=19% Similarity=0.198 Sum_probs=265.1
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCc----cCcccHHHHHHH-H
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETE----ASTEDMVAILIA-L 89 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~----~~~~~~~~~~~~-~ 89 (460)
+||+|++.++.||++|++.||++|+++||+|++++++........ .|+.+..++..++... ....+....+.. +
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-AGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVY 83 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-TTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-cCCEEEecccccccccccccccccchHHHHHHHH
Confidence 599999999999999999999999999999999998633322222 5899999885433211 122233333333 3
Q ss_pred HHhcchhHHHHHHHhhccCCCCCCCeeEEEEC-CcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcCCCCCCC
Q 012613 90 NAKCVVPFWDCLVKLTSISNVQEDSFACIITD-PLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKCYLPIQD 168 (460)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D-~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 168 (460)
.......+.++.+.+.+ . +||+||+| ....++..+|+.+|||++.+.+.......... .+...+......+
T Consensus 84 ~~~~~~~~~~l~~~l~~-----~-~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~- 155 (402)
T 3ia7_A 84 VRENVAILRAAEEALGD-----N-PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKSNGQRHP- 155 (402)
T ss_dssp HHHHHHHHHHHHHHHTT-----C-CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHHHTCCCG-
T ss_pred HHHHHHHHHHHHHHHhc-----c-CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-cccccccccccCh-
Confidence 33334444455555554 5 89999999 77788899999999999998754321000000 0000000000000
Q ss_pred CcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHH----------hhhccc-cEEEEcCchhccHHHHHHhhhhcCCC
Q 012613 169 SQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMV----------SLIKAS-SGIIWNSYRELEQVELTTIHHQYFSI 237 (460)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~l~~~~~~le~~~~~~~~~~~~~~ 237 (460)
.....+...+.... ...... +..+....+++++. ...++.
T Consensus 156 -----------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~ 206 (402)
T 3ia7_A 156 -----------------------ADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF------AETFDE 206 (402)
T ss_dssp -----------------------GGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT------GGGCCT
T ss_pred -----------------------hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc------cccCCC
Confidence 00000111111111 111112 56677777777765 555566
Q ss_pred CcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccch
Q 012613 238 PVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREA 317 (460)
Q Consensus 238 pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 317 (460)
++.++||....... ...|....+++++||+++||......+.+..+++++++.+.++++.++.+.. .
T Consensus 207 ~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~- 273 (402)
T 3ia7_A 207 RFAFVGPTLTGRDG-----------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLD-P- 273 (402)
T ss_dssp TEEECCCCCCC---------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSC-G-
T ss_pred CeEEeCCCCCCccc-----------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCC-h-
Confidence 79999987654221 2345544457799999999998766678888999999888888888875421 0
Q ss_pred hhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeeccc-ccchhhhHHHhhhhhee
Q 012613 318 EWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPY-LGDQMVNARYISHVWRL 396 (460)
Q Consensus 318 ~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~-~~DQ~~na~~v~~~~G~ 396 (460)
+....++ +|+.+.+|+|+.++|+++|+ +|||||.||++||+++|+|+|++|. ..||+.||+++++ .|+
T Consensus 274 ~~~~~~~--------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~ 342 (402)
T 3ia7_A 274 AVLGPLP--------PNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGL 342 (402)
T ss_dssp GGGCSCC--------TTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTS
T ss_pred hhhCCCC--------CcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCC
Confidence 1122233 45599999999999999998 9999999999999999999999999 9999999999999 599
Q ss_pred eEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 397 GLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 397 G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
|+.+.. +++++.|.++|.++|+| +.++++++++++++. +.++.+++++.+.+.+++
T Consensus 343 g~~~~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 343 GSVLRPDQLEPASIREAVERLAAD---SAVRERVRRMQRDIL----SSGGPARAADEVEAYLGR 399 (402)
T ss_dssp EEECCGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHHH
T ss_pred EEEccCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHh----hCChHHHHHHHHHHHHhh
Confidence 999988 88999999999999999 899999999999998 778899999988887753
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.5e-41 Score=332.72 Aligned_cols=376 Identities=13% Similarity=0.059 Sum_probs=249.4
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCc-cCcccHHHHHHHHHHhc
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETE-ASTEDMVAILIALNAKC 93 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 93 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++........ .|+.|..++....... ........+...+....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE-VGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVV 79 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-TTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cCCceeecCCCHHHHhccccCCHHHHHHHHHHHH
Confidence 799999999999999999999999999999999998643222222 5889999885432110 00000000111111111
Q ss_pred chhHHHHHHHhhccCCCCCCCeeEEEECCcchhH---HHHHHHcCCCeEEEeCccHHHHHHHHh-chhhhhcCCCCCCCC
Q 012613 94 VVPFWDCLVKLTSISNVQEDSFACIITDPLWYFV---HAVANDFKLPTIILQTSSVSAYLAFAA-YPILREKCYLPIQDS 169 (460)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~---~~vA~~lgIP~v~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~ 169 (460)
...+.+ +..+.. +||+||+|.....+ ..+|+++|||++.+...+......... ......... ..
T Consensus 80 ~~~~~~-l~~~~~-------~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~----~~ 147 (404)
T 3h4t_A 80 AEWFDK-VPAAIE-------GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGA----DR 147 (404)
T ss_dssp HHHHHH-HHHHHT-------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHH----HH
T ss_pred HHHHHH-HHHHhc-------CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHH----HH
Confidence 222222 222323 79999998665444 688999999999988765421000000 000000000 00
Q ss_pred cccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhhhhcCCCCcccccccccCC
Q 012613 170 QLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIHHQYFSIPVFPIGPFHKYF 249 (460)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~pv~~vGpl~~~~ 249 (460)
.+...+. .++. .+- . ........ .. ..+..+.+..+.+.+. ++++.+++++|++..+.
T Consensus 148 ~~~~~~~---~~~~-~lg--l-~~~~~~~~-------~~-~~~~~l~~~~~~l~p~-------~~~~~~~~~~G~~~~~~ 205 (404)
T 3h4t_A 148 LFGDAVN---SHRA-SIG--L-PPVEHLYD-------YG-YTDQPWLAADPVLSPL-------RPTDLGTVQTGAWILPD 205 (404)
T ss_dssp HHHHHHH---HHHH-HTT--C-CCCCCHHH-------HH-HCSSCEECSCTTTSCC-------CTTCCSCCBCCCCCCCC
T ss_pred HhHHHHH---HHHH-HcC--C-CCCcchhh-------cc-ccCCeEEeeCcceeCC-------CCCCCCeEEeCccccCC
Confidence 0000000 0000 000 0 00000000 00 1122355666766543 22344588999877543
Q ss_pred CCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHH
Q 012613 250 PASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVE 329 (460)
Q Consensus 250 ~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~ 329 (460)
.. ++ ++++.+|++. ++++|||++||+.. ..+.+..+++++++.+.+++|+++....+. ..++
T Consensus 206 ~~----~~--~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~----~~~~----- 267 (404)
T 3h4t_A 206 QR----PL--SAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGR----IDEG----- 267 (404)
T ss_dssp CC----CC--CHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCC----SSCC-----
T ss_pred CC----CC--CHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccccc----ccCC-----
Confidence 22 23 3448889875 56899999999987 667888899999999999999988653111 1123
Q ss_pred hhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCC-ccCHHH
Q 012613 330 MLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDG-NVERRE 408 (460)
Q Consensus 330 ~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~ 408 (460)
+|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|+.+||+.||+++++ .|+|+.+.. +++++.
T Consensus 268 ---~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~~~~~~~~ 341 (404)
T 3h4t_A 268 ---DDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHDGPTPTVES 341 (404)
T ss_dssp ---TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSSSSCCHHH
T ss_pred ---CCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccCcCCCCHHH
Confidence 45599999999999999888 99999999999999999999999999999999999999 599999987 889999
Q ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHh
Q 012613 409 IEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHIL 458 (460)
Q Consensus 409 l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
|.++|+++++ +.|+++++++++.++ . .+.+++++.+++.++
T Consensus 342 l~~ai~~ll~----~~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 342 LSAALATALT----PGIRARAAAVAGTIR----T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp HHHHHHHHTS----HHHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC----HHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHh
Confidence 9999999997 379999999999888 6 778888888887764
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.2e-40 Score=328.63 Aligned_cols=372 Identities=11% Similarity=0.078 Sum_probs=248.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCC-Cc---------------
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSE-TE--------------- 76 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~-~~--------------- 76 (460)
..|||+|++.++.||++|+++||++|+++||+|+|++++........ .|++++.++..... +.
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-AGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSL 97 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-TTCCEEECSCCCCHHHHHHHTTHHHHHHHTTC
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-CCCceeecCCccchHHHhhhhhcccccccccc
Confidence 35899999999999999999999999999999999998643322222 68999999865310 00
Q ss_pred c-----Cc-ccHH---HHHHHHHHhcc-----h-hHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEE
Q 012613 77 A-----ST-EDMV---AILIALNAKCV-----V-PFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIIL 141 (460)
Q Consensus 77 ~-----~~-~~~~---~~~~~~~~~~~-----~-~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~ 141 (460)
. .. .... ..+..+...+. . .+.++++.+++ . +||+||+|..+.++..+|+.+|||++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~-~pDlVv~d~~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 98 DFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-----W-RPDLVIWEPLTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp CCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-----H-CCSEEEECTTCTHHHHHHHHHTCCEEEE
T ss_pred cccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-----c-CCCEEEecCcchhHHHHHHHcCCCEEEE
Confidence 0 00 0111 11111222111 2 45555555554 4 8999999998888899999999999998
Q ss_pred eCccHHHHHHHHhchhhhhcCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhhc---------ccc
Q 012613 142 QTSSVSAYLAFAAYPILREKCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLIK---------ASS 212 (460)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 212 (460)
...+........ +......+.|.. .......+.+........ ..+
T Consensus 172 ~~~~~~~~~~~~--~~~~~~~~~~~~------------------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 225 (441)
T 2yjn_A 172 LWGPDITTRARQ--NFLGLLPDQPEE------------------------HREDPLAEWLTWTLEKYGGPAFDEEVVVGQ 225 (441)
T ss_dssp CSSCCHHHHHHH--HHHHHGGGSCTT------------------------TCCCHHHHHHHHHHHHTTCCCCCGGGTSCS
T ss_pred ecCCCcchhhhh--hhhhhccccccc------------------------cccchHHHHHHHHHHHcCCCCCCccccCCC
Confidence 655432111100 000111111110 000112222222222111 123
Q ss_pred EEEEcCchhccHHHHHHhhhhcCC-CCcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccC---CH
Q 012613 213 GIIWNSYRELEQVELTTIHHQYFS-IPVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNI---DE 288 (460)
Q Consensus 213 ~~l~~~~~~le~~~~~~~~~~~~~-~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~---~~ 288 (460)
..+..+.+.++++ .+++ .++.++++ . .+.++.+|++..+++++|||++||+... ..
T Consensus 226 ~~l~~~~~~~~~~-------~~~~~~~~~~~~~---~----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~ 285 (441)
T 2yjn_A 226 WTIDPAPAAIRLD-------TGLKTVGMRYVDY---N----------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQ 285 (441)
T ss_dssp SEEECSCGGGSCC-------CCCCEEECCCCCC---C----------SSCCCCGGGSSCCSSCEEEEEC----------C
T ss_pred eEEEecCccccCC-------CCCCCCceeeeCC---C----------CCcccchHhhcCCCCCEEEEECCCCcccccChH
Confidence 3455555544431 1111 11222211 0 1122567887656778999999998753 34
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhH
Q 012613 289 TEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESI 368 (460)
Q Consensus 289 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal 368 (460)
+.+..+++++++.+.+++|++++...+. ...+ ++|+.+.+|+||.++|+++++ ||||||+||++||+
T Consensus 286 ~~~~~~~~al~~~~~~~v~~~g~~~~~~---l~~~--------~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~ 352 (441)
T 2yjn_A 286 VSIEELLGAVGDVDAEIIATFDAQQLEG---VANI--------PDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAA 352 (441)
T ss_dssp CSTTTTHHHHHTSSSEEEECCCTTTTSS---CSSC--------CSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEECCcchhh---hccC--------CCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHH
Confidence 5677788999988999999887543111 1122 345699999999999999888 99999999999999
Q ss_pred hcCCceeecccccchhhhHHHhhhhheeeEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChH
Q 012613 369 CEGVPMICQPYLGDQMVNARYISHVWRLGLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSY 447 (460)
Q Consensus 369 ~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 447 (460)
++|||+|++|...||+.||+++++ .|+|+.+.. +++++.|.++|.++|+| +.|+++++++++++. ...+.+
T Consensus 353 ~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~ 424 (441)
T 2yjn_A 353 IHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDML----AEPSPA 424 (441)
T ss_dssp HTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHH
T ss_pred HhCCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH----cCCCHH
Confidence 999999999999999999999999 599999987 79999999999999999 899999999999998 678888
Q ss_pred HHHHHHHHHHh
Q 012613 448 QSLERLIDHIL 458 (460)
Q Consensus 448 ~~~~~~~~~~~ 458 (460)
++++.+.+.+.
T Consensus 425 ~~~~~i~~~~~ 435 (441)
T 2yjn_A 425 EVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887764
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.1e-39 Score=315.96 Aligned_cols=352 Identities=12% Similarity=0.070 Sum_probs=250.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCC------------ccCcccH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSET------------EASTEDM 82 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~------------~~~~~~~ 82 (460)
|||++++.++.||++|++.||++|+++||+|++++++........ .|+.++.++.....+ .......
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG-VGLPAVATTDLPIRHFITTDREGRPEAIPSDPVA 79 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-CCCEEEEeCCcchHHHHhhhcccCccccCcchHH
Confidence 799999999999999999999999999999999998632221112 578888887543100 0010011
Q ss_pred HHHH-HH-HHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhh
Q 012613 83 VAIL-IA-LNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILRE 160 (460)
Q Consensus 83 ~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 160 (460)
...+ .. +...+...+.++.+.+++ . +||+||+|....++..+|+.+|||++.+...+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~l~~-----~-~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------------- 140 (384)
T 2p6p_A 80 QARFTGRWFARMAASSLPRMLDFSRA-----W-RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------------- 140 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-----H-CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc-----c-CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-------------
Confidence 1111 11 112222334444444444 3 8999999988888889999999999987643210
Q ss_pred cCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhh-----ccccEEEEcCchhccHHHHHHhhhhcC
Q 012613 161 KCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLI-----KASSGIIWNSYRELEQVELTTIHHQYF 235 (460)
Q Consensus 161 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~le~~~~~~~~~~~~ 235 (460)
+ ... .......+....... ...+.+++++.+.++++ .. +
T Consensus 141 ----~---~~~----------------------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~~-~ 184 (384)
T 2p6p_A 141 ----A---DGI----------------------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPA------NA-A 184 (384)
T ss_dssp ----C---TTT----------------------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------TS-C
T ss_pred ----c---chh----------------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------CC-C
Confidence 0 000 000011111111111 11567889998888754 21 2
Q ss_pred C-CCcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccC-----CHHHHHHHHHHHhhCCCceEEEE
Q 012613 236 S-IPVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNI-----DETEFLEIAWGLANSRVPFLWVV 309 (460)
Q Consensus 236 ~-~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~i~~~ 309 (460)
+ .++.+++. . . +.++.+|++..+++++||+++||.... ..+.+..+++++++.+.+++|++
T Consensus 185 ~~~~~~~~~~-~--~----------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 251 (384)
T 2p6p_A 185 PARMMRHVAT-S--R----------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAA 251 (384)
T ss_dssp CCEECCCCCC-C--C----------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEEC
T ss_pred CCCceEecCC-C--C----------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEe
Confidence 2 22455531 1 0 112567887655678999999999864 44678889999998899999987
Q ss_pred cCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHH
Q 012613 310 RPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARY 389 (460)
Q Consensus 310 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~ 389 (460)
++.. .+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||++
T Consensus 252 g~~~----------~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~ 317 (384)
T 2p6p_A 252 PDTV----------AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARR 317 (384)
T ss_dssp CHHH----------HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred CCCC----------HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHH
Confidence 6421 0111 124567799 99999999999888 99999999999999999999999999999999999
Q ss_pred hhhhheeeEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHH
Q 012613 390 ISHVWRLGLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHI 457 (460)
Q Consensus 390 v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (460)
+++ .|+|+.+.. +++++.|.++|+++|+| +.|++++++++++++ ...+.+++++.+++.+
T Consensus 318 ~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 318 VAD-YGAAIALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREIS----GMPLPATVVTALEQLA 378 (384)
T ss_dssp HHH-HTSEEECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred HHH-CCCeEecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHh
Confidence 999 599999987 78999999999999999 899999999999999 6778899988888765
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.6e-39 Score=321.59 Aligned_cols=376 Identities=14% Similarity=0.154 Sum_probs=255.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccC----cccHHHHHHH
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEAS----TEDMVAILIA 88 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~----~~~~~~~~~~ 88 (460)
..|||++++.++.||++|++.|+++|+++||+|++++++........ .|++++.++..++..... ..+....+..
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-TGPRPVLYHSTLPGPDADPEAWGSTLLDNVEP 84 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-TSCEEEECCCCSCCTTSCGGGGCSSHHHHHHH
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEEcCCcCccccccccccchhhHHHHHH
Confidence 35799999999999999999999999999999999998744222222 589999988654432211 1233333333
Q ss_pred HHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcCCCCCCC
Q 012613 89 LNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKCYLPIQD 168 (460)
Q Consensus 89 ~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 168 (460)
+...+...+..+.+.+++ . +||+||+|...+++..+|+.+|||++.+++.+..............
T Consensus 85 ~~~~~~~~~~~l~~~l~~-----~-~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~--------- 149 (430)
T 2iyf_A 85 FLNDAIQALPQLADAYAD-----D-IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPM--------- 149 (430)
T ss_dssp HHHHHHHHHHHHHHHHTT-----S-CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHH---------
T ss_pred HHHHHHHHHHHHHHHhhc-----c-CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccch---------
Confidence 333333334444454544 4 8999999988778889999999999998865431000000000000
Q ss_pred CcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHH----------hhhccccEEEEcCchhccHHHHHHhhhhcCCCC
Q 012613 169 SQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMV----------SLIKASSGIIWNSYRELEQVELTTIHHQYFSIP 238 (460)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~p 238 (460)
..++.+. + . ...+...+.... +.....+.+++++.+++++. ...++.+
T Consensus 150 ---~~~~~~~--------~----~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~ 207 (430)
T 2iyf_A 150 ---WREPRQT--------E----R-GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH------ADRVDED 207 (430)
T ss_dssp ---HHHHHHS--------H----H-HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT------GGGSCTT
T ss_pred ---hhhhccc--------h----H-HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC------cccCCCc
Confidence 0000000 0 0 000000011111 11124577899999988865 3445566
Q ss_pred -cccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhC-CCceEEEEcCCcccc
Q 012613 239 -VFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANS-RVPFLWVVRPGLVRE 316 (460)
Q Consensus 239 -v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~ 316 (460)
++++||....... ..+|....+++++||+++||......+.+..+++++++. +.+++|.++.+...
T Consensus 208 ~v~~vG~~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~- 275 (430)
T 2iyf_A 208 VYTFVGACQGDRAE-----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP- 275 (430)
T ss_dssp TEEECCCCC----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG-
T ss_pred cEEEeCCcCCCCCC-----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh-
Confidence 9999986532110 123554445678999999999855567788899999886 77888888754210
Q ss_pred hhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhhee
Q 012613 317 AEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRL 396 (460)
Q Consensus 317 ~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 396 (460)
+....+ ++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..+||..|++++++ .|+
T Consensus 276 -~~l~~~--------~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~ 343 (430)
T 2iyf_A 276 -AELGEL--------PDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGV 343 (430)
T ss_dssp -GGGCSC--------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTS
T ss_pred -HHhccC--------CCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCC
Confidence 111122 345699999999999999998 99999999999999999999999999999999999999 599
Q ss_pred eEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHH
Q 012613 397 GLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHI 457 (460)
Q Consensus 397 G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (460)
|+.+.. +++++.|.++|.++++| +.++++++++++++.+ .++.++.++.+++.+
T Consensus 344 g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 344 ARKLATEEATADLLRETALALVDD---PEVARRLRRIQAEMAQ----EGGTRRAADLIEAEL 398 (430)
T ss_dssp EEECCCC-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HCHHHHHHHHHHTTS
T ss_pred EEEcCCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHh
Confidence 999987 78999999999999999 8899999999998873 456777777776654
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.4e-38 Score=309.96 Aligned_cols=360 Identities=13% Similarity=0.095 Sum_probs=226.9
Q ss_pred ccccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCC-----------C
Q 012613 7 SCRLPRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSE-----------T 75 (460)
Q Consensus 7 ~~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~-----------~ 75 (460)
+|.....+|||+|++.++.||++|+++|+++|+++||+|++++++........ .|+.+..++..... .
T Consensus 8 ~~~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 8 SGVPRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-AGLPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp -------CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-TTCCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CCCCCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-CCCeeEecCCccchHhhhhhhccCcc
Confidence 34445568999999999999999999999999999999999998532222222 57888888632110 0
Q ss_pred cc---Cccc-HHHHHHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHH
Q 012613 76 EA---STED-MVAILIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLA 151 (460)
Q Consensus 76 ~~---~~~~-~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~ 151 (460)
.. .... .......+.......+.++.+.+++ . +||+|++|...+++..+|+.+|||++.+..........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~-~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~ 160 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER-----W-KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI 160 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----H-CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----C-CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh
Confidence 00 0001 1111222222233333344444444 4 89999999888888999999999999876543211000
Q ss_pred HHhchhhhhcCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhh-----hccccEEEEcCchhccHHH
Q 012613 152 FAAYPILREKCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSL-----IKASSGIIWNSYRELEQVE 226 (460)
Q Consensus 152 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~le~~~ 226 (460)
... ..+.+...... ....+..+....+.++..
T Consensus 161 ~~~------------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 197 (398)
T 4fzr_A 161 KSA------------------------------------------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ- 197 (398)
T ss_dssp HHH------------------------------------------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC---
T ss_pred hHH------------------------------------------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC-
Confidence 000 00000000000 011234455555555543
Q ss_pred HHHhhhhcCCCCcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccC--------CHHHHHHHHHHH
Q 012613 227 LTTIHHQYFSIPVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNI--------DETEFLEIAWGL 298 (460)
Q Consensus 227 ~~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~--------~~~~~~~~~~al 298 (460)
......++.+++... ...++..|+...+++++||+++||.... ....+..+++++
T Consensus 198 -----~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al 260 (398)
T 4fzr_A 198 -----PKPGTTKMRYVPYNG------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQEL 260 (398)
T ss_dssp -------CCCEECCCCCCCC------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHG
T ss_pred -----CCCCCCCeeeeCCCC------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHH
Confidence 111112233332210 1112456776656789999999999752 345688899999
Q ss_pred hhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecc
Q 012613 299 ANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQP 378 (460)
Q Consensus 299 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P 378 (460)
.+.+.+++|+.++... +....+ ++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|
T Consensus 261 ~~~~~~~v~~~~~~~~---~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p 327 (398)
T 4fzr_A 261 PKLGFEVVVAVSDKLA---QTLQPL--------PEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVP 327 (398)
T ss_dssp GGGTCEEEECCCC-----------C--------CTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred HhCCCEEEEEeCCcch---hhhccC--------CCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecC
Confidence 9889999988776431 111223 455699999999999999998 999999999999999999999999
Q ss_pred cccchhhhHHHhhhhheeeEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHH
Q 012613 379 YLGDQMVNARYISHVWRLGLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLI 454 (460)
Q Consensus 379 ~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (460)
...||+.|++++++ .|+|+.+.. +++++.|.++|.++|+| +.+++++++.++++. +..+.++.++.+.
T Consensus 328 ~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 328 VIAEVWDSARLLHA-AGAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMA----TLPTPADIVRLIE 396 (398)
T ss_dssp CSGGGHHHHHHHHH-TTSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHT----TSCCHHHHHHHHT
T ss_pred CchhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHh
Confidence 99999999999999 599999987 88999999999999999 899999999999998 6666666655543
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.3e-37 Score=302.84 Aligned_cols=353 Identities=14% Similarity=0.133 Sum_probs=240.9
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCC------------------
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSE------------------ 74 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~------------------ 74 (460)
+.|||+|++.++.||++|++.||++|+++||+|+++++ ........ .|+.++.++....-
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA-AGLEVVDVAPDYSAVKVFEQVAKDNPRFAETV 96 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT-TTCEEEESSTTCCHHHHHHHHHHHCHHHHHTG
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh-CCCeeEecCCccCHHHHhhhcccCCccccccc
Confidence 35999999999999999999999999999999999998 33222222 68999999854210
Q ss_pred ---CccCcccHHHHHHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHH
Q 012613 75 ---TEASTEDMVAILIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLA 151 (460)
Q Consensus 75 ---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~ 151 (460)
.......... .+.......+.++.+.+++ . +||+||+|...+++..+|+.+|||++.....+......
T Consensus 97 ~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~-----~-~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~ 167 (398)
T 3oti_A 97 ATRPAIDLEEWGV---QIAAVNRPLVDGTMALVDD-----Y-RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGM 167 (398)
T ss_dssp GGSCCCSGGGGHH---HHHHHHGGGHHHHHHHHHH-----H-CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTH
T ss_pred cCChhhhHHHHHH---HHHHHHHHHHHHHHHHHHH-----c-CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccch
Confidence 0011111112 2222333344445555544 4 89999999888888999999999999875431100000
Q ss_pred HHhchhhhhcCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhh
Q 012613 152 FAAYPILREKCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIH 231 (460)
Q Consensus 152 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~ 231 (460)
. .. ...................+..+....+.+..+
T Consensus 168 -------~-------------~~------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 203 (398)
T 3oti_A 168 -------H-------------RS------------------IASFLTDLMDKHQVSLPEPVATIESFPPSLLLE------ 203 (398)
T ss_dssp -------H-------------HH------------------HHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTT------
T ss_pred -------h-------------hH------------------HHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC------
Confidence 0 00 000000111110000112233444444444422
Q ss_pred hhcCCCCcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccC--CHHHHHHHHHHHhhCCCceEEEE
Q 012613 232 HQYFSIPVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNI--DETEFLEIAWGLANSRVPFLWVV 309 (460)
Q Consensus 232 ~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~--~~~~~~~~~~al~~~~~~~i~~~ 309 (460)
......++.++. . . ....+.+|+...+++++||+++||.... ..+.+..+++++++.+.+++|+.
T Consensus 204 ~~~~~~~~~~~~-~--~----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~ 270 (398)
T 3oti_A 204 AEPEGWFMRWVP-Y--G----------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLAL 270 (398)
T ss_dssp SCCCSBCCCCCC-C--C----------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEEC
T ss_pred CCCCCCCccccC-C--C----------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEE
Confidence 111112222221 0 0 0112445666556789999999999652 56778889999998899999998
Q ss_pred cCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhH--
Q 012613 310 RPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNA-- 387 (460)
Q Consensus 310 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na-- 387 (460)
++... +....++ +|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.|+
T Consensus 271 g~~~~---~~l~~~~--------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~ 337 (398)
T 3oti_A 271 GDLDI---SPLGTLP--------RNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAR 337 (398)
T ss_dssp TTSCC---GGGCSCC--------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTH
T ss_pred CCcCh---hhhccCC--------CcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHH
Confidence 76531 1122344 45599999999999999998 999999999999999999999999999999999
Q ss_pred HHhhhhheeeEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHh
Q 012613 388 RYISHVWRLGLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHIL 458 (460)
Q Consensus 388 ~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
+++++ .|+|+.++. +++++.|. ++|+| +.|+++++++++++. +..+..+.++.+++.+.
T Consensus 338 ~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 338 EAVSR-RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMV----ALPTPAETVRRIVERIS 397 (398)
T ss_dssp HHHHH-HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHHC
T ss_pred HHHHH-CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHhc
Confidence 99999 599999988 78887776 88999 899999999999998 77888888888877653
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=7e-36 Score=291.72 Aligned_cols=356 Identities=14% Similarity=0.145 Sum_probs=237.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEc-CCCCC--CC--------c--cCcc
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSI-SASLS--ET--------E--ASTE 80 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~-~~~~~--~~--------~--~~~~ 80 (460)
+|||+|++.++.||++|++.|+++|+++||+|++++++........ .|+.++.+ +.... .. . ....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG-AGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQR 79 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH-BTCEEEEC--------------CCSCCGGGGCT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh-CCCceeeecCCccchhhhhhhcccccccccccc
Confidence 5899999999999999999999999999999999997532221212 57888887 32110 00 0 0000
Q ss_pred cHHHHHHHHHHhcchh-------HHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHHHHHHH
Q 012613 81 DMVAILIALNAKCVVP-------FWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSAYLAFA 153 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~-------l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~ 153 (460)
........+....... +.++.+.+++ . +||+|++|...+.+..+|+.+|||++.+..........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~-~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~-- 151 (391)
T 3tsa_A 80 DTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-----W-RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAGP-- 151 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----H-CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTTH--
T ss_pred cchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-----c-CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccccc--
Confidence 0011111111211122 4444444444 4 89999999887888889999999999976442110000
Q ss_pred hchhhhhcCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhh-----ccccEEEEcCchhccHHHHH
Q 012613 154 AYPILREKCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLI-----KASSGIIWNSYRELEQVELT 228 (460)
Q Consensus 154 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~le~~~~~ 228 (460)
......+.+....... ...+..+....++++..
T Consensus 152 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 189 (391)
T 3tsa_A 152 ---------------------------------------FSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS--- 189 (391)
T ss_dssp ---------------------------------------HHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT---
T ss_pred ---------------------------------------ccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC---
Confidence 0000111111111111 11144555555555433
Q ss_pred HhhhhcCCCCcccccccccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCccc--CC-HHHHHHHHHHHhhC-CCc
Q 012613 229 TIHHQYFSIPVFPIGPFHKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVN--ID-ETEFLEIAWGLANS-RVP 304 (460)
Q Consensus 229 ~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~--~~-~~~~~~~~~al~~~-~~~ 304 (460)
......++.++ |.. ....+..|+...+++++|++++||... .. ...+..++++ ++. +.+
T Consensus 190 ---~~~~~~~~~~~-p~~------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~ 252 (391)
T 3tsa_A 190 ---DAPQGAPVQYV-PYN------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE 252 (391)
T ss_dssp ---TSCCCEECCCC-CCC------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE
T ss_pred ---CCCccCCeeee-cCC------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE
Confidence 11111223444 111 111244677655678999999999854 33 6678888888 877 778
Q ss_pred eEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchh
Q 012613 305 FLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQM 384 (460)
Q Consensus 305 ~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~ 384 (460)
++|+.++... +....+ ++|+.+.+|+|+.++|+++|+ ||||||.||++||+++|+|+|++|...||+
T Consensus 253 ~v~~~~~~~~---~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~ 319 (391)
T 3tsa_A 253 AVIAVPPEHR---ALLTDL--------PDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQF 319 (391)
T ss_dssp EEEECCGGGG---GGCTTC--------CTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred EEEEECCcch---hhcccC--------CCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHH
Confidence 8888765421 111223 345599999999999999888 999999999999999999999999999999
Q ss_pred hhHHHhhhhheeeEecCC---ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHh
Q 012613 385 VNARYISHVWRLGLHLDG---NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHIL 458 (460)
Q Consensus 385 ~na~~v~~~~G~G~~l~~---~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
.|+.++++ .|+|+.+.. +.+++.|.++|.++|+| +.++++++++++.+. +..+..++++.+.+.+.
T Consensus 320 ~~a~~~~~-~g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 320 DYARNLAA-AGAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEIT----AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHH-TTSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHH----TSCCHHHHHHHHHHC--
T ss_pred HHHHHHHH-cCCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHh
Confidence 99999999 599999875 47999999999999999 899999999999998 77888888888877654
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=2.1e-33 Score=276.05 Aligned_cols=366 Identities=17% Similarity=0.173 Sum_probs=245.5
Q ss_pred cccccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCC------------
Q 012613 6 ESCRLPRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLS------------ 73 (460)
Q Consensus 6 ~~~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~------------ 73 (460)
.++.....+|||++++.++.||++|++.||++|+++||+|++++++........ .|+.++.++..+.
T Consensus 12 ~~~~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 12 SSGHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-LGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp ------CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred ccCCcccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-cCCceeecCcccccchhhhhhhhhc
Confidence 445555668999999999999999999999999999999999998632111112 5888988874100
Q ss_pred CCccCcccHHH----HHHHHHHh-cchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHHH
Q 012613 74 ETEASTEDMVA----ILIALNAK-CVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVSA 148 (460)
Q Consensus 74 ~~~~~~~~~~~----~~~~~~~~-~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~~ 148 (460)
........... ....+... ....+..+.+.+++ . +||+|++|....++..+|+.+|||++.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~-~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-----L-RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-----H-CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-----c-CCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 00000000111 11111111 11122333344444 3 89999999877778889999999999875442210
Q ss_pred HHHHHhchhhhhcCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhh----------hccccEEEEcC
Q 012613 149 YLAFAAYPILREKCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSL----------IKASSGIIWNS 218 (460)
Q Consensus 149 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~ 218 (460)
.... ....+.+...... ...++.++..+
T Consensus 165 ~~~~------------------------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~ 202 (412)
T 3otg_A 165 DDLT------------------------------------------RSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIF 202 (412)
T ss_dssp SHHH------------------------------------------HHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECS
T ss_pred hhhh------------------------------------------HHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeC
Confidence 0000 0000011111110 12345566666
Q ss_pred chhccHHHHHHhhhhcCCC---CcccccccccCCCCCCCCcccccccchhh-hccCCCCeEEEEEccCcccCCHHHHHHH
Q 012613 219 YRELEQVELTTIHHQYFSI---PVFPIGPFHKYFPASSSSLLSQDESCISW-LDKHAPKSVIYVSFGSVVNIDETEFLEI 294 (460)
Q Consensus 219 ~~~le~~~~~~~~~~~~~~---pv~~vGpl~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vI~vs~GS~~~~~~~~~~~~ 294 (460)
.+.++.. ...+.. ++.++++- ......+| ....+++++|++++||........+..+
T Consensus 203 ~~~~~~~------~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 203 PPSLQEP------EFRARPRRHELRPVPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp CGGGSCH------HHHTCTTEEECCCCCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred CHHhcCC------cccCCCCcceeeccCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 6666644 111111 12222211 01113455 2323567899999999976667788889
Q ss_pred HHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcCCce
Q 012613 295 AWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPM 374 (460)
Q Consensus 295 ~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~ 374 (460)
++++++.+.+++|++++.... +....++ +|+.+.+|+|+.++|+++|+ ||+|||.+|++||+++|+|+
T Consensus 264 ~~~l~~~~~~~~~~~g~~~~~--~~l~~~~--------~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~ 331 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSLDV--SGLGEVP--------ANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQ 331 (412)
T ss_dssp HHHHHTSSSEEEEECCSSCCC--TTCCCCC--------TTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCE
T ss_pred HHHHHcCCCEEEEEECCCCCh--hhhccCC--------CcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCE
Confidence 999998888999988765310 1122233 45599999999999999998 99999999999999999999
Q ss_pred eecccccchhhhHHHhhhhheeeEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHH
Q 012613 375 ICQPYLGDQMVNARYISHVWRLGLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERL 453 (460)
Q Consensus 375 v~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 453 (460)
|++|...||..|++.+++ .|+|..+.. +++++.|.++|.++|+| +.+++++.+.++++. +..+.++.++.+
T Consensus 332 v~~p~~~~q~~~~~~v~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 403 (412)
T 3otg_A 332 LSFPWAGDSFANAQAVAQ-AGAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIA----AMPGPDEVVRLL 403 (412)
T ss_dssp EECCCSTTHHHHHHHHHH-HTSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HSCCHHHHHTTH
T ss_pred EecCCchhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHh----cCCCHHHHHHHH
Confidence 999999999999999999 599999988 78999999999999999 889999999999988 567888888888
Q ss_pred HHHHhc
Q 012613 454 IDHILS 459 (460)
Q Consensus 454 ~~~~~~ 459 (460)
.+.+++
T Consensus 404 ~~l~~~ 409 (412)
T 3otg_A 404 PGFASR 409 (412)
T ss_dssp HHHHC-
T ss_pred HHHhcc
Confidence 887653
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.9e-28 Score=235.94 Aligned_cols=310 Identities=13% Similarity=0.122 Sum_probs=188.9
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCeEEEEcCC-CCCCCccCcccHHHHHHHHHH
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPL-NACNYPHFEFHSISA-SLSETEASTEDMVAILIALNA 91 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~-~~~~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 91 (460)
++||++...|+.||++|.++||++|+++||+|+|++++...+ ......|+.++.++. ++... .....+.....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~-----~~~~~~~~~~~ 76 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGK-----GLKSLVKAPLE 76 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC-------------------CHHH
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCC-----CHHHHHHHHHH
Confidence 578999888888999999999999999999999999864331 111225788888873 22211 11111111111
Q ss_pred hcchhHHHHHHHhhccCCCCCCCeeEEEECCcchh--HHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcCCCCCCCC
Q 012613 92 KCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYF--VHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKCYLPIQDS 169 (460)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 169 (460)
... .+....+-+++ . +||+||++..+.+ +..+|+.+|||++...... +|.
T Consensus 77 ~~~-~~~~~~~~l~~-----~-~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~------------------~~G--- 128 (365)
T 3s2u_A 77 LLK-SLFQALRVIRQ-----L-RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA------------------VAG--- 128 (365)
T ss_dssp HHH-HHHHHHHHHHH-----H-CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS------------------SCC---
T ss_pred HHH-HHHHHHHHHHh-----c-CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch------------------hhh---
Confidence 111 12222333333 3 8999999976643 4567999999999753210 000
Q ss_pred cccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhhhhcCCCCcccccccccCC
Q 012613 170 QLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIHHQYFSIPVFPIGPFHKYF 249 (460)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~pv~~vGpl~~~~ 249 (460)
. ..+. ..+.++.++. ++++..+. ..+++++|......
T Consensus 129 -~-------------------------~nr~------l~~~a~~v~~-~~~~~~~~----------~~k~~~~g~pvr~~ 165 (365)
T 3s2u_A 129 -T-------------------------ANRS------LAPIARRVCE-AFPDTFPA----------SDKRLTTGNPVRGE 165 (365)
T ss_dssp -H-------------------------HHHH------HGGGCSEEEE-SSTTSSCC-------------CEECCCCCCGG
T ss_pred -h-------------------------HHHh------hccccceeee-cccccccC----------cCcEEEECCCCchh
Confidence 0 0000 0112233332 33321110 12366677544322
Q ss_pred CCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhC----CCceEEEEcCCcccchhhhccCch
Q 012613 250 PASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANS----RVPFLWVVRPGLVREAEWLELLPT 325 (460)
Q Consensus 250 ~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~l~~ 325 (460)
.. ... ..+....++++.|++..||.... ...+.+.+++... +..+++.++.... +.+.+
T Consensus 166 ~~-----~~~----~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~------~~~~~ 228 (365)
T 3s2u_A 166 LF-----LDA----HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHA------EITAE 228 (365)
T ss_dssp GC-----CCT----TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTH------HHHHH
T ss_pred hc-----cch----hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcccc------ccccc
Confidence 11 000 01111123668999999998742 2334455666554 3446666654421 11112
Q ss_pred hHHHhhcCCceeeeccChH-HhhcCCCccceeeccCchhHHHhHhcCCceeecccc----cchhhhHHHhhhhheeeEec
Q 012613 326 GFVEMLDGRGHIVKWAPQQ-EVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYL----GDQMVNARYISHVWRLGLHL 400 (460)
Q Consensus 326 ~~~~~~~~~~~~~~~vp~~-~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~~G~G~~l 400 (460)
.+ ...+.|+.+.+|+++. ++|..+|+ +|||+|.+|++|++++|+|+|++|+. .+|..||+.+++ .|+|+.+
T Consensus 229 ~~-~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~-~G~a~~l 304 (365)
T 3s2u_A 229 RY-RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR-SGAGRLL 304 (365)
T ss_dssp HH-HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT-TTSEEEC
T ss_pred ee-cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH-CCCEEEe
Confidence 21 2334567889999985 69999999 99999999999999999999999973 579999999999 5999999
Q ss_pred CC-ccCHHHHHHHHHHHhccc
Q 012613 401 DG-NVERREIEIAVRRVMIET 420 (460)
Q Consensus 401 ~~-~~~~~~l~~ai~~vl~~~ 420 (460)
.. +++++.|.++|.++|+|+
T Consensus 305 ~~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 305 PQKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp CTTTCCHHHHHHHHHHHHHCT
T ss_pred ecCCCCHHHHHHHHHHHHCCH
Confidence 88 899999999999999993
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.4e-27 Score=202.16 Aligned_cols=160 Identities=26% Similarity=0.422 Sum_probs=135.0
Q ss_pred cccchhhhccCCCCeEEEEEccCccc-CCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceee
Q 012613 260 DESCISWLDKHAPKSVIYVSFGSVVN-IDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIV 338 (460)
Q Consensus 260 ~~~l~~~l~~~~~~~vI~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 338 (460)
+.++.+|++..+++++||+++||... ...+.+..+++++++.+.+++|++++.. ...++ +|+.+.
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~~~~~--------~~v~~~ 73 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK------PDTLG--------LNTRLY 73 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC------CTTCC--------TTEEEE
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC------cccCC--------CcEEEe
Confidence 34589999876677999999999963 5677888899999988899999987542 11233 455999
Q ss_pred eccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCC-ccCHHHHHHHHHHHh
Q 012613 339 KWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDG-NVERREIEIAVRRVM 417 (460)
Q Consensus 339 ~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl 417 (460)
+|+|+.+++.|+.+++||||||.||++||+++|+|+|++|...||..||+++++ .|+|+.++. +++.+.|.++|.+++
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHHHH
Confidence 999999999555555599999999999999999999999999999999999999 599999987 789999999999999
Q ss_pred ccccHHHHHHHHHHHHHHHH
Q 012613 418 IETEGQEMRERILYSKEKAH 437 (460)
Q Consensus 418 ~~~~~~~~~~~a~~~~~~~~ 437 (460)
+| +.|+++++++++.++
T Consensus 153 ~~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 153 ND---PSYKENVMKLSRIQH 169 (170)
T ss_dssp HC---HHHHHHHHHHC----
T ss_pred cC---HHHHHHHHHHHHHhh
Confidence 99 889999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=1.4e-20 Score=181.25 Aligned_cols=339 Identities=13% Similarity=0.092 Sum_probs=205.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCeEEEEcCCC-CCCCccCcccHHHHHHHHHH
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPL-NACNYPHFEFHSISAS-LSETEASTEDMVAILIALNA 91 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~-~~~~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 91 (460)
+|||++++.+..||..++..|+++|+++||+|++++...... ......|+.+..++.. +.. ......+.....
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~ 80 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRG-----KGIKALIAAPLR 80 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTT-----CCHHHHHTCHHH
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCc-----CccHHHHHHHHH
Confidence 389999998877999999999999999999999999864321 1111147888777632 211 111111110000
Q ss_pred hcchhHHHHHHHhhccCCCCCCCeeEEEECCcc--hhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcCCCCCCCC
Q 012613 92 KCVVPFWDCLVKLTSISNVQEDSFACIITDPLW--YFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKCYLPIQDS 169 (460)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 169 (460)
. ...+..+.+.+++ . +||+|+++... ..+..+++.+++|++....... +
T Consensus 81 ~-~~~~~~l~~~l~~-----~-~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------~---- 131 (364)
T 1f0k_A 81 I-FNAWRQARAIMKA-----Y-KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------A---- 131 (364)
T ss_dssp H-HHHHHHHHHHHHH-----H-CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------------C----
T ss_pred H-HHHHHHHHHHHHh-----c-CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------------C----
Confidence 0 0112233333433 3 89999998643 3455678889999987432210 0
Q ss_pred cccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhhhhcCCCCcccccccccCC
Q 012613 170 QLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIHHQYFSIPVFPIGPFHKYF 249 (460)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~pv~~vGpl~~~~ 249 (460)
. .. .+ .....++.+++.+... + +++..+|......
T Consensus 132 ----------------------~----~~---~~--~~~~~~d~v~~~~~~~-------------~-~~~~~i~n~v~~~ 166 (364)
T 1f0k_A 132 ----------------------G----LT---NK--WLAKIATKVMQAFPGA-------------F-PNAEVVGNPVRTD 166 (364)
T ss_dssp ----------------------C----HH---HH--HHTTTCSEEEESSTTS-------------S-SSCEECCCCCCHH
T ss_pred ----------------------c----HH---HH--HHHHhCCEEEecChhh-------------c-CCceEeCCccchh
Confidence 0 00 00 0112344444433211 1 1344444322110
Q ss_pred CCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhC--CCceEEEEcCCcccchhhhccCchhH
Q 012613 250 PASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANS--RVPFLWVVRPGLVREAEWLELLPTGF 327 (460)
Q Consensus 250 ~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~ 327 (460)
. ...+. ....+....++++|++..|+... .+....++++++.+ +.++++.++.+.. ..+.+.+
T Consensus 167 ~------~~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~------~~l~~~~ 231 (364)
T 1f0k_A 167 V------LALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQ------QSVEQAY 231 (364)
T ss_dssp H------HTSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCH------HHHHHHH
T ss_pred h------cccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchH------HHHHHHH
Confidence 0 00000 01122222355778888888753 44445566666654 4555666665431 1111111
Q ss_pred HHhhc-CCceeeeccCh-HHhhcCCCccceeeccCchhHHHhHhcCCceeecccc---cchhhhHHHhhhhheeeEecCC
Q 012613 328 VEMLD-GRGHIVKWAPQ-QEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYL---GDQMVNARYISHVWRLGLHLDG 402 (460)
Q Consensus 328 ~~~~~-~~~~~~~~vp~-~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~G~~l~~ 402 (460)
. +.. +|+.+.+|+++ .+++..+|+ +|+++|.+++.||+++|+|+|+.|.. .||..|++.+.+. |.|..++.
T Consensus 232 ~-~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~ 307 (364)
T 1f0k_A 232 A-EAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQ 307 (364)
T ss_dssp H-HTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCG
T ss_pred h-hcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecc
Confidence 1 112 47789999954 579999998 99999989999999999999999987 7899999999994 99998887
Q ss_pred -ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 403 -NVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 403 -~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
+++.+.+.++|.++ | +..+++..+-+.+.. +..+.++.++.+++.+++
T Consensus 308 ~d~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 308 PQLSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRVARA 356 (364)
T ss_dssp GGCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHH
Confidence 77899999999999 6 444444433333332 467788889999888865
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.65 E-value=6.8e-15 Score=134.43 Aligned_cols=116 Identities=9% Similarity=0.049 Sum_probs=89.3
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhh--cCCceeeeccChH-Hhhc
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEML--DGRGHIVKWAPQQ-EVLA 348 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~vp~~-~ll~ 348 (460)
..+.|+|++|.... ......+++++.+.. ++.++++.+.. ..+.+.+.. ..|+.+..|+++. ++|.
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~~--------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSNP--------NLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTCT--------THHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCch--------HHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 45789999997643 335566888887654 56666665431 222232221 1367889999987 5999
Q ss_pred CCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCC
Q 012613 349 HPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDG 402 (460)
Q Consensus 349 ~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 402 (460)
.+|+ +|++|| +|++|+++.|+|+|++|...+|..||+.+++ .|+++.+..
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 9999 999999 8999999999999999999999999999999 599998865
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.62 E-value=6.5e-16 Score=135.33 Aligned_cols=139 Identities=13% Similarity=0.070 Sum_probs=96.8
Q ss_pred CCCeEEEEEccCcccCCHHHHHHH-----HHHHhhCC-CceEEEEcCCcccchh-hhcc---------CchhH-------
Q 012613 271 APKSVIYVSFGSVVNIDETEFLEI-----AWGLANSR-VPFLWVVRPGLVREAE-WLEL---------LPTGF------- 327 (460)
Q Consensus 271 ~~~~vI~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~-~~~~---------l~~~~------- 327 (460)
.+++.|||+.||... -.+.+..+ +++|.+.+ .++++.++....+..+ .... +|.+.
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 467899999999842 23444433 48888777 7888998875420000 0000 11100
Q ss_pred H----HhhcCCceeeeccChH-Hhhc-CCCccceeeccCchhHHHhHhcCCceeecccc----cchhhhHHHhhhhheee
Q 012613 328 V----EMLDGRGHIVKWAPQQ-EVLA-HPAVGGFLTHGGWNSTLESICEGVPMICQPYL----GDQMVNARYISHVWRLG 397 (460)
Q Consensus 328 ~----~~~~~~~~~~~~vp~~-~ll~-~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~~G~G 397 (460)
. .....++.+.+|+++. ++|+ .+|+ +|||||+||++|++++|+|+|++|.. .||..||+++++ .|++
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~-~G~~ 181 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE-LGYV 181 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH-HSCC
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH-CCCE
Confidence 0 0000133456888876 7999 9999 99999999999999999999999974 469999999999 5998
Q ss_pred EecCCccCHHHHHHHHHHHh
Q 012613 398 LHLDGNVERREIEIAVRRVM 417 (460)
Q Consensus 398 ~~l~~~~~~~~l~~ai~~vl 417 (460)
+.+ +++.|.++|.++.
T Consensus 182 ~~~----~~~~L~~~i~~l~ 197 (224)
T 2jzc_A 182 WSC----APTETGLIAGLRA 197 (224)
T ss_dssp CEE----CSCTTTHHHHHHH
T ss_pred EEc----CHHHHHHHHHHHH
Confidence 765 5677778887773
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.49 E-value=2.3e-11 Score=119.77 Aligned_cols=367 Identities=14% Similarity=0.068 Sum_probs=190.5
Q ss_pred CCceEEEEcC-----------CCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC---CCCCCeEEEEcCCCCCCCccC
Q 012613 13 NGKRVILFPL-----------PYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNA---CNYPHFEFHSISASLSETEAS 78 (460)
Q Consensus 13 ~~~~Il~~~~-----------~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~---~~~~gi~~~~~~~~~~~~~~~ 78 (460)
+.|||++++. ...|+-..+..|+++|.++||+|++++........ ....+++++.++....... .
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~-~ 97 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL-S 97 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC-C
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc-c
Confidence 3589999985 23588889999999999999999999875332111 1125777777763221111 1
Q ss_pred cccHHHHHHHHHHhcchhHHHHHHH-hhccCCCCCCCeeEEEECCcc--hhHHHHHHHcCCCeEEEeCccHHHHHHHHhc
Q 012613 79 TEDMVAILIALNAKCVVPFWDCLVK-LTSISNVQEDSFACIITDPLW--YFVHAVANDFKLPTIILQTSSVSAYLAFAAY 155 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~ 155 (460)
.......+..+ ...+++. ++. . . +||+|++.... ..+..+++.+++|+|..........
T Consensus 98 ~~~~~~~~~~~-------~~~~~~~~~~~---~-~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------ 159 (438)
T 3c48_A 98 KEELPTQLAAF-------TGGMLSFTRRE---K-V-TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK------ 159 (438)
T ss_dssp GGGGGGGHHHH-------HHHHHHHHHHH---T-C-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH------
T ss_pred hhHHHHHHHHH-------HHHHHHHHHhc---c-C-CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc------
Confidence 11111111111 1112222 222 1 2 59999987533 2334567888999988654422100
Q ss_pred hhhhhcCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHH--HHHHhhhccccEEEEcCchhccHHHHHHhhhh
Q 012613 156 PILREKCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVI--SAMVSLIKASSGIIWNSYRELEQVELTTIHHQ 233 (460)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~ 233 (460)
.... .......... .........++.+++.+....+.- ..
T Consensus 160 -----~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~------~~ 201 (438)
T 3c48_A 160 -----NSYR---------------------------DDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDL------MH 201 (438)
T ss_dssp -----SCC-------------------------------CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHH------HH
T ss_pred -----cccc---------------------------cccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHH------HH
Confidence 0000 0000000001 111223456788888876554432 22
Q ss_pred cCC---CCcccccccccCCCCCCCCccccc--ccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhC-----CC
Q 012613 234 YFS---IPVFPIGPFHKYFPASSSSLLSQD--ESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANS-----RV 303 (460)
Q Consensus 234 ~~~---~pv~~vGpl~~~~~~~~~~~~~~~--~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~-----~~ 303 (460)
.++ .++..|+........ .+.+.. ..+.+-+.- +++..+++..|+... .+....+++|++.+ +.
T Consensus 202 ~~g~~~~k~~vi~ngvd~~~~---~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~ 275 (438)
T 3c48_A 202 HYDADPDRISVVSPGADVELY---SPGNDRATERSRRELGI-PLHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDR 275 (438)
T ss_dssp HHCCCGGGEEECCCCCCTTTS---CCC----CHHHHHHTTC-CSSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTC
T ss_pred HhCCChhheEEecCCcccccc---CCcccchhhhhHHhcCC-CCCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCc
Confidence 121 124444432221110 000000 001222221 133456677788753 23334444444432 11
Q ss_pred ce-EEEEcCCcccchhhhccCchhHHH-hhcCCceeeeccChH---HhhcCCCccceeecc----CchhHHHhHhcCCce
Q 012613 304 PF-LWVVRPGLVREAEWLELLPTGFVE-MLDGRGHIVKWAPQQ---EVLAHPAVGGFLTHG----GWNSTLESICEGVPM 374 (460)
Q Consensus 304 ~~-i~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~vp~~---~ll~~~~~~~~I~HG----G~gs~~eal~~GvP~ 374 (460)
.+ ++.++....++.. ...+-.-+.+ ...+|+.+.+++|+. +++..+|+ +|.-. ...++.||+++|+|+
T Consensus 276 ~~~l~i~G~~~~~g~~-~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~Pv 352 (438)
T 3c48_A 276 NLRVIICGGPSGPNAT-PDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPV 352 (438)
T ss_dssp SEEEEEECCBC-------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCE
T ss_pred ceEEEEEeCCCCCCcH-HHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCE
Confidence 22 3334431100100 0011111111 123567899999864 58889998 77653 345899999999999
Q ss_pred eecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc-HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHH
Q 012613 375 ICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE-GQEMRERILYSKEKAHLCLKPGGSSYQSLERL 453 (460)
Q Consensus 375 v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 453 (460)
|+.+. ......+++. +.|..++. -+.+++.++|.++++|++ ...+.+++++..+.+ +.++.++++
T Consensus 353 I~~~~----~~~~e~i~~~-~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~--------s~~~~~~~~ 418 (438)
T 3c48_A 353 IAARV----GGLPIAVAEG-ETGLLVDG-HSPHAWADALATLLDDDETRIRMGEDAVEHARTF--------SWAATAAQL 418 (438)
T ss_dssp EEESC----TTHHHHSCBT-TTEEEESS-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--------HHHHHHHHH
T ss_pred EecCC----CChhHHhhCC-CcEEECCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC--------CHHHHHHHH
Confidence 99764 4566677773 67877765 578999999999999843 334555555555443 367777777
Q ss_pred HHHHhc
Q 012613 454 IDHILS 459 (460)
Q Consensus 454 ~~~~~~ 459 (460)
++.+++
T Consensus 419 ~~~~~~ 424 (438)
T 3c48_A 419 SSLYND 424 (438)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.49 E-value=1.8e-12 Score=125.62 Aligned_cols=345 Identities=12% Similarity=0.032 Sum_probs=189.2
Q ss_pred CCCceEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC---CCCCCCCeEEEEcCCCCCCCccCcccHHH
Q 012613 12 RNGKRVILFPL--P--YQGHINPMLQIASVLYSKGFSITIIHTNLNPL---NACNYPHFEFHSISASLSETEASTEDMVA 84 (460)
Q Consensus 12 ~~~~~Il~~~~--~--~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~---~~~~~~gi~~~~~~~~~~~~~~~~~~~~~ 84 (460)
+++|||++++. + ..|.-..+..+++.| +||+|++++...... ......++.+..++....-. ..
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-- 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLP-----TP-- 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCS-----CH--
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEcccccccc-----ch--
Confidence 45799999874 3 458888999999999 799999998864332 11122577888877422111 01
Q ss_pred HHHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcc--hhHHHHHHHcCCCeEEEeCccHHHHHHHHhchhhhhcC
Q 012613 85 ILIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLW--YFVHAVANDFKLPTIILQTSSVSAYLAFAAYPILREKC 162 (460)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (460)
..+..+.+.+++ . +||+|++.... .....+++.+++|.+++.........
T Consensus 73 ----------~~~~~l~~~~~~-----~-~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------ 124 (394)
T 3okp_A 73 ----------TTAHAMAEIIRE-----R-EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------------ 124 (394)
T ss_dssp ----------HHHHHHHHHHHH-----T-TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH------------
T ss_pred ----------hhHHHHHHHHHh-----c-CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh------------
Confidence 111122233333 3 89999976544 23445688899995554332111000
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhhhhcCC--CCcc
Q 012613 163 YLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIHHQYFS--IPVF 240 (460)
Q Consensus 163 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~--~pv~ 240 (460)
... ...+. ........++.+++.+....+.- ...+. .++.
T Consensus 125 -----------------------------~~~-~~~~~--~~~~~~~~~d~ii~~s~~~~~~~------~~~~~~~~~~~ 166 (394)
T 3okp_A 125 -----------------------------SML-PGSRQ--SLRKIGTEVDVLTYISQYTLRRF------KSAFGSHPTFE 166 (394)
T ss_dssp -----------------------------TTS-HHHHH--HHHHHHHHCSEEEESCHHHHHHH------HHHHCSSSEEE
T ss_pred -----------------------------hhc-chhhH--HHHHHHHhCCEEEEcCHHHHHHH------HHhcCCCCCeE
Confidence 000 01111 11223456788888776544432 22121 2344
Q ss_pred cccccccCCCCCCCCc-cc-ccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhC-----CCceEEEEcCCc
Q 012613 241 PIGPFHKYFPASSSSL-LS-QDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANS-----RVPFLWVVRPGL 313 (460)
Q Consensus 241 ~vGpl~~~~~~~~~~~-~~-~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~ 313 (460)
.+..-...... .+ .+ ....+.+.+.- +++..+++..|+... .+.+..++++++.+ +.+++++ +.+.
T Consensus 167 vi~ngv~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~ 239 (394)
T 3okp_A 167 HLPSGVDVKRF---TPATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLIV-GSGR 239 (394)
T ss_dssp ECCCCBCTTTS---CCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEEE-CCCT
T ss_pred EecCCcCHHHc---CCCCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEE-cCch
Confidence 44432221111 01 00 11112222222 234466777788643 23344444544332 3444444 4322
Q ss_pred ccchhhhccCchhHHHhhcCCceeeeccChHH---hhcCCCccceee-----------ccCchhHHHhHhcCCceeeccc
Q 012613 314 VREAEWLELLPTGFVEMLDGRGHIVKWAPQQE---VLAHPAVGGFLT-----------HGGWNSTLESICEGVPMICQPY 379 (460)
Q Consensus 314 ~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~---ll~~~~~~~~I~-----------HGG~gs~~eal~~GvP~v~~P~ 379 (460)
. . +....+. ....+++.+.+|+|+.+ ++..+++ +|. -|.-.++.||+++|+|+|+.+.
T Consensus 240 ~-~-~~l~~~~----~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~ 311 (394)
T 3okp_A 240 Y-E-STLRRLA----TDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTS 311 (394)
T ss_dssp T-H-HHHHHHT----GGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSS
T ss_pred H-H-HHHHHHH----hcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCC
Confidence 0 0 1011111 22345678999998654 7889998 776 5556789999999999999765
Q ss_pred ccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc-HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHh
Q 012613 380 LGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE-GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHIL 458 (460)
Q Consensus 380 ~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
. .....+.+ |.|..++. -+.+++.++|.++++|++ ...+.+++++..+ +.-+.+..++.+.+.++
T Consensus 312 ~----~~~e~i~~--~~g~~~~~-~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~ 377 (394)
T 3okp_A 312 G----GAPETVTP--ATGLVVEG-SDVDKLSELLIELLDDPIRRAAMGAAGRAHVE-------AEWSWEIMGERLTNILQ 377 (394)
T ss_dssp T----TGGGGCCT--TTEEECCT-TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-------HHTBHHHHHHHHHHHHH
T ss_pred C----ChHHHHhc--CCceEeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHH
Confidence 3 33344444 57766665 578999999999999832 2233333333322 33568889999998887
Q ss_pred cC
Q 012613 459 SF 460 (460)
Q Consensus 459 ~~ 460 (460)
++
T Consensus 378 ~~ 379 (394)
T 3okp_A 378 SE 379 (394)
T ss_dssp SC
T ss_pred Hh
Confidence 63
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.48 E-value=2e-11 Score=120.07 Aligned_cols=383 Identities=13% Similarity=0.032 Sum_probs=194.5
Q ss_pred CCceEEEEcCC-----CccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-------------------CCCCeEEEEc
Q 012613 13 NGKRVILFPLP-----YQGHINPMLQIASVLYSKGFSITIIHTNLNPLNAC-------------------NYPHFEFHSI 68 (460)
Q Consensus 13 ~~~~Il~~~~~-----~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~-------------------~~~gi~~~~~ 68 (460)
++|||++++.. ..|--.-+..||++|+++||+|+++++........ ...|+++..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 47999999832 34556678999999999999999999753332110 2257777777
Q ss_pred CCCCCCCccCcccHHHH-HHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcch--hHHHHHHHcCCCeEEEeCcc
Q 012613 69 SASLSETEASTEDMVAI-LIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWY--FVHAVANDFKLPTIILQTSS 145 (460)
Q Consensus 69 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~--~~~~vA~~lgIP~v~~~~~~ 145 (460)
+...-............ ...+.... ..+...++.+.. . .. +||+|.+..... .+..+++..++|+|......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~-~~-~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~ 155 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFG-RASVLLLNDLLR--E-EP-LPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRL 155 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHH-HHHHHHHHHHTT--T-SC-CCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCC
T ss_pred cchhccccccccCCcchhhhhhHHHH-HHHHHHHHHHhc--c-CC-CCeEEEecchhhhhhHHHHhhccCCCEEEEeccc
Confidence 64111111111101111 22221111 223344444421 0 13 899999876543 24556788899999865432
Q ss_pred HHHHHHHHhchhhhhcCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhhccccEEEEcCchhccHH
Q 012613 146 VSAYLAFAAYPILREKCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLIKASSGIIWNSYRELEQV 225 (460)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~ 225 (460)
.... .+. . .+ . ...+..... ...... .......++.++..|....+..
T Consensus 156 ~~~~-----~~~---~--------~~--~-----~~~~~~~~~---~~~~~~------~~~~~~~ad~ii~~S~~~~~~~ 203 (439)
T 3fro_A 156 NKSK-----LPA---F--------YF--H-----EAGLSELAP---YPDIDP------EHTGGYIADIVTTVSRGYLIDE 203 (439)
T ss_dssp CCCC-----EEH---H--------HH--H-----HTTCGGGCC---SSEECH------HHHHHHHCSEEEESCHHHHHHT
T ss_pred cccc-----Cch---H--------Hh--C-----ccccccccc---cceeeH------hhhhhhhccEEEecCHHHHHHH
Confidence 1000 000 0 00 0 000000000 000011 1222346777788776544431
Q ss_pred HHHHhhhhcCCCCcccccccccCCCCCCCCccc-----ccccchhhhccCCCCeEEEEEccCcc-c-CCHHHHHHHHHHH
Q 012613 226 ELTTIHHQYFSIPVFPIGPFHKYFPASSSSLLS-----QDESCISWLDKHAPKSVIYVSFGSVV-N-IDETEFLEIAWGL 298 (460)
Q Consensus 226 ~~~~~~~~~~~~pv~~vGpl~~~~~~~~~~~~~-----~~~~l~~~l~~~~~~~vI~vs~GS~~-~-~~~~~~~~~~~al 298 (460)
...+ .....++..|..-.....-. ....+ ....+.+-+.- +++ .+++..|+.. . -+.+.+-..+..+
T Consensus 204 -~~~~--~~~~~~i~vi~ngvd~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l 277 (439)
T 3fro_A 204 -WGFF--RNFEGKITYVFNGIDCSFWN-ESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEIL 277 (439)
T ss_dssp -HHHH--GGGTTSEEECCCCCCTTTSC-GGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHHH
T ss_pred -hhhh--hhcCCceeecCCCCCchhcC-cccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHHH
Confidence 1110 00113333333212111000 00000 11112222222 233 7777788876 3 3333343344444
Q ss_pred hhC----CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHH---hhcCCCccceeec----cCchhHHHh
Q 012613 299 ANS----RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQE---VLAHPAVGGFLTH----GGWNSTLES 367 (460)
Q Consensus 299 ~~~----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~---ll~~~~~~~~I~H----GG~gs~~ea 367 (460)
.+. +.++++ ++.+.. . ....-....++.++++.+.+|+|+.+ ++..+|+ +|.- |--.++.||
T Consensus 278 ~~~~~~~~~~l~i-~G~g~~-~---~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EA 350 (439)
T 3fro_A 278 SSKKEFQEMRFII-IGKGDP-E---LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEA 350 (439)
T ss_dssp HTSGGGGGEEEEE-ECCCCH-H---HHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHH
T ss_pred HhcccCCCeEEEE-EcCCCh-h---HHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHH
Confidence 332 333333 343220 0 00001111222233345668899864 7889998 7743 334689999
Q ss_pred HhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhc-ccc-HHHHHHHHHHHHHHHHHhhcCCCC
Q 012613 368 ICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMI-ETE-GQEMRERILYSKEKAHLCLKPGGS 445 (460)
Q Consensus 368 l~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~-~~~-~~~~~~~a~~~~~~~~~~~~~~~~ 445 (460)
+++|+|+|+... ......++. |.|..++. -+.+++.++|.++++ |++ ...+.+++++..+. -+
T Consensus 351 ma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~--------~s 415 (439)
T 3fro_A 351 MCLGAIPIASAV----GGLRDIITN--ETGILVKA-GDPGELANAILKALELSRSDLSKFRENCKKRAMS--------FS 415 (439)
T ss_dssp HHTTCEEEEESS----THHHHHCCT--TTCEEECT-TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT--------SC
T ss_pred HHCCCCeEEcCC----CCcceeEEc--CceEEeCC-CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh--------Cc
Confidence 999999999753 445555544 67877776 578999999999998 633 44555555555433 56
Q ss_pred hHHHHHHHHHHHhcC
Q 012613 446 SYQSLERLIDHILSF 460 (460)
Q Consensus 446 ~~~~~~~~~~~~~~~ 460 (460)
.+..++++++.++++
T Consensus 416 ~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 416 WEKSAERYVKAYTGS 430 (439)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHH
Confidence 888999999888763
No 28
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.38 E-value=3.4e-10 Score=109.75 Aligned_cols=351 Identities=13% Similarity=0.052 Sum_probs=178.1
Q ss_pred CceEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccCcccHHHHHHHHHHh
Q 012613 14 GKRVILFPLPYQ-GHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEASTEDMVAILIALNAK 92 (460)
Q Consensus 14 ~~~Il~~~~~~~-GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (460)
+.++....+|.. |.-.-...|+++|+++||+|++++............++.+..++........ ..... +. +
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~-~~-~--- 87 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQ--YPPYD-LA-L--- 87 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CC--SCCHH-HH-H---
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccccc--ccccc-HH-H---
Confidence 456666666644 6778888999999999999999988533222222357777666521111000 00000 00 0
Q ss_pred cchhHHHHHHHhhccCCCCCCCeeEEEECCcchh--HHHHHHH-c--CCCeEEEeCccHHHHHHHHhchhhhhcCCCCCC
Q 012613 93 CVVPFWDCLVKLTSISNVQEDSFACIITDPLWYF--VHAVAND-F--KLPTIILQTSSVSAYLAFAAYPILREKCYLPIQ 167 (460)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~--~~~vA~~-l--gIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (460)
...+...++ + . +||+|++...... ...++.. + ++|+|........ .. ..
T Consensus 88 -~~~l~~~l~---~-----~-~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-----~~---------~~-- 141 (394)
T 2jjm_A 88 -ASKMAEVAQ---R-----E-NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI-----TV---------LG-- 141 (394)
T ss_dssp -HHHHHHHHH---H-----H-TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH-----HT---------TT--
T ss_pred -HHHHHHHHH---H-----c-CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc-----cc---------cC--
Confidence 011222222 2 2 8999998744322 2334443 3 5998875443110 00 00
Q ss_pred CCcccccccCCCCCCCCCCCCCcCCCCCcHHHHHHHHHhhhccccEEEEcCchhccHHHHHHhhhhcCC--CCccccccc
Q 012613 168 DSQLEARVIECPPLRVKDIPIFETGDPKNVDKVISAMVSLIKASSGIIWNSYRELEQVELTTIHHQYFS--IPVFPIGPF 245 (460)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~--~pv~~vGpl 245 (460)
........ .......++.++..+....+.- ...+. .++..++..
T Consensus 142 -------------------------~~~~~~~~---~~~~~~~ad~ii~~s~~~~~~~------~~~~~~~~~~~vi~ng 187 (394)
T 2jjm_A 142 -------------------------SDPSLNNL---IRFGIEQSDVVTAVSHSLINET------HELVKPNKDIQTVYNF 187 (394)
T ss_dssp -------------------------TCTTTHHH---HHHHHHHSSEEEESCHHHHHHH------HHHTCCSSCEEECCCC
T ss_pred -------------------------CCHHHHHH---HHHHHhhCCEEEECCHHHHHHH------HHhhCCcccEEEecCC
Confidence 00000111 1122456778888776544322 22222 244444432
Q ss_pred ccCCCCCCCCcccccccchhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhC----CCceEEEEcCCcccchhhhc
Q 012613 246 HKYFPASSSSLLSQDESCISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANS----RVPFLWVVRPGLVREAEWLE 321 (460)
Q Consensus 246 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~ 321 (460)
...... .+. ....+.+-+.. ++++.+++..|+... .+.+..+++|++.+ +.++ +.++.+.. . .
T Consensus 188 v~~~~~---~~~-~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l-~i~G~g~~-~----~ 254 (394)
T 2jjm_A 188 IDERVY---FKR-DMTQLKKEYGI-SESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKL-LLVGDGPE-F----C 254 (394)
T ss_dssp CCTTTC---CCC-CCHHHHHHTTC-C---CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEE-EEECCCTT-H----H
T ss_pred ccHHhc---CCc-chHHHHHHcCC-CCCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEE-EEECCchH-H----H
Confidence 221111 010 11112222221 123455666787753 23344445554432 3443 34443221 0 0
Q ss_pred cCchhHHH-hhcCCceeeeccCh-HHhhcCCCcccee----eccCchhHHHhHhcCCceeecccccchhhhHHHhhhhhe
Q 012613 322 LLPTGFVE-MLDGRGHIVKWAPQ-QEVLAHPAVGGFL----THGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWR 395 (460)
Q Consensus 322 ~l~~~~~~-~~~~~~~~~~~vp~-~~ll~~~~~~~~I----~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G 395 (460)
.+-.-+.+ ...+|+.+.++... .+++..+|+ +| .-|..+++.||+++|+|+|+.+.. .....+++. +
T Consensus 255 ~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~ 327 (394)
T 2jjm_A 255 TILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-D 327 (394)
T ss_dssp HHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-T
T ss_pred HHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-C
Confidence 01111100 01245577777654 469999998 88 456667999999999999998753 334455552 6
Q ss_pred eeEecCCccCHHHHHHHHHHHhcccc-HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 396 LGLHLDGNVERREIEIAVRRVMIETE-GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 396 ~G~~l~~~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
.|..++. -+.+++.++|.++++|++ ...+.+++++.. . +.-+.++.++++++.+++
T Consensus 328 ~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~---~----~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 328 TGYLCEV-GDTTGVADQAIQLLKDEELHRNMGERARESV---Y----EQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp TEEEECT-TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---H----HHSCHHHHHHHHHHHHHH
T ss_pred ceEEeCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH---H----HhCCHHHHHHHHHHHHHH
Confidence 7777665 478999999999999832 223333443333 1 345688888888888765
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.36 E-value=7.2e-12 Score=120.81 Aligned_cols=159 Identities=11% Similarity=0.094 Sum_probs=95.1
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhC-----CCceEEEEcCCcccchhhhccCchhHHHhh--cCCceeeeccCh-
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANS-----RVPFLWVVRPGLVREAEWLELLPTGFVEML--DGRGHIVKWAPQ- 343 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~vp~- 343 (460)
++++|+++.|...... .+..+++|++.+ +.++++..+.+. . +-+.+.+.. .+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~----~----~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP----V----VREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH----H----HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH----H----HHHHHHHHhccCCCEEEECCCCHH
Confidence 3467777777553221 345566666432 344444444321 0 111121111 246788866665
Q ss_pred --HHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc
Q 012613 344 --QEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE 421 (460)
Q Consensus 344 --~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~ 421 (460)
.++|..+|+ ||+++| |.+.||+++|+|+|+.+..+++... .+. |.|..+. .+++.|.++|.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~--~d~~~la~~i~~ll~d-- 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG--TDPEGVYRVVKGLLEN-- 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC--SCHHHHHHHHHHHHTC--
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC--CCHHHHHHHHHHHHhC--
Confidence 479999998 999884 5566999999999998866666552 453 8887775 3899999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHH
Q 012613 422 GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHI 457 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (460)
+..+++ +++. ......+++.++.++.+.+.+
T Consensus 335 -~~~~~~---~~~~-~~~~~~~~~~~~i~~~i~~~~ 365 (376)
T 1v4v_A 335 -PEELSR---MRKA-KNPYGDGKAGLMVARGVAWRL 365 (376)
T ss_dssp -HHHHHH---HHHS-CCSSCCSCHHHHHHHHHHHHT
T ss_pred -hHhhhh---hccc-CCCCCCChHHHHHHHHHHHHh
Confidence 443332 3321 111224455555555554443
No 30
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.36 E-value=1.6e-11 Score=118.57 Aligned_cols=162 Identities=15% Similarity=0.144 Sum_probs=99.5
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhC-----CCceEEEEcCCcccchhhhccCchhHHHhh--cCCceeeeccCh-
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANS-----RVPFLWVVRPGLVREAEWLELLPTGFVEML--DGRGHIVKWAPQ- 343 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~vp~- 343 (460)
++++++++.|+..... +.+..+++|+..+ +.++++..+.+. + +.+.+.+.. .+|+.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~----~----~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP----N----VREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH----H----HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH----H----HHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4577888888765321 3445566665432 344444333221 0 111222211 246788777765
Q ss_pred --HHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc
Q 012613 344 --QEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE 421 (460)
Q Consensus 344 --~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~ 421 (460)
.++|..+|+ ||+.+| |++.||+++|+|+|+.+..++... +.+. |.|..+.. +++.|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~--d~~~la~~i~~ll~d-- 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT--DKQRIVEEVTRLLKD-- 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS--SHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC--CHHHHHHHHHHHHhC--
Confidence 458999998 999885 458899999999999987444332 3453 88887765 899999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 422 GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
+..++ +|++..++ ..+..+.++.++.+.+.+++
T Consensus 343 -~~~~~---~~~~~~~~-~~~~~~~~~i~~~~~~~~~~ 375 (384)
T 1vgv_A 343 -ENEYQ---AMSRAHNP-YGDGQACSRILEALKNNRIS 375 (384)
T ss_dssp -HHHHH---HHHSSCCT-TCCSCHHHHHHHHHHHTCCC
T ss_pred -hHHHh---hhhhccCC-CcCCCHHHHHHHHHHHHHHh
Confidence 43332 23322221 12455666666666665543
No 31
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.36 E-value=3e-10 Score=113.83 Aligned_cols=373 Identities=12% Similarity=0.029 Sum_probs=192.6
Q ss_pred CceEEEEcCC---------------CccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCC-------CCC---CCCeEEEEc
Q 012613 14 GKRVILFPLP---------------YQGHINPMLQIASVLYSKGFSITIIHTNLNPLN-------ACN---YPHFEFHSI 68 (460)
Q Consensus 14 ~~~Il~~~~~---------------~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~-------~~~---~~gi~~~~~ 68 (460)
+|||++++.. ..|.-..+..|+++|+++||+|++++....... ... ..|++++.+
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 86 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRI 86 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEe
Confidence 5999999852 347778899999999999999999987532211 111 258888888
Q ss_pred CCCCCCCccCcccHHHHHHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcc--hhHHHHHHHcCCCeEEEeCccH
Q 012613 69 SASLSETEASTEDMVAILIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLW--YFVHAVANDFKLPTIILQTSSV 146 (460)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~lgIP~v~~~~~~~ 146 (460)
+..... ..........+..+. ..+...+++... +||+|.+.... ..+..++..+++|+|.......
T Consensus 87 ~~~~~~-~~~~~~~~~~~~~~~----~~l~~~l~~~~~-------~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~ 154 (499)
T 2r60_A 87 PFGGDK-FLPKEELWPYLHEYV----NKIINFYREEGK-------FPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLG 154 (499)
T ss_dssp CCSCSS-CCCGGGCGGGHHHHH----HHHHHHHHHHTC-------CCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCH
T ss_pred cCCCcC-CcCHHHHHHHHHHHH----HHHHHHHHhcCC-------CCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCcc
Confidence 742211 111111111111110 112222333212 79999987543 2234467788999987544432
Q ss_pred HHHHHHHhchhhhhcCCCCCCCCcccccccCCCCCCCCCCCCCcCCCCCcHH------HHHHHHHhhhccccEEEEcCch
Q 012613 147 SAYLAFAAYPILREKCYLPIQDSQLEARVIECPPLRVKDIPIFETGDPKNVD------KVISAMVSLIKASSGIIWNSYR 220 (460)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~ 220 (460)
.... ...... . ....... ............++.+++.+..
T Consensus 155 ~~~~----------~~~~~~---~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~ 200 (499)
T 2r60_A 155 AQKM----------EKLNVN---T---------------------SNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQ 200 (499)
T ss_dssp HHHH----------HTTCCC---S---------------------TTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHH
T ss_pred cccc----------hhhccC---C---------------------CCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHH
Confidence 1110 000000 0 0000000 0101112334667888887765
Q ss_pred hccHHHHHHhhhhc--CC--------CCcccccccccCCCCCCCCcccc---cccchhhhc-----cCCCCeEEEEEccC
Q 012613 221 ELEQVELTTIHHQY--FS--------IPVFPIGPFHKYFPASSSSLLSQ---DESCISWLD-----KHAPKSVIYVSFGS 282 (460)
Q Consensus 221 ~le~~~~~~~~~~~--~~--------~pv~~vGpl~~~~~~~~~~~~~~---~~~l~~~l~-----~~~~~~vI~vs~GS 282 (460)
..+. + ... ++ .++..|..-...... .+.+. ...+.+-+. . +++..+++..|+
T Consensus 201 ~~~~-----~-~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~---~~~~~~~~~~~~r~~~~~~~~~~-~~~~~~i~~vGr 270 (499)
T 2r60_A 201 ERFG-----Q-YSHDLYRGAVNVEDDDKFSVIPPGVNTRVF---DGEYGDKIKAKITKYLERDLGSE-RMELPAIIASSR 270 (499)
T ss_dssp HHHH-----T-TTSGGGTTTCCTTCGGGEEECCCCBCTTTS---SSCCCHHHHHHHHHHHHHHSCGG-GTTSCEEEECSC
T ss_pred HHHH-----H-HhhhcccccccccCCCCeEEECCCcChhhc---CccchhhhHHHHHHHhccccccc-CCCCcEEEEeec
Confidence 4332 1 222 22 123333321111100 01000 011222221 1 123455667787
Q ss_pred cccCCHHHHHHHHHHHhhCCC-----ceEEEEcCCccc--------chh--hhccCchhHHH-hhcCCceeeeccChH--
Q 012613 283 VVNIDETEFLEIAWGLANSRV-----PFLWVVRPGLVR--------EAE--WLELLPTGFVE-MLDGRGHIVKWAPQQ-- 344 (460)
Q Consensus 283 ~~~~~~~~~~~~~~al~~~~~-----~~i~~~~~~~~~--------~~~--~~~~l~~~~~~-~~~~~~~~~~~vp~~-- 344 (460)
.. ..+.+..+++|++.+.. ..++.+++.... +.+ ....+-..+.+ ...+++.+.+++|+.
T Consensus 271 l~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~ 348 (499)
T 2r60_A 271 LD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQEL 348 (499)
T ss_dssp CC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHH
T ss_pred Cc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHH
Confidence 65 34556667777776531 235555542100 000 00011111111 123567899999865
Q ss_pred -HhhcCC----Cccceeecc---C-chhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHH
Q 012613 345 -EVLAHP----AVGGFLTHG---G-WNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRR 415 (460)
Q Consensus 345 -~ll~~~----~~~~~I~HG---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~ 415 (460)
+++..+ |+ +|.-. | -.++.||+++|+|+|+... ......+.+. ..|..++. -+.+++.++|.+
T Consensus 349 ~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~-~d~~~la~~i~~ 420 (499)
T 2r60_A 349 AGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP-EDPEDIARGLLK 420 (499)
T ss_dssp HHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT-TCHHHHHHHHHH
T ss_pred HHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC-CCHHHHHHHHHH
Confidence 488888 88 77432 3 4589999999999999864 4456666663 57877766 578999999999
Q ss_pred Hhcccc-HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 416 VMIETE-GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 416 vl~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
+++|++ ...+.+++++..+ +.-+.++.++++++.+++
T Consensus 421 ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~y~~ 458 (499)
T 2r60_A 421 AFESEETWSAYQEKGKQRVE-------ERYTWQETARGYLEVIQE 458 (499)
T ss_dssp HHSCHHHHHHHHHHHHHHHH-------HHSBHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHH
Confidence 999832 2233333333322 334577777777777654
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.36 E-value=1.5e-10 Score=112.61 Aligned_cols=113 Identities=8% Similarity=0.078 Sum_probs=80.9
Q ss_pred cCCceeeeccChH---HhhcCCCccceeec----cCc-hhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCc
Q 012613 332 DGRGHIVKWAPQQ---EVLAHPAVGGFLTH----GGW-NSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGN 403 (460)
Q Consensus 332 ~~~~~~~~~vp~~---~ll~~~~~~~~I~H----GG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 403 (460)
.+|+.+.+++|+. +++..+++ +|.- .|. .++.||+++|+|+|+.+. ......+.+ .+.|..++.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLAD-GDAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTT-TTSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcC-CCceEEeCC-
Confidence 3566889999975 68999998 7744 343 489999999999999865 556677777 377877765
Q ss_pred cCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 404 VERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 404 ~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
-+.+++.++|.++++| +..++ ++++..++..+ ..+.++.++.+.+.+++
T Consensus 334 ~d~~~l~~~i~~l~~~---~~~~~---~~~~~~~~~~~-~~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 334 DDADGMAAALIGILED---DQLRA---GYVARASERVH-RYDWSVVSAQIMRVYET 382 (406)
T ss_dssp TCHHHHHHHHHHHHHC---HHHHH---HHHHHHHHHGG-GGBHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHH---HHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 4789999999999998 33322 22233333233 45678888888877754
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.34 E-value=5.9e-12 Score=122.04 Aligned_cols=158 Identities=11% Similarity=0.090 Sum_probs=94.5
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhC-----CCceEEEEcCCcccchhhhccCchhHHHh--hcCCceeeeccCh-
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANS-----RVPFLWVVRPGLVREAEWLELLPTGFVEM--LDGRGHIVKWAPQ- 343 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~vp~- 343 (460)
++++|+++.+-...... .+..+++|++.+ +.++++.++.+. + +-+.+.+. ...|+.+.+++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~----~----~~~~l~~~~~~~~~v~~~~~lg~~ 299 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP----N----VREPVNKLLKGVSNIVLIEPQQYL 299 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH----H----HHHHHHHHTTTCTTEEEECCCCHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh----H----HHHHHHHHHcCCCCEEEeCCCCHH
Confidence 46777777532222122 245666666543 445555544321 0 11122221 1246788777753
Q ss_pred --HHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc
Q 012613 344 --QEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE 421 (460)
Q Consensus 344 --~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~ 421 (460)
..++..+++ +|+-+| |.+.||...|+|+|+..-..+++ . +.+. |.++.+.. +++.|.+++.++++|
T Consensus 300 ~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~---e-~v~~-G~~~lv~~--d~~~l~~ai~~ll~d-- 367 (396)
T 3dzc_A 300 PFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP---E-AVAA-GTVKLVGT--NQQQICDALSLLLTD-- 367 (396)
T ss_dssp HHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH---H-HHHH-TSEEECTT--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch---H-HHHc-CceEEcCC--CHHHHHHHHHHHHcC--
Confidence 468999998 999988 66689999999999975444543 2 3453 87755543 689999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 422 GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
+..++ +|++... ..+...+.+++++.|+|
T Consensus 368 -~~~~~---~m~~~~~-----~~~~~~aa~ri~~~l~~ 396 (396)
T 3dzc_A 368 -PQAYQ---AMSQAHN-----PYGDGKACQRIADILAK 396 (396)
T ss_dssp -HHHHH---HHHTSCC-----TTCCSCHHHHHHHHHHC
T ss_pred -HHHHH---HHhhccC-----CCcCChHHHHHHHHHhC
Confidence 44333 2332221 22344566666666654
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.33 E-value=2.2e-11 Score=118.15 Aligned_cols=160 Identities=10% Similarity=0.100 Sum_probs=95.6
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhh-----CCCceEEEEcCCcccchhhhccCchhHHHh--hcCCceeeeccCh-
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLAN-----SRVPFLWVVRPGLVREAEWLELLPTGFVEM--LDGRGHIVKWAPQ- 343 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~vp~- 343 (460)
++++++++.|...... +.+..+++|+.. .+.++++..+.+. . +-+.+.+. ...|+.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~----~----~~~~l~~~~~~~~~v~l~~~l~~~ 293 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP----A----VREKAMAILGGHERIHLIEPLDAI 293 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH----H----HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH----H----HHHHHHHHhCCCCCEEEeCCCCHH
Confidence 4577877766432211 124555555543 2345555544321 0 11112111 1256788888874
Q ss_pred --HHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc
Q 012613 344 --QEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE 421 (460)
Q Consensus 344 --~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~ 421 (460)
..++..+++ +|+.+|. .+.||...|+|+|++|-.++++. +.+. |.|+.+.. +++.|.+++.++++|
T Consensus 294 ~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~--d~~~l~~ai~~ll~~-- 361 (403)
T 3ot5_A 294 DFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT--NKENLIKEALDLLDN-- 361 (403)
T ss_dssp HHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC--CHHHHHHHHHHHHcC--
Confidence 458999998 9988753 33799999999999976666654 2353 88876654 899999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHH
Q 012613 422 GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHI 457 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (460)
+..+++. ++..+ ....++++++.++.+.+.+
T Consensus 362 -~~~~~~m---~~~~~-~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 362 -KESHDKM---AQAAN-PYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp -HHHHHHH---HHSCC-TTCCSCHHHHHHHHHHHHH
T ss_pred -HHHHHHH---HhhcC-cccCCcHHHHHHHHHHHHh
Confidence 4444332 22211 1225555566555555544
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.31 E-value=1.1e-10 Score=110.81 Aligned_cols=151 Identities=12% Similarity=0.041 Sum_probs=96.0
Q ss_pred EEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChH---HhhcCCCc
Q 012613 276 IYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQ---EVLAHPAV 352 (460)
Q Consensus 276 I~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~---~ll~~~~~ 352 (460)
+++..|+.. ..+....++++++..+.+++++-.+.. . + .+ ..+.++..+|+.+.+|+|+. +++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~--~-~---~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWE--P-E---YF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCC--H-H---HH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCccc--H-H---HH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 344567765 345566777888777777665533221 0 1 11 11222334788999999976 68999998
Q ss_pred cceeec-------------cC-chhHHHhHhcCCceeecccccchhhhHHHhhh--hheeeEecCCccCHHHHHHHHHHH
Q 012613 353 GGFLTH-------------GG-WNSTLESICEGVPMICQPYLGDQMVNARYISH--VWRLGLHLDGNVERREIEIAVRRV 416 (460)
Q Consensus 353 ~~~I~H-------------GG-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~~G~G~~l~~~~~~~~l~~ai~~v 416 (460)
+|.- -| -.++.||+++|+|+|+... ..+...+++ . +.|..++. +.+++.++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~--d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF--APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC--CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC--CHHHHHHHHHHH
Confidence 7732 23 4579999999999999875 346666666 4 56655544 999999999999
Q ss_pred hccccHHHHHHHHHHHH-HHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 417 MIETEGQEMRERILYSK-EKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 417 l~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
++ .+++++.. +.+ +.++.++++++.+++
T Consensus 306 ~~-------~~~~~~~~~~~~--------s~~~~~~~~~~~~~~ 334 (342)
T 2iuy_A 306 PA-------SDEVRRAAVRLW--------GHVTIAERYVEQYRR 334 (342)
T ss_dssp CC-------HHHHHHHHHHHH--------BHHHHHHHHHHHHHH
T ss_pred HH-------HHHHHHHHHHhc--------CHHHHHHHHHHHHHH
Confidence 87 22333222 222 356666666666543
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.30 E-value=5.1e-11 Score=114.56 Aligned_cols=165 Identities=16% Similarity=0.174 Sum_probs=102.4
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCC----c-eEEEEcCCcccchhhhccCchhHHH-hhcCCceeeeccCh-H
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRV----P-FLWVVRPGLVREAEWLELLPTGFVE-MLDGRGHIVKWAPQ-Q 344 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~vp~-~ 344 (460)
+++.+++..|+... .+....++++++.... . -++.++.+.. + .+..-+.+ ...+|+.+.++... .
T Consensus 194 ~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~---~~~~~~~~~~~~~~v~~~g~~~~~~ 265 (374)
T 2iw1_A 194 EQQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP---R---KFEALAEKLGVRSNVHFFSGRNDVS 265 (374)
T ss_dssp TTCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---H---HHHHHHHHHTCGGGEEEESCCSCHH
T ss_pred CCCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---H---HHHHHHHHcCCCCcEEECCCcccHH
Confidence 34567777787653 3456667777776532 2 3444444321 0 01111111 11246688887654 4
Q ss_pred HhhcCCCccceee----ccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhccc
Q 012613 345 EVLAHPAVGGFLT----HGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIET 420 (460)
Q Consensus 345 ~ll~~~~~~~~I~----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 420 (460)
+++..+++ +|. -|.-+++.||+++|+|+|+... ..+...+++. +.|..+...-+.+++.++|.++++|+
T Consensus 266 ~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 266 ELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp HHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHHHCH
T ss_pred HHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHHHHcCh
Confidence 59999998 776 4567789999999999999765 3456778874 88988873358999999999999983
Q ss_pred c-HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 421 E-GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 421 ~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
+ ...+.+++++..++. +.....+.+.+.+++
T Consensus 339 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 339 PLRMAWAENARHYADTQ--------DLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHHHHHHHHHHHHHS--------CCSCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHH
Confidence 2 233444444444332 344455555555554
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.29 E-value=7.4e-11 Score=113.52 Aligned_cols=161 Identities=13% Similarity=0.138 Sum_probs=97.7
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhC-----CCceEEEEcCCcccchhhhccCchhHHHhhc--CCceeeeccChH
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANS-----RVPFLWVVRPGLVREAEWLELLPTGFVEMLD--GRGHIVKWAPQQ 344 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~vp~~ 344 (460)
++++++++.|...... +.+..+++|++.+ +.+++ ++..... + +-+.+.+... +|+.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i--~~~g~~~--~----~~~~~~~~~~~~~~v~~~g~~~~~ 274 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVV--YPVHMNP--V----VRETANDILGDYGRIHLIEPLDVI 274 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEE--EECCSCH--H----HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEE--EeCCCCH--H----HHHHHHHHhhccCCEEEeCCCCHH
Confidence 4567777888654321 3456666776542 33433 3322100 0 1122222222 577887777754
Q ss_pred ---HhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc
Q 012613 345 ---EVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE 421 (460)
Q Consensus 345 ---~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~ 421 (460)
.++..+|+ +|+.+| +++.||+++|+|+|+....+.. .. +.+. |.|..+.. +++++.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e-~v~~-g~g~~v~~--d~~~la~~i~~ll~~-- 342 (375)
T 3beo_A 275 DFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PE-GIEA-GTLKLAGT--DEETIFSLADELLSD-- 342 (375)
T ss_dssp HHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HH-HHHT-TSEEECCS--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ce-eecC-CceEEcCC--CHHHHHHHHHHHHhC--
Confidence 58899998 998874 5688999999999998543333 22 3443 78877764 889999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHh
Q 012613 422 GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHIL 458 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
+..++ ++++..++- .+..+.++.++.+.+.++
T Consensus 343 -~~~~~---~~~~~~~~~-~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 343 -KEAHD---KMSKASNPY-GDGRASERIVEAILKHFN 374 (375)
T ss_dssp -HHHHH---HHCCCCCTT-CCSCHHHHHHHHHHHHTT
T ss_pred -hHhHh---hhhhcCCCC-CCCcHHHHHHHHHHHHhh
Confidence 44333 233222221 145667777777776654
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.23 E-value=9.3e-10 Score=107.45 Aligned_cols=111 Identities=15% Similarity=0.070 Sum_probs=79.8
Q ss_pred CCceeeeccC---h---HHhhcCCCccceeecc----CchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCC
Q 012613 333 GRGHIVKWAP---Q---QEVLAHPAVGGFLTHG----GWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDG 402 (460)
Q Consensus 333 ~~~~~~~~vp---~---~~ll~~~~~~~~I~HG----G~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~ 402 (460)
+++.+.+|++ + .+++..+|+ +|.-. .-.++.||+++|+|+|+.+. ..+...+++. +.|..++
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~- 364 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR- 364 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES-
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC-
Confidence 5778888776 2 348888998 77654 45689999999999999764 4566777773 6787776
Q ss_pred ccCHHHHHHHHHHHhcccc-HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhcC
Q 012613 403 NVERREIEIAVRRVMIETE-GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILSF 460 (460)
Q Consensus 403 ~~~~~~l~~ai~~vl~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (460)
+.+++.++|.++++|++ ...+.+++++.. + +.-+.++.++++++.++++
T Consensus 365 --d~~~la~~i~~ll~~~~~~~~~~~~a~~~~---~----~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 --DANEAVEVVLYLLKHPEVSKEMGAKAKERV---R----KNFIITKHMERYLDILNSL 414 (416)
T ss_dssp --SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---H----HHTBHHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH---H----HHcCHHHHHHHHHHHHHHh
Confidence 88999999999999832 222333333322 2 3456888899998888764
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.95 E-value=4.4e-08 Score=102.13 Aligned_cols=170 Identities=12% Similarity=0.076 Sum_probs=97.7
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCC-----CceEEEEcCCcc--cch---hhhccCchhHHH-hhcCCceeee--
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSR-----VPFLWVVRPGLV--REA---EWLELLPTGFVE-MLDGRGHIVK-- 339 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~--~~~---~~~~~l~~~~~~-~~~~~~~~~~-- 339 (460)
++.+++..|... ..+.+..+++|+.... .+++++-++... ... +....+-.-+.+ ...+++.+.+
T Consensus 571 ~~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 571 KKPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp TSCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CCeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 456667778875 3455666777776542 344444332210 000 000111111111 1125667776
Q ss_pred --ccChHHhhc----CCCccceeec----cCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHH
Q 012613 340 --WAPQQEVLA----HPAVGGFLTH----GGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREI 409 (460)
Q Consensus 340 --~vp~~~ll~----~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l 409 (460)
++|+.++.. .+++ +|.- |--.++.||+++|+|+|+. |-......+.+. +.|..++. -+++.+
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-~D~e~L 720 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-YHGDQA 720 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-TSHHHH
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-CCHHHH
Confidence 445555544 5677 7753 3345899999999999996 445566777773 67887776 578889
Q ss_pred HHHHHHHh----cccc-HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 410 EIAVRRVM----IETE-GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 410 ~~ai~~vl----~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
.++|.+++ .|++ ...+.+++++. + .+..+.+..++++++.+++
T Consensus 721 A~aI~~lL~~Ll~d~~~~~~m~~~ar~~---a----~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 721 ADTLADFFTKCKEDPSHWDEISKGGLQR---I----EEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp HHHHHHHHHHHHHCTHHHHHHHHHHHHH---H----HHSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHH---H----HHhCCHHHHHHHHHHHHHH
Confidence 99997776 6632 22333333332 2 2456788888888887654
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.90 E-value=3.3e-09 Score=101.97 Aligned_cols=161 Identities=14% Similarity=0.093 Sum_probs=95.4
Q ss_pred CeEEEEEccCcccCC-HHHHHHHHHHHhhC----CCceEEEEcCCcccchhhhccCchh-HHHhhcCCceeeeccCh---
Q 012613 273 KSVIYVSFGSVVNID-ETEFLEIAWGLANS----RVPFLWVVRPGLVREAEWLELLPTG-FVEMLDGRGHIVKWAPQ--- 343 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~vp~--- 343 (460)
++.++++.|...... .+.+..+++|+... +..+++...... .+...... + + ....|+.+.+.+++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~---~~~l~~~~-~~~--~~~~~v~l~~~lg~~~~ 276 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT---KKRLEDLE-GFK--ELGDKIRFLPAFSFTDY 276 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH---HHHHHTSG-GGG--GTGGGEEECCCCCHHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH---HHHHHHHH-HHh--cCCCCEEEEcCCCHHHH
Confidence 578888887654322 24566677777543 456666543210 00011110 0 0 01235577665554
Q ss_pred HHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc-H
Q 012613 344 QEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE-G 422 (460)
Q Consensus 344 ~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~-~ 422 (460)
..+++++++ +|+-+|. .+.||...|+|+|+++-..+.+. ..+. |.++.+.. +++.|.+++.++++|+. .
T Consensus 277 ~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~~--d~~~i~~ai~~ll~d~~~~ 346 (385)
T 4hwg_A 277 VKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSGF--KAERVLQAVKTITEEHDNN 346 (385)
T ss_dssp HHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECCS--SHHHHHHHHHHHHTTCBTT
T ss_pred HHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcCC--CHHHHHHHHHHHHhChHHH
Confidence 469999998 9999875 46999999999999987554222 2453 87766543 79999999999998843 1
Q ss_pred HHHHHHHHHHHHHH-HHhhcCCCChHHHHHHHHHHH
Q 012613 423 QEMRERILYSKEKA-HLCLKPGGSSYQSLERLIDHI 457 (460)
Q Consensus 423 ~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 457 (460)
..+++++. .+ . .++++++.++.+.+.+
T Consensus 347 ~~m~~~~~----~~~g----~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 347 KRTQGLVP----DYNE----AGLVSKKILRIVLSYV 374 (385)
T ss_dssp BCCSCCCH----HHHT----CCCHHHHHHHHHHHHH
T ss_pred HHhhccCC----CCCC----CChHHHHHHHHHHHHh
Confidence 11222221 22 3 6666666666665544
No 41
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.86 E-value=6.5e-07 Score=87.03 Aligned_cols=166 Identities=11% Similarity=0.047 Sum_probs=97.5
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhh-----CCCceEEEEcCCcccchhhhccCchhHHH---h--hcCC-------c
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLAN-----SRVPFLWVVRPGLVREAEWLELLPTGFVE---M--LDGR-------G 335 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~---~--~~~~-------~ 335 (460)
+..+++..|+... .+.+..+++|+.. .+.+++++-.+...... .+.+.+.+ + ..++ +
T Consensus 183 ~~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~----~l~~~~~~~~~~~~l~~~v~~l~~vv 256 (413)
T 3oy2_A 183 DDVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKF----DLHSIALRELVASGVDNVFTHLNKIM 256 (413)
T ss_dssp TSEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSC----CHHHHHHHHHHHHTCSCHHHHHTTEE
T ss_pred CceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchh----hHHHHHHHHHHHcCccccccccccee
Confidence 4677778888653 3344445555543 24566665444321110 00011111 1 1122 4
Q ss_pred eeeeccChH---HhhcCCCccceeec----cCchhHHHhHhcCCceeecccccchhhhHHHhhhhhee------------
Q 012613 336 HIVKWAPQQ---EVLAHPAVGGFLTH----GGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRL------------ 396 (460)
Q Consensus 336 ~~~~~vp~~---~ll~~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~------------ 396 (460)
.+.+|+|+. +++..+++ +|.- |.-.++.||+++|+|+|+... ......+.+. ..
T Consensus 257 ~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 257 INRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISVD 329 (413)
T ss_dssp EECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEECT
T ss_pred eccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-cccccccccccccc
Confidence 556999854 37889998 7742 334589999999999999654 3444555441 21
Q ss_pred ---eE--ecCCccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 397 ---GL--HLDGNVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 397 ---G~--~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
|. .+.. -+.+++.++| ++++| +..+ +++++..++.+.+.-+.++.++++++.+++
T Consensus 330 ~~~G~~gl~~~-~d~~~la~~i-~l~~~---~~~~---~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 330 DRDGIGGIEGI-IDVDDLVEAF-TFFKD---EKNR---KEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp TTCSSCCEEEE-CCHHHHHHHH-HHTTS---HHHH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred cccCcceeeCC-CCHHHHHHHH-HHhcC---HHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44 3333 4899999999 99998 4332 233333333333667899999999888765
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.84 E-value=3e-07 Score=91.50 Aligned_cols=161 Identities=10% Similarity=-0.013 Sum_probs=97.1
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhh---CCCceEEEEcCCcccchhhhccCchhHHHhhcCCce-eeeccChH---Hh
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLAN---SRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGH-IVKWAPQQ---EV 346 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~vp~~---~l 346 (460)
..+++..|+... .+.+..+++|++. .+.+++++-.+.. .....+ ....++..+|+. +.++ +.. ++
T Consensus 291 ~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~----~~~~~l-~~~~~~~~~~v~~~~g~-~~~~~~~~ 362 (485)
T 1rzu_A 291 SPLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGDV----ALEGAL-LAAASRHHGRVGVAIGY-NEPLSHLM 362 (485)
T ss_dssp SCEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBCH----HHHHHH-HHHHHHTTTTEEEEESC-CHHHHHHH
T ss_pred CeEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCch----HHHHHH-HHHHHhCCCcEEEecCC-CHHHHHHH
Confidence 346777788763 2334444444443 3556555543321 000111 111222335666 5677 543 58
Q ss_pred hcCCCccceeec----cCchhHHHhHhcCCceeecccccchhhhHHHhhhhh---------eeeEecCCccCHHHHHHHH
Q 012613 347 LAHPAVGGFLTH----GGWNSTLESICEGVPMICQPYLGDQMVNARYISHVW---------RLGLHLDGNVERREIEIAV 413 (460)
Q Consensus 347 l~~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~l~~ai 413 (460)
+..+|+ +|.- |.-.++.||+++|+|+|+... ......+.+ - +.|..++. -+.+++.++|
T Consensus 363 ~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~i 434 (485)
T 1rzu_A 363 QAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-VTLDGLKQAI 434 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-CSHHHHHHHH
T ss_pred HhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-CCHHHHHHHH
Confidence 999998 7743 334589999999999999764 345555554 3 47777665 5789999999
Q ss_pred HHHh---ccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 414 RRVM---IETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 414 ~~vl---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
.+++ +| +..++ ++++..++ +.-+.++.++++++.+++
T Consensus 435 ~~ll~~~~~---~~~~~---~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 435 RRTVRYYHD---PKLWT---QMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHHHTC---HHHHH---HHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHhCC---HHHHH---HHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 9999 67 33332 23333222 567888888888888764
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.80 E-value=3.2e-07 Score=91.30 Aligned_cols=162 Identities=10% Similarity=0.031 Sum_probs=96.6
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhh---CCCceEEEEcCCcccchhhhccCchhHHHhhcCCce-eeeccChH---H
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLAN---SRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGH-IVKWAPQQ---E 345 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~vp~~---~ 345 (460)
+..+++..|.... .+.+..+++|++. .+.+++++-.+.. +....+- ...++..+++. +.++ +.. .
T Consensus 291 ~~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~----~~~~~l~-~~~~~~~~~v~~~~g~-~~~~~~~ 362 (485)
T 2qzs_A 291 KVPLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDP----VLQEGFL-AAAAEYPGQVGVQIGY-HEAFSHR 362 (485)
T ss_dssp TSCEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECH----HHHHHHH-HHHHHSTTTEEEEESC-CHHHHHH
T ss_pred CCeEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCch----HHHHHHH-HHHHhCCCcEEEeCCC-CHHHHHH
Confidence 3456666777653 3334445555543 3555555543221 0001111 11122235665 5677 543 5
Q ss_pred hhcCCCccceeec----cCchhHHHhHhcCCceeecccccchhhhHHHhhhhh---------eeeEecCCccCHHHHHHH
Q 012613 346 VLAHPAVGGFLTH----GGWNSTLESICEGVPMICQPYLGDQMVNARYISHVW---------RLGLHLDGNVERREIEIA 412 (460)
Q Consensus 346 ll~~~~~~~~I~H----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~l~~a 412 (460)
++..+|+ +|.- |.-.++.||+++|+|+|+... ......+.+ - +.|..++. -+.+++.++
T Consensus 363 ~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~ 434 (485)
T 2qzs_A 363 IMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-SNAWSLLRA 434 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-SSHHHHHHH
T ss_pred HHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-CCHHHHHHH
Confidence 8999998 7743 334578899999999999864 345555554 2 46776665 578999999
Q ss_pred HHHHh---ccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 413 VRRVM---IETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 413 i~~vl---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
|.+++ +| +..++ ++++..++ +.-+.++.++++++.+++
T Consensus 435 i~~ll~~~~~---~~~~~---~~~~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 435 IRRAFVLWSR---PSLWR---FVQRQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp HHHHHHHHTS---HHHHH---HHHHHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCC---HHHHH---HHHHHHHh---hcCCHHHHHHHHHHHHHH
Confidence 99999 56 33332 22222222 567888999999888764
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.72 E-value=1.1e-06 Score=85.31 Aligned_cols=74 Identities=8% Similarity=0.024 Sum_probs=57.1
Q ss_pred CCceeeeccChHH---hhcCCCccceee---ccC-chhHHHhH-------hcCCceeecccccchhhhHHHhhhhheeeE
Q 012613 333 GRGHIVKWAPQQE---VLAHPAVGGFLT---HGG-WNSTLESI-------CEGVPMICQPYLGDQMVNARYISHVWRLGL 398 (460)
Q Consensus 333 ~~~~~~~~vp~~~---ll~~~~~~~~I~---HGG-~gs~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~ 398 (460)
+|+.+.+++|+.+ ++..+|+ +|. +.| -+++.||+ ++|+|+|+... +.+. ..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 4558999999754 7889998 764 334 45688999 99999999865 5553 5676
Q ss_pred e-cCCccCHHHHHHHHHHHhccc
Q 012613 399 H-LDGNVERREIEIAVRRVMIET 420 (460)
Q Consensus 399 ~-l~~~~~~~~l~~ai~~vl~~~ 420 (460)
. +.. -+.+++.++|.++++|+
T Consensus 332 l~v~~-~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 332 FGYTP-GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEECT-TCHHHHHHHHHHHHHCC
T ss_pred EEeCC-CCHHHHHHHHHHHHhCc
Confidence 6 555 47899999999999883
No 45
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.61 E-value=1.3e-05 Score=81.28 Aligned_cols=116 Identities=9% Similarity=0.013 Sum_probs=77.5
Q ss_pred CCceeeeccChH---HhhcCCCccceee---ccCchhHHHhHhcCCceeecccccchhh-hHHHhhhhheeeEecCCccC
Q 012613 333 GRGHIVKWAPQQ---EVLAHPAVGGFLT---HGGWNSTLESICEGVPMICQPYLGDQMV-NARYISHVWRLGLHLDGNVE 405 (460)
Q Consensus 333 ~~~~~~~~vp~~---~ll~~~~~~~~I~---HGG~gs~~eal~~GvP~v~~P~~~DQ~~-na~~v~~~~G~G~~l~~~~~ 405 (460)
+++.+.+++|+. +++..+|+ ||. .|+-.++.||+++|+|+|++|-..=... -+..+.. .|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 456889999854 47889998 762 2666789999999999999874311111 1344455 366544433 8
Q ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhh--cCCCChHHHHHHHHHHHhc
Q 012613 406 RREIEIAVRRVMIETEGQEMRERILYSKEKAHLCL--KPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 406 ~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 459 (460)
.+.+.+++.++++| +..++ ++++..++.+ .+..+.++.++.+++.+++
T Consensus 509 ~~~la~~i~~l~~~---~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 509 DAAFVAKAVALASD---PAALT---ALHARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp HHHHHHHHHHHHHC---HHHHH---HHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---HHHHH---HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 89999999999998 43332 2333333332 3567788888888877754
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.56 E-value=1.2e-05 Score=76.99 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=70.9
Q ss_pred ceeeeccCh-HHhhcCCCccceeec-----cCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHH
Q 012613 335 GHIVKWAPQ-QEVLAHPAVGGFLTH-----GGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERRE 408 (460)
Q Consensus 335 ~~~~~~vp~-~~ll~~~~~~~~I~H-----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 408 (460)
+.+.++... ..++..+|+ ++.- +|..++.||+++|+|+|+-|-.++.......+.+. |.++... ++++
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~---d~~~ 335 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK---NETE 335 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC---SHHH
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC---CHHH
Confidence 455555443 458989887 6642 23478999999999999877767767766666663 8776652 6789
Q ss_pred HHHHHHHHhcccc-HHHHHHHHHHHHHHHH
Q 012613 409 IEIAVRRVMIETE-GQEMRERILYSKEKAH 437 (460)
Q Consensus 409 l~~ai~~vl~~~~-~~~~~~~a~~~~~~~~ 437 (460)
|.++|.++++| + ...|.+++++..+.-.
T Consensus 336 La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 336 LVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 99999999988 5 5678888888776654
No 47
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.53 E-value=3.6e-07 Score=77.65 Aligned_cols=133 Identities=11% Similarity=0.059 Sum_probs=88.3
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhC-CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccCh---HHhhcC
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANS-RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQ---QEVLAH 349 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~---~~ll~~ 349 (460)
..+++..|+.. ..+.+..++++++.. +.+++++-.+...+. ...+........++|+.+.+|+|+ ..++..
T Consensus 23 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~---l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 23 GDFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKGDH---AERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp CSCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTTST---HHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CCEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCccHHH---HHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 34455677765 345567788888877 455555433221100 111111111123457899999997 458999
Q ss_pred CCccceee---ccCc-hhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhccc
Q 012613 350 PAVGGFLT---HGGW-NSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIET 420 (460)
Q Consensus 350 ~~~~~~I~---HGG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~ 420 (460)
+++ +|. +.|. .++.||+++|+|+|+... ..+...+++ .+.|..+ . -+.+++.++|.++++|.
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~-~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV-N-ADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE-C-SCHHHHHHHHHHHHHCT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe-C-CCHHHHHHHHHHHHhCH
Confidence 998 776 3344 499999999999999753 566777776 3788777 3 68999999999999883
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.96 E-value=0.00016 Score=75.14 Aligned_cols=175 Identities=18% Similarity=0.138 Sum_probs=107.0
Q ss_pred CCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHH--hhcCCceeeeccChHH---
Q 012613 271 APKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVE--MLDGRGHIVKWAPQQE--- 345 (460)
Q Consensus 271 ~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~vp~~~--- 345 (460)
+++.+||.+|.+....++..+....+.|++.+.-.+|....+...... +-..+.+ -.++++.+.+..|..+
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~----l~~~~~~~gi~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPN----IQQYAQNMGLPQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHH----HHHHHHHTTCCGGGEEEEECCCHHHHHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----HHHHHHhcCCCcCeEEECCCCCHHHHHH
Confidence 456799999998888999999999999999888888887655421110 1111110 0124567778888554
Q ss_pred hhcCCCccceee---ccCchhHHHhHhcCCceeecccccchhhh-HHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc
Q 012613 346 VLAHPAVGGFLT---HGGWNSTLESICEGVPMICQPYLGDQMVN-ARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE 421 (460)
Q Consensus 346 ll~~~~~~~~I~---HGG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~ 421 (460)
.+..+|+ ++. .+|.+|++|||+.|||+|.++-..=--.. +..+.. +|+.-.+. -+.++-.+.--++-+|
T Consensus 596 ~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia--~~~~~Y~~~a~~la~d-- 668 (723)
T 4gyw_A 596 RGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA--KNRQEYEDIAVKLGTD-- 668 (723)
T ss_dssp HGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC--SSHHHHHHHHHHHHHC--
T ss_pred HhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc--CCHHHHHHHHHHHhcC--
Confidence 5566776 765 78899999999999999999942211223 334444 56654333 3555555555566666
Q ss_pred HHHHHHH-HHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 422 GQEMRER-ILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 422 ~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
....+. -+++++.+..+ ......+.+.++++.+++
T Consensus 669 -~~~l~~lr~~l~~~~~~s--~l~d~~~~~~~le~a~~~ 704 (723)
T 4gyw_A 669 -LEYLKKVRGKVWKQRISS--PLFNTKQYTMELERLYLQ 704 (723)
T ss_dssp -HHHHHHHHHHHHHHHHHS--STTCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHhC--cCcCHHHHHHHHHHHHHH
Confidence 222222 22333443321 234556666666666653
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.90 E-value=9.7e-05 Score=61.44 Aligned_cols=145 Identities=14% Similarity=0.189 Sum_probs=84.7
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhCCC--ce-EEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChH---Hhh
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANSRV--PF-LWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQ---EVL 347 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~~~--~~-i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~---~ll 347 (460)
+++++..|+... .+.+..++++++.+.. .+ ++.++.+. .. ..+.. ..++...++.+ +|+|+. .++
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-~~----~~~~~-~~~~~~~~v~~-g~~~~~~~~~~~ 72 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP-DE----KKIKL-LAQKLGVKAEF-GFVNSNELLEIL 72 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST-TH----HHHHH-HHHHHTCEEEC-CCCCHHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc-cH----HHHHH-HHHHcCCeEEE-eecCHHHHHHHH
Confidence 567778888753 4556677777776531 22 33334321 00 11111 11222235677 999865 488
Q ss_pred cCCCccceeec----cCchhHHHhHhcCC-ceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcccc-
Q 012613 348 AHPAVGGFLTH----GGWNSTLESICEGV-PMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETE- 421 (460)
Q Consensus 348 ~~~~~~~~I~H----GG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~- 421 (460)
..+++ +|.- |.-.++.||+++|+ |+|+..-. ......+.+. +. .+. .-+.+++.++|.++++|++
T Consensus 73 ~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~~-~~--~~~-~~~~~~l~~~i~~l~~~~~~ 143 (166)
T 3qhp_A 73 KTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALDE-RS--LFE-PNNAKDLSAKIDWWLENKLE 143 (166)
T ss_dssp TTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSSG-GG--EEC-TTCHHHHHHHHHHHHHCHHH
T ss_pred HhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccCC-ce--EEc-CCCHHHHHHHHHHHHhCHHH
Confidence 89998 7752 33459999999996 99994321 1222233332 33 222 2588999999999999843
Q ss_pred HHHHHHHHHHHHHHH
Q 012613 422 GQEMRERILYSKEKA 436 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~ 436 (460)
...+.+++++..+.+
T Consensus 144 ~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 144 RERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC
Confidence 344555555555443
No 50
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.85 E-value=0.00035 Score=65.86 Aligned_cols=103 Identities=9% Similarity=0.017 Sum_probs=66.9
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCe-EEEEcCCCCCCCccCcccHHHHHHHHHH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSK--GFSITIIHTNLNPLNACNYPHF-EFHSISASLSETEASTEDMVAILIALNA 91 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~gi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (460)
|||+++.....|++.-..++.++|+++ +.+|++++.+.........+.+ +++.++.. .. ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--~~---~~----------- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--HG---AL----------- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-----------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--cc---cc-----------
Confidence 689999999889999999999999987 9999999987444333333455 34444311 00 00
Q ss_pred hcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEE
Q 012613 92 KCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTII 140 (460)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~ 140 (460)
....+..+.+.+++ . +||++|.-....-...++...|+|...
T Consensus 65 -~~~~~~~l~~~l~~-----~-~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 -EIGERRKLGHSLRE-----K-RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -CHHHHHHHHHHTTT-----T-TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -chHHHHHHHHHHHh-----c-CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 00122345566655 4 899999433334455678888999744
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.78 E-value=0.0006 Score=64.32 Aligned_cols=107 Identities=11% Similarity=0.013 Sum_probs=75.7
Q ss_pred CCCCceEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCeE-EEEcCCCCCCCccCcccHHHHHH
Q 012613 11 PRNGKRVILFPLPYQGHINPMLQIASVLYSK--GFSITIIHTNLNPLNACNYPHFE-FHSISASLSETEASTEDMVAILI 87 (460)
Q Consensus 11 ~~~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~gi~-~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
..+.+||+++-..+.|++.-+.++.++|+++ +.+|++++.+.........+.+. ++.++.. .....+.
T Consensus 5 ~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~---------~~~~~~~ 75 (349)
T 3tov_A 5 ELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKK---------GRHNSIS 75 (349)
T ss_dssp CCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCS---------SHHHHHH
T ss_pred CCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcc---------cccccHH
Confidence 3457999999999999999999999999988 99999999986665555556664 5555521 0001111
Q ss_pred HHHHhcchhHHHHHHHhhccCCCCCCCe-eEEEECCcchhHHHHHHHcCCCeEE
Q 012613 88 ALNAKCVVPFWDCLVKLTSISNVQEDSF-ACIITDPLWYFVHAVANDFKLPTII 140 (460)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~~p-Dlvi~D~~~~~~~~vA~~lgIP~v~ 140 (460)
.+..+++.+++ . ++ |++|.-....-...++...|+|..+
T Consensus 76 --------~~~~l~~~Lr~-----~-~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 --------GLNEVAREINA-----K-GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --------HHHHHHHHHHH-----H-CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --------HHHHHHHHHhh-----C-CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 12234556655 3 89 9999765555566788889999765
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.77 E-value=0.0003 Score=60.38 Aligned_cols=78 Identities=13% Similarity=0.132 Sum_probs=60.1
Q ss_pred Ccee-eeccChH---HhhcCCCccceeecc---C-chhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccC
Q 012613 334 RGHI-VKWAPQQ---EVLAHPAVGGFLTHG---G-WNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVE 405 (460)
Q Consensus 334 ~~~~-~~~vp~~---~ll~~~~~~~~I~HG---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 405 (460)
|+.+ .+++++. .++..+++ +|.-. | -.++.||+++|+|+|+... ..+...+ . .+.|..++. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEecC-CC
Confidence 7788 8999854 58889998 77533 2 4688999999999998754 3455666 5 367777765 47
Q ss_pred HHHHHHHHHHHhc-cc
Q 012613 406 RREIEIAVRRVMI-ET 420 (460)
Q Consensus 406 ~~~l~~ai~~vl~-~~ 420 (460)
.+.+.++|.++++ |+
T Consensus 167 ~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 167 PGELANAILKALELSR 182 (200)
T ss_dssp HHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHhcCH
Confidence 8999999999999 83
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.44 E-value=0.0021 Score=64.16 Aligned_cols=138 Identities=9% Similarity=0.058 Sum_probs=87.9
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEE--EcCCcccchhhhc-cCchhHHHhhcCCceeeeccChHH---h
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWV--VRPGLVREAEWLE-LLPTGFVEMLDGRGHIVKWAPQQE---V 346 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~vp~~~---l 346 (460)
..++|.+|++.....+..++...+.+++.+...+|. .+........... ..-.++ .+++.+.+.+|+.+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI----~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYL----GDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHH----GGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCC----CccEEEcCCCCHHHHHHH
Confidence 378999999887788888888888888877666664 3422110101000 011122 24667888888654 5
Q ss_pred hcCCCccceeec---cCchhHHHhHhcCCceeecccccchhhh-HHHhhhhheeeEe-cCCccCHHHHHHHHHHHhcc
Q 012613 347 LAHPAVGGFLTH---GGWNSTLESICEGVPMICQPYLGDQMVN-ARYISHVWRLGLH-LDGNVERREIEIAVRRVMIE 419 (460)
Q Consensus 347 l~~~~~~~~I~H---GG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~~v~~~~G~G~~-l~~~~~~~~l~~ai~~vl~~ 419 (460)
+..+|+ ++.- +|..|++||+++|||+|..+-..=--.. +..+.. .|+.-. +. -+.++..+...++.+|
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA--~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA--NTVDEYVERAVRLAEN 588 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE--SSHHHHHHHHHHHHHC
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec--CCHHHHHHHHHHHhCC
Confidence 578887 6543 7789999999999999998843211112 222334 355432 22 3678888888888888
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.41 E-value=0.00027 Score=66.25 Aligned_cols=110 Identities=15% Similarity=0.189 Sum_probs=81.1
Q ss_pred CceeeeccChHHh---hcCCCccceeeccCc---------hhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecC
Q 012613 334 RGHIVKWAPQQEV---LAHPAVGGFLTHGGW---------NSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLD 401 (460)
Q Consensus 334 ~~~~~~~vp~~~l---l~~~~~~~~I~HGG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~ 401 (460)
|+.+.+|+|+.++ |..++.+++.+-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 5699999998774 555566444433333 34789999999999855 56788889995 9999886
Q ss_pred CccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHH
Q 012613 402 GNVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDH 456 (460)
Q Consensus 402 ~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (460)
+.+++.+++..+..++ .+.|++|+++.+++++ .+.-..+++.+.+..
T Consensus 290 ---~~~e~~~~i~~l~~~~-~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNEDE-YIELVKNVRSFNPILR----KGFFTRRLLTESVFQ 336 (339)
T ss_dssp ---SHHHHHHHHHHCCHHH-HHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHH
Confidence 4678888888865443 4789999999999988 666666666665543
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=96.80 E-value=0.0089 Score=59.73 Aligned_cols=167 Identities=13% Similarity=0.129 Sum_probs=99.1
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhh---CCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChH---Hh
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLAN---SRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQ---EV 346 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~---~l 346 (460)
+.++++..|.... .+.+..+++|+.. .+.+++++..+... ....-.......+.++.+..+.+.. .+
T Consensus 326 ~~p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 326 KIPLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKK-----FEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp TSCEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHH-----HHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred CCcEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCch-----HHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 3455666777653 3445555666554 35555555433210 0111122233445666777777754 47
Q ss_pred hcCCCccceeecc---Cc-hhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCC---------ccCHHHHHHHH
Q 012613 347 LAHPAVGGFLTHG---GW-NSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDG---------NVERREIEIAV 413 (460)
Q Consensus 347 l~~~~~~~~I~HG---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~---------~~~~~~l~~ai 413 (460)
+..+|+ ||.-+ |. .+++||+++|+|+|+... ......|.+. .-|..... ..+++.|.++|
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai 471 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATL 471 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHH
Confidence 888888 87643 33 388999999999999764 3455555552 44443221 24678899999
Q ss_pred HHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhcC
Q 012613 414 RRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILSF 460 (460)
Q Consensus 414 ~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (460)
++++.....+.+++ ..+.++++.-|.++.+++.++.++++
T Consensus 472 ~ral~~~~~~~~~~-------~~~~am~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 472 KRAIKVVGTPAYEE-------MVRNCMNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HHHHHHTTSHHHHH-------HHHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred HHHHHhcCcHHHHH-------HHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 98875211033332 22333447788999999999988764
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.67 E-value=0.043 Score=50.86 Aligned_cols=133 Identities=12% Similarity=0.021 Sum_probs=76.0
Q ss_pred CCeEEEEEccCccc---CCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeecc--Ch-HH
Q 012613 272 PKSVIYVSFGSVVN---IDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWA--PQ-QE 345 (460)
Q Consensus 272 ~~~vI~vs~GS~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v--p~-~~ 345 (460)
+++.|.+.-|+... ++.+.+.++++.|.+.+.++++..++.. + ...-+.+.+.. .++.+.+.. .+ .+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~----e--~~~~~~i~~~~-~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH----E--EERAKRLAEGF-AYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH----H--HHHHHHHHTTC-TTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH----H--HHHHHHHHhhC-CcccccCCCCHHHHHH
Confidence 45677777777543 7778888888888766777665534321 0 00111221111 122333322 23 46
Q ss_pred hhcCCCccceeec-cCchhHHHhHhcCCceeec--ccccchhhhHHHhhhhheeeEe--cC-C-ccCHHHHHHHHHHHhc
Q 012613 346 VLAHPAVGGFLTH-GGWNSTLESICEGVPMICQ--PYLGDQMVNARYISHVWRLGLH--LD-G-NVERREIEIAVRRVMI 418 (460)
Q Consensus 346 ll~~~~~~~~I~H-GG~gs~~eal~~GvP~v~~--P~~~DQ~~na~~v~~~~G~G~~--l~-~-~~~~~~l~~ai~~vl~ 418 (460)
++.++++ +|+. .| +++=|.+.|+|+|++ |..... ++-.-.. ..-+. .. . +++++++.+++.++|+
T Consensus 250 li~~a~l--~I~~DSG--~~HlAaa~g~P~v~lfg~t~p~~--~~P~~~~--~~~~~~~~~cm~~I~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 250 VLAGAKF--VVSVDTG--LSHLTAALDRPNITVYGPTDPGL--IGGYGKN--QMVCRAPGNELSQLTANAVKQFIEENAE 321 (326)
T ss_dssp HHHTCSE--EEEESSH--HHHHHHHTTCCEEEEESSSCHHH--HCCCSSS--EEEEECGGGCGGGCCHHHHHHHHHHTTT
T ss_pred HHHhCCE--EEecCCc--HHHHHHHcCCCEEEEECCCChhh--cCCCCCC--ceEecCCcccccCCCHHHHHHHHHHHHH
Confidence 9999998 9988 55 455577799999998 432211 1100000 00010 01 2 7999999999999997
Q ss_pred c
Q 012613 419 E 419 (460)
Q Consensus 419 ~ 419 (460)
+
T Consensus 322 ~ 322 (326)
T 2gt1_A 322 K 322 (326)
T ss_dssp T
T ss_pred H
Confidence 6
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.04 E-value=0.0064 Score=58.71 Aligned_cols=77 Identities=10% Similarity=0.048 Sum_probs=56.6
Q ss_pred CceeeeccChHH---hhcCCCccceeecc---Cch-hHHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCH
Q 012613 334 RGHIVKWAPQQE---VLAHPAVGGFLTHG---GWN-STLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVER 406 (460)
Q Consensus 334 ~~~~~~~vp~~~---ll~~~~~~~~I~HG---G~g-s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 406 (460)
|+.+.+++|+.+ ++..+|+ ||.-+ |.| ++.||+++|+|+|+ -..+ ....+++. ..|..++. -++
T Consensus 296 ~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~d~ 366 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-LNP 366 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-CSH
T ss_pred cEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-CCH
Confidence 458889998754 8889998 77532 443 67999999999998 3222 12345552 46776665 578
Q ss_pred HHHHHHHHHHhcc
Q 012613 407 REIEIAVRRVMIE 419 (460)
Q Consensus 407 ~~l~~ai~~vl~~ 419 (460)
+.+.++|.++++|
T Consensus 367 ~~la~ai~~ll~~ 379 (413)
T 2x0d_A 367 ENIAETLVELCMS 379 (413)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999998
No 58
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=93.87 E-value=0.62 Score=45.60 Aligned_cols=105 Identities=14% Similarity=0.128 Sum_probs=66.8
Q ss_pred eeccChHH---hhcCCCccceeec---cCch-hHHHhHhcCC-----ceeecccccchhhhHHHhhhhheeeEecCCccC
Q 012613 338 VKWAPQQE---VLAHPAVGGFLTH---GGWN-STLESICEGV-----PMICQPYLGDQMVNARYISHVWRLGLHLDGNVE 405 (460)
Q Consensus 338 ~~~vp~~~---ll~~~~~~~~I~H---GG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 405 (460)
.+++++.+ ++..+|+ ||.- =|+| ++.||+++|+ |+|+--+.+-- ..+ .. |+.++. .+
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~----~~l-~~---g~lv~p-~d 405 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA----NEL-TS---ALIVNP-YD 405 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGG----GTC-TT---SEEECT-TC
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCH----HHh-CC---eEEECC-CC
Confidence 47788764 7888998 7753 3555 8899999998 66665443311 111 22 344444 57
Q ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 406 RREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 406 ~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
.+.++++|.++|+++. ..-+++.++.++..+ + .+..+.++.+++.+++
T Consensus 406 ~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 406 RDEVAAALDRALTMSL-AERISRHAEMLDVIV----K-NDINHWQECFISDLKQ 453 (482)
T ss_dssp HHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHh
Confidence 8999999999998521 123334444444443 3 4678888888887764
No 59
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=93.47 E-value=0.36 Score=42.47 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=31.4
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPL 55 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~ 55 (460)
.++||||+.-=.+. |---...|+++|.+ +|+|+++.|.....
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 45699988776665 55667888999976 89999999975553
No 60
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=91.89 E-value=2.4 Score=37.04 Aligned_cols=110 Identities=7% Similarity=0.026 Sum_probs=63.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeEEEEcCCCCCCCccCcccHHHHHHHHH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACN----YPHFEFHSISASLSETEASTEDMVAILIALN 90 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~----~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (460)
||||+.-=.+. |---...|+++|.+.| +|+++.|......... ..-+++..+..+.. +.....+..-.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~--~~v~GTPaDCV~lal 77 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY--TVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE--EETTCCHHHHHHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe--EEECCCHHHHHHHHH
Confidence 78887766654 5566889999999988 9999999755532211 12244444443211 333333333332221
Q ss_pred HhcchhHHHHHHHhhccCCCCCCCeeEEEEC----------Ccc---hhHHHHHHHcCCCeEEEeCc
Q 012613 91 AKCVVPFWDCLVKLTSISNVQEDSFACIITD----------PLW---YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D----------~~~---~~~~~vA~~lgIP~v~~~~~ 144 (460)
..+.. .. +||+||+- .++ ..+..-|..+|||.|.++..
T Consensus 78 -----------~~l~~----~~-~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 78 -----------RVILE----EK-KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp -----------HTTTT----TC-CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -----------HHhcC----CC-CCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 11211 02 79999963 222 33345577889999998753
No 61
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.12 E-value=0.14 Score=51.00 Aligned_cols=39 Identities=10% Similarity=0.219 Sum_probs=30.4
Q ss_pred CCceEEEEcCC--------CccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012613 13 NGKRVILFPLP--------YQGHINPMLQIASVLYSKGFSITIIHTNLN 53 (460)
Q Consensus 13 ~~~~Il~~~~~--------~~GH~~p~~~La~~L~~rGh~V~~~~~~~~ 53 (460)
.+|||+++++- +.|+ -.-.|+++|+++||+|++++|.+.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLad--vv~~L~~aL~~~G~~V~Vi~P~Y~ 54 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGD--VLGGLPPAMAANGHRVMVISPRYD 54 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHH--HHHHHHHHHHTTTCEEEEEEECCS
T ss_pred CCcEEEEEEEeccchhccCcHHH--HHHHHHHHHHHcCCeEEEEecCch
Confidence 48999999743 2233 366899999999999999997643
No 62
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=90.64 E-value=3.6 Score=35.90 Aligned_cols=108 Identities=7% Similarity=-0.063 Sum_probs=62.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCeEEEEcCCCC----CCCccCcccHHHHH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNAC----NYPHFEFHSISASL----SETEASTEDMVAIL 86 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~----~~~gi~~~~~~~~~----~~~~~~~~~~~~~~ 86 (460)
||||+.-=.+. |---+..|+++|.+.| +|+++.|..+..... -..-+++..++.+. ...+.....+..-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 56666554443 4445788999999888 999999975543221 11235566664321 01233334444333
Q ss_pred HHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEEC----------Ccc---hhHHHHHHHcCCCeEEEeC
Q 012613 87 IALNAKCVVPFWDCLVKLTSISNVQEDSFACIITD----------PLW---YFVHAVANDFKLPTIILQT 143 (460)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D----------~~~---~~~~~vA~~lgIP~v~~~~ 143 (460)
..... +.. +||+||+- .++ ..+..-|..+|||.|.++.
T Consensus 79 ~lal~------------l~~-------~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 ALGLH------------LFG-------PVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHH------------HSC-------SCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHc------------CCC-------CCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 22222 223 89999963 222 3444557789999999975
No 63
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=90.30 E-value=1.1 Score=45.28 Aligned_cols=107 Identities=12% Similarity=0.036 Sum_probs=62.4
Q ss_pred eccCh---------HHhhcCCCccceeecc---Cc-hhHHHhHhcCCceeecccccchhhhHHHhhhh------heeeEe
Q 012613 339 KWAPQ---------QEVLAHPAVGGFLTHG---GW-NSTLESICEGVPMICQPYLGDQMVNARYISHV------WRLGLH 399 (460)
Q Consensus 339 ~~vp~---------~~ll~~~~~~~~I~HG---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~------~G~G~~ 399 (460)
.|++. .+++..+++ ||.-+ |+ .+.+||+++|+|+|+.-..+ ....|.+. -+.|+.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHHTTEE
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCCceEE
Confidence 77765 458989998 87654 33 48999999999999976543 11222110 134554
Q ss_pred cC-C-ccCHHHHHHHHHHHh----c-ccc-HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHhc
Q 012613 400 LD-G-NVERREIEIAVRRVM----I-ETE-GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHILS 459 (460)
Q Consensus 400 l~-~-~~~~~~l~~ai~~vl----~-~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (460)
+. . ..+.+++.++|.++| . +++ ...++++++++++ .-+.++.+++.++.+++
T Consensus 573 V~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~--------~FSWe~iA~~Yl~~Ye~ 632 (725)
T 3nb0_A 573 IVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD--------LLDWKRMGLEYVKARQL 632 (725)
T ss_dssp EECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG--------GGBHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH--------hCCHHHHHHHHHHHHHH
Confidence 42 2 445555555555554 3 311 2234444443333 45688888888877653
No 64
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=89.77 E-value=4.5 Score=35.33 Aligned_cols=110 Identities=8% Similarity=0.045 Sum_probs=60.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeEEEEcCCCCC-CCccCcccHHHHHHHH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACN----YPHFEFHSISASLS-ETEASTEDMVAILIAL 89 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~----~~gi~~~~~~~~~~-~~~~~~~~~~~~~~~~ 89 (460)
||||+.-=.+. |---+..|+++|.+.| +|+++.|..+...... ..-+++..++.+-. ..+.....+..-....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la 78 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA 78 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence 56666554443 4445788999998888 9999999755432211 12244444432100 1122233333333222
Q ss_pred HHhcchhHHHHHHHhhccCCCCCCCeeEEEEC----------Ccc---hhHHHHHHHcCCCeEEEeC
Q 012613 90 NAKCVVPFWDCLVKLTSISNVQEDSFACIITD----------PLW---YFVHAVANDFKLPTIILQT 143 (460)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D----------~~~---~~~~~vA~~lgIP~v~~~~ 143 (460)
. ..+.. . +||+||+- .++ ..+..-|..+|||.|.++.
T Consensus 79 l-----------~~l~~-----~-~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 79 Y-----------NVVMD-----K-RVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp H-----------HTTST-----T-CCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred H-----------Hhhcc-----C-CCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1 12222 3 89999963 222 3344557789999999975
No 65
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=89.66 E-value=3.3 Score=36.91 Aligned_cols=110 Identities=7% Similarity=0.026 Sum_probs=61.1
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeEEEEcCCCCCCCccCcccHHHHHHHHH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACN----YPHFEFHSISASLSETEASTEDMVAILIALN 90 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~----~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (460)
||||+.-=.+. +---+..|+++|.+.| +|+++.|..+...... ..-+++..++.+-...+.....+..-.....
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~lal 78 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLAT 78 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHHH
Confidence 56666554443 4445788999999888 9999999755532211 1224444443210012333334433332221
Q ss_pred HhcchhHHHHHHHhhccCCCCCCCeeEEEEC-----------Cc---chhHHHHHHHcCCCeEEEeCc
Q 012613 91 AKCVVPFWDCLVKLTSISNVQEDSFACIITD-----------PL---WYFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D-----------~~---~~~~~~vA~~lgIP~v~~~~~ 144 (460)
..+ . . +||+||+- .+ +..+..-|..+|||.|.++..
T Consensus 79 -----------~~l-~-----~-~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 79 -----------FGL-G-----R-KYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp -----------HHH-T-----S-CCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred -----------hcC-C-----C-CCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 122 2 2 89999962 12 233444577789999999864
No 66
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=88.98 E-value=6.6 Score=38.26 Aligned_cols=109 Identities=13% Similarity=0.084 Sum_probs=70.3
Q ss_pred CceeeeccChH---HhhcCCCccceee---ccCch-hHHHhHhcC---CceeecccccchhhhHHHhhhhheeeEecCCc
Q 012613 334 RGHIVKWAPQQ---EVLAHPAVGGFLT---HGGWN-STLESICEG---VPMICQPYLGDQMVNARYISHVWRLGLHLDGN 403 (460)
Q Consensus 334 ~~~~~~~vp~~---~ll~~~~~~~~I~---HGG~g-s~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 403 (460)
.+.+...+|+. +++..+++ ||. .=|+| +..|++++| .|+|+--+.+ .+..+.+ -|+.+..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECC-
Confidence 46677888874 47888888 664 35888 458999986 5665544333 2332322 3566666
Q ss_pred cCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHh
Q 012613 404 VERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHIL 458 (460)
Q Consensus 404 ~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
.+.+.++++|.++|++.. +.-+++.+++.+... ......-++.+++.|+
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLA 471 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHh
Confidence 588999999999998632 334555555655554 3456666777776664
No 67
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=86.97 E-value=2.9 Score=36.73 Aligned_cols=39 Identities=10% Similarity=0.144 Sum_probs=30.8
Q ss_pred CCCceEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLP--YQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~--~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.++|+.+|++.. ..|=..-...|++.|+++|++|.++-+
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 356666655543 448999999999999999999999864
No 68
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=85.42 E-value=0.47 Score=45.45 Aligned_cols=39 Identities=31% Similarity=0.416 Sum_probs=31.0
Q ss_pred CCceEEEEcCCCc-----cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQ-----GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~-----GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+|||+++..... |=......+|++|+++||+|+++++.
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 4799988874421 33356889999999999999999986
No 69
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=84.36 E-value=10 Score=33.25 Aligned_cols=107 Identities=10% Similarity=0.087 Sum_probs=60.2
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeEEEEcCCCCCCCccCc-ccHHHHHHHH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACN----YPHFEFHSISASLSETEAST-EDMVAILIAL 89 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~----~~gi~~~~~~~~~~~~~~~~-~~~~~~~~~~ 89 (460)
||||+.-=.+. |---...|+++|++.| +|+++.|......... ..-++...+.. ..+... ..+..-....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~~---~~~~v~~GTPaDCV~la 76 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSLTLESSLRTFTFDN---GDIAVQMGTPTDCVYLG 76 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCEEEECTT---SCEEEETCCHHHHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCcCCCCCeEEEEeCC---CCeEECCCCHHHHHHHH
Confidence 67777665554 5556788999998876 9999999755432211 11234444321 123333 3343333222
Q ss_pred HHhcchhHHHHHHHhhccCCCCCCCeeEEEEC----------Ccc---hhHHHHHHHcCCCeEEEeC
Q 012613 90 NAKCVVPFWDCLVKLTSISNVQEDSFACIITD----------PLW---YFVHAVANDFKLPTIILQT 143 (460)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D----------~~~---~~~~~vA~~lgIP~v~~~~ 143 (460)
. ..+.. . +||+||+- .++ ..+..-|..+|||.|.++.
T Consensus 77 l-----------~~ll~-----~-~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 77 V-----------NALMR-----P-RPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp H-----------HTTSS-----S-CCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred H-----------hhccC-----C-CCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 1 22222 3 89999963 222 2233345668999999975
No 70
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.13 E-value=6.6 Score=34.43 Aligned_cols=109 Identities=8% Similarity=0.035 Sum_probs=58.2
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeEEEEcCCCCCCCccCcccHHHHHHHHH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACN----YPHFEFHSISASLSETEASTEDMVAILIALN 90 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~----~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (460)
.|||+.-=.+. +---+..|+++|.+.| +|+++.|..+...... ..-+++...... ..+.....+..-....
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~--~~~~v~GTPaDCV~la- 76 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTD--FYTVIDGTPADCVHLG- 76 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETT--EEEETTCCHHHHHHHH-
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeecc--ceeecCCChHHHHhhh-
Confidence 35555543343 3445778999999888 5999988755432211 122334333211 0111223333322221
Q ss_pred HhcchhHHHHHHHhhccCCCCCCCeeEEEE----------CCcc---hhHHHHHHHcCCCeEEEeC
Q 012613 91 AKCVVPFWDCLVKLTSISNVQEDSFACIIT----------DPLW---YFVHAVANDFKLPTIILQT 143 (460)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~----------D~~~---~~~~~vA~~lgIP~v~~~~ 143 (460)
+..+.. .. +||+||+ |.++ ..|..=|..+|||.|.++.
T Consensus 77 ----------l~~~l~----~~-~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 77 ----------YRVILE----EK-KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ----------HHTTTT----TC-CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----------hhhhcC----CC-CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 122221 13 8999998 2222 4455567888999999874
No 71
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=83.71 E-value=4 Score=34.27 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=63.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC-C-----CCCCCCCCeEEEEcCCCCCCCccCcccHHHHH
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLN-P-----LNACNYPHFEFHSISASLSETEASTEDMVAIL 86 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~-~-----~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
++..|.+++..+.|-..-.+.+|.+.+.+|+.|.|+..... . ...... +++++....++.. ...+...
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L-~v~~~~~g~gf~~---~~~~~~~-- 100 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH-GVEFQVMATGFTW---ETQNREA-- 100 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG-TCEEEECCTTCCC---CGGGHHH--
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC-CcEEEEccccccc---CCCCcHH--
Confidence 35788899999999999999999999999999999965322 1 011222 4788887765542 1222221
Q ss_pred HHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcch
Q 012613 87 IALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWY 125 (460)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~ 125 (460)
-...+...+....+.+.. . ++|+||.|-...
T Consensus 101 --~~~~a~~~l~~a~~~l~~-----~-~yDlvILDEi~~ 131 (196)
T 1g5t_A 101 --DTAACMAVWQHGKRMLAD-----P-LLDMVVLDELTY 131 (196)
T ss_dssp --HHHHHHHHHHHHHHHTTC-----T-TCSEEEEETHHH
T ss_pred --HHHHHHHHHHHHHHHHhc-----C-CCCEEEEeCCCc
Confidence 112223334444444433 3 799999998754
No 72
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=82.13 E-value=18 Score=29.15 Aligned_cols=140 Identities=14% Similarity=0.133 Sum_probs=80.6
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCC
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPA 351 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~ 351 (460)
-||.|-|-+||.+ +....++....|+.+|..+-..+-+.. .+|+.+.+- +. =.....
T Consensus 10 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--------R~p~~l~~~----------~~---~a~~~g 66 (170)
T 1xmp_A 10 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH--------RTPDYMFEY----------AE---TARERG 66 (170)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHHH----------HH---HTTTTT
T ss_pred CCCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEecc--------CCHHHHHHH----------HH---HHHhCC
Confidence 3567778888887 566778888888988988766665543 255554211 00 011111
Q ss_pred ccceeeccCch----hHHHhHhcCCceeecccccc--hhhhH-HHhhh--hheeeE---ecC--CccCHHHHHHHHHHHh
Q 012613 352 VGGFLTHGGWN----STLESICEGVPMICQPYLGD--QMVNA-RYISH--VWRLGL---HLD--GNVERREIEIAVRRVM 417 (460)
Q Consensus 352 ~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~D--Q~~na-~~v~~--~~G~G~---~l~--~~~~~~~l~~ai~~vl 417 (460)
++.+|.=.|.. ++..+ ..-+|+|.+|.... ....+ .-+.. . |+.+ .++ ...++..++..|. -+
T Consensus 67 ~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~ 143 (170)
T 1xmp_A 67 LKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GS 143 (170)
T ss_dssp CCEEEEEEESSCCHHHHHHT-TCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HT
T ss_pred CcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-cc
Confidence 23377766643 33333 34789999998643 12221 11222 2 4542 233 1356666666664 45
Q ss_pred ccccHHHHHHHHHHHHHHHHHhh
Q 012613 418 IETEGQEMRERILYSKEKAHLCL 440 (460)
Q Consensus 418 ~~~~~~~~~~~a~~~~~~~~~~~ 440 (460)
.| +.++++.+.+++++++.+
T Consensus 144 ~d---~~l~~kl~~~r~~~~~~v 163 (170)
T 1xmp_A 144 FH---DDIHDALELRREAIEKDV 163 (170)
T ss_dssp TC---HHHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHHH
Confidence 66 789999999998887543
No 73
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=81.76 E-value=1.9 Score=33.88 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=35.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.+|++.+.++-.|-....-++..|..+|++|..++..
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467899999999999999999999999999999988763
No 74
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=81.69 E-value=6.7 Score=32.76 Aligned_cols=79 Identities=18% Similarity=0.201 Sum_probs=50.6
Q ss_pred ceEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCC----CCCCCCeEEEEcCCCCCCCccCcccHHHHHHH
Q 012613 15 KRVILFP--LPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLN----ACNYPHFEFHSISASLSETEASTEDMVAILIA 88 (460)
Q Consensus 15 ~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~----~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (460)
|+++.+. -|+.|=..-...||..|+++|++|.++-....... .....++.+.+.+.
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~~------------------ 62 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAAS------------------ 62 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTTSCCSSEEEECCS------------------
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhcCCCCCcEEecCc------------------
Confidence 3444443 45679999999999999999999999876522210 01112333333321
Q ss_pred HHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcc
Q 012613 89 LNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLW 124 (460)
Q Consensus 89 ~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~ 124 (460)
..+.+.++.+.. .+|+||.|.-.
T Consensus 63 ------~~l~~~l~~l~~-------~yD~viiD~~~ 85 (206)
T 4dzz_A 63 ------EKDVYGIRKDLA-------DYDFAIVDGAG 85 (206)
T ss_dssp ------HHHHHTHHHHTT-------TSSEEEEECCS
T ss_pred ------HHHHHHHHHhcC-------CCCEEEEECCC
Confidence 345566677755 78999999754
No 75
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=79.99 E-value=2.1 Score=37.50 Aligned_cols=36 Identities=8% Similarity=0.137 Sum_probs=28.2
Q ss_pred ceEEEEc-CC-CccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFP-LP-YQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~-~~-~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++.+|++ .. ..|=..-...|++.|+++|.+|.++-+
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 4444444 33 449999999999999999999999864
No 76
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.90 E-value=2.5 Score=35.97 Aligned_cols=37 Identities=14% Similarity=0.137 Sum_probs=32.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++||++.-.|+.|-+. ...|.++|+++|++|.++.++
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECc
Confidence 5789888888877776 899999999999999999886
No 77
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=75.79 E-value=5.3 Score=34.97 Aligned_cols=31 Identities=23% Similarity=0.238 Sum_probs=24.4
Q ss_pred CeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.||+|| +|+.. ..+..=|.++|||+|.+..+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 688877 67665 55677799999999998654
No 78
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=74.74 E-value=26 Score=33.24 Aligned_cols=35 Identities=11% Similarity=0.065 Sum_probs=24.3
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+.+||+++..+... . .+.++.++.|++|+++.+.
T Consensus 3 ~~~k~l~Il~~~~~~--~---~i~~aa~~lG~~vv~v~~~ 37 (425)
T 3vot_A 3 KRNKNLAIICQNKHL--P---FIFEEAERLGLKVTFFYNS 37 (425)
T ss_dssp CCCCEEEEECCCTTC--C---HHHHHHHHTTCEEEEEEET
T ss_pred CCCcEEEEECCChhH--H---HHHHHHHHCCCEEEEEECC
Confidence 356788888655432 2 3567778889999988664
No 79
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=74.40 E-value=3.6 Score=33.83 Aligned_cols=40 Identities=20% Similarity=0.153 Sum_probs=32.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNP 54 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~ 54 (460)
++||++.-.|+.|=+. ...+.++|+++|++|.++.++...
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGG
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHH
Confidence 3788888888865554 889999999999999999987433
No 80
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=73.81 E-value=2.8 Score=35.54 Aligned_cols=48 Identities=13% Similarity=0.146 Sum_probs=33.4
Q ss_pred cccccCCCCceEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCCCC
Q 012613 6 ESCRLPRNGKRVILFPLPYQGHINPMLQIASVLYS-KGFSITIIHTNLNP 54 (460)
Q Consensus 6 ~~~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~-rGh~V~~~~~~~~~ 54 (460)
++.....+++||++.-.|+.+=+ -...++++|.+ +|++|.++.++...
T Consensus 11 ~~~~~~l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 11 AAAPLMERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp -----CCSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGG
T ss_pred hhhhcccCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHH
Confidence 33444556789999999987644 46999999999 89999999987443
No 81
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=73.57 E-value=8.9 Score=33.07 Aligned_cols=111 Identities=8% Similarity=0.017 Sum_probs=62.8
Q ss_pred cccccCCCCceEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCC---CCCCCCCeEEEEcCC-CCCCCccCc
Q 012613 6 ESCRLPRNGKRVILFPLPYQGHINPMLQIASVLYSK--GFSITIIHTNLNPL---NACNYPHFEFHSISA-SLSETEAST 79 (460)
Q Consensus 6 ~~~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~---~~~~~~gi~~~~~~~-~~~~~~~~~ 79 (460)
+.+....+.|||+|+.+++ |+ -+..+.++|.+. +++|..+.+..... ..+...|+.+..++. .+. .
T Consensus 14 ~~~~~~~~~~rI~~l~SG~-g~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~----~- 85 (229)
T 3auf_A 14 ENLYFQGHMIRIGVLISGS-GT--NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYP----S- 85 (229)
T ss_dssp BSSSCBTTCEEEEEEESSC-CH--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSS----S-
T ss_pred ccccccCCCcEEEEEEeCC-cH--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECccccc----c-
Confidence 3444455668999998887 43 367788888876 68887665531111 111124666665442 111 0
Q ss_pred ccHHHHHHHHHHhcchhHH-HHHHHhhccCCCCCCCeeEEEECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 80 EDMVAILIALNAKCVVPFW-DCLVKLTSISNVQEDSFACIITDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~-~~l~~l~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
...+. ++++.+.+ . +||++|+-.+. .....+-....-.++-++++
T Consensus 86 --------------r~~~~~~~~~~l~~-----~-~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 86 --------------RTAFDAALAERLQA-----Y-GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp --------------HHHHHHHHHHHHHH-----T-TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred --------------hhhccHHHHHHHHh-----c-CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 01122 23444444 3 89999987664 33344555566678887765
No 82
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=73.52 E-value=5.6 Score=33.54 Aligned_cols=41 Identities=20% Similarity=-0.006 Sum_probs=34.0
Q ss_pred CCCceEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCCCC
Q 012613 12 RNGKRVILFPLPYQGHIN-PMLQIASVLYSKGFSITIIHTNLN 53 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~-p~~~La~~L~~rGh~V~~~~~~~~ 53 (460)
.+++||++.-.|+ +..+ -...+.++|+++|++|.++.++..
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 3468899888888 4555 789999999999999999998733
No 83
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=72.86 E-value=4.4 Score=34.02 Aligned_cols=36 Identities=8% Similarity=0.040 Sum_probs=31.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSK-GFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~V~~~~~~ 51 (460)
|||++.-.|+.|-+. ...+.++|+++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 588888888876665 89999999999 9999999886
No 84
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=72.63 E-value=3.3 Score=33.58 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=35.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.+|++.+.++-.|-....-++..|...|++|......
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 578999999999999999999999999999999987664
No 85
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=71.57 E-value=4.1 Score=34.53 Aligned_cols=38 Identities=13% Similarity=0.071 Sum_probs=32.0
Q ss_pred CCceEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINP-MLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p-~~~La~~L~~rGh~V~~~~~~ 51 (460)
+++||++.-.|+ +..+- ...+.+.|+++|++|.++.++
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 457888888887 45665 889999999999999999987
No 86
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=71.45 E-value=40 Score=27.47 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=79.1
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCC
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPA 351 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~ 351 (460)
-+|.|-|-+||.+ +-...+...+.|++++..+-..+-+.. ..|+.+.+ | ..-.....
T Consensus 21 mkp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAH--------Rtp~~l~~----------~---~~~a~~~g 77 (181)
T 4b4k_A 21 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH--------RTPDYMFE----------Y---AETARERG 77 (181)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHH----------H---HHHTTTTT
T ss_pred CCccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEccc--------cChHHHHH----------H---HHHHHhcC
Confidence 3577888899987 456788899999999988777666543 25554421 1 11111122
Q ss_pred ccceeeccCch----hHHHhHhcCCceeecccccch---hhhHHHhhhhheeeEecCC-c------cCHHHHHHHHHHHh
Q 012613 352 VGGFLTHGGWN----STLESICEGVPMICQPYLGDQ---MVNARYISHVWRLGLHLDG-N------VERREIEIAVRRVM 417 (460)
Q Consensus 352 ~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ---~~na~~v~~~~G~G~~l~~-~------~~~~~l~~ai~~vl 417 (460)
++.+|.-.|.- ++.. -..-+|+|++|..... .+.-.-+.. +=.|+-+-. . .++.-++..|- .+
T Consensus 78 ~~ViIa~AG~aahLpGvvA-a~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qIL-a~ 154 (181)
T 4b4k_A 78 LKVIIAGAGGAAHLPGMVA-AKTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQIL-GS 154 (181)
T ss_dssp CCEEEEEECSSCCHHHHHH-TTCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHH-TT
T ss_pred ceEEEEeccccccchhhHH-hcCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHH-cc
Confidence 33477666532 3333 3567899999996543 222233333 333333222 2 23333444332 23
Q ss_pred ccccHHHHHHHHHHHHHHHHHh
Q 012613 418 IETEGQEMRERILYSKEKAHLC 439 (460)
Q Consensus 418 ~~~~~~~~~~~a~~~~~~~~~~ 439 (460)
.| +.++++.+..++++++.
T Consensus 155 ~d---~~l~~kl~~~r~~~~~~ 173 (181)
T 4b4k_A 155 FH---DDIHDALELRREAIEKD 173 (181)
T ss_dssp TC---HHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHH
Confidence 55 68888888888887743
No 87
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=70.80 E-value=5.1 Score=34.02 Aligned_cols=39 Identities=18% Similarity=0.130 Sum_probs=35.8
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.+|++.+.++-.|-....-++..|..+|++|..+...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467899999999999999999999999999999998764
No 88
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=70.73 E-value=3.5 Score=32.85 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=27.2
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|.++||+++.. |++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 35678888854 4444 78899999999999998873
No 89
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=70.62 E-value=6.2 Score=34.78 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=36.8
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++.+|++.+.++-.|-....-++..|..+|++|..++..
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4578999999999999999999999999999999998874
No 90
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=69.16 E-value=4.8 Score=36.13 Aligned_cols=32 Identities=22% Similarity=0.412 Sum_probs=23.9
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|||++. |+.|.+- ..|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 677654 4446554 4578999999999999875
No 91
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=68.94 E-value=14 Score=35.68 Aligned_cols=88 Identities=14% Similarity=0.129 Sum_probs=52.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccCcccHHHHHHHHHHhc
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEASTEDMVAILIALNAKC 93 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (460)
++|++++.-+ .-.+.+++-|.+-|.+|..+.+........+.. .+.....+..
T Consensus 313 Gkrv~i~~~~-----~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~------------~~~v~~~D~~---------- 365 (458)
T 3pdi_B 313 SARTAIAADP-----DLLLGFDALLRSMGAHTVAAVVPARAAALVDSP------------LPSVRVGDLE---------- 365 (458)
T ss_dssp TCEEEEECCH-----HHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTT------------SSCEEESHHH----------
T ss_pred CCEEEEECCc-----HHHHHHHHHHHHCCCEEEEEEECCCChhhhhCc------------cCcEEeCCHH----------
Confidence 6888886433 345688888988999999988754222111100 0000001111
Q ss_pred chhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEe
Q 012613 94 VVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQ 142 (460)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~ 142 (460)
.+++.++ + . +||++|.+.. ...+|+++|||++.+.
T Consensus 366 --~le~~i~---~-----~-~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 --DLEHAAR---A-----G-QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp --HHHHHHH---H-----H-TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred --HHHHHHH---h-----c-CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 1222222 2 2 8999999865 5679999999999853
No 92
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=68.71 E-value=15 Score=31.04 Aligned_cols=46 Identities=11% Similarity=-0.048 Sum_probs=33.2
Q ss_pred chhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEE
Q 012613 263 CISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWV 308 (460)
Q Consensus 263 l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 308 (460)
+.+|+.+...+.++|+..+|........+....++++.+|..+.++
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3455544446789999988775445567888999999999875543
No 93
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=67.56 E-value=6.5 Score=33.36 Aligned_cols=40 Identities=13% Similarity=0.089 Sum_probs=33.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNP 54 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~ 54 (460)
+++||++.-.|+.+-+. ...|.++|+++| +|.++.++...
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSL 57 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHH
Confidence 36899999999987766 899999999999 99999987433
No 94
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=67.08 E-value=10 Score=34.18 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=31.0
Q ss_pred CCceEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPL--PYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~--~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+++++++++. |+.|=..-...||..|+++|.+|.++-..
T Consensus 102 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 102 TENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp CSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 4455555543 57799999999999999999999998665
No 95
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=66.95 E-value=8.7 Score=29.89 Aligned_cols=38 Identities=11% Similarity=0.089 Sum_probs=28.4
Q ss_pred CceEEE-EcCC--CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVIL-FPLP--YQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~-~~~~--~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++++| +..+ +.......+.+|...++.||+|+++-+.
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 355544 4444 4567788899999999999999988775
No 96
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=66.95 E-value=12 Score=33.52 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=31.0
Q ss_pred CCCceEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFP--LPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++.++++++ -|+.|-..-...||..|++.|.+|.++-..
T Consensus 89 ~~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D 130 (286)
T 3la6_A 89 QAQNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCD 130 (286)
T ss_dssp TTTCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 3444555444 356799999999999999999999998665
No 97
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=66.77 E-value=8.9 Score=30.17 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=29.5
Q ss_pred CceEEEEc-CC-CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFP-LP-YQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~-~~-~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
-|+++++- .| ..-.+--.+-++..|.++||+|++.+++
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCH
Confidence 46665554 33 3366777899999999999999999987
No 98
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=65.80 E-value=19 Score=31.00 Aligned_cols=26 Identities=31% Similarity=0.521 Sum_probs=21.2
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012613 25 QGHINPMLQIASVLYSKGFSITIIHTNL 52 (460)
Q Consensus 25 ~GH~~p~~~La~~L~~rGh~V~~~~~~~ 52 (460)
.|.+ -..+|++|+++|++|++++.+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 4543 4678999999999999999864
No 99
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=64.14 E-value=9.1 Score=31.88 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=31.3
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+||++.-.|+.|-+ =...+.++|.++|++|.++.++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECh
Confidence 58988888987755 5789999999999999999886
No 100
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=63.68 E-value=6 Score=33.16 Aligned_cols=38 Identities=11% Similarity=0.013 Sum_probs=32.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+++||++.-.|+.|=+. ...+.++|.++|++|.++.++
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~ 44 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTK 44 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEch
Confidence 46789888888866664 789999999999999999886
No 101
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=63.62 E-value=16 Score=35.01 Aligned_cols=40 Identities=8% Similarity=0.288 Sum_probs=35.0
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLN 53 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~ 53 (460)
+..|+++..++.|-..-...||..|+++|++|.++..+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~ 139 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTW 139 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCS
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 5677888888999999999999999999999999887633
No 102
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=63.39 E-value=8.1 Score=32.97 Aligned_cols=40 Identities=18% Similarity=0.137 Sum_probs=35.8
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++.+|++.+.++-.|-....-++..|..+|++|+.++..
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 3478999999999999999999999999999999998774
No 103
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=62.91 E-value=5.6 Score=35.39 Aligned_cols=52 Identities=15% Similarity=0.219 Sum_probs=36.8
Q ss_pred CCccceeeccCchhHHHhHhc------CCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcc
Q 012613 350 PAVGGFLTHGGWNSTLESICE------GVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIE 419 (460)
Q Consensus 350 ~~~~~~I~HGG~gs~~eal~~------GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 419 (460)
+|+ +|.=||=||+.+++.. ++|++++|.. . +|. + .+++++++.+++++++++
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lgf---l-~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LGF---Y-ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CCS---S-CCBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CCc---C-CcCCHHHHHHHHHHHHcC
Confidence 455 9999999999999775 8999999851 1 121 1 134566777777777765
No 104
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=62.37 E-value=61 Score=26.21 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=78.6
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCC
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPA 351 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~ 351 (460)
+.|.|-|-+||.+ +-...++....|+.+|..+-..+.+.. ..|+.+.+ | ..-.....
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saH--------R~p~~l~~----------~---~~~a~~~g 67 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAH--------RMPDEMFD----------Y---AEKARERG 67 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHH----------H---HHHHTTTT
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEccc--------cCHHHHHH----------H---HHHHHhcC
Confidence 4577888889887 456778888889999988766665543 25555421 1 11111122
Q ss_pred ccceeeccCc----hhHHHhHhcCCceeecccccch---hhhHHHhhhhh--eeeEecCC-----ccCHHHHHHHHHHHh
Q 012613 352 VGGFLTHGGW----NSTLESICEGVPMICQPYLGDQ---MVNARYISHVW--RLGLHLDG-----NVERREIEIAVRRVM 417 (460)
Q Consensus 352 ~~~~I~HGG~----gs~~eal~~GvP~v~~P~~~DQ---~~na~~v~~~~--G~G~~l~~-----~~~~~~l~~ai~~vl 417 (460)
++.+|.-.|. .++..+ ..-+|+|.+|....- .+--.-+.. + |+.+..-. ..++.-++..| -.+
T Consensus 68 ~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvatv~i~~~~a~NAallA~~I-La~ 144 (173)
T 4grd_A 68 LRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVATFAIGEAGAANAALFAVSI-LSG 144 (173)
T ss_dssp CSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSHHHHHHHHHHHHHH-HTT
T ss_pred CeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceEEecCCcchHHHHHHHHHH-HcC
Confidence 3336665553 234333 557999999985432 221122222 2 44332211 23344444444 234
Q ss_pred ccccHHHHHHHHHHHHHHHHHh
Q 012613 418 IETEGQEMRERILYSKEKAHLC 439 (460)
Q Consensus 418 ~~~~~~~~~~~a~~~~~~~~~~ 439 (460)
+| +.++++.+.++++.++.
T Consensus 145 ~d---~~l~~kl~~~r~~~~~~ 163 (173)
T 4grd_A 145 NS---VDYANRLAAFRVRQNEA 163 (173)
T ss_dssp SC---HHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHH
Confidence 56 78999999998888754
No 105
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=62.10 E-value=6.3 Score=34.76 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=38.4
Q ss_pred CCCccceeeccCchhHHHhHhc---CCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcc
Q 012613 349 HPAVGGFLTHGGWNSTLESICE---GVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIE 419 (460)
Q Consensus 349 ~~~~~~~I~HGG~gs~~eal~~---GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 419 (460)
.+|+ +|+-||=||+.+++.. ++|+++++.. . +|.- . .+.++++.++++++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl--~--~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFL--T--SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSS--C--CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCcc--C--cCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999887 8899988732 1 1111 1 35677788888888765
No 106
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=60.96 E-value=16 Score=31.35 Aligned_cols=148 Identities=14% Similarity=0.081 Sum_probs=78.9
Q ss_pred hhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhc-CCceeeeccCh
Q 012613 265 SWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLD-GRGHIVKWAPQ 343 (460)
Q Consensus 265 ~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~vp~ 343 (460)
-|++- .++++++|..|.++ ...++.|.+.|..+.++.+.. .+.+.+... .++.....--.
T Consensus 25 ifl~L-~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~-----------~~~l~~l~~~~~i~~i~~~~~ 85 (223)
T 3dfz_A 25 VMLDL-KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV-----------SAEINEWEAKGQLRVKRKKVG 85 (223)
T ss_dssp EEECC-TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC-----------CHHHHHHHHTTSCEEECSCCC
T ss_pred cEEEc-CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC-----------CHHHHHHHHcCCcEEEECCCC
Confidence 34443 46789999877554 445666766788877665432 122222111 22333322223
Q ss_pred HHhhcCCCccceeeccCchhHHHhHh----cCCceeecccccchhhhH-----HHhhhhheeeEecC--C--ccCHHHHH
Q 012613 344 QEVLAHPAVGGFLTHGGWNSTLESIC----EGVPMICQPYLGDQMVNA-----RYISHVWRLGLHLD--G--NVERREIE 410 (460)
Q Consensus 344 ~~ll~~~~~~~~I~HGG~gs~~eal~----~GvP~v~~P~~~DQ~~na-----~~v~~~~G~G~~l~--~--~~~~~~l~ 410 (460)
.+.|..+++ +|.--|.-.+.+.++ .|+|+-+ .|.+..+ ..+.+. ++-+.+. + ..-+..|+
T Consensus 86 ~~dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR 158 (223)
T 3dfz_A 86 EEDLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIK 158 (223)
T ss_dssp GGGSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHH
T ss_pred HhHhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHH
Confidence 345667776 888777665555544 3555333 3443333 222332 3333333 2 34456788
Q ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHh
Q 012613 411 IAVRRVMIETEGQEMRERILYSKEKAHLC 439 (460)
Q Consensus 411 ~ai~~vl~~~~~~~~~~~a~~~~~~~~~~ 439 (460)
+.|.+.+..+ -..+-+.+.++++++++.
T Consensus 159 ~~ie~~lp~~-~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 159 EDLSSNYDES-YTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHSCTH-HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHccHH-HHHHHHHHHHHHHHHHHH
Confidence 8888877542 246778888888888753
No 107
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=60.47 E-value=66 Score=26.04 Aligned_cols=141 Identities=16% Similarity=0.124 Sum_probs=77.9
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCcc
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVG 353 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~ 353 (460)
+.|-|-+||.+ +....++....|+..|..+-+.+-+.. .+|+.+.+- + .=.....++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~SaH--------R~p~~~~~~----------~---~~a~~~g~~ 69 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSAH--------RTPDRLFSF----------A---EQAEANGLH 69 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHHH----------H---HHTTTTTCS
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEccc--------CCHHHHHHH----------H---HHHHhCCCc
Confidence 45666678776 456778888888898988766665543 255554211 0 001111233
Q ss_pred ceeeccCch----hHHHhHhcCCceeecccccchh-hhH--HHhhh-hhee--e-EecCC--ccCHHHHHHHHHHHhccc
Q 012613 354 GFLTHGGWN----STLESICEGVPMICQPYLGDQM-VNA--RYISH-VWRL--G-LHLDG--NVERREIEIAVRRVMIET 420 (460)
Q Consensus 354 ~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ~-~na--~~v~~-~~G~--G-~~l~~--~~~~~~l~~ai~~vl~~~ 420 (460)
++|.-.|.. ++..+ ..-+|+|.+|....-. ... --+.. --|+ + +.++. ..++..+...|-. +.|
T Consensus 70 ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d- 146 (174)
T 3kuu_A 70 VIIAGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-LHD- 146 (174)
T ss_dssp EEEEEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTC-
T ss_pred EEEEECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHc-CCC-
Confidence 388776643 33333 3468999999854221 111 11222 0143 2 22231 2445555555533 456
Q ss_pred cHHHHHHHHHHHHHHHHHhhcC
Q 012613 421 EGQEMRERILYSKEKAHLCLKP 442 (460)
Q Consensus 421 ~~~~~~~~a~~~~~~~~~~~~~ 442 (460)
+.++++.+.+++++++.+.+
T Consensus 147 --~~l~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 147 --TELAGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp --HHHHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHHHh
Confidence 68899999998888754433
No 108
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=59.80 E-value=18 Score=30.78 Aligned_cols=106 Identities=9% Similarity=0.027 Sum_probs=0.0
Q ss_pred cccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCCCCCC---CCCCCeEEEEcCCCCCCCccCcccH
Q 012613 8 CRLPRNGKRVILFPLPYQGHINPMLQIASVLYSKG--FSITIIHTNLNPLNA---CNYPHFEFHSISASLSETEASTEDM 82 (460)
Q Consensus 8 ~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~V~~~~~~~~~~~~---~~~~gi~~~~~~~~~~~~~~~~~~~ 82 (460)
.++..+++||+++.++. ||. +.+|.+++.+.+ ++|..+.+....... +...|+.+..++..--.+
T Consensus 2 ~~~~~~~~ri~vl~SG~-gsn--l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~~------- 71 (215)
T 3kcq_A 2 PGSMKKELRVGVLISGR-GSN--LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLDI------- 71 (215)
T ss_dssp -----CCEEEEEEESSC-CHH--HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBCH-------
T ss_pred CCCCCCCCEEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCCh-------
Q ss_pred HHHHHHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 83 VAILIALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.++++.+.+ . +||++|+-.+. .....+-....-.++-++++
T Consensus 72 ---------------~~~~~~L~~-----~-~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 ---------------EHISTVLRE-----H-DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ---------------HHHHHHHHH-----T-TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---------------HHHHHHHHH-----h-CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
No 109
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=59.29 E-value=9.4 Score=39.37 Aligned_cols=108 Identities=12% Similarity=0.062 Sum_probs=77.5
Q ss_pred eccChHHhhcCCCccceeeccCchhHHHhHhcCCceeecccccchhhhHHHhhhhheeeEec----CC--ccCHHHHHHH
Q 012613 339 KWAPQQEVLAHPAVGGFLTHGGWNSTLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHL----DG--NVERREIEIA 412 (460)
Q Consensus 339 ~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l----~~--~~~~~~l~~a 412 (460)
++.+-.++|..+|+ +||-- .+.+.|.+..++|+|......|+...- . .|.=..+ .. --+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~-rg~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----L-RGFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----C-CSBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----c-CCcccChhHhCCCCeECCHHHHHHH
Confidence 45566789999998 99885 468999999999999998777765431 1 1332211 11 4678899999
Q ss_pred HHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHH
Q 012613 413 VRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHI 457 (460)
Q Consensus 413 i~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (460)
|.....+. ..|+++.+++.+++.. .+.|.++++.++.+.+..
T Consensus 677 i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 677 LKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHH
T ss_pred Hhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcC
Confidence 98887631 5688888888888863 356777888888877654
No 110
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=59.00 E-value=16 Score=31.16 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=55.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCCCCCC---CCCCCCeEEEEcCC-CCCCCccCcccHHHHHHH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGF--SITIIHTNLNPLN---ACNYPHFEFHSISA-SLSETEASTEDMVAILIA 88 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh--~V~~~~~~~~~~~---~~~~~gi~~~~~~~-~~~~~~~~~~~~~~~~~~ 88 (460)
|||+|+.+|+. + -+..+.++|.+.+| +|..+.+...... .+...|+.+..++. .+. +
T Consensus 2 ~rI~vl~SG~g-~--~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~-------~------- 64 (216)
T 2ywr_A 2 LKIGVLVSGRG-S--NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFP-------S------- 64 (216)
T ss_dssp EEEEEEECSCC-H--HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSS-------S-------
T ss_pred CEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCccccc-------c-------
Confidence 68999988773 3 36778888988888 7766554311110 01113555544432 110 0
Q ss_pred HHHhcchhHH-HHHHHhhccCCCCCCCeeEEEECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 89 LNAKCVVPFW-DCLVKLTSISNVQEDSFACIITDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 89 ~~~~~~~~l~-~~l~~l~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
...+. ++++.+.+ . +||++|+-.+. .....+-....-.++-++++
T Consensus 65 -----r~~~~~~~~~~l~~-----~-~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 -----KKEFEERMALELKK-----K-GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -----HHHHHHHHHHHHHH-----T-TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -----hhhhhHHHHHHHHh-----c-CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 11122 23444444 3 89999987654 33333445555567887766
No 111
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=57.95 E-value=8.8 Score=31.70 Aligned_cols=39 Identities=8% Similarity=0.035 Sum_probs=31.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNP 54 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~ 54 (460)
+||++.-.|+.|=+ =...+.++|.++|++|.++.++...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 57888888886555 6789999999999999999887433
No 112
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=57.73 E-value=75 Score=25.75 Aligned_cols=138 Identities=15% Similarity=0.162 Sum_probs=77.5
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.|-|-+||.+ +....++....|+..|..+-+.+-+.. ..|+.+.+ |+-.. --...++
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaH--------R~p~~~~~----------~~~~a-~~~g~~V 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAH--------RTPEAMFS----------YARGA-AARGLEV 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHH----------HHHHH-HHHTCCE
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCC--------CCHHHHHH----------HHHHH-HhCCCCE
Confidence 355666678776 456778888888888988766665543 25555421 11000 0123344
Q ss_pred cceeeccCch----hHHHhHhcCCceeecccccchh--hhH-HHhhh-hhee--eE-ecCCccCHHHHHHHHHHHhcccc
Q 012613 353 GGFLTHGGWN----STLESICEGVPMICQPYLGDQM--VNA-RYISH-VWRL--GL-HLDGNVERREIEIAVRRVMIETE 421 (460)
Q Consensus 353 ~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ~--~na-~~v~~-~~G~--G~-~l~~~~~~~~l~~ai~~vl~~~~ 421 (460)
+|.-.|.. ++..+ ..-+|+|.+|...... ..+ .-+.. --|+ +. .++...++..++..|-. +.|
T Consensus 66 --iIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~-~~d-- 139 (174)
T 3lp6_A 66 --IIAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLG-AAN-- 139 (174)
T ss_dssp --EEEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHH-TTC--
T ss_pred --EEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHh-CCC--
Confidence 77776643 34433 3679999999863221 111 11111 0143 22 22234566566655543 355
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012613 422 GQEMRERILYSKEKAHL 438 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~ 438 (460)
+.++++.+.+++++++
T Consensus 140 -~~l~~kl~~~r~~~~~ 155 (174)
T 3lp6_A 140 -PQLRARIVAFQDRLAD 155 (174)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 6888888888888774
No 113
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=57.21 E-value=16 Score=28.65 Aligned_cols=37 Identities=14% Similarity=0.078 Sum_probs=31.7
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+..++++++.|+ =+.|++.++++|.++|.+|+++ ..
T Consensus 16 ~~~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 16 EKFGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp CCCSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CCCCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 3467899998887 4999999999999999999998 53
No 114
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=57.12 E-value=74 Score=25.50 Aligned_cols=138 Identities=12% Similarity=0.097 Sum_probs=76.9
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.|-|-+||.+ +....++....|+..|..+-..+-+.. .+|+.+.+- ..=.....+
T Consensus 3 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH--------R~p~~~~~~-------------~~~a~~~g~ 59 (163)
T 3ors_A 3 AMKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAH--------RTPKMMVQF-------------ASEARERGI 59 (163)
T ss_dssp CCCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHHH-------------HHHTTTTTC
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCc--------CCHHHHHHH-------------HHHHHhCCC
Confidence 355666678776 456778888888988888766665543 255554211 000111123
Q ss_pred cceeeccCch----hHHHhHhcCCceeecccccchh--hhH-HHhhh-hhee--e-EecCC--ccCHHHHHHHHHHHhcc
Q 012613 353 GGFLTHGGWN----STLESICEGVPMICQPYLGDQM--VNA-RYISH-VWRL--G-LHLDG--NVERREIEIAVRRVMIE 419 (460)
Q Consensus 353 ~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ~--~na-~~v~~-~~G~--G-~~l~~--~~~~~~l~~ai~~vl~~ 419 (460)
+.+|.-.|.. ++..+ ..-+|+|.+|....-. ..+ .-+.. --|+ + +.+++ ..++..+...|-.+ .|
T Consensus 60 ~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~d 137 (163)
T 3ors_A 60 NIIIAGAGGAAHLPGMVAS-LTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSI-QN 137 (163)
T ss_dssp CEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHHT-TC
T ss_pred cEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHhC-CC
Confidence 3388776643 44433 3679999999864321 111 11111 0144 3 22331 35555555555443 45
Q ss_pred ccHHHHHHHHHHHHHHHHH
Q 012613 420 TEGQEMRERILYSKEKAHL 438 (460)
Q Consensus 420 ~~~~~~~~~a~~~~~~~~~ 438 (460)
+.++++.+.+++++++
T Consensus 138 ---~~l~~kl~~~r~~~~~ 153 (163)
T 3ors_A 138 ---PSLVEKLNQYESSLIQ 153 (163)
T ss_dssp ---THHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHH
Confidence 5788888888888773
No 115
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=56.47 E-value=85 Score=30.70 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=24.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++|++++. +-.-.+.|++.|.+-|.+|+.+.+.
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 68888873 3334567888888899999988764
No 116
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=56.44 E-value=72 Score=25.98 Aligned_cols=113 Identities=9% Similarity=-0.017 Sum_probs=67.0
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccC-chhHHHhhcCCcee---eeccChHHhhc
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELL-PTGFVEMLDGRGHI---VKWAPQQEVLA 348 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~---~~~vp~~~ll~ 348 (460)
+++++.-.||.... ....+++.|.+.|..+-++..... ...+ ++.+ +...+.++. ..|+++.++-.
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A------~~fi~~~~l-~~l~~~v~~~~~~~~~~hi~l~~ 75 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNG------RKFINGEIL-KQFCDNYYDEFEDPFLNHVDIAN 75 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGG------GGGSCHHHH-HHHCSCEECTTTCTTCCHHHHHH
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCH------HHHhhHHHH-HHhcCCEEecCCCCccccccccc
Confidence 46777777877653 355677888877877766665543 1112 2223 222222221 13466777776
Q ss_pred CCCccceeeccCchhHH-------------HhHhcCCceeecccccc-------hhhhHHHhhhhheee
Q 012613 349 HPAVGGFLTHGGWNSTL-------------ESICEGVPMICQPYLGD-------QMVNARYISHVWRLG 397 (460)
Q Consensus 349 ~~~~~~~I~HGG~gs~~-------------eal~~GvP~v~~P~~~D-------Q~~na~~v~~~~G~G 397 (460)
.+|+ .+|.-+-.||+. -++..++|+|++|-... -..|-.++.+ +|+=
T Consensus 76 ~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ 142 (175)
T 3qjg_A 76 KHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVS 142 (175)
T ss_dssp TCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCE
T ss_pred hhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCE
Confidence 6775 567667666543 35778999999994322 1346677777 5754
No 117
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=55.91 E-value=52 Score=27.34 Aligned_cols=30 Identities=10% Similarity=0.176 Sum_probs=24.7
Q ss_pred CCCccceeeccCchhHHHhHhcCCceeeccccc
Q 012613 349 HPAVGGFLTHGGWNSTLESICEGVPMICQPYLG 381 (460)
Q Consensus 349 ~~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~ 381 (460)
.+++ +|+.||........ .++|+|-++..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3455 99999999988875 579999999864
No 118
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=55.41 E-value=84 Score=25.64 Aligned_cols=141 Identities=11% Similarity=0.122 Sum_probs=81.5
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.|-|-+||.+ +-...+.....|+.+|..+-..+-+.. ..|+.+.+- +. =.....+
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--------R~p~~l~~~----------~~---~a~~~g~ 77 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAH--------RTPDRLADY----------AR---TAAERGL 77 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHHH----------HH---HTTTTTC
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEccc--------CCHHHHHHH----------HH---HHHhCCC
Confidence 355667778876 566778888888888988766665543 255554211 00 0111112
Q ss_pred cceeeccCch----hHHHhHhcCCceeecccccc--hhhhH-HHhhh--hheeeE---ecC--CccCHHHHHHHHHHHhc
Q 012613 353 GGFLTHGGWN----STLESICEGVPMICQPYLGD--QMVNA-RYISH--VWRLGL---HLD--GNVERREIEIAVRRVMI 418 (460)
Q Consensus 353 ~~~I~HGG~g----s~~eal~~GvP~v~~P~~~D--Q~~na-~~v~~--~~G~G~---~l~--~~~~~~~l~~ai~~vl~ 418 (460)
+.+|.-.|.. ++..++ .-+|+|.+|.... ....+ .-+.. . |+.+ .++ ...++..+...|. -+.
T Consensus 78 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~ 154 (182)
T 1u11_A 78 NVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALY 154 (182)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGG
T ss_pred cEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccC
Confidence 3377766633 444443 5799999998542 12221 11222 2 5552 233 1356666666664 456
Q ss_pred cccHHHHHHHHHHHHHHHHHhhcC
Q 012613 419 ETEGQEMRERILYSKEKAHLCLKP 442 (460)
Q Consensus 419 ~~~~~~~~~~a~~~~~~~~~~~~~ 442 (460)
| ..++++.+.+++++++.+.+
T Consensus 155 d---~~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 155 N---PALAARLETWRALQTASVPN 175 (182)
T ss_dssp C---HHHHHHHHHHHHHHHHHSCS
T ss_pred C---HHHHHHHHHHHHHHHHHHHH
Confidence 6 78999999999988865544
No 119
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=55.08 E-value=37 Score=28.62 Aligned_cols=107 Identities=10% Similarity=0.045 Sum_probs=0.0
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCCCCCC---CCCCCeEEEEcCCCCCCCccCcccHHHHH
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKG--FSITIIHTNLNPLNA---CNYPHFEFHSISASLSETEASTEDMVAIL 86 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rG--h~V~~~~~~~~~~~~---~~~~gi~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
|.++||+++.++. ||. +..|.+++.+.+ ++|..+.+....... ++..|+.+..++..--..
T Consensus 5 m~~~ri~vl~SG~-gsn--l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~~~----------- 70 (209)
T 4ds3_A 5 MKRNRVVIFISGG-GSN--MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFAS----------- 70 (209)
T ss_dssp -CCEEEEEEESSC-CHH--HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGSSS-----------
T ss_pred CCCccEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccccCC-----------
Q ss_pred HHHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 87 IALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
....+..+.+.++.+ +||++|+-.+. .....+-....-.++-++++
T Consensus 71 ---r~~~d~~~~~~l~~~---------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 ---KEAHEDAILAALDVL---------KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp ---HHHHHHHHHHHHHHH---------CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred ---HHHHHHHHHHHHHhc---------CCCEEEEeccccCcCHHHHhhccCCeEEECCc
No 120
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=54.46 E-value=8 Score=29.78 Aligned_cols=33 Identities=27% Similarity=0.521 Sum_probs=24.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++|+|+++.. |.+- ..+++.|.++||+|+++..
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 3588988843 5553 4678999999999998865
No 121
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=54.24 E-value=77 Score=29.52 Aligned_cols=90 Identities=6% Similarity=-0.080 Sum_probs=55.2
Q ss_pred CceEEEEcCCCcc-CHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccCcccHHHHHHHHHHh
Q 012613 14 GKRVILFPLPYQG-HINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEASTEDMVAILIALNAK 92 (460)
Q Consensus 14 ~~~Il~~~~~~~G-H~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (460)
+..++++++|+.+ .-..+..+++.|.+.|.+|.+.+............++.+..+-
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~----------------------- 276 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEV----------------------- 276 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSC-----------------------
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCC-----------------------
Confidence 3567788888877 4555777888898889999888764322211111233222110
Q ss_pred cchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEE
Q 012613 93 CVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIIL 141 (460)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~ 141 (460)
. ...+.. +.|++|+.... ....-|-.+|+|.+.+
T Consensus 277 --~-----~~~ll~-------~~d~~v~~gG~-~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 277 --N-----HQVLFG-------RVAAVVHHGGA-GTTTAVTRAGAPQVVV 310 (404)
T ss_dssp --C-----HHHHGG-------GSSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred --C-----HHHHHh-------hCcEEEECCcH-HHHHHHHHcCCCEEEc
Confidence 0 112223 56999999764 3444666789999996
No 122
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=53.96 E-value=42 Score=32.22 Aligned_cols=90 Identities=18% Similarity=0.265 Sum_probs=54.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccCcccHHHHHHHHHHh
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEASTEDMVAILIALNAK 92 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (460)
.++|++++.-+ .-...+++.|.+.|.+|..+.+.... ....+.+..+...
T Consensus 311 ~gkrv~i~~~~-----~~~~~l~~~L~elG~~vv~v~~~~~~-------------------------~~~~~~~~~ll~~ 360 (458)
T 1mio_B 311 QGKKVALLGDP-----DEIIALSKFIIELGAIPKYVVTGTPG-------------------------MKFQKEIDAMLAE 360 (458)
T ss_dssp TTCEEEEEECH-----HHHHHHHHHHHTTTCEEEEEEESSCC-------------------------HHHHHHHHHHHHT
T ss_pred CCCEEEEEcCc-----hHHHHHHHHHHHCCCEEEEEEeCCCC-------------------------HHHHHHHHHHHHh
Confidence 36788887654 34567888888889999987764211 0111111111111
Q ss_pred c--------c-hhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEE
Q 012613 93 C--------V-VPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIIL 141 (460)
Q Consensus 93 ~--------~-~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~ 141 (460)
. . ..+.++.+.+++ . +||++|.+.. ...+|+++|||++.+
T Consensus 361 ~~~~~~~v~~~~d~~~l~~~i~~-----~-~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 361 AGIEGSKVKVEGDFFDVHQWIKN-----E-GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp TTCCSCEEEESCBHHHHHHHHHH-----S-CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred cCCCCCEEEECCCHHHHHHHHHh-----c-CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 1 0 133344444444 3 8999998864 466889999999985
No 123
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=53.91 E-value=19 Score=30.92 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=34.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+++|++..-|+.|-..-++.+|.+|+++|++|.++..+
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D 43 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVE 43 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 57788888999999999999999999999999887765
No 124
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=53.90 E-value=11 Score=23.81 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHh
Q 012613 422 GQEMRERILYSKEKAHLCLKPGGSSYQSLERLIDHIL 458 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (460)
+..++++...++.+++ ..||++.-+..+.+.|.
T Consensus 4 waefkqrlaaiktrlq----alggseaelaafekeia 36 (73)
T 2a3d_A 4 WAEFKQRLAAIKTRLQ----ALGGSEAELAAFEKEIA 36 (73)
T ss_dssp HHHHHHHHHHHHHHHH----HCSSGGGTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HhcCcHHHHHHHHHHHH
Confidence 4678999999999998 56777777776666653
No 125
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=53.65 E-value=8.8 Score=29.82 Aligned_cols=33 Identities=9% Similarity=0.070 Sum_probs=25.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++|+++.. |.+ -..+|+.|.++||+|+++-..
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 467888865 333 467899999999999988653
No 126
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=53.30 E-value=87 Score=25.16 Aligned_cols=139 Identities=10% Similarity=0.094 Sum_probs=77.4
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCcc
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVG 353 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~ 353 (460)
+.|-|-+||.+ +....++....|+..|..+-+.+-+.. ..|+.+.+ | ..-+....++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH--------Rtp~~l~~----------~---~~~~~~~g~~ 62 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAH--------RTPDKMFD----------Y---AETAKERGLK 62 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT--------TCHHHHHH----------H---HHHTTTTTCC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCc--------CCHHHHHH----------H---HHHHHhCCCc
Confidence 56677778876 456778888888888887666665543 25555421 1 1111122233
Q ss_pred ceeeccCch----hHHHhHhcCCceeecccccchh--hhH-HHhhhhh--eeeEe---cCC--ccCHHHHHHHHHHHhcc
Q 012613 354 GFLTHGGWN----STLESICEGVPMICQPYLGDQM--VNA-RYISHVW--RLGLH---LDG--NVERREIEIAVRRVMIE 419 (460)
Q Consensus 354 ~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ~--~na-~~v~~~~--G~G~~---l~~--~~~~~~l~~ai~~vl~~ 419 (460)
++|.-.|.. ++..+ ..-+|+|.+|...... ..+ .-+.. . |+++. ++. ..++..++..|-. +.|
T Consensus 63 ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~d 139 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQ-MPAGIPVATFAIGMAGAKNAALFAASILQ-HTD 139 (166)
T ss_dssp EEEEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHG-GGC
T ss_pred EEEEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhc-CCCCCceEEEecCCccchHHHHHHHHHHc-CCC
Confidence 488777743 33333 3468999999854321 111 11222 2 33322 221 2344444444433 456
Q ss_pred ccHHHHHHHHHHHHHHHHHhhc
Q 012613 420 TEGQEMRERILYSKEKAHLCLK 441 (460)
Q Consensus 420 ~~~~~~~~~a~~~~~~~~~~~~ 441 (460)
+.++++.+.+++++++.+.
T Consensus 140 ---~~l~~kl~~~r~~~~~~v~ 158 (166)
T 3oow_A 140 ---INIAKALAEFRAEQTRFVL 158 (166)
T ss_dssp ---HHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHH
Confidence 6889999999888875443
No 127
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=52.11 E-value=61 Score=31.37 Aligned_cols=93 Identities=14% Similarity=0.082 Sum_probs=51.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccCcccHHHHHHHHHHhc
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEASTEDMVAILIALNAKC 93 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (460)
++|++++..+. +. +.+++.|.+-|.+|+.+++........ ..+. ..+..+. ...
T Consensus 332 GKrv~i~~~~~--~~---~~l~~~L~ElGmevv~~gt~~~~~~d~--~~~~-----~~l~~~~--------------~i~ 385 (483)
T 3pdi_A 332 GKRVLLYTGGV--KS---WSVVSALQDLGMKVVATGTKKSTEEDK--ARIR-----ELMGDDV--------------KML 385 (483)
T ss_dssp TCEEEEECSSS--CH---HHHHHHHHHHTCEEEEECBSSSCHHHH--HHHH-----HHSCSSC--------------CBC
T ss_pred CCEEEEECCCc--hH---HHHHHHHHHCCCEEEEEecCCCCHHHH--HHHH-----HhcCCCC--------------EEE
Confidence 68898877654 43 456667777899999876642111000 0000 0000000 000
Q ss_pred -chhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEE
Q 012613 94 -VVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIIL 141 (460)
Q Consensus 94 -~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~ 141 (460)
+..+.++.+.+.+ . +||++|.... ...+|+++|||++.+
T Consensus 386 ~d~d~~el~~~i~~-----~-~pDL~ig~~~---~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 386 DEGNARVLLKTVDE-----Y-QADILIAGGR---NMYTALKGRVPFLDI 425 (483)
T ss_dssp CSCSHHHHHHHHHH-----T-TCSEEECCGG---GHHHHHHTTCCBCCC
T ss_pred eCCCHHHHHHHHHh-----c-CCCEEEECCc---hhHHHHHcCCCEEEe
Confidence 1123344444444 3 8999999754 446899999999864
No 128
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=51.07 E-value=12 Score=32.29 Aligned_cols=37 Identities=8% Similarity=-0.003 Sum_probs=32.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|||+|..-|+.|=..-...||..|+++|++|.++=..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 6788877778899999999999999999999998664
No 129
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=50.89 E-value=42 Score=27.43 Aligned_cols=44 Identities=9% Similarity=0.024 Sum_probs=29.2
Q ss_pred eeeeccChH-Hhh-cCCCccceeeccCchhHHH---hHhcCCceeecccc
Q 012613 336 HIVKWAPQQ-EVL-AHPAVGGFLTHGGWNSTLE---SICEGVPMICQPYL 380 (460)
Q Consensus 336 ~~~~~vp~~-~ll-~~~~~~~~I~HGG~gs~~e---al~~GvP~v~~P~~ 380 (460)
.+++..+.. .++ ..++. .++--||.||+-| ++..++|++++|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 344555543 333 34443 5677899998655 56799999999983
No 130
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=50.87 E-value=18 Score=31.93 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=25.7
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++|+|++.. + |.+ -..|+++|.++||+|+.++-.
T Consensus 2 ~~~~ilVtG--a-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAG--C-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEEC--C-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEEC--C-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 457888773 4 643 457899999999999998764
No 131
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=50.68 E-value=41 Score=31.06 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=49.6
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccch--hh----hccCc-hhHHHhhc-CCceee-ec---
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREA--EW----LELLP-TGFVEMLD-GRGHIV-KW--- 340 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~--~~----~~~l~-~~~~~~~~-~~~~~~-~~--- 340 (460)
+++++.+-||-+... -...++++|.+.|.++.|+......+.. .. ...+| .++..+.. .+.... .+
T Consensus 3 ~~i~i~~GGTgGHi~--palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVF--PALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS 80 (365)
T ss_dssp CEEEEECCSSHHHHH--HHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHH
T ss_pred CcEEEEcCCCHHHHH--HHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH
Confidence 356666666543211 1245788998889999988765432110 00 00111 11100000 000000 00
Q ss_pred cCh-HHhhc--CCCccceeeccCchhH---HHhHhcCCceeec
Q 012613 341 APQ-QEVLA--HPAVGGFLTHGGWNST---LESICEGVPMICQ 377 (460)
Q Consensus 341 vp~-~~ll~--~~~~~~~I~HGG~gs~---~eal~~GvP~v~~ 377 (460)
+.+ ..++. +||+ +|++||+-+. ..|-..|+|+++.
T Consensus 81 ~~~~~~~l~~~~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 81 LFQALRVIRQLRPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHHHHHHCCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 011 12333 6777 9999998764 5567789999963
No 132
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=50.54 E-value=1e+02 Score=25.18 Aligned_cols=138 Identities=12% Similarity=0.097 Sum_probs=78.6
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
-|.|-|-+||.+ +....++....|+..|.++-..+-+.. .+|+.+.+-. . =.....+
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--------R~p~~l~~~~----------~---~a~~~g~ 69 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAH--------RTPDRMFEYA----------K---NAEERGI 69 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTT--------TCHHHHHHHH----------H---HTTTTTC
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEccc--------CCHHHHHHHH----------H---HHHhCCC
Confidence 367888888887 566778888888888988766665543 2555542110 0 0111112
Q ss_pred cceeeccCch----hHHHhHhcCCceeecccccc--hhhhH-HHhhhhh--eeeE---ecCCccCHHHHHHHHHHHhccc
Q 012613 353 GGFLTHGGWN----STLESICEGVPMICQPYLGD--QMVNA-RYISHVW--RLGL---HLDGNVERREIEIAVRRVMIET 420 (460)
Q Consensus 353 ~~~I~HGG~g----s~~eal~~GvP~v~~P~~~D--Q~~na-~~v~~~~--G~G~---~l~~~~~~~~l~~ai~~vl~~~ 420 (460)
+++|.=.|.. ++..++ .-+|+|.+|.... ....+ --+.. . |+.+ .++...++..++..|. -+.|
T Consensus 70 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d- 145 (183)
T 1o4v_A 70 EVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKY- 145 (183)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTC-
T ss_pred cEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCC-
Confidence 3377766632 444443 7789999998542 22222 12233 3 5332 1222456666666664 4456
Q ss_pred cHHHHHHHHHHHHHHHHHh
Q 012613 421 EGQEMRERILYSKEKAHLC 439 (460)
Q Consensus 421 ~~~~~~~~a~~~~~~~~~~ 439 (460)
+.++++.+..++++++.
T Consensus 146 --~~l~~kL~~~r~~~~~~ 162 (183)
T 1o4v_A 146 --PEIARKVKEYKERMKRE 162 (183)
T ss_dssp --HHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 67788877777777643
No 133
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=50.33 E-value=28 Score=33.86 Aligned_cols=93 Identities=10% Similarity=0.054 Sum_probs=52.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccCcccHHHHHHHHHHhc
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEASTEDMVAILIALNAKC 93 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (460)
++|++++..+. | .+.+++.|.+-|.+|..+++...... .+ ..+...+..+. ...
T Consensus 348 GKrv~i~g~~~--~---~~~la~~L~ElGm~vv~~gt~~~~~~-----d~--~~l~~~~~~~~--------------~i~ 401 (492)
T 3u7q_A 348 GKRVMLYIGGL--R---PRHVIGAYEDLGMEVVGTGYEFAHND-----DY--DRTMKEMGDST--------------LLY 401 (492)
T ss_dssp TCEEEECBSSS--H---HHHTHHHHHTTTCEEEEEEESSCCHH-----HH--HHHHTTSCTTC--------------EEE
T ss_pred CCEEEEECCCc--h---HHHHHHHHHHCCCEEEEEeCCCCCHH-----HH--HHHHHhCCCCc--------------EEE
Confidence 57888865543 3 45677788888999998777532110 00 00000011000 000
Q ss_pred -chhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEE
Q 012613 94 -VVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIIL 141 (460)
Q Consensus 94 -~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~ 141 (460)
...+.++.+.+.+ . +||++|... ....+|+++|||++.+
T Consensus 402 ~~~d~~el~~~i~~-----~-~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 402 DDVTGYEFEEFVKR-----I-KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp ESCBHHHHHHHHHH-----H-CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred cCCCHHHHHHHHHh-----c-CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 0113333333333 2 899999974 3567999999999964
No 134
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=50.30 E-value=70 Score=31.39 Aligned_cols=36 Identities=17% Similarity=0.125 Sum_probs=25.7
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLN 53 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~ 53 (460)
.+++++++..+. + .+.+++.|.+.|.+|..+++...
T Consensus 334 ~GKrv~i~~~~~--~---~~~l~~~l~ElGm~vv~~~t~~~ 369 (533)
T 1mio_A 334 QGKTACLYVGGS--R---SHTYMNMLKSFGVDSLVAGFEFA 369 (533)
T ss_dssp TTCEEEEEESSS--H---HHHHHHHHHHHTCEEEEEEESSC
T ss_pred CCCEEEEECCch--H---HHHHHHHHHHCCCEEEEEEeccC
Confidence 467888876554 3 45566677777999999887644
No 135
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=49.45 E-value=13 Score=33.74 Aligned_cols=24 Identities=8% Similarity=0.164 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCC
Q 012613 30 PMLQIASVLYSKGFSITIIHTNLN 53 (460)
Q Consensus 30 p~~~La~~L~~rGh~V~~~~~~~~ 53 (460)
.-..+|+++..+|++|++++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 556789999999999999998744
No 136
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=49.21 E-value=25 Score=27.72 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=25.5
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+++|+++..|..| ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 6889988654333 56889999999999998764
No 137
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=48.46 E-value=40 Score=26.06 Aligned_cols=62 Identities=15% Similarity=-0.005 Sum_probs=40.3
Q ss_pred cCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETEGQEMRERILYSKEKA 436 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~ 436 (460)
..+|+|++--..+.. ......+ .|+--.+.+.++.+.|..+|++++.. ..+++..+++++..
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~ 135 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK---RRLVMENRSLRRAA 135 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 478988886555533 3444445 37655666678999999999999977 44444444444443
No 138
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=48.03 E-value=19 Score=32.91 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=28.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+||.|+-.++.| |-.+|+-|+++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 5789999999877 56799999999999998533
No 139
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=47.95 E-value=10 Score=29.55 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=26.9
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++||+++.+|..| ..+|+.|.++||+|+++-..
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 5789988776544 57899999999999998774
No 140
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=47.89 E-value=23 Score=28.46 Aligned_cols=40 Identities=20% Similarity=0.284 Sum_probs=32.1
Q ss_pred CCCceEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQ---GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++.+|+++|.=+. --..+...|++.|.++|.+|.|..+|
T Consensus 21 ~~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 21 KNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp HTCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HhCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 45788888874322 34578999999999999999999987
No 141
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=47.23 E-value=24 Score=32.24 Aligned_cols=40 Identities=10% Similarity=0.012 Sum_probs=23.8
Q ss_pred cccccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 6 ESCRLPRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 6 ~~~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++|-.-+.+|||+|+. + -+-...+.++|.++||+|..+.+
T Consensus 14 ~~~~~~~~~mrIvf~G--~---~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 14 GTENLYFQSMKIAVIG--Q---SLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -------CCCEEEEEC--C---HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccccccCCCCEEEEEc--C---cHHHHHHHHHHHHCCCeEEEEEe
Confidence 4555556679999993 1 23334567899999999986654
No 142
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=46.25 E-value=1.2e+02 Score=24.76 Aligned_cols=105 Identities=17% Similarity=0.115 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHH
Q 012613 286 IDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTL 365 (460)
Q Consensus 286 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~ 365 (460)
-.++.+..+.+..++.+.+++++..+.. ..||.-+.....--++-+. .+.+ +-+|..+.+
T Consensus 52 R~p~~l~~~~~~a~~~g~~ViIa~AG~a-------a~LpgvvA~~t~~PVIgVP----------~~~~---~l~G~dsLl 111 (183)
T 1o4v_A 52 RTPDRMFEYAKNAEERGIEVIIAGAGGA-------AHLPGMVASITHLPVIGVP----------VKTS---TLNGLDSLF 111 (183)
T ss_dssp TCHHHHHHHHHHTTTTTCCEEEEEEESS-------CCHHHHHHHHCSSCEEEEE----------ECCT---TTTTHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEecCcc-------cccHHHHHhccCCCEEEee----------CCCC---CCCcHHHHH
Confidence 3566777777777777788887766542 3366544322211122121 0111 347888888
Q ss_pred HhHhc--CCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcc
Q 012613 366 ESICE--GVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIE 419 (460)
Q Consensus 366 eal~~--GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 419 (460)
..+.. |+| +.-+..|-..||..+.-. .+ .++...|.+++++--.+
T Consensus 112 SivqmP~Gvp--VatV~Id~~~nAa~lAaq-----Il--a~~d~~l~~kL~~~r~~ 158 (183)
T 1o4v_A 112 SIVQMPGGVP--VATVAINNAKNAGILAAS-----IL--GIKYPEIARKVKEYKER 158 (183)
T ss_dssp HHHTCCTTCC--CEECCTTCHHHHHHHHHH-----HH--HTTCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCe--eEEEecCCchHHHHHHHH-----HH--hcCCHHHHHHHHHHHHH
Confidence 88888 999 444556788899877764 12 24556777777666544
No 143
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=46.22 E-value=13 Score=34.68 Aligned_cols=29 Identities=24% Similarity=0.230 Sum_probs=25.0
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITII 48 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~ 48 (460)
|||+|+-.|-.| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 789999777555 78899999999999997
No 144
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=45.24 E-value=15 Score=33.83 Aligned_cols=34 Identities=24% Similarity=0.180 Sum_probs=25.7
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+.|+|+++..|..| ..+|..|++.||+|+++..
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 345899999776655 3578889999999998754
No 145
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=44.55 E-value=1.3e+02 Score=29.36 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=25.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++|++++. +-.-.+.|++.|.+.|.+|..+...
T Consensus 359 ~Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~ 392 (519)
T 1qgu_B 359 HGKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSH 392 (519)
T ss_dssp TTCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeC
Confidence 367888884 3334667888888899999987764
No 146
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=44.50 E-value=15 Score=32.94 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=25.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|+|+|+..|..| ..+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4799999776655 4678999999999998865
No 147
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=44.40 E-value=19 Score=24.59 Aligned_cols=50 Identities=14% Similarity=0.059 Sum_probs=32.9
Q ss_pred hcCCceeecccccchhh-hHHHhhhh-heeeEecCCccCHHHHHHHHHHHhc
Q 012613 369 CEGVPMICQPYLGDQMV-NARYISHV-WRLGLHLDGNVERREIEIAVRRVMI 418 (460)
Q Consensus 369 ~~GvP~v~~P~~~DQ~~-na~~v~~~-~G~G~~l~~~~~~~~l~~ai~~vl~ 418 (460)
-.|+|+|++--.+.|-+ |--.-+.+ -|+.-.+-+...++++...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 46889999888777755 33333332 1444444347789999999888874
No 148
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=44.19 E-value=14 Score=33.75 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=27.7
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.|||+++-.|+.| ..+|..|++.||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 35899999877765 46789999999999998763
No 149
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=43.91 E-value=74 Score=25.85 Aligned_cols=34 Identities=18% Similarity=0.367 Sum_probs=24.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.|+|++. |+.|.+ -..++++|.++||+|+.++..
T Consensus 3 ~~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 3 VKKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 3677665 333433 467899999999999998764
No 150
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=43.77 E-value=61 Score=29.02 Aligned_cols=81 Identities=15% Similarity=0.048 Sum_probs=46.7
Q ss_pred EEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccc
Q 012613 275 VIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGG 354 (460)
Q Consensus 275 vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~ 354 (460)
.++++--|-.....+....+...|++.+..+.+.......+. ..+. .++....++
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a--------~~~~---------------~~~~~~~d~-- 66 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDA--------TKYC---------------QEFASKVDL-- 66 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHH--------HHHH---------------HHHTTTCSE--
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchH--------HHHH---------------HHhhcCCCE--
Confidence 444444332222234556677778777777666544322100 1110 011123455
Q ss_pred eeeccCchhHHHhHh------cCCceeecccc
Q 012613 355 FLTHGGWNSTLESIC------EGVPMICQPYL 380 (460)
Q Consensus 355 ~I~HGG~gs~~eal~------~GvP~v~~P~~ 380 (460)
+|.-||-||+.|++. .++|+.++|..
T Consensus 67 vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999999999864 57999999973
No 151
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=43.65 E-value=7.1 Score=37.77 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=28.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.|||+++..|-.| ..||+.|.+.||+|+++=..
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 57999999887655 46999999999999998654
No 152
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=43.24 E-value=26 Score=31.82 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=27.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+|.|+-.|..| ..+|+.|++.||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 35799999888777 6789999999999998754
No 153
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=43.15 E-value=22 Score=33.20 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=29.6
Q ss_pred CCceEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQG-H---INPMLQIASVL-YSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~G-H---~~p~~~La~~L-~~rGh~V~~~~~ 50 (460)
++|||+++..|..+ | +.....++++| .++||+|+.+-.
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 47899998776554 3 34578999999 999999998864
No 154
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.13 E-value=28 Score=29.02 Aligned_cols=44 Identities=14% Similarity=0.076 Sum_probs=34.8
Q ss_pred hhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCccHH
Q 012613 95 VPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTSSVS 147 (460)
Q Consensus 95 ~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~~~~ 147 (460)
..+.+.++++++ . +.|+||.+. .+..+|+++|+|.+.+.++..+
T Consensus 129 ~e~~~~i~~l~~-----~-G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKT-----E-NIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHH-----T-TCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHH-----C-CCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 456678888877 5 899999984 4678999999999998775443
No 155
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=42.64 E-value=57 Score=30.10 Aligned_cols=36 Identities=14% Similarity=0.181 Sum_probs=26.2
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcC
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRP 311 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (460)
+++++++|+.+. ...+..++++|.+.|.++.+.++.
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcCH
Confidence 678888876542 334566888998889998887753
No 156
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=42.17 E-value=23 Score=32.09 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=27.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+|+|+++..+ ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 5789998876 5678999999999999988764
No 157
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=41.97 E-value=35 Score=29.62 Aligned_cols=46 Identities=17% Similarity=0.037 Sum_probs=26.4
Q ss_pred CcccccccccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 1 METKQESCRLPRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 1 ~~~~~~~~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|++.+.+.....++++ ++++.++ |- --..++++|+++|++|+++..
T Consensus 1 ~~~~~~~~~~~l~~k~-vlITGas-gg--iG~~la~~l~~~G~~V~~~~r 46 (266)
T 1xq1_A 1 MAGAEQSQRWSLKAKT-VLVTGGT-KG--IGHAIVEEFAGFGAVIHTCAR 46 (266)
T ss_dssp ------CCTTCCTTCE-EEETTTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCccccCCCCCCCCCE-EEEECCC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 4444444544444444 4555444 32 346789999999999998765
No 158
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=41.88 E-value=13 Score=33.75 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=24.5
Q ss_pred hhcCCCccceeeccCchhHHHhHhc----CCceeeccc
Q 012613 346 VLAHPAVGGFLTHGGWNSTLESICE----GVPMICQPY 379 (460)
Q Consensus 346 ll~~~~~~~~I~HGG~gs~~eal~~----GvP~v~~P~ 379 (460)
....+|+ +|.-||-||+.+++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3445666 9999999999999864 899999984
No 159
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=41.82 E-value=14 Score=33.18 Aligned_cols=32 Identities=13% Similarity=0.108 Sum_probs=26.0
Q ss_pred hhcCCCccceeeccCchhHHHhHhc----CCceeeccc
Q 012613 346 VLAHPAVGGFLTHGGWNSTLESICE----GVPMICQPY 379 (460)
Q Consensus 346 ll~~~~~~~~I~HGG~gs~~eal~~----GvP~v~~P~ 379 (460)
+-..+|+ +|.-||=||+.+++.. ++|+++++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3345676 9999999999999853 899999984
No 160
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=41.49 E-value=30 Score=28.46 Aligned_cols=39 Identities=21% Similarity=0.268 Sum_probs=31.6
Q ss_pred CCceEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQ---GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.+|+++|.=+. --..+...|++.|.++|.+|.|..+|
T Consensus 45 ~A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 45 NASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp HCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hCCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 4688888885322 34578899999999999999999887
No 161
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=41.31 E-value=26 Score=34.75 Aligned_cols=39 Identities=10% Similarity=0.074 Sum_probs=36.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.+|++.+.++-.|-....-++..|..+|++|+.++..
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 478999999999999999999999999999999998775
No 162
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=41.14 E-value=30 Score=27.58 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=31.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+..++++++.|+ | +.|++.+++.|.++|.+|+++ ..
T Consensus 22 ~~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~ 57 (158)
T 3lrx_A 22 KFGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HV 57 (158)
T ss_dssp CCSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EE
T ss_pred CCCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 467899998887 3 999999999999999999998 54
No 163
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=41.10 E-value=1.6e+02 Score=24.57 Aligned_cols=142 Identities=12% Similarity=-0.035 Sum_probs=77.7
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCch----hHHHhhcCCceeeec--cChHH
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPT----GFVEMLDGRGHIVKW--APQQE 345 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~--vp~~~ 345 (460)
++++++.-.||.... +....+++.|.+.|..+-++.+.....-.. .....+ .+ +...++-.+.++ +++.+
T Consensus 7 ~k~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~-~~~~~~~~~~~l-~~l~g~~v~~~~~~~~hi~ 82 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQTTDT-KFGESSEWINKI-KQITEEPIVDSMVKAEPFG 82 (201)
T ss_dssp TCEEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCCTTC-CTTCSCHHHHHH-HHHCCSCCBCSHHHHGGGT
T ss_pred CCEEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHHHHH-HhhchhHHHHHH-HHHhCCCeEeecCcccccc
Confidence 456777777876542 134556666766677766665544311000 000011 12 122222222221 23333
Q ss_pred hhcCCCccceeeccCchhHH----------------HhHhcCCceeeccc----ccchhhhHHHhhhhheeeEecCC---
Q 012613 346 VLAHPAVGGFLTHGGWNSTL----------------ESICEGVPMICQPY----LGDQMVNARYISHVWRLGLHLDG--- 402 (460)
Q Consensus 346 ll~~~~~~~~I~HGG~gs~~----------------eal~~GvP~v~~P~----~~DQ~~na~~v~~~~G~G~~l~~--- 402 (460)
+-..+|+ .+|.-+-+||+. .++..+.|+|++|- ....+.|..++.+ +|+=+....
T Consensus 83 ~s~~aD~-mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~ 160 (201)
T 3lqk_A 83 PKTPLDC-MVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQD 160 (201)
T ss_dssp TTSCCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEES
T ss_pred cccccCE-EEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCcc
Confidence 3344454 466666665433 23567999999985 4566679999998 686544321
Q ss_pred ---------ccCHHHHHHHHHHHhcc
Q 012613 403 ---------NVERREIEIAVRRVMIE 419 (460)
Q Consensus 403 ---------~~~~~~l~~ai~~vl~~ 419 (460)
-.+.+.|.+.|.++|++
T Consensus 161 ~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 161 NPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp CTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred ccccCCCcccCCHHHHHHHHHHHHhc
Confidence 13447888899998876
No 164
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=41.01 E-value=99 Score=25.61 Aligned_cols=135 Identities=10% Similarity=-0.017 Sum_probs=76.7
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccC-chhHHHhhcCCceeee-----ccChHHh
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELL-PTGFVEMLDGRGHIVK-----WAPQQEV 346 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~-----~vp~~~l 346 (460)
+++++.-.||.... ....+++.|.+.|..+-++..... ...+ +..+ +...++++.-- .+.+.++
T Consensus 9 k~IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~A------~~fi~~~~~-~~l~~~v~~~~~~~~~~~~hi~l 78 (194)
T 1p3y_1 9 KKLLIGICGSISSV---GISSYLLYFKSFFKEIRVVMTKTA------EDLIPAHTV-SYFCDHVYSEHGENGKRHSHVEI 78 (194)
T ss_dssp CEEEEEECSCGGGG---GTHHHHHHHTTTSSEEEEEECHHH------HHHSCHHHH-GGGSSEEECTTCSSSCCCCHHHH
T ss_pred CEEEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchhH------HHHHHHHHH-HHhcCCEeccccccCCCcCcccc
Confidence 46777777877652 345566777776776655554332 1111 2222 23333311111 2446666
Q ss_pred hcCCCccceeeccCchhHHH-------------hHhcCCceeecccccc----h---hhhHHHhhhhheeeEecCC-c--
Q 012613 347 LAHPAVGGFLTHGGWNSTLE-------------SICEGVPMICQPYLGD----Q---MVNARYISHVWRLGLHLDG-N-- 403 (460)
Q Consensus 347 l~~~~~~~~I~HGG~gs~~e-------------al~~GvP~v~~P~~~D----Q---~~na~~v~~~~G~G~~l~~-~-- 403 (460)
...+|+ .+|.-+-.||+.. ++..++|+|++|-..+ . ..|-.++.+ +|+=+.-.. .
T Consensus 79 ~~~aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~iv~p~~g~~ 156 (194)
T 1p3y_1 79 GRWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRK-DGHIVIEPVEIMA 156 (194)
T ss_dssp HHHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHH-HTCEECCCBCCC-
T ss_pred cccCCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHH-CCCEEECCCCCcc
Confidence 666665 5677676665432 3668999999995322 1 446777777 576433211 2
Q ss_pred --------------cCHHHHHHHHHHHhcc
Q 012613 404 --------------VERREIEIAVRRVMIE 419 (460)
Q Consensus 404 --------------~~~~~l~~ai~~vl~~ 419 (460)
.+.++|.+.+.+.+.+
T Consensus 157 f~lacg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 157 FEIATGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp -----------CBCCCHHHHHHHHHHHCC-
T ss_pred cccccCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 3678888888888865
No 165
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=40.96 E-value=31 Score=28.49 Aligned_cols=39 Identities=13% Similarity=0.144 Sum_probs=31.7
Q ss_pred CCceEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQ---GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.+|+++|.=+. --..+...|++.|.++|.+|.|..+|
T Consensus 44 ~A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 44 EANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp HCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hCCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 4688888885322 34678899999999999999999987
No 166
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=40.90 E-value=45 Score=30.42 Aligned_cols=72 Identities=11% Similarity=0.140 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHH
Q 012613 287 DETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLE 366 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~e 366 (460)
+.+....+.+++.+...+.||.+.++... . ++.++++...+-++|.. ||=.+-..+.+-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-----------~--------rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 121 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYNS-----------N--------GLLKYLDYDLIRENPKF--FCGYSDITALNN 121 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG-----------G--------GGGGGCCHHHHHTSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH-----------H--------HHHhhcChhHHHhCCeE--EEEecchHHHHH
Confidence 44567779999998888999988775411 1 34444555555555555 666666655555
Q ss_pred hHh--cCCceeeccc
Q 012613 367 SIC--EGVPMICQPY 379 (460)
Q Consensus 367 al~--~GvP~v~~P~ 379 (460)
+++ .|++.+-=|+
T Consensus 122 al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 122 AIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhhCCcEEEccc
Confidence 555 3555555444
No 167
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=40.86 E-value=19 Score=31.02 Aligned_cols=33 Identities=27% Similarity=0.272 Sum_probs=27.5
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
..|+|.|+..|..|- .||+.|+++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 468999999998874 589999999999887654
No 168
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=40.62 E-value=30 Score=29.65 Aligned_cols=29 Identities=24% Similarity=0.230 Sum_probs=24.5
Q ss_pred CCccceeeccCchhHHHhHhcCCceeeccccc
Q 012613 350 PAVGGFLTHGGWNSTLESICEGVPMICQPYLG 381 (460)
Q Consensus 350 ~~~~~~I~HGG~gs~~eal~~GvP~v~~P~~~ 381 (460)
+++ +|+.||.......- .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 566 99999999988875 579999999853
No 169
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=40.61 E-value=33 Score=27.65 Aligned_cols=39 Identities=21% Similarity=0.223 Sum_probs=31.7
Q ss_pred CCceEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQ---GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.+|+++|.=+. --..+...|++.|.++|.+|.|..+|
T Consensus 29 ~A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 29 NSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp HCSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4688888884322 34578999999999999999999987
No 170
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=39.89 E-value=34 Score=29.25 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhCCCeEEEEeCC
Q 012613 30 PMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 30 p~~~La~~L~~rGh~V~~~~~~ 51 (460)
--..+|++|+++|++|+++..+
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEECC
Confidence 4568899999999999998765
No 171
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=39.71 E-value=93 Score=28.20 Aligned_cols=68 Identities=12% Similarity=-0.069 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhH
Q 012613 289 TEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESI 368 (460)
Q Consensus 289 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal 368 (460)
+....+.+.|++.+..+.+.......+ . ..+ -...+-..+++ +|.-||=||+.|++
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~~~~-------~-~~~--------------~~~~~~~~~d~--vvv~GGDGTl~~v~ 99 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWEKGD-------A-ARY--------------VEEARKFGVAT--VIAGGGDGTINEVS 99 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCSTTH-------H-HHH--------------HHHHHHHTCSE--EEEEESHHHHHHHH
T ss_pred chHHHHHHHHHHcCCcEEEEEecCcch-------H-HHH--------------HHHHHhcCCCE--EEEEccchHHHHHH
Confidence 455678888888887776654432100 0 111 01122234566 99999999999985
Q ss_pred --------hcCCceeecccc
Q 012613 369 --------CEGVPMICQPYL 380 (460)
Q Consensus 369 --------~~GvP~v~~P~~ 380 (460)
..++|+.++|..
T Consensus 100 ~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 100 TALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HHHHHCCSSCCCEEEEEECS
T ss_pred HHHhhcccCCCCeEEEecCc
Confidence 357899999973
No 172
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=39.69 E-value=1.5e+02 Score=23.90 Aligned_cols=139 Identities=14% Similarity=0.138 Sum_probs=76.5
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.|-|-+||.+ +....++....|+..|..+-+.+-+.. ..|+.+.+ |+... --...++
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH--------R~p~~~~~----------~~~~a-~~~g~~V 64 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAH--------RTPKETVE----------FVENA-DNRGCAV 64 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHH----------HHHHH-HHTTEEE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEccc--------CCHHHHHH----------HHHHH-HhCCCcE
Confidence 356677778876 456778888888998988776666543 25554421 11100 0012334
Q ss_pred cceeeccCchhHHHh---HhcCCceeecccccchh-hhHHH--hhh-hheee---EecCC--ccCHHHHHHHHHHHhccc
Q 012613 353 GGFLTHGGWNSTLES---ICEGVPMICQPYLGDQM-VNARY--ISH-VWRLG---LHLDG--NVERREIEIAVRRVMIET 420 (460)
Q Consensus 353 ~~~I~HGG~gs~~ea---l~~GvP~v~~P~~~DQ~-~na~~--v~~-~~G~G---~~l~~--~~~~~~l~~ai~~vl~~~ 420 (460)
+|.-.|...-+-. -..-+|+|.+|...-.. ..... +.. --|+. +.++. ..++..+...|-. +.|
T Consensus 65 --iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d- 140 (169)
T 3trh_A 65 --FIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIA-LQD- 140 (169)
T ss_dssp --EEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTC-
T ss_pred --EEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHc-CCC-
Confidence 8877764322222 23468999999864222 11211 222 01432 22231 2455555554433 456
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 012613 421 EGQEMRERILYSKEKAHL 438 (460)
Q Consensus 421 ~~~~~~~~a~~~~~~~~~ 438 (460)
+.++++.+.+++++++
T Consensus 141 --~~l~~kl~~~r~~~~~ 156 (169)
T 3trh_A 141 --KSIAQKLVQQRTAKRE 156 (169)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHH
Confidence 6888888888888773
No 173
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=39.42 E-value=1.8e+02 Score=27.79 Aligned_cols=146 Identities=10% Similarity=0.011 Sum_probs=76.8
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhc-CCceeeeccChHHhhcCC
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLD-GRGHIVKWAPQQEVLAHP 350 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~vp~~~ll~~~ 350 (460)
++++++|..|..+ ...++.|.+.|.++.++.... .+.+.+... .++.+..---..+.|..+
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~-----------~~~~~~l~~~~~i~~~~~~~~~~~l~~~ 73 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF-----------IPQFTVWANEGMLTLVEGPFDETLLDSC 73 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC-----------CHHHHHHHTTTSCEEEESSCCGGGGTTC
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC-----------CHHHHHHHhcCCEEEEECCCCccccCCc
Confidence 5788888887654 345566666787776665432 122222111 233333221223445566
Q ss_pred CccceeeccCchh-----HHHhHhcCCceee--cccccchhhhHHHhhhh-heeeEecCC--ccCHHHHHHHHHHHhccc
Q 012613 351 AVGGFLTHGGWNS-----TLESICEGVPMIC--QPYLGDQMVNARYISHV-WRLGLHLDG--NVERREIEIAVRRVMIET 420 (460)
Q Consensus 351 ~~~~~I~HGG~gs-----~~eal~~GvP~v~--~P~~~DQ~~na~~v~~~-~G~G~~l~~--~~~~~~l~~ai~~vl~~~ 420 (460)
++ +|.--|.-. ..+|-..|+|+-+ -|-..|...-| .+.+. +-+|+.-.. ..-+..|++.|.+.+.+.
T Consensus 74 ~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~~ 150 (457)
T 1pjq_A 74 WL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQH 150 (457)
T ss_dssp SE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTT
T ss_pred cE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEECCCCChHHHHHHHHHHHHhcchh
Confidence 66 777777653 4456667888633 23323222100 00121 234554333 233678888888888652
Q ss_pred cHHHHHHHHHHHHHHHHHh
Q 012613 421 EGQEMRERILYSKEKAHLC 439 (460)
Q Consensus 421 ~~~~~~~~a~~~~~~~~~~ 439 (460)
- ..+-+.+.++++++++.
T Consensus 151 ~-~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 151 L-GQVARYAGQLRARVKKQ 168 (457)
T ss_dssp H-HHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHhh
Confidence 2 35666677777777653
No 174
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=39.27 E-value=48 Score=28.67 Aligned_cols=38 Identities=18% Similarity=0.418 Sum_probs=27.8
Q ss_pred CceEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQG-----------HINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~G-----------H~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+||+++.....+ ...=+......|.+.|++|+++++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3678877765322 2356777788899999999999985
No 175
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=39.21 E-value=70 Score=23.98 Aligned_cols=49 Identities=10% Similarity=-0.069 Sum_probs=32.7
Q ss_pred cCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcc
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 419 (460)
..+|+|++--..|.......+.. .|+--.+.+.++.++|..+|++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLTKPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhccCCCCHHHHHHHHHHHHHH
Confidence 45788877655554444444444 25544455568999999999999876
No 176
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=39.11 E-value=42 Score=25.62 Aligned_cols=34 Identities=15% Similarity=0.127 Sum_probs=24.8
Q ss_pred EEEcCCCc--cCHHHHHHHHHHHHhCCCeE-EEEeCC
Q 012613 18 ILFPLPYQ--GHINPMLQIASVLYSKGFSI-TIIHTN 51 (460)
Q Consensus 18 l~~~~~~~--GH~~p~~~La~~L~~rGh~V-~~~~~~ 51 (460)
+++..+.+ ......+.+|..+.+.||+| .++-..
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 33444434 34677899999999999999 887665
No 177
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=38.61 E-value=33 Score=29.32 Aligned_cols=38 Identities=8% Similarity=0.017 Sum_probs=30.0
Q ss_pred CCceEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLP--YQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~--~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++|+.+|++.. +.|-..-...|++.|+++|++|.++-+
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 45665555543 559999999999999999999999754
No 178
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=38.40 E-value=67 Score=27.77 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=25.8
Q ss_pred ceEEEEcCCCccCH-HHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHI-NPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~-~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|||+++-.-+.-++ ..+...++.++.-|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 68877776666555 46667888777667777776654
No 179
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=38.25 E-value=60 Score=29.58 Aligned_cols=82 Identities=12% Similarity=-0.032 Sum_probs=46.5
Q ss_pred EEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccc
Q 012613 275 VIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGG 354 (460)
Q Consensus 275 vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~ 354 (460)
.|+++-.|-.....+....+.+.|++.+..+.+.......+. ..+ -.......+++
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a--------~~~--------------~~~~~~~~~d~-- 83 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDA--------TLE--------------AERAMHENYDV-- 83 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHH--------HHH--------------HHHHTTTTCSE--
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchH--------HHH--------------HHHHhhcCCCE--
Confidence 444443333222234566788888887766655543221000 111 01112223455
Q ss_pred eeeccCchhHHHhHh------cCCceeecccc
Q 012613 355 FLTHGGWNSTLESIC------EGVPMICQPYL 380 (460)
Q Consensus 355 ~I~HGG~gs~~eal~------~GvP~v~~P~~ 380 (460)
+|.-||=||+.|++. .++|+.++|..
T Consensus 84 vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 84 LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 999999999999863 47899999973
No 180
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=38.19 E-value=31 Score=30.07 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=29.9
Q ss_pred ccCCCCceEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 9 RLPRNGKRVILFPL--PYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 9 ~~~~~~~~Il~~~~--~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+..++++++.+.. |+.|=..-...||..|+ +|++|.++-..
T Consensus 21 ~~~~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 21 SMDNKKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -----CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred cCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 34445667766654 46689999999999999 99999998654
No 181
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=37.98 E-value=20 Score=32.84 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=28.1
Q ss_pred CCceEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHI----NPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~----~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+++||+++..|..+-. .....++++|.+.||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 4788888876543322 2567889999999999998764
No 182
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=37.88 E-value=44 Score=26.15 Aligned_cols=37 Identities=16% Similarity=0.169 Sum_probs=30.1
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+-.+++..+..-.+.+.+.+|...++.|++|+++.+.
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 3445555666788999999999999999999998875
No 183
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=37.65 E-value=23 Score=31.28 Aligned_cols=32 Identities=9% Similarity=0.059 Sum_probs=25.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|||+|+-.|..| ..+|..|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 578888776655 47899999999999998653
No 184
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=37.65 E-value=43 Score=30.39 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=25.4
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|++|||+|+..+.. .....++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 56899999987743 345668888899999876663
No 185
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=37.64 E-value=23 Score=32.80 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=28.7
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+..|||.|+-.|..| ..+|..|++.||+|++....
T Consensus 27 ~~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 346899999888765 46899999999999998764
No 186
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=37.64 E-value=23 Score=32.10 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=25.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITII 48 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~ 48 (460)
..|||+++..|+.| ..+|..|++.||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46899999888766 56788999999999998
No 187
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=37.54 E-value=1.5e+02 Score=23.53 Aligned_cols=136 Identities=10% Similarity=0.045 Sum_probs=75.7
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCC-Cc
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHP-AV 352 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~-~~ 352 (460)
+.|-|-+||.+ +....++....|+..|..+-..+-+.. .+|+.+.+ |+.. .... ..
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saH--------R~p~~~~~----------~~~~---a~~~~~~ 59 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAH--------KTAEHVVS----------MLKE---YEALDRP 59 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT--------TCHHHHHH----------HHHH---HHTSCSC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEccc--------CCHHHHHH----------HHHH---hhhcCCC
Confidence 45666678776 456778888888888887766665543 25555421 1111 1111 23
Q ss_pred cceeeccCch----hHHHhHhcCCceeecccccchh-hh-HHHhhhhh--eeeEe-cCCccCHHHHHHHHHHHhccccHH
Q 012613 353 GGFLTHGGWN----STLESICEGVPMICQPYLGDQM-VN-ARYISHVW--RLGLH-LDGNVERREIEIAVRRVMIETEGQ 423 (460)
Q Consensus 353 ~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ~-~n-a~~v~~~~--G~G~~-l~~~~~~~~l~~ai~~vl~~~~~~ 423 (460)
+++|.-.|.. ++..+ ..-+|+|.+|...-.. .. -.-+.. . |+.+. ++...++..++..|-. +.| +
T Consensus 60 ~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dLlS~vq-mp~GvpVatv~~~~nAa~lA~~Il~-~~d---~ 133 (159)
T 3rg8_A 60 KLYITIAGRSNALSGFVDG-FVKGATIACPPPSDSFAGADIYSSLR-MPSGISPALVLEPKNAALLAARIFS-LYD---K 133 (159)
T ss_dssp EEEEEECCSSCCHHHHHHH-HSSSCEEECCCCCCGGGGTHHHHHHC-CCTTCCCEECCSHHHHHHHHHHHHT-TTC---H
T ss_pred cEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCccHHHHHh-CCCCCceEEecCchHHHHHHHHHHh-CCC---H
Confidence 3488777743 33333 3669999999753211 11 111112 1 44422 2334555555555533 355 6
Q ss_pred HHHHHHHHHHHHHHH
Q 012613 424 EMRERILYSKEKAHL 438 (460)
Q Consensus 424 ~~~~~a~~~~~~~~~ 438 (460)
.++++.+.+++++++
T Consensus 134 ~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 134 EIADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 788888888887763
No 188
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=37.27 E-value=36 Score=29.12 Aligned_cols=35 Identities=11% Similarity=0.053 Sum_probs=24.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+++.++++.++ |- --..+|++|+++|++|+++...
T Consensus 6 ~~k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGGR-GA--LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETTT-SH--HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCC-cH--HHHHHHHHHHhCCCEEEEEeCC
Confidence 44556666555 32 3468999999999999987653
No 189
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=37.25 E-value=13 Score=31.46 Aligned_cols=32 Identities=19% Similarity=0.349 Sum_probs=24.4
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|||+++..| .+ -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G---~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGE---TT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCH---HH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCC---HH--HHHHHHHHHhCCCeEEEEECC
Confidence 577777643 32 457899999999999998764
No 190
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=36.53 E-value=31 Score=31.13 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=26.4
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|||+++-.|+.| ..+|..|++.||+|+++...
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcC
Confidence 789999888877 45688999999999998874
No 191
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=36.43 E-value=75 Score=25.22 Aligned_cols=38 Identities=5% Similarity=0.047 Sum_probs=30.9
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++|||+++.+++. ...-+....+.|...|++|.++++.
T Consensus 1 ~~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 1 ASMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3689999998874 5566677788888999999999985
No 192
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=35.86 E-value=1.1e+02 Score=25.61 Aligned_cols=104 Identities=8% Similarity=0.062 Sum_probs=0.0
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCC---CCCCCCCCeEEEEcCCCCCCCccCcccHHHHHHHH
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSK--GFSITIIHTNLNP---LNACNYPHFEFHSISASLSETEASTEDMVAILIAL 89 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~V~~~~~~~~~---~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (460)
|||+++.++..+ -+..|.+++.+. +|+|..+.+.... ...+...|+.+..++..--.+
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~-------------- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDS-------------- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSS--------------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccc--------------
Q ss_pred HHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 90 NAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.......+.+.++.+ +||++|+-.+. .....+-....-.++-++++
T Consensus 64 r~~~~~~~~~~l~~~---------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 64 REAYDRELIHEIDMY---------APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp HHHHHHHHHHHHGGG---------CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred hhhccHHHHHHHHhc---------CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
No 193
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=35.71 E-value=59 Score=28.82 Aligned_cols=38 Identities=16% Similarity=0.178 Sum_probs=23.5
Q ss_pred CCCceEEEE-cCCCccCHHH--HHHHHHHHHhCCCeEEEEe
Q 012613 12 RNGKRVILF-PLPYQGHINP--MLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 12 ~~~~~Il~~-~~~~~GH~~p--~~~La~~L~~rGh~V~~~~ 49 (460)
+..||||++ ..|-..-++- .-..++.|.+.||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 556777555 4554433433 3356788889999999863
No 194
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=35.57 E-value=29 Score=31.46 Aligned_cols=33 Identities=9% Similarity=0.236 Sum_probs=26.9
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.|||+++-.|+.| ..+|..|++.||+|+++...
T Consensus 2 ~mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECST
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3799999888766 45788999999999998874
No 195
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=35.25 E-value=29 Score=29.18 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=25.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|+|.|+..|..| ..+|+.|+++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 5889999766555 5678999999999998754
No 196
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=35.08 E-value=43 Score=29.23 Aligned_cols=38 Identities=8% Similarity=0.059 Sum_probs=26.8
Q ss_pred cCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 10 LPRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 10 ~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
..|..+++++++.++. - --..+|++|+++|++|+++..
T Consensus 21 ~~m~~~k~vlITGas~-g--IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 21 QSMSDTPVVLVTGGSR-G--IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp ---CCSCEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred hhccCCCEEEEECCCc-h--HHHHHHHHHHHCCCEEEEEcC
Confidence 3455677888887764 2 346899999999999987644
No 197
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=35.00 E-value=57 Score=23.93 Aligned_cols=43 Identities=19% Similarity=0.154 Sum_probs=27.3
Q ss_pred HHHHHHhhccCCCCCCCeeEEEECCcch--hHHHHHHHc-------CCCeEEEeCccH
Q 012613 98 WDCLVKLTSISNVQEDSFACIITDPLWY--FVHAVANDF-------KLPTIILQTSSV 146 (460)
Q Consensus 98 ~~~l~~l~~~~~~~~~~pDlvi~D~~~~--~~~~vA~~l-------gIP~v~~~~~~~ 146 (460)
.+.++.+.. . +||+||.|...+ .+..+.+.+ ++|.++++....
T Consensus 36 ~~al~~l~~-----~-~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 36 QIALEKLSE-----F-TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp HHHHHHHTT-----B-CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred HHHHHHHHh-----c-CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 345555544 4 899999997652 344454433 588888876543
No 198
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=34.86 E-value=44 Score=29.43 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=31.8
Q ss_pred CCCceEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPL--PYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~--~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+++++++++. |+.|=..-...||..|+++|.+|.++-..
T Consensus 79 ~~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 79 DSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp TCCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34556655553 57799999999999999999999998664
No 199
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=34.66 E-value=30 Score=29.56 Aligned_cols=31 Identities=16% Similarity=0.082 Sum_probs=23.4
Q ss_pred CeeEEEECCcchh-------HHHHHHHcCCCeEEEeCc
Q 012613 114 SFACIITDPLWYF-------VHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi~D~~~~~-------~~~vA~~lgIP~v~~~~~ 144 (460)
+||+|++|..... |..+.-.+++|+|.+.-+
T Consensus 103 ~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 103 KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 8999999987743 344666679999997643
No 200
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=34.63 E-value=44 Score=29.85 Aligned_cols=38 Identities=11% Similarity=0.077 Sum_probs=31.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+.|+|..-|+.|=..-...||..|+++|++|.++=..
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34566666677899999999999999999999998654
No 201
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=34.57 E-value=95 Score=22.71 Aligned_cols=39 Identities=10% Similarity=0.001 Sum_probs=30.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.+||++++..+.|=-.-...+=+.+..+|.++.+-...
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 457899999887755566668888889999998876554
No 202
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=34.51 E-value=60 Score=29.50 Aligned_cols=27 Identities=19% Similarity=0.199 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHHhhCCCceEEEEcCCc
Q 012613 287 DETEFLEIAWGLANSRVPFLWVVRPGL 313 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~ 313 (460)
+.+....+.+++.+...+.||...++.
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGF 89 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCch
Confidence 445677799999988889999887654
No 203
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=34.32 E-value=45 Score=28.27 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=24.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+|.++++.++. - --..+|++|+++|++|.++..
T Consensus 2 ~k~vlITGas~-g--IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASR-G--IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 56667776653 2 346899999999999888765
No 204
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=34.31 E-value=23 Score=34.52 Aligned_cols=34 Identities=12% Similarity=0.329 Sum_probs=28.2
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+|.||+++-.+.-| +.+|++|.++|++||++.+.
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 47899999877655 57899999999999999874
No 205
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=34.22 E-value=1.9e+02 Score=26.25 Aligned_cols=125 Identities=14% Similarity=0.081 Sum_probs=66.1
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhC--CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCC
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANS--RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHP 350 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~ 350 (460)
-++.+|.+|.++. ..+.++.+. +.+++.++.... + ....+.++. -+.-+-+..+++..+
T Consensus 14 ~rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~----~----~~~~~~~~~----~~~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 14 IRFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDP----A----ALKAAVERT----GARGHASLTDMLAQT 74 (354)
T ss_dssp EEEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSH----H----HHHHHHHHH----CCEEESCHHHHHHHC
T ss_pred ceEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCH----H----HHHHHHHHc----CCceeCCHHHHhcCC
Confidence 3688999998763 344566554 455555554321 0 001121111 123445677888755
Q ss_pred CccceeeccC----chhHHHhHhcCCceeec-cccc--chh-hhHHHhhhhheeeEecCC--ccCHHHHHHHHHHHhcc
Q 012613 351 AVGGFLTHGG----WNSTLESICEGVPMICQ-PYLG--DQM-VNARYISHVWRLGLHLDG--NVERREIEIAVRRVMIE 419 (460)
Q Consensus 351 ~~~~~I~HGG----~gs~~eal~~GvP~v~~-P~~~--DQ~-~na~~v~~~~G~G~~l~~--~~~~~~l~~ai~~vl~~ 419 (460)
++.+++---- ...+.+|+.+|+++++= |+.. ++- ...+..++ .|.-..+.. ...+ ....+++++.+
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~-~g~~~~v~~~~r~~p--~~~~~k~~i~~ 150 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADK-AKKHLFVVKQNRRNA--TLQLLKRAMQE 150 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH-HTCCEEECCGGGGSH--HHHHHHHHHHT
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHH-hCCeEEEEEcccCCH--HHHHHHHHHhc
Confidence 5555664333 23467789999998874 6654 332 23444555 366555544 4444 23444444443
No 206
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=34.22 E-value=2.2e+02 Score=27.77 Aligned_cols=92 Identities=14% Similarity=0.215 Sum_probs=51.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHH-HhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCCCCCCCccCcccHHHHHHHHH--
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVL-YSKGFSITIIHTNLNPLNACNYPHFEFHSISASLSETEASTEDMVAILIALN-- 90 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L-~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 90 (460)
++|++++. .-.-.+.+++.| .+.|.+|..+++.... . ...+...+....
T Consensus 280 GKrv~i~g-----d~~~~~~la~~L~~ElGm~vv~~gt~~~~-~----------------------~~~~~~~~~~~~~~ 331 (525)
T 3aek_B 280 GKRVFIFG-----DGTHVIAAARIAAKEVGFEVVGMGCYNRE-M----------------------ARPLRTAAAEYGLE 331 (525)
T ss_dssp TCEEEECS-----SHHHHHHHHHHHHHTTCCEEEEEEESCGG-G----------------------HHHHHHHHHHTTCC
T ss_pred CCEEEEEc-----CchHHHHHHHHHHHHcCCeeEEEecCchh-H----------------------HHHHHHHHHhcCCc
Confidence 57888773 224477889989 6889999776653100 0 000011111100
Q ss_pred HhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEe
Q 012613 91 AKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQ 142 (460)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~ 142 (460)
......+.++.+.+++ . +||++|.+. ....+|+++|||++.+.
T Consensus 332 v~i~~D~~el~~~i~~-----~-~pDL~ig~~---~~~~~a~~~giP~~~i~ 374 (525)
T 3aek_B 332 ALITDDYLEVEKAIEA-----A-APELILGTQ---MERNIAKKLGLPCAVIS 374 (525)
T ss_dssp CEECSCHHHHHHHHHH-----H-CCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred EEEeCCHHHHHHHHhh-----c-CCCEEEecc---hhHHHHHHcCCCEEEec
Confidence 0001112233333333 2 899999884 46678899999999843
No 207
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=34.09 E-value=57 Score=27.01 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=23.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|||++.. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkvlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG--ATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEc--CCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 5665543 334443 57899999999999998764
No 208
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=33.63 E-value=62 Score=29.55 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHH
Q 012613 287 DETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLE 366 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~e 366 (460)
+.+....+.+++.+...+.||.+.++... . ++.+++++..+-++|.. ||=++-..+++-
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-----------~--------rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 122 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMNS-----------N--------SLLPYIDYDAFQNNPKI--MIGYSDATALLL 122 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG-----------G--------GGGGGSCHHHHHHSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH-----------H--------HHhhhcChhHHhhCCeE--EEEechHHHHHH
Confidence 44567779999998888999988765411 1 34455555555556665 666666666666
Q ss_pred hHh--cCCceeeccc
Q 012613 367 SIC--EGVPMICQPY 379 (460)
Q Consensus 367 al~--~GvP~v~~P~ 379 (460)
+++ .|++.+-=|+
T Consensus 123 al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 123 GIYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHHCCCEEECCC
T ss_pred HHHHhcCceEEECCh
Confidence 665 3666655554
No 209
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=33.56 E-value=76 Score=24.26 Aligned_cols=49 Identities=8% Similarity=-0.014 Sum_probs=33.2
Q ss_pred hcCCceeecccccchhhhHHHhhhhhe-eeEecCCccCHHHHHHHHHHHhcc
Q 012613 369 CEGVPMICQPYLGDQMVNARYISHVWR-LGLHLDGNVERREIEIAVRRVMIE 419 (460)
Q Consensus 369 ~~GvP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~ai~~vl~~ 419 (460)
...+|+|++--..|.......+ + .| +--.+.+.++.++|.++|++++..
T Consensus 74 ~~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp CSSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 3467888776655554444443 3 26 534455568999999999999987
No 210
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=33.54 E-value=21 Score=33.05 Aligned_cols=38 Identities=5% Similarity=0.037 Sum_probs=27.8
Q ss_pred CCceEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHI----NPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~----~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++|||+++..+..+-. .....++++|.++||+|+.+..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 4788988886543322 3457889999999999998864
No 211
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=33.54 E-value=25 Score=31.59 Aligned_cols=33 Identities=18% Similarity=0.051 Sum_probs=26.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
..|+|.|+-.|..| ..+|+.|++.||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 46899999776655 4689999999999998754
No 212
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=33.50 E-value=21 Score=27.22 Aligned_cols=41 Identities=20% Similarity=0.075 Sum_probs=26.9
Q ss_pred hHHHHHHHhhccCCCCCCCeeEEEECCcch--hHHHHHHH---cCCCeEEEe
Q 012613 96 PFWDCLVKLTSISNVQEDSFACIITDPLWY--FVHAVAND---FKLPTIILQ 142 (460)
Q Consensus 96 ~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~--~~~~vA~~---lgIP~v~~~ 142 (460)
.-.+.++.+.. . +||+||.|...+ .+..+++. .++|.|+++
T Consensus 41 ~g~eAl~~~~~-----~-~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 41 RMQEALDIARK-----G-QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CHHHHHHHHHH-----C-CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CHHHHHHHHHh-----C-CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 34466777766 4 899999998763 33444443 478877654
No 213
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=33.42 E-value=30 Score=31.51 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=27.0
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+||.|+-.|..| ..+|..|++.||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 5889999887766 5789999999999998765
No 214
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=33.30 E-value=58 Score=28.73 Aligned_cols=34 Identities=12% Similarity=0.162 Sum_probs=23.9
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.|+++++.++ |-+ -..+|++|+++|++|+++.-.
T Consensus 16 gk~vlVTGas-~gI--G~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 16 QRTVVITGAN-SGL--GAVTARELARRGATVIMAVRD 49 (291)
T ss_dssp TCEEEEECCS-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCC-ChH--HHHHHHHHHHCCCEEEEEECC
Confidence 3455555554 323 368999999999999987653
No 215
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=33.18 E-value=35 Score=30.66 Aligned_cols=29 Identities=21% Similarity=0.439 Sum_probs=25.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITII 48 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~ 48 (460)
+||.|+-.|..|. ++|+.|.+.||+|++.
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~ 32 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVF 32 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEE
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEE
Confidence 5899999998874 7899999999999886
No 216
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=33.02 E-value=31 Score=29.14 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=23.8
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
..|+|+|+..|..| ..+++.|.+.||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 35789999654433 4578899999999988765
No 217
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=32.85 E-value=63 Score=27.28 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=24.6
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++|+|++.. +.|.+ -..|+++|.++||+|+.++-.
T Consensus 19 l~~~~ilVtG--atG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 19 FQGMRVLVVG--ANGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp --CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCeEEEEC--CCChH--HHHHHHHHHhCCCeEEEEECC
Confidence 3467776654 33443 357899999999999998764
No 218
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=32.81 E-value=2.3e+02 Score=25.58 Aligned_cols=134 Identities=10% Similarity=-0.010 Sum_probs=67.3
Q ss_pred CCeEEEEEccCcccCC-HHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCC
Q 012613 272 PKSVIYVSFGSVVNID-ETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHP 350 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~ 350 (460)
++++++++ |...... ..+...+++-+++.+++-++.+++-.. ..|.. +...+.......++....
T Consensus 101 g~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~~-------~~pht------rp~~V~~~at~~~l~~~~ 166 (319)
T 2p90_A 101 NKPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAPM-------TVPHT------RPTVVTAHGNSTDRLKDQ 166 (319)
T ss_dssp CCEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEE-------SCCTT------SCCCEEEEESSGGGCSSC
T ss_pred CCeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCccC-------CCCCC------CCCCeEEEeCCHHHHhhh
Confidence 34566665 6555433 356677888899999998887765321 01100 000111111122222211
Q ss_pred Cc--cceeeccCchhHH--HhHhcCCceeec----cccc---chhhhHHHhhhhh--eeeEecCC---ccCHHHHHHHHH
Q 012613 351 AV--GGFLTHGGWNSTL--ESICEGVPMICQ----PYLG---DQMVNARYISHVW--RLGLHLDG---NVERREIEIAVR 414 (460)
Q Consensus 351 ~~--~~~I~HGG~gs~~--eal~~GvP~v~~----P~~~---DQ~~na~~v~~~~--G~G~~l~~---~~~~~~l~~ai~ 414 (460)
.. +-..-.||..++. ++...|+|.+++ |+.. +-+.=|..+-+.+ =+|+.++. .-.++.+++.|+
T Consensus 167 ~~~~~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~L~e~A~~~e~~i~ 246 (319)
T 2p90_A 167 VSLDTRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLALERDAEKVHRQLM 246 (319)
T ss_dssp CCCCCCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred hccccCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Confidence 11 0122245666554 456899999987 3222 3333333222111 13445544 445677888888
Q ss_pred HHhcc
Q 012613 415 RVMIE 419 (460)
Q Consensus 415 ~vl~~ 419 (460)
++.+.
T Consensus 247 ~l~~~ 251 (319)
T 2p90_A 247 EQTEE 251 (319)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88863
No 219
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=32.74 E-value=1e+02 Score=26.01 Aligned_cols=42 Identities=17% Similarity=0.105 Sum_probs=28.4
Q ss_pred eeeccChH-H-hhcCCCccceeeccCchhHHHhHh---------cCCceeeccc
Q 012613 337 IVKWAPQQ-E-VLAHPAVGGFLTHGGWNSTLESIC---------EGVPMICQPY 379 (460)
Q Consensus 337 ~~~~vp~~-~-ll~~~~~~~~I~HGG~gs~~eal~---------~GvP~v~~P~ 379 (460)
++...+.. . +...++ ..++--||.||+-|... +++|++++-.
T Consensus 95 ~~~~f~~Rk~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 95 AVADMHQRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EESSHHHHHHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred ecCCHHHHHHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 44455543 3 334444 36778999999988763 4899999865
No 220
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=32.67 E-value=36 Score=30.59 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=26.9
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+.|+|.|+-.|..| ..+|+.|++.||+|+++..
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 345899999776654 6789999999999998754
No 221
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=32.64 E-value=38 Score=28.47 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=24.1
Q ss_pred CeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.||+|| +|+.. ..+..=|.++|||+|.+..+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 678866 67765 55667799999999998754
No 222
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=32.24 E-value=51 Score=29.97 Aligned_cols=38 Identities=0% Similarity=-0.026 Sum_probs=25.6
Q ss_pred HHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeCc
Q 012613 101 LVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 101 l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~~ 144 (460)
+|.+.+ . +||+||..........--+..|||++.+...
T Consensus 109 ~E~i~a-----l-~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 109 TEACVA-----A-TPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp HHHHHH-----T-CCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHh-----c-CCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 566655 4 8999998754333333445679999998644
No 223
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=32.02 E-value=23 Score=32.82 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=25.1
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 16 RVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 16 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+|+|+-.|..| ..+|..|++.||+|+++..
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHM 46 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECS
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 89999887666 4678999999999998765
No 224
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=32.00 E-value=84 Score=28.32 Aligned_cols=74 Identities=15% Similarity=0.231 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhc-CCCccceeeccCchhH
Q 012613 286 IDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLA-HPAVGGFLTHGGWNST 364 (460)
Q Consensus 286 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~-~~~~~~~I~HGG~gs~ 364 (460)
.+.+....+.+++.+...+.||.+.++.. -. ++.++++...+-+ +|.. ||=++-..+.
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-----------a~--------rlLp~LD~~~i~~a~PK~--~iGySDiTaL 122 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYG-----------CG--------QLLPGLDWGRLQAASPRP--LIGFSDISVL 122 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSC-----------GG--------GGTTTCCHHHHHHSCCCC--EEECGGGHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcC-----------HH--------HHhhccchhhhhccCCCE--EEEEchhHHH
Confidence 34566777899998888889998877541 11 4455666666666 7777 8888888888
Q ss_pred HHhHhc-CCceeecccc
Q 012613 365 LESICE-GVPMICQPYL 380 (460)
Q Consensus 365 ~eal~~-GvP~v~~P~~ 380 (460)
+-+++. |++.+-=|+.
T Consensus 123 ~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 123 LSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHTTCCEEECCCG
T ss_pred HHHHHHcCCcEEECHhh
Confidence 877763 7777666653
No 225
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=31.85 E-value=39 Score=30.12 Aligned_cols=37 Identities=5% Similarity=0.124 Sum_probs=28.0
Q ss_pred ceEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGH---INPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH---~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 6899998874321 234567999999999999988764
No 226
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=31.79 E-value=65 Score=26.77 Aligned_cols=33 Identities=9% Similarity=0.221 Sum_probs=23.4
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|||++.. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLG--ATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 5655543 334443 67899999999999998764
No 227
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=31.70 E-value=18 Score=34.85 Aligned_cols=105 Identities=14% Similarity=0.116 Sum_probs=53.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcC--CCCCCCc---cCcccHHHHHHH
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSIS--ASLSETE---ASTEDMVAILIA 88 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~--~~~~~~~---~~~~~~~~~~~~ 88 (460)
+++-+|++. .|=.-++.+|+.|.+.|+++. +|........+ .|+.+..+. .++|+.. ..+-.+. +..-
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e-~GI~v~~V~~vTgfPEil~GRVKTLHP~-ihgG 81 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIAD-TGIPVTPVEQLTGFPEVLDGRVKTLHPR-VHAG 81 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHT-TTCCCEEHHHHHSCCCCTTTTSSSCSHH-HHHH
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHH-cCCceeeccccCCCchhhCCccccCCch-hhhh
Confidence 455566666 344558899999999999965 33323322222 577776665 3555443 3333332 2211
Q ss_pred HHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHH
Q 012613 89 LNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVA 131 (460)
Q Consensus 89 ~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA 131 (460)
.. ......+-++.+.+ ..-. ..|+|+++.+- .--.++
T Consensus 82 iL--a~r~~~~h~~~l~~--~~i~-~iDlVvvNLYP-F~~tv~ 118 (523)
T 3zzm_A 82 LL--ADLRKSEHAAALEQ--LGIE-AFELVVVNLYP-FSQTVE 118 (523)
T ss_dssp HH--CCTTSHHHHHHHHH--HTCC-CCSEEEEECCC-HHHHHH
T ss_pred hc--cCCCCHHHHHHHHH--CCCC-ceeEEEEeCCC-hHHHHh
Confidence 11 11112222222222 1113 78999999544 344444
No 228
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=31.69 E-value=67 Score=29.05 Aligned_cols=43 Identities=14% Similarity=0.058 Sum_probs=33.5
Q ss_pred cCCCC-ceEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012613 10 LPRNG-KRVILFP-LPYQGHINPMLQIASVLYSKGFSITIIHTNL 52 (460)
Q Consensus 10 ~~~~~-~~Il~~~-~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~ 52 (460)
...++ ++|+|+. -|+.|-..-...||..|+++|++|.++....
T Consensus 8 ~~~~gm~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 8 KFNKGKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CCBTTBCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred cCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 34445 4554444 4577999999999999999999999998864
No 229
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=31.63 E-value=39 Score=24.61 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=23.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKG-FSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rG-h~V~~~~~~ 51 (460)
.++|+++.. |.+ -..+++.|.++| |+|+++...
T Consensus 5 ~~~v~I~G~---G~i--G~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGA---GKI--GQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECC---SHH--HHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECC---CHH--HHHHHHHHHhCCCceEEEEeCC
Confidence 467888754 333 246899999999 999887653
No 230
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=31.58 E-value=2.3e+02 Score=23.65 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=29.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++|+++++. +-.|.-..--..|.++|++|.=+++.
T Consensus 24 ~~Lr~avVCa---SN~NRSMEAH~~L~k~Gf~V~SfGTG 59 (214)
T 4h3k_B 24 SPLRVAVVSS---SNQNRSMEAHNILSKRGFSVRSFGTG 59 (214)
T ss_dssp --CEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCeEEEECC---CCcchhHHHHHHHHHCCCceEeecCC
Confidence 4688888875 56788888889999999999999886
No 231
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=31.38 E-value=32 Score=30.82 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=26.0
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
-++|.|+-.|..|+ .+|..|+++||+|+++..
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 46799998877665 588999999999988754
No 232
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=31.33 E-value=52 Score=29.65 Aligned_cols=34 Identities=0% Similarity=0.026 Sum_probs=25.8
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSK-G-FSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~r-G-h~V~~~~~~ 51 (460)
|++|+|+++..+.. .++++.|++. | ++|.++...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 56799999866654 4789999886 7 888877553
No 233
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=31.28 E-value=30 Score=31.92 Aligned_cols=38 Identities=11% Similarity=0.084 Sum_probs=27.4
Q ss_pred CCCceEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEe
Q 012613 12 RNGKRVILFPLPYQG-H---INPMLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 12 ~~~~~Il~~~~~~~G-H---~~p~~~La~~L~~rGh~V~~~~ 49 (460)
|+++||+++..|..+ | +.....++++|.+.||+|+.+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 567899888555333 4 3455678999999999999874
No 234
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=31.19 E-value=31 Score=26.32 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=24.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++|+++..+..| ..+++.|.+.|++|+++...
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3568887654333 46789999999999987653
No 235
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=31.05 E-value=57 Score=28.57 Aligned_cols=34 Identities=12% Similarity=0.029 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.+.++++.++.| --..+|++|+++|++|.++.-
T Consensus 29 ~~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 29 EGASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TTEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4567777776643 346899999999999988754
No 236
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=31.02 E-value=53 Score=29.08 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=26.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+.|+++++.++.| --..+|++|+++|++|.++.-.
T Consensus 10 ~~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 10 TKRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp --CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 35677777777643 3468999999999999887653
No 237
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=30.99 E-value=1.6e+02 Score=25.29 Aligned_cols=35 Identities=14% Similarity=0.084 Sum_probs=28.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.|+++++.++.| --.++|++|++.|.+|.++.-.
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 10 AGQQVLVTGGSSG---IGAAIAMQFAELGAEVVALGLD 44 (242)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 5788888888764 3578999999999999987654
No 238
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=30.98 E-value=32 Score=32.24 Aligned_cols=35 Identities=20% Similarity=0.441 Sum_probs=27.3
Q ss_pred hHHhhcCCCccceeeccCchhHHHhHhc----CC-ceeeccc
Q 012613 343 QQEVLAHPAVGGFLTHGGWNSTLESICE----GV-PMICQPY 379 (460)
Q Consensus 343 ~~~ll~~~~~~~~I~HGG~gs~~eal~~----Gv-P~v~~P~ 379 (460)
..++-..+|+ +|+=||=||+..|+.. ++ |+|++..
T Consensus 108 ~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 108 EQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 3445556787 9999999999999654 67 7988874
No 239
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=30.96 E-value=12 Score=19.01 Aligned_cols=17 Identities=24% Similarity=0.583 Sum_probs=13.7
Q ss_pred CchhHHHhHhcCCceee
Q 012613 360 GWNSTLESICEGVPMIC 376 (460)
Q Consensus 360 G~gs~~eal~~GvP~v~ 376 (460)
|.|++...|..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888764
No 240
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=30.89 E-value=43 Score=29.13 Aligned_cols=34 Identities=24% Similarity=0.134 Sum_probs=25.0
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++++++.++.| --..+|++|+++|++|+++.-.
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456667666542 3468999999999999987653
No 241
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=30.89 E-value=3.4e+02 Score=25.53 Aligned_cols=138 Identities=15% Similarity=0.090 Sum_probs=75.5
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCC-
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHP- 350 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~- 350 (460)
..+.|-|-+||.+ +-...+.+...|+..|..+-..+.+.. .+|+.+.+ ++.+.+- ...
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~saH--------R~p~~~~~----------~~~~~~~-~g~~ 322 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSAH--------KGPDETLR----------IKAEYEG-DGIP 322 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHH----------HHHHHHT-TCCC
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeecc--------CCHHHHHH----------HHHHHHH-CCCC
Confidence 3466777788876 556777888888888988766665543 25555421 1000000 112
Q ss_pred CccceeeccCch----hHHHhHhcCCceeecccccchhhhHHHhh--h--hheeeEecCC-ccCHHHHHHHHHHHhcccc
Q 012613 351 AVGGFLTHGGWN----STLESICEGVPMICQPYLGDQMVNARYIS--H--VWRLGLHLDG-NVERREIEIAVRRVMIETE 421 (460)
Q Consensus 351 ~~~~~I~HGG~g----s~~eal~~GvP~v~~P~~~DQ~~na~~v~--~--~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~ 421 (460)
+| +|.-+|.. ++..++ .-+|+|.+|....-......+. . . |+.+..-. ..++..++..|. .+.|
T Consensus 323 ~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~~~~nAa~~A~~Il-~~~~-- 395 (425)
T 2h31_A 323 TV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVLSPEGSAQFAAQIF-GLSN-- 395 (425)
T ss_dssp EE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECCCHHHHHHHHHHHH-HTTC--
T ss_pred eE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEecCchHHHHHHHHHH-ccCC--
Confidence 24 77666642 444444 5799999998532111112222 1 1 33322211 345555555554 4566
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012613 422 GQEMRERILYSKEKAHL 438 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~ 438 (460)
..++++.+..+..++.
T Consensus 396 -~~l~~kl~~~~~~~~~ 411 (425)
T 2h31_A 396 -HLVWSKLRASILNTWI 411 (425)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 6777777777777663
No 242
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=30.56 E-value=65 Score=28.47 Aligned_cols=38 Identities=5% Similarity=-0.025 Sum_probs=28.3
Q ss_pred CceEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQ-GHIN---PMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~-GH~~---p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+|+|+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478888876543 2322 4568999999999999988765
No 243
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=30.43 E-value=53 Score=29.14 Aligned_cols=33 Identities=15% Similarity=0.233 Sum_probs=25.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++|+|.|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 468999998777664 468889999999987644
No 244
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=30.32 E-value=38 Score=25.37 Aligned_cols=14 Identities=14% Similarity=0.366 Sum_probs=9.8
Q ss_pred HHHHhCCCeEEEEe
Q 012613 36 SVLYSKGFSITIIH 49 (460)
Q Consensus 36 ~~L~~rGh~V~~~~ 49 (460)
.++++.|.+|.+++
T Consensus 73 ~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 73 IELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHTTCCEEEEE
T ss_pred HHHHHCCCeEEEEe
Confidence 33446688888888
No 245
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=30.30 E-value=72 Score=28.58 Aligned_cols=38 Identities=8% Similarity=-0.044 Sum_probs=30.0
Q ss_pred CceEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQG-H---INPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~G-H---~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++||+++..+..+ | +.....++++|.++||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6788888876543 2 457889999999999999998754
No 246
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=30.25 E-value=58 Score=28.61 Aligned_cols=41 Identities=20% Similarity=0.139 Sum_probs=32.3
Q ss_pred CCCCceEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 11 PRNGKRVILFPLPY---QGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 11 ~~~~~~Il~~~~~~---~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
-+..||.+|++.|. -|-=.-.-.|+.-|.+||++|++.--.
T Consensus 19 ~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 19 YFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp --CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 35678999999773 366677889999999999999998654
No 247
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=30.23 E-value=98 Score=22.96 Aligned_cols=65 Identities=11% Similarity=-0.012 Sum_probs=44.2
Q ss_pred hcCCCccceeeccCchh---------HHHhHhcCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHh
Q 012613 347 LAHPAVGGFLTHGGWNS---------TLESICEGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVM 417 (460)
Q Consensus 347 l~~~~~~~~I~HGG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl 417 (460)
+..+++ +|--.|..| +..|...|+|+|++=.++.+. .-..+++. +. .+- ..+.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~--~iV-~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SS--EVV-GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CS--EEE-CSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cc--eec-cCCHHHHHHHHHhcc
Confidence 355677 999999887 567889999999997766541 11224432 21 111 378899999998876
Q ss_pred c
Q 012613 418 I 418 (460)
Q Consensus 418 ~ 418 (460)
+
T Consensus 109 ~ 109 (111)
T 1eiw_A 109 D 109 (111)
T ss_dssp C
T ss_pred C
Confidence 4
No 248
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=30.06 E-value=67 Score=28.99 Aligned_cols=35 Identities=17% Similarity=0.440 Sum_probs=23.7
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++.|+|++.. +.|.+- ..|+++|.++||+|+.+..
T Consensus 25 ~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILITG--GAGFVG--SHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEEc--CccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 4456766553 334443 5788999999999998875
No 249
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=30.05 E-value=83 Score=26.13 Aligned_cols=30 Identities=7% Similarity=0.206 Sum_probs=23.1
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEE
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWV 308 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 308 (460)
++++.+-+|+. .+..+.+||+.+|..+.++
T Consensus 3 ~~I~iiD~g~~------n~~si~~al~~~G~~~~v~ 32 (211)
T 4gud_A 3 QNVVIIDTGCA------NISSVKFAIERLGYAVTIS 32 (211)
T ss_dssp CCEEEECCCCT------THHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEECCCC------hHHHHHHHHHHCCCEEEEE
Confidence 46888888864 3467889999999987764
No 250
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=29.98 E-value=77 Score=26.40 Aligned_cols=33 Identities=18% Similarity=0.454 Sum_probs=23.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|+|++. |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 566655 3335443 57899999999999998764
No 251
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=29.85 E-value=48 Score=28.67 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=29.9
Q ss_pred CceEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFP--LPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+++++.+. -|+.|-..-...||..|+++|++|.++=..
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 45554443 456699999999999999999999998654
No 252
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=29.81 E-value=35 Score=31.00 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=25.7
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++.++|.|+-.|..| ..+|..|+++||+|+++-.
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 445789999877665 5789999999999998755
No 253
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=29.60 E-value=62 Score=23.79 Aligned_cols=27 Identities=11% Similarity=0.151 Sum_probs=22.2
Q ss_pred ccCHHHHHHHHHHHHhC-CC-eEEEEeCC
Q 012613 25 QGHINPMLQIASVLYSK-GF-SITIIHTN 51 (460)
Q Consensus 25 ~GH~~p~~~La~~L~~r-Gh-~V~~~~~~ 51 (460)
.......+.+|..+.+. || +|.++-..
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 35567789999999999 99 99987765
No 254
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=29.55 E-value=43 Score=28.00 Aligned_cols=31 Identities=23% Similarity=0.241 Sum_probs=23.8
Q ss_pred CeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.||++| +|+.. ..+..=|.++|||+|.+..+
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DT 143 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALVDT 143 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEECT
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEEcC
Confidence 578765 77766 55666799999999998754
No 255
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=29.49 E-value=41 Score=28.00 Aligned_cols=31 Identities=26% Similarity=0.207 Sum_probs=22.7
Q ss_pred ceEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFP-LPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~-~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|+++- .|..| ..+++.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 5788875 44333 4678999999999988754
No 256
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=29.45 E-value=56 Score=26.31 Aligned_cols=39 Identities=13% Similarity=0.144 Sum_probs=31.4
Q ss_pred CCceEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQ---GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~---GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.+|+++|.=+. --..+...|++.|.++|.+|.|..+|
T Consensus 21 ~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 21 EANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp HCSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4688888874322 34578999999999999999999886
No 257
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=29.45 E-value=1.1e+02 Score=24.69 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=31.2
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.+||+++.+++. ...-+....+.|...|++|+++++.
T Consensus 7 ~~~~~v~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 7 LTGKKIAILAADGV-EEIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp CTTCEEEEECCTTC-BHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEeCCCC-CHHHHHHHHHHHHHCCCEEEEEecC
Confidence 35689999988765 4566777788898999999999985
No 258
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=29.41 E-value=46 Score=28.92 Aligned_cols=31 Identities=29% Similarity=0.235 Sum_probs=24.3
Q ss_pred CeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.||+|| +|+.. ..++.=|.++|||+|.+..+
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 183 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 183 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcC
Confidence 688876 67765 55667799999999998755
No 259
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=29.40 E-value=30 Score=31.33 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=24.7
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|+|+..|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 578888776655 4568899999999999865
No 260
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=29.28 E-value=2.7e+02 Score=23.90 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=28.3
Q ss_pred hHHHHHHHhhccCCCCCCCeeEEEECCcc---hhHHHHHHHcCCCeEE
Q 012613 96 PFWDCLVKLTSISNVQEDSFACIITDPLW---YFVHAVANDFKLPTII 140 (460)
Q Consensus 96 ~l~~~l~~l~~~~~~~~~~pDlvi~D~~~---~~~~~vA~~lgIP~v~ 140 (460)
.++.+++.+++ . .+.+.|..+ ..+..+|+..|+|++.
T Consensus 116 ~m~~vm~~l~~-----~---gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 116 IMRAILEVVKE-----K---NAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHH-----T---TCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHH-----C---CCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 45556666755 2 588998885 5678899999999988
No 261
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=29.21 E-value=1.5e+02 Score=22.16 Aligned_cols=38 Identities=18% Similarity=0.066 Sum_probs=23.9
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEE
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVV 309 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 309 (460)
.+.+|+++.||........+..+.+.+++....+.+.+
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 35799999999754333456667777765434444443
No 262
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=29.18 E-value=30 Score=31.22 Aligned_cols=33 Identities=18% Similarity=0.150 Sum_probs=25.8
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGF-SITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh-~V~~~~~ 50 (460)
+.|+|.|+-.|..| ..+|+.|++.|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 46899999877665 578999999999 9888755
No 263
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=29.07 E-value=26 Score=29.70 Aligned_cols=33 Identities=9% Similarity=0.044 Sum_probs=25.5
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+|.|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 22 ~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 22 SMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred cCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 35799999866554 4688999999999988544
No 264
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=29.01 E-value=21 Score=32.13 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=26.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSK-----G-FSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r-----G-h~V~~~~~ 50 (460)
.+|+|+|+-.|..|. .+|..|++. | |+|+++..
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 358999998777663 568888888 9 99999865
No 265
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=29.00 E-value=52 Score=31.33 Aligned_cols=31 Identities=26% Similarity=0.444 Sum_probs=24.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|.|+..|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 588888766655 5688899999999988754
No 266
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=28.93 E-value=1.8e+02 Score=21.65 Aligned_cols=48 Identities=4% Similarity=-0.088 Sum_probs=33.8
Q ss_pred cCCceeecccccchhhhHHHhhhhheeeEecCCcc-CHHHHHHHHHHHhcc
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNV-ERREIEIAVRRVMIE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~-~~~~l~~ai~~vl~~ 419 (460)
..+|+|++--..|...- .+..+ .|+--.+.+.+ +.+.|.++|++++..
T Consensus 80 ~~~pii~~s~~~~~~~~-~~~~~-~ga~~~l~Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 80 QHTPIVILTDNVSDDRA-KQCMA-AGASSVVDKSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp TTCCEEEEETTCCHHHH-HHHHH-TTCSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHH-HHHHH-cCCCEEEECCCCcHHHHHHHHHHHHHH
Confidence 46888888765555443 33445 37776676667 999999999998853
No 267
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=28.87 E-value=45 Score=29.47 Aligned_cols=33 Identities=24% Similarity=0.183 Sum_probs=25.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+-++|.|+-.|..| ..+|+.|+++||+|+++-.
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 34789999666544 5689999999999988654
No 268
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=28.85 E-value=50 Score=28.48 Aligned_cols=36 Identities=6% Similarity=0.001 Sum_probs=24.6
Q ss_pred HHHhhccCCCCCCCeeEEEECCcch--hHHHHHHHcCCCeEEEe
Q 012613 101 LVKLTSISNVQEDSFACIITDPLWY--FVHAVANDFKLPTIILQ 142 (460)
Q Consensus 101 l~~l~~~~~~~~~~pDlvi~D~~~~--~~~~vA~~lgIP~v~~~ 142 (460)
+|.+.+ . +||+||+..... ....--+..|||++.+.
T Consensus 52 ~E~i~~-----l-~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 52 AEGILA-----M-KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHHT-----T-CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHc-----c-CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 556655 4 899999876542 23334457799999875
No 269
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=28.82 E-value=34 Score=30.74 Aligned_cols=32 Identities=13% Similarity=0.021 Sum_probs=26.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+|||+|+..|+.|- .+|..|+ .||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 48999998887764 6688888 99999998764
No 270
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=28.68 E-value=46 Score=28.10 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=23.7
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
||.++++.++. - --..+|++|+++|++|.++...
T Consensus 1 Mk~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASS-G--LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTS-H--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCc-h--HHHHHHHHHHHCCCEEEEEeCC
Confidence 45666666653 2 3468999999999999887653
No 271
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=28.54 E-value=33 Score=31.72 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=26.3
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++.|+|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 457899999776654 5789999999999998754
No 272
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=28.52 E-value=1.2e+02 Score=28.07 Aligned_cols=84 Identities=12% Similarity=0.060 Sum_probs=48.5
Q ss_pred cCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHhhcCCCChHHH
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETEGQEMRERILYSKEKAHLCLKPGGSSYQS 449 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 449 (460)
..+|+|++.-..+. ..+...-+ .|+--.+.+.++.+.|...|++++.. ..+++....++.........--+....
T Consensus 71 ~~~pvIvlT~~~~~-~~~~~a~~-~Ga~dyl~KP~~~~~L~~~i~~~l~~---~~l~~~~~~l~~~~~~~~~~~ig~s~~ 145 (387)
T 1ny5_A 71 PETEVIVITGHGTI-KTAVEAMK-MGAYDFLTKPCMLEEIELTINKAIEH---RKLRKENELLRREKDLKEEEYVFESPK 145 (387)
T ss_dssp TTSEEEEEEETTCH-HHHHHHHT-TTCCEEEEESCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTTCCCCCCCSHH
T ss_pred CCCcEEEEeCCCCH-HHHHHHHh-cCceEEecCCCCHHHHHHHHHHHHHH---HHHHHHHHHhhhhhhhcchhhhhccHH
Confidence 46888888665554 34444445 37765666678999999999999976 444444444443322111111222345
Q ss_pred HHHHHHHHh
Q 012613 450 LERLIDHIL 458 (460)
Q Consensus 450 ~~~~~~~~~ 458 (460)
+.++.+.++
T Consensus 146 m~~l~~~i~ 154 (387)
T 1ny5_A 146 MKEILEKIK 154 (387)
T ss_dssp HHHHHHHHH
T ss_pred hhHHHHHHH
Confidence 666655554
No 273
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=28.43 E-value=42 Score=29.71 Aligned_cols=31 Identities=16% Similarity=0.226 Sum_probs=24.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~ 49 (460)
.|+|+|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 47999998777664 57888999999998654
No 274
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=28.42 E-value=32 Score=31.44 Aligned_cols=36 Identities=11% Similarity=0.183 Sum_probs=25.6
Q ss_pred cCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeC
Q 012613 10 LPRNGKRVILFPLPYQGHINPMLQIASVLYSKGF-SITIIHT 50 (460)
Q Consensus 10 ~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh-~V~~~~~ 50 (460)
+..++|||.++-.|..|. . +|..|+..|| +|+++-.
T Consensus 5 ~~~~~~kI~VIGaG~vG~---~--lA~~la~~g~~~V~L~D~ 41 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGG---T--MGYLCALRELADVVLYDV 41 (331)
T ss_dssp CCSCCCEEEEECCSHHHH---H--HHHHHHHHTCCEEEEECS
T ss_pred cCCCCCEEEEECCCHHHH---H--HHHHHHhCCCCeEEEEEC
Confidence 334468999987644443 2 8899999999 9777654
No 275
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=28.30 E-value=73 Score=27.77 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=25.5
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --..+|++|+++|++|.++..
T Consensus 27 ~~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 27 TDRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4567777776642 346799999999999988655
No 276
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=28.25 E-value=64 Score=28.44 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=29.3
Q ss_pred ceEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFP--LPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++++.+. -|+.|=..-...||..|+++|++|.++=..
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 3444444 357799999999999999999999987654
No 277
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=28.24 E-value=1.2e+02 Score=27.84 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=24.8
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcC
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRP 311 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (460)
++++++.|+.+. ......++++|.+.|.++.+.+..
T Consensus 22 rIl~~~~~~~Gh--~~~~~~la~~L~~~GheV~v~~~~ 57 (412)
T 3otg_A 22 RVLFASLGTHGH--TYPLLPLATAARAAGHEVTFATGE 57 (412)
T ss_dssp EEEEECCSSHHH--HGGGHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEcCCCccc--HHHHHHHHHHHHHCCCEEEEEccH
Confidence 577777665432 223456888998889988888764
No 278
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=28.21 E-value=62 Score=24.86 Aligned_cols=47 Identities=2% Similarity=-0.031 Sum_probs=35.0
Q ss_pred cCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhc
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMI 418 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 418 (460)
..+|+|++--..+... ..+..+ .|+--.+.+.++.++|.++|++++.
T Consensus 86 ~~ipvI~lTa~~~~~~-~~~~~~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQ-IIEAAQ-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHH-HHHHHH-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHH-HHHHHH-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 4689988876665544 444445 4887777777999999999999875
No 279
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=28.19 E-value=42 Score=26.70 Aligned_cols=68 Identities=16% Similarity=0.104 Sum_probs=0.0
Q ss_pred cCchhHHHhHh--cCCceeecccccchhhhHHHhhhhheeeEecCC-ccCHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Q 012613 359 GGWNSTLESIC--EGVPMICQPYLGDQMVNARYISHVWRLGLHLDG-NVERREIEIAVRRVMIETEGQEMRERILYSKEK 435 (460)
Q Consensus 359 GG~gs~~eal~--~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~-~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~~~ 435 (460)
+|..+.+..+. .|+| +.-+..|-..||..+... . .++...|.+++++--.+.. +...++.++++++
T Consensus 87 ~G~daLlS~vqmP~gvp--VatV~I~~~~nAa~lA~~--------Il~~~d~~l~~kl~~~r~~~~-~~v~~~~~~l~~~ 155 (157)
T 2ywx_A 87 DGLDALLSSVQMPPGIP--VATVGIDRGENAAILALE--------ILALKDENIAKKLIEYREKMK-KKVYASDEKVKEM 155 (157)
T ss_dssp GGHHHHHHHHSCCTTSC--CEECCTTCHHHHHHHHHH--------HHTTTCHHHHHHHHHHHHHHH-HHHHHHHHHHHTT
T ss_pred CcHHHHHHHhcCCCCCe--eEEEecCCcHHHHHHHHH--------HHhcCCHHHHHHHHHHHHHHH-HHHHHhHHHHHHh
Q ss_pred HH
Q 012613 436 AH 437 (460)
Q Consensus 436 ~~ 437 (460)
++
T Consensus 156 ~~ 157 (157)
T 2ywx_A 156 FK 157 (157)
T ss_dssp CC
T ss_pred hC
No 280
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=28.19 E-value=41 Score=29.73 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=24.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 788888776554 5679999999999998754
No 281
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=28.09 E-value=35 Score=30.43 Aligned_cols=32 Identities=13% Similarity=0.053 Sum_probs=26.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+|+|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 5799999887776 4689999999999998754
No 282
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=27.99 E-value=35 Score=31.86 Aligned_cols=47 Identities=9% Similarity=0.062 Sum_probs=30.1
Q ss_pred ccccccCCCCceEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 5 QESCRLPRNGKRVILFPLPYQGH----INPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 5 ~~~~~~~~~~~~Il~~~~~~~GH----~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|+-=+..|+++||+++..|..+- +.....++++|.+.||+|+.+...
T Consensus 28 ~~~~~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 78 (383)
T 3k3p_A 28 QQMGRGSMSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFIT 78 (383)
T ss_dssp ---------CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hhcccccccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEec
Confidence 44456667889999888775433 367788889998889999988754
No 283
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=27.93 E-value=38 Score=30.99 Aligned_cols=30 Identities=7% Similarity=0.091 Sum_probs=21.0
Q ss_pred CeeEEEECCcch-hHHHHHHHcCCCeEEEeC
Q 012613 114 SFACIITDPLWY-FVHAVANDFKLPTIILQT 143 (460)
Q Consensus 114 ~pDlvi~D~~~~-~~~~vA~~lgIP~v~~~~ 143 (460)
+||+||+..... ....+.+.+|||++.+..
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 899999865432 223456778999999753
No 284
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=27.93 E-value=49 Score=29.57 Aligned_cols=29 Identities=21% Similarity=0.491 Sum_probs=25.2
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITII 48 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~ 48 (460)
.||.|+-.|..| .++|+.|.++||+|++.
T Consensus 6 ~kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~ 34 (297)
T 4gbj_A 6 EKIAFLGLGNLG-----TPIAEILLEAGYELVVW 34 (297)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEC
T ss_pred CcEEEEecHHHH-----HHHHHHHHHCCCeEEEE
Confidence 479999998877 47899999999999875
No 285
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=27.89 E-value=71 Score=27.87 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=27.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|++|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 6788888888764 347899999999999988765
No 286
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=27.76 E-value=1.3e+02 Score=24.39 Aligned_cols=81 Identities=14% Similarity=0.011 Sum_probs=47.0
Q ss_pred eEEEEEccCccc---CCHHHHHHHHHHHhhCCCceEEE--EcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhc
Q 012613 274 SVIYVSFGSVVN---IDETEFLEIAWGLANSRVPFLWV--VRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLA 348 (460)
Q Consensus 274 ~vI~vs~GS~~~---~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~ 348 (460)
.+-.++.|+... ........+.+.|++.|..+... +++ -++.+.+. -.+.+.
T Consensus 5 ~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~D-----------d~~~I~~~------------l~~a~~ 61 (172)
T 3kbq_A 5 NASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMD-----------DLDEIGWA------------FRVALE 61 (172)
T ss_dssp EEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECS-----------CHHHHHHH------------HHHHHH
T ss_pred EEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCC-----------CHHHHHHH------------HHHHHh
Confidence 356677777532 22334455777778888776543 332 12222110 022344
Q ss_pred CCCccceeeccCch-----hHHHhHh--cCCceeeccc
Q 012613 349 HPAVGGFLTHGGWN-----STLESIC--EGVPMICQPY 379 (460)
Q Consensus 349 ~~~~~~~I~HGG~g-----s~~eal~--~GvP~v~~P~ 379 (460)
.+|+ +|+-||.| -|.|++. .|++++..|-
T Consensus 62 ~~Dl--VittGG~g~~~~D~T~ea~a~~~~~~l~~~~e 97 (172)
T 3kbq_A 62 VSDL--VVSSGGLGPTFDDMTVEGFAKCIGQDLRIDED 97 (172)
T ss_dssp HCSE--EEEESCCSSSTTCCHHHHHHHHHTCCCEECHH
T ss_pred cCCE--EEEcCCCcCCcccchHHHHHHHcCCCeeeCHH
Confidence 5777 99999988 3556664 6888877764
No 287
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=27.67 E-value=84 Score=25.61 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=23.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+||++++.- +.|-+ -..++++|+ +||+|+++...
T Consensus 2 ~kM~vlVtG--asg~i--G~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLIG--ASGTL--GSAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEET--TTSHH--HHHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEEc--CCcHH--HHHHHHHHH-CCCeEEEEecC
Confidence 457755443 23444 367899999 99999987653
No 288
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=27.65 E-value=72 Score=27.31 Aligned_cols=33 Identities=18% Similarity=0.036 Sum_probs=23.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
||.++++.++ |- --..+|++|+++|++|+++.-
T Consensus 1 mk~vlVTGas-~g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCA-TG--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 4556666555 32 346789999999999988765
No 289
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=27.53 E-value=63 Score=27.01 Aligned_cols=34 Identities=9% Similarity=0.051 Sum_probs=28.0
Q ss_pred eEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012613 16 RVILFPL-PYQGHINPMLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 16 ~Il~~~~-~~~GH~~p~~~La~~L~~rGh~V~~~~ 49 (460)
.|.+... ++.|-..-...||..|+++|++|.++-
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 4555553 677999999999999999999999863
No 290
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=27.47 E-value=59 Score=28.81 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=23.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+|+|++.. +.|.+- ..++++|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVG--GTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 46666653 334443 46789999999999987754
No 291
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=27.40 E-value=72 Score=28.26 Aligned_cols=39 Identities=15% Similarity=0.336 Sum_probs=29.3
Q ss_pred CCCceEEEEcCCCccCHHHH--HHHHHHHHhCC-CeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPM--LQIASVLYSKG-FSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~--~~La~~L~~rG-h~V~~~~~~ 51 (460)
.++.|||++. +..+|-.+. ..|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4678999994 444886444 57788888888 999998764
No 292
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=27.38 E-value=58 Score=28.23 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=30.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.|.|..-|+.|-..-...||..|+++|++|.++=..
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 4566666677899999999999999999999987553
No 293
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=27.36 E-value=50 Score=28.42 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=26.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
..++|.|+-.|..| ..+|+.|++.||+|++...
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 47999999766544 5679999999999998765
No 294
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.22 E-value=32 Score=27.95 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=25.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSK-GFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh~V~~~~~~ 51 (460)
.+++|+++..|..| ..+|+.|.++ ||+|+++...
T Consensus 38 ~~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECC
Confidence 36789998654433 5678999999 9999988653
No 295
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=27.21 E-value=63 Score=27.74 Aligned_cols=31 Identities=19% Similarity=0.113 Sum_probs=23.5
Q ss_pred CeeEEEECCcch-------hHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACIITDPLWY-------FVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi~D~~~~-------~~~~vA~~lgIP~v~~~~~ 144 (460)
+||++++|.... .|..+.-.+++|+|.+.=+
T Consensus 107 ~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 144 (237)
T 3goc_A 107 PPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKN 144 (237)
T ss_dssp CCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESS
T ss_pred CCCEEEEeCceeecCCCcchhheeeeecCCCEEeeecc
Confidence 899999998762 2345777789999997543
No 296
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=27.13 E-value=1.1e+02 Score=26.33 Aligned_cols=37 Identities=14% Similarity=0.211 Sum_probs=28.0
Q ss_pred ceEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQ-----------GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~-----------GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+||+++-.... -...=++.-...|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57887776632 12556777788999999999999985
No 297
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=27.11 E-value=63 Score=28.34 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=24.8
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+.|+++++.++.| --..+|++|+++|++|.++..
T Consensus 22 ~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 22 SRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp ---CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 34567777777642 346789999999999988765
No 298
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=27.09 E-value=47 Score=28.80 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=27.0
Q ss_pred ceEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQ--GHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~--GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+|++++.++- |+ -+.+|+.|+++|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 58999988764 33 37899999999999999765
No 299
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=27.07 E-value=68 Score=28.25 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.++++++.++.| --..+|++|+++|++|.++..
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 27 PSPVALITGAGSG---IGRATALALAADGVTVGALGR 60 (283)
T ss_dssp CCCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4567777776642 346899999999999988765
No 300
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=26.93 E-value=82 Score=27.31 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=25.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
..|+++++.++.| --..+|++|+++|++|.++.-
T Consensus 19 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 19 DGKRALITGATKG---IGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3466777766642 346899999999999988765
No 301
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=26.89 E-value=60 Score=27.71 Aligned_cols=39 Identities=8% Similarity=0.183 Sum_probs=31.5
Q ss_pred hHHHHHHHhhccCCCCCCCeeEEEECCcchhHHHHHHHcCCCeEEEeC
Q 012613 96 PFWDCLVKLTSISNVQEDSFACIITDPLWYFVHAVANDFKLPTIILQT 143 (460)
Q Consensus 96 ~l~~~l~~l~~~~~~~~~~pDlvi~D~~~~~~~~vA~~lgIP~v~~~~ 143 (460)
...+.++++++ . +.|+||.+. .+..+|+++|+|.+.+.+
T Consensus 142 e~~~~i~~l~~-----~-G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 142 DARGQINELKA-----N-GTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHH-----T-TCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHH-----C-CCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 45567788877 5 889999984 467899999999999874
No 302
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=26.87 E-value=96 Score=28.02 Aligned_cols=33 Identities=15% Similarity=0.271 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.|||+|+..|..+ .+..++|.+.||+|..+.+.
T Consensus 4 mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 4 MIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp TSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECC
T ss_pred ceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 4899999888653 35567888889999977664
No 303
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=26.72 E-value=51 Score=29.32 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=26.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|+|.|+-.|..|. .+|+.|++.||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 37899998877764 678999999999998754
No 304
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=26.72 E-value=1.2e+02 Score=25.99 Aligned_cols=37 Identities=19% Similarity=0.355 Sum_probs=27.5
Q ss_pred ceEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQ-----------GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~-----------GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+||+|+..... -...=+....+.|.+.|++|+++++.
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 57877776421 14466777788888999999999985
No 305
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=26.69 E-value=54 Score=29.50 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=27.5
Q ss_pred ceEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQ--GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~--GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+|++++.++- |+ -+.+|+.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 58999988764 33 378999999999999997653
No 306
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=26.66 E-value=82 Score=26.08 Aligned_cols=36 Identities=8% Similarity=0.099 Sum_probs=28.7
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
..++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456666667777878899999999999999877654
No 307
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=26.65 E-value=1e+02 Score=28.41 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=28.9
Q ss_pred ccccccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 5 QESCRLPRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 5 ~~~~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++.|.. ++|+|+++..+ .....+++++.++|++|..+...
T Consensus 3 ~~~pm~~-~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 3 LGTALRP-AATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp BCCTTST-TCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESS
T ss_pred cCCCCCC-CCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECC
Confidence 3444333 36889998543 23577899999999999888764
No 308
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=26.53 E-value=78 Score=26.26 Aligned_cols=33 Identities=9% Similarity=0.204 Sum_probs=23.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|+|++.. +.|-+- ..++++|.++||+|+.+.-.
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 4666553 334333 58899999999999998764
No 309
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=26.48 E-value=57 Score=28.54 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=26.9
Q ss_pred ceEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQ--GHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~--GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+|++++.++- |+ -+.+|+.|+.+|++|+++..
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEe
Confidence 58999888764 33 37899999999999999765
No 310
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=26.42 E-value=76 Score=27.96 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=28.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|++|++.|.+|.++.-
T Consensus 28 ~gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 28 NAKIAVITGATSG---IGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 5689999988864 347899999999999988764
No 311
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=26.38 E-value=38 Score=29.07 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=23.7
Q ss_pred CeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.||+|| .|+.. ..+..=|.++|||+|.+..+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 488877 67655 45666799999999998654
No 312
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=26.37 E-value=46 Score=30.97 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=26.7
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.++|+++..|.. -+..|..|+++||+|+++=..
T Consensus 2 ~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 2 KSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESS
T ss_pred CcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEec
Confidence 3578888877653 467899999999999998653
No 313
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=26.24 E-value=45 Score=29.54 Aligned_cols=31 Identities=23% Similarity=0.334 Sum_probs=24.7
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|.|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 5788988777664 578899999999987654
No 314
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=26.21 E-value=96 Score=25.53 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=26.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 17 VILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 17 Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|+|+..+...+-.....+++.|++.|+.|.+++-.
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 45555555567778889999999999999987654
No 315
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=26.14 E-value=45 Score=30.17 Aligned_cols=32 Identities=9% Similarity=0.025 Sum_probs=26.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKG-FSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rG-h~V~~~~~ 50 (460)
.|+|.|+-.|..| ..+|+.|++.| |+|+++..
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeC
Confidence 3789999877666 77899999999 99998754
No 316
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=26.12 E-value=3.6e+02 Score=24.17 Aligned_cols=109 Identities=16% Similarity=0.181 Sum_probs=58.2
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhC-CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANS-RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.+|.+|.++. ..+.++.+. +.+++.++.... + ....+.++. -..-+-...+++..+++
T Consensus 6 rvgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~----~----~~~~~a~~~----g~~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 6 RIALFGAGRIGH-------VHAANIAANPDLELVVIADPFI----E----GAQRLAEAN----GAEAVASPDEVFARDDI 66 (344)
T ss_dssp EEEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSH----H----HHHHHHHTT----TCEEESSHHHHTTCSCC
T ss_pred EEEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCCH----H----HHHHHHHHc----CCceeCCHHHHhcCCCC
Confidence 577888887652 345556554 445554544321 0 001111111 12234456788885555
Q ss_pred cceeeccCch----hHHHhHhcCCceeec-cccc--chh-hhHHHhhhhheeeEecCC
Q 012613 353 GGFLTHGGWN----STLESICEGVPMICQ-PYLG--DQM-VNARYISHVWRLGLHLDG 402 (460)
Q Consensus 353 ~~~I~HGG~g----s~~eal~~GvP~v~~-P~~~--DQ~-~na~~v~~~~G~G~~l~~ 402 (460)
.+++.---.. .+.+|+.+|+++++= |+.. ++- ...+..++ .|+-..+..
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~~ 123 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGD-GASKVMLGF 123 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGG-GGGGEEECC
T ss_pred CEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHh-cCCeEEecc
Confidence 5576544433 467889999998874 6544 332 23444555 366555544
No 317
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=26.05 E-value=2.6e+02 Score=27.58 Aligned_cols=27 Identities=19% Similarity=0.428 Sum_probs=22.9
Q ss_pred ccceeeccC------chhHHHhHhcCCceeecc
Q 012613 352 VGGFLTHGG------WNSTLESICEGVPMICQP 378 (460)
Q Consensus 352 ~~~~I~HGG------~gs~~eal~~GvP~v~~P 378 (460)
..++++|.| .+.+.+|-..++|+|++-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 445999998 568899999999999994
No 318
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=26.00 E-value=98 Score=25.44 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=33.2
Q ss_pred ccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 9 RLPRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 9 ~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|...+++.|++...++.|=-.-...|++.|...|+.|..+..
T Consensus 4 m~~~~~~~I~l~G~~GsGKsT~~~~L~~~l~~~~~~v~~~~~ 45 (215)
T 1nn5_A 4 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRF 45 (215)
T ss_dssp ---CCCCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccccCCcEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEeeC
Confidence 444457889999999999999999999999999999865543
No 319
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=25.94 E-value=1.2e+02 Score=27.73 Aligned_cols=31 Identities=13% Similarity=0.156 Sum_probs=22.7
Q ss_pred CCCccceeec-cCchhHHHhHhcCCceeeccccc
Q 012613 349 HPAVGGFLTH-GGWNSTLESICEGVPMICQPYLG 381 (460)
Q Consensus 349 ~~~~~~~I~H-GG~gs~~eal~~GvP~v~~P~~~ 381 (460)
.+|+ +|++ .+......|-..|+|.+.+-...
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 6787 7766 55666677788999999885433
No 320
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=25.91 E-value=57 Score=29.04 Aligned_cols=31 Identities=29% Similarity=0.235 Sum_probs=24.1
Q ss_pred CeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.||+|| +|+.. ..++.=|.++|||+|.+..+
T Consensus 118 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 150 (295)
T 2zkq_b 118 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 150 (295)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECT
T ss_pred CCCeEEEeCCCcchhHHHHHHHhCCCEEEEecC
Confidence 678876 67766 55667799999999998765
No 321
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=25.86 E-value=78 Score=30.22 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=27.1
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+++||+|+-.+..| +.+|+.|+++||+|+..=.
T Consensus 7 ~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 357899999987754 3469999999999998643
No 322
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=25.82 E-value=92 Score=23.25 Aligned_cols=40 Identities=15% Similarity=0.262 Sum_probs=32.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNP 54 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~ 54 (460)
++..++++++|+. ....+..++.|.+.|.+|.++......
T Consensus 12 ~g~dv~iv~~Gs~--~~~a~eA~~~L~~~Gi~v~vi~~r~~~ 51 (118)
T 3ju3_A 12 KEADITFVTWGSQ--KGPILDVIEDLKEEGISANLLYLKMFS 51 (118)
T ss_dssp SSCSEEEEEEGGG--HHHHHHHHHHHHHTTCCEEEEEECSSC
T ss_pred CCCCEEEEEECcc--HHHHHHHHHHHHHCCCceEEEEECeEe
Confidence 4567999999874 567888899999999999998775333
No 323
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=25.81 E-value=72 Score=27.48 Aligned_cols=31 Identities=0% Similarity=-0.032 Sum_probs=20.8
Q ss_pred CeeEEEECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACIITDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
+||+||+.... ......-+.+|||++.+...
T Consensus 60 ~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 60 KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp CCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred CCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 89999986433 22233456679999987543
No 324
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=25.77 E-value=37 Score=30.32 Aligned_cols=39 Identities=18% Similarity=0.100 Sum_probs=29.9
Q ss_pred CCceEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQG----HINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~G----H~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++|||+++..+..+ -+.....++++|.++||+|..+...
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 46899998866432 2455778999999999999988764
No 325
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=25.73 E-value=1.9e+02 Score=25.59 Aligned_cols=115 Identities=13% Similarity=0.109 Sum_probs=69.9
Q ss_pred HHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcC
Q 012613 292 LEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEG 371 (460)
Q Consensus 292 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~G 371 (460)
..+++.+++.+..+++..+.. .-+|+.+.+..+.+++=. |-.+|| ...|.+....|+.+|
T Consensus 156 ~~~~~~l~~~~~Dlivlagy~--------~il~~~~l~~~~~~~iNi----HpSlLP--------~~rG~~p~~~A~~~G 215 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLARYM--------QILSDEMSARLAGRCINI----HHSFLP--------GFKGAKPYHQAFDRG 215 (288)
T ss_dssp HHHHHHHHHHTCCEEEESSCC--------SCCCHHHHHHTTTSEEEE----EEECSS--------CCCSSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEhhhhh--------hhCCHHHHhhhcCCeEEe----Cccccc--------CCCCchHHHHHHHcC
Confidence 457778887788888887753 337787765554322211 112232 235889999999999
Q ss_pred Cceeeccccc--chhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhccccHHHHHHHHHHHH
Q 012613 372 VPMICQPYLG--DQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETEGQEMRERILYSK 433 (460)
Q Consensus 372 vP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~ 433 (460)
+...++-.+. +..+.+..+... -+.+...-|.+.|.+.+.++-.. .|.+..+.+.
T Consensus 216 ~~~~G~Tvh~v~~~~D~GpIi~Q~---~v~i~~~dt~~~L~~r~~~~e~~----~l~~av~~~~ 272 (288)
T 3obi_A 216 VKLIGATAHYVTSALDEGPIIDQD---VERISHRDTPADLVRKGRDIERR----VLSRALHYHL 272 (288)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCEEEEEEEEECCCCcCCCeEEEE---EEecCCCCCHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999888653 333333333331 22333356888888888766543 5666555544
No 326
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=25.73 E-value=52 Score=28.57 Aligned_cols=31 Identities=26% Similarity=0.200 Sum_probs=23.8
Q ss_pred CeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.||+|| +|+.. ..++.=|.++|||+|.+..+
T Consensus 117 ~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial~DT 149 (252)
T 3u5c_A 117 EPRLVIVTDPRSDAQAIKEASYVNIPVIALTDL 149 (252)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEEEECT
T ss_pred CCceEEEeCCccchHHHHHHHHcCCCEEEEEcC
Confidence 578765 77766 55666799999999998755
No 327
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=25.63 E-value=77 Score=26.19 Aligned_cols=34 Identities=6% Similarity=0.136 Sum_probs=24.7
Q ss_pred CceEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEE
Q 012613 14 GKRVILFPLPY---QGHINPMLQIASVLYSKGFSITI 47 (460)
Q Consensus 14 ~~~Il~~~~~~---~GH~~p~~~La~~L~~rGh~V~~ 47 (460)
.|+|.++.... .-+..-...|++.|+++|+.|+.
T Consensus 13 ~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~ 49 (189)
T 3sbx_A 13 RWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVW 49 (189)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEE
Confidence 58899998655 12345567888888999998655
No 328
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=25.62 E-value=1.9e+02 Score=26.17 Aligned_cols=109 Identities=12% Similarity=0.042 Sum_probs=58.3
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhC-CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANS-RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.+|.+|.++ ...+.++.+. +.+++.++..+. + ....+.++. -+..+-...+++..+++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~----~----~~~~~~~~~----g~~~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTE----D----KREKFGKRY----NCAGDATMEALLAREDV 67 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSH----H----HHHHHHHHH----TCCCCSSHHHHHHCSSC
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCH----H----HHHHHHHHc----CCCCcCCHHHHhcCCCC
Confidence 57888888765 3456677665 555555554321 0 011121111 11224566788866555
Q ss_pred cceeeccC----chhHHHhHhcCCceeec-cccc--chhh-hHHHhhhhheeeEecCC
Q 012613 353 GGFLTHGG----WNSTLESICEGVPMICQ-PYLG--DQMV-NARYISHVWRLGLHLDG 402 (460)
Q Consensus 353 ~~~I~HGG----~gs~~eal~~GvP~v~~-P~~~--DQ~~-na~~v~~~~G~G~~l~~ 402 (460)
.+++.--- .-.+.+|+.+|+++++= |+.. +|-. ..+..++ .|+-..+..
T Consensus 68 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~-~~~~~~v~~ 124 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKE-TGVKFLCGH 124 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH-HCCCEEEEC
T ss_pred CEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHH-cCCeEEEee
Confidence 55664332 34567889999998873 6543 3432 3344455 366555543
No 329
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=25.56 E-value=92 Score=26.79 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=25.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+|.++++.++. -+ -..+|++|+++|++|+++..
T Consensus 6 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcC
Confidence 467777776663 23 36899999999999998754
No 330
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=25.49 E-value=2.5e+02 Score=25.10 Aligned_cols=108 Identities=8% Similarity=0.011 Sum_probs=58.4
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhC-CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANS-RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.++.+|.++. ..+.++.+. +.+++.++.... + ....+.++. -+. +-+..+++..+++
T Consensus 5 ~vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~----~----~~~~~~~~~----~~~-~~~~~~~l~~~~~ 64 (331)
T 4hkt_A 5 RFGLLGAGRIGK-------VHAKAVSGNADARLVAVADAFP----A----AAEAIAGAY----GCE-VRTIDAIEAAADI 64 (331)
T ss_dssp EEEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSH----H----HHHHHHHHT----TCE-ECCHHHHHHCTTC
T ss_pred EEEEECCCHHHH-------HHHHHHhhCCCcEEEEEECCCH----H----HHHHHHHHh----CCC-cCCHHHHhcCCCC
Confidence 577888887652 345556554 455554444321 0 011121111 122 5567788886555
Q ss_pred cceeeccC----chhHHHhHhcCCceeec-cccc--chhh-hHHHhhhhheeeEecCC
Q 012613 353 GGFLTHGG----WNSTLESICEGVPMICQ-PYLG--DQMV-NARYISHVWRLGLHLDG 402 (460)
Q Consensus 353 ~~~I~HGG----~gs~~eal~~GvP~v~~-P~~~--DQ~~-na~~v~~~~G~G~~l~~ 402 (460)
.+++.--- .-.+.+++.+|+++++= |+.. ++-. ..+..++ .|+-..+..
T Consensus 65 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~~ 121 (331)
T 4hkt_A 65 DAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSD-TKAKLMVGF 121 (331)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH-TTCCEEECC
T ss_pred CEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHH-cCCeEEEcc
Confidence 55664332 34577889999998873 6543 3322 3445555 376666554
No 331
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=25.41 E-value=54 Score=28.94 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=24.6
Q ss_pred ceEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPL-PYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~-~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|+|+.. |..| ..+|+.|.++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 68999977 6655 4678999999999987654
No 332
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=25.31 E-value=44 Score=31.34 Aligned_cols=31 Identities=16% Similarity=0.284 Sum_probs=24.7
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|+++-.|..| +..|..|+++|++|+++=.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFER 31 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeC
Confidence 567777777655 7889999999999999843
No 333
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=25.31 E-value=99 Score=24.69 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=24.1
Q ss_pred EEEEEccCcccCCHHHHHHHHHHHhhCC
Q 012613 275 VIYVSFGSVVNIDETEFLEIAWGLANSR 302 (460)
Q Consensus 275 vI~vs~GS~~~~~~~~~~~~~~al~~~~ 302 (460)
.+|+++||........++..++++++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998878888999999998753
No 334
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=25.31 E-value=1.3e+02 Score=21.23 Aligned_cols=34 Identities=9% Similarity=0.074 Sum_probs=25.5
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+..+|++++..+ ......++.|.+.||+|..+..
T Consensus 55 ~~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 55 DNETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TTSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 457888888443 3467889999999998887654
No 335
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=25.31 E-value=77 Score=30.71 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=26.5
Q ss_pred CCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012613 11 PRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITII 48 (460)
Q Consensus 11 ~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~ 48 (460)
+.+.+||.|+..++.| +-.+|+.|.++|++|+..
T Consensus 19 ~~~~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~ 52 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAG----MGGIAEVLANEGYQISGS 52 (494)
T ss_dssp ---CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEE
T ss_pred hccCCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEE
Confidence 3456899999999876 445899999999999975
No 336
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=25.28 E-value=39 Score=32.73 Aligned_cols=34 Identities=15% Similarity=0.352 Sum_probs=27.0
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|.|++|.|+-.|..| ..+|+.|+++||+|++...
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNR 46 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 568999999888765 5689999999999988754
No 337
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=25.27 E-value=86 Score=27.46 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=25.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --..+|++|+++|++|+++..
T Consensus 26 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 26 NQRVCIVTGGGSG---IGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4566777766642 346899999999999988764
No 338
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=25.24 E-value=1.2e+02 Score=22.51 Aligned_cols=36 Identities=8% Similarity=0.048 Sum_probs=26.1
Q ss_pred eEEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeCC
Q 012613 16 RVILFPLPYQGHI--NPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~Il~~~~~~~GH~--~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
-+.++..+-+|+. .-.+.+|..+.+.||+|.++-..
T Consensus 4 ~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 4 IAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp EEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 3444555555665 66788999999999999987665
No 339
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=25.20 E-value=86 Score=27.12 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=25.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --..+|++|+++|++|+++..
T Consensus 7 ~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 7 SEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3566777766643 346899999999999988764
No 340
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=25.19 E-value=98 Score=26.57 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=23.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+.++++.++ |-+ -..+|++|+++|++|+++.-
T Consensus 14 ~k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 14 NKVALVTAST-DGI--GLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp TCEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3455666554 333 46789999999999988764
No 341
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=25.19 E-value=77 Score=22.95 Aligned_cols=47 Identities=6% Similarity=-0.054 Sum_probs=33.7
Q ss_pred cCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcc
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 419 (460)
..+|+|++ ..+.........+ .|+--.+.+.++.++|.+.|++++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLK-AHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHST-TCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHH-hCcchheeCCCCHHHHHHHHHHHHcC
Confidence 57899998 4444445555556 47765666678999999999998864
No 342
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=25.18 E-value=91 Score=26.88 Aligned_cols=34 Identities=18% Similarity=0.141 Sum_probs=24.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++. -+ -..+|++|+++|++|+++..
T Consensus 3 ~~k~vlVTGas~-gI--G~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 3 QNKCALVTGSSR-GV--GKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 456777776663 23 46789999999999998633
No 343
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=25.16 E-value=80 Score=26.85 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=28.5
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
-++++|+++..| ......++.|.+.|.+|+++.+.
T Consensus 29 L~gk~VLVVGgG-----~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGG-----TIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCS-----HHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEECCC
Confidence 357888888665 45678889999999999999885
No 344
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=25.15 E-value=80 Score=25.19 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=21.8
Q ss_pred EEEEEccCcccCCHHHHHHHHHHHhhC
Q 012613 275 VIYVSFGSVVNIDETEFLEIAWGLANS 301 (460)
Q Consensus 275 vI~vs~GS~~~~~~~~~~~~~~al~~~ 301 (460)
+.|+++||........++..++++.+.
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 679999999876667788888888765
No 345
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=25.15 E-value=59 Score=29.37 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=25.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++|||+|+..+.. .....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeC
Confidence 4699999988653 245567777889999876653
No 346
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=25.08 E-value=34 Score=33.07 Aligned_cols=29 Identities=21% Similarity=0.397 Sum_probs=23.3
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITII 48 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~ 48 (460)
++|+|+-.|-.| +.-|..|+++||+|+++
T Consensus 2 k~VvVIGaG~~G-----L~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 2 KPTTVIGAGFGG-----LALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCcHHH-----HHHHHHHHHCCCcEEEE
Confidence 678888666544 67788999999999997
No 347
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=25.07 E-value=84 Score=27.05 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=24.7
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|+++++.++.| --..+|++|+++|++|+++..
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 456677766642 347899999999999988765
No 348
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=24.91 E-value=66 Score=29.97 Aligned_cols=35 Identities=11% Similarity=0.075 Sum_probs=27.5
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.++|+++..+.. .+.+++++++.|++|+++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 45789999877754 366999999999999998653
No 349
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=24.89 E-value=45 Score=30.78 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=29.1
Q ss_pred CCCceEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHI----NPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~----~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+++||+++..|..+-- .....++++|.+.||+|+.+..
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i 43 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGI 43 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEE
Confidence 35789988887755443 4455888999888999998765
No 350
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=24.87 E-value=94 Score=25.59 Aligned_cols=36 Identities=19% Similarity=0.155 Sum_probs=27.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
..++++..+..|.-.-+..+++.|+++|+.|..+-.
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 445555566667777889999999999999877654
No 351
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=24.72 E-value=49 Score=31.98 Aligned_cols=32 Identities=13% Similarity=0.168 Sum_probs=26.5
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|||.|+-.|..| ..+|..|++.||+|+++-.
T Consensus 8 ~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 8 SMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 4899999777665 5689999999999998854
No 352
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.71 E-value=78 Score=30.57 Aligned_cols=34 Identities=18% Similarity=0.281 Sum_probs=28.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhC-CC-eEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSK-GF-SITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~r-Gh-~V~~~~~~ 51 (460)
..|+|.|+..|..| .++|..|++. || +|+++-..
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 35899999888877 5789999999 99 99998654
No 353
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=24.60 E-value=66 Score=28.23 Aligned_cols=34 Identities=26% Similarity=0.202 Sum_probs=27.4
Q ss_pred ceEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQ--GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~--GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+|++++.++- |+ -+.+|+.|+.+|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEeC
Confidence 58999888764 33 378999999999999997653
No 354
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=24.59 E-value=1.6e+02 Score=24.71 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=22.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKG-FSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rG-h~V~~~~~~ 51 (460)
|+.++++.++ |-+ -..|+++|.++| |+|+++.-.
T Consensus 23 mk~vlVtGat-G~i--G~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 23 MKNVLILGAG-GQI--ARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CEEEEEETTT-SHH--HHHHHHHHTTCTTEEEEEEESS
T ss_pred ccEEEEEeCC-cHH--HHHHHHHHHhCCCceEEEEEcC
Confidence 3444444333 433 357899999999 999988754
No 355
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=24.56 E-value=90 Score=27.95 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=23.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++|+|++. |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 2 ~~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 34666654 3334443 56899999999999987653
No 356
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=24.51 E-value=83 Score=27.16 Aligned_cols=34 Identities=12% Similarity=0.033 Sum_probs=24.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --..+|++|+++|++|.++..
T Consensus 7 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 7 TNRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 3456666666642 346899999999999988744
No 357
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.45 E-value=30 Score=26.79 Aligned_cols=57 Identities=12% Similarity=0.032 Sum_probs=36.1
Q ss_pred cCCceeecccccchhhhHHHhhhhhe-eeEecCCccCHHHHHHHHHHHhccccHHHHHHHHHH
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWR-LGLHLDGNVERREIEIAVRRVMIETEGQEMRERILY 431 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~ 431 (460)
..+|+|++--..+....... .+ .| +--.+.+.++.+.|.++|++++.. ..+++..++
T Consensus 78 ~~~~ii~ls~~~~~~~~~~~-~~-~g~~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~ 135 (154)
T 2rjn_A 78 PDIERVVISGYADAQATIDA-VN-RGKISRFLLKPWEDEDVFKVVEKGLQL---AFLREENLR 135 (154)
T ss_dssp TTSEEEEEECGGGHHHHHHH-HH-TTCCSEEEESSCCHHHHHHHHHHHHHH---HHHHHHTTS
T ss_pred CCCcEEEEecCCCHHHHHHH-Hh-ccchheeeeCCCCHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 47888888665553333333 33 25 544555568999999999999976 444444333
No 358
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=24.38 E-value=37 Score=29.82 Aligned_cols=39 Identities=10% Similarity=-0.060 Sum_probs=35.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASV--------LYSK-GFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~--------L~~r-Gh~V~~~~~~ 51 (460)
++.+|++.+.++-.|-....-++.- |..+ |++|+.++..
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~ 166 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQ 166 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSS
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCC
Confidence 4788999999999999999999987 9999 9999998874
No 359
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=24.34 E-value=75 Score=29.40 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=32.1
Q ss_pred CCCCceEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 11 PRNGKRVILFP--LPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 11 ~~~~~~Il~~~--~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
..++++++.+. -|+.|=..-...||..|+++|++|.++-..
T Consensus 139 ~~~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 139 ENDKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp CTTSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cCCCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 34455554444 567799999999999999999999998764
No 360
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=24.25 E-value=77 Score=28.24 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=23.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|+|+++ |+.|.+- ..|+++|.++||+|++++-.
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 5 EKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECC
T ss_pred cEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECC
Confidence 556555 3345553 46889999999999998764
No 361
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=24.24 E-value=51 Score=31.56 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=25.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|||.|+-.|..| ..+|..|+++||+|+++-..
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 799999766544 57899999999999987553
No 362
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=24.19 E-value=94 Score=26.46 Aligned_cols=42 Identities=19% Similarity=0.131 Sum_probs=30.2
Q ss_pred chhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceE
Q 012613 263 CISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFL 306 (460)
Q Consensus 263 l~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i 306 (460)
+.+|+.. .++++++..|+........+..+.++++.+|..+.
T Consensus 24 l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~ 65 (229)
T 1fy2_A 24 IANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVT 65 (229)
T ss_dssp HHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 5666653 56899999987544445667788999999886543
No 363
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=24.18 E-value=74 Score=27.99 Aligned_cols=36 Identities=11% Similarity=0.186 Sum_probs=29.7
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 16 RVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.|.|..-|+.|-..-...||..|+++|++|.++=..
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 455655667799999999999999999999987543
No 364
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=24.16 E-value=1.6e+02 Score=25.92 Aligned_cols=32 Identities=16% Similarity=0.398 Sum_probs=22.0
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|++.- +.|.+- ..|+++|.++||+|+.+..
T Consensus 1 m~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTG--GAGFIG--SHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CEEEEEC--CCChHH--HHHHHHHHhCCCEEEEEeC
Confidence 4554443 334443 4689999999999998764
No 365
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=24.14 E-value=68 Score=27.58 Aligned_cols=36 Identities=17% Similarity=-0.055 Sum_probs=23.7
Q ss_pred HHHhhccCCCCCCCeeEEEECCcc--hhHHHHHHHcCCCeEEEe
Q 012613 101 LVKLTSISNVQEDSFACIITDPLW--YFVHAVANDFKLPTIILQ 142 (460)
Q Consensus 101 l~~l~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~lgIP~v~~~ 142 (460)
+|.+.+ . +||+||+.... .....--+..|||++.+.
T Consensus 52 ~E~i~~-----l-~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 52 SEGILS-----L-RPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp HHHHHT-----T-CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHc-----c-CCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 556655 4 89999986542 223333466899998874
No 366
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=24.08 E-value=88 Score=26.85 Aligned_cols=34 Identities=12% Similarity=0.001 Sum_probs=25.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.++++++.++.| --..+|++|+++|++|.++.-
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 3456666666542 346899999999999988765
No 367
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=24.05 E-value=2.2e+02 Score=22.72 Aligned_cols=48 Identities=2% Similarity=-0.123 Sum_probs=32.6
Q ss_pred cCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcc
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 419 (460)
..+|+|++--..|.. .+....+ .|+--.+.+.++.+.|..+|+.++..
T Consensus 78 ~~~~ii~lt~~~~~~-~~~~a~~-~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 78 PRTTLVALVEYESPA-VLSQIIE-LECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp TTCEEEEEECCCSHH-HHHHHHH-HTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCChH-HHHHHHH-cCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 468888876655544 4444445 37665565568888999999888765
No 368
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=24.00 E-value=88 Score=24.97 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=22.8
Q ss_pred EEEEEccCcccCCHHHHHHHHHHHhhC
Q 012613 275 VIYVSFGSVVNIDETEFLEIAWGLANS 301 (460)
Q Consensus 275 vI~vs~GS~~~~~~~~~~~~~~al~~~ 301 (460)
.+|+++||........++..+++|.+.
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 28 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDI 28 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 589999999876777888888888875
No 369
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=23.91 E-value=47 Score=32.03 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=26.8
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|++++|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 346789999877665 4678999999999988754
No 370
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=23.88 E-value=42 Score=29.18 Aligned_cols=29 Identities=24% Similarity=0.242 Sum_probs=22.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITII 48 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~ 48 (460)
|+|.|+-.|..|. .+|+.|.+.||+|++.
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEe
Confidence 5788887665553 5799999999999884
No 371
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=23.81 E-value=72 Score=27.41 Aligned_cols=33 Identities=9% Similarity=-0.041 Sum_probs=23.3
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
||.++++.++. -+ -..+|++|+++|++|+++.-
T Consensus 1 Mk~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKH-FG--GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTS-TT--HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCc-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 45667776653 33 35789999999999887543
No 372
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=23.67 E-value=1.1e+02 Score=23.68 Aligned_cols=37 Identities=19% Similarity=0.341 Sum_probs=25.0
Q ss_pred ceEEE-EcCCCccC--HHHHHHHHHHHHhCCCeE-EEEeCC
Q 012613 15 KRVIL-FPLPYQGH--INPMLQIASVLYSKGFSI-TIIHTN 51 (460)
Q Consensus 15 ~~Il~-~~~~~~GH--~~p~~~La~~L~~rGh~V-~~~~~~ 51 (460)
|+++| +..+.+|. ..-.+.+|+.+.+.||+| .++-..
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 55544 44444554 444578899999999999 776554
No 373
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=23.60 E-value=80 Score=28.07 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=22.7
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 16 RVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+|++. |+.|.+- ..++++|.++||+|+.++-.
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECC
Confidence 56555 3334443 56889999999999988764
No 374
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=23.52 E-value=94 Score=26.78 Aligned_cols=33 Identities=21% Similarity=0.129 Sum_probs=24.4
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+.++++.++.| --..+|++|+++|++|.++..
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 456677766642 346789999999999888764
No 375
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=23.49 E-value=66 Score=29.05 Aligned_cols=33 Identities=9% Similarity=0.170 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+|||+|+..|..+ ++..++|.+.||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeC
Confidence 6899999988654 35568888899999877663
No 376
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=23.44 E-value=1.1e+02 Score=25.55 Aligned_cols=40 Identities=18% Similarity=0.112 Sum_probs=33.7
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|+++-|+|-..++.|--.-...|++.|..+|+.|.....+
T Consensus 4 m~g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~v~~~~~p 43 (213)
T 4edh_A 4 MTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREP 43 (213)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCcccccCC
Confidence 5678889999999999999999999999999999655443
No 377
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=23.43 E-value=80 Score=27.20 Aligned_cols=34 Identities=9% Similarity=0.002 Sum_probs=23.0
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~ 49 (460)
..++|.|-|- --..-+-.+...|+++|++|++++
T Consensus 5 ~vL~v~aHPD-De~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 5 HILAFGAHAD-DVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp SEEEEESSTT-HHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEEeCCC-hHHHhHHHHHHHHHHCCCeEEEEE
Confidence 3455666665 234556667777888999998864
No 378
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=23.35 E-value=1.4e+02 Score=25.07 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=28.2
Q ss_pred ceEEEEcC----------CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPL----------PYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~----------~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+||+|+.+ ++ -...-+....+.|...|++|+++++.
T Consensus 6 ~kv~ill~~~~~~~~~~~~G-~~~~e~~~p~~~l~~ag~~v~~vs~~ 51 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTG-LWLEEFAVPYLVFQEKGYDVKVASIQ 51 (224)
T ss_dssp CEEEEEECCCCEEETTEECC-BCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ceEEEEECCcccccCCCCCc-eeHHHHHHHHHHHHHCCCeEEEECCC
Confidence 47877776 33 35567778888899999999999985
No 379
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=23.33 E-value=54 Score=28.93 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=25.1
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 689999877766 4578999999999998754
No 380
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=23.28 E-value=54 Score=30.72 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=24.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|+++-.|..| +..|.+|+++|++|+++=.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 1 MRAVVVGAGLGG-----LLAGAFLARNGHEIIVLEK 31 (421)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 577888777655 7889999999999999843
No 381
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=23.25 E-value=73 Score=31.16 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=28.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.+||.|+..++.| |-.+|+-|.++|++|+..=.
T Consensus 18 ~~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~ 51 (524)
T 3hn7_A 18 QGMHIHILGICGTF----MGSLALLARALGHTVTGSDA 51 (524)
T ss_dssp -CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred cCCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECC
Confidence 35899999999876 77899999999999988543
No 382
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=23.17 E-value=68 Score=27.21 Aligned_cols=38 Identities=18% Similarity=0.129 Sum_probs=30.0
Q ss_pred CceEEEEc--CCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012613 14 GKRVILFP--LPYQGHINPMLQIASVLYSK-GFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~--~~~~GH~~p~~~La~~L~~r-Gh~V~~~~~~ 51 (460)
+++++.+. -|+.|-..-...||..|+++ |++|.++-..
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 34544443 45779999999999999999 9999998765
No 383
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.12 E-value=85 Score=26.51 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=23.4
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 16 RVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.++++.++ |- --..+|++|+++|++|+++...
T Consensus 4 k~vlITGas-~g--IG~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 4 GKVIVYGGK-GA--LGSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp EEEEEETTT-SH--HHHHHHHHHHHTTEEEEEEESS
T ss_pred CEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEecC
Confidence 445555554 32 3468999999999999987653
No 384
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=23.07 E-value=1.3e+02 Score=26.34 Aligned_cols=38 Identities=8% Similarity=0.002 Sum_probs=23.1
Q ss_pred CCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEE
Q 012613 272 PKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVV 309 (460)
Q Consensus 272 ~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 309 (460)
++.+.++............+..+.+++++.|+.+++..
T Consensus 4 ~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 41 (305)
T 3g1w_A 4 NETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRG 41 (305)
T ss_dssp -CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 44566666544333334455667777778898888754
No 385
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=23.07 E-value=2.2e+02 Score=25.95 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=23.5
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.|+|++.. +.|.+ -..|+++|.++||+|+.+.-.
T Consensus 29 ~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITG--AGGFI--ASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEC--CccHH--HHHHHHHHHHCCCeEEEEECC
Confidence 45665553 33444 356889999999999988754
No 386
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=23.06 E-value=44 Score=28.84 Aligned_cols=31 Identities=29% Similarity=0.311 Sum_probs=23.9
Q ss_pred CeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.||+|| +|+.. ..++.=|.++|||+|.+..+
T Consensus 114 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 146 (241)
T 2xzm_B 114 EPRVLIVTDPRSDFQAIKEASYVNIPVIALCDS 146 (241)
T ss_dssp CCSEEEESCTTTTHHHHHHHTTTTCCEEECCCS
T ss_pred CCCEEEEECCCcchHHHHHHHHhCCCEEEEecC
Confidence 688876 67665 55667799999999998654
No 387
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=23.04 E-value=1.3e+02 Score=25.37 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=23.2
Q ss_pred ceEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEE
Q 012613 15 KRVILFPLPYQG----HINPMLQIASVLYSKGFSITI 47 (460)
Q Consensus 15 ~~Il~~~~~~~G----H~~p~~~La~~L~~rGh~V~~ 47 (460)
++|.+++....+ ...-...|++.|+++|+.|+.
T Consensus 14 ~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVs 50 (215)
T 2a33_A 14 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVY 50 (215)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEE
Confidence 469988555443 234567889999999988754
No 388
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=23.02 E-value=89 Score=28.25 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=24.3
Q ss_pred CCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 11 PRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 11 ~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+|.+|+|++... .|.+- ..|+++|.++||+|+.++-.
T Consensus 7 ~M~~~~IlVtGa--tG~iG--~~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 7 PSPKGRVLIAGA--TGFIG--QFVATASLDAHRPTYILARP 43 (346)
T ss_dssp ----CCEEEECT--TSHHH--HHHHHHHHHTTCCEEEEECS
T ss_pred CCCCCeEEEECC--CcHHH--HHHHHHHHHCCCCEEEEECC
Confidence 355677776643 34433 56889999999999998764
No 389
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=22.99 E-value=59 Score=28.43 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=23.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|+|+..|..| ..+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 578888766544 4678899999999888744
No 390
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=22.91 E-value=28 Score=31.05 Aligned_cols=33 Identities=21% Similarity=0.070 Sum_probs=26.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.|||+|+..|+.|- .+|..|++.||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 37899998887663 6788899999999998764
No 391
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=22.91 E-value=78 Score=28.42 Aligned_cols=34 Identities=15% Similarity=0.290 Sum_probs=24.2
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++|+|++. |+.|.+- ..|+++|.++||+|+.+.-
T Consensus 19 ~~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TCCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred CCCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 35676655 3334443 5789999999999998875
No 392
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=22.89 E-value=1.1e+02 Score=26.79 Aligned_cols=34 Identities=29% Similarity=0.340 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.++++++.++.| --..+|++|+++|++|.++..
T Consensus 28 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 28 ARPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 4567777766642 346899999999999998764
No 393
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=22.82 E-value=70 Score=28.23 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=23.0
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++|++. |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 3 ~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 3 NKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECC
T ss_pred cEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECC
Confidence 556555 3345553 46789999999999987754
No 394
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=22.78 E-value=1.2e+02 Score=28.16 Aligned_cols=27 Identities=11% Similarity=-0.063 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHhhCCCceEEEEcCCc
Q 012613 287 DETEFLEIAWGLANSRVPFLWVVRPGL 313 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~ 313 (460)
+.+....+.+++.+...+.||.+.++.
T Consensus 94 d~~Ra~dL~~af~Dp~i~aI~~~rGGy 120 (371)
T 3tla_A 94 IKERAQEFNELVYNPDITCIMSTIGGD 120 (371)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEESCCCS
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 455677799999888888899887654
No 395
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=22.76 E-value=54 Score=27.83 Aligned_cols=116 Identities=15% Similarity=0.042 Sum_probs=59.4
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCeEEEEcCCCCCCCccCccc-HH---HHHHHHHHhc----
Q 012613 26 GHINPMLQIASVLYSKGFSITIIHTNLNPLNAC----NYPHFEFHSISASLSETEASTED-MV---AILIALNAKC---- 93 (460)
Q Consensus 26 GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~----~~~gi~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~---- 93 (460)
-++.-...+....+++|-+|.|+++........ ...|..++ ......+..+... .. ..+..+....
T Consensus 40 ~~L~~A~~~i~~~~~~~~~iLfVgTk~~~~~~V~~~A~~~g~~yv--~~rWlgG~LTN~~ti~~~i~~l~~le~~~~~~~ 117 (218)
T 3r8n_B 40 PMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFV--NHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 117 (218)
T ss_dssp GGTTTHHHHHHHHHHTTCCCCEECCCTTTTTTTTTHHHHSSCCEE--CSSCCSSSSTTTTTTHHHHHHHHHHHTTTSSSS
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHHcCCeeE--CCccCCCCccCHHHHHHHHHHHHHHHHHHhcch
Confidence 455566677788888999999999874443221 11233232 1122222221111 11 1122211111
Q ss_pred --------chhHHHHHHHhhc----cCCCCCCCeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 94 --------VVPFWDCLVKLTS----ISNVQEDSFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 94 --------~~~l~~~l~~l~~----~~~~~~~~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
...+...++++.+ +..... .||+|| +|+.. ..+..=|.++|||+|.+..+
T Consensus 118 f~~l~Kke~~~~~re~~kl~k~lgGik~m~~-~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDT 181 (218)
T 3r8n_B 118 FDKLTKKEALMRTRELEKLENSLGGIKDMGG-LPDALFVIDADHEHIAIKEANNLGIPVFAIVDT 181 (218)
T ss_dssp CSSSCTTTTTTTHHHHHHHHSSSSSSSSCSS-CCCSCEEEETGGGHHHHHHHHHHTCCCEEECCS
T ss_pred hhhccHHHHHHHHHHHHHHHHhhcccccccc-CCCeEEecCcccccHHHHHHHHhCCCEEEEEeC
Confidence 1123334444432 000112 588754 78776 55666799999999998654
No 396
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=22.75 E-value=70 Score=27.08 Aligned_cols=93 Identities=13% Similarity=0.031 Sum_probs=0.0
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
+...+|+-|.-.. .+....++..+.+-+++=+......+.+.....+.+-+ .+.++---..++-..+-
T Consensus 40 ~g~~lV~GGg~~G----lM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~~~~~~~--------~~~~~~~Rk~~~~~~sd 107 (216)
T 1ydh_A 40 RKIDLVYGGGSVG----LMGLISRRVYEGGLHVLGIIPKALMPIEISGETVGDVR--------VVADMHERKAAMAQEAE 107 (216)
T ss_dssp TTCEEEECCCSSH----HHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSSCCSEEE--------EESSHHHHHHHHHHHCS
T ss_pred CCCEEEECCCccc----HhHHHHHHHHHcCCcEEEEechhcCccccccCCCCccc--------ccCCHHHHHHHHHHhCC
Q ss_pred cceeeccCchhHHHhH---------hcCCceeec
Q 012613 353 GGFLTHGGWNSTLESI---------CEGVPMICQ 377 (460)
Q Consensus 353 ~~~I~HGG~gs~~eal---------~~GvP~v~~ 377 (460)
..++--||.||+-|.. .+++|++++
T Consensus 108 a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll 141 (216)
T 1ydh_A 108 AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLL 141 (216)
T ss_dssp EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEe
No 397
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=22.64 E-value=1.5e+02 Score=21.78 Aligned_cols=40 Identities=10% Similarity=0.086 Sum_probs=31.0
Q ss_pred CCCCceEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeC
Q 012613 11 PRNGKRVILFPLPYQGHINP-MLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 11 ~~~~~~Il~~~~~~~GH~~p-~~~La~~L~~rGh~V~~~~~ 50 (460)
..+.+||++++..+.|.-.- ...+-+.+.+.|.++.+-..
T Consensus 18 ~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 18 QGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp SCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 34467899999999998774 67777888889998765443
No 398
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=22.56 E-value=53 Score=30.64 Aligned_cols=40 Identities=18% Similarity=0.061 Sum_probs=29.5
Q ss_pred CCCceEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 012613 12 RNGKRVILFPLPYQGHI----NPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~----~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|+++||+++..|..+=- .....++++|.+.||+|+.+...
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 56889988887755443 44458889998889999987653
No 399
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=22.56 E-value=75 Score=28.56 Aligned_cols=30 Identities=7% Similarity=0.084 Sum_probs=20.5
Q ss_pred CeeEEEECCcc-hhHHHHHHHcCCCeEEEeC
Q 012613 114 SFACIITDPLW-YFVHAVANDFKLPTIILQT 143 (460)
Q Consensus 114 ~pDlvi~D~~~-~~~~~vA~~lgIP~v~~~~ 143 (460)
+||+||..... .....--+..|||++.+..
T Consensus 84 ~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 84 KPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp CCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 89999986543 2223334567999999754
No 400
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=22.52 E-value=93 Score=22.87 Aligned_cols=44 Identities=14% Similarity=-0.047 Sum_probs=28.7
Q ss_pred cccccCCCCceEEEEcCCCccCHHHHH-HHHHHHHhCCCe-EEEEe
Q 012613 6 ESCRLPRNGKRVILFPLPYQGHINPML-QIASVLYSKGFS-ITIIH 49 (460)
Q Consensus 6 ~~~~~~~~~~~Il~~~~~~~GH~~p~~-~La~~L~~rGh~-V~~~~ 49 (460)
+.++-..+.+||++++..+.|.-.-.. .+-+.+.++|.+ +.+-.
T Consensus 10 ~~~~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~ 55 (110)
T 3czc_A 10 GQQMGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESAS 55 (110)
T ss_dssp --------CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred cccccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 334333446789999999998888777 777778888987 65533
No 401
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=22.47 E-value=1.2e+02 Score=27.01 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=25.6
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~ 49 (460)
+++|+|+++... .......+.|.+.||+|.+..
T Consensus 5 ~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 567899888543 356677899999999998763
No 402
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=22.46 E-value=1.8e+02 Score=26.37 Aligned_cols=110 Identities=10% Similarity=-0.046 Sum_probs=56.9
Q ss_pred CeEEEEEccCcccCCHHHHHHHHHHHhhC-CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCC
Q 012613 273 KSVIYVSFGSVVNIDETEFLEIAWGLANS-RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPA 351 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~ 351 (460)
-++.+|..|.++. ...+.++.+. +.+++.++.... + ....+.++. -+..+-+..+++..++
T Consensus 28 ~rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~----~----~~~~~a~~~----g~~~~~~~~~ll~~~~ 89 (350)
T 3rc1_A 28 IRVGVIGCADIAW------RRALPALEAEPLTEVTAIASRRW----D----RAKRFTERF----GGEPVEGYPALLERDD 89 (350)
T ss_dssp EEEEEESCCHHHH------HTHHHHHHHCTTEEEEEEEESSH----H----HHHHHHHHH----CSEEEESHHHHHTCTT
T ss_pred eEEEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcCCH----H----HHHHHHHHc----CCCCcCCHHHHhcCCC
Confidence 3578888887652 1355566655 445544443321 0 011121111 1223345678887766
Q ss_pred ccceeeccC----chhHHHhHhcCCceeec-cccc--chhh-hHHHhhhhheeeEecC
Q 012613 352 VGGFLTHGG----WNSTLESICEGVPMICQ-PYLG--DQMV-NARYISHVWRLGLHLD 401 (460)
Q Consensus 352 ~~~~I~HGG----~gs~~eal~~GvP~v~~-P~~~--DQ~~-na~~v~~~~G~G~~l~ 401 (460)
+.+++.--- .-.+.+|+.+|+++++= |+.. +|-. ..+..++ .|+-+.+.
T Consensus 90 ~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~-~g~~~~v~ 146 (350)
T 3rc1_A 90 VDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARE-RGLLLMEN 146 (350)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHH-TTCCEEEE
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH-hCCEEEEE
Confidence 655664322 33567889999997762 6544 3332 3344444 35554443
No 403
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=22.40 E-value=1.3e+02 Score=24.13 Aligned_cols=39 Identities=23% Similarity=0.412 Sum_probs=34.0
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++++.|++...++.|=..-...|++.|..+|+.|.++..
T Consensus 11 ~~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~ 49 (186)
T 2yvu_A 11 EKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDG 49 (186)
T ss_dssp SCCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeH
Confidence 456788899899999999999999999999999988754
No 404
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=22.40 E-value=37 Score=30.74 Aligned_cols=40 Identities=13% Similarity=0.017 Sum_probs=26.0
Q ss_pred cccccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEeC
Q 012613 6 ESCRLPRNGKRVILFPLPYQGHINPMLQIASVLYSKG----FSITIIHT 50 (460)
Q Consensus 6 ~~~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rG----h~V~~~~~ 50 (460)
++....++.|+|.|+-.|..| ..+|..|.+.| |+|+++..
T Consensus 14 ~~~~~~~~~mkI~iIG~G~mG-----~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 14 GTENLYFQSMSVGFIGAGQLA-----FALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp --------CCCEEEESCSHHH-----HHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCchhccCCCEEEEECCCHHH-----HHHHHHHHHCCCCCcceEEEECC
Confidence 344455678999999887655 46788899999 89988754
No 405
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=22.35 E-value=1.3e+02 Score=27.62 Aligned_cols=36 Identities=11% Similarity=0.151 Sum_probs=25.2
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcC
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRP 311 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (460)
++++++.|+.+. ...+..++++|.+.|.++.+.+..
T Consensus 17 rIl~~~~~~~gh--~~~~~~La~~L~~~GheV~v~~~~ 52 (398)
T 4fzr_A 17 RILVIAGCSEGF--VMPLVPLSWALRAAGHEVLVAASE 52 (398)
T ss_dssp EEEEECCSSHHH--HGGGHHHHHHHHHTTCEEEEEEEG
T ss_pred EEEEEcCCCcch--HHHHHHHHHHHHHCCCEEEEEcCH
Confidence 577887775432 223556889999889888887754
No 406
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=22.34 E-value=93 Score=27.16 Aligned_cols=34 Identities=21% Similarity=0.105 Sum_probs=25.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --..+|++|+++|++|+++..
T Consensus 9 ~~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 9 EGKTALITGGARG---MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 3456667766643 346899999999999988765
No 407
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=22.32 E-value=1.2e+02 Score=22.26 Aligned_cols=36 Identities=17% Similarity=0.012 Sum_probs=28.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|||++++..+.|+-.-...+-+.+.++|.++.+-..
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 789999999888886667788888888998766444
No 408
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=22.32 E-value=1.2e+02 Score=21.56 Aligned_cols=34 Identities=6% Similarity=-0.003 Sum_probs=25.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+...|++++..+ ......++.|...||+|.++..
T Consensus 55 ~~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 55 KNEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TTSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 456788888544 2466788999999999887754
No 409
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=22.23 E-value=84 Score=27.73 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=31.4
Q ss_pred CceEEEEc---CCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFP---LPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~---~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.|+|.. -|+.|=..-...||..|+++|++|.++=..
T Consensus 34 ~~~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D 74 (298)
T 2oze_A 34 NEAIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKD 74 (298)
T ss_dssp CSCEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CcEEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 35566664 678899999999999999999999987554
No 410
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=22.22 E-value=98 Score=26.87 Aligned_cols=32 Identities=16% Similarity=0.099 Sum_probs=23.9
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 16 RVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 16 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.++++.++. - --..+|++|+++|++|+++..
T Consensus 12 k~~lVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGAR-R--IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 4566666653 2 346789999999999998765
No 411
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=22.19 E-value=96 Score=26.66 Aligned_cols=34 Identities=12% Similarity=0.026 Sum_probs=24.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|.++++.++.| --..+|++|+++|++|.++..
T Consensus 7 ~gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 7 QGKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3456666666542 346899999999999988764
No 412
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=22.19 E-value=1.1e+02 Score=27.36 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=23.9
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+.++++.++ |-+ -..+|++|+++|++|.++.-
T Consensus 8 ~k~vlVTGas-~gI--G~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 8 GRTAFVTGGA-NGV--GIGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp TCEEEEETTT-STH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEcCCc-hHH--HHHHHHHHHHCCCEEEEEEC
Confidence 4556666655 333 45799999999999888765
No 413
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=22.07 E-value=1.4e+02 Score=22.01 Aligned_cols=48 Identities=8% Similarity=-0.060 Sum_probs=34.8
Q ss_pred cCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhcc
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~ 419 (460)
..+|+|++.-..+.... ....+ .|+--.+.+.++.+.|.++|+++++.
T Consensus 78 ~~~~ii~~s~~~~~~~~-~~~~~-~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 78 AKPYVIVISAFSEMKYF-IKAIE-LGVHLFLPKPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp CCCEEEECCCCCCHHHH-HHHHH-HCCSEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcChHHH-HHHHh-CCcceeEcCCCCHHHHHHHHHHHHHH
Confidence 46788887666554433 33445 37776777779999999999999986
No 414
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=22.07 E-value=1e+02 Score=27.15 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=24.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~ 49 (460)
.++++++.++.| --..+|++|+++|++|+++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 456677766643 35689999999999999887
No 415
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=22.03 E-value=80 Score=27.48 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=24.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
|+|++.. + |.+- ..|+++|.++||+|+.++-.
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 6777775 4 5554 46789999999999998764
No 416
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=22.01 E-value=1e+02 Score=26.27 Aligned_cols=38 Identities=5% Similarity=-0.085 Sum_probs=23.8
Q ss_pred HHHhhccCCCCCCCeeEEEECCcc--hhHHHHHHHcCCCeEEEeCc
Q 012613 101 LVKLTSISNVQEDSFACIITDPLW--YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 101 l~~l~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~lgIP~v~~~~~ 144 (460)
+|.+.+ . +||+||+.... .....--+..|||++.+...
T Consensus 50 ~E~i~~-----l-~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~ 89 (245)
T 1n2z_A 50 LERIVA-----L-KPDLVIAWRGGNAERQVDQLASLGIKVMWVDAT 89 (245)
T ss_dssp HHHHHH-----T-CCSEEEECTTTSCHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHhc-----c-CCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCC
Confidence 555555 3 89999985322 22333445779999986543
No 417
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=21.99 E-value=45 Score=29.91 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.++|.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 9 ~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp SCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 5789999776655 4789999999999988643
No 418
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=21.99 E-value=2.4e+02 Score=22.93 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=29.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+||+|+.+++. ...-+....+.|...|++|+++++.
T Consensus 3 ~~~v~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 39 (197)
T 2rk3_A 3 SKRALVILAKGA-EEMETVIPVDVMRRAGIKVTVAGLA 39 (197)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCEEEEEECCCC-cHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 468888888764 5556677788899999999999975
No 419
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=21.97 E-value=2.8e+02 Score=25.37 Aligned_cols=131 Identities=9% Similarity=0.019 Sum_probs=67.7
Q ss_pred CeEEEEEccCcccCCH-HHHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCC
Q 012613 273 KSVIYVSFGSVVNIDE-TEFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPA 351 (460)
Q Consensus 273 ~~vI~vs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~ 351 (460)
++++++ .|-.....- .+...+++-+++.+++-++.+++-.. ..|. - .-+.+.......+++....
T Consensus 142 ~~~LlL-~G~eP~~~w~~fa~~vl~~a~~~gV~~vvtLgglp~-------~vph-t-----Rp~~V~~~at~~el~~~~~ 207 (351)
T 2wam_A 142 TPFLLL-AGLEPDLKWERFITAVRLLAERLGVRQTIGLGTVPM-------AVPH-T-----RPITMTAHSNNRELISDFQ 207 (351)
T ss_dssp CEEEEE-EEECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEE-------SCCT-T-----SCCCEEEEESSGGGGTTSC
T ss_pred CcEEEE-ECCCChhHHHHHHHHHHHHHHHhCCCEEEEEecccC-------CCCC-c-----cCcceEEEECCHHHHHhcC
Confidence 444444 466554333 55666888899999998888765321 1110 0 0001221112233332222
Q ss_pred c--cceeeccCchhH--HHhHhcCCceeec----ccccch---hhhHH----HhhhhheeeEecCC---ccCHHHHHHHH
Q 012613 352 V--GGFLTHGGWNST--LESICEGVPMICQ----PYLGDQ---MVNAR----YISHVWRLGLHLDG---NVERREIEIAV 413 (460)
Q Consensus 352 ~--~~~I~HGG~gs~--~eal~~GvP~v~~----P~~~DQ---~~na~----~v~~~~G~G~~l~~---~~~~~~l~~ai 413 (460)
+ .-+---+|+.++ .++...|+|.+++ |...=| |.=|. .+++. +|+.++. .-.++++++.|
T Consensus 208 ~~~~~~~gp~GisglL~~~~~~~Gi~a~~l~~~vP~Yla~~pdP~AA~alL~~L~~l--lgl~ip~~~L~e~Ae~ie~~i 285 (351)
T 2wam_A 208 PSISEIQVPGSASNLLEYRMAQHGHEVVGFTVHVPHYLTQTDYPAAAQALLEQVAKT--GSLQLPLAVLAEAAAEVQAKI 285 (351)
T ss_dssp CCCCSEEEECCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHH--HTCCCCCHHHHHHHHHHHHHH
T ss_pred CccCcccccccHHHHHHHHHHHcCCCEEEEEEeCCccccCCCCHHHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHHHHH
Confidence 1 012234454444 4567889999997 553222 33332 33332 3555554 45667888888
Q ss_pred HHHhcc
Q 012613 414 RRVMIE 419 (460)
Q Consensus 414 ~~vl~~ 419 (460)
+++.++
T Consensus 286 ~el~~~ 291 (351)
T 2wam_A 286 DEQVQA 291 (351)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 888864
No 420
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=21.93 E-value=1e+02 Score=26.04 Aligned_cols=32 Identities=19% Similarity=0.156 Sum_probs=21.9
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 16 RVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 16 ~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.++++.++ |.+ -..++++|+++||+|+++.-
T Consensus 2 k~vlVtGas-g~i--G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 2 SVIAITGSA-SGI--GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCC-cHH--HHHHHHHHHhCCCEEEEEeC
Confidence 344444443 433 35688999999999998765
No 421
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=21.93 E-value=86 Score=29.01 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=30.2
Q ss_pred CceEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQ-GHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~-GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.++|+++.=-+. .-+.=++.|++.|.++|++|++++-.
T Consensus 212 ~k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~ 250 (367)
T 1xfi_A 212 WKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANE 250 (367)
T ss_dssp CCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBS
T ss_pred CCEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECC
Confidence 478999987773 34545589999999999999987764
No 422
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=21.80 E-value=2.2e+02 Score=22.11 Aligned_cols=38 Identities=18% Similarity=0.047 Sum_probs=28.4
Q ss_pred CceEEEEcCCCcc---CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQG---HINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~G---H~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
...++++++|+.+ ...-+..++++|.+.+.++++++..
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 60 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDG 60 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCS
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECC
Confidence 3467788888876 4556677888898778888887764
No 423
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=21.78 E-value=1.2e+02 Score=25.58 Aligned_cols=37 Identities=11% Similarity=0.124 Sum_probs=26.2
Q ss_pred ceEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGH--INPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH--~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
..++++..|..|+ ...+..+++.|.++|+.|..+-.+
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 4444555554445 666889999999999998876543
No 424
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=21.72 E-value=1.5e+02 Score=26.31 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=24.3
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.++|+|++. |+.|.+- ..|+++|.++||+|+.+.-
T Consensus 9 ~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 9 PEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp CTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 445676655 3334443 5688999999999998765
No 425
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=21.71 E-value=1.1e+02 Score=26.59 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=24.9
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|.++++.++.| --..+|++|+++|++|.++..
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 456667766643 346899999999999988776
No 426
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=21.69 E-value=1.1e+02 Score=27.92 Aligned_cols=38 Identities=21% Similarity=0.271 Sum_probs=31.0
Q ss_pred ceEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012613 15 KRVILFP-LPYQGHINPMLQIASVLYSKGFSITIIHTNL 52 (460)
Q Consensus 15 ~~Il~~~-~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~ 52 (460)
++|+|+. -|+.|-..-...||..|+++|++|.++....
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4454444 4567999999999999999999999999864
No 427
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=21.68 E-value=69 Score=29.76 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=27.3
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++..+|+++-.|..| +.+|..|+++|++|+++=.
T Consensus 24 ~~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp CTTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEEC
T ss_pred cCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeC
Confidence 455689988877654 6789999999999999855
No 428
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=21.65 E-value=76 Score=27.40 Aligned_cols=38 Identities=21% Similarity=0.139 Sum_probs=26.7
Q ss_pred HHHHHhhccCCCCCCCeeEEEECCcch-------hHHHHHHHcCCCeEEEeC
Q 012613 99 DCLVKLTSISNVQEDSFACIITDPLWY-------FVHAVANDFKLPTIILQT 143 (460)
Q Consensus 99 ~~l~~l~~~~~~~~~~pDlvi~D~~~~-------~~~~vA~~lgIP~v~~~~ 143 (460)
++++++.. +||++++|.... .|..+.-.+++|+|.+.=
T Consensus 101 ~al~~L~~-------~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 145 (246)
T 3ga2_A 101 EAAKKLET-------EPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAK 145 (246)
T ss_dssp HHHHHCSS-------CCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred HHHHhcCC-------CCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeec
Confidence 44555544 899999997652 234567778999999753
No 429
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=21.64 E-value=91 Score=27.32 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=24.2
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|+++++.++.| --..+|++|+++|++|+++..
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 456666666542 346899999999999988754
No 430
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=21.61 E-value=1e+02 Score=26.50 Aligned_cols=35 Identities=17% Similarity=0.089 Sum_probs=23.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.+.++++.++..-+ -..+|++|+++|++|+++.-
T Consensus 21 ~~k~vlITGasg~GI--G~~~a~~l~~~G~~V~~~~r 55 (266)
T 3o38_A 21 KGKVVLVTAAAGTGI--GSTTARRALLEGADVVISDY 55 (266)
T ss_dssp TTCEEEESSCSSSSH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCCch--HHHHHHHHHHCCCEEEEecC
Confidence 345566665531123 35899999999999988765
No 431
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=21.59 E-value=49 Score=31.29 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=24.8
Q ss_pred ccccccccCCC--C--ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 3 TKQESCRLPRN--G--KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 3 ~~~~~~~~~~~--~--~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+++.+|....+ + .+|+|+-.|-.| +.+|..|+++|++|+++-..
T Consensus 7 ~~~~~~~~~~~~~~m~~~ViIVGaGpaG-----l~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 7 HHHHSSGLVPRGSHMKKRIGIVGAGTAG-----LHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp ----------------CEEEEECCHHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cccccceeecccCcCCCCEEEECCcHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 45677775543 3 467877666544 67899999999999998653
No 432
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=21.56 E-value=1e+02 Score=22.46 Aligned_cols=47 Identities=9% Similarity=0.098 Sum_probs=33.6
Q ss_pred cCCceeecccccchhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhc
Q 012613 370 EGVPMICQPYLGDQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMI 418 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~ 418 (460)
..+|+|++--..+.. ...+..+ .|+--.+.+.++.++|.++|++++.
T Consensus 75 ~~~pii~~s~~~~~~-~~~~~~~-~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGGEE-DESLALS-LGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCSHH-HHHHHHH-TTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCchH-HHHHHHh-cChhhhccCCCCHHHHHHHHHHHhc
Confidence 368888877655443 3444455 4776667667899999999999875
No 433
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=21.54 E-value=98 Score=27.28 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.|+++++.++.| --..+|++|+++|++|+++...
T Consensus 46 ~gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 46 KGKNVLITGGDSG---IGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3466777766643 3468999999999999887653
No 434
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=21.51 E-value=4.2e+02 Score=23.34 Aligned_cols=106 Identities=9% Similarity=0.095 Sum_probs=58.6
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCC--CCCCCCCCCCeEEEEcCCCCCCCccCcccHHHHHH
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSK--GFSITIIHTNL--NPLNACNYPHFEFHSISASLSETEASTEDMVAILI 87 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~r--Gh~V~~~~~~~--~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
.+++||+++.++. || -+..|..+-.+- ..+|..+.+.. .....++..|+.+..+|.... + -
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~gIp~~~~~~~~~----~---r----- 151 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDIPFYHFPVNKD----T---R----- 151 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTCCEEECCCCTT----T---H-----
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcCCCEEEeCCCcc----c---H-----
Confidence 4578999998887 55 445555555433 24777665532 122233346888888774321 0 0
Q ss_pred HHHHhcchhHHHHHHHhhccCCCCCCCeeEEEECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 88 ALNAKCVVPFWDCLVKLTSISNVQEDSFACIITDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~~pDlvi~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
...... +++.+.+ . +||+||.-.+. .....+-+.+.-.++-++++
T Consensus 152 ---~~~~~~---~~~~l~~-----~-~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 152 ---RQQEAA---ITALIAQ-----T-HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp ---HHHHHH---HHHHHHH-----H-TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ---HHHHHH---HHHHHHh-----c-CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 001112 2333333 2 78999977654 33444555566667777665
No 435
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=21.49 E-value=1e+02 Score=26.38 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=24.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++. - --..+|++|+++|++|.++..
T Consensus 11 ~~k~vlVTGas~-g--IG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 11 NDRIILVTGASD-G--IGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TTCEEEEESTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCC-h--HHHHHHHHHHHCCCEEEEEeC
Confidence 356667766653 2 246889999999999988764
No 436
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=21.47 E-value=1.7e+02 Score=24.74 Aligned_cols=37 Identities=8% Similarity=0.017 Sum_probs=29.3
Q ss_pred CceEEEEcC-----CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPL-----PYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~-----~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
.+||+|+.+ ++. -..=+....+.|...|++|+++++.
T Consensus 6 m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~ 47 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPD 47 (232)
T ss_dssp CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecC
Confidence 368988888 553 5666777778899999999999985
No 437
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=21.41 E-value=4.3e+02 Score=23.50 Aligned_cols=117 Identities=11% Similarity=0.078 Sum_probs=70.9
Q ss_pred HHHHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHh
Q 012613 290 EFLEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESIC 369 (460)
Q Consensus 290 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~ 369 (460)
.-..+++.+++.+..+++..+.. .-+|+.+.+..+.+++=. |-.+|| ...|.+....|+.
T Consensus 169 ~~~~~~~~l~~~~~DliVlagym--------~IL~~~~l~~~~~~~INi----HpSlLP--------~frG~~p~~~Ai~ 228 (302)
T 3o1l_A 169 AFAEVSRLVGHHQADVVVLARYM--------QILPPQLCREYAHQVINI----HHSFLP--------SFVGAKPYHQASL 228 (302)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCC--------SCCCTTHHHHTTTCEEEE----ESSCTT--------SSCSSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEHhHhh--------hhcCHHHHhhhhCCeEEe----Cccccc--------CCCCccHHHHHHH
Confidence 34557788888888888887753 337777765554332211 112332 2458899999999
Q ss_pred cCCceeeccccc--chhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhccccHHHHHHHHHHHH
Q 012613 370 EGVPMICQPYLG--DQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETEGQEMRERILYSK 433 (460)
Q Consensus 370 ~GvP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~ 433 (460)
+|+...++-.+. +..+-+..+... -+.+...-|.+.|.+.+.++-.. .|.+..+.+.
T Consensus 229 ~G~k~tG~TvH~v~~~lD~GpII~Q~---~v~I~~~dt~~~L~~r~~~~e~~----~l~~av~~~~ 287 (302)
T 3o1l_A 229 RGVKLIGATCHYVTEELDAGPIIEQD---VVRVSHRDSIENMVRFGRDVEKM----VLARGLRAHL 287 (302)
T ss_dssp HTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred cCCCeEEEEEEEECCCCcCCCeEEEE---EEecCCCCCHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 999999988653 333333333331 22333356888888888766443 5666555543
No 438
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=21.40 E-value=73 Score=28.37 Aligned_cols=31 Identities=23% Similarity=0.096 Sum_probs=23.9
Q ss_pred CeeEEE-ECCcc-hhHHHHHHHcCCCeEEEeCc
Q 012613 114 SFACII-TDPLW-YFVHAVANDFKLPTIILQTS 144 (460)
Q Consensus 114 ~pDlvi-~D~~~-~~~~~vA~~lgIP~v~~~~~ 144 (460)
.||+|| +|+.. ..++.=|.++|||+|.++.+
T Consensus 122 ePdllvV~Dp~~d~qAI~EA~~lnIPtIALvDT 154 (305)
T 3iz6_A 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDT 154 (305)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECT
T ss_pred CCceeEEeCcccchHHHHHHHHcCCCEEEEEcC
Confidence 578765 77765 55666799999999998765
No 439
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=21.39 E-value=1e+02 Score=26.09 Aligned_cols=33 Identities=12% Similarity=0.115 Sum_probs=23.7
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++.++++.++.| --..+|++|+++|++|.++.-
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 345666655532 346889999999999988765
No 440
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=21.36 E-value=1.8e+02 Score=26.87 Aligned_cols=36 Identities=14% Similarity=0.023 Sum_probs=26.5
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhCCCceEEEEcC
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLWVVRP 311 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (460)
+++++++|+.+. ..-+..++++|.+.|.++.+.+..
T Consensus 22 rIl~~~~~~~GH--v~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 22 HLLIVNVASHGL--ILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp EEEEECCSCHHH--HGGGHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEeCCCccc--cccHHHHHHHHHHCCCEEEEEeCH
Confidence 688888886553 233456888998889998888754
No 441
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=21.35 E-value=2.7e+02 Score=24.57 Aligned_cols=115 Identities=12% Similarity=0.119 Sum_probs=68.6
Q ss_pred HHHHHHHhhCCCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCccceeeccCchhHHHhHhcC
Q 012613 292 LEIAWGLANSRVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAVGGFLTHGGWNSTLESICEG 371 (460)
Q Consensus 292 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~~~~I~HGG~gs~~eal~~G 371 (460)
..+++.+++.+..+++..+.. .-+|+.+.+..+.+++=. |-.+|| ...|.+....|+.+|
T Consensus 156 ~~~~~~l~~~~~Dlivla~y~--------~il~~~~l~~~~~~~iNi----HpSlLP--------~~rG~~p~~~Ai~~G 215 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARYM--------QVLSPELCRRLDGWAINI----HHSLLP--------GFKGAKPYHQAYNKG 215 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSCC--------SCCCHHHHHHTTTSEEEE----EECSST--------TCCCSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEecccc--------cccCHHHHhhhcCCeEEe----cccccc--------CCCCccHHHHHHHcC
Confidence 457777777788888877653 337777755544322211 112232 235889999999999
Q ss_pred Cceeeccccc--chhhhHHHhhhhheeeEecCCccCHHHHHHHHHHHhccccHHHHHHHHHHHH
Q 012613 372 VPMICQPYLG--DQMVNARYISHVWRLGLHLDGNVERREIEIAVRRVMIETEGQEMRERILYSK 433 (460)
Q Consensus 372 vP~v~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~ai~~vl~~~~~~~~~~~a~~~~ 433 (460)
+...++-.+. +..+.+..+... -+.+...-|.+.|.+.+.++-.. .|.+..+.+.
T Consensus 216 ~~~~G~Tvh~v~~~lD~GpIi~Q~---~~~i~~~dt~~~L~~r~~~~e~~----~l~~av~~~~ 272 (286)
T 3n0v_A 216 VKMVGATAHYINNDLDEGPIIAQG---VEVVDHSHYPEDLIAKGRDIECL----TLARAVGYHI 272 (286)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCceeEEE---EEEcCCCCCHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999888653 233333333331 22333356888888887766543 5666555544
No 442
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=21.34 E-value=96 Score=24.80 Aligned_cols=27 Identities=15% Similarity=0.266 Sum_probs=22.7
Q ss_pred EEEEEccCcccCCHHHHHHHHHHHhhC
Q 012613 275 VIYVSFGSVVNIDETEFLEIAWGLANS 301 (460)
Q Consensus 275 vI~vs~GS~~~~~~~~~~~~~~al~~~ 301 (460)
.+|+++||........++..++++++.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 29 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQL 29 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhC
Confidence 589999999876777888888888875
No 443
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=21.22 E-value=68 Score=28.34 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=28.7
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNL 52 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~ 52 (460)
++++|+++..|- .....++.|.+.|++|+++.+..
T Consensus 12 ~~k~VLVVGgG~-----va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGE-----VGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESH-----HHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcH-----HHHHHHHHHHhCCCEEEEEcCCC
Confidence 578888886654 56788999999999999998753
No 444
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=21.18 E-value=77 Score=27.49 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=25.0
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++|+++++.++. -+ -..+|++|+++|++|.++..
T Consensus 24 ~~k~vlITGas~-gI--G~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 24 AKRVAFVTGGMG-GL--GAAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHTTTCEEEEEEC
T ss_pred cCCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 456677776663 22 36889999999999988764
No 445
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=21.16 E-value=75 Score=29.50 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=26.8
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
++..+|+++-.|-.| +.+|..|+++|++|+++=.
T Consensus 3 ~~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 3 PTTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CCCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 346788888777544 7789999999999999854
No 446
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=21.11 E-value=99 Score=27.14 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=25.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.|+++++.++.| --..+|++|+++|++|.++.-.
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 3466677766643 3468999999999999887654
No 447
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=21.11 E-value=36 Score=29.57 Aligned_cols=34 Identities=9% Similarity=0.037 Sum_probs=25.9
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKG----FSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rG----h~V~~~~~ 50 (460)
|+.|+|.|+-.|..|. .+|+.|.++| |+|+++..
T Consensus 2 m~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 3468999998776554 4788898889 89988754
No 448
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.09 E-value=52 Score=27.93 Aligned_cols=28 Identities=18% Similarity=0.357 Sum_probs=21.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012613 17 VILFPLPYQGHINPMLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 17 Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~ 49 (460)
|+++-.|-.| +.+|..|+++|++|+++=
T Consensus 5 V~IIGaGpaG-----L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAG-----LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHH-----HHHHHHHHHCCCCEEEEE
Confidence 5666555433 789999999999999973
No 449
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=21.06 E-value=1.3e+02 Score=25.89 Aligned_cols=34 Identities=9% Similarity=0.095 Sum_probs=25.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| + -..+|++|+++|++|+++..
T Consensus 10 ~~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 10 TDKVVVISGVGPA-L--GTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTCEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeC
Confidence 3566777766643 3 46889999999999988764
No 450
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=21.06 E-value=52 Score=29.16 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=24.1
Q ss_pred CCCccceeeccCchhHHHhHhc--C-Cceeeccc
Q 012613 349 HPAVGGFLTHGGWNSTLESICE--G-VPMICQPY 379 (460)
Q Consensus 349 ~~~~~~~I~HGG~gs~~eal~~--G-vP~v~~P~ 379 (460)
.+|+ +|+=||=||++.|+.. + +|++++..
T Consensus 68 ~~Dl--vIvlGGDGT~L~aa~~~~~~~PilGIN~ 99 (278)
T 1z0s_A 68 NFDF--IVSVGGDGTILRILQKLKRCPPIFGINT 99 (278)
T ss_dssp GSSE--EEEEECHHHHHHHHTTCSSCCCEEEEEC
T ss_pred CCCE--EEEECCCHHHHHHHHHhCCCCcEEEECC
Confidence 5676 9999999999999865 3 88888875
No 451
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=20.97 E-value=1e+02 Score=26.77 Aligned_cols=34 Identities=12% Similarity=0.055 Sum_probs=27.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|++|++.|.+|.++.-
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVEL 39 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4678888888764 357899999999999988654
No 452
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=20.92 E-value=1.4e+02 Score=25.86 Aligned_cols=34 Identities=18% Similarity=0.062 Sum_probs=25.5
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++. -+ -..+|++|+++|++|.++..
T Consensus 17 ~~k~~lVTGas~-gI--G~aia~~l~~~G~~V~~~~~ 50 (270)
T 3is3_A 17 DGKVALVTGSGR-GI--GAAVAVHLGRLGAKVVVNYA 50 (270)
T ss_dssp TTCEEEESCTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 456777777664 22 46899999999999988654
No 453
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=20.90 E-value=1.3e+02 Score=26.78 Aligned_cols=33 Identities=9% Similarity=0.027 Sum_probs=23.2
Q ss_pred ceEEEEcCCC-ccCHHHHHHHHHHHHhCCCeEEEEe
Q 012613 15 KRVILFPLPY-QGHINPMLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 15 ~~Il~~~~~~-~GH~~p~~~La~~L~~rGh~V~~~~ 49 (460)
.|+++++.++ .|-+ -..+|++|+++|++|+++.
T Consensus 9 ~k~~lVTGa~~s~GI--G~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 9 GKTAFVAGVADSNGY--GWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp TCEEEEECCCCTTSH--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCCCcH--HHHHHHHHHHCCCEEEEEe
Confidence 4556666651 2333 3688999999999998875
No 454
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=20.87 E-value=1.2e+02 Score=26.39 Aligned_cols=34 Identities=21% Similarity=0.095 Sum_probs=25.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|.++++.++.| --..+|++|+++|++|.++..
T Consensus 26 ~gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 26 TGRKALVTGATGG---IGEAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3466777766642 346789999999999988765
No 455
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=20.85 E-value=70 Score=28.62 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=25.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|+|.|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 30 ~~~I~iIG~G~mG-----~~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMG-----SGIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp SSCEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCeEEEEcccHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 5889999877655 3578889999999987654
No 456
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=20.84 E-value=1.2e+02 Score=25.93 Aligned_cols=34 Identities=21% Similarity=0.099 Sum_probs=25.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++. - --..+|++|+++|++|.++..
T Consensus 8 ~gk~~lVTGas~-g--IG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 8 EGKVALVTGASR-G--IGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp TTCEEEESSCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 356677776664 2 346899999999999988754
No 457
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=20.84 E-value=88 Score=27.42 Aligned_cols=36 Identities=8% Similarity=-0.168 Sum_probs=23.6
Q ss_pred HHHhhccCCCCCCCeeEEEECCcc--hhHHHHHHHcCCCeEEEe
Q 012613 101 LVKLTSISNVQEDSFACIITDPLW--YFVHAVANDFKLPTIILQ 142 (460)
Q Consensus 101 l~~l~~~~~~~~~~pDlvi~D~~~--~~~~~vA~~lgIP~v~~~ 142 (460)
+|.+.+ . +||+||+.... .....--+..|||++.+.
T Consensus 52 ~E~i~~-----l-~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (283)
T 2r79_A 52 AEGVLA-----L-RPDILIGTEEMGPPPVLKQLEGAGVRVETLS 89 (283)
T ss_dssp HHHHHT-----T-CCSEEEECTTCCCHHHHHHHHHTTCCEEECC
T ss_pred HHHHHh-----c-CCCEEEEeCccCcHHHHHHHHHcCCcEEEec
Confidence 555655 4 89999986542 223344456899998863
No 458
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=20.83 E-value=4.5e+02 Score=23.38 Aligned_cols=110 Identities=13% Similarity=0.076 Sum_probs=57.2
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhC-CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANS-RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.+|.+|.++. ..+.++.+. +.+++.++..+. + ....+.++.. ...-+-+..+++..+++
T Consensus 7 ~igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~----~----~~~~~~~~~~---~~~~~~~~~~ll~~~~~ 68 (330)
T 3e9m_A 7 RYGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRL----E----NAQKMAKELA---IPVAYGSYEELCKDETI 68 (330)
T ss_dssp EEEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSS----H----HHHHHHHHTT---CCCCBSSHHHHHHCTTC
T ss_pred EEEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCH----H----HHHHHHHHcC---CCceeCCHHHHhcCCCC
Confidence 577888887753 345666654 444444443321 0 0111211111 11223456788886555
Q ss_pred cceeeccCch----hHHHhHhcCCceeec-cccc--chhh-hHHHhhhhheeeEecCC
Q 012613 353 GGFLTHGGWN----STLESICEGVPMICQ-PYLG--DQMV-NARYISHVWRLGLHLDG 402 (460)
Q Consensus 353 ~~~I~HGG~g----s~~eal~~GvP~v~~-P~~~--DQ~~-na~~v~~~~G~G~~l~~ 402 (460)
.+++.---.. .+.+|+.+|+++++= |+.. ++-. ..+..++ .|+-..+..
T Consensus 69 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~-~g~~~~v~~ 125 (330)
T 3e9m_A 69 DIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQE-QGVFLMEAQ 125 (330)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHH-TTCCEEECC
T ss_pred CEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH-cCCeEEEEE
Confidence 5566544433 367889999998873 6543 3322 3344455 366555544
No 459
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=20.82 E-value=1.2e+02 Score=22.99 Aligned_cols=33 Identities=18% Similarity=0.289 Sum_probs=23.6
Q ss_pred CceEEEEcCCCccCHH--------HHHHHHHHHHhCCCeEE
Q 012613 14 GKRVILFPLPYQGHIN--------PMLQIASVLYSKGFSIT 46 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~--------p~~~La~~L~~rGh~V~ 46 (460)
-|+.++++.|-.|... -+-..|..|.++||-+.
T Consensus 7 ~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 7 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 3678899999887732 34456677889999654
No 460
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=20.78 E-value=1.3e+02 Score=27.96 Aligned_cols=42 Identities=17% Similarity=-0.026 Sum_probs=23.9
Q ss_pred hhhhccCCCCeEEEEEccCcccCCHHHHHHHHHHHhhCCCceEE
Q 012613 264 ISWLDKHAPKSVIYVSFGSVVNIDETEFLEIAWGLANSRVPFLW 307 (460)
Q Consensus 264 ~~~l~~~~~~~vI~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 307 (460)
.+++.....+++++|+-++.. .....+.+.+.|++.+..+.+
T Consensus 23 ~~~~~~~g~~~~liVtd~~~~--~~g~~~~v~~~L~~~gi~~~~ 64 (383)
T 3ox4_A 23 IKDLNGSGFKNALIVSDAFMN--KSGVVKQVADLLKAQGINSAV 64 (383)
T ss_dssp HHTTTTSCCCEEEEEEEHHHH--HTTHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHcCCCEEEEEECCchh--hCchHHHHHHHHHHcCCeEEE
Confidence 344444334567777654332 112566788888887766543
No 461
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=20.77 E-value=3.8e+02 Score=24.27 Aligned_cols=111 Identities=12% Similarity=0.070 Sum_probs=58.0
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhC-CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANS-RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.+|.+|.+.. ...+.++.+. +.+++.++..+. +....+.+.+ . ...-+-+..++|..+++
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~----~~~~~~a~~~-----~--~~~~~~~~~~ll~~~~v 69 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSDL----ERARRVHRFI-----S--DIPVLDNVPAMLNQVPL 69 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSSH----HHHGGGGGTS-----C--SCCEESSHHHHHHHSCC
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCCH----HHHHHHHHhc-----C--CCcccCCHHHHhcCCCC
Confidence 577888887642 2255666655 445554554321 0011111111 0 11223457888888766
Q ss_pred cceeeccCch----hHHHhHhcCCceeec-ccccc--hhh-hHHHhhhhheeeEecCC
Q 012613 353 GGFLTHGGWN----STLESICEGVPMICQ-PYLGD--QMV-NARYISHVWRLGLHLDG 402 (460)
Q Consensus 353 ~~~I~HGG~g----s~~eal~~GvP~v~~-P~~~D--Q~~-na~~v~~~~G~G~~l~~ 402 (460)
.+++-.--.. -+.+|+.+|+++++= |+..+ +-. ..+..++ .|+-..+..
T Consensus 70 D~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~-~g~~~~v~~ 126 (359)
T 3m2t_A 70 DAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARR-SDVVSGVGM 126 (359)
T ss_dssp SEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH-HTCCEEECC
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHH-cCCEEEEEe
Confidence 6677555433 367788889888773 65443 322 3344444 365554444
No 462
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.76 E-value=92 Score=27.94 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=22.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+|+|++.- +.|.+- ..|+++|.++||+|+++.-
T Consensus 5 ~~~vlVTG--atG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTG--GAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEec--CCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 45665543 334443 5789999999999998764
No 463
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=20.72 E-value=1.2e+02 Score=24.32 Aligned_cols=28 Identities=18% Similarity=0.187 Sum_probs=23.1
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhC
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANS 301 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~ 301 (460)
..+|+++||........++..+++|.+.
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~ 32 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEY 32 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHS
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 4799999999876777888888888874
No 464
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=20.72 E-value=2.1e+02 Score=23.25 Aligned_cols=38 Identities=11% Similarity=0.087 Sum_probs=30.0
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNL 52 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~ 52 (460)
.+||+++.+++.. ..-+....+.|...|++|+++++..
T Consensus 23 ~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 23 SKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5789999888753 4556677888888999999999863
No 465
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=20.70 E-value=1.6e+02 Score=23.47 Aligned_cols=37 Identities=11% Similarity=0.053 Sum_probs=26.8
Q ss_pred CceEEEEcCCCccCHHHHHH--HHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQ--IASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~--La~~L~~rGh~V~~~~~ 50 (460)
+...+++-.|..|+...+.. +++.|.++|+.|..+-.
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 69 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDL 69 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECC
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecC
Confidence 34455555565677777777 69999999999877654
No 466
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=20.69 E-value=90 Score=26.77 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=25.0
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
..++++++.++. -+ -..+|++|+++|++|.++.-
T Consensus 6 ~~k~~lVTGas~-GI--G~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 6 QKGLAIITGASQ-GI--GAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CCCEEEEESTTS-HH--HHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEEC
Confidence 456667776653 23 36899999999999988765
No 467
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=20.67 E-value=1.1e+02 Score=26.35 Aligned_cols=33 Identities=24% Similarity=0.220 Sum_probs=23.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.+.++++.++.| --..+|++|+++|++|+++..
T Consensus 4 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 4 GKVAVVTGSTSG---IGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHcCCEEEEEeC
Confidence 355666665532 346899999999999988654
No 468
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=20.65 E-value=1.5e+02 Score=25.64 Aligned_cols=34 Identities=21% Similarity=0.048 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++. - --..+|++|+++|++|+++..
T Consensus 27 ~~k~~lVTGas~-G--IG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 27 DKQVAIVTGASR-G--IGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp TTCEEEETTCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 456777777664 2 346889999999999988765
No 469
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=20.64 E-value=70 Score=29.45 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=26.2
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 12 RNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+.++|+++-.|..| +.+|..|+++|++|+++=.
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 446789988877654 7789999999999999854
No 470
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=20.60 E-value=1e+02 Score=26.79 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=25.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --..+|++|+++|++|+++..
T Consensus 9 ~gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 9 QDKVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 3456677766642 346899999999999988765
No 471
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=20.60 E-value=97 Score=26.72 Aligned_cols=36 Identities=11% Similarity=0.041 Sum_probs=24.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++..+. .----.++|++|+++|++|.+..-
T Consensus 5 ~gK~alVTGaa~-~~GIG~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 5 ENKTYVIMGIAN-KRSIAFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp TTCEEEEECCCS-TTCHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCC-CchHHHHHHHHHHHCCCEEEEEEC
Confidence 456666666432 111247899999999999988765
No 472
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=20.57 E-value=4.7e+02 Score=23.59 Aligned_cols=107 Identities=10% Similarity=0.100 Sum_probs=56.6
Q ss_pred eEEEEEccCcccCCHHHHHHHHHHHhhC-CCceEEEEcCCcccchhhhccCchhHHHhhcCCceeeeccChHHhhcCCCc
Q 012613 274 SVIYVSFGSVVNIDETEFLEIAWGLANS-RVPFLWVVRPGLVREAEWLELLPTGFVEMLDGRGHIVKWAPQQEVLAHPAV 352 (460)
Q Consensus 274 ~vI~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vp~~~ll~~~~~ 352 (460)
++.+|.+|.++. ..+.++.+. +.+++.++.... +... ..... -+.-+-+..++|..+++
T Consensus 7 ~vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~-----------~~~~-~a~~~-g~~~~~~~~~ll~~~~~ 66 (359)
T 3e18_A 7 QLVIVGYGGMGS-------YHVTLASAADNLEVHGVFDILA-----------EKRE-AAAQK-GLKIYESYEAVLADEKV 66 (359)
T ss_dssp EEEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSSH-----------HHHH-HHHTT-TCCBCSCHHHHHHCTTC
T ss_pred cEEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCCH-----------HHHH-HHHhc-CCceeCCHHHHhcCCCC
Confidence 578888887652 334455554 445544444321 1110 01110 12234466788887666
Q ss_pred cceeeccCch----hHHHhHhcCCceee-ccccc--chhh-hHHHhhhhheeeEecC
Q 012613 353 GGFLTHGGWN----STLESICEGVPMIC-QPYLG--DQMV-NARYISHVWRLGLHLD 401 (460)
Q Consensus 353 ~~~I~HGG~g----s~~eal~~GvP~v~-~P~~~--DQ~~-na~~v~~~~G~G~~l~ 401 (460)
.+++--.-.. .+.+|+.+|+++++ -|+.. ++-. ..+..++ .|+-..+.
T Consensus 67 D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~-~g~~~~v~ 122 (359)
T 3e18_A 67 DAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKR-VNKHFMVH 122 (359)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH-HTCCEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHH-hCCeEEEE
Confidence 6677544433 46788999999888 35543 3433 3334444 35544443
No 473
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=20.54 E-value=1.8e+02 Score=25.00 Aligned_cols=36 Identities=8% Similarity=0.006 Sum_probs=27.5
Q ss_pred ceEEEEcC-----CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPL-----PYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~-----~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+||+|+.. ++. -..=+....+.|.+.|++|+++++.
T Consensus 24 kkV~ill~~~~~~dG~-e~~E~~~p~~vL~~aG~~V~~~S~~ 64 (242)
T 3l3b_A 24 LNSAVILAGCGHMDGS-EIREAVLVMLELDRHNVNFKCFAPN 64 (242)
T ss_dssp CEEEEECCCSSTTTSC-CHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEEEecCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecC
Confidence 57888876 543 4555666778888999999999986
No 474
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=20.53 E-value=1.3e+02 Score=26.33 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=25.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++. -+ -..+|++|+++|++|+++..
T Consensus 28 ~gk~vlVTGas~-gI--G~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 28 AGKVAIVTGAGA-GI--GLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp TTCEEEETTTTS-TH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 356777776663 33 35789999999999988764
No 475
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=20.52 E-value=1.1e+02 Score=26.25 Aligned_cols=34 Identities=15% Similarity=0.046 Sum_probs=24.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++.++++.++. - --..+|++|+++|++|+++.-.
T Consensus 22 ~k~vlITGas~-g--IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 22 SKNILVLGGSG-A--LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 35566665553 2 3468999999999999887754
No 476
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=20.50 E-value=40 Score=32.58 Aligned_cols=63 Identities=16% Similarity=0.076 Sum_probs=33.2
Q ss_pred cccccccCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeEEEEcCC--CCCCC
Q 012613 4 KQESCRLPRNGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTNLNPLNACNYPHFEFHSISA--SLSET 75 (460)
Q Consensus 4 ~~~~~~~~~~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~gi~~~~~~~--~~~~~ 75 (460)
.|-+++. +-+++++--+ |=.-++.+|+.|.+.|+++. +|........+ .|+.+..+.+ ++|+.
T Consensus 16 ~~~~~~~--~i~raLISV~----DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e-~GI~v~~V~kvTgfPEi 80 (534)
T 4ehi_A 16 ENLYFQS--NAMRALLSVS----DKEGIVEFGKELENLGFEIL--STGGTFKLLKE-NGIKVIEVSDFTKSPEL 80 (534)
T ss_dssp GGEEECT--TCCEEEEEES----SCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHH-TTCCCEECBCCC-----
T ss_pred ceeeecc--CCcEEEEEEc----ccccHHHHHHHHHHCCCEEE--EccHHHHHHHH-CCCceeehhhccCCchh
Confidence 3444444 4455555442 44458899999999999965 33322222222 4666666652 44443
No 477
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=20.48 E-value=84 Score=25.98 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=25.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIH 49 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~ 49 (460)
.+.+++..|..|+-.-+..+++.|.++|+.|..+-
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d 56 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPL 56 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 34444555555777778899999999999976643
No 478
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=20.47 E-value=1.3e+02 Score=25.54 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=24.2
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|.++++.++. - --..+|++|+++|++|+++..
T Consensus 4 ~k~~lVTGas~-g--IG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 4 TKSALVTGASR-G--IGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp SCEEEETTCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-h--HHHHHHHHHHHCCCEEEEEeC
Confidence 45666766653 2 346789999999999988655
No 479
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=20.43 E-value=1.3e+02 Score=25.17 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=25.6
Q ss_pred ceEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGH--INPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH--~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
...+++-.|..|+ ..-+..+++.|.++|++|..+--
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 3445555555566 66778899999999999876543
No 480
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=20.33 E-value=53 Score=29.77 Aligned_cols=37 Identities=24% Similarity=0.294 Sum_probs=29.8
Q ss_pred hhcCCCccceeeccCchhHHHhH---hcCCceeecccccc
Q 012613 346 VLAHPAVGGFLTHGGWNSTLESI---CEGVPMICQPYLGD 382 (460)
Q Consensus 346 ll~~~~~~~~I~HGG~gs~~eal---~~GvP~v~~P~~~D 382 (460)
.|..-.+.++|.=||-||..-|. ..|+|+|++|-..|
T Consensus 89 ~l~~~~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiPkTID 128 (320)
T 1pfk_A 89 NLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLPGTID 128 (320)
T ss_dssp HHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEBCTT
T ss_pred HHHHcCCCEEEEECCCchHHHHHHHHhhCCCEEEEecccc
Confidence 56677888999999999876553 47999999997654
No 481
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=20.32 E-value=1e+02 Score=27.19 Aligned_cols=31 Identities=19% Similarity=0.353 Sum_probs=24.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
|+|+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 7899998777664 468889999999977644
No 482
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=20.30 E-value=1.2e+02 Score=27.33 Aligned_cols=35 Identities=11% Similarity=0.071 Sum_probs=25.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
++|+|++.. +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 24 ~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITG--VAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEC--CCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 456776653 335443 57899999999999998763
No 483
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=20.10 E-value=1.2e+02 Score=25.96 Aligned_cols=33 Identities=18% Similarity=0.046 Sum_probs=23.9
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 15 KRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
.|+++++.++. - --..+|++|+++|++|+++..
T Consensus 5 ~k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 5 GQVCVVTGASR-G--IGRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp TCEEEESSTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCc-h--HHHHHHHHHHHCCCEEEEEeC
Confidence 35666766653 2 345789999999999988754
No 484
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=20.06 E-value=93 Score=27.39 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=23.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+++|+++. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIG--ATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 35666554 334443 46789999999999887653
No 485
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=20.04 E-value=1.2e+02 Score=26.83 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=25.9
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~~ 51 (460)
+.|+++++.++.| --..+|++|+++|++|+++.-.
T Consensus 40 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 40 SARSVLVTGGTKG---IGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 3567777776642 3467899999999999987653
No 486
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=20.04 E-value=4.6e+02 Score=23.24 Aligned_cols=60 Identities=13% Similarity=0.152 Sum_probs=35.4
Q ss_pred ccChHHhhcCCCccceeeccC----chhHHHhHhcCCceeec-cccc--chhh-hHHHhhhhheeeEec
Q 012613 340 WAPQQEVLAHPAVGGFLTHGG----WNSTLESICEGVPMICQ-PYLG--DQMV-NARYISHVWRLGLHL 400 (460)
Q Consensus 340 ~vp~~~ll~~~~~~~~I~HGG----~gs~~eal~~GvP~v~~-P~~~--DQ~~-na~~v~~~~G~G~~l 400 (460)
+-...+++..+++.+++---- .-.+.+|+.+|+++++= |+.. ++.. ..+..++ .|+-+.+
T Consensus 56 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~-~~~~~~v 123 (329)
T 3evn_A 56 YDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAES-CNLFLME 123 (329)
T ss_dssp ESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH-TTCCEEE
T ss_pred cCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHH-cCCEEEE
Confidence 445678888666655764333 33467889999998873 6544 3332 3344444 3654444
No 487
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=20.03 E-value=96 Score=26.95 Aligned_cols=34 Identities=15% Similarity=0.093 Sum_probs=27.5
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|+++++.++.| --.++|++|++.|.+|.+...
T Consensus 8 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 8 TGKTALVTGSARG---LGFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 5789999988864 357899999999999887543
No 488
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=20.03 E-value=1.6e+02 Score=25.10 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=22.2
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCe-EEEEeC
Q 012613 13 NGKRVILFPLPYQGHINPMLQIASVLYSKGFS-ITIIHT 50 (460)
Q Consensus 13 ~~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~-V~~~~~ 50 (460)
+++++++ +.++ |- --..+|++|+++|++ |+++..
T Consensus 4 ~~k~vlV-tGas-~g--IG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 4 TNKNVIF-VAAL-GG--IGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp TTCEEEE-ETTT-SH--HHHHHHHHHHHTCCSEEEEEES
T ss_pred CCcEEEE-ECCC-Ch--HHHHHHHHHHHCCCcEEEEEec
Confidence 3445444 4333 43 346899999999997 777654
No 489
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=20.01 E-value=1.4e+02 Score=25.29 Aligned_cols=34 Identities=24% Similarity=0.130 Sum_probs=25.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012613 14 GKRVILFPLPYQGHINPMLQIASVLYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~Il~~~~~~~GH~~p~~~La~~L~~rGh~V~~~~~ 50 (460)
+.|.++++.++.| --..+|++|+++|++|.++..
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeC
Confidence 3567777777653 356899999999999988654
Done!