Query 012626
Match_columns 459
No_of_seqs 482 out of 1294
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 04:37:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012626.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012626hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 2.6E-45 5.6E-50 335.8 41.6 429 4-438 36-472 (485)
2 TIGR00887 2A0109 phosphate:H+ 100.0 3.1E-42 6.8E-47 332.3 34.0 396 25-432 51-500 (502)
3 TIGR01299 synapt_SV2 synaptic 100.0 7.9E-42 1.7E-46 333.3 35.9 402 10-427 182-740 (742)
4 PRK10077 xylE D-xylose transpo 100.0 4E-41 8.7E-46 324.5 39.7 406 21-439 46-476 (479)
5 KOG0254 Predicted transporter 100.0 3.1E-39 6.8E-44 311.3 42.0 408 30-440 89-503 (513)
6 TIGR00898 2A0119 cation transp 100.0 2.6E-39 5.6E-44 313.6 32.8 387 17-429 111-503 (505)
7 PRK10642 proline/glycine betai 100.0 5.9E-39 1.3E-43 308.3 33.3 386 7-426 28-435 (490)
8 TIGR00879 SP MFS transporter, 100.0 5.7E-38 1.2E-42 303.4 39.7 399 27-428 68-478 (481)
9 COG2271 UhpC Sugar phosphate p 100.0 5.9E-40 1.3E-44 286.9 21.9 388 4-419 38-432 (448)
10 COG2814 AraJ Arabinose efflux 100.0 6.6E-38 1.4E-42 278.5 30.5 355 13-422 31-387 (394)
11 TIGR02332 HpaX 4-hydroxyphenyl 100.0 6.9E-38 1.5E-42 294.2 29.3 382 3-409 16-409 (412)
12 PF00083 Sugar_tr: Sugar (and 100.0 1.8E-44 3.8E-49 345.0 -18.7 401 28-434 44-450 (451)
13 PRK12307 putative sialic acid 100.0 1.3E-36 2.9E-41 288.6 32.6 360 6-402 29-389 (426)
14 PRK09556 uhpT sugar phosphate 100.0 9.9E-38 2.1E-42 298.5 24.9 386 3-420 37-448 (467)
15 PRK10406 alpha-ketoglutarate t 100.0 2.9E-36 6.4E-41 285.6 32.6 370 4-420 31-423 (432)
16 PRK11551 putative 3-hydroxyphe 100.0 2.5E-36 5.5E-41 284.8 29.5 365 7-418 27-393 (406)
17 TIGR00891 2A0112 putative sial 100.0 7.2E-36 1.6E-40 282.2 32.1 376 4-403 21-398 (405)
18 PRK11663 regulatory protein Uh 100.0 4E-36 8.7E-41 284.6 30.0 380 6-416 34-419 (434)
19 PRK09952 shikimate transporter 100.0 1.7E-35 3.6E-40 280.4 32.8 378 4-423 31-435 (438)
20 TIGR00903 2A0129 major facilit 100.0 4.1E-36 8.9E-41 276.1 27.4 324 17-395 13-341 (368)
21 PRK03545 putative arabinose tr 100.0 1.3E-35 2.9E-40 277.9 31.2 347 16-419 30-378 (390)
22 PRK09705 cynX putative cyanate 100.0 2.3E-35 4.9E-40 275.8 29.6 356 14-427 28-388 (393)
23 KOG0253 Synaptic vesicle trans 100.0 2.1E-35 4.5E-40 251.8 25.8 396 13-428 96-527 (528)
24 TIGR00893 2A0114 d-galactonate 100.0 1.1E-35 2.4E-40 280.2 26.7 388 4-416 3-394 (399)
25 PRK03893 putative sialic acid 100.0 5.1E-35 1.1E-39 283.3 31.6 386 6-405 31-437 (496)
26 PRK15075 citrate-proton sympor 100.0 7.9E-35 1.7E-39 276.0 31.4 352 4-399 24-397 (434)
27 TIGR00890 2A0111 Oxalate/Forma 100.0 5.6E-35 1.2E-39 273.4 29.1 356 11-414 19-375 (377)
28 PRK11273 glpT sn-glycerol-3-ph 100.0 6.5E-34 1.4E-38 271.0 33.2 379 15-429 49-443 (452)
29 TIGR00894 2A0114euk Na(+)-depe 100.0 5.5E-34 1.2E-38 273.2 30.1 388 4-422 28-451 (465)
30 PRK10091 MFS transport protein 100.0 7E-34 1.5E-38 265.2 29.8 348 15-418 23-373 (382)
31 PRK14995 methyl viologen resis 100.0 3.8E-34 8.1E-39 275.3 28.6 374 4-396 15-413 (495)
32 PRK05122 major facilitator sup 100.0 1E-33 2.2E-38 266.4 30.0 351 14-425 35-393 (399)
33 KOG0255 Synaptic vesicle trans 100.0 1.3E-32 2.8E-37 267.2 36.9 391 22-436 110-508 (521)
34 PRK10213 nepI ribonucleoside t 100.0 4.4E-33 9.4E-38 260.1 31.2 337 17-410 42-380 (394)
35 PLN00028 nitrate transmembrane 100.0 1.3E-33 2.8E-38 269.7 27.0 367 13-421 54-433 (476)
36 TIGR00895 2A0115 benzoate tran 100.0 4E-33 8.7E-38 262.8 29.3 363 12-393 34-397 (398)
37 PRK12382 putative transporter; 100.0 1.5E-32 3.3E-37 257.7 31.7 343 15-418 36-386 (392)
38 TIGR00881 2A0104 phosphoglycer 100.0 5E-34 1.1E-38 267.1 21.6 372 3-401 3-377 (379)
39 KOG2532 Permease of the major 100.0 4.6E-33 1E-37 258.9 26.3 365 22-420 65-446 (466)
40 TIGR00892 2A0113 monocarboxyla 100.0 9.2E-34 2E-38 269.4 22.0 373 14-415 38-415 (455)
41 PRK03699 putative transporter; 100.0 1E-32 2.2E-37 258.5 28.7 355 12-421 24-380 (394)
42 TIGR00899 2A0120 sugar efflux 100.0 3E-32 6.5E-37 254.6 31.8 356 11-421 14-374 (375)
43 KOG0252 Inorganic phosphate tr 100.0 3.1E-34 6.8E-39 252.3 15.2 394 26-434 80-511 (538)
44 PRK10489 enterobactin exporter 100.0 3.8E-33 8.3E-38 263.7 23.1 362 19-430 41-409 (417)
45 PRK15034 nitrate/nitrite trans 100.0 5.9E-32 1.3E-36 249.6 30.2 364 4-418 43-452 (462)
46 TIGR00711 efflux_EmrB drug res 100.0 3.6E-32 7.8E-37 262.9 29.8 373 7-397 14-411 (485)
47 TIGR00900 2A0121 H+ Antiporter 100.0 2.6E-32 5.5E-37 254.2 27.8 332 21-398 25-365 (365)
48 PRK10504 putative transporter; 100.0 4.6E-32 1E-36 260.6 29.9 368 11-399 26-418 (471)
49 TIGR00883 2A0106 metabolite-pr 100.0 1.1E-31 2.3E-36 252.7 30.8 342 27-411 27-391 (394)
50 PRK15402 multidrug efflux syst 100.0 7.8E-32 1.7E-36 254.0 29.1 356 11-413 30-387 (406)
51 KOG1330 Sugar transporter/spin 100.0 6.8E-34 1.5E-38 251.4 14.0 353 5-397 43-413 (493)
52 PRK03633 putative MFS family t 100.0 4.3E-31 9.3E-36 246.5 33.3 341 17-418 28-369 (381)
53 TIGR00712 glpT glycerol-3-phos 100.0 5.3E-32 1.1E-36 257.0 26.9 380 17-424 49-437 (438)
54 TIGR00710 efflux_Bcr_CflA drug 100.0 1.5E-31 3.3E-36 250.8 29.1 337 16-399 26-364 (385)
55 COG2223 NarK Nitrate/nitrite t 100.0 9.6E-32 2.1E-36 236.1 24.4 368 4-420 23-400 (417)
56 PF07690 MFS_1: Major Facilita 100.0 2E-32 4.3E-37 253.6 20.8 328 20-387 22-352 (352)
57 cd06174 MFS The Major Facilita 100.0 7.7E-31 1.7E-35 242.9 31.3 329 16-419 20-350 (352)
58 PRK11043 putative transporter; 100.0 7.7E-31 1.7E-35 246.9 29.0 331 19-399 30-360 (401)
59 TIGR00897 2A0118 polyol permea 100.0 9.7E-31 2.1E-35 245.7 29.1 351 23-418 41-398 (402)
60 PRK15403 multidrug efflux syst 100.0 1.1E-30 2.3E-35 245.4 29.2 341 13-399 34-376 (413)
61 PRK11646 multidrug resistance 100.0 5.4E-31 1.2E-35 246.6 26.6 348 14-416 30-383 (400)
62 PRK10473 multidrug efflux syst 100.0 7.1E-31 1.5E-35 246.4 27.5 328 17-401 25-354 (392)
63 PRK15011 sugar efflux transpor 100.0 3.4E-30 7.3E-35 241.3 31.9 354 12-422 33-392 (393)
64 PRK11102 bicyclomycin/multidru 100.0 1.1E-30 2.4E-35 244.0 28.0 325 19-389 15-342 (377)
65 PRK11195 lysophospholipid tran 100.0 2.4E-30 5.3E-35 241.6 29.4 347 21-418 29-377 (393)
66 KOG2533 Permease of the major 100.0 2.1E-31 4.5E-36 248.2 22.0 269 18-303 69-349 (495)
67 PRK09874 drug efflux system pr 100.0 3.4E-30 7.3E-35 243.5 29.7 346 21-418 40-395 (408)
68 PRK10054 putative transporter; 100.0 1.8E-30 4E-35 242.6 25.2 351 12-416 25-379 (395)
69 PRK10133 L-fucose transporter; 100.0 4.3E-30 9.3E-35 242.5 26.8 352 11-413 42-425 (438)
70 PRK11010 ampG muropeptide tran 100.0 9.9E-30 2.2E-34 243.3 28.9 360 17-423 34-405 (491)
71 TIGR00896 CynX cyanate transpo 100.0 1.2E-29 2.6E-34 234.7 27.4 328 16-398 21-350 (355)
72 TIGR00886 2A0108 nitrite extru 100.0 5.5E-30 1.2E-34 238.5 23.9 343 4-382 10-365 (366)
73 TIGR00885 fucP L-fucose:H+ sym 100.0 2.6E-29 5.6E-34 235.1 27.3 346 13-412 21-403 (410)
74 TIGR00902 2A0127 phenyl propri 100.0 6E-29 1.3E-33 231.9 28.3 340 21-416 30-374 (382)
75 PRK11652 emrD multidrug resist 100.0 7.8E-29 1.7E-33 232.7 27.7 329 18-397 31-361 (394)
76 TIGR00889 2A0110 nucleoside tr 100.0 2.1E-28 4.5E-33 230.0 27.4 363 11-425 19-407 (418)
77 PRK09528 lacY galactoside perm 100.0 4.6E-28 1E-32 229.2 26.8 356 13-416 29-398 (420)
78 PRK11128 putative 3-phenylprop 100.0 1.4E-27 3E-32 222.8 29.5 337 22-414 31-372 (382)
79 PRK11902 ampG muropeptide tran 100.0 1.1E-27 2.4E-32 225.1 28.6 359 10-418 14-387 (402)
80 TIGR00792 gph sugar (Glycoside 100.0 2.8E-27 6E-32 225.6 25.0 336 17-399 22-383 (437)
81 KOG2504 Monocarboxylate transp 100.0 1E-28 2.2E-33 232.9 14.3 380 18-421 69-476 (509)
82 PRK08633 2-acyl-glycerophospho 100.0 5.9E-27 1.3E-31 249.3 29.4 349 5-395 20-383 (1146)
83 KOG3764 Vesicular amine transp 100.0 1.7E-28 3.7E-33 212.5 13.8 341 22-412 98-445 (464)
84 TIGR00882 2A0105 oligosacchari 100.0 1.5E-26 3.3E-31 217.1 27.7 353 14-414 22-388 (396)
85 PRK06814 acylglycerophosphoeth 100.0 7.7E-27 1.7E-31 247.3 27.6 334 30-396 52-396 (1140)
86 TIGR00805 oat sodium-independe 100.0 2.3E-27 4.9E-32 231.9 21.1 382 4-397 42-582 (633)
87 TIGR00901 2A0125 AmpG-related 100.0 7.7E-27 1.7E-31 216.2 23.3 325 19-380 12-355 (356)
88 PF05977 MFS_3: Transmembrane 100.0 2.3E-26 5E-31 218.1 26.8 347 25-419 40-392 (524)
89 TIGR00806 rfc RFC reduced fola 100.0 3.9E-27 8.3E-32 213.1 18.6 365 4-390 37-409 (511)
90 KOG2615 Permease of the major 99.9 1.1E-26 2.4E-31 200.1 18.2 340 25-396 63-414 (451)
91 PF06609 TRI12: Fungal trichot 99.9 3.7E-25 8.1E-30 208.7 28.4 369 7-394 56-465 (599)
92 COG0738 FucP Fucose permease [ 99.9 1.5E-25 3.2E-30 195.9 23.6 340 12-404 30-392 (422)
93 TIGR00924 yjdL_sub1_fam amino 99.9 9.2E-25 2E-29 208.1 29.1 375 25-411 43-458 (475)
94 COG2807 CynX Cyanate permease 99.9 1.2E-24 2.6E-29 187.3 26.1 341 16-412 33-376 (395)
95 PRK10207 dipeptide/tripeptide 99.9 8.6E-25 1.9E-29 208.2 25.7 363 20-393 40-438 (489)
96 TIGR02718 sider_RhtX_FptX side 99.9 5.3E-24 1.2E-28 199.5 29.4 350 21-416 27-386 (390)
97 PTZ00207 hypothetical protein; 99.9 9.1E-24 2E-28 200.8 27.9 357 16-396 48-514 (591)
98 PRK10429 melibiose:sodium symp 99.9 5.7E-23 1.2E-27 196.7 25.1 337 22-399 34-396 (473)
99 PF03825 Nuc_H_symport: Nucleo 99.9 2.9E-22 6.3E-27 184.9 27.9 327 25-399 32-367 (400)
100 PRK09584 tppB putative tripept 99.9 1.7E-22 3.6E-27 193.7 22.2 359 19-391 46-439 (500)
101 PRK09669 putative symporter Ya 99.9 7.7E-22 1.7E-26 187.9 26.3 331 21-399 36-391 (444)
102 PF11700 ATG22: Vacuole efflux 99.9 1.2E-20 2.6E-25 177.4 31.6 364 30-426 70-473 (477)
103 TIGR01301 GPH_sucrose GPH fami 99.9 6E-21 1.3E-25 178.1 28.9 379 23-424 32-475 (477)
104 TIGR00788 fbt folate/biopterin 99.9 1.8E-22 3.8E-27 191.9 17.1 392 7-422 38-447 (468)
105 KOG4686 Predicted sugar transp 99.9 5.7E-23 1.2E-27 169.9 10.5 363 15-423 64-445 (459)
106 PRK11462 putative transporter; 99.9 5.1E-20 1.1E-24 175.0 30.9 327 23-399 38-390 (460)
107 PRK09848 glucuronide transport 99.9 6.5E-21 1.4E-25 181.9 24.6 331 20-399 34-391 (448)
108 COG2211 MelB Na+/melibiose sym 99.9 4.2E-20 9.2E-25 168.5 28.2 330 22-399 40-399 (467)
109 PF13347 MFS_2: MFS/sugar tran 99.9 2.1E-20 4.5E-25 177.2 24.9 332 21-399 28-387 (428)
110 PRK15462 dipeptide/tripeptide 99.9 3.2E-19 6.9E-24 167.3 30.0 362 22-393 37-437 (493)
111 TIGR01272 gluP glucose/galacto 99.9 1.5E-19 3.3E-24 162.3 25.0 280 78-409 5-303 (310)
112 PF01306 LacY_symp: LacY proto 99.8 1.9E-20 4.1E-25 169.3 15.4 356 21-424 34-404 (412)
113 COG2270 Permeases of the major 99.8 1.6E-18 3.5E-23 153.2 25.7 356 28-426 56-434 (438)
114 KOG2563 Permease of the major 99.8 3.9E-18 8.4E-23 151.5 20.2 363 23-426 73-455 (480)
115 COG3104 PTR2 Dipeptide/tripept 99.8 9.5E-17 2.1E-21 145.4 22.2 360 24-391 55-451 (498)
116 PF03209 PUCC: PUCC protein; 99.7 2.4E-15 5.1E-20 133.8 27.1 350 22-416 7-393 (403)
117 KOG2325 Predicted transporter/ 99.7 3.1E-17 6.7E-22 150.2 13.8 377 12-418 52-472 (488)
118 KOG3626 Organic anion transpor 99.7 1.6E-16 3.4E-21 151.6 17.7 380 4-396 107-649 (735)
119 PRK10642 proline/glycine betai 99.7 1.1E-16 2.5E-21 154.2 12.6 174 21-196 277-459 (490)
120 PF03137 OATP: Organic Anion T 99.7 3.8E-18 8.2E-23 162.9 -0.1 379 10-397 18-515 (539)
121 KOG2816 Predicted transporter 99.7 1.8E-15 4E-20 140.8 17.3 318 38-396 70-392 (463)
122 TIGR00880 2_A_01_02 Multidrug 99.6 1E-15 2.2E-20 121.4 10.2 137 35-173 3-140 (141)
123 PF03092 BT1: BT1 family; Int 99.6 1.7E-14 3.8E-19 135.5 13.6 382 16-424 11-416 (433)
124 TIGR00895 2A0115 benzoate tran 99.5 1.1E-13 2.4E-18 130.4 14.3 175 235-423 20-195 (398)
125 PF01770 Folate_carrier: Reduc 99.5 1.4E-12 3E-17 117.8 19.9 353 17-383 26-389 (412)
126 PF05631 DUF791: Protein of un 99.5 1.4E-12 3E-17 114.5 18.6 237 23-294 62-305 (354)
127 COG2271 UhpC Sugar phosphate p 99.5 8.2E-14 1.8E-18 123.5 10.4 182 230-425 27-211 (448)
128 TIGR00891 2A0112 putative sial 99.5 8.5E-13 1.8E-17 124.7 18.1 179 232-424 12-192 (405)
129 TIGR02332 HpaX 4-hydroxyphenyl 99.5 1.6E-12 3.4E-17 122.6 19.3 180 232-425 8-194 (412)
130 PRK11663 regulatory protein Uh 99.5 5.5E-13 1.2E-17 126.7 15.3 176 234-423 25-201 (434)
131 TIGR00893 2A0114 d-galactonate 99.5 7E-13 1.5E-17 124.8 15.7 162 249-424 11-173 (399)
132 PRK15011 sugar efflux transpor 99.5 4.6E-13 1E-17 125.6 14.1 150 21-173 243-392 (393)
133 PRK09528 lacY galactoside perm 99.5 2.2E-13 4.9E-18 129.1 11.2 148 26-175 258-407 (420)
134 TIGR01299 synapt_SV2 synaptic 99.5 2.1E-12 4.6E-17 127.6 18.1 161 249-423 184-357 (742)
135 PRK10054 putative transporter; 99.5 2.5E-12 5.3E-17 120.6 17.5 164 236-414 11-175 (395)
136 TIGR00889 2A0110 nucleoside tr 99.5 4.2E-13 9.1E-18 126.5 12.2 148 28-175 249-406 (418)
137 cd06174 MFS The Major Facilita 99.5 5.4E-13 1.2E-17 123.4 12.6 147 23-171 204-351 (352)
138 PRK15462 dipeptide/tripeptide 99.4 5.6E-12 1.2E-16 118.8 17.1 172 234-418 11-186 (493)
139 TIGR00710 efflux_Bcr_CflA drug 99.4 3.3E-12 7.2E-17 119.8 15.1 165 246-424 19-184 (385)
140 TIGR00881 2A0104 phosphoglycer 99.4 1.6E-12 3.5E-17 121.6 12.1 164 247-424 10-175 (379)
141 PRK03545 putative arabinose tr 99.4 8.8E-12 1.9E-16 117.0 16.9 159 251-423 28-187 (390)
142 TIGR00900 2A0121 H+ Antiporter 99.4 3E-12 6.6E-17 119.1 13.6 161 247-416 14-174 (365)
143 PRK05122 major facilitator sup 99.4 2.1E-12 4.6E-17 121.7 12.5 142 31-174 250-391 (399)
144 PRK12307 putative sialic acid 99.4 9.3E-12 2E-16 118.5 17.0 163 235-411 21-183 (426)
145 TIGR00899 2A0120 sugar efflux 99.4 3.1E-12 6.7E-17 119.6 13.4 150 21-173 226-375 (375)
146 PRK10213 nepI ribonucleoside t 99.4 1.6E-11 3.5E-16 115.0 18.0 149 250-412 38-186 (394)
147 TIGR00890 2A0111 Oxalate/Forma 99.4 1.9E-12 4.2E-17 121.0 11.7 141 23-165 233-375 (377)
148 COG2814 AraJ Arabinose efflux 99.4 1.8E-11 3.9E-16 110.1 17.0 175 233-421 14-189 (394)
149 PRK03699 putative transporter; 99.4 1.4E-11 3.1E-16 115.7 17.0 172 229-414 4-176 (394)
150 PRK10489 enterobactin exporter 99.4 1.1E-11 2.4E-16 117.5 16.1 168 247-423 32-199 (417)
151 PRK10504 putative transporter; 99.4 1.9E-11 4.1E-16 117.9 17.4 164 234-411 12-175 (471)
152 PRK11551 putative 3-hydroxyphe 99.4 1E-11 2.3E-16 117.3 15.2 170 240-423 23-193 (406)
153 PRK03893 putative sialic acid 99.4 1.6E-11 3.4E-16 119.3 16.7 176 233-422 21-196 (496)
154 TIGR00892 2A0113 monocarboxyla 99.4 3.6E-12 7.7E-17 121.7 11.9 141 24-166 270-415 (455)
155 PRK10473 multidrug efflux syst 99.4 1.6E-11 3.4E-16 115.5 15.5 174 237-424 8-182 (392)
156 TIGR00924 yjdL_sub1_fam amino 99.4 1.8E-11 3.9E-16 117.1 15.9 171 234-418 12-189 (475)
157 PRK12382 putative transporter; 99.3 1E-11 2.2E-16 116.7 13.2 137 32-170 251-387 (392)
158 PF07690 MFS_1: Major Facilita 99.3 1.1E-11 2.3E-16 114.8 12.9 155 247-415 11-166 (352)
159 PRK14995 methyl viologen resis 99.3 4.5E-11 9.7E-16 115.6 17.3 177 233-423 7-185 (495)
160 TIGR00712 glpT glycerol-3-phos 99.3 1.3E-11 2.9E-16 117.5 13.4 179 234-423 29-209 (438)
161 PRK10091 MFS transport protein 99.3 4.2E-11 9E-16 112.0 16.4 175 235-423 6-181 (382)
162 PLN00028 nitrate transmembrane 99.3 8.5E-11 1.8E-15 112.9 18.4 155 247-416 51-214 (476)
163 TIGR00711 efflux_EmrB drug res 99.3 2.1E-11 4.5E-16 118.2 13.9 174 236-423 6-180 (485)
164 PRK09556 uhpT sugar phosphate 99.3 1.6E-11 3.4E-16 118.0 12.4 149 20-170 284-447 (467)
165 TIGR00887 2A0109 phosphate:H+ 99.3 1.5E-10 3.3E-15 112.2 19.2 152 265-424 54-228 (502)
166 TIGR00903 2A0129 major facilit 99.3 5.8E-11 1.3E-15 109.7 15.5 162 248-424 7-169 (368)
167 PRK11652 emrD multidrug resist 99.3 1E-10 2.2E-15 110.1 17.2 162 249-424 25-187 (394)
168 PRK11273 glpT sn-glycerol-3-ph 99.3 4.9E-11 1.1E-15 114.1 15.1 162 251-423 48-211 (452)
169 PRK15403 multidrug efflux syst 99.3 7.8E-11 1.7E-15 111.1 16.2 157 254-424 38-195 (413)
170 PRK09874 drug efflux system pr 99.3 1.4E-10 3.1E-15 109.7 18.0 168 241-423 23-196 (408)
171 PRK11646 multidrug resistance 99.3 1.4E-10 3.1E-15 108.9 17.8 161 247-422 25-187 (400)
172 PRK10207 dipeptide/tripeptide 99.3 1.1E-10 2.4E-15 111.8 17.0 172 235-419 17-192 (489)
173 KOG3098 Uncharacterized conser 99.3 9.4E-10 2E-14 101.4 22.0 102 36-138 56-157 (461)
174 TIGR00879 SP MFS transporter, 99.3 1.3E-11 2.9E-16 119.3 10.7 148 265-423 69-219 (481)
175 TIGR00902 2A0127 phenyl propri 99.3 4.5E-11 9.7E-16 111.8 13.7 142 24-169 234-376 (382)
176 PRK15402 multidrug efflux syst 99.3 1.4E-10 3E-15 109.6 17.2 164 247-424 28-192 (406)
177 TIGR00886 2A0108 nitrite extru 99.3 1.5E-10 3.2E-15 107.8 17.0 145 237-395 6-151 (366)
178 PRK11195 lysophospholipid tran 99.3 1.7E-10 3.6E-15 108.2 17.2 156 250-423 21-176 (393)
179 PRK11043 putative transporter; 99.3 2.2E-10 4.8E-15 108.0 18.1 154 255-422 29-182 (401)
180 PRK03633 putative MFS family t 99.3 1.9E-10 4E-15 107.7 16.8 150 234-397 8-157 (381)
181 TIGR00894 2A0114euk Na(+)-depe 99.3 3.3E-11 7.2E-16 115.9 11.9 145 261-417 70-215 (465)
182 PRK10077 xylE D-xylose transpo 99.3 3E-10 6.5E-15 109.9 18.6 160 263-424 51-218 (479)
183 TIGR00897 2A0118 polyol permea 99.3 1.2E-10 2.7E-15 109.6 15.5 143 247-399 28-171 (402)
184 TIGR00806 rfc RFC reduced fola 99.3 3.8E-10 8.2E-15 103.6 17.5 160 249-424 43-206 (511)
185 PRK09952 shikimate transporter 99.2 1.1E-10 2.5E-15 111.0 14.3 154 22-175 278-436 (438)
186 PRK11102 bicyclomycin/multidru 99.2 1.8E-10 3.9E-15 107.7 14.7 160 250-423 9-169 (377)
187 TIGR00885 fucP L-fucose:H+ sym 99.2 3.7E-10 8.1E-15 106.1 16.6 137 247-394 18-154 (410)
188 PRK11010 ampG muropeptide tran 99.2 4.5E-10 9.8E-15 108.1 17.1 152 21-174 249-405 (491)
189 PRK15034 nitrate/nitrite trans 99.2 7.1E-10 1.5E-14 103.6 17.5 151 233-393 35-186 (462)
190 PRK09584 tppB putative tripept 99.2 6.3E-10 1.4E-14 107.2 16.8 166 235-413 24-193 (500)
191 COG2223 NarK Nitrate/nitrite t 99.2 3.8E-10 8.3E-15 100.7 13.6 177 233-422 15-195 (417)
192 PRK09705 cynX putative cyanate 99.2 7.1E-10 1.5E-14 104.0 16.2 141 249-404 26-167 (393)
193 TIGR00883 2A0106 metabolite-pr 99.2 7.2E-11 1.6E-15 111.1 9.1 140 21-162 246-391 (394)
194 PRK11902 ampG muropeptide tran 99.2 8.2E-10 1.8E-14 104.1 15.2 170 241-423 8-184 (402)
195 PF06963 FPN1: Ferroportin1 (F 99.2 8.1E-08 1.8E-12 88.9 27.3 342 33-387 41-409 (432)
196 PF11700 ATG22: Vacuole efflux 99.1 5.4E-10 1.2E-14 105.8 13.3 154 19-174 306-470 (477)
197 PF05977 MFS_3: Transmembrane 99.1 3.3E-10 7.1E-15 108.4 11.9 146 21-168 245-390 (524)
198 KOG3762 Predicted transporter 99.1 2.3E-10 4.9E-15 104.6 10.1 152 249-414 388-540 (618)
199 PRK11128 putative 3-phenylprop 99.1 7.5E-10 1.6E-14 103.6 13.5 141 24-168 234-375 (382)
200 KOG1330 Sugar transporter/spin 99.1 5.9E-11 1.3E-15 106.7 5.4 177 237-427 38-216 (493)
201 TIGR00805 oat sodium-independe 99.1 6.2E-10 1.3E-14 109.8 12.8 156 240-396 41-234 (633)
202 PRK10406 alpha-ketoglutarate t 99.1 4E-09 8.7E-14 100.4 17.8 178 239-422 29-220 (432)
203 TIGR00898 2A0119 cation transp 99.1 4E-10 8.7E-15 109.7 10.7 153 254-423 111-266 (505)
204 PRK15075 citrate-proton sympor 99.1 2.1E-09 4.6E-14 102.3 15.4 168 234-407 17-198 (434)
205 KOG2615 Permease of the major 99.1 6.2E-10 1.3E-14 97.5 10.4 116 265-395 66-181 (451)
206 PRK10133 L-fucose transporter; 99.1 6.2E-09 1.3E-13 98.8 17.9 146 238-394 32-177 (438)
207 PF06813 Nodulin-like: Nodulin 99.1 1E-09 2.2E-14 93.5 11.0 155 17-175 24-185 (250)
208 TIGR00882 2A0105 oligosacchari 99.1 1.1E-09 2.4E-14 103.0 12.1 141 26-168 250-391 (396)
209 TIGR00901 2A0125 AmpG-related 99.1 2.8E-09 6.1E-14 98.8 14.3 162 249-423 5-181 (356)
210 TIGR00926 2A1704 Peptide:H+ sy 99.1 6.6E-08 1.4E-12 94.9 24.2 146 24-169 17-179 (654)
211 TIGR00880 2_A_01_02 Multidrug 99.1 8.8E-10 1.9E-14 87.0 9.4 134 274-421 5-139 (141)
212 TIGR00792 gph sugar (Glycoside 99.1 2.9E-09 6.3E-14 101.7 14.6 113 28-140 255-375 (437)
213 PRK06814 acylglycerophosphoeth 99.1 5.4E-09 1.2E-13 111.9 17.9 190 223-423 6-197 (1140)
214 PTZ00207 hypothetical protein; 99.0 5.8E-09 1.2E-13 100.4 15.3 163 248-421 43-206 (591)
215 TIGR02718 sider_RhtX_FptX side 99.0 3.3E-09 7.2E-14 99.6 13.0 143 23-167 236-386 (390)
216 COG2270 Permeases of the major 99.0 2.2E-09 4.8E-14 95.9 10.2 152 22-174 280-431 (438)
217 TIGR00896 CynX cyanate transpo 99.0 6.1E-09 1.3E-13 96.5 13.8 143 249-407 17-161 (355)
218 TIGR01301 GPH_sucrose GPH fami 99.0 2.7E-08 5.9E-13 93.8 17.7 178 246-424 18-222 (477)
219 PRK08633 2-acyl-glycerophospho 99.0 4E-09 8.7E-14 113.2 12.4 142 21-163 259-401 (1146)
220 KOG2532 Permease of the major 98.9 2.9E-08 6.4E-13 93.5 14.8 147 261-419 67-214 (466)
221 KOG3810 Micronutrient transpor 98.9 1.9E-08 4.2E-13 87.0 12.1 343 23-387 34-379 (433)
222 TIGR00769 AAA ADP/ATP carrier 98.9 8.8E-06 1.9E-10 76.5 30.6 123 19-141 27-187 (472)
223 KOG0569 Permease of the major 98.9 2.2E-08 4.7E-13 93.4 13.2 145 270-425 63-209 (485)
224 PF02487 CLN3: CLN3 protein; 98.9 2E-07 4.4E-12 84.7 18.0 136 32-173 61-197 (402)
225 PRK09848 glucuronide transport 98.9 4.9E-08 1.1E-12 93.4 15.0 119 21-139 255-382 (448)
226 KOG3764 Vesicular amine transp 98.9 3.6E-09 7.8E-14 93.4 6.5 149 262-424 101-251 (464)
227 PF01306 LacY_symp: LacY proto 98.9 1.2E-08 2.7E-13 93.1 10.1 147 26-174 255-403 (412)
228 PF06813 Nodulin-like: Nodulin 98.9 5.2E-08 1.1E-12 83.2 12.9 169 244-421 14-182 (250)
229 KOG2504 Monocarboxylate transp 98.9 1.1E-08 2.4E-13 97.5 9.6 149 22-172 325-476 (509)
230 COG0477 ProP Permeases of the 98.9 2.4E-08 5.2E-13 90.6 11.6 135 30-164 39-177 (338)
231 PF06609 TRI12: Fungal trichot 98.8 2E-08 4.4E-13 96.1 11.0 141 253-409 65-205 (599)
232 TIGR01272 gluP glucose/galacto 98.8 3.7E-08 8.1E-13 88.8 11.5 131 24-159 172-302 (310)
233 COG3104 PTR2 Dipeptide/tripept 98.8 5.7E-08 1.2E-12 89.1 11.6 177 234-422 23-207 (498)
234 KOG4332 Predicted sugar transp 98.8 3.1E-08 6.7E-13 82.6 8.7 313 24-380 66-390 (454)
235 COG0738 FucP Fucose permease [ 98.8 3.8E-07 8.2E-12 81.4 15.4 136 249-395 30-165 (422)
236 KOG0255 Synaptic vesicle trans 98.8 3.9E-08 8.5E-13 96.0 10.1 146 261-423 112-257 (521)
237 TIGR00788 fbt folate/biopterin 98.7 5.6E-08 1.2E-12 93.0 9.0 151 23-173 281-447 (468)
238 PRK10429 melibiose:sodium symp 98.7 3.5E-07 7.6E-12 88.1 13.9 112 28-139 264-387 (473)
239 KOG0254 Predicted transporter 98.7 4.5E-07 9.8E-12 88.2 14.7 140 269-423 91-232 (513)
240 KOG2533 Permease of the major 98.7 3.9E-07 8.5E-12 86.2 13.4 151 261-425 75-232 (495)
241 KOG0253 Synaptic vesicle trans 98.6 4.5E-08 9.8E-13 85.7 5.9 130 40-173 391-520 (528)
242 PF03825 Nuc_H_symport: Nucleo 98.6 6.3E-07 1.4E-11 83.4 13.6 146 27-174 240-398 (400)
243 PRK09669 putative symporter Ya 98.6 1.2E-06 2.6E-11 83.8 15.4 110 30-139 264-382 (444)
244 PF13347 MFS_2: MFS/sugar tran 98.6 5.9E-07 1.3E-11 85.4 11.8 110 30-139 260-378 (428)
245 KOG4686 Predicted sugar transp 98.6 4.9E-07 1.1E-11 76.4 9.3 149 21-171 291-442 (459)
246 PF00083 Sugar_tr: Sugar (and 98.5 8.3E-10 1.8E-14 105.9 -8.3 145 268-423 47-194 (451)
247 KOG0637 Sucrose transporter an 98.5 4.3E-07 9.3E-12 82.1 9.2 118 22-139 59-199 (498)
248 KOG0252 Inorganic phosphate tr 98.5 1.1E-06 2.4E-11 79.5 11.3 155 264-426 81-251 (538)
249 KOG3574 Acetyl-CoA transporter 98.5 4.4E-06 9.5E-11 73.7 14.6 337 23-397 58-432 (510)
250 PF05978 UNC-93: Ion channel r 98.5 2.8E-06 6E-11 66.9 11.6 116 26-142 33-148 (156)
251 KOG2325 Predicted transporter/ 98.5 6.1E-07 1.3E-11 83.3 8.8 155 262-426 66-235 (488)
252 PRK11462 putative transporter; 98.5 8.5E-06 1.8E-10 78.1 16.8 144 246-397 23-173 (460)
253 PF06779 DUF1228: Protein of u 98.4 5.5E-07 1.2E-11 61.9 5.1 76 12-87 9-84 (85)
254 KOG3762 Predicted transporter 98.4 4.4E-07 9.5E-12 83.7 5.7 145 24-170 400-545 (618)
255 KOG1237 H+/oligopeptide sympor 98.3 5E-05 1.1E-09 73.5 18.6 147 21-169 64-242 (571)
256 PF00854 PTR2: POT family; In 98.3 1.2E-05 2.6E-10 74.8 13.8 108 61-170 2-121 (372)
257 PF05631 DUF791: Protein of un 98.3 3.3E-05 7.2E-10 68.6 15.3 155 258-426 60-222 (354)
258 COG2211 MelB Na+/melibiose sym 98.3 1.7E-05 3.7E-10 73.7 13.4 115 24-138 266-389 (467)
259 PF13000 Acatn: Acetyl-coenzym 98.3 0.00014 3E-09 67.3 18.7 42 356-397 427-468 (544)
260 COG2807 CynX Cyanate permease 98.3 2E-05 4.4E-10 69.6 12.8 144 24-170 237-383 (395)
261 TIGR00939 2a57 Equilibrative N 98.2 0.00035 7.7E-09 65.8 21.3 90 82-176 105-200 (437)
262 KOG2816 Predicted transporter 98.2 5.8E-05 1.3E-09 71.2 14.7 136 276-428 71-207 (463)
263 PF03209 PUCC: PUCC protein; 98.2 7.5E-05 1.6E-09 67.6 14.5 152 17-168 231-394 (403)
264 PF12832 MFS_1_like: MFS_1 lik 98.1 3.5E-05 7.5E-10 52.7 8.1 64 242-305 10-73 (77)
265 PF03219 TLC: TLC ATP/ADP tran 98.0 0.013 2.9E-07 55.8 29.7 254 28-309 56-361 (491)
266 TIGR00926 2A1704 Peptide:H+ sy 98.0 0.00044 9.5E-09 68.5 16.6 158 255-418 11-179 (654)
267 PF07672 MFS_Mycoplasma: Mycop 97.9 0.0004 8.7E-09 58.7 12.7 57 115-171 2-61 (267)
268 PF03137 OATP: Organic Anion T 97.8 4.3E-06 9.3E-11 80.8 -0.9 154 241-394 12-201 (539)
269 PF12832 MFS_1_like: MFS_1 lik 97.8 7.3E-05 1.6E-09 51.1 5.4 48 23-70 28-75 (77)
270 COG3202 ATP/ADP translocase [E 97.7 0.044 9.4E-07 51.2 24.8 266 21-313 49-368 (509)
271 KOG2563 Permease of the major 97.6 0.0014 3E-08 60.1 12.3 127 262-397 75-203 (480)
272 KOG3626 Organic anion transpor 97.5 0.00096 2.1E-08 65.4 11.7 196 233-428 98-350 (735)
273 PF01770 Folate_carrier: Reduc 97.5 0.0042 9.1E-08 57.2 15.1 157 253-424 25-185 (412)
274 PF05978 UNC-93: Ion channel r 97.5 0.012 2.5E-07 46.6 15.2 114 266-394 36-149 (156)
275 PF03092 BT1: BT1 family; Int 97.5 0.001 2.2E-08 63.1 10.9 157 255-422 13-177 (433)
276 TIGR00769 AAA ADP/ATP carrier 97.4 0.011 2.3E-07 56.1 16.7 128 267-395 43-190 (472)
277 KOG1479 Nucleoside transporter 97.3 0.03 6.6E-07 51.2 17.0 91 82-177 116-209 (406)
278 PF06963 FPN1: Ferroportin1 (F 97.0 0.041 8.9E-07 51.6 15.4 161 247-407 17-186 (432)
279 PF06779 DUF1228: Protein of u 97.0 0.0083 1.8E-07 41.5 8.1 69 249-317 9-77 (85)
280 PF01733 Nucleoside_tran: Nucl 96.9 0.00018 3.8E-09 64.9 -0.6 116 272-389 187-303 (309)
281 KOG0637 Sucrose transporter an 96.5 0.0018 3.9E-08 59.3 3.0 159 231-391 32-200 (498)
282 KOG3098 Uncharacterized conser 96.5 0.08 1.7E-06 49.8 13.7 98 40-138 289-407 (461)
283 KOG1479 Nucleoside transporter 96.4 0.25 5.5E-06 45.4 15.6 184 234-422 20-205 (406)
284 COG0477 ProP Permeases of the 96.4 0.18 3.8E-06 45.2 15.2 134 251-396 21-158 (338)
285 PRK03612 spermidine synthase; 96.3 0.11 2.3E-06 50.6 13.5 136 25-163 45-188 (521)
286 PF02487 CLN3: CLN3 protein; 96.2 0.067 1.5E-06 49.4 11.3 108 28-139 279-391 (402)
287 PF03219 TLC: TLC ATP/ADP tran 95.0 2 4.4E-05 41.3 16.6 116 280-395 72-205 (491)
288 KOG1237 H+/oligopeptide sympor 94.9 1.7 3.7E-05 42.8 16.2 160 254-413 60-237 (571)
289 PF00854 PTR2: POT family; In 94.7 0.16 3.5E-06 47.3 8.6 120 298-422 2-124 (372)
290 PRK03612 spermidine synthase; 94.7 1.3 2.8E-05 43.2 14.7 142 262-414 45-191 (521)
291 COG3202 ATP/ADP translocase [E 94.7 3.9 8.5E-05 38.8 16.8 131 265-396 59-210 (509)
292 KOG3097 Predicted membrane pro 94.3 2.7 5.9E-05 37.5 14.0 98 40-138 68-180 (390)
293 KOG3880 Predicted small molecu 94.0 0.034 7.4E-07 48.4 2.1 132 33-171 65-198 (409)
294 TIGR00939 2a57 Equilibrative N 93.7 2.5 5.4E-05 40.3 14.0 31 337-369 110-140 (437)
295 PF13000 Acatn: Acetyl-coenzym 93.1 1.1 2.4E-05 42.4 10.4 52 253-304 21-77 (544)
296 KOG2601 Iron transporter [Inor 93.1 0.073 1.6E-06 47.8 2.7 31 356-386 408-438 (503)
297 KOG3574 Acetyl-CoA transporter 93.0 1.4 3.1E-05 40.1 10.5 62 239-303 38-104 (510)
298 KOG2881 Predicted membrane pro 92.0 7 0.00015 33.3 12.9 36 275-310 248-283 (294)
299 KOG4332 Predicted sugar transp 90.0 4.5 9.7E-05 35.1 9.8 132 31-166 283-425 (454)
300 KOG3880 Predicted small molecu 89.8 1.5 3.2E-05 38.7 7.0 117 23-139 280-398 (409)
301 PF07857 DUF1632: CEO family ( 87.4 6.8 0.00015 33.9 9.5 59 366-424 75-139 (254)
302 PF03547 Mem_trans: Membrane t 85.6 6.1 0.00013 37.0 9.3 18 278-295 6-23 (385)
303 PF06027 DUF914: Eukaryotic pr 85.2 30 0.00064 31.6 13.0 37 385-421 271-307 (334)
304 PF05297 Herpes_LMP1: Herpesvi 82.8 0.39 8.4E-06 40.9 0.0 16 411-426 176-191 (381)
305 KOG2601 Iron transporter [Inor 81.8 43 0.00092 31.0 12.0 143 256-398 51-203 (503)
306 KOG4830 Predicted sugar transp 81.2 0.32 7E-06 41.4 -1.0 39 25-63 47-94 (412)
307 PF07857 DUF1632: CEO family ( 77.2 22 0.00048 30.8 8.8 25 148-172 112-136 (254)
308 COG1288 Predicted membrane pro 75.5 53 0.0011 30.9 10.9 109 58-175 132-245 (481)
309 PF02990 EMP70: Endomembrane p 73.4 98 0.0021 30.5 13.3 26 218-244 248-273 (521)
310 PF07672 MFS_Mycoplasma: Mycop 72.7 47 0.001 29.0 9.4 103 33-136 144-256 (267)
311 COG5336 Uncharacterized protei 72.0 4.1 8.8E-05 29.3 2.5 34 365-398 37-70 (116)
312 COG5336 Uncharacterized protei 71.9 31 0.00068 25.0 6.8 33 278-310 53-86 (116)
313 KOG3810 Micronutrient transpor 70.5 15 0.00033 33.4 6.2 104 32-138 273-378 (433)
314 PF01733 Nucleoside_tran: Nucl 69.1 1.7 3.7E-05 39.2 0.3 105 35-139 187-304 (309)
315 PRK11588 hypothetical protein; 65.5 1.4E+02 0.003 29.1 14.0 41 50-90 136-178 (506)
316 KOG1278 Endosomal membrane pro 60.9 46 0.00099 32.2 7.7 39 256-294 347-386 (628)
317 PF06912 DUF1275: Protein of u 59.5 1.1E+02 0.0023 25.8 12.5 16 38-53 54-69 (209)
318 PF11947 DUF3464: Protein of u 55.1 62 0.0013 25.5 6.4 52 81-135 95-146 (153)
319 PF03606 DcuC: C4-dicarboxylat 52.8 1.1E+02 0.0025 29.5 9.3 16 287-302 104-119 (465)
320 PF02694 UPF0060: Uncharacteri 51.6 33 0.00072 24.9 4.1 47 267-313 54-100 (107)
321 COG4769 Predicted membrane pro 51.3 21 0.00046 28.1 3.3 50 40-95 83-132 (181)
322 PRK02237 hypothetical protein; 48.5 57 0.0012 23.8 4.9 48 267-314 56-103 (109)
323 COG1268 BioY Uncharacterized c 48.5 66 0.0014 26.4 5.9 23 37-59 89-111 (184)
324 PF02694 UPF0060: Uncharacteri 47.6 26 0.00057 25.4 3.1 50 30-79 54-103 (107)
325 KOG4255 Uncharacterized conser 46.7 2.3E+02 0.005 25.9 10.9 37 245-281 24-60 (439)
326 PF11947 DUF3464: Protein of u 46.6 84 0.0018 24.8 6.0 29 356-384 116-144 (153)
327 COG2274 SunT ABC-type bacterio 45.6 3.6E+02 0.0079 27.8 12.0 23 272-294 162-184 (709)
328 PF02632 BioY: BioY family; I 45.1 76 0.0017 25.0 5.7 40 37-76 60-99 (148)
329 COG4262 Predicted spermidine s 44.1 2.7E+02 0.0058 25.8 10.5 85 26-110 39-132 (508)
330 PRK02237 hypothetical protein; 42.1 49 0.0011 24.1 3.8 50 30-79 56-105 (109)
331 PF06570 DUF1129: Protein of u 37.1 2.5E+02 0.0054 23.5 10.3 110 62-171 82-197 (206)
332 PF11299 DUF3100: Protein of u 33.1 73 0.0016 27.0 4.0 51 87-138 175-225 (241)
333 PF10785 NADH-u_ox-rdase: NADH 32.2 1.7E+02 0.0036 20.5 5.1 42 42-83 30-78 (86)
334 TIGR01667 YCCS_YHJK integral m 31.3 3.6E+02 0.0078 27.9 9.4 51 48-98 41-96 (701)
335 PF06645 SPC12: Microsomal sig 31.0 1.7E+02 0.0038 19.8 5.4 20 83-102 38-57 (76)
336 COG1422 Predicted membrane pro 30.9 3.1E+02 0.0068 22.8 11.7 12 127-138 30-41 (201)
337 KOG4830 Predicted sugar transp 30.5 1E+02 0.0022 26.9 4.6 50 250-299 35-93 (412)
338 PF04281 Tom22: Mitochondrial 29.8 1.5E+02 0.0033 22.9 5.0 25 107-131 59-83 (137)
339 PRK10263 DNA translocase FtsK; 29.6 4.6E+02 0.0099 29.2 9.9 20 276-295 61-80 (1355)
340 TIGR02230 ATPase_gene1 F0F1-AT 26.8 2.5E+02 0.0054 20.4 5.8 31 43-73 55-86 (100)
341 PF11151 DUF2929: Protein of u 26.8 1.7E+02 0.0038 18.5 5.6 46 128-175 11-56 (57)
342 TIGR00986 3a0801s05tom22 mitoc 26.8 1.8E+02 0.004 22.6 4.9 24 107-130 57-80 (145)
343 PF11298 DUF3099: Protein of u 26.6 1.5E+02 0.0032 20.0 3.9 60 53-116 10-69 (73)
344 COG1457 CodB Purine-cytosine p 26.0 6E+02 0.013 24.5 20.1 36 265-300 126-161 (442)
345 TIGR01666 YCCS hypothetical me 25.3 7.8E+02 0.017 25.5 11.1 51 47-97 40-95 (704)
346 TIGR02230 ATPase_gene1 F0F1-AT 25.2 2.7E+02 0.0059 20.2 6.9 13 287-299 62-75 (100)
347 PTZ00370 STEVOR; Provisional 25.2 61 0.0013 28.4 2.4 32 397-428 255-286 (296)
348 PF05255 UPF0220: Uncharacteri 24.8 3.7E+02 0.0081 21.7 8.2 24 149-172 56-79 (166)
349 PF01528 Herpes_glycop: Herpes 24.5 5.9E+02 0.013 23.8 9.2 16 100-115 41-56 (374)
350 PF13536 EmrE: Multidrug resis 24.5 2.9E+02 0.0062 20.2 7.3 10 292-301 84-93 (113)
351 PF01914 MarC: MarC family int 23.2 4.5E+02 0.0097 22.0 7.6 38 361-398 29-66 (203)
352 PF07456 Hpre_diP_synt_I: Hept 23.0 3.2E+02 0.0069 21.6 5.7 49 38-92 69-117 (148)
353 PF05814 DUF843: Baculovirus p 21.8 1.7E+02 0.0036 20.2 3.4 14 384-397 7-20 (83)
354 PF13937 DUF4212: Domain of un 21.8 2.8E+02 0.0061 19.2 4.7 22 147-168 41-62 (81)
355 TIGR01478 STEVOR variant surfa 21.5 70 0.0015 28.0 2.0 31 397-427 259-289 (295)
356 PF06123 CreD: Inner membrane 21.1 7.4E+02 0.016 23.8 9.4 37 278-314 302-338 (430)
357 PRK13629 threonine/serine tran 21.0 7.6E+02 0.016 23.8 15.4 43 113-162 18-60 (443)
358 PF07760 DUF1616: Protein of u 20.5 6.2E+02 0.013 22.6 9.7 53 86-139 22-74 (287)
359 PRK03818 putative transporter; 20.1 8.8E+02 0.019 24.2 10.3 85 29-114 434-520 (552)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-45 Score=335.79 Aligned_cols=429 Identities=28% Similarity=0.501 Sum_probs=360.1
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH---
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA--- 80 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--- 80 (459)
..++|+++.+.......+.+ +--+...+.+.+++.+|.++|+++.|+++||+|||..+.++.++..++.++..++
T Consensus 36 ~i~~f~n~t~~~r~g~~~s~--~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~ 113 (485)
T KOG0569|consen 36 LIKSFINETLIERYGLPLSD--STLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA 113 (485)
T ss_pred HHHHHHHHHHHHhcCCCCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566666665543321111 1122346788999999999999999999999999999999999988888877665
Q ss_pred HhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHH
Q 012626 81 ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAP 160 (459)
Q Consensus 81 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~ 160 (459)
+++++++++|++.|+..|........++.|..|++.||......+.+..+|.+++..++.-....+...|++.+.+..++
T Consensus 114 ~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~ 193 (485)
T KOG0569|consen 114 PSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIP 193 (485)
T ss_pred hhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999998885433444456799999999999
Q ss_pred HHHHHHHHhccCCChHHHHh-hCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHh---hcccCCchHHHhcccc-hhHHHH
Q 012626 161 ALMMTVGGILLPETPNSLIE-RGKKVEGRRVLEKIRGTKEVNAEYQDMVDASEL---ANSIKHPFRNILERRN-RPQLVM 235 (459)
Q Consensus 161 ~~~~~~~~~~~~e~p~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~ 235 (459)
+++..+...++||||||+.. +++.++|++.++..++.++.+.+.++..++.++ .++++.+++++++++. +++..+
T Consensus 194 ~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i 273 (485)
T KOG0569|consen 194 ALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLI 273 (485)
T ss_pred HHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHH
Confidence 99999999999999999998 899999999999999988665555443333222 2225667889998754 555677
Q ss_pred HHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHH
Q 012626 236 AIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVS 315 (459)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 315 (459)
.+.+.....+.+.+...+|...++++.|++..++.+.....++...+.++++.++.||.|||++++.+..++.+..+++.
T Consensus 274 ~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~ 353 (485)
T KOG0569|consen 274 GIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMS 353 (485)
T ss_pred HHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 77888888999999999999999999999999999999999999999999999999999999999999999888888776
Q ss_pred HHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 316 IILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
......... .....+..+...+++...++.+.+|+.+.+.+|++|++.|+.++++.....++..++....+..+.+
T Consensus 354 ~~~~l~~~~----~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~ 429 (485)
T KOG0569|consen 354 IALFLSNSF----GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN 429 (485)
T ss_pred HHHHHHHHh----hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654321000 0111234567778889999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHHHhheeeccCCCCCCHHHHHHHHhcc
Q 012626 396 SFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMILLWRKH 438 (459)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (459)
..|...++.+.+.+++..+..+..+||||+|+..|+.++.+++
T Consensus 430 ~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 430 VIGPYVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HhcchhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9998888889999999999999999999999999988887665
No 2
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.1e-42 Score=332.28 Aligned_cols=396 Identities=19% Similarity=0.243 Sum_probs=279.0
Q ss_pred cccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHh------HHHHHHHHHHHhhccc
Q 012626 25 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN------LAMLLTGRILLGVGIG 98 (459)
Q Consensus 25 ~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~ 98 (459)
.+.++.+.+++.+.+.++..++++++|+++||+|||+++.++.+++.++.++++++++ ++.++++|+++|++.|
T Consensus 51 ~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 51 GPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHh
Confidence 4566778899999999999999999999999999999999999999999999988865 7899999999999999
Q ss_pred ccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc---------------------cccchhHHHHHhh
Q 012626 99 FGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK---------------------LETWGWRLSLGLA 157 (459)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~---------------------~~~~gwr~~f~~~ 157 (459)
...+....+++|++|+++|++++++......+|.++++.++..... ...++||+.|.+.
T Consensus 131 ~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~ 210 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFG 210 (502)
T ss_pred hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHH
Confidence 9999999999999999999999999999999999999887532211 1124799999999
Q ss_pred hHHHHHHHHHHhccCCChHHHHhhCcHH-HHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccc---hhHH
Q 012626 158 AAPALMMTVGGILLPETPNSLIERGKKV-EGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRN---RPQL 233 (459)
Q Consensus 158 ~~~~~~~~~~~~~~~e~p~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 233 (459)
++++++..+..+++||||+|+..+++.+ ++++.+++....+..+. .++.++.+++++..+.+++++++++. .++.
T Consensus 211 ~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 289 (502)
T TIGR00887 211 AVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAE-PDEVEKASTAVEVPKASWSDFFTHFFKWRHGKH 289 (502)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccC-cccccchhccccchhhhHHHHHHHHhhhHHHHH
Confidence 9888888777888999999999887764 45655555543221111 01100000111111235677765322 2122
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHH------------HHHHHHHHHHHHHHHHHHHHHhhCCchhhh
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLY------------SSAMTGAVLASSTLISIATVDKLGRRALLI 301 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 301 (459)
.+......+.....++....+.|.++++.|++....+. ......++.+++.++.++++||+|||+.+.
T Consensus 290 ~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~ 369 (502)
T TIGR00887 290 LLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQL 369 (502)
T ss_pred HHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHH
Confidence 23222233333333445566788888888887543221 233444566778889999999999999988
Q ss_pred hhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHH
Q 012626 302 SGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLF 381 (459)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 381 (459)
.+.....++..++...... ..........++.....+.+..+..+.+.+|.+|++.|+++.|+.+.++++
T Consensus 370 ~~~~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~ 439 (502)
T TIGR00887 370 MGFFILTVLFFVLGFAYNH----------LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKA 439 (502)
T ss_pred HHHHHHHHHHHHHHHHHHh----------cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhh
Confidence 8777776666555543210 001111122222223334455566678889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc----------cch-hHHHHHHHHHHHHHhheeeccCCCCCCHHHHH
Q 012626 382 FTFVIAQIFLTLLCSF----------KFG-IFLFFAGWVTIMTIFVYFFLPETKGVPIEEMI 432 (459)
Q Consensus 382 g~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 432 (459)
+++++|.+.+.+.+.. ++. .++++++++.+ +.+..+++||+++++.+|++
T Consensus 440 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~i~~~~lpEt~~~~leei~ 500 (502)
T TIGR00887 440 GAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFL-GILFTLLIPETKGKSLEELS 500 (502)
T ss_pred HHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHH-HHHHheEeccCCCCCHHhhh
Confidence 9999999999998743 222 33444444444 44455778999998876653
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=7.9e-42 Score=333.34 Aligned_cols=402 Identities=17% Similarity=0.204 Sum_probs=300.4
Q ss_pred hhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 012626 10 HDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTG 89 (459)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (459)
+........+.+++++|++..+.+++.++++++.+++++++|+++||+|||+.+++++++.++++++++++++++.++++
T Consensus 182 d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~ 261 (742)
T TIGR01299 182 EVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFC 261 (742)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 33445556667778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc-----------cccchhHHHHHhhh
Q 012626 90 RILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK-----------LETWGWRLSLGLAA 158 (459)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~-----------~~~~gwr~~f~~~~ 158 (459)
|+++|++.++..+...+++.|++|+++|++.++++..++.+|.++++.++..... ....+||+.+++.+
T Consensus 262 R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~ 341 (742)
T TIGR01299 262 RLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCA 341 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999887533221 11247999999998
Q ss_pred HHHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCccc---HHH----HHHHHHHHh------hcccC-------
Q 012626 159 APALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVN---AEY----QDMVDASEL------ANSIK------- 218 (459)
Q Consensus 159 ~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~------~~~~~------- 218 (459)
+++++.++..+++||||+|+..+++.+++.+.+++++..+... +.. +..+..... ++..+
T Consensus 342 lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (742)
T TIGR01299 342 FPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCF 421 (742)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcch
Confidence 8888877777889999999999999999999999988765321 110 000000000 00000
Q ss_pred -----------CchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHhc-------------------------
Q 012626 219 -----------HPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM------------------------- 262 (459)
Q Consensus 219 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 262 (459)
..++++++.+.+++ .+.+.+.++.....++.+..|.|.++++.
T Consensus 422 ~~~~~~~~~~~~~~~~lf~~~~~~~-tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (742)
T TIGR01299 422 VRALSEGGGIWGNFLRCFNPEVREI-TIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFT 500 (742)
T ss_pred hhhhhhhhhHHHHHHHHcCccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccc
Confidence 12445555544444 44455556667778888999999775331
Q ss_pred -----------------CC-----C----------------C--------------------------------------
Q 012626 263 -----------------GF-----K----------------G-------------------------------------- 266 (459)
Q Consensus 263 -----------------g~-----~----------------~-------------------------------------- 266 (459)
|+ + .
T Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (742)
T TIGR01299 501 LENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNK 580 (742)
T ss_pred hhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccC
Confidence 00 0 0
Q ss_pred --------------chhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchh
Q 012626 267 --------------DASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSF 332 (459)
Q Consensus 267 --------------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (459)
........+..++.+++.+++++++||+|||+++..+.++.+++++++.+.. .
T Consensus 581 ~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~------------s- 647 (742)
T TIGR01299 581 EGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN------------S- 647 (742)
T ss_pred CccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc------------c-
Confidence 0123345667788999999999999999999999888888777776665431 1
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 012626 333 SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIM 412 (459)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 412 (459)
....++..++.+++....+ +..+.+++|.+|++.|++++|+.+..+.+|++++|.+.+.+.+.. ....+++.+++.++
T Consensus 648 ~~~ll~~~~l~g~~~~~~~-~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-~~~pf~i~a~~lll 725 (742)
T TIGR01299 648 ESAMIALLCLFGGLSIAAW-NALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-KAAPILFASAALAC 725 (742)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHH
Confidence 2223333334444444333 344688899999999999999999999999999999999887654 33444445555555
Q ss_pred HHhheeeccCCCCCC
Q 012626 413 TIFVYFFLPETKGVP 427 (459)
Q Consensus 413 ~~~~~~~~~~~~~~~ 427 (459)
+.++..++||++++.
T Consensus 726 ~~ll~~~LPET~~~~ 740 (742)
T TIGR01299 726 GGLLALKLPDTRGQV 740 (742)
T ss_pred HHHHHHhCCCCcccc
Confidence 555556679887764
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=4e-41 Score=324.52 Aligned_cols=406 Identities=28% Similarity=0.502 Sum_probs=295.0
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH------------HhHHHHHH
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA------------ANLAMLLT 88 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~ 88 (459)
..++++.++.+.+++.+++.++..++++++|+++||+|||++++.+.+++.++.++++++ ++++.+++
T Consensus 46 ~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 125 (479)
T PRK10077 46 QNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVI 125 (479)
T ss_pred ccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHH
Confidence 445569999999999999999999999999999999999999999999999998888763 33577899
Q ss_pred HHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhh------ccccchhHHHHHhhhHHHH
Q 012626 89 GRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ------KLETWGWRLSLGLAAAPAL 162 (459)
Q Consensus 89 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~------~~~~~gwr~~f~~~~~~~~ 162 (459)
+|+++|++.|...+...++++|++|+++|++++++.+.+..+|.++++.++.... ..+..|||+.|++.+++.+
T Consensus 126 ~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~ 205 (479)
T PRK10077 126 YRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPAL 205 (479)
T ss_pred HHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999887743222 1234689999999888887
Q ss_pred HHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHH
Q 012626 163 MMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMF 242 (459)
Q Consensus 163 ~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (459)
+..+..+++||+|+++..+++.+++++..++..+.++.+...++..+....+. ...+..+. ..............+
T Consensus 206 ~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~ 281 (479)
T PRK10077 206 LFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGR---KTGGKLLM-FGVGVIVIGVMLSVF 281 (479)
T ss_pred HHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhh---hhhhhhcc-hhHHHHHHHHHHHHH
Confidence 77766777999999998888888777766666544332221111111110000 00111111 111111222222333
Q ss_pred hhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhcc
Q 012626 243 QILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 322 (459)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (459)
.....+....++.|.+.++.|.+...........++..+++.++.++++||+|||+.+..+....+++.+.+.....
T Consensus 282 ~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~--- 358 (479)
T PRK10077 282 QQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFY--- 358 (479)
T ss_pred HHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHh---
Confidence 34444556677888888889998887777778888899999999999999999999999888888877766654321
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH------hh
Q 012626 323 GPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL------CS 396 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~------~~ 396 (459)
............+++..+++..+.+..+.+++|.+|++.|+++.|+.+..++++.++++.+++.+. +.
T Consensus 359 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~ 432 (479)
T PRK10077 359 ------TQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAH 432 (479)
T ss_pred ------cCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhh
Confidence 011122233344444555555556666789999999999999999999999999999988776554 34
Q ss_pred ccchh-HHHHHHHHHHHHHhheeeccCCCCCCHHHHHHHHhccc
Q 012626 397 FKFGI-FLFFAGWVTIMTIFVYFFLPETKGVPIEEMILLWRKHW 439 (459)
Q Consensus 397 ~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (459)
.++.. +......+.+..++.+++.||+|+++.+|.++..+++.
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 476 (479)
T PRK10077 433 FHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPET 476 (479)
T ss_pred ccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhcc
Confidence 55443 34444444555555666788999888887766655443
No 5
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3.1e-39 Score=311.26 Aligned_cols=408 Identities=37% Similarity=0.658 Sum_probs=340.1
Q ss_pred hhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHH
Q 012626 30 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLS 109 (459)
Q Consensus 30 ~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 109 (459)
.+.+++.+...++.++++++.|+++|++|||+.++++.+++.++.+++++++|+++++++|+++|+|.|......+.+++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 46699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhhCcHHHHHH
Q 012626 110 EMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRR 189 (459)
Q Consensus 110 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~ 189 (459)
|..|++.||...+..+....+|..++..++...... ..+||..+.+..+++++..+..+++||+|+|+.++++.+++++
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~ 247 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-YAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKR 247 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-CccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHH
Confidence 999999999999999999999999996664333322 1589999999999999888888889999999999999999999
Q ss_pred HHHHHhCCC--cccHHHHHHHHHHHh---hcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHhcCC
Q 012626 190 VLEKIRGTK--EVNAEYQDMVDASEL---ANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGF 264 (459)
Q Consensus 190 ~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 264 (459)
.++++++.+ +...+.++.+..... ..+.+..+.+++++...++..+...+..+.+..+.+...+|.+.+++..|.
T Consensus 248 ~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~ 327 (513)
T KOG0254|consen 248 SLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGL 327 (513)
T ss_pred HHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCC
Confidence 999999843 333333333211111 111222466777766777788889999999999999999999999999888
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHH
Q 012626 265 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFV 344 (459)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
+... .......++..+++..++..+.||+|||+.++.+...+.++.+++.........+.. ......+..+...+++.
T Consensus 328 ~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v 405 (513)
T KOG0254|consen 328 KSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPN-SSKGAGWLAIVFLCLFI 405 (513)
T ss_pred CCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCC-cccchhHHHHHHHHHHH
Confidence 7554 666777788888888889999999999999999999999999888766533211100 12344667788888899
Q ss_pred HHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHH-hheeeccC
Q 012626 345 LAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTI-FVYFFLPE 422 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~~~~~~~~ 422 (459)
..++.++.++.+.+.+|.+|.+.|+.+.++....+++...+....+..+.+..+ ...++.+.+++.+... +.++++||
T Consensus 406 ~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pE 485 (513)
T KOG0254|consen 406 FSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPE 485 (513)
T ss_pred HHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEccc
Confidence 999999999999999999999999999999999999999988888877777765 6677777777777777 78999999
Q ss_pred CCCCCHHHHHHHHhcccc
Q 012626 423 TKGVPIEEMILLWRKHWF 440 (459)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~ 440 (459)
+|+++.+++++..++...
T Consensus 486 Tkg~sleei~~~~~~~~~ 503 (513)
T KOG0254|consen 486 TKGLTLEEINELFEEGIK 503 (513)
T ss_pred CCCCcHHHHHHHHHcCCc
Confidence 999999999887765543
No 6
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.6e-39 Score=313.65 Aligned_cols=387 Identities=18% Similarity=0.270 Sum_probs=283.8
Q ss_pred cCCCCCCccccC---chhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 012626 17 KHAHENNYCKYD---NQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILL 93 (459)
Q Consensus 17 ~~~~~~~~~~~s---~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 93 (459)
..+.+.+|+|++ +.+.++..+++.++..+++++.|+++||+|||+++.++.++.+++.+++++++|++.+++.|++.
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 190 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV 190 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 456678899999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCC
Q 012626 94 GVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 173 (459)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e 173 (459)
|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.... +||+.|++.+++.++..+..+++||
T Consensus 191 G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-----~wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 191 GMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP-----DWRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999998853322 4999999999988887777788999
Q ss_pred ChHHHHhhCcHHHHHHHHHHHhCCCcccHHHH--HHH-HHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHH
Q 012626 174 TPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQ--DMV-DASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINS 250 (459)
Q Consensus 174 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (459)
+|+|+..+++.+++.+.+++..+.++.....+ +.. ++...++.++.+.+++++++..+...+......+.....++.
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG 345 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888777655443221111 111 111111122346778887776555554444333322222222
Q ss_pred HHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc
Q 012626 251 ILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 330 (459)
Q Consensus 251 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (459)
.+......+.+ ........++..+++.++.+++.||+|||+.+..+....+++.+++.... .
T Consensus 346 ----~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~-----------~ 407 (505)
T TIGR00898 346 ----LVLDLGNLGGN---IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP-----------V 407 (505)
T ss_pred ----HhccccccCCC---hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC-----------C
Confidence 22223334443 23445566778889999999999999999999888877777666554431 1
Q ss_pred hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 012626 331 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 410 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (459)
...+......++..++....+ +..+.+.+|.+|++.|+++.|+.+..+.+|++++|.+.+ +.+ .+....+.+.+.+.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~ 484 (505)
T TIGR00898 408 DLYFLRTALAVLGKFGITSAF-QMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLA 484 (505)
T ss_pred CchHHHHHHHHHHHHHHHHHH-HHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHH
Confidence 112223333333333333333 344688899999999999999999999999999999998 443 33333444444444
Q ss_pred HHHHhheeeccCCCCCCHH
Q 012626 411 IMTIFVYFFLPETKGVPIE 429 (459)
Q Consensus 411 l~~~~~~~~~~~~~~~~~~ 429 (459)
+++.+..+++||+++++.+
T Consensus 485 ~~~~~~~~~lpet~~~~l~ 503 (505)
T TIGR00898 485 LLAGILTLFLPETKGVPLP 503 (505)
T ss_pred HHHHHHHHcCcCCCCCCCC
Confidence 4444455677888877653
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=5.9e-39 Score=308.35 Aligned_cols=386 Identities=15% Similarity=0.196 Sum_probs=260.1
Q ss_pred hhhhhhhhhhcCCCCCCccccCchh----HHH--HHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH
Q 012626 7 KFFHDVYLKKKHAHENNYCKYDNQG----LAA--FTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA 80 (459)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~s~~~----~~~--~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~ 80 (459)
+++|-.......+.+.++++.+.++ ++. ..++.++++.++++++|+++||+|||+++..+++++++++++++++
T Consensus 28 ~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~ 107 (490)
T PRK10642 28 EWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLI 107 (490)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhc
Confidence 4445555455555566666533322 222 2577889999999999999999999999999999999999999999
Q ss_pred HhHHH--------HHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhh------ccc
Q 012626 81 ANLAM--------LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ------KLE 146 (459)
Q Consensus 81 ~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~------~~~ 146 (459)
+|++. ++++|+++|++.|+.++...++++|++|+++|+++.++...+..+|..+++.+..... ...
T Consensus 108 ~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~ 187 (490)
T PRK10642 108 PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFL 187 (490)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhc
Confidence 99874 8999999999999999999999999999999999999999998899888876632211 123
Q ss_pred cchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhc
Q 012626 147 TWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILE 226 (459)
Q Consensus 147 ~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (459)
.+|||+.|++.++++++..++...+||+|+|...+++.++..+ +...++++.+++++++
T Consensus 188 ~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~ 246 (490)
T PRK10642 188 DWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR---------------------EGLQDGPKVSFKEIAT 246 (490)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc---------------------ccccccccCCHHHHHH
Confidence 5799999999887777666666678999987543221111000 0000112335566665
Q ss_pred ccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhH
Q 012626 227 RRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGI 305 (459)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 305 (459)
+ .++...... ...+.....++....|.|.++++ +|++..+.........++.+++.++.|+++||+|||+.+..+..
T Consensus 247 ~-~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~ 324 (490)
T PRK10642 247 K-HWRSLLTCI-GLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSV 324 (490)
T ss_pred H-hHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3 222222222 22222334456667788888754 78888777777778888899999999999999999998877665
Q ss_pred HHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHH
Q 012626 306 QMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFV 385 (459)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 385 (459)
...+....+.... ...+........++.+.+.+...+.. ..+..|.+|++.|+++.|+.+.++.+++.+
T Consensus 325 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~~~g~~-~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~ 393 (490)
T PRK10642 325 ALFVLAIPAFILI----------NSNVIGLIFAGLLMLAVILNCFTGVM-ASTLPAMFPTHIRYSALAAAFNISVLVAGL 393 (490)
T ss_pred HHHHHHHHHHHHH----------hCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCccchHHHHHHHHHHHHHHHH
Confidence 4333322222111 01112222222233333333233333 456679999999999999877778888899
Q ss_pred HHHHHHHHHhhcc-chhHHHHHHHHHHHHHhheeeccCCCCC
Q 012626 386 IAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFVYFFLPETKGV 426 (459)
Q Consensus 386 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 426 (459)
+|.+.+++.+..+ +.....+..+..+++++..+++||++++
T Consensus 394 ~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~ 435 (490)
T PRK10642 394 TPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANR 435 (490)
T ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 9999999887654 3333333344444444455566877554
No 8
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.7e-38 Score=303.37 Aligned_cols=399 Identities=36% Similarity=0.642 Sum_probs=293.5
Q ss_pred cCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH---hHHHHHHHHHHHhhcccccchh
Q 012626 27 YDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA---NLAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 27 ~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~ 103 (459)
.+..+.+++.+++.++..++++++|+++||+|||+++..+.+++.++.+++.+.. +++.+++.|+++|++.+...+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 147 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASAL 147 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhH
Confidence 3489999999999999999999999999999999999999999999999986653 4568999999999999999999
Q ss_pred hhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHh-hhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhhC
Q 012626 104 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN-YGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERG 182 (459)
Q Consensus 104 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~-~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~ 182 (459)
..+++.|++|+++|++++++.+.+..+|..+++.++ ......+..+||+.|++.++..++..+..+++||+|+++..++
T Consensus 148 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 227 (481)
T TIGR00879 148 VPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKG 227 (481)
T ss_pred HHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcC
Confidence 999999999999999999999999999999999994 1144445679999999977777776666777999998887777
Q ss_pred cHHHHHHHHHHHhCCCcccHHHHHHH-----HHHHhhcccCCchHHHhcccc--hhHHHHHHHHHHHhhhcchHHHHHhH
Q 012626 183 KKVEGRRVLEKIRGTKEVNAEYQDMV-----DASELANSIKHPFRNILERRN--RPQLVMAIFMPMFQILTGINSILFYA 255 (459)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (459)
+.++..+..++..+.++.+.+..+.. ....+.+..+..+.+.++..+ .++.++...+..+..........++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (481)
T TIGR00879 228 RVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYS 307 (481)
T ss_pred ChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHH
Confidence 77666555555443332222111100 000111111222344443221 34455555555555555556677888
Q ss_pred HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhH
Q 012626 256 PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSIL 335 (459)
Q Consensus 256 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (459)
|.+.++.|++..+.+.......++.+++.++.+++.||++||+.+..+.....++.+.+.........+ ........
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 384 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTG---SSKSSGNV 384 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCC---cccchhHH
Confidence 988888999998888889999999999999999999999999998888777666666555322110000 00011233
Q ss_pred HHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH-HHHHH
Q 012626 336 VVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV-TIMTI 414 (459)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 414 (459)
.+....+...+++.+..+....+..|.+|++.|+++.|+.+...+++++++|.+.+.+.++.++...+.+.+++ .+.++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i 464 (481)
T TIGR00879 385 AIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLI 464 (481)
T ss_pred HHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHH
Confidence 34444555556666666776778899999999999999999999999999999999999988876655554444 44445
Q ss_pred hheeeccCCCCCCH
Q 012626 415 FVYFFLPETKGVPI 428 (459)
Q Consensus 415 ~~~~~~~~~~~~~~ 428 (459)
+.+++.||+++++.
T Consensus 465 ~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 465 FVYFFLPETKGRTL 478 (481)
T ss_pred HHheecccCCCCCh
Confidence 55566677765543
No 9
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.9e-40 Score=286.92 Aligned_cols=388 Identities=13% Similarity=0.092 Sum_probs=295.0
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhH
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL 83 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
|..-|+.|...+...|.+.++.++|.+|+|++.+.+++.|.++.++.|.++||.++|+.+..++++.++.++++++++|.
T Consensus 38 Ya~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~ 117 (448)
T COG2271 38 YAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSL 117 (448)
T ss_pred HHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHH
Confidence 56668888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHH
Q 012626 84 AMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALM 163 (459)
Q Consensus 84 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~ 163 (459)
+.+.++.++.|...|..+|++...+..|+|++|||+..++++.+.++|..+.|++........+.+||..|++.++++++
T Consensus 118 ~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaii 197 (448)
T COG2271 118 FLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAII 197 (448)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999885325555666999999999999888
Q ss_pred HHHHH-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHH-HHhhcccCCchHHHh-cccchhHHHHHHHHH
Q 012626 164 MTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDA-SELANSIKHPFRNIL-ERRNRPQLVMAIFMP 240 (459)
Q Consensus 164 ~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (459)
..+.. +..+|+|+..-.. +.++..++..+. .++++....+.++++ +.-...+.+|.+.+.
T Consensus 198 val~~~~~~rd~Pqs~GLP-----------------~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a 260 (448)
T COG2271 198 VALILLFLLRDRPQSEGLP-----------------PIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALA 260 (448)
T ss_pred HHHHHHHHhCCCccccCCC-----------------CHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHH
Confidence 76655 4478888422110 000011111111 111111112333333 333344557788888
Q ss_pred HHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--CCchhhhhhhHHHHHHHHHHHHH
Q 012626 241 MFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKL--GRRALLISGGIQMITCQVIVSII 317 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~ 317 (459)
.+.....-+.+..|.|.|+.+ +|++...+....+.+-.++++|.+++|+++||+ |||.+..+.+.......++....
T Consensus 261 ~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~ 340 (448)
T COG2271 261 NVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWL 340 (448)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHc
Confidence 888888888999999999877 999999999999999999999999999999997 66766555444443333333332
Q ss_pred HhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHH-HHHHHHHHHHHHHhh
Q 012626 318 LGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLF-FTFVIAQIFLTLLCS 396 (459)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~~~~~~~ 396 (459)
. ++.+.++...++...++. -.+..-+.-....|..|.+..|++.|+...++++ |...+....|++.|.
T Consensus 341 ~----------~~~~~~l~~~~l~~iGf~-IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 341 A----------PNGSYLLDAILLFIIGFL-IYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred C----------CCccHHHHHHHHHHHHHH-HhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 1 112223333222222222 2222223345567999999999999999999999 888999999999999
Q ss_pred ccchhHHHHHHHHHHHHHhheee
Q 012626 397 FKFGIFLFFAGWVTIMTIFVYFF 419 (459)
Q Consensus 397 ~~~~~~~~~~~~~~l~~~~~~~~ 419 (459)
++|...+++..++++++.+++..
T Consensus 410 ~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 410 WGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred CCCcchHHHHHHHHHHHHHHHHH
Confidence 89877777776666666555443
No 10
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-38 Score=278.51 Aligned_cols=355 Identities=17% Similarity=0.170 Sum_probs=277.1
Q ss_pred hhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 012626 13 YLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRIL 92 (459)
Q Consensus 13 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 92 (459)
......+++.+|+|+|..+.|++.|.|.++++++.++...+.||+.||++++..+.++.++++++++++||+.++++|++
T Consensus 31 v~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~ 110 (394)
T COG2814 31 VPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARAL 110 (394)
T ss_pred HHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 44557788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hcc
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILL 171 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~ 171 (459)
.|+..|..++...++..+..|++||++++++...+..++.++|.++ +....+.+|||..|++.++++++..+.. ..+
T Consensus 111 ~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPL--Gt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~l 188 (394)
T COG2814 111 AGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPL--GTFLGQLFGWRATFLAIAVLALLALLLLWKLL 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccH--HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999 7777888999999999999998887665 457
Q ss_pred C-CChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHH
Q 012626 172 P-ETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINS 250 (459)
Q Consensus 172 ~-e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (459)
| .++ .++++.+.++.++..+++.+........+.....+..
T Consensus 189 P~~~~--------------------------------------~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ 230 (394)
T COG2814 189 PPSEI--------------------------------------SGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFAL 230 (394)
T ss_pred CCccC--------------------------------------CCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhh
Confidence 8 111 0111222222332222333344444444444444445
Q ss_pred HHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc
Q 012626 251 ILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 330 (459)
Q Consensus 251 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (459)
+.|..|.+.+..|++....++....++++.++|+.++|++.|| +.|+.+........+..+.+.+..
T Consensus 231 ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~------------ 297 (394)
T COG2814 231 YTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG------------ 297 (394)
T ss_pred HHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc------------
Confidence 5555566656699999999999999999999999999999999 888888777777777766665542
Q ss_pred hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 012626 331 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 410 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (459)
.+.+..+....++++......... ....++ .-++.+..+.+++....++|..++..++|.+.|+.++.....+.++..
T Consensus 298 ~~~~~~~~~~~~wg~a~~~~~~~~-~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~ 375 (394)
T COG2814 298 ASPALALALLFLWGFAFSPALQGL-QTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALL 375 (394)
T ss_pred chHHHHHHHHHHHHHHhhhhhhHH-HHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Confidence 223333333333333333222211 233334 225789999999999999999999999999999999888888888887
Q ss_pred HHHHhheeeccC
Q 012626 411 IMTIFVYFFLPE 422 (459)
Q Consensus 411 l~~~~~~~~~~~ 422 (459)
+.+..+.+...+
T Consensus 376 ~~a~~~~~~~~~ 387 (394)
T COG2814 376 LLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHh
Confidence 777766554443
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=6.9e-38 Score=294.19 Aligned_cols=382 Identities=15% Similarity=0.149 Sum_probs=268.4
Q ss_pred hHHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 012626 3 AFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN 82 (459)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
.|..+|.|+...+...+.+++|+|+++.+.|++.+++++++++++++.|+++||+|||+++..++++++++++++++++|
T Consensus 16 ~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~ 95 (412)
T TIGR02332 16 LFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATG 95 (412)
T ss_pred HHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcC
Confidence 46678889999998888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc----cccchhHHHHHhhh
Q 012626 83 LAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK----LETWGWRLSLGLAA 158 (459)
Q Consensus 83 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~----~~~~gwr~~f~~~~ 158 (459)
++.+++.|+++|++.+...+....++.|++|+++|++++++++.+.++|.+++++++..... .+..|||+.|++.+
T Consensus 96 ~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~ 175 (412)
T TIGR02332 96 PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEG 175 (412)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998543321 13469999999988
Q ss_pred HHHHHHHHH-HhccCCChHH---HHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHH
Q 012626 159 APALMMTVG-GILLPETPNS---LIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLV 234 (459)
Q Consensus 159 ~~~~~~~~~-~~~~~e~p~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (459)
+++++..++ .+++||+|+. +.++ +.+...+..+......++.+ +.. ++.+...++.++.... +.+
T Consensus 176 ~~~l~~~~~~~~~~~~~p~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~-~~~ 244 (412)
T TIGR02332 176 FPSVILGVMTWFWLDDSPDKAKWLDEE----DKKALKEMIDNDQLTLEQPE---GAF---AHAAMPQRSMLREIFT-PAI 244 (412)
T ss_pred HHHHHHHHHHhhccCCCcccCCCCCHH----HHHHHHHHHHhccccccccc---ccc---ccccccHHHHHHHhcC-hHH
Confidence 887766544 4567998842 2111 11111111110000000000 000 0001111111211111 223
Q ss_pred HHHHHHHHhhhcchHHHHHhHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhh-hhhHHHHHHH
Q 012626 235 MAIFMPMFQILTGINSILFYAPVLFQSM--GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLI-SGGIQMITCQ 311 (459)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~~~ 311 (459)
+...+..++....+..+..|.|.+++++ +++..+++.......++.+++.++.|+++||+++|+... .......++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~ 324 (412)
T TIGR02332 245 MLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW 324 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH
Confidence 4444555555556677888999999874 667788888899999999999999999999999777533 3322222222
Q ss_pred HHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 012626 312 VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFL 391 (459)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~ 391 (459)
.+.... ...........+...+.. ...+..+....|.+|++.|+++.|+.+..+++|++++|.+.|
T Consensus 325 -~~~~~~------------~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 325 -LLASAT------------DHNLIQLLGIIMASMGSF-SAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred -HHHHhc------------CCHHHHHHHHHHHHHHhh-hhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 111110 111111111122221211 112223455567899999999999999999999999999999
Q ss_pred HHHhhcc-chhHHHHHHHH
Q 012626 392 TLLCSFK-FGIFLFFAGWV 409 (459)
Q Consensus 392 ~~~~~~~-~~~~~~~~~~~ 409 (459)
.+.|..+ |...+.++++.
T Consensus 391 ~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 391 ILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred cccccCCCCchhHHHHHHH
Confidence 9999875 66655554443
No 12
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.8e-44 Score=345.00 Aligned_cols=401 Identities=35% Similarity=0.668 Sum_probs=318.7
Q ss_pred CchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH---hHHHHHHHHHHHhhcccccchhh
Q 012626 28 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA---NLAMLLTGRILLGVGIGFGNQAV 104 (459)
Q Consensus 28 s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~ 104 (459)
++.+.++..+...+|..+|+++.|.++||+|||+.++.+.++..+++++.++++ |++.+.++|+++|++.|...+..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 445689999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc-cchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhhCc
Q 012626 105 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE-TWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGK 183 (459)
Q Consensus 105 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~-~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~ 183 (459)
..++.|..|+++|++..++.+.++.+|.+++..++....... ..+||+.+++.++++++..+..+++||||+|+..++|
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~ 203 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGR 203 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccc
Confidence 999999999999999999999999999999988754332222 2569999999999998888878889999999999999
Q ss_pred HHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccc-hhHHHHHHHHHHHhhhcchHHHHHhHHHHHHhc
Q 012626 184 KVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRN-RPQLVMAIFMPMFQILTGINSILFYAPVLFQSM 262 (459)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (459)
.+|+++.+++.++.+..+++.++..++.++.++.+..++++++++. +++......+..+....+.....+|.+.+.+..
T Consensus 204 ~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~ 283 (451)
T PF00083_consen 204 DEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENA 283 (451)
T ss_pred ccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998776655444444443333333333356777776654 445555555666665666667777888888877
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHH
Q 012626 263 GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICL 342 (459)
Q Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (459)
+.+.. ........+...++.+++..+.||+|||+.+..+.....++.+.+..... .... .+.......+....+
T Consensus 284 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~i~~~~l 357 (451)
T PF00083_consen 284 GISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFF--LGVS--SSSWWSILSIVFLAL 357 (451)
T ss_pred ccccc--cccccccccccccccccccccccccccccccccccccccccccccccccc--cccc--cccccccccceeeee
Confidence 77666 33445555667777888889999999999999888877777666641000 0000 001113334444555
Q ss_pred HHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHhheeecc
Q 012626 343 FVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFVYFFLP 421 (459)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 421 (459)
....++.++.++.+.+.+|.+|++.|+++.|+....+++++++.+.+...+.+..+ +..+..+++++.+..++.++++|
T Consensus 358 ~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lp 437 (451)
T PF00083_consen 358 FFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLP 437 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEe
Confidence 55666767788888999999999999999999999999999999999998888877 67777778888888888999999
Q ss_pred CCCCCCHHHHHHH
Q 012626 422 ETKGVPIEEMILL 434 (459)
Q Consensus 422 ~~~~~~~~~~~~~ 434 (459)
|+++++.+|++++
T Consensus 438 ET~g~~l~ei~~~ 450 (451)
T PF00083_consen 438 ETKGKTLEEIQEM 450 (451)
T ss_pred eCCCCCHHHHHhh
Confidence 9999999998764
No 13
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.3e-36 Score=288.63 Aligned_cols=360 Identities=15% Similarity=0.174 Sum_probs=259.6
Q ss_pred HhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHH
Q 012626 6 KKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAM 85 (459)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
.+.++........+.+++++|+|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.
T Consensus 29 ~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~ 108 (426)
T PRK12307 29 FDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIM 108 (426)
T ss_pred HHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 34445555555666778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHH
Q 012626 86 LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT 165 (459)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~ 165 (459)
++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++++.+ .....+..+||+.|++..+..++..
T Consensus 109 l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l--~~~l~~~~~w~~~f~i~~~~~~~~~ 186 (426)
T PRK12307 109 LTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYF--MPSFAEAYGWRAAFFVGLLPVLLVI 186 (426)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHH--HHHHcccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988 4455566799999998655444433
Q ss_pred HHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhh
Q 012626 166 VGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQIL 245 (459)
Q Consensus 166 ~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (459)
......||++++..++.+. +++.. ....+..+..+++.++++..+....... ..+...
T Consensus 187 ~~~~~~p~~~~~~~~~~~~------------~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 244 (426)
T PRK12307 187 YIRARAPESKEWEEAKLSG------------KGKHS---------QSAWSVFSLSMKGLFNRAQFPLTLCVFI-VLFSIF 244 (426)
T ss_pred HHHHHCCCChHHHHhhhhc------------ccccc---------ccchhhhhHHHHHHHhhchHHHHHHHHH-HHHHHH
Confidence 3333457765432211000 00000 0000001123455665554433332222 222222
Q ss_pred cchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 246 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
.....+..+.|.++++.|.++.+.+.......++.+++.++.+++.||++||+.+..+.....+..+.+....
T Consensus 245 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~------- 317 (426)
T PRK12307 245 GANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIP------- 317 (426)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-------
Confidence 2333456677888888899988889888999999999999999999999999988777665554443332210
Q ss_pred ccccchhhhHHHHHHHHHHHH-HhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 012626 326 QELSKSFSILVVVVICLFVLA-FGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIF 402 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 402 (459)
.. .... ...++++.. ...+..+....++.|.+|++.|+++.|+.+....+++.++|.+.|.+.+..++...
T Consensus 318 ----~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 318 ----QD-NYLL-LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred ----cc-cHHH-HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 11 1111 112222221 11122233346678999999999999999999999999999999999998886543
No 14
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=9.9e-38 Score=298.47 Aligned_cols=386 Identities=10% Similarity=-0.002 Sum_probs=269.0
Q ss_pred hHHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH---
Q 012626 3 AFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA--- 79 (459)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~--- 79 (459)
.|...|.+|...+...+.+++|+|+++.+.|++.+.+.+++++++++.|+++||+|||+++..+.++++++..+.++
T Consensus 37 ~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 116 (467)
T PRK09556 37 GYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLG 116 (467)
T ss_pred HHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHh
Confidence 35667888888888888899999999999999999999999999999999999999999999988888887776665
Q ss_pred --HHhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc-ccchhHHHHHh
Q 012626 80 --AANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKL-ETWGWRLSLGL 156 (459)
Q Consensus 80 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~-~~~gwr~~f~~ 156 (459)
++|++.+++.|+++|++.+...+...++++||+|+++|+++++++..+.++|.++++++....... ...+||..|.+
T Consensus 117 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~ 196 (467)
T PRK09556 117 SGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIF 196 (467)
T ss_pred cccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHH
Confidence 589999999999999999999999999999999999999999999999999999998884322211 11269999988
Q ss_pred hhHHHHHHHHHH-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHH-----Hhcccch
Q 012626 157 AAAPALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRN-----ILERRNR 230 (459)
Q Consensus 157 ~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 230 (459)
.++++++..+.. ++.+++|+....++ .++ . ..+. ...+ + +..++.+.+..+ .++++.
T Consensus 197 ~g~~~~~~~i~~~~~~~~~p~~~~~~~-~~~---~---~~~~--~~~~-~------~~~~~~~~~~~~~~~~~~l~~~~- 259 (467)
T PRK09556 197 PSIIALIIGFIGLRYGSDSPEELGWGK-AEE---I---FGEP--ISEE-D------KETESTDMTKWQIFVEYVLKNPV- 259 (467)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCCCC-hhh---c---ccCc--cchh-h------hccccccCcHHHHHHHHHHcChH-
Confidence 888877665544 44677763211100 000 0 0000 0000 0 000000111111 233332
Q ss_pred hHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHH
Q 012626 231 PQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMIT 309 (459)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 309 (459)
++...+..++....+.....|.|.++++ +|++..+++.......++.+++.++.|+++||++||+..........+
T Consensus 260 ---~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 260 ---IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALI 336 (467)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 4444444444454556677888988765 899999999999999999999999999999999998876654443333
Q ss_pred HHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHH-HHHHHHH
Q 012626 310 CQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLF-FTFVIAQ 388 (459)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~ 388 (459)
+...+.... ..+........++.+.... +........+.|.+|++.++++.|+.+..+++ |.+++|.
T Consensus 337 ~~~~~~~~~-----------~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~ 404 (467)
T PRK09556 337 IFTLGVYQH-----------ATSEYMYLASLFALGFLVF-GPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKV 404 (467)
T ss_pred HHHHHHHHh-----------cCcHHHHHHHHHHHHHHHh-hHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhh
Confidence 222211110 1112222222222332211 11111124556999999999999999999997 7799999
Q ss_pred HHHHHHh------------hccchhHHHHHHHHHHHHHhheeec
Q 012626 389 IFLTLLC------------SFKFGIFLFFAGWVTIMTIFVYFFL 420 (459)
Q Consensus 389 ~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~ 420 (459)
+.|.+.| ..+|...+.+..++.+++.+..+.+
T Consensus 405 ~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 405 GLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred hHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 4567777766666666665554433
No 15
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2.9e-36 Score=285.59 Aligned_cols=370 Identities=17% Similarity=0.198 Sum_probs=248.7
Q ss_pred HHHhhhhhhhhhhcCCCCCCccc---cCchhHHHHH---HhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCK---YDNQGLAAFT---SSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALN 77 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~~---s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~ 77 (459)
+..+++|+...+...+.+.++++ .+..+.+... +..+++..++++++|+++||+|||+++..+.++++++++++
T Consensus 31 ~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 110 (432)
T PRK10406 31 NLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI 110 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 44577788888887778888874 5555544444 44455555999999999999999999999999999999999
Q ss_pred HHHHhHH--------HHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc-----
Q 012626 78 AAAANLA--------MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK----- 144 (459)
Q Consensus 78 ~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~----- 144 (459)
++++++. .++++|+++|++.|+.++...+++.|++|+++|+++.++...+...|.++++.+......
T Consensus 111 ~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 190 (432)
T PRK10406 111 ACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA 190 (432)
T ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 9988864 699999999999999999999999999999999999999998888888888766322211
Q ss_pred -cccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHH
Q 012626 145 -LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRN 223 (459)
Q Consensus 145 -~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (459)
...+|||++|++.++++++.......+||+|++..+ +.+++.++++
T Consensus 191 ~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~---------------------------------~~~~~~~~~~ 237 (432)
T PRK10406 191 ELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETR---------------------------------ALKEAGSLKG 237 (432)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHh---------------------------------hhcccccHHH
Confidence 125699999999888887766655667887742100 0001224556
Q ss_pred HhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhh
Q 012626 224 ILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLIS 302 (459)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 302 (459)
+++++. .+.......+.....++.+..|.|.++++ +|++..+.+.......+...++..+.|+++||++||+.+..
T Consensus 238 l~~~~~---~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~ 314 (432)
T PRK10406 238 LWRNRR---AFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLC 314 (432)
T ss_pred HHhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH
Confidence 665332 22222222222233445566778887755 89988888888888888888888999999999999988766
Q ss_pred hhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHH-
Q 012626 303 GGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLF- 381 (459)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~- 381 (459)
......+....+..... ........+....+.....+. ..+..+.+.+|.+|++.|+++.|+.+..+++
T Consensus 315 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~ 384 (432)
T PRK10406 315 FGSLAALFTVPILSALQ---------NVSSPYAAFGLVMCALLIVSF-YTSISGILKAEMFPAQVRALGVGLSYAVANAL 384 (432)
T ss_pred HHHHHHHHHHHHHHHHH---------cCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCccchhhhHHHHHHHHH
Confidence 55443332221111110 001112111112111122221 1223357778999999999999999988775
Q ss_pred HHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHhheeec
Q 012626 382 FTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMTIFVYFFL 420 (459)
Q Consensus 382 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~ 420 (459)
.+...|.+.+.+ +..+ +...+.+.++..+++.+..+++
T Consensus 385 ~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 385 FGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 344567777744 5445 4444555555555554444443
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.5e-36 Score=284.82 Aligned_cols=365 Identities=16% Similarity=0.112 Sum_probs=267.4
Q ss_pred hhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 012626 7 KFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAML 86 (459)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (459)
++++........+.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.++++++++++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (406)
T PRK11551 27 EGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSL 106 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34455666667777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHH
Q 012626 87 LTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTV 166 (459)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~ 166 (459)
++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+ .....+..+||+.|++.++..++..+
T Consensus 107 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 107 LVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVI--GVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHccccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988 44555667899999998876665554
Q ss_pred H-HhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhh
Q 012626 167 G-GILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQIL 245 (459)
Q Consensus 167 ~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (459)
. ..++||+|++..++++.++. +...+..++.+..++. .......+...
T Consensus 185 ~~~~~l~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 233 (406)
T PRK11551 185 LLMRWLPESRAFAQAAGAGKQR------------------------------APVLRALFGEGRATAT-LLLWISYFFTL 233 (406)
T ss_pred HHHHhCCCChhHHhccCcchhh------------------------------hhhHHHHhhhhhhhHH-HHHHHHHHHHH
Confidence 3 45579987543221110000 0001111111111111 11112222222
Q ss_pred cchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 246 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
........+.|.++++.|+++.+.+.......++.+++.++.|++.||++||+.+..+.....++...+...
T Consensus 234 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------- 305 (406)
T PRK11551 234 IVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA-------- 305 (406)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 334556667888888899999999999999999999999999999999999998877555544444333221
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLF 404 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~ 404 (459)
+..+.......+.+.+.. +..+....+..|.+|++.|+++.|+.+....++..++|.+.|.+.++.+ +...+.
T Consensus 306 -----~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~ 379 (406)
T PRK11551 306 -----PSFAGMLLAGFAAGLFVV-GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIG 379 (406)
T ss_pred -----CcHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHH
Confidence 112222233333333333 2334446788899999999999999999999999999999999998754 444444
Q ss_pred HHHHHHHHHHhhee
Q 012626 405 FAGWVTIMTIFVYF 418 (459)
Q Consensus 405 ~~~~~~l~~~~~~~ 418 (459)
....+.+.+.++.+
T Consensus 380 ~~~~~~~~~~~~~~ 393 (406)
T PRK11551 380 ASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444444433
No 17
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=7.2e-36 Score=282.16 Aligned_cols=376 Identities=15% Similarity=0.129 Sum_probs=262.5
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhH
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL 83 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
+..+++++...+...+.+++++|+++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++++++++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 100 (405)
T TIGR00891 21 WLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGY 100 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccH
Confidence 44555667777777788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHH
Q 012626 84 AMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALM 163 (459)
Q Consensus 84 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~ 163 (459)
+.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.........+||+.|++.++..++
T Consensus 101 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~ 180 (405)
T TIGR00891 101 ITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIF 180 (405)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999884333222223599999987777666
Q ss_pred HHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHh
Q 012626 164 MTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQ 243 (459)
Q Consensus 164 ~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (459)
..+....+||++++...+++.++..+..++..+.... .+ ...++.....++. ....+..+.........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 249 (405)
T TIGR00891 181 ALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHR---IA------NIVMTLAAAMVQS--AGKRWPTFVYLVVLVLF 249 (405)
T ss_pred HHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchh---hh------hhhhhhhHHhhhh--hhhhhHHHHHHHHHHHH
Confidence 6666666899876543322222111111111110000 00 0000000011111 11111112222222222
Q ss_pred hhcchHHHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhcc
Q 012626 244 ILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 322 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (459)
..........+.|.++. ++|++..+.+.......++.+++.++.+++.||++||+.+..+.....+........
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----- 324 (405)
T TIGR00891 250 ANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAI----- 324 (405)
T ss_pred HHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHh-----
Confidence 22222344455666655 489999999999999999999999999999999999998877665443322222111
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chh
Q 012626 323 GPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGI 401 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 401 (459)
....+.......+.+.+.. ...+....++.|.+|++.|+++.|+.+.+.+++..++|.+.|.+.|+.+ |..
T Consensus 325 -------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~ 396 (405)
T TIGR00891 325 -------GANVAVLGLGLFFQQMLVQ-GIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGT 396 (405)
T ss_pred -------CCchHHHHHHHHHHHHHHc-cchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 0112222222233333333 2233445777899999999999999999999999999999999999988 654
Q ss_pred HH
Q 012626 402 FL 403 (459)
Q Consensus 402 ~~ 403 (459)
.+
T Consensus 397 ~~ 398 (405)
T TIGR00891 397 AL 398 (405)
T ss_pred hH
Confidence 33
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=4e-36 Score=284.64 Aligned_cols=380 Identities=12% Similarity=0.058 Sum_probs=262.3
Q ss_pred HhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHH
Q 012626 6 KKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAM 85 (459)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
..++++.......+.+.+++|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+++++++|++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (434)
T PRK11663 34 LFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWA 113 (434)
T ss_pred HHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHH
Confidence 34455555566677788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHH
Q 012626 86 LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT 165 (459)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~ 165 (459)
+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|.++++.+ .....+..|||+.|++.+++.++..
T Consensus 114 l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~--~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 114 FALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLV--VGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHcccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988 4445566799999999888766554
Q ss_pred H-HHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcc-cchhHHHHHHHHHHHh
Q 012626 166 V-GGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILER-RNRPQLVMAIFMPMFQ 243 (459)
Q Consensus 166 ~-~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 243 (459)
+ ..+++||+|++...+...+..+ + . .+.. ++.+..+.+.++.++. ..+.+.++...+..+.
T Consensus 192 ~~~~~~~~~~p~~~~~~~~~~~~~----------~---~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (434)
T PRK11663 192 LFLCWRLRDKPQAMGLPSVGEWRH----------D---A-LELA---QQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVL 254 (434)
T ss_pred HHHHHHcCCCHhhcCCCCcccccc----------c---c-cccc---hhccccCCChhhhHHHHHhcChHHHHHHHHHHH
Confidence 4 4455788875321111000000 0 0 0000 0000011122222211 1111223333333444
Q ss_pred hhcchHHHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--CCchhhh-hhhHHHHHHHHHHHHHHh
Q 012626 244 ILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKL--GRRALLI-SGGIQMITCQVIVSIILG 319 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~-~~~~~~~~~~~~~~~~~~ 319 (459)
.......+..|.|.+++ ++|++..+++.......++.+++.++.|++.||+ ++|+... .......+....+....
T Consensus 255 ~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~- 333 (434)
T PRK11663 255 VYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP- 333 (434)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-
Confidence 44445566778888875 4899999999999999999999999999999998 3333322 22222221211111110
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 399 (459)
..............+.+ ...........+.|.+|++.|+++.|+.+...++|.+++|.+.|.+.|+.++
T Consensus 334 ----------~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~ 402 (434)
T PRK11663 334 ----------FASYVMQAACFFTIGFF-VFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHW 402 (434)
T ss_pred ----------cccHHHHHHHHHHHHHH-HhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhccc
Confidence 01111111111222211 1111112234567999999999999999999999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHhh
Q 012626 400 GIFLFFAGWVTIMTIFV 416 (459)
Q Consensus 400 ~~~~~~~~~~~l~~~~~ 416 (459)
...+...+++.+++.+.
T Consensus 403 ~~~f~~~~~~~~~~~~~ 419 (434)
T PRK11663 403 TGFFVVISIAAGISALL 419 (434)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777766665554443
No 19
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.7e-35 Score=280.35 Aligned_cols=378 Identities=14% Similarity=0.151 Sum_probs=250.3
Q ss_pred HHHhhhhhhhhhhcCC-CCCCcc--ccCchhHHHHH-----HhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHH
Q 012626 4 FLKKFFHDVYLKKKHA-HENNYC--KYDNQGLAAFT-----SSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAA 75 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~~~--~~s~~~~~~~~-----s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~ 75 (459)
+..|++|........+ ...+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++..+.++++++++
T Consensus 31 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 109 (438)
T PRK09952 31 AVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATA 109 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 3445666655554333 223333 55655 45553 345567789999999999999999999999999999999
Q ss_pred HHHHHHhHH--------HHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc---
Q 012626 76 LNAAAANLA--------MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK--- 144 (459)
Q Consensus 76 ~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~--- 144 (459)
++++++|++ .++++|+++|++.|..++....++.|++|+++|++..+....+..+|.+++..+......
T Consensus 110 ~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~ 189 (438)
T PRK09952 110 LIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTT 189 (438)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999987 588999999999999999999999999999999999999999999999988766322211
Q ss_pred ---cccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCch
Q 012626 145 ---LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPF 221 (459)
Q Consensus 145 ---~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (459)
...+|||++|++.+++.++........||+|+|...+++.++ .+.+.+.
T Consensus 190 ~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~----------------------------~~~~~~~ 241 (438)
T PRK09952 190 DEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA----------------------------AKKRIPV 241 (438)
T ss_pred HHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccc----------------------------ccccCCH
Confidence 134699999999888776655555567898865422211000 0001112
Q ss_pred HH-HhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchh
Q 012626 222 RN-ILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRAL 299 (459)
Q Consensus 222 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 299 (459)
.+ .+++++ .+.......+......+....+.|.+.++ +|++...........++..+++.++.|+++||++||+.
T Consensus 242 ~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~ 318 (438)
T PRK09952 242 IEALLRHPG---AFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRV 318 (438)
T ss_pred HHHHHHchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH
Confidence 22 222222 12222222222233344556677777654 78877655555556677778888999999999999998
Q ss_pred hhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHH
Q 012626 300 LISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVN 379 (459)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 379 (459)
+..+.....++...+..... ..+..+..+....+.+.+.+... +..+++++|.+|++.|+++.|+.+..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~e~~p~~~r~tg~g~~~~~~ 388 (438)
T PRK09952 319 YITGALIGTLSAFPFFMALE---------AQSIFWIVFFSIMLANIAHDMVV-CVQQPMFTEMFGASYRYSGAGVGYQVA 388 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH---------cCChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCcchhHHHHhHHHHHH
Confidence 87765554443332222110 01112222222233333333332 334678899999999999999977765
Q ss_pred H-HHHHHHHHHHHHHHhhc--cchhHHHHHHHHHHHHHhheeeccCC
Q 012626 380 L-FFTFVIAQIFLTLLCSF--KFGIFLFFAGWVTIMTIFVYFFLPET 423 (459)
Q Consensus 380 ~-~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~ 423 (459)
. +++.++|.+.+.+.+.. +|...+.+.+++.+++.+..+..+++
T Consensus 389 ~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 389 SVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 5 89999999999998854 35555666666666666665555553
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=4.1e-36 Score=276.15 Aligned_cols=324 Identities=13% Similarity=0.048 Sum_probs=224.7
Q ss_pred cCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 012626 17 KHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVG 96 (459)
Q Consensus 17 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (459)
..+.+++|+|+|+.+.|++.+.+++++.+++++.|+++||+|||+++..+......+.+.....+|++.+++.|+++|++
T Consensus 13 ~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g 92 (368)
T TIGR00903 13 VLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALG 92 (368)
T ss_pred hHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhH
Confidence 44556788999999999999999999999999999999999999987666555544443333337999999999999999
Q ss_pred ccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHH-HhccCCCh
Q 012626 97 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG-GILLPETP 175 (459)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~e~p 175 (459)
.+. .+.....++|++|+++|++++++...+..+|.++++++ +....+..|||+.|++.++++++..+. .+++||+|
T Consensus 93 ~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~--~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 93 QPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAA--GLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred hHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 986 56666777999999999999999999999999999988 455556779999999988887766554 45689988
Q ss_pred HHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhH
Q 012626 176 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 255 (459)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (459)
++.. +.. + ..+ . .++++++++++. ++...+..++....+..+..|.
T Consensus 170 ~~~~---~~~---------------~--~~~---~-------~~~~~~ll~~~~----~~~~~~~~~~~~~~~~~~~~wl 215 (368)
T TIGR00903 170 FQAA---EGF---------------G--FKD---A-------VKEFGALAGRKD----LWIIGAILGFGVALFDNLAIWL 215 (368)
T ss_pred CCCC---CCc---------------c--hHH---H-------HHHHHHHHcChh----HHHHHHHHHHHHHHHHHHHHHH
Confidence 5321 000 0 000 0 012456666544 3445555556666677888899
Q ss_pred HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCc---hhhhh-hhHHHHHHHHHHHHHHhhccCCCccccch
Q 012626 256 PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR---ALLIS-GGIQMITCQVIVSIILGLKFGPNQELSKS 331 (459)
Q Consensus 256 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (459)
|.++++.|++.. .+.......+.+.++ .++++||..|| +.... .....++....+... .
T Consensus 216 p~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~-------------~ 278 (368)
T TIGR00903 216 EAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFE-------------L 278 (368)
T ss_pred HHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHc-------------c
Confidence 999988888754 455555545444444 57788887654 22222 222222222121111 1
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 332 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
.....+....+.+++.... .+..+.+.+|.+|++.|+++.|+.+..+++++..+|.+.+.+..
T Consensus 279 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~ 341 (368)
T TIGR00903 279 NRLALFAFIGIAGLLMLPA-YAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS 341 (368)
T ss_pred ccHHHHHHHHHHHHhhhhh-HHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 1122222233333333222 23346788999999999999999999999999999999988773
No 21
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.3e-35 Score=277.91 Aligned_cols=347 Identities=12% Similarity=0.071 Sum_probs=255.2
Q ss_pred hcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 012626 16 KKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGV 95 (459)
Q Consensus 16 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (459)
...+.+.+++|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++..++++++++++|++.++++|+++|+
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 109 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAF 109 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 34577889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCC
Q 012626 96 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPET 174 (459)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~ 174 (459)
+.+...+...+++.|++|+++|++++++...+.++|.+++|++ .....+..|||+.|++.++++++..+.. .++||.
T Consensus 110 ~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l--~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 110 AHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPL--GRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhH--HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9998889999999999999999999999999999999999999 4445566799999999988877665544 446665
Q ss_pred hHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHh
Q 012626 175 PNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY 254 (459)
Q Consensus 175 p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (459)
|+ ++.+ ..+..++.+|++..+....... .... .......+
T Consensus 188 ~~-----~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~ 227 (390)
T PRK03545 188 PS-----EHSG-------------------------------SLKSLPLLFRRPALVSLYLLTV---VVVT-AHFTAYSY 227 (390)
T ss_pred CC-----CCcc-------------------------------hHHHHHHHHhCcHHHHHHHHHH---HHHH-HHHHHHHH
Confidence 41 0000 0011234444443222222111 1111 22223344
Q ss_pred HHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhh
Q 012626 255 APVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 333 (459)
Q Consensus 255 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (459)
.+.+.++ .|.+..+.+.......++.+++.++.+++.||.++|... .+......+...+.... ++.
T Consensus 228 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~------------~~~ 294 (390)
T PRK03545 228 IEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA------------NSE 294 (390)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh------------chH
Confidence 4545454 799999999999999999999999999999999987643 33333333333222211 122
Q ss_pred hHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 012626 334 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMT 413 (459)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 413 (459)
+.......+.+.+.. ...+.....+.+..| +.|++++|+.+...++|..++|.+.|.+.|+.++...+...+.+.+.+
T Consensus 295 ~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~ 372 (390)
T PRK03545 295 WHLSVLSIFWGIAIM-CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAA 372 (390)
T ss_pred HHHHHHHHHHHHHHh-cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHH
Confidence 333333344444332 222333455667766 678999999999999999999999999999999877777777666666
Q ss_pred Hhheee
Q 012626 414 IFVYFF 419 (459)
Q Consensus 414 ~~~~~~ 419 (459)
.+....
T Consensus 373 ~~~~~~ 378 (390)
T PRK03545 373 LVWSIL 378 (390)
T ss_pred HHHHHH
Confidence 555433
No 22
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2.3e-35 Score=275.78 Aligned_cols=356 Identities=13% Similarity=0.050 Sum_probs=257.5
Q ss_pred hhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 012626 14 LKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILL 93 (459)
Q Consensus 14 ~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 93 (459)
.+...|.+++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++++++|++.+++.|+++
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~ 107 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLG 107 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHH
Confidence 44566778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHhhhHHHHHHHHHHhcc-
Q 012626 94 GVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILL- 171 (459)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~-~gwr~~f~~~~~~~~~~~~~~~~~- 171 (459)
|++.+...+....++.|++| ++|+++++++..+..+|..+++.++ ....+. .+||+.+.+.++..++..+..+..
T Consensus 108 Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~--~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 108 GVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAIT--PWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999997 7899999999999999999998883 333343 379998877666655443333322
Q ss_pred CCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHH
Q 012626 172 PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSI 251 (459)
Q Consensus 172 ~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (459)
++.|+ . + +++ +...++.++++. .+...+..+.....+...
T Consensus 185 ~~~~~-------~-~---------------------------~~~-~~~~~~~l~~~~----~~~l~~~~~~~~~~~~~~ 224 (393)
T PRK09705 185 AREVA-------S-S---------------------------HKT-TTTPVRVVFTPR----AWTLGVYFGLINGGYASL 224 (393)
T ss_pred cCCCc-------c-c---------------------------cCC-CcCCcccccCHh----HHHHHHHHHHHHHHHHHH
Confidence 22220 0 0 000 001112222222 222222333334455667
Q ss_pred HHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccch
Q 012626 252 LFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKS 331 (459)
Q Consensus 252 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (459)
..+.|.+++++|.+..+++......+++.++++++.+++.||.+||+....+..+..++...+.... ..
T Consensus 225 ~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~-----------~~ 293 (393)
T PRK09705 225 IAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP-----------LQ 293 (393)
T ss_pred HHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc-----------ch
Confidence 7788888888999999999999999999999999999999999999888877666655554433221 11
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccccccccC-ChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHH
Q 012626 332 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIF-PLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWV 409 (459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 409 (459)
.... ...+.+.+.+.... .......+.. |++.+++..|+.+..+++++.++|.+.|++.|..+ +...+.+..++
T Consensus 294 -~~~~--~~~l~g~g~g~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~ 369 (393)
T PRK09705 294 -LPVL--WAMVCGLGLGGAFP-LCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALC 369 (393)
T ss_pred -HHHH--HHHHHHHhccchHH-HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 1111 12223333333322 2233444555 56789999999999999999999999999999876 56655555554
Q ss_pred HHHHHhh-eeeccCCCCCC
Q 012626 410 TIMTIFV-YFFLPETKGVP 427 (459)
Q Consensus 410 ~l~~~~~-~~~~~~~~~~~ 427 (459)
.+...++ ..+.||++++.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 370 VVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHHHhccccccch
Confidence 4444433 45566666554
No 23
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.1e-35 Score=251.78 Aligned_cols=396 Identities=17% Similarity=0.160 Sum_probs=297.2
Q ss_pred hhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 012626 13 YLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRIL 92 (459)
Q Consensus 13 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 92 (459)
+++...+.+++.+|.+..|..++......|..+++..+|..+|++|||+.+....+..++...+.+.++|+..+.+.|.+
T Consensus 96 ~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l 175 (528)
T KOG0253|consen 96 LLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRAL 175 (528)
T ss_pred HHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHH
Confidence 44456666788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccC
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLP 172 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (459)
.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.++...++ .......||||..+..+.+..+.....+++|
T Consensus 176 ~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~la--w~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ 251 (528)
T KOG0253|consen 176 WGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLA--WGVMSNFGWRYLLFTSSTPLMFAARFLVWVY 251 (528)
T ss_pred HhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHH--HHHHHhhhHHHHHHHHHhHHHHHHHHHhhcc
Confidence 9999999 899999999999999999887777 89999999999984 4445567999999998888777788888899
Q ss_pred CChHHHHhhCcHHHHHHHHHHHhCCCcccHHH------------HHHHHHH----HhhcccCCchHHHhcccchhHHHHH
Q 012626 173 ETPNSLIERGKKVEGRRVLEKIRGTKEVNAEY------------QDMVDAS----ELANSIKHPFRNILERRNRPQLVMA 236 (459)
Q Consensus 173 e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (459)
||||++..+++++++...++++...|+.+... ++..+.+ +..++.+....+++..+.++..+..
T Consensus 252 ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlll 331 (528)
T KOG0253|consen 252 ESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLL 331 (528)
T ss_pred cCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHH
Confidence 99999999999999999999887665322111 1100000 1112234455667755555555544
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHhc---C-----------------CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 012626 237 IFMPMFQILTGINSILFYAPVLFQSM---G-----------------FKGDASLYSSAMTGAVLASSTLISIATVDKLGR 296 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~---g-----------------~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 296 (459)
..+.+...+. ++........+.+.. + .+......-.....+....|.++.+++.||+||
T Consensus 332 w~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGR 410 (528)
T KOG0253|consen 332 WRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGR 410 (528)
T ss_pred HHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcc
Confidence 4444433333 333333333333221 1 112233445667788999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHH
Q 012626 297 RALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITV 376 (459)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 376 (459)
|+.+....+...++.+.+.... ......+..+..-++...++... +.|..|++|+..|+++.|.++
T Consensus 411 KkTMal~l~~f~iflfll~~c~-------------~rn~~tvllf~arafisg~fqva-YvYtPEVyPTavRatgvGtcS 476 (528)
T KOG0253|consen 411 KKTMALSLILFGIFLFLLTTCK-------------TRNAYTVLLFTARAFISGAFQVA-YVYTPEVYPTAVRATGVGTCS 476 (528)
T ss_pred hhHHHHHHHHHHHHHHHHHHhc-------------CcchhHHHHHHHHHHHhchheEE-EEecCcccchhhhhcchhhhh
Confidence 9999998888887777666542 12233444455555555555544 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhheeeccCCCCCCH
Q 012626 377 AVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPI 428 (459)
Q Consensus 377 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 428 (459)
..+++|+++.|.+. ...+...+...+++.+++++.++...++-.|+|+|..
T Consensus 477 smaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 477 SMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred hHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 99999999999998 4444444556666666666666666666668888753
No 24
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.1e-35 Score=280.16 Aligned_cols=388 Identities=14% Similarity=0.147 Sum_probs=273.9
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhH
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL 83 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
|..+|+++...+...+.+++++|+++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 45677777777877788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHH
Q 012626 84 AMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALM 163 (459)
Q Consensus 84 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~ 163 (459)
+.+++.|++.|++.+...+...+++.|++|+++|++++++.....++|.++++.+ .....+..+||+.|++.+++.++
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPL--VGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHH--HHHHHHhCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 44445566899999998888777
Q ss_pred HHHHHh-ccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHH
Q 012626 164 MTVGGI-LLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMF 242 (459)
Q Consensus 164 ~~~~~~-~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (459)
..+..+ +.||+|+..... ++++.....++...+ .+..+.++..+...++.++++. ++...+..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 225 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWL-TEEEKYIVVGGLLAE----------QQGKGPSTPKKYQIKELLKDRR----VWGLALGQF 225 (399)
T ss_pred HHHHhhheecCCCCccccC-CHHHHhhcchhhccc----------cccccccCCCccchHHHhcCHH----HHHHHHHHH
Confidence 665544 466665311100 111100000000000 0000111112233444554433 333344444
Q ss_pred hhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhh-hHHHHHHHHHHHHHHhh
Q 012626 243 QILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISG-GIQMITCQVIVSIILGL 320 (459)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 320 (459)
...........+.|.++++ .|.++.+.+.......++.+++.++.+++.||++||+..... .....++.+........
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (399)
T TIGR00893 226 LVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFA 305 (399)
T ss_pred HHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 4455556677777877765 899888999999999999999999999999999998622111 11111111111111000
Q ss_pred ccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-c
Q 012626 321 KFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-F 399 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~ 399 (459)
. . .....+.... ....... ..+..+..+.+..|.+|++.|+++.|+.+.+..++..++|.+.|.+.+..+ +
T Consensus 306 ~--~----~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~ 377 (399)
T TIGR00893 306 T--N----YVNIPYAALA-LVALGFF-GLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSF 377 (399)
T ss_pred h--c----cchhHHHHHH-HHHHHHh-chhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCch
Confidence 0 0 0111222222 2222222 222456667888999999999999999999999999999999999999888 7
Q ss_pred hhHHHHHHHHHHHHHhh
Q 012626 400 GIFLFFAGWVTIMTIFV 416 (459)
Q Consensus 400 ~~~~~~~~~~~l~~~~~ 416 (459)
...+...++..+++.+.
T Consensus 378 ~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 378 AGALMVVAALALIGALS 394 (399)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 66666665555544443
No 25
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5.1e-35 Score=283.27 Aligned_cols=386 Identities=15% Similarity=0.154 Sum_probs=260.5
Q ss_pred HhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHH
Q 012626 6 KKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAM 85 (459)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
.+.++........+.+.+++|+|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.
T Consensus 31 ~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (496)
T PRK03893 31 LDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWT 110 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 34455556666667788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHH
Q 012626 86 LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT 165 (459)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~ 165 (459)
+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+ .....+..+||+.|++.++..++..
T Consensus 111 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~~w~~~f~~~~~~~~~~~ 188 (496)
T PRK03893 111 LFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQV--YSLVVPVWGWRALFFIGILPIIFAL 188 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 4555667799999988665555444
Q ss_pred HHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHH----HH-HHhhcccCCchH-------------HH-h-
Q 012626 166 VGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMV----DA-SELANSIKHPFR-------------NI-L- 225 (459)
Q Consensus 166 ~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~-------------~~-~- 225 (459)
+....+||++++..++++.++.++..+.....+.......... .. ..........+. .. .
T Consensus 189 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (496)
T PRK03893 189 WLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQ 268 (496)
T ss_pred HHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 4445578877553322221111111111100000000000000 00 000000000000 00 0
Q ss_pred cccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhh
Q 012626 226 ERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGG 304 (459)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 304 (459)
.....++.........+...........+.|.+++ ++|++..+.+.......++.+++.++.|++.||++||+.+..+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~ 348 (496)
T PRK03893 269 SSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSL 348 (496)
T ss_pred hcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 00111111122222222222222234567788875 68999999999999999999999999999999999999877665
Q ss_pred HHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHH
Q 012626 305 IQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTF 384 (459)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 384 (459)
....+..+.+... .....+ ......+...+.+.+..+....++.|.+|++.|++++|+.+....+|+.
T Consensus 349 ~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 416 (496)
T PRK03893 349 LISQLLIIPVFAI-----------GGANVW-VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGA 416 (496)
T ss_pred HHHHHHHHHHhhc-----------cccHHH-HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHH
Confidence 5444433322221 011111 2222222222222233344456778999999999999999999999999
Q ss_pred HHHHHHHHHHhhccchhHHHH
Q 012626 385 VIAQIFLTLLCSFKFGIFLFF 405 (459)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~ 405 (459)
++|.+.|.+.+..++...+..
T Consensus 417 lgp~l~g~l~~~~g~~~~~~~ 437 (496)
T PRK03893 417 LAPILGALIAQRLDLGTALAS 437 (496)
T ss_pred HHHHHHHHHhccCChHHHHHH
Confidence 999999999999887655433
No 26
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=7.9e-35 Score=276.00 Aligned_cols=352 Identities=19% Similarity=0.218 Sum_probs=239.2
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchhHHHHH-HhHH-----HHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFT-SSLY-----LAGLVASFVASPVTRDYGRRASIICGGISFLLGAALN 77 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-s~~~-----l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~ 77 (459)
.+.+|+|+...+...+.+.+|++.++.+.+.+. +... ++..+++++.|+++||+|||+.++.+.+++.++++++
T Consensus 24 ~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~ 103 (434)
T PRK15075 24 NFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLI 103 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH
Confidence 456788999999989999999999888876543 3322 2334788999999999999999999999999999999
Q ss_pred HHHHhHH--------HHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc-----
Q 012626 78 AAAANLA--------MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK----- 144 (459)
Q Consensus 78 ~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~----- 144 (459)
+++++++ .++++|+++|++.+...+....+++|++|+++|++++++...+.++|..+++.++.....
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~ 183 (434)
T PRK15075 104 AFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPA 183 (434)
T ss_pred HhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 9999987 468999999999999999999999999999999999999999888888887776433211
Q ss_pred -cccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHH
Q 012626 145 -LETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRN 223 (459)
Q Consensus 145 -~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (459)
.+..|||++|++..+...+........||++++..+++ +.+.+..+++
T Consensus 184 ~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~-------------------------------~~~~~~~~~~ 232 (434)
T PRK15075 184 QMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH-------------------------------RPSMREIFRS 232 (434)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh-------------------------------ccccccHHHH
Confidence 24579999999865443322222223444432110000 0000111112
Q ss_pred HhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhh
Q 012626 224 ILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLIS 302 (459)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 302 (459)
..++ ++.........+.....+.....|.|.++++ +|++..+.++......++.+++.++.|+++||++||+.+..
T Consensus 233 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~ 309 (434)
T PRK15075 233 LAAN---WRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIA 309 (434)
T ss_pred HHHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 2211 1122222222233344456677888988876 89998888888888899999999999999999999998776
Q ss_pred hhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHH-
Q 012626 303 GGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLF- 381 (459)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~- 381 (459)
+.....+.......... .............+.+.+.+ ...+..+.+..|.+|++.|+++.|+.+.++..
T Consensus 310 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~ 379 (434)
T PRK15075 310 FTVLAILTAYPALSWLV---------AAPSFARMLAVELWLSFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAYSLATAI 379 (434)
T ss_pred HHHHHHHHHHHHHHHHH---------cCCchHHHHHHHHHHHHHHH-HHHhhHHHHHHHHCCCCccchheeHHHHHHHHH
Confidence 54443322111111100 00111111121222223333 22233346778999999999999997666654
Q ss_pred HHHHHHHHHHHHHhhccc
Q 012626 382 FTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 382 g~~~~~~~~~~~~~~~~~ 399 (459)
++.++|.+.+.+.|..++
T Consensus 380 ~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 380 FGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HhhhHHHHHHHHHHhcCC
Confidence 588899999999998875
No 27
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=5.6e-35 Score=273.35 Aligned_cols=356 Identities=17% Similarity=0.120 Sum_probs=260.0
Q ss_pred hhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 012626 11 DVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGR 90 (459)
Q Consensus 11 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 90 (459)
+...+...+.+++++|+|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY 98 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445567778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHh-
Q 012626 91 ILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI- 169 (459)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~- 169 (459)
++.|++.+...+.....+.|++| ++|+++.++...+.++|..+++++ .....+..+||+.|++.++++++..+..+
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 99 GLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPL--ITSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHH--HHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888999997 579999999999999998876666 33334456899999999988877765554
Q ss_pred ccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchH
Q 012626 170 LLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGIN 249 (459)
Q Consensus 170 ~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (459)
+++|+|+.. .++ +++. ++++...++.++++..+... +..+.......
T Consensus 176 ~~~~~~~~~-~~~--------------~~~~--------------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 222 (377)
T TIGR00890 176 LIGYPPGQL-IKT--------------NIEV--------------SVKDYTVWEMLRTPQFWVLY----LSFFLNAVSGL 222 (377)
T ss_pred heecCchhc-ccc--------------Cccc--------------chhhhhHHHHHcCccHHHHH----HHHHHHhHHHH
Confidence 455543110 000 0000 00011223444444322222 22222222223
Q ss_pred HHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcccc
Q 012626 250 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 329 (459)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (459)
....+.+.+.++.|.+..+.+.......++.++++++.+++.||++||+.+..+.....++.+.+....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----------- 291 (377)
T TIGR00890 223 LLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP----------- 291 (377)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc-----------
Confidence 333445556677888888888889999999999999999999999999998877776666655544321
Q ss_pred chhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 012626 330 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 409 (459)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (459)
............+.+...+... +....++.|.+|+++|+++.|+.+....+|..++|.+.|.+.+..++...+...+++
T Consensus 292 ~~~~~~~~~~~~~~g~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~ 370 (377)
T TIGR00890 292 MLNDVLFLATVALVFFTWGGTI-SLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAF 370 (377)
T ss_pred cchhHHHHHHHHHHHHHhccch-hccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHH
Confidence 1112222222333333333332 333467789999999999999999999999999999999999999888777776666
Q ss_pred HHHHH
Q 012626 410 TIMTI 414 (459)
Q Consensus 410 ~l~~~ 414 (459)
.++++
T Consensus 371 ~~~~~ 375 (377)
T TIGR00890 371 ALTSL 375 (377)
T ss_pred HHHhc
Confidence 55543
No 28
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=6.5e-34 Score=271.04 Aligned_cols=379 Identities=13% Similarity=0.052 Sum_probs=251.6
Q ss_pred hhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH----hHHHHHHHH
Q 012626 15 KKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA----NLAMLLTGR 90 (459)
Q Consensus 15 ~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r 90 (459)
....+.++++ |+|+.+.+++.+.+.+++++++++.|+++||+|||+++..+.++.+++.+++++++ +++.+++.|
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLL 127 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHH
Confidence 3445566677 99999999999999999999999999999999999999999999999999888764 788899999
Q ss_pred HHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHH-HHHHHhhhhhccccchhHHHHHhhhHHHHHHHH-HH
Q 012626 91 ILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIF-TANMINYGTQKLETWGWRLSLGLAAAPALMMTV-GG 168 (459)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~-~~ 168 (459)
++.|++.+...+.....+.|++|+++|++++++++.+.++|.. .++++..... ...+||+.|++.+++.++..+ ..
T Consensus 128 ~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 128 FLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA--WFNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888999999999999999999999999864 4554422222 223899999998887776544 44
Q ss_pred hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHH-----HhcccchhHHHHHHHHHHHh
Q 012626 169 ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRN-----ILERRNRPQLVMAIFMPMFQ 243 (459)
Q Consensus 169 ~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 243 (459)
+++||+|+....+++ ++.++ +..+ + .+.++.++.+.++ .+|++. ++...+..+.
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~------~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~ 264 (452)
T PRK11273 206 AMMRDTPQSCGLPPI-EEYKN------DYPD---D-------YNEKHEQELTAKQIFMQYVLPNKL----LWYIAIANVF 264 (452)
T ss_pred HHccCCHhhcCCCCh-hhhhh------cccc---c-------cccccCCCccHHHHHHHHHHcChH----HHHHHHHHHH
Confidence 667888753211111 11000 0000 0 0000001112222 222222 3333343333
Q ss_pred hhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--CCchhhhhh-hHHHHHHHHHHHHHHh
Q 012626 244 ILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKL--GRRALLISG-GIQMITCQVIVSIILG 319 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~~~-~~~~~~~~~~~~~~~~ 319 (459)
..........+.|.++++ .|++..+++.......++.+++.++.|+++||+ +||+..... .....++...+...
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~-- 342 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN-- 342 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh--
Confidence 334445667788888876 789988888888888999999999999999999 444432221 11122222111111
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHH-HHHHHHHHHhhcc
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFV-IAQIFLTLLCSFK 398 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~~~~~~~~~~~~~ 398 (459)
...+.+.........+.... ........+..|.+|++.|+++.|+.+...++|+.+ +|.+.|.+.|+.+
T Consensus 343 ---------~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g 412 (452)
T PRK11273 343 ---------PAGNPTVDMACMIVIGFLIY-GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 412 (452)
T ss_pred ---------cccChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc
Confidence 01111222222222222211 111122345579999999999999999999998765 7999999999999
Q ss_pred chhHHHHHHHHHHHHHhheeeccCCCCCCHH
Q 012626 399 FGIFLFFAGWVTIMTIFVYFFLPETKGVPIE 429 (459)
Q Consensus 399 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 429 (459)
+...+...+.+.+++++....+.+.++|+.+
T Consensus 413 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (452)
T PRK11273 413 WDGGFMVMIGGSILAVILLIVVMIGEKRHHE 443 (452)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccccchHH
Confidence 8777766666666665555555444444433
No 29
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=5.5e-34 Score=273.21 Aligned_cols=388 Identities=14% Similarity=0.095 Sum_probs=266.5
Q ss_pred HHHhhhhhhhhhhcCCCCCC----------------------ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchh
Q 012626 4 FLKKFFHDVYLKKKHAHENN----------------------YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRA 61 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~ 61 (459)
+..+|.||...+...+.+++ |++++..+.|++.+.+.+++.+++++.|+++||+|||+
T Consensus 28 ~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~ 107 (465)
T TIGR00894 28 NVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKW 107 (465)
T ss_pred HHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcch
Confidence 34567777777655544433 78999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHh
Q 012626 62 SIICGGISFLLGAALNAAA--ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 139 (459)
++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|.++++++
T Consensus 108 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l- 186 (465)
T TIGR00894 108 SIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPI- 186 (465)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999887654 5688999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccc-chhHHHHHhhhHHHHHHHHHHhc-cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhccc
Q 012626 140 YGTQKLET-WGWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSI 217 (459)
Q Consensus 140 ~~~~~~~~-~gwr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (459)
.....+. .|||+.|++.++++++..+.+++ .+|+|+.... .++++. +..++. .++.+.+.+.
T Consensus 187 -~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~-~~i~~~-------------~~~~~~~~~~ 250 (465)
T TIGR00894 187 -SGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC-ISKFEK-KYINSS-------------LQGQKGSTRQ 250 (465)
T ss_pred -HHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC-CCHHHH-HHHHhh-------------cccccCCCCC
Confidence 4444555 48999999999988777666544 5677632111 111111 000000 0000001112
Q ss_pred CCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 012626 218 KHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGR 296 (459)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 296 (459)
+.++++.++++. ++...+..+........+..|.|.++++ +|++..+.++......++.+++.++.|+++||+++
T Consensus 251 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~ 326 (465)
T TIGR00894 251 SLPIKAIPKSLP----VWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKS 326 (465)
T ss_pred CCCHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666665543 4455555555666667778888988766 89999999999999999999999999999999865
Q ss_pred chhhhh---hhHHHHHHH---HHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhh
Q 012626 297 RALLIS---GGIQMITCQ---VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSA 370 (459)
Q Consensus 297 ~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 370 (459)
|+.... ......++. ....+.... ........+....+.+.+.+... +.......|..| +.+|.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-~~~g~ 396 (465)
T TIGR00894 327 SKTLSLTAARKIFNGIGGLGPGIFAYALPY--------LSAAFYLTIIILTLANAVSSGPL-AGVLINSLDLAP-RFLGF 396 (465)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCchHHHHHHHHHHHHHhhhhh-hhhhhchhhcCh-hHHHH
Confidence 432210 011111111 111111100 00112222223333333332222 222344456666 48999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhc---cchhHHHHHHHHHHHHHhheeeccC
Q 012626 371 GQSITVAVNLFFTFVIAQIFLTLLCSF---KFGIFLFFAGWVTIMTIFVYFFLPE 422 (459)
Q Consensus 371 ~~g~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~ 422 (459)
+.|+.+..+.+++.++|.+.|.+.+.. .|...+.+.++..+++.+......+
T Consensus 397 ~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 397 IKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 999999999999999999999887753 2555666666666666666555443
No 30
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=7e-34 Score=265.23 Aligned_cols=348 Identities=12% Similarity=0.088 Sum_probs=246.5
Q ss_pred hhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 012626 15 KKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLG 94 (459)
Q Consensus 15 ~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (459)
....+.+++|+|++.++.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|
T Consensus 23 ~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G 102 (382)
T PRK10091 23 MGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG 102 (382)
T ss_pred HhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34556678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHH-HhccCC
Q 012626 95 VGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG-GILLPE 173 (459)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~e 173 (459)
++.+...+....++.|++|+++|++++++...+..+|..+++++ +....+..+||+.|++.++..++..+. .+++||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 103 FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPL--GTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred hhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccH--HHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998888889999999999999999999999999999999998 445556678999999988877666544 345777
Q ss_pred ChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHH
Q 012626 174 TPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILF 253 (459)
Q Consensus 174 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (459)
.++ +.+. + . ++.+ +.++++.. +..................
T Consensus 181 ~~~----~~~~-~-----------------~-------------~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 220 (382)
T PRK10091 181 IRD----EAKG-G-----------------L-------------REQF-HFLRSPAP----WLIFAATMFGNAGVFAWFS 220 (382)
T ss_pred CCc----cccc-C-----------------H-------------HHHH-HHhcChHH----HHHHHHHHHHHHHHHHHHH
Confidence 541 0000 0 0 0001 11222221 1111111112122222333
Q ss_pred hH-HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchh
Q 012626 254 YA-PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSF 332 (459)
Q Consensus 254 ~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (459)
+. |++.+.+|+++.+.+.......++.+++.++.+++.||+++|+.+..+.....++.+.+.... +.
T Consensus 221 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~------------~~ 288 (382)
T PRK10091 221 YIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG------------GM 288 (382)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH------------hh
Confidence 44 444445899999999999999999999999999999999999988877776666654443321 11
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHH
Q 012626 333 SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS-FKFGIFLFFAGWVTI 411 (459)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 411 (459)
.+.......+.+.+......+.......+..|++.++.+ ..+....+|.+++|.+.|.+.|. .++...+...++..+
T Consensus 289 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~ 366 (382)
T PRK10091 289 KTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSF 366 (382)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHH
Confidence 222222223333332222223322334444455555544 34677889999999999999996 567666666655554
Q ss_pred HHHhhee
Q 012626 412 MTIFVYF 418 (459)
Q Consensus 412 ~~~~~~~ 418 (459)
+.+.+..
T Consensus 367 ~~~~~~~ 373 (382)
T PRK10091 367 AAMSSLL 373 (382)
T ss_pred HHHHHHH
Confidence 4444433
No 31
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=3.8e-34 Score=275.26 Aligned_cols=374 Identities=12% Similarity=0.011 Sum_probs=269.8
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhH
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL 83 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
+....+|+...+...|.+.+|+|.+.++.+|+.+.+.++.+++.+++|+++||+|||++++.+.+++.++++++++++|+
T Consensus 15 ~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~ 94 (495)
T PRK14995 15 YIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTA 94 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 45566778888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccchhhhHHHHhcc-CCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHH
Q 012626 84 AMLLTGRILLGVGIGFGNQAVPLYLSEMA-PTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPAL 162 (459)
Q Consensus 84 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~ 162 (459)
+.++++|+++|++.+...+.....+.+++ |+++|++++++......+|..+||.+ +....+..||||.|++...+++
T Consensus 95 ~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~l--gg~l~~~~gwr~~f~i~~~~~~ 172 (495)
T PRK14995 95 SWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLV--GGILLEHFYWGSVFLINVPIVL 172 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhccCChHHHHHHHHHHHH
Confidence 99999999999999998888888887776 67899999999999999999999999 6666777899999999888777
Q ss_pred HHHHHH-hccCCChHHHHhhCcHHHHHHHH---------HHHh-C-CCcccHHH-HH--------HHHHHHhhcccCCch
Q 012626 163 MMTVGG-ILLPETPNSLIERGKKVEGRRVL---------EKIR-G-TKEVNAEY-QD--------MVDASELANSIKHPF 221 (459)
Q Consensus 163 ~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~---------~~~~-~-~~~~~~~~-~~--------~~~~~~~~~~~~~~~ 221 (459)
+..++. +++||+|+.. +++.+...... .... . .+...... .. .......+...+.+.
T Consensus 173 ~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~ 250 (495)
T PRK14995 173 VVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPM 250 (495)
T ss_pred HHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 665544 5577765321 11111110000 0000 0 00000000 00 000000011112222
Q ss_pred --HHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCch
Q 012626 222 --RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRA 298 (459)
Q Consensus 222 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 298 (459)
.+++|++... ...+..+...........+.|.+++. +|+++.+++....+..++..++.++.|++.||+|+|+
T Consensus 251 ~~~~lf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 326 (495)
T PRK14995 251 IDMRLFTHRIIL----SGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRL 326 (495)
T ss_pred cCHHHhCCcccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 3455554422 22222333333445566677877776 8999999999999999999999999999999999998
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHH
Q 012626 299 LLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAV 378 (459)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 378 (459)
.+..+.....++...+.... .....+......++.+.+.+....+. ...+.+..|+++++.+.++.+..
T Consensus 327 ~~~~g~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~l~G~g~g~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~ 395 (495)
T PRK14995 327 VATGGMALSALSFYGLAMTD----------FSTQQWQAWGLMALLGFSAASALLAS-TSAIMAAAPPEKAAAAGAIETMA 395 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhc----------CCCchHHHHHHHHHHHHhHHHHHHHH-HHHHHhcCCHHhcchHHHHHHHH
Confidence 88777766666555443321 01122233344555566666554444 45556888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012626 379 NLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 379 ~~~g~~~~~~~~~~~~~~ 396 (459)
..+|+.+++.+.+.+.++
T Consensus 396 ~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 396 YELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 32
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1e-33 Score=266.41 Aligned_cols=351 Identities=17% Similarity=0.154 Sum_probs=250.0
Q ss_pred hhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH--------HhHHH
Q 012626 14 LKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA--------ANLAM 85 (459)
Q Consensus 14 ~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--------~~~~~ 85 (459)
.+.....+++++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++.+.+.++ .+++.
T Consensus 35 ~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (399)
T PRK05122 35 LAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLL 114 (399)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHH
Confidence 3444444678899999999999999999999999999999999999999999999988887766554 25778
Q ss_pred HHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHH
Q 012626 86 LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT 165 (459)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~ 165 (459)
+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++|+.+ +....+..|||+.+++.++..++..
T Consensus 115 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l--~~~l~~~~g~~~~~~~~~~~~~~~~ 192 (399)
T PRK05122 115 LLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPL--GVLLYHWGGLAGLGLLIMLLALLGL 192 (399)
T ss_pred HHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHH--HHHHHHcccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 4555566789999888776655444
Q ss_pred HHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhh
Q 012626 166 VGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQIL 245 (459)
Q Consensus 166 ~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (459)
+.....|++++ ++ + ++.++++.+++.... .....+ ..
T Consensus 193 ~~~~~~~~~~~-----~~-~-------------------------------~~~~~~~~~~~~~~~--~~~~~~----~~ 229 (399)
T PRK05122 193 LLARPRPAVPP-----VK-G-------------------------------ERLPFRRVLGRVWPY--GMGLAL----AS 229 (399)
T ss_pred HHHhcCCCCCC-----CC-c-------------------------------cchhHHHHHHHHHHH--HHHHHH----HH
Confidence 33332333220 00 0 000111112111100 111111 11
Q ss_pred cchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 246 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
..+.....+.+.+..+.|. .+.+.......++.+++.++.+++.||+++|+.+..+.....++...+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------- 299 (399)
T PRK05122 230 IGFGTIATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-------- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh--------
Confidence 1233444566666666666 344566677888889999999999999999998877776666655544432
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 405 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 405 (459)
++.+.......+.+.+.+...... .....|..|++.|+++.|+.+....+|..+++.+.|.+.+..++...+..
T Consensus 300 -----~~~~~~~~~~~l~G~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 373 (399)
T PRK05122 300 -----PSPWMALIGAALTGFGFSLVFPAL-GVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLA 373 (399)
T ss_pred -----ccHHHHHHHHHHHHHhHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 122333344444555554433332 34556888999999999999999999999999999999998888777777
Q ss_pred HHHHHHHHHhheeeccCCCC
Q 012626 406 AGWVTIMTIFVYFFLPETKG 425 (459)
Q Consensus 406 ~~~~~l~~~~~~~~~~~~~~ 425 (459)
.+++.+++++.....+++++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 374 AALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHHHhccccc
Confidence 76666666666555555443
No 33
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.3e-32 Score=267.18 Aligned_cols=391 Identities=17% Similarity=0.155 Sum_probs=284.8
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccc
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 101 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 101 (459)
.+.++.+.....+..+++++|.++|++++|+++||+|||++++.++++..++.+++++++|++.+++.|+++|++.++..
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 36678888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhh
Q 012626 102 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIER 181 (459)
Q Consensus 102 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~ 181 (459)
.....+++|++++++|+.+..+ ......|..++++.+ ..... +||+.+++..+++++.++.+++.||+|||+..+
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~--a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGA--AYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSK 264 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHH--HHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHc
Confidence 9999999999999999999999 555555555566553 22222 799999999999998877766677999999999
Q ss_pred CcHHHHHHHHHHHhCCC---cccHHHHHHH----HHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHh
Q 012626 182 GKKVEGRRVLEKIRGTK---EVNAEYQDMV----DASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY 254 (459)
Q Consensus 182 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (459)
++.+++.+.+++..+.+ ....+..+.. +......+++..+.++++.+..++..+...+..+.....++..
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl--- 341 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGL--- 341 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhh---
Confidence 99999999998886543 1111111111 1111111233456777776644444444443332222222221
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhh
Q 012626 255 APVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 334 (459)
Q Consensus 255 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (459)
+......|. .........+.....+....+...|+.|||.....+.....++++...+... ....+
T Consensus 342 -~~~~~~lg~---~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 407 (521)
T KOG0255|consen 342 -SLNVSGLGG---NIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPD----------DLGGW 407 (521)
T ss_pred -hhhhhhcCc---hHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhc----------cchhH
Confidence 111222332 3344555556677888888899999999999999999988888888877631 11112
Q ss_pred HHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHH
Q 012626 335 LVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLF-FAGWVTIMT 413 (459)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 413 (459)
.......+..++.+.++... +.+.+|++|+..|..+.+..+....++.+++|.+...... ........ +.....+.+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~ 485 (521)
T KOG0255|consen 408 LHWILPLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLG 485 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHH
Confidence 34444445555555555555 7888999999999999999999999999999988765444 33222222 345555666
Q ss_pred HhheeeccCCCCCCHHHHHHHHh
Q 012626 414 IFVYFFLPETKGVPIEEMILLWR 436 (459)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~ 436 (459)
.+...++||++++.+.+..++.+
T Consensus 486 ~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 486 LLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHhcCcccCCCCCchhHHHHH
Confidence 66668999999998766554433
No 34
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=4.4e-33 Score=260.13 Aligned_cols=337 Identities=18% Similarity=0.127 Sum_probs=245.4
Q ss_pred cCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 012626 17 KHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVG 96 (459)
Q Consensus 17 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (459)
..+.+.+++|+++++.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|+++|++
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 121 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLA 121 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHh
Confidence 34557789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCCh
Q 012626 97 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETP 175 (459)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~p 175 (459)
.+...+...+++.|++|+++|++++++...+.++|.+++|++ +....+..|||+.|++.++++++..+.. ...||+|
T Consensus 122 ~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l--~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 122 LGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPL--GSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred hHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999999999999999999999999999 5555666799999999887776655443 3367654
Q ss_pred HHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHh-
Q 012626 176 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY- 254 (459)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (459)
+. +. +.+...++.++++..+. ..+..+...........+
T Consensus 200 ~~-----~~-------------------------------~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~ 239 (394)
T PRK10213 200 GE-----PS-------------------------------HQKQNTFRLLQRPGVMA----GMIAIFMSFAGQFAFFTYI 239 (394)
T ss_pred cc-----cc-------------------------------cchhHHHHHhcCHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 10 00 00011223444333222 212222222222333334
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhh
Q 012626 255 APVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 334 (459)
Q Consensus 255 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (459)
.|.+.+++|+++.+.+......+++.+++.++.+++.||.+ |+.+.............+.... +..+
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~------------~~~~ 306 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWG------------SDKI 306 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHh------------hhHH
Confidence 47777778999999999999999999999999999999954 4443333333233322222221 2233
Q ss_pred HHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 012626 335 LVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 410 (459)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (459)
.......+.+.+++.... ...+++.+..| ++++...+......++|..+++.+.|.+.|..++...+...++..
T Consensus 307 ~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~ 380 (394)
T PRK10213 307 VATGVAIIWGLTFALVPV-GWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLM 380 (394)
T ss_pred HHHHHHHHHHHHHHhhhH-HHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHH
Confidence 344444555555543333 33345667777 456677788888889999999999999999888766666655443
No 35
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.3e-33 Score=269.73 Aligned_cols=367 Identities=12% Similarity=0.026 Sum_probs=235.5
Q ss_pred hhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 012626 13 YLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRIL 92 (459)
Q Consensus 13 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 92 (459)
......+.+++++|++.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.+++.|++
T Consensus 54 ~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l 133 (476)
T PLN00028 54 AAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFF 133 (476)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 34445566788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhh--c-----cccchhHHHHHhhhHHHHHHH
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ--K-----LETWGWRLSLGLAAAPALMMT 165 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~--~-----~~~~gwr~~f~~~~~~~~~~~ 165 (459)
+|++.+.. +....+++|++|+++|++++++.....++|..+++.+..... . .+..|||+.|++.++++++..
T Consensus 134 ~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~ 212 (476)
T PLN00028 134 IGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMG 212 (476)
T ss_pred HHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHH
Confidence 99998765 455678999999999999999998777777777665531111 0 112589999999999888776
Q ss_pred HHHhccC-CChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhh
Q 012626 166 VGGILLP-ETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQI 244 (459)
Q Consensus 166 ~~~~~~~-e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (459)
+..++++ +.|+ ++.++.+ ++.+ .++......+++.++++. .+...+..+..
T Consensus 213 l~~~~~~~~~p~-----~~~~~~~-------~~~~------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 264 (476)
T PLN00028 213 ILVLTLGQDLPD-----GNYRELK-------KSGT------------MPKDSFSKVLRYGVTNYR----TWILALTYGYS 264 (476)
T ss_pred HHHHHHcCcCCC-----CchhhHH-------hcCc------------cccccHHHHHHHHHcCch----hHHHHHHHHHH
Confidence 6655554 3341 1000000 0000 000000011233333333 22222222223
Q ss_pred hcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchh----hhhhhHHHHHHHHHHHHHHh
Q 012626 245 LTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRAL----LISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 245 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 319 (459)
.........+.|.++.+ +|+++.+++.......++.++++++.|+++||++||+. .........+..+.......
T Consensus 265 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~ 344 (476)
T PLN00028 265 FGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR 344 (476)
T ss_pred HHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 33334455566766654 79999999999999999999999999999999986521 11111111111111111100
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 399 (459)
.++.+..+..+++++.+...... ..+.+..+..| +.++++.|+.+..+.+|+++++.+.+ ..+..+|
T Consensus 345 ----------~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y 411 (476)
T PLN00028 345 ----------ANSLGAAIVVMILFSIFVQAACG-ATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYST 411 (476)
T ss_pred ----------cchHHHHHHHHHHHHHHHHHhhh-hhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccH
Confidence 01122222233333333332222 23455566554 78999999998888888888877654 1223346
Q ss_pred hhHHHHHHHHHHHHHhheeecc
Q 012626 400 GIFLFFAGWVTIMTIFVYFFLP 421 (459)
Q Consensus 400 ~~~~~~~~~~~l~~~~~~~~~~ 421 (459)
...+.+.+++.+++.++.++.+
T Consensus 412 ~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 412 ETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHhee
Confidence 6666666666665555555544
No 36
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=4e-33 Score=262.78 Aligned_cols=363 Identities=17% Similarity=0.212 Sum_probs=258.1
Q ss_pred hhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 012626 12 VYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRI 91 (459)
Q Consensus 12 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 91 (459)
.......+.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++.+++.++..++++++.+++.|+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (398)
T TIGR00895 34 AAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRF 113 (398)
T ss_pred HHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 33444556677889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHH-HHHhc
Q 012626 92 LLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT-VGGIL 170 (459)
Q Consensus 92 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~-~~~~~ 170 (459)
+.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+ .....+..|||+.|++.++..++.. +...+
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 191 (398)
T TIGR00895 114 LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFL--AGWLIPVFGWRSLFYVGGIAPLLLLLLLMRF 191 (398)
T ss_pred HHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHH--HHHHhhcccceeehhhhhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998 5555566789999999876655544 44566
Q ss_pred cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHH
Q 012626 171 LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINS 250 (459)
Q Consensus 171 ~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (459)
+||++++..++ +.++..+..++.......+.+. +..++.+..+..+...+..++++..+... ...+..+........
T Consensus 192 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 268 (398)
T TIGR00895 192 LPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS-ALPEQKATQGTKRSVFKALFQGKTARITV-LLWLLYFMLLVGVYF 268 (398)
T ss_pred CCCCChHHHhc-CHHHHHHHHHHHHHhccccccc-cccccccccchhhHHHHHHhcchhHHHHH-HHHHHHHHHHHHHHH
Confidence 89988765544 3333333232222111100000 00000000001111122233333222222 222333334445556
Q ss_pred HHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc
Q 012626 251 ILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 330 (459)
Q Consensus 251 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (459)
...+.|++.++.|.++.+.+.......++.+++.++.+++.||+++|+... ......+....+....
T Consensus 269 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~------------ 335 (398)
T TIGR00895 269 LTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGAVFAVLVGSTL------------ 335 (398)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHHHHHHHh------------
Confidence 677788777789999999999999999999999999999999999984433 3333333322222211
Q ss_pred hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 012626 331 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 393 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 393 (459)
.+.+......++.+.+.+... +...+++.|.+|++.|+++.|+.+.+..+|..++|.+.|.+
T Consensus 336 ~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 336 FSPTLLLLLGAIAGFFVNGGQ-SGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred hCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 122333344444555554443 34468889999999999999999999999999999999875
No 37
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.5e-32 Score=257.68 Aligned_cols=343 Identities=12% Similarity=0.089 Sum_probs=242.5
Q ss_pred hhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH--------HHhHHHH
Q 012626 15 KKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA--------AANLAML 86 (459)
Q Consensus 15 ~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~--------~~~~~~l 86 (459)
+..+..+++++|+|+.+.|++.+++.+++.++++++|+++||+||||++..+.+...++.+.+.. .++++.+
T Consensus 36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (392)
T PRK12382 36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALL 115 (392)
T ss_pred hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHH
Confidence 33333467889999999999999999999999999999999999999999998887776553322 3688999
Q ss_pred HHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHH
Q 012626 87 LTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTV 166 (459)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~ 166 (459)
++.|+++|++.+...+...+++.|++|+++|++++++.+.+...|..++|++ +....+..|||+.+.+..+..++...
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~--~~~l~~~~g~~~~~~~~~~~~~~~~~ 193 (392)
T PRK12382 116 VVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPL--GLLLHSHFGFAALALTTMVLPLLAWA 193 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHH--HHHHHhccChHHHHHHHHHHHHHHHH
Confidence 9999999999998888899999999999999999999999999999999999 44455567899887766555443333
Q ss_pred HHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhc
Q 012626 167 GGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILT 246 (459)
Q Consensus 167 ~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (459)
.....||.++. + + ++.+.++..+...... . ...+ ...
T Consensus 194 ~~~~~~~~~~~----~---~------------------------------~~~~~~~~~~~~~~~~-~-~~~l----~~~ 230 (392)
T PRK12382 194 FNGTVRKVPAH----A---G------------------------------ERPSLWSVVGLIWKPG-L-GLAL----QGV 230 (392)
T ss_pred HHHhccCCCCC----c---c------------------------------cCchHHHHHHHHHHhH-H-HHHH----HHH
Confidence 22223433210 0 0 0001111111111111 1 1111 112
Q ss_pred chHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCc
Q 012626 247 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 326 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (459)
.......+.+.++++.+++ +.+.......++.+++.++.|++.||+++|+.+..+.....++.+++...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--------- 299 (392)
T PRK12382 231 GFAVIGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA--------- 299 (392)
T ss_pred HHhHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc---------
Confidence 2334455666677776664 34556667778888999999999999999999888777666665544332
Q ss_pred cccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 012626 327 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFA 406 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (459)
++.+.......+.+.+.+.... .......|.+|+++|+++.|+.+....++..++|.+.|.+.|+.++...+.+.
T Consensus 300 ----~~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~ 374 (392)
T PRK12382 300 ----PTAWVALAGAALTGAGCSLIFP-ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAG 374 (392)
T ss_pred ----ccHHHHHHHHHHHHHHHHhHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 1123333334444444443333 33456678899999999999999999999999999999999999988777777
Q ss_pred HHHHHHHHhhee
Q 012626 407 GWVTIMTIFVYF 418 (459)
Q Consensus 407 ~~~~l~~~~~~~ 418 (459)
+.+.+++.+...
T Consensus 375 ~~~~~~~~~~~~ 386 (392)
T PRK12382 375 AISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHHHH
Confidence 766666655543
No 38
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=5e-34 Score=267.11 Aligned_cols=372 Identities=13% Similarity=0.063 Sum_probs=257.2
Q ss_pred hHHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 012626 3 AFLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN 82 (459)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
.|...|+++.......+.+++++|+|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 82 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS 82 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh
Confidence 35566777777777788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHH-HhhhhhccccchhHHHHHhhhHHH
Q 012626 83 LAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANM-INYGTQKLETWGWRLSLGLAAAPA 161 (459)
Q Consensus 83 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~-~~~~~~~~~~~gwr~~f~~~~~~~ 161 (459)
++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..++++ + .....+..+||+.|++.+++.
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLV--LFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHH--HHHHHhcCCchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999994 4 233344568999999988877
Q ss_pred HHHHHHH-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHH
Q 012626 162 LMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMP 240 (459)
Q Consensus 162 ~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (459)
++..+.. ++.||+|+....++.+++. .++.+.+ .++.++..+..+...++.++++. ++...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 224 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMP---------NEEPDGD---AEKKEEELTKKQIFLQYVLLNKV----LWYISLG 224 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCc---------ccccccc---cccccccccchHHHHHHHHhcch----HHHHHHH
Confidence 6655444 4567766321111000000 0000000 00000000111112233444433 3333333
Q ss_pred HHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHh
Q 012626 241 MFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (459)
.+...........+.|.++++ .|+++.+.+.......++.+++.++.+++.||..+|+...............+.....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
T TIGR00881 225 YVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL 304 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Confidence 333344445566677777755 8999999999999999999999999999999864433222222221211111111110
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 399 (459)
. +..............+.. ..+..+....+..|.+|++.|+++.|+.+....+++.++|.+.|.+.|+.++
T Consensus 305 ---~-----~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 375 (379)
T TIGR00881 305 ---N-----PAANPLMDLICLFALGFL-VYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGW 375 (379)
T ss_pred ---C-----cchhHHHHHHHHHHHHHH-HhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcc
Confidence 0 011122222222222222 2222333346678999999999999999999999999999999999998886
Q ss_pred hh
Q 012626 400 GI 401 (459)
Q Consensus 400 ~~ 401 (459)
..
T Consensus 376 ~~ 377 (379)
T TIGR00881 376 AG 377 (379)
T ss_pred cc
Confidence 54
No 39
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-33 Score=258.91 Aligned_cols=365 Identities=17% Similarity=0.240 Sum_probs=272.4
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHhhcccc
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIGF 99 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~ 99 (459)
+.++++|+.+.+++.++++.|+.+++++.|+++||+|.|+++..+.++.++++++.+++. +++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 568999999999999999999999999999999999999999999999999999999885 456889999999999999
Q ss_pred cchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHhhhHHHHHHHHHHhc-cCCChHH
Q 012626 100 GNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGIL-LPETPNS 177 (459)
Q Consensus 100 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~-~gwr~~f~~~~~~~~~~~~~~~~-~~e~p~~ 177 (459)
.+|+...+.++|.|++||++..++...+..+|.+++.++ .+.+.+. .||+++|++.++.+++..+++++ ..|+|..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~--sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPV--SGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHh--HHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 999999999999999999999999999999999999988 5555665 89999999999999998887755 5777732
Q ss_pred HHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHH
Q 012626 178 LIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV 257 (459)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (459)
. ..-..+|. +++.+.. .+.+.+++.+.|++++++++. ++.+.+..+........+..|.|.
T Consensus 223 h-~~is~~El----~~I~~~k----------~~~~~~~~~~vP~~~i~ts~~----vwai~~~~f~~~~~~~~l~~y~Pt 283 (466)
T KOG2532|consen 223 H-PNISEKEL----KYIEKGK----------SEAHVKKKPPVPYKAILTSPP----VWAIWISAFGGNWGFYLLLTYLPT 283 (466)
T ss_pred C-CCCCHHHH----HHHHhcc----------cccccCCCCCCCHHHHHcCHH----HHHHHHHHHHHHHHHHHHHHHhhH
Confidence 0 00011111 1111100 001111114678999998776 777788888888889999999999
Q ss_pred HHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCc--------hh-hhhhhHHHHHHHHHHHHHHhhccCCCcc
Q 012626 258 LFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR--------AL-LISGGIQMITCQVIVSIILGLKFGPNQE 327 (459)
Q Consensus 258 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (459)
|+++ +|++..+.|+..++..+...+..+++|.++||+.+| |. -.++....+++++.+.+.
T Consensus 284 Y~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~---------- 353 (466)
T KOG2532|consen 284 YLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT---------- 353 (466)
T ss_pred HHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec----------
Confidence 9998 999999999999999999999999999999998663 11 122223333333333222
Q ss_pred ccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh---ccchhHHH
Q 012626 328 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS---FKFGIFLF 404 (459)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~ 404 (459)
+....+..+.++.+.....+...... +.-..+. .+++.+..+|+.+....+.++++|.+.+.+... ..|...+.
T Consensus 354 -~~~~~~~a~~~l~~~~~~~g~~~~Gf-~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~ 430 (466)
T KOG2532|consen 354 -SDEHRLLAVILLTIAIGLSGFNISGF-YKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFL 430 (466)
T ss_pred -CCCcchHHHHHHHHHHHHcccchhhh-Hhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHH
Confidence 11222223333333222222222221 1222233 457899999999999999999999999998842 35777777
Q ss_pred HHHHHHHHHHhheeec
Q 012626 405 FAGWVTIMTIFVYFFL 420 (459)
Q Consensus 405 ~~~~~~l~~~~~~~~~ 420 (459)
+.+...+++.+.+.+.
T Consensus 431 i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 431 IAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHhchheeEe
Confidence 7777777666665554
No 40
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=9.2e-34 Score=269.38 Aligned_cols=373 Identities=14% Similarity=0.134 Sum_probs=249.0
Q ss_pred hhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHH
Q 012626 14 LKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLT-GRIL 92 (459)
Q Consensus 14 ~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l 92 (459)
.+...+.+.+++|++.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.++++++++++++++.+++ .|++
T Consensus 38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 117 (455)
T TIGR00892 38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFI 117 (455)
T ss_pred hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 344556677899999999999999999999999999999999999999999999999999999999999998865 5799
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhcc-
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL- 171 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~- 171 (459)
+|++.+...+...+++.++++ ++|+++.++...+..+|..++|++ .....+..|||+.|++.+++.++..+..+++
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l--~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 118 TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPL--NQYLFESFGWRGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHH--HHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999877788888999996 789999999999999999999998 5555566799999999998877665544443
Q ss_pred CCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHH
Q 012626 172 PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSI 251 (459)
Q Consensus 172 ~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (459)
++.+... +.+.++. +........++. .. ....++..+....+.++++. ++......+.....+...
T Consensus 195 ~~~~~~~--~~~~~~~----~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~ 260 (455)
T TIGR00892 195 PVGPSQR--VSKSKSK----EGLPPDGSTKKL--SK--KSTAEKINRFLDFSLFTHRG----FLVYLSGNVIMFLGFFAP 260 (455)
T ss_pred CCCcccc--ccccccc----ccCCCCCccccc--cc--cchhhhhhhhcchHHhcCch----HHHHHHHHHHHHHHccch
Confidence 3222100 0000000 000000000000 00 00000000000113444443 222222233333334445
Q ss_pred HHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh--CCchhhhhhhHHHHHHHHHHHHHHhhccCCCcccc
Q 012626 252 LFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL--GRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 329 (459)
Q Consensus 252 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (459)
..+.|.+.++.|++..+++......+++.++++++.+++.||. ++|+...........+...+....
T Consensus 261 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~----------- 329 (455)
T TIGR00892 261 IIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL----------- 329 (455)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 5667777778899999999999999999999999999999974 333333332222221211111111
Q ss_pred chhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHH
Q 012626 330 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGW 408 (459)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~ 408 (459)
.++.+..+...++.+.+.+.. .+...+++.|.+|+++++++.|+.+....+|.+++|.+.|.+.+..+ +...+...++
T Consensus 330 ~~~~~~~~i~~~~~G~~~g~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~ 408 (455)
T TIGR00892 330 AGDYTGLVIYCIFFGLSFGSV-GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGS 408 (455)
T ss_pred hchHHHHHHHHHHHHHHhchH-HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhH
Confidence 122333344444555544433 33445777899999999999999999999999999999999998774 6666555555
Q ss_pred HHHHHHh
Q 012626 409 VTIMTIF 415 (459)
Q Consensus 409 ~~l~~~~ 415 (459)
+.+++.+
T Consensus 409 ~~li~~~ 415 (455)
T TIGR00892 409 IVVSAGL 415 (455)
T ss_pred HHHHHHH
Confidence 5444443
No 41
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1e-32 Score=258.51 Aligned_cols=355 Identities=10% Similarity=0.027 Sum_probs=254.3
Q ss_pred hhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 012626 12 VYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRI 91 (459)
Q Consensus 12 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 91 (459)
.......+++.+++|+|+++.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|+
T Consensus 24 ~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~ 103 (394)
T PRK03699 24 IVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMF 103 (394)
T ss_pred HHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence 34455567788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc-cccchhHHHHHhhhHHHHHHHHHHhc
Q 012626 92 LLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK-LETWGWRLSLGLAAAPALMMTVGGIL 170 (459)
Q Consensus 92 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~-~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (459)
++|++.+...+...+++.|++|+++|+++++..+....+|..++|.+. ... .+..+||+.|.+.+++.++..+..++
T Consensus 104 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK03699 104 VLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIA--AYLLARSIEWYWVYACIGLVYVAIFILTLF 181 (394)
T ss_pred HHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH--HHHHhccccHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999888999988988873 332 23468999999988877665544433
Q ss_pred cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHH
Q 012626 171 LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINS 250 (459)
Q Consensus 171 ~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (459)
.+.|+. ++++. + +.++..+ ... ++.++...+..+........
T Consensus 182 -~~~p~~--~~~~~-------------~-------------~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~ 223 (394)
T PRK03699 182 -SEFPAL--GKHAP-------------K-------------ADKPVAK--------EKW-GIGVLFLAIAALLYILAQLT 223 (394)
T ss_pred -cCCccc--cccCc-------------c-------------ccCcccc--------ccC-ChHHHHHHHHHHHHHHHHHH
Confidence 222210 00000 0 0000001 111 11223333333333344556
Q ss_pred HHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcccc
Q 012626 251 ILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 329 (459)
Q Consensus 251 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (459)
+..|.|.++++ +|+++.+.+.......++..++.++.+++.||+++|+.+........+...++...
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~------------ 291 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT------------ 291 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc------------
Confidence 67788888855 89999999999999999999999999999999999988876655544433332211
Q ss_pred chhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 012626 330 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 409 (459)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (459)
++.+......+..+.+.+..+ +...++..|..| +.++...+......++|..++|.+.|.+.+..++...+....++
T Consensus 292 -~~~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~ 368 (394)
T PRK03699 292 -DDPSHLLYAILGLGFFSSAIY-TTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGL 368 (394)
T ss_pred -CCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHH
Confidence 112222333334444333232 333345556655 44677788999999999999999999999988877666655555
Q ss_pred HHHHHhheeecc
Q 012626 410 TIMTIFVYFFLP 421 (459)
Q Consensus 410 ~l~~~~~~~~~~ 421 (459)
.+++.+.....+
T Consensus 369 ~~~~~~~~~~~~ 380 (394)
T PRK03699 369 YAVVFVMCILLG 380 (394)
T ss_pred HHHHHHHHHHHH
Confidence 555544444443
No 42
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=3e-32 Score=254.62 Aligned_cols=356 Identities=13% Similarity=0.138 Sum_probs=251.8
Q ss_pred hhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHH-HHHHHHHHHHHHHHHHHhHHHHHHH
Q 012626 11 DVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASII-CGGISFLLGAALNAAAANLAMLLTG 89 (459)
Q Consensus 11 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (459)
....+.....+++++|.|+.+.|++.+.+.+...+.+++.|+++||+||||.++ .+..+..++.+++++++|++.+++.
T Consensus 14 ~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 93 (375)
T TIGR00899 14 ALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVL 93 (375)
T ss_pred HHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 344444555577889999999999999999999999999999999999988755 4666667778888999999999999
Q ss_pred HHHHhhcccccchhhhHHHHhccCCCcchHH--HHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHH
Q 012626 90 RILLGVGIGFGNQAVPLYLSEMAPTHLRGGL--NMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG 167 (459)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~ 167 (459)
|+++|.+.+...|...+++.|+.|+++|++. .+....+.++|.+++|++ .....+..|||+.|++.++..++..+.
T Consensus 94 ~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~--~~~l~~~~~~~~~f~~~~~~~~~~~~~ 171 (375)
T TIGR00899 94 GVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPL--AFWLALGFGFTVMFLTAALAFVLCGVL 171 (375)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhH--HHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999988888888888999999988777754 578888889999999998 555556679999999998887766655
Q ss_pred H-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhc
Q 012626 168 G-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILT 246 (459)
Q Consensus 168 ~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (459)
. +++||+|++..++ + .+.+.++.++++..+.......+ ...
T Consensus 172 ~~~~~~~~~~~~~~~----~------------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~ 213 (375)
T TIGR00899 172 VWLFLPSYPRGAPGA----L------------------------------TRLEVRGLLASRDTRLLFVACTL----MWG 213 (375)
T ss_pred HHHhCCCcccCcccc----c------------------------------CcchhhhhhcCcchHHHHHHHHH----HHH
Confidence 4 4478876321000 0 00111223333332222222221 111
Q ss_pred chHHHHHhHHHHH-HhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 247 GINSILFYAPVLF-QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 247 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
.......+.|.++ +++|.++.+.+.......+..+++.++.+++.||++||+.+..+.....+....+...
T Consensus 214 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------- 285 (375)
T TIGR00899 214 CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD-------- 285 (375)
T ss_pred HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH--------
Confidence 2233344556665 4589998888888877777788889999999999999998877655444333222221
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 405 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 405 (459)
++.+.......+.+.+.+.. .+....+..|..|+ +++++.++.+...++|..++|.+.|.+.+..++...+..
T Consensus 286 -----~~~~~~~~~~~~~g~~~g~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~ 358 (375)
T TIGR00899 286 -----NSLWALLMLQLLNAIFIGIL-AGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWF 358 (375)
T ss_pred -----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Confidence 12232333333334444433 23445677788875 467999999999999999999999999999888877777
Q ss_pred HHHHHHHHHhheeecc
Q 012626 406 AGWVTIMTIFVYFFLP 421 (459)
Q Consensus 406 ~~~~~l~~~~~~~~~~ 421 (459)
.+++.+.+.+...+++
T Consensus 359 ~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 359 AIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHheec
Confidence 7777777766665554
No 43
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-34 Score=252.28 Aligned_cols=394 Identities=20% Similarity=0.256 Sum_probs=284.7
Q ss_pred ccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHh-------HHHHHHHHHHHhhccc
Q 012626 26 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN-------LAMLLTGRILLGVGIG 98 (459)
Q Consensus 26 ~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~r~l~G~~~~ 98 (459)
++++.-.+.+..+..+|.++|++++|+++||+|||+++...++++.+++++++++.+ .+++...|++.|+|.|
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 467778899999999999999999999999999999999999999999998887632 4789999999999999
Q ss_pred ccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc-----c--------cchhHHHHHhhhHHHHHHH
Q 012626 99 FGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKL-----E--------TWGWRLSLGLAAAPALMMT 165 (459)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~-----~--------~~gwr~~f~~~~~~~~~~~ 165 (459)
+-+|.+.+..+|...+++||...+.+-+..+.|.+.|.+++...... . ..=||..+.+.++++++.+
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l 239 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL 239 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888777777777776653222110 0 1249999999999999999
Q ss_pred HHHhccCCChHHHHhhCcH-HHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCc---hHHHhcccchhHHHHHHHHHH
Q 012626 166 VGGILLPETPNSLIERGKK-VEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHP---FRNILERRNRPQLVMAIFMPM 241 (459)
Q Consensus 166 ~~~~~~~e~p~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 241 (459)
..++.+|||++|.....++ +.+. ++..+.... +.++.++.......++.. +...+..+ .-+.++.....+
T Consensus 240 y~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k~~~~--~~~~~~~~~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~W 313 (538)
T KOG0252|consen 240 YFRLKMPETARYTALVSKKLKQAA---GDMKKVLSV--DIEAESTAESDVPPPSNSFGLFSRLFLRW-HGKHLLGTAGTW 313 (538)
T ss_pred HhhhcCCcchhHHHHhhcCHhhhh---hcccccccc--ccchhhccccCCCCcccccchHHHHHHHH-HHHHHHHHHHHH
Confidence 9999999999887433322 2222 111111111 111111111111111111 22222222 224456667777
Q ss_pred HhhhcchHHHHHhHHHHHHhcCCCCchhHH--------HHHHHHH-HHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHH
Q 012626 242 FQILTGINSILFYAPVLFQSMGFKGDASLY--------SSAMTGA-VLASSTLISIATVDKLGRRALLISGGIQMITCQV 312 (459)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 312 (459)
+..-..++....+...+++..|+.+..... ...+... +.+.|..+...++|++|||+..+.++.++.+..+
T Consensus 314 FllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~ 393 (538)
T KOG0252|consen 314 FLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFF 393 (538)
T ss_pred HhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHH
Confidence 777777777888888888877776554333 2222222 2233555666789999999999999988888777
Q ss_pred HHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 012626 313 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLT 392 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 392 (459)
.+.... .+ ........+...+..++...+.+.....+.+|.+|++.|++..|+....+-.|++++...+.+
T Consensus 394 ~~~~~y----~~-----~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~ 464 (538)
T KOG0252|consen 394 VIAGPY----NQ-----LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLY 464 (538)
T ss_pred HHcCCc----cc-----ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhH
Confidence 666532 10 112333444555556666667777778899999999999999999999999999999999999
Q ss_pred HHh-----hccchhHHHHHHHHHHHHHhheeeccCCCCCCHHHHHHH
Q 012626 393 LLC-----SFKFGIFLFFAGWVTIMTIFVYFFLPETKGVPIEEMILL 434 (459)
Q Consensus 393 ~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 434 (459)
+.+ ..+....++..+.+.+.+.+.-+++||++++++++++++
T Consensus 465 ~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~~e 511 (538)
T KOG0252|consen 465 LTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEISNE 511 (538)
T ss_pred hhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHHHhcCh
Confidence 998 566777777888888888888889999999999887443
No 44
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=3.8e-33 Score=263.69 Aligned_cols=362 Identities=14% Similarity=0.040 Sum_probs=259.2
Q ss_pred CCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH-----HHhHHHHHHHHHHH
Q 012626 19 AHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA-----AANLAMLLTGRILL 93 (459)
Q Consensus 19 ~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~ 93 (459)
+...++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.|+++
T Consensus 41 ~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 120 (417)
T PRK10489 41 PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWD 120 (417)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 3344567789999999999999999999999999999999999999988888877765543 46789999999999
Q ss_pred hhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCC
Q 012626 94 GVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 173 (459)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e 173 (459)
|++.+...+...+++.|+.|+++|+++.++.....++|..+||.+ +....+..+||+.|++.++..++..+..+.+||
T Consensus 121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (417)
T PRK10489 121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPAL--GGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPA 198 (417)
T ss_pred HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999888888889999999999999999999999999999999999 444445568999999888877776666667777
Q ss_pred ChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHH
Q 012626 174 TPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILF 253 (459)
Q Consensus 174 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (459)
+++.. ++.++ ..+ +.++.++..++++..+...+... ... .......
T Consensus 199 ~~~~~---~~~~~----------------~~~----------~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~ 244 (417)
T PRK10489 199 LPPPP---QPREH----------------PLR----------SLLAGFRFLLASPVVGGIALLGG----LLT-MASAVRV 244 (417)
T ss_pred CCCCC---ccccc----------------chH----------HHHHHHHHHHcChHHHHHHHHHH----HHH-HHHhHHH
Confidence 64210 00000 000 00112233344333222222111 111 1234555
Q ss_pred hHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchh
Q 012626 254 YAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSF 332 (459)
Q Consensus 254 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (459)
+.|.+.++ +|.++.+.++......++.+++.++.+++.||.++++.+..+.....++.+.+... ++
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~ 311 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM-------------PM 311 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc-------------ch
Confidence 67878777 89999999999999999999999999999999777777766666555554433321 11
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHH
Q 012626 333 SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLF-FAGWVTI 411 (459)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 411 (459)
.+......++.+.+.+. ..+...+++.|..|++.|+++.|+.+...++|..++|.+.|.+.+..++...+. .+++..+
T Consensus 312 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~ 390 (417)
T PRK10489 312 WILAVLCLALFGYLSAI-SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 22233333334433332 233445677899999999999999999999999999999999999888654444 4445555
Q ss_pred HHHhheeeccCCCCCCHHH
Q 012626 412 MTIFVYFFLPETKGVPIEE 430 (459)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~ 430 (459)
++++.+...++.++++.+|
T Consensus 391 ~~~~~~~~~~~~~~~~~~~ 409 (417)
T PRK10489 391 IGVLLLLVLGELRRFRQTP 409 (417)
T ss_pred HHHHHHHhccccccccccc
Confidence 5666666677766655444
No 45
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=5.9e-32 Score=249.64 Aligned_cols=364 Identities=13% Similarity=0.060 Sum_probs=253.1
Q ss_pred HHHhhhhhhhhhhcCCCCCC-ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH--
Q 012626 4 FLKKFFHDVYLKKKHAHENN-YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-- 80 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-- 80 (459)
|.-.|..-...+...+.+.+ ++|+|++|.+++.+++.++++++.++.|++.||+|+|+++.++.+++++.+++.+++
T Consensus 43 f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~ 122 (462)
T PRK15034 43 LLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQ 122 (462)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc
Confidence 45555555555555555544 899999999999999999999999999999999999999999999999999999987
Q ss_pred ---HhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhh---c----------
Q 012626 81 ---ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ---K---------- 144 (459)
Q Consensus 81 ---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~---~---------- 144 (459)
+|++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++..... .
T Consensus 123 ~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~ 201 (462)
T PRK15034 123 NPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVP 201 (462)
T ss_pred ccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 8999999999999998 7788999999999999999999999997666666655544321100 0
Q ss_pred ---cccchhHHHHHhhhHHHHHHHHHHhc-cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCc
Q 012626 145 ---LETWGWRLSLGLAAAPALMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHP 220 (459)
Q Consensus 145 ---~~~~gwr~~f~~~~~~~~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (459)
.+..+||...++.+++.++..+..++ .++.|. .+.....
T Consensus 202 ~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-------------------------------------~~~~~~~ 244 (462)
T PRK15034 202 QADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-------------------------------------SRASIAD 244 (462)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-------------------------------------cccCHHH
Confidence 01346899998888887777665554 443330 0000112
Q ss_pred hHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhh
Q 012626 221 FRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALL 300 (459)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 300 (459)
..+.+|++. .|.+.+..++.+..+..+.++.|++.++ .++............+...+.++++|+++||+|+++.+
T Consensus 245 ~~~vlk~~~----~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl 319 (462)
T PRK15034 245 QLPVLQRLH----LWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT 319 (462)
T ss_pred HHHHhCCCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH
Confidence 334555555 4555555666777778888888888766 33333333334455677888899999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCCh---------------
Q 012626 301 ISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL--------------- 365 (459)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------------- 365 (459)
.++...+.++...+..... . ....+.+...........+.+.+..++ +-++.+.+|+
T Consensus 320 ~~~~i~~~i~~~~~~l~lp-----~--~~~~~~~~~~~~~~~l~~~~G~gngsv-fk~ip~~f~~~~~~~~~~~~~~~~~ 391 (462)
T PRK15034 320 LINFIFMAIFSALLFLTLP-----G--TGSGNFIAFYAVFMGLFLTAGLGSGST-FQMIAVIFRQITIYRVKMKGGSDEQ 391 (462)
T ss_pred HHHHHHHHHHHHHHHHHhc-----c--ccccHHHHHHHHHHHHHHHhcccchHH-HHhhHHHHhhhhhhcccccccchhH
Confidence 8888777666544333320 0 001122233333333334444444444 4566677764
Q ss_pred ------hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHH-HHHhhee
Q 012626 366 ------ETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTI-MTIFVYF 418 (459)
Q Consensus 366 ------~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l-~~~~~~~ 418 (459)
++.|.+.|+....+.+|+++.|.++|...+..+ +...+....+..+ +..+.+.
T Consensus 392 ~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 392 AQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred HhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 257789999999999999999999999988766 4444444444433 3344433
No 46
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=3.6e-32 Score=262.90 Aligned_cols=373 Identities=15% Similarity=0.130 Sum_probs=266.5
Q ss_pred hhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 012626 7 KFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAML 86 (459)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (459)
..++........+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+++++++|++.+
T Consensus 14 ~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (485)
T TIGR00711 14 AVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELM 93 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHH
Confidence 44455556666777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHH
Q 012626 87 LTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTV 166 (459)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~ 166 (459)
++.|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+ +....+..+||+.|++.++++++..+
T Consensus 94 ~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~--~~~l~~~~~w~~~f~~~~~~~~~~~~ 171 (485)
T TIGR00711 94 IIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL--GGWIIENYHWRWIFLINVPIGIIVVV 171 (485)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc--HhHhccCcCceehhhhhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 55666778999999998888776655
Q ss_pred HH-hccCCChHHHHhhCcHHHHHH------------HHHHHhCCCcccHHHHH-H----------HHHHHhhcccCCchH
Q 012626 167 GG-ILLPETPNSLIERGKKVEGRR------------VLEKIRGTKEVNAEYQD-M----------VDASELANSIKHPFR 222 (459)
Q Consensus 167 ~~-~~~~e~p~~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~ 222 (459)
.. +++||+++. .+++.+.... ...+.......+..... . ....+..++.+....
T Consensus 172 ~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (485)
T TIGR00711 172 VAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDL 249 (485)
T ss_pred HHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCH
Confidence 44 446765431 1111111100 00000010000000000 0 000011111111112
Q ss_pred HHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhh
Q 012626 223 NILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLI 301 (459)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 301 (459)
+.++++..... .+..+.....+....++.|.++++ +|+++.+++.......++.+++.++.|++.||++||+.+.
T Consensus 250 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~ 325 (485)
T TIGR00711 250 RLFKYRNFTIG----CVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVT 325 (485)
T ss_pred HHHcCCChHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHH
Confidence 34555443322 222233333445566677888776 8999999999999999999999999999999999999888
Q ss_pred hhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHH
Q 012626 302 SGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLF 381 (459)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 381 (459)
.+.....++...+.... .+....+.......+.+.+.+....+.. ....+..|+++++++.|+.+....+
T Consensus 326 ~g~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 395 (485)
T TIGR00711 326 IGLILYAVGFYWRAFTF---------TPDTPFLAIALPQFIRGFGMGCFFMPLT-TIALSGLPPHKIARGSSLSNFTRQL 395 (485)
T ss_pred HHHHHHHHHHHHHhccC---------CCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHhHHHHHHHHHHHH
Confidence 77776666655444211 0111222333334455555554444443 4455778999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc
Q 012626 382 FTFVIAQIFLTLLCSF 397 (459)
Q Consensus 382 g~~~~~~~~~~~~~~~ 397 (459)
|+.+++.+.+.+.++.
T Consensus 396 g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 396 GGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988754
No 47
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.6e-32 Score=254.21 Aligned_cols=332 Identities=14% Similarity=0.031 Sum_probs=247.5
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHhh
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA-----NLAMLLTGRILLGV 95 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~ 95 (459)
...+++.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.++.++.+ +++.+++.|+++|+
T Consensus 25 ~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 104 (365)
T TIGR00900 25 YVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAI 104 (365)
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 4455788999999999999999999999999999999999999999999999999988888 99999999999999
Q ss_pred cccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhcc--CC
Q 012626 96 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL--PE 173 (459)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~--~e 173 (459)
+.+...+...+++.|++|+++|++++++.+.+..+|.+++|.+ +....+..|||+.|++.++..++..+..+.+ ||
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (365)
T TIGR00900 105 AQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGI--GGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPE 182 (365)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHH--HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999999999999999999999 4555556789999999887766655544433 33
Q ss_pred ChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHH-
Q 012626 174 TPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSIL- 252 (459)
Q Consensus 174 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 252 (459)
+++. ++.+. +++ . . ++.++.++..++++..+...... +..........
T Consensus 183 ~~~~----~~~~~--------------~~~--~-~------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 231 (365)
T TIGR00900 183 LAAS----EIQAL--------------SNA--V-L------RDTREGIKFVLKNPLLRTLLLLA----LLFNLVFAPAIV 231 (365)
T ss_pred CCCc----ccccc--------------chh--H-H------HHHHhHHHHHHcCcHHHHHHHHH----HHHHHHHHHHHH
Confidence 2210 00000 000 0 0 00012234445444433222222 22222222333
Q ss_pred HhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccch
Q 012626 253 FYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKS 331 (459)
Q Consensus 253 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (459)
.+.|.+.++ +|.++.+.+.......++.+++.++.+++.||.+||+.+..+....+++...+... + +
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~ 299 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT-----------P-P 299 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh-----------c-h
Confidence 667888776 89999999999999999999999999999999999998877665555554444332 1 1
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012626 332 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK 398 (459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 398 (459)
+.+......++.+.+.+.. .+....+..|..|++.|+++.|+.+...+++..++|.+.|.+.|..|
T Consensus 300 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 300 NFPLFLVLWFAIGVGYGPI-NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1333344444555555433 34446778899999999999999999999999999999999988653
No 48
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=4.6e-32 Score=260.63 Aligned_cols=368 Identities=15% Similarity=0.142 Sum_probs=258.5
Q ss_pred hhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 012626 11 DVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGR 90 (459)
Q Consensus 11 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 90 (459)
........+...+++|.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++++++.+++.|
T Consensus 26 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 105 (471)
T PRK10504 26 TTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLAR 105 (471)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 33334445566778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc
Q 012626 91 ILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 170 (459)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (459)
+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+ .....+..|||+.|++..+...+..+....
T Consensus 106 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~--~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~ 183 (471)
T PRK10504 106 VLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPAL--GGLLVEYASWHWIFLINIPVGIIGAIATLM 183 (471)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHH--HHHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 555556679999999988777666554433
Q ss_pred -cCCChHHHHhhCcHHHHHHHH--------HH-HhCCCc--ccHH-HHH-----------HHHHHHhhcccCCchHHHhc
Q 012626 171 -LPETPNSLIERGKKVEGRRVL--------EK-IRGTKE--VNAE-YQD-----------MVDASELANSIKHPFRNILE 226 (459)
Q Consensus 171 -~~e~p~~l~~~~~~~~~~~~~--------~~-~~~~~~--~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~ 226 (459)
.|+.+. .+.+.+...... .. ..+.+. .... ... ...+....+++..+ .++++
T Consensus 184 ~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 259 (471)
T PRK10504 184 LMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFS-LKLFR 259 (471)
T ss_pred hCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccC-HHHhc
Confidence 455431 111211111000 00 011110 0000 000 00000111111112 23555
Q ss_pred ccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhH
Q 012626 227 RRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGI 305 (459)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 305 (459)
++..... ....+...........+.|++++. .|.++.+.++......++.+++.++.+++.||++||+.+..+..
T Consensus 260 ~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~ 335 (471)
T PRK10504 260 TRTFSLG----LAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTL 335 (471)
T ss_pred ccchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 5553332 222222333345566678888875 89999999999988888899998999999999999999888777
Q ss_pred HHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHH
Q 012626 306 QMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFV 385 (459)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 385 (459)
...+...++.... ...+.+.......+.+.+.+....+. .....+..|++.++.++|+.++...+|..+
T Consensus 336 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i 404 (471)
T PRK10504 336 GLALVSLLFMLVA----------LLGWYYLLPFVLFLQGMVNSTRFSSM-NTLTLKDLPDNLASSGNSLLSMIMQLSMSI 404 (471)
T ss_pred HHHHHHHHHHhcc----------ccccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCHHhccchHHHHHHHHHHHHHH
Confidence 6666655444321 01112222222333334444444443 466678899999999999999999999999
Q ss_pred HHHHHHHHHhhccc
Q 012626 386 IAQIFLTLLCSFKF 399 (459)
Q Consensus 386 ~~~~~~~~~~~~~~ 399 (459)
++.+.|.+.+..++
T Consensus 405 g~~i~g~ll~~~g~ 418 (471)
T PRK10504 405 GVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999887664
No 49
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=1.1e-31 Score=252.72 Aligned_cols=342 Identities=20% Similarity=0.270 Sum_probs=239.2
Q ss_pred cCchhHHHHHHh-----HHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHH--------HHHHHHHHH
Q 012626 27 YDNQGLAAFTSS-----LYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLA--------MLLTGRILL 93 (459)
Q Consensus 27 ~s~~~~~~~~s~-----~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~ 93 (459)
.++++.+.+.+. .+++..+++++.|+++||+|||+++..+.++..++.++++++++++ .+++.|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 556666665543 3334457899999999999999999999999999999999998875 588999999
Q ss_pred hhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc------cccchhHHHHHhhhHHHHHHHHH
Q 012626 94 GVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK------LETWGWRLSLGLAAAPALMMTVG 167 (459)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~------~~~~gwr~~f~~~~~~~~~~~~~ 167 (459)
|++.+...+...+++.|++|+++|++..++...+..+|.++++.++..... .+..+||+.|++.+++.++..+.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887432211 13468999999888777666655
Q ss_pred HhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcc
Q 012626 168 GILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 247 (459)
Q Consensus 168 ~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (459)
...+||+|++..+++ ++++.+.+.++.++++.+ + ++......+.....
T Consensus 187 ~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 234 (394)
T TIGR00883 187 RRNLEETPVFEKAQE------------------------------KHKKKRGPIRETLTKHRK-P-FLLGLGLVIATTTT 234 (394)
T ss_pred HHhcCCChhHHHHHh------------------------------ccccccCCHHHHHHhchH-H-HHHHHHHHHHHHHH
Confidence 566777763211100 011112344455544331 1 22222333333344
Q ss_pred hHHHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHH-HHHHHHhhccCCC
Q 012626 248 INSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV-IVSIILGLKFGPN 325 (459)
Q Consensus 248 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 325 (459)
......+.|.+.+ ++|.++.+.+.......+...++.++.+++.||++||+.+........+... .+....
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------- 307 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL------- 307 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 4556677788874 5889999999999999999999999999999999999877655444333221 111111
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHhhcc-chhHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITV-AVNLFFTFVIAQIFLTLLCSFK-FGIFL 403 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~-~~~~~ 403 (459)
...+.+.......+.+.+.+....+ ..+++.|.+|++.|+++.++.. ....+|..++|.+.|.+.++.+ +...+
T Consensus 308 ---~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 308 ---DSGSFTLFFFLVLGLALIGGMYTGP-MGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIG 383 (394)
T ss_pred ---cCCchHHHHHHHHHHHHHHHHHhhh-HHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHH
Confidence 0112233333344444444444443 4688889999999999999854 4456788899999999999887 55555
Q ss_pred HHHHHHHH
Q 012626 404 FFAGWVTI 411 (459)
Q Consensus 404 ~~~~~~~l 411 (459)
.....+.+
T Consensus 384 ~~~~~~~l 391 (394)
T TIGR00883 384 YYLAALAL 391 (394)
T ss_pred HHHHHHHH
Confidence 54444433
No 50
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=7.8e-32 Score=253.96 Aligned_cols=356 Identities=13% Similarity=0.131 Sum_probs=252.6
Q ss_pred hhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 012626 11 DVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGR 90 (459)
Q Consensus 11 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 90 (459)
+.+.+. .+.+.+++|.|+.+.++..+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++.++++++.+++.|
T Consensus 30 ~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 108 (406)
T PRK15402 30 DMIQPG-MLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLR 108 (406)
T ss_pred hhHhcc-hHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 334443 3456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-h
Q 012626 91 ILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-I 169 (459)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~ 169 (459)
+++|++.+...+...+++.|++|+++|.++.++......+|..++|.+ .....+..+||+.|++.++..++..+.. +
T Consensus 109 ~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 109 FLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLV--GAALIHVLPWRGMFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 999999998888999999999999999999999988888999999988 4444456689999999888877665544 4
Q ss_pred ccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchH
Q 012626 170 LLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGIN 249 (459)
Q Consensus 170 ~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (459)
..||+++.. +.+. +.. +..+.+++.++++..+ ...+..+.......
T Consensus 187 ~~~~~~~~~----~~~~----------------~~~----------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 232 (406)
T PRK15402 187 AMPETAGRV----GEKL----------------SLK----------ELGRDYKLVLKNRRFV----AGALALGLVSLPLL 232 (406)
T ss_pred hCCCCCccc----cccc----------------cHH----------HHHHHHHHHHcCcHHH----HHHHHHHHHHHHHH
Confidence 467765210 0000 000 0011233445444322 22222222222223
Q ss_pred HHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc
Q 012626 250 SILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 328 (459)
Q Consensus 250 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (459)
....+.|.++. .+|+++.+.+.......++.+++.++.+++.||+++|+.+..+.....++...+......
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~-------- 304 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVI-------- 304 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHc--------
Confidence 34455666654 489998888888887888889999999999999999998888777666665555443100
Q ss_pred cchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 012626 329 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGW 408 (459)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (459)
.....++......+.+.+.+....+. .... ...++++++++.+..+....++..+++.+.+.+.+..+........++
T Consensus 305 ~~~~~~~~~~~~~~~g~g~~~~~~~~-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~ 382 (406)
T PRK15402 305 SSHAYLWLTAGLSLYAFGIGLANAGL-YRLT-LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLA 382 (406)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhH-HHHH-hhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHH
Confidence 01122233344444555544433332 2333 233458899999999999999999999999999887775444444443
Q ss_pred HHHHH
Q 012626 409 VTIMT 413 (459)
Q Consensus 409 ~~l~~ 413 (459)
+.++.
T Consensus 383 ~~~~~ 387 (406)
T PRK15402 383 NGLLW 387 (406)
T ss_pred HHHHH
Confidence 33333
No 51
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-34 Score=251.40 Aligned_cols=353 Identities=14% Similarity=0.173 Sum_probs=242.8
Q ss_pred HHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHH
Q 012626 5 LKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLA 84 (459)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
+.+|-||..++...+.+++++|++++..|++.+.+.+.+.+++|++|+++|||+||+++..|..++.++.++++++..||
T Consensus 43 lmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fw 122 (493)
T KOG1330|consen 43 LMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFW 122 (493)
T ss_pred HHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHH
Confidence 45777888888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccc-hhHHHHHhhhHHHHH
Q 012626 85 MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETW-GWRLSLGLAAAPALM 163 (459)
Q Consensus 85 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~-gwr~~f~~~~~~~~~ 163 (459)
+++++|.+.|+|.+...|+++++++|.+|.++|++++++++.+..+|..+|.+.+ ....... .|||.|++.++++++
T Consensus 123 q~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvg--s~va~~~~~Wr~af~~~avl~vi 200 (493)
T KOG1330|consen 123 QVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVG--SVVASLTFWWRWAFRGSAVLGVI 200 (493)
T ss_pred HHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEee--eeeccCccceEEEEEeehHHHHH
Confidence 9999999999999999999999999999999999999999999999999998884 3333332 399999999999998
Q ss_pred HHHHHh-ccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHH---hcccchhHHHHHHHH
Q 012626 164 MTVGGI-LLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNI---LERRNRPQLVMAIFM 239 (459)
Q Consensus 164 ~~~~~~-~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 239 (459)
..++.+ +.+|++| +..++..+ . .+..++....++|+ .|.+... ...+
T Consensus 201 ~~~L~~~f~~eP~r-----ga~~~~~~-------~-------------~~~~~~~ts~~kDl~~l~~~~v~v----~~sl 251 (493)
T KOG1330|consen 201 VGLLVFLFVREPER-----GARDEVDG-------E-------------NKMVKPFTSVWKDLKVLAKIKVFV----LSSL 251 (493)
T ss_pred HHHHHHhhccCccc-----cccccccc-------C-------------CcCCCCccchHHHHHHHHccCcee----eehH
Confidence 877664 4666542 11111000 0 00001111222332 2222222 2222
Q ss_pred HHHhhhcchHHHHHhHHHHHH----hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCc----hhhhhhhHHHHHH-
Q 012626 240 PMFQILTGINSILFYAPVLFQ----SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR----ALLISGGIQMITC- 310 (459)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~----~~~~~~~~~~~~~- 310 (459)
...........+.+|.|.+.. -.|++..+..++..+...++.+|.+++|.++||+.|+ ......-...+.+
T Consensus 252 ~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~ 331 (493)
T KOG1330|consen 252 GIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGA 331 (493)
T ss_pred HHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhh
Confidence 222222233455555554433 3667777888888888999999999999999995331 1111111111111
Q ss_pred ---HHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHH-H
Q 012626 311 ---QVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFV-I 386 (459)
Q Consensus 311 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~ 386 (459)
...+..... ......+..+++..+........+.+. .-+..|..|++.|.++.++...+..+.+-. +
T Consensus 332 ~~s~~~L~~~~~--------~~~~s~~~~~il~~~g~~~~~~~~a~n-~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~ 402 (493)
T KOG1330|consen 332 PLSIPFLFLFPA--------FTSSSMIFGLILFLVGETISWFNWATN-NPIFLEVVPPSRRTTAYALDTVFEHIFGDAAS 402 (493)
T ss_pred hHHHHHHHHHHh--------hhhHHHHHHHHHHHHHHHHHhcccccc-cceeeEecCcccccHHHHHHHHHHHHhccCCC
Confidence 111111110 011222222222223333333333333 455579999999999999998887655544 4
Q ss_pred HHHHHHHHhhc
Q 012626 387 AQIFLTLLCSF 397 (459)
Q Consensus 387 ~~~~~~~~~~~ 397 (459)
|++.|.+.|+.
T Consensus 403 p~ivGilsd~l 413 (493)
T KOG1330|consen 403 PYIVGILSDKL 413 (493)
T ss_pred cceehhHHHHh
Confidence 55999998864
No 52
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=4.3e-31 Score=246.51 Aligned_cols=341 Identities=12% Similarity=0.050 Sum_probs=241.0
Q ss_pred cCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 012626 17 KHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVG 96 (459)
Q Consensus 17 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (459)
..+...+++|.|..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++
T Consensus 28 ~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 107 (381)
T PRK03633 28 LVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIG 107 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34445667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCCh
Q 012626 97 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETP 175 (459)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~p 175 (459)
.+...+...+.+.+..++++|+++++++..+.++|..+|+.++ ....+...|+..+ ..+.......... ...+|++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 184 (381)
T PRK03633 108 CAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLV--SKVSTELMSVLPW-VTGLVLAAILPLLFTRILNQQ 184 (381)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccccccchHHH-HHHHHHHHHHHHHHhcccCCC
Confidence 9988888888888999999999999999999999999999984 4433322222222 2222221111111 1122211
Q ss_pred HHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhH
Q 012626 176 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 255 (459)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (459)
+ +++++.+.++.++++..+.... ..+.....+.....+.
T Consensus 185 ~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l 223 (381)
T PRK03633 185 A-------------------------------------ENHDSTSIWPMLKLRQARLGVN----GCIISGIVLGSLYGLM 223 (381)
T ss_pred C-------------------------------------CCCCCCCHHHHHHhcchHHHHH----HHHHHHHHHHHHHHHH
Confidence 0 0000122334444444222111 1111112234445667
Q ss_pred HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhH
Q 012626 256 PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSIL 335 (459)
Q Consensus 256 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (459)
|.+.++.|.++.+.+.......++.+++++..+++.||+++|+.+..+.....++....... . .
T Consensus 224 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~-------------~-~-- 287 (381)
T PRK03633 224 PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLSQ-------------A-A-- 287 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhhh-------------H-H--
Confidence 88888889998888988889999999999999999999999998877766655544332210 0 1
Q ss_pred HHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHh
Q 012626 336 VVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIF 415 (459)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 415 (459)
......+.+.+.. ...|.....+.|..|+++++...+..+...++|..++|.+.|.+.|+.++...+...+.+.++..+
T Consensus 288 ~~~~~~l~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 288 MAPALFILGAAGF-TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHHHHHHH-hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 1112222222222 233555576778888888888888888889999999999999999999887776666666655554
Q ss_pred hee
Q 012626 416 VYF 418 (459)
Q Consensus 416 ~~~ 418 (459)
..+
T Consensus 367 ~~~ 369 (381)
T PRK03633 367 MLL 369 (381)
T ss_pred HHH
Confidence 433
No 53
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=5.3e-32 Score=257.04 Aligned_cols=380 Identities=14% Similarity=0.063 Sum_probs=247.0
Q ss_pred cCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH----HhHHHHHHHHHH
Q 012626 17 KHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA----ANLAMLLTGRIL 92 (459)
Q Consensus 17 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l 92 (459)
..+.+++ .|+|+++.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.+++++. ++++.+.+.|++
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 127 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFL 127 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHH
Confidence 3455554 59999999999999999999999999999999999999999999999998887764 467788899999
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHH-HHhcc
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTV-GGILL 171 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~-~~~~~ 171 (459)
.|++.+...+.....+.|++|+++|++++++.+.+.++|..+++.+.... .....+||+.|++.++++++..+ ..+++
T Consensus 128 ~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~w~~~f~~~~~~~~i~~~~~~~~~ 206 (438)
T TIGR00712 128 NGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG-MAWFNDWHAALYFPAICAIIVALFAFAMM 206 (438)
T ss_pred HHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998999999999999999999999999999999988773222 22235899999998888777654 44557
Q ss_pred CCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCch-HHHhcccchhHHHHHHHHHHHhhhcchHH
Q 012626 172 PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPF-RNILERRNRPQLVMAIFMPMFQILTGINS 250 (459)
Q Consensus 172 ~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (459)
||+|+....++..++ +++... +..+ +.+.+.+.++.. +..++++. ++...+..++.......
T Consensus 207 ~~~~~~~~~~~~~~~--------~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 269 (438)
T TIGR00712 207 RDTPQSCGLPPIEEY--------RNDYPD--DYNE---KAEQELTAKEIFMQYVLPNKL----LWYIAIANVFVYLLRYG 269 (438)
T ss_pred cCCHHhcCCCCchhc--------cccccc--cccc---ccccccchHHHHHHHHccCch----HHHHHHHHHHHHHHHHH
Confidence 887743211110000 000000 0000 000000000111 12333333 23333333333334456
Q ss_pred HHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcccc
Q 012626 251 ILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 329 (459)
Q Consensus 251 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (459)
...+.|.++++ .|+++.++++......+..+++.++.|++.||+++++....+................ . +
T Consensus 270 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~ 341 (438)
T TIGR00712 270 VLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWM---N-----P 341 (438)
T ss_pred HHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHh---c-----C
Confidence 66788888876 7999999999999999999999999999999996543322332222221111111110 0 0
Q ss_pred chhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHH-HHHHHHHHHHHhhccchhHHHHHHH
Q 012626 330 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT-FVIAQIFLTLLCSFKFGIFLFFAGW 408 (459)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (459)
..+.+.........+.... +..........|.+|++.|+++.|+.+..+++++ .++|.+.|.+.|+.++...+.....
T Consensus 342 ~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~ 420 (438)
T TIGR00712 342 AGNPLVDMICMIVIGFLIY-GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIG 420 (438)
T ss_pred CCchHHHHHHHHHHHHHHc-cHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHH
Confidence 0111211111222222111 1111112345689999999999999999988875 6899999999999888766655444
Q ss_pred HH-HHHHhheeeccCCC
Q 012626 409 VT-IMTIFVYFFLPETK 424 (459)
Q Consensus 409 ~~-l~~~~~~~~~~~~~ 424 (459)
.. +..+......+|+|
T Consensus 421 ~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 421 GSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 33 44444444455544
No 54
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.5e-31 Score=250.81 Aligned_cols=337 Identities=14% Similarity=0.153 Sum_probs=244.1
Q ss_pred hcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 012626 16 KKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGV 95 (459)
Q Consensus 16 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (459)
...|.+++++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|+
T Consensus 26 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 105 (385)
T TIGR00710 26 PAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAF 105 (385)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 34456778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCC
Q 012626 96 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPET 174 (459)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~ 174 (459)
+.+...+...+++.|++|+++|++++++.+....+|..+++.+ .....+..+||+.|++.++..++..+.. ++.||+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (385)
T TIGR00710 106 GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLL--GGYILVWLSWHAIFAFLSLAGILLSALIFFILPET 183 (385)
T ss_pred chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999998 4455556789999999888777665544 446776
Q ss_pred hHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHh
Q 012626 175 PNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY 254 (459)
Q Consensus 175 p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (459)
++.. ++++ .+ +..+.+++.++++..+... +..............+
T Consensus 184 ~~~~----~~~~-----------------~~----------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 228 (385)
T TIGR00710 184 LPYE----ARIQ-----------------IS----------TYFETFLLLLKSKMFWGYA----LIYGASFGGFFAFFSG 228 (385)
T ss_pred CCCc----ccCC-----------------HH----------HHHHHHHHHHcCchhHHHH----HHHHHHHHHHHHHHHc
Confidence 4210 0000 00 0011233444444322222 2222222233445556
Q ss_pred HHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhh
Q 012626 255 APVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 333 (459)
Q Consensus 255 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (459)
.|.+++ ++|.++.+.+.......++.+++.++.+++.||+++|+.+..+.....++...+...... .....
T Consensus 229 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 300 (385)
T TIGR00710 229 APFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAIL--------GLGSW 300 (385)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh--------ccchH
Confidence 676665 589999999999999999999999999999999999998887766666665554433110 00111
Q ss_pred hHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 012626 334 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 399 (459)
........+.+.+.+... +.......|..| +.++++.++.+.....++.+.+.+.+.+.+..++
T Consensus 301 ~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 364 (385)
T TIGR00710 301 AMIIGPMMFVGIGNSMIS-SIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAW 364 (385)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccccChH
Confidence 222222333334344333 333456667776 6789999999999887777777777754443333
No 55
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.6e-32 Score=236.14 Aligned_cols=368 Identities=15% Similarity=0.147 Sum_probs=280.8
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhH
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL 83 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
|.-+|.-=...+...+.+++|+|+|+.|.+++.++..+..++..++.|.+.||+|.|++...+.++..+-++..+++.+.
T Consensus 23 f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~ 102 (417)
T COG2223 23 FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY 102 (417)
T ss_pred HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC
Confidence 34444333445667777889999999999999999999999999999999999999999999999999999999998554
Q ss_pred ---HHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccch---hHHHHHhh
Q 012626 84 ---AMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWG---WRLSLGLA 157 (459)
Q Consensus 84 ---~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~g---wr~~f~~~ 157 (459)
+++++.+++.|++ |+.+.+...++++|+||+++|.++|+.. ..|+|..+...+ .-......+ ||....+.
T Consensus 103 ~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~--~P~v~~~~g~~~w~~~~~i~ 178 (417)
T COG2223 103 PSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLV--APLVAVAFGFLAWRNVAGIY 178 (417)
T ss_pred CchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHH--HHHHHHHHhhHHHHHHHHHH
Confidence 5999999999998 5677999999999999999999999999 788888777666 333334445 99999998
Q ss_pred hHHHHHHHHHH-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccC-CchHHHhcccchhHHHH
Q 012626 158 AAPALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIK-HPFRNILERRNRPQLVM 235 (459)
Q Consensus 158 ~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 235 (459)
.+..++..+.. +.+.|.|+... ..++.+ ...+...+++. .|
T Consensus 179 ~~~l~v~~v~~~~~~~d~p~~r~---------------------------------~~~~~~~~~~~~v~~~~~----~W 221 (417)
T COG2223 179 VVALAIAAVLAWLGMNDVPEHRA---------------------------------SVKPQLPAQLKAVFSNKD----TW 221 (417)
T ss_pred HHHHHHHHHHHHHHhCCChhhhc---------------------------------cccccchhHHHHHhcCcc----hH
Confidence 88888766655 44677662100 000011 23444554554 56
Q ss_pred HHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHH
Q 012626 236 AIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 314 (459)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 314 (459)
.+.+.++..+..+..+..+.|.++++ ++.++.+++.......+.+.+.+.++|+++||+|.++.+...+..++++...+
T Consensus 222 ~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l 301 (417)
T COG2223 222 LLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALL 301 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHH
Confidence 66777777888889999999988876 99999999999999999999999999999999999999988888888877776
Q ss_pred HHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 315 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
...... ..........+........+.+.+...+ +.++...+| ++.|.+.|+...++.+|++.-|...+...
T Consensus 302 ~~~~~~------~~~~~~~~~~~~~~l~l~~~~G~GnGsv-fk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~ 373 (417)
T COG2223 302 SLFLTG------FGHGGSFVVFVAVFLALFVFAGLGNGSV-FKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSL 373 (417)
T ss_pred Hccccc------cccCcchHHHHHHHHHHHHHhccCcchh-eeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHH
Confidence 654210 0001223334444455555556565555 577777777 46788999999999999999999999999
Q ss_pred hhcc-chhHHHHHHHHHHHHHhheeec
Q 012626 395 CSFK-FGIFLFFAGWVTIMTIFVYFFL 420 (459)
Q Consensus 395 ~~~~-~~~~~~~~~~~~l~~~~~~~~~ 420 (459)
+..+ +...+.+...+.+++.+.....
T Consensus 374 ~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 374 DLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988 5555555555555555544333
No 56
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=2e-32 Score=253.60 Aligned_cols=328 Identities=21% Similarity=0.322 Sum_probs=242.7
Q ss_pred CCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccc
Q 012626 20 HENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGF 99 (459)
Q Consensus 20 ~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 99 (459)
.+.+++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++..++++++.+++.|++.|++.+.
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 101 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGF 101 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccccc
Confidence 67788999999999999999999999999999999999999999999999999977777778888999999999999999
Q ss_pred cchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCChHHH
Q 012626 100 GNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSL 178 (459)
Q Consensus 100 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~p~~l 178 (459)
..+...+++.|++|+++|++++++...+.++|.+++|.+ .....+..+||+.|++.+++.++..++. .+++++|+..
T Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l--~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 179 (352)
T PF07690_consen 102 FSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLL--GGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPR 179 (352)
T ss_dssp HHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHH--HHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTT
T ss_pred ccccccccccccchhhhhhhccccccchhhhhhhcccch--hhhhhhccccccccccccchhhhhhhhHhhhhhhccccc
Confidence 999999999999999999999999999999999999999 5666677799999999999988887643 4455444211
Q ss_pred HhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHH
Q 012626 179 IERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVL 258 (459)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (459)
..+++.++. ++.+++.++.++..++++..+ ......+...........+.|.+
T Consensus 180 ~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 232 (352)
T PF07690_consen 180 ERESPKESE-----------------------SKKPKPLKPGFKSLFKNPVLW----ILLIAFFLFFFVFSGFSFFLPLY 232 (352)
T ss_dssp T--SSTTTT-------------------------HHHCCCH-CTHHHHHHCCH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccc-----------------------cccccccccccccccccchhh----hhhhhhhHHHHHHHHhhcccchh
Confidence 111000000 000001111244454444332 22222222333445577778887
Q ss_pred -HHhcCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHH
Q 012626 259 -FQSMGFK-GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILV 336 (459)
Q Consensus 259 -~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (459)
.+.+|++ ..+.+.......+..+++.++.+++.||+++|+..........+..+.+..... .++....
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 302 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPF----------SSSPVWL 302 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHH----------HCHHHHH
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH----------hhhHHHH
Confidence 4558888 688888899999999999999999999999988777766665555554443211 1123333
Q ss_pred HHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHH
Q 012626 337 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 387 (459)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 387 (459)
.....+.+.+.+.. .+....+..|..|+++++++.|+.+...++++.++|
T Consensus 303 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 303 IIALFLIGFGFGIV-FPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHH-CHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 44445555555544 444468889999999999999999999999999887
No 57
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=7.7e-31 Score=242.93 Aligned_cols=329 Identities=22% Similarity=0.312 Sum_probs=270.0
Q ss_pred hcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 012626 16 KKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGV 95 (459)
Q Consensus 16 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (459)
...+...+++|.++.+.+++.+...++..+++++.|+++||+|||+.+..+..+..++.++..+.++++.+++.|++.|+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 99 (352)
T cd06174 20 PALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGL 99 (352)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHc
Confidence 33444556679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCCh
Q 012626 96 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETP 175 (459)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p 175 (459)
+.+...+...+++.|++|+++|++.+++......+|..+++.+ .....+..+||+.+++.++..++..+...+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 174 (352)
T cd06174 100 GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLL--GGLLAESLGWRWLFLILAILGLLLALLLLFLL--- 174 (352)
T ss_pred ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHH--HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 9999999999999999999999999999999999999999999 45555566799999998888777666554432
Q ss_pred HHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhH
Q 012626 176 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 255 (459)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (459)
+.++...+..+...........+.
T Consensus 175 --------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 198 (352)
T cd06174 175 --------------------------------------------------------RLLLLLALAFFLLSFGYYGLLTYL 198 (352)
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHH
Confidence 113333344444555566777788
Q ss_pred HHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCch-hhhhhhHHHHHHHHHHHHHHhhccCCCccccchhh
Q 012626 256 PVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRA-LLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 333 (459)
Q Consensus 256 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (459)
|.+.++ .|.+..+.+.......++..++.++.+++.||++||+ .+..+.....++.+..... ++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------~~~ 265 (352)
T cd06174 199 PLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA-------------PSL 265 (352)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-------------ccH
Confidence 888777 5999999999999999999999999999999999999 8887777777776665543 113
Q ss_pred hHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 012626 334 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMT 413 (459)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 413 (459)
+.......+.+.+.+.. .+....+..|..|+++|++..|+.+....++..+++.+.+.+.+..++...+...++..+++
T Consensus 266 ~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~ 344 (352)
T cd06174 266 ALLLVALLLLGFGLGFA-FPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLA 344 (352)
T ss_pred HHHHHHHHHHHHHHhcc-chhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence 33444444555555533 45557888999999999999999999999999999999999999888887777777777666
Q ss_pred Hhheee
Q 012626 414 IFVYFF 419 (459)
Q Consensus 414 ~~~~~~ 419 (459)
.+....
T Consensus 345 ~i~~~~ 350 (352)
T cd06174 345 ALLLLL 350 (352)
T ss_pred HHHhee
Confidence 665544
No 58
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=7.7e-31 Score=246.90 Aligned_cols=331 Identities=15% Similarity=0.183 Sum_probs=240.5
Q ss_pred CCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccc
Q 012626 19 AHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIG 98 (459)
Q Consensus 19 ~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 98 (459)
+++++++|.++++.+++.+++.++..++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+
T Consensus 30 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 109 (401)
T PRK11043 30 KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVC 109 (401)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHH
Q 012626 99 FGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSL 178 (459)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l 178 (459)
...+...+++.|++|++++++..+.......+|..++|.+ .....+..|||+.|++.++..++..+..++++|+++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 186 (401)
T PRK11043 110 SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLL--GAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKA- 186 (401)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc-
Confidence 8888888999999999999999999998899999999998 4555566799999999888887776666566654410
Q ss_pred HhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHH
Q 012626 179 IERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVL 258 (459)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (459)
++.+ +++.++++.++++..+....... .....+.....+.|.+
T Consensus 187 ---~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~ 229 (401)
T PRK11043 187 ---RKQS------------------------------QDALTFKQLLKSKTYLGNVLIFA----ACSAAFFAWLTGSPFI 229 (401)
T ss_pred ---cccc------------------------------hHHHHHHHHHcChhHHHHHHHHH----HHHHHHHHHHHHhHHH
Confidence 0000 00112334444443222222111 1222334455667888
Q ss_pred HHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHH
Q 012626 259 FQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVV 338 (459)
Q Consensus 259 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (459)
.+++|+++.+.+.......++.+++.+..+++.||+++|+..........++...+...... ..+..+....
T Consensus 230 ~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 301 (401)
T PRK11043 230 LEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLL--------SHPSLVPLLI 301 (401)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHh--------ccCcHHHHHH
Confidence 88899999889988888888899999999999999999887665555444444333222110 0111222223
Q ss_pred HHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 012626 339 VICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 399 (459)
...+.+.+.+... +.......|..| +.++++.|+.+.....++..++.+.+.+.+....
T Consensus 302 ~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~ 360 (401)
T PRK11043 302 PFCVMAAANGAIY-PIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLL 360 (401)
T ss_pred HHHHHHHHHHHHH-HHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChh
Confidence 3333344444333 333344456666 5799999999999999999999999988775433
No 59
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=9.7e-31 Score=245.68 Aligned_cols=351 Identities=14% Similarity=0.084 Sum_probs=238.1
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHH---H-HHhHHHHHHHHHHHhhccc
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA---A-AANLAMLLTGRILLGVGIG 98 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~G~~~~ 98 (459)
+++|.|+.+.|++.+.+.++..+++++.|+++||+||||++..+.++.+++++++. + .++++.+++.|+++|++.+
T Consensus 41 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~ 120 (402)
T TIGR00897 41 KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYP 120 (402)
T ss_pred HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchH
Confidence 56799999999999999999999999999999999999999999999999877653 2 2578889999999999988
Q ss_pred ccchhhhHHHHhccCCCcchHHHHHHHHHHHHHH-HHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCChH
Q 012626 99 FGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGI-FTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPN 176 (459)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~p~ 176 (459)
...+...+.+.+++|+++|++++++...+.++|. +++|++ .....+..||+..++......++..+.. ++.++.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~--~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (402)
T TIGR00897 121 LFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY--SSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT 198 (402)
T ss_pred HHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 8878888889999999999999999999999997 578887 4444555676665555443333333322 33444321
Q ss_pred HHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHH
Q 012626 177 SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 256 (459)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (459)
+++.++ +. +.. +.++.++++++++. ++...+..++..........+.|
T Consensus 199 ----~~~~~~----------~~----~~~----------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p 246 (402)
T TIGR00897 199 ----PQHMQT----------RE----KFS----------ELGKAATILFTNPN----VLLGGMVRIINTIGLFGFAVFLP 246 (402)
T ss_pred ----cccccC----------Cc----chh----------hHHHHHHHHHcChh----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 00 000 00112334454443 22222333334445566777889
Q ss_pred HHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhh-hhHHHHHHHHHHHHHHhhccCCCccccchhhhH
Q 012626 257 VLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLIS-GGIQMITCQVIVSIILGLKFGPNQELSKSFSIL 335 (459)
Q Consensus 257 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (459)
.+.+++|+++.+.+.......++.+++.+..|+++||++||+.+.. +.....++...+...... ..+..+.
T Consensus 247 ~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~--------~~~~~~~ 318 (402)
T TIGR00897 247 MFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH--------FGHSFAV 318 (402)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc--------cCCcHHH
Confidence 8888899999998888888999999999999999999998887642 222222222222211100 0111222
Q ss_pred HHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHh
Q 012626 336 VVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIF 415 (459)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 415 (459)
......+.+.+.+. ..+. .....|..| ++|+++.|+.+....+++.++|.+.+.+.+..++...+...+++.+++.+
T Consensus 319 ~~~~~~~~G~~~~~-~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~ 395 (402)
T TIGR00897 319 ALIIAIALGIFLAG-YVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAF 395 (402)
T ss_pred HHHHHHHHHHHHHH-HHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 33333444444432 2333 244556555 68999999999999999999999999999998876666666555555444
Q ss_pred hee
Q 012626 416 VYF 418 (459)
Q Consensus 416 ~~~ 418 (459)
...
T Consensus 396 ~~~ 398 (402)
T TIGR00897 396 LTA 398 (402)
T ss_pred HHH
Confidence 433
No 60
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.1e-30 Score=245.44 Aligned_cols=341 Identities=14% Similarity=0.126 Sum_probs=234.7
Q ss_pred hhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 012626 13 YLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRIL 92 (459)
Q Consensus 13 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 92 (459)
......+++.+++|.+.++.++..+.+.++++++++++|+++||+|||++++.+.++++++++++++++|++.++++|++
T Consensus 34 ~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 113 (413)
T PRK15403 34 LIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFI 113 (413)
T ss_pred hhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 33344455778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHH-Hhcc
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG-GILL 171 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~ 171 (459)
+|++.+...+...+++.|++|+++|++++++......+|..+||+++ ....+..|||+.|++.++..++..+. .+++
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg--~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~l 191 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSG--AALMHFVHWKVLFAIIAVMGLIAFVGLLLAM 191 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99998876777788899999999999999999999999999999984 44445679999999998887776654 3457
Q ss_pred CCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHH
Q 012626 172 PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSI 251 (459)
Q Consensus 172 ~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (459)
||+++. +++.. + . +...+.+++.++++. ++...+...........+
T Consensus 192 p~~~~~---~~~~~---------------~--~----------~~~~~~~~~ll~~~~----~~~~~l~~~~~~~~~~~~ 237 (413)
T PRK15403 192 PETVKR---GAVPF---------------S--A----------KSVLRDFRNVFRNRL----FLTGAATLSLSYIPMMSW 237 (413)
T ss_pred CCCccc---cCCCC---------------C--h----------HHHHHHHHHHHcCHH----HHHHHHHHHHHHHHHHHH
Confidence 887521 00000 0 0 000112344555544 233333333333344555
Q ss_pred HHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc
Q 012626 252 LFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 330 (459)
Q Consensus 252 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (459)
..+.|.++++ .|+++.+.++.......+.+++..+.+++.++..+++..........++..++...... ..
T Consensus 238 ~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~--------~~ 309 (413)
T PRK15403 238 VAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLL--------WP 309 (413)
T ss_pred HHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHH--------cc
Confidence 5667877776 69999999998888888888888888877655444444322222223333222221100 01
Q ss_pred hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 012626 331 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 399 (459)
+..+......++.+.+.+...... .... ..-....+|++.++.+.....+...++...+++.+....
T Consensus 310 ~~~~~~~~~~~l~~~G~~~~~p~~-~~~a-l~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~ 376 (413)
T PRK15403 310 HVWLWSVLGTSLYAFGIGLIFPTL-FRFT-LFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGR 376 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHhHHH-HHHH-hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 112222334444455544443332 2111 111223479999999999999999999999988766443
No 61
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=5.4e-31 Score=246.58 Aligned_cols=348 Identities=13% Similarity=0.102 Sum_probs=243.1
Q ss_pred hhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 012626 14 LKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILL 93 (459)
Q Consensus 14 ~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 93 (459)
.+......++++|+|+.+.|++.+...+...+.+++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++
T Consensus 30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 109 (400)
T PRK11646 30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILS 109 (400)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 33444445678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHH-HhccC
Q 012626 94 GVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG-GILLP 172 (459)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~-~~~~~ 172 (459)
|++.+...+...+++.|++|+++|++++++.....++|..+||.++ .... ..|||+.|++.++..++..+. .++.|
T Consensus 110 g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~--g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~ 186 (400)
T PRK11646 110 GLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLG--SWLL-QYDFRLVCATGAVLFVLAAAFNAWLLP 186 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999888899999999999999999999999999999999999995 3333 468999999988777665443 34455
Q ss_pred CChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHH
Q 012626 173 ETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSIL 252 (459)
Q Consensus 173 e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (459)
|.+. ++.+ ++.+..+++.++++....... ..+..........
T Consensus 187 ~~~~-----~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 228 (400)
T PRK11646 187 AYKL-----STVR-----------------------------TPVREGMTRVLRDKRFVTYVL----TLTGYYMLAVQVM 228 (400)
T ss_pred cccc-----cccc-----------------------------hhhHHHHHHHHcCchHHHHHH----HHHHHHHHHHHHH
Confidence 5320 0000 000112344444443221111 1111111222334
Q ss_pred HhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccch
Q 012626 253 FYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKS 331 (459)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (459)
.+.|.+.++.+.++.+.+.......+....+....+++.|| .+.++.+..+....+++...+... +
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-------------~ 295 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-------------S 295 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-------------h
Confidence 56788877765577788888777777666655555666554 555655555555555554443322 1
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc----chhHHHHHH
Q 012626 332 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK----FGIFLFFAG 407 (459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~ 407 (459)
+.+.......+.+.+.+.. .|...+++.+..|+++|+++.|+.+....+|..++|.+.|.+.|+.+ ....+....
T Consensus 296 ~~~~~~~~~~l~~~g~~~~-~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~ 374 (400)
T PRK11646 296 NLQQLFTLICLFYIGSIIA-EPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLG 374 (400)
T ss_pred hHHHHHHHHHHHHHHHHHH-HccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHH
Confidence 1222223333344444333 33445777899999999999999999999999999999999998753 234444444
Q ss_pred HHHHHHHhh
Q 012626 408 WVTIMTIFV 416 (459)
Q Consensus 408 ~~~l~~~~~ 416 (459)
+..+.+.+.
T Consensus 375 ~~~~~~~~~ 383 (400)
T PRK11646 375 IIGLITLLA 383 (400)
T ss_pred HHHHHHHHH
Confidence 444444433
No 62
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=7.1e-31 Score=246.36 Aligned_cols=328 Identities=16% Similarity=0.192 Sum_probs=230.6
Q ss_pred cCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 012626 17 KHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVG 96 (459)
Q Consensus 17 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (459)
..|.+.+++|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.++..++.+++.++++++.+++.|+++|++
T Consensus 25 ~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~ 104 (392)
T PRK10473 25 GLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIG 104 (392)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 34556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCCh
Q 012626 97 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETP 175 (459)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~p 175 (459)
.+...+...+++.|++|+++|+++.++.+....+|..++|.+ +....+..+||+.|++.++..++..+.. +++||++
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i--~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVL--GHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999899999999999999999999999999999999999988 4444455689999999888777665543 5567764
Q ss_pred HHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhH
Q 012626 176 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 255 (459)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (459)
+.. ++. + . . ..+..++.++++..........+ ..........+.
T Consensus 183 ~~~---~~~-~--------------~-~-------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 226 (392)
T PRK10473 183 PAR---APA-A--------------S-S-------------KPRENSESLLNRFFLSRLVITTL----SVTVILTFVNTS 226 (392)
T ss_pred Ccc---cCC-c--------------c-c-------------hHHHHHHHHhCHHHHHHHHHHHH----HHHHHHHHHHhC
Confidence 110 000 0 0 0 00011122333322211111111 111122333444
Q ss_pred HHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhh
Q 012626 256 PVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 334 (459)
Q Consensus 256 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (459)
|.+.. ++|+++.+.+......+++.+++.++.+++.||++||+.+..+.....++.+.+.... . .+
T Consensus 227 ~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~------------~-~~ 293 (392)
T PRK10473 227 PVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP------------S-HA 293 (392)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH------------H-HH
Confidence 55544 5899988889889999999999999999999999999998888776666665554431 1 11
Q ss_pred HHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 012626 335 LVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGI 401 (459)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 401 (459)
.......+...+.+..... ....+..|.++|+ |.......++..+++.+.+.+.+..++..
T Consensus 294 ~~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~ 354 (392)
T PRK10473 294 VSLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISA 354 (392)
T ss_pred HHHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 2222223333333333222 2223455544443 44455566777788888888887777654
No 63
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=3.4e-30 Score=241.25 Aligned_cols=354 Identities=12% Similarity=0.092 Sum_probs=234.9
Q ss_pred hhhhhcCCCCCCccccCchhHHHHHHhHHH-HHHHhhhhhhhhhhhccchhHH-HHHHHHHHHHHHHHHHHHhHHHHHHH
Q 012626 12 VYLKKKHAHENNYCKYDNQGLAAFTSSLYL-AGLVASFVASPVTRDYGRRASI-ICGGISFLLGAALNAAAANLAMLLTG 89 (459)
Q Consensus 12 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (459)
...+.....+++++|+|++++|++.+...+ +..++.++.++ +||+||||.+ ..+.++.+++..+.+++++++.+++.
T Consensus 33 ~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 111 (393)
T PRK15011 33 LQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFV 111 (393)
T ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 334555556788999999999999877655 55566655555 9999998864 55666667888888899999988766
Q ss_pred HHHHhhcccccchhhhHHHHhccCCCcc--hHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHH
Q 012626 90 RILLGVGIGFGNQAVPLYLSEMAPTHLR--GGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG 167 (459)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~ 167 (459)
+.+.|...+...|...+++.|+.++++| +...++.+.+.++|.++||++ +....+..|||..|++.++..++..+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i--~~~l~~~~gw~~~f~~~~~~~~~~~~~ 189 (393)
T PRK15011 112 GVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL--AYALAMGFSFTVMYLSAAVAFIVCGVM 189 (393)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH--HHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 6555544566778888888898876655 345578889999999999999 555566679999999988887766555
Q ss_pred H-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhc
Q 012626 168 G-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILT 246 (459)
Q Consensus 168 ~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (459)
. +++||+++. ++ ++. ++ .+.. .++++ ..+...... .....
T Consensus 190 ~~~~~~~~~~~----~~-~~~---------------------------~~-~~~~---~~~~~--~~~~~~~~~-~~~~~ 230 (393)
T PRK15011 190 VWLFLPSMRKE----LP-LAT---------------------------GT-LEAP---RRNRR--DTLLLFVIC-TLMWG 230 (393)
T ss_pred HHhhcCccCCC----Cc-ccc---------------------------cc-cccc---ccccc--cHHHHHHHH-HHHHH
Confidence 4 457876510 00 000 00 0000 01111 111111111 11222
Q ss_pred chHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 247 GINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
.+..+..+.|.++++ +|+++.+.+.......+..+++.++.|+++||++||+.+..+.....+....+...
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------- 302 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA-------- 302 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH--------
Confidence 334455567777654 89998888888887778888899999999999999987766544433332222111
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 405 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 405 (459)
++.+..+....+.....+..... ...+..|..|+ +++++.++.+...++|..++|.+.|.+.+..++...+..
T Consensus 303 -----~~~~~~l~~~~l~~~~~g~~~~~-~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~ 375 (393)
T PRK15011 303 -----HSPAILLGLQLLNAIYIGILGGI-GMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWF 375 (393)
T ss_pred -----hhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 11222222222222222222222 23556788885 599999999999999999999999999998888877777
Q ss_pred HHHHHHHHHhheeeccC
Q 012626 406 AGWVTIMTIFVYFFLPE 422 (459)
Q Consensus 406 ~~~~~l~~~~~~~~~~~ 422 (459)
..++.+++++.++..||
T Consensus 376 ~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 376 ALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 77777777777666654
No 64
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1.1e-30 Score=244.04 Aligned_cols=325 Identities=17% Similarity=0.190 Sum_probs=227.6
Q ss_pred CCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccc
Q 012626 19 AHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIG 98 (459)
Q Consensus 19 ~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 98 (459)
+.+.+++|+|+.+.+++.+.+.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+
T Consensus 15 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~ 94 (377)
T PRK11102 15 PVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAA 94 (377)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCChHH
Q 012626 99 FGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNS 177 (459)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~p~~ 177 (459)
...+...+++.|++|+++|++++++......+|..++|.+ .....+..+||+.|++.+++.++..+.. +++||+++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (377)
T PRK11102 95 AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPII--GGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPK 172 (377)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCcc
Confidence 9999999999999999999999999999999999999998 4555556789999999888877665444 557776421
Q ss_pred HHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHH
Q 012626 178 LIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV 257 (459)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (459)
++++ +. +.++ ...++++.++++.. +...+..............+.|.
T Consensus 173 ----~~~~-------------~~--~~~~----------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 219 (377)
T PRK11102 173 ----ERRQ-------------PF--HLRT----------TIRNFASLFRHKRV----LGYMLASGFSFAGMFSFLTAGPF 219 (377)
T ss_pred ----cccC-------------CC--ChHH----------HHHHHHHHHcChHH----HHHHHHHHHHHHHHHHHHHcCHH
Confidence 0000 00 0000 01122334444332 12222222223333444445555
Q ss_pred HH-HhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHH
Q 012626 258 LF-QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILV 336 (459)
Q Consensus 258 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (459)
++ +.+|+++.+.+.......++.+++.++.+++.||+++|+.+..+.....+..+.+..... .+...+..
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 290 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSAL---------LDLGFWAL 290 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH---------HhhhHHHH
Confidence 54 448999999999999999999999999999999999999888777654443333222210 01112222
Q ss_pred HHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHH-HHHHHHHHH
Q 012626 337 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL-FFTFVIAQI 389 (459)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~ 389 (459)
.....+.....+... +.......|..| +.++++.++.+.... ++..+++.+
T Consensus 291 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 291 VVGVAAFVGCVSMIS-SNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHHHHHHHHHHHhh-HHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 222222332232222 222345567666 789999998877654 444444544
No 65
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=2.4e-30 Score=241.58 Aligned_cols=347 Identities=12% Similarity=0.064 Sum_probs=241.4
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccc
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFG 100 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 100 (459)
..++++.++.+.+++.+.+.+++.++++++|+++||+|||++++.+.++.++++++++++.+. ++.|+++|++.+..
T Consensus 29 ~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~ 105 (393)
T PRK11195 29 LLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAY 105 (393)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 356788899999999999999999999999999999999999999999999999888877664 78899999999999
Q ss_pred chhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHh
Q 012626 101 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIE 180 (459)
Q Consensus 101 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~ 180 (459)
.|...+++.|++|+++|++++++.+....+|.++||.++ +...+. .|+..+.+.+...++..+..+.+||+|+....
T Consensus 106 ~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lg--G~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 182 (393)
T PRK11195 106 SPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLG--GALADP-HAEAALAVCALIYLLAALFNLFIPRLGARRPG 182 (393)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Confidence 999999999999999999999999999999999999995 333332 47777777666555555555668887532100
Q ss_pred hCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHH
Q 012626 181 RGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ 260 (459)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (459)
++ ++..+. ..+. +...+.+++++..+...+...+... ......+..|.+.+
T Consensus 183 ~~--~~~~~~-------------~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 233 (393)
T PRK11195 183 QS--WNPIAL-------------LRDF----------FHACRVLWRDKLGRFSLAGTTLFWG----AGATLRFLVLAWAP 233 (393)
T ss_pred cC--CCHHHH-------------HHHH----------HHHHHHHHhCchhHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 00 000000 0000 0112344555443333322222111 22333344455555
Q ss_pred h-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHH
Q 012626 261 S-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVV 339 (459)
Q Consensus 261 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (459)
+ +|.++.+.+......+++.+++.+..+++.||.++++.+..+.. .++....+... ++.+.....
T Consensus 234 ~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~-------------~~~~~~~~~ 299 (393)
T PRK11195 234 VALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQ-------------HSLLPAYPL 299 (393)
T ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHH-------------hHHHHHHHH
Confidence 4 89999999999999999999999999999999888877665532 22222222211 222333334
Q ss_pred HHHHHHHHhhcccccccccccccCChhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhee
Q 012626 340 ICLFVLAFGWSWGPLGWTVPSEIFPLET-RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYF 418 (459)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 418 (459)
..+.+.+.+....+. .+...+..|++. +|++.++.+...+++..++..+.+.+ +..+-...+.+..++.+.+.....
T Consensus 300 ~~~~G~~~g~~~~~~-~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 300 LILIGALGGFFVVPM-NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHHHHHhhhhhhhhH-HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 444555555444444 455667666554 79999999999999999999998855 677766666666666555554433
No 66
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-31 Score=248.21 Aligned_cols=269 Identities=18% Similarity=0.183 Sum_probs=213.8
Q ss_pred CCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcc
Q 012626 18 HAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGI 97 (459)
Q Consensus 18 ~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 97 (459)
...+.+|.+....+.+.+.++++++++++.+++|.+.||++..+.+....+++++..++....+|++.+++.|++.|+.+
T Consensus 69 l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 69 LSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFE 148 (495)
T ss_pred HcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 33467899999999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred cccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc----cccchhHHHHHhhhHHHHHHHHHH-hccC
Q 012626 98 GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK----LETWGWRLSLGLAAAPALMMTVGG-ILLP 172 (459)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~----~~~~gwr~~f~~~~~~~~~~~~~~-~~~~ 172 (459)
++.+|....+++.|+.++||+..++++.+..++|.++|++++++... ....||||.|++.++++++..++. +++|
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 99999999999999999999999999999999999999999877443 223689999999999998887665 5589
Q ss_pred CChH--HHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHH
Q 012626 173 ETPN--SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINS 250 (459)
Q Consensus 173 e~p~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (459)
+.|. +..++++++-..+..++..... ..++.++..+++.++.+. ++...++.++.....+.
T Consensus 229 ~~P~~~~fl~~~ek~~~~~~~~~~~~~~-------------~~~~~~~~~~~~a~~dp~----vw~~~l~~~~~~lv~~~ 291 (495)
T KOG2533|consen 229 DNPSKAWFLTDEEKELVVERLRESPSGG-------------IENKFKWKGFKEALKDPG----VWPFSLCYFFLKLVNYG 291 (495)
T ss_pred CChhhccccchHHHHHHHHHHHhccCCC-------------cccccCHHHHHHHHhchh----HHHHHHHHHHHhhcccc
Confidence 9985 2222221111111111000000 000012234455555555 66777777778888889
Q ss_pred HHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----CCchhhhhh
Q 012626 251 ILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKL----GRRALLISG 303 (459)
Q Consensus 251 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----~~~~~~~~~ 303 (459)
+.+|.|.++++ .|++..++..+.++..++++++.+++|+++||. .+|......
T Consensus 292 ~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~ 349 (495)
T KOG2533|consen 292 FSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVF 349 (495)
T ss_pred HHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999998 679999999999999999999999999999994 444444433
No 67
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.98 E-value=3.4e-30 Score=243.53 Aligned_cols=346 Identities=14% Similarity=0.090 Sum_probs=239.1
Q ss_pred CCCccccCchh-----HHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 012626 21 ENNYCKYDNQG-----LAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGV 95 (459)
Q Consensus 21 ~~~~~~~s~~~-----~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (459)
..+++|++..+ .|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|+
T Consensus 40 ~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 119 (408)
T PRK09874 40 YVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGL 119 (408)
T ss_pred HHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34557777654 4899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCC
Q 012626 96 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPET 174 (459)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~ 174 (459)
+.+ ..+....++.|++|+++|+++.++...+..+|.+++|.+ .....+..+||+.|++.++..++..+.. +++||+
T Consensus 120 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 120 LGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLA--GGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 855 567788899999999999999999999999999999998 4555556789999999888877665544 446665
Q ss_pred hHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHh
Q 012626 175 PNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY 254 (459)
Q Consensus 175 p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (459)
++.. ++++ ..+. + ...+.++++.. ........+...........+
T Consensus 197 ~~~~----~~~~-----------------~~~~----------~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T PRK09874 197 FQPV----SKKE-----------------MLHM----------R-EVVTSLKNPKL---VLSLFVTTLIIQVATGSIAPI 241 (408)
T ss_pred cccc----cchh-----------------hhHH----------H-HHHHhCcCCch---HHHHHHHHHHHHHHHHHHHHH
Confidence 3100 0000 0000 0 01112222221 111111111111122333444
Q ss_pred HHHHHHhcCCCCch----hHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc
Q 012626 255 APVLFQSMGFKGDA----SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 330 (459)
Q Consensus 255 ~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (459)
.+.+..+.+.+..+ .+......+++.+++.+..|++.||++||+.+..+.....++.+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~------------- 308 (408)
T PRK09874 242 LTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV------------- 308 (408)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh-------------
Confidence 55555553322222 3445556677888888899999999999998887766555444433322
Q ss_pred hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 012626 331 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 410 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (459)
+..+.......+.+.+.+... +...+...+..|++.+++.+++.+.+..+|..++|.+.|.+.+..++...+...+++.
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~ 387 (408)
T PRK09874 309 QTPLQLGILRFLLGAADGALL-PAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVV 387 (408)
T ss_pred ccHHHHHHHHHHHHhhhHhhH-HHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHH
Confidence 112333333344444444333 3334556677888999999999999999999999999999999989887777777666
Q ss_pred HHHHhhee
Q 012626 411 IMTIFVYF 418 (459)
Q Consensus 411 l~~~~~~~ 418 (459)
+++.+...
T Consensus 388 l~~~~~~~ 395 (408)
T PRK09874 388 LFNAVYSW 395 (408)
T ss_pred HHHHHHHH
Confidence 66555543
No 68
>PRK10054 putative transporter; Provisional
Probab=99.98 E-value=1.8e-30 Score=242.56 Aligned_cols=351 Identities=9% Similarity=0.023 Sum_probs=246.3
Q ss_pred hhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 012626 12 VYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRI 91 (459)
Q Consensus 12 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 91 (459)
...+...+..++++|+|..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+++++++.+++.|+
T Consensus 25 ~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (395)
T PRK10054 25 ATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFA 104 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 33444555567789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hc
Q 012626 92 LLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-IL 170 (459)
Q Consensus 92 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~ 170 (459)
+.|.+.+...+...++..|..|+++|++++++.....++|.+++|+++... .. .+||..|++.++..++..+.. ++
T Consensus 105 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l--~~-~g~~~~f~~~~~~~~i~~i~~~~~ 181 (395)
T PRK10054 105 LINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL--VM-QSINLPFWLAAICSAFPLVFIQIW 181 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-hccCcHHHHHHHHHHHHHHHHHHH
Confidence 999888888888999999999999999999999999999999999995433 32 589999999888777665444 44
Q ss_pred cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHH
Q 012626 171 LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINS 250 (459)
Q Consensus 171 ~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (459)
+||+++. ++.++ + + ....++.++++..+......++..+ ....
T Consensus 182 ~~~~~~~----~~~~~----------------------~--~-----~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~ 224 (395)
T PRK10054 182 VQRSEKA----IATET----------------------G--S-----VWSPSVLLQDKALLWFTCSGFLASF----VSGA 224 (395)
T ss_pred Hhccccc----cccch----------------------h--h-----hhhhhhhccCceehHHHHHHHHHHH----HHHH
Confidence 5554310 00000 0 0 0011334444443322222222121 1222
Q ss_pred HHHhHHHHH---HhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcc
Q 012626 251 ILFYAPVLF---QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 327 (459)
Q Consensus 251 ~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (459)
...+.+.+. ++.+.+....+.......+.........+++.||.++|+.+..+.....++...+....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------- 295 (395)
T PRK10054 225 FASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG--------- 295 (395)
T ss_pred hhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc---------
Confidence 222333333 23455556667777777777777778889999999999988877766666655443321
Q ss_pred ccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 012626 328 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAG 407 (459)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (459)
++.+.......+.+.+.. ...|.....+.+..|++.++++.+..+ ...+|..++|.+.|.+.|+.++...+...+
T Consensus 296 ---~~~~~~~~~~~~~~~g~~-~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~ 370 (395)
T PRK10054 296 ---NSLLLWGMSAAVFTVGEI-IYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILA 370 (395)
T ss_pred ---hHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHH
Confidence 122223333344444433 223444567788899999999988755 677999999999999999998876666655
Q ss_pred HHHHHHHhh
Q 012626 408 WVTIMTIFV 416 (459)
Q Consensus 408 ~~~l~~~~~ 416 (459)
++...+.+.
T Consensus 371 ~~~~~~~~~ 379 (395)
T PRK10054 371 LAIVAAWLL 379 (395)
T ss_pred HHHHHHHHH
Confidence 555444444
No 69
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=4.3e-30 Score=242.45 Aligned_cols=352 Identities=12% Similarity=0.103 Sum_probs=241.4
Q ss_pred hhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHH---HHHHhHHHHH
Q 012626 11 DVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALN---AAAANLAMLL 87 (459)
Q Consensus 11 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~~~~~~l~ 87 (459)
+.......|.+++++|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++++++ .++++++.++
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll 121 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFL 121 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 3444445566788999999999999999999999999999999999999999999999999999886 4678999999
Q ss_pred HHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc---------------c---c--
Q 012626 88 TGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKL---------------E---T-- 147 (459)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~---------------~---~-- 147 (459)
++|+++|+|.+...+..+.++.|+.|+++|.+.+++.+..+.+|..+++.++...... + .
T Consensus 122 ~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~ 201 (438)
T PRK10133 122 VGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYK 201 (438)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHH
Confidence 9999999999999999999999988887777789999999999999999884322100 0 0
Q ss_pred ----chhHHHHHhhh-HHHHHHHHH-HhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCch
Q 012626 148 ----WGWRLSLGLAA-APALMMTVG-GILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPF 221 (459)
Q Consensus 148 ----~gwr~~f~~~~-~~~~~~~~~-~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (459)
.+||++|+... +..++..+. ...+||.+. +++.+ +...+.....
T Consensus 202 ~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~~~~~--------------------------~~~~~~~~~~ 251 (438)
T PRK10133 202 HSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----DNHSD--------------------------AKQGSFSASL 251 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----ccccc--------------------------ccccchhhhH
Confidence 25777776433 333333322 223454321 00000 0000001223
Q ss_pred HHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHH-HHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchh
Q 012626 222 RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVL-FQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRAL 299 (459)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 299 (459)
+++++++..+...+.. ++..........|.+.+ .++ +|+++.+++.......++.++|+++.+++.||+++|+.
T Consensus 252 ~~ll~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~ 327 (438)
T PRK10133 252 SRLARIRHWRWAVLAQ----FCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKV 327 (438)
T ss_pred HHHHhCchHHHHHHHH----HHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 4555555433222222 22222333344455545 454 89999999999999999999999999999999999998
Q ss_pred hhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHH
Q 012626 300 LISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVN 379 (459)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 379 (459)
+..+..+..+.+.+.... + . . .......+.+++.+..+++. ++...|..|+ ..+++.++.. ..
T Consensus 328 l~~~~~~~~~~~~~~~~~-----------~-~-~-~~~~~~~l~glg~~~i~P~~-~s~a~~~~~~-~~~~as~l~~-~~ 390 (438)
T PRK10133 328 LAAYALIAMALCLISAFA-----------G-G-H-VGLIALTLCSAFMSIQYPTI-FSLGIKNLGQ-DTKYGSSFIV-MT 390 (438)
T ss_pred HHHHHHHHHHHHHHHHHc-----------C-C-h-HHHHHHHHHHHHHHHHHHHH-HHHHHcccch-hhccchhHHh-HH
Confidence 887766555444333221 1 1 1 22334455566666555444 5776777775 4677888776 45
Q ss_pred HHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHH
Q 012626 380 LFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIMT 413 (459)
Q Consensus 380 ~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 413 (459)
.+|+.++|.+.|.+.|..+ ....+.+..++.+..
T Consensus 391 ~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~ 425 (438)
T PRK10133 391 IIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI 425 (438)
T ss_pred hccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 5788999999999999876 444554444444333
No 70
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=9.9e-30 Score=243.33 Aligned_cols=360 Identities=13% Similarity=0.127 Sum_probs=247.3
Q ss_pred cCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc-----cchhH-HHHHHHHHHHHHHHHHHH---HhHHHHH
Q 012626 17 KHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-----GRRAS-IICGGISFLLGAALNAAA---ANLAMLL 87 (459)
Q Consensus 17 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~-~~~~~~~~~~~~~~~~~~---~~~~~l~ 87 (459)
..+...++.|.|.+++|.+ +...+.+ ++.+++|+++||+ ||||. +..+.+..+++...+++. ++++.+.
T Consensus 34 ~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~ 111 (491)
T PRK11010 34 TLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLA 111 (491)
T ss_pred HHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHH
Confidence 3333445568899999986 4444444 6889999999999 99885 667777777777777775 4788999
Q ss_pred HHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc-cchhHHHHHhhhHHHHHHHH
Q 012626 88 TGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE-TWGWRLSLGLAAAPALMMTV 166 (459)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~-~~gwr~~f~~~~~~~~~~~~ 166 (459)
+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+ .....+ ..|||..|++.++..++..+
T Consensus 112 ~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l--~~~l~~~~~GWr~~f~i~a~l~ll~~l 189 (491)
T PRK11010 112 ALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGL--ALWLADRYLGWQGMYWLMAALLIPCII 189 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHH--HHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988 444445 46999999999888777766
Q ss_pred HHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhc
Q 012626 167 GGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILT 246 (459)
Q Consensus 167 ~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (459)
..+++||+++.. ++.++ . + +....++++.++++..+......+ ....
T Consensus 190 ~~~~~~e~~~~~---~~~~~----------------~-~---------~~~~~~l~~~~~~~~~~~~ll~~~----l~~~ 236 (491)
T PRK11010 190 ATLLAPEPTDTI---PVPKT----------------L-E---------QAVVAPLRDFFGRNNAWLILLLIV----LYKL 236 (491)
T ss_pred HHHhcCCCcccc---ccccc----------------h-h---------hhHHHHHHHHHcCcCHHHHHHHHH----HHHH
Confidence 666678865210 00000 0 0 000123445554443222222221 1112
Q ss_pred chHHHHHhHHHH-HHhcCCCCchhHHHHH-HHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCC
Q 012626 247 GINSILFYAPVL-FQSMGFKGDASLYSSA-MTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGP 324 (459)
Q Consensus 247 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (459)
.......+.+.+ .++.|++..+.+.... ...++.+++.+++|+++||+++|+.+..+....++..+.+.....
T Consensus 237 ~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~----- 311 (491)
T PRK11010 237 GDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSI----- 311 (491)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 222333344444 4568999999998874 556799999999999999999988776655554444433222110
Q ss_pred CccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 012626 325 NQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLF 404 (459)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 404 (459)
..++.+......++...+.+...... +++..+..+++.+++..|+.+....+|..+++.+.|.+.|..||...+.
T Consensus 312 ----~~~~~~~l~~~~~l~~~~~g~~~~~~-~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~ 386 (491)
T PRK11010 312 ----TDKNLYSMGAAVFFENLCGGMGTAAF-VALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYL 386 (491)
T ss_pred ----ccccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Confidence 00112222222222222222222222 4666788898899999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHhheeeccCC
Q 012626 405 FAGWVTIMTIFVYFFLPET 423 (459)
Q Consensus 405 ~~~~~~l~~~~~~~~~~~~ 423 (459)
+..++.+.+++.....+++
T Consensus 387 ~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 387 FSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 8888887777776666543
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=1.2e-29 Score=234.72 Aligned_cols=328 Identities=16% Similarity=0.123 Sum_probs=232.8
Q ss_pred hcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 012626 16 KKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGV 95 (459)
Q Consensus 16 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (459)
...|.+++++|+|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ .+++++.+++.|++.|+
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~ 99 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGV 99 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHH
Confidence 34556788999999999999999999999999999999999999999999999988888877 78899999999999999
Q ss_pred cccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCCh
Q 012626 96 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETP 175 (459)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p 175 (459)
+.+...+....++.|++| ++|++++++.+.+.++|..+++.+..........+||+.|.+.++..++... .++|+.+
T Consensus 100 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~~~~~~ 176 (355)
T TIGR00896 100 GIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--AWIPQVR 176 (355)
T ss_pred HHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--HHhhhhc
Confidence 999888888889999986 6899999999999999999998884322211112499999877665443322 2344432
Q ss_pred HHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhH
Q 012626 176 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 255 (459)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (459)
+ +.+. +++..+...++.+|++.. +...+..+.....+.....+.
T Consensus 177 ~----~~~~----------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l 220 (355)
T TIGR00896 177 R----RVAA----------------------------NQTTTRLTPVRIWRSPLA----WQVTVFFGLQSGLYYSLIGWL 220 (355)
T ss_pred c----ccCC----------------------------CCCCCCCCCchhhcCHhH----HHHHHHHHHHHHHHHHHHHHH
Confidence 1 0000 000001223344444332 222222233333445566788
Q ss_pred HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhC-CchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhh
Q 012626 256 PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLG-RRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 334 (459)
Q Consensus 256 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (459)
|.++++.|++..+.+...+...++.++++++.|++.||++ ||+.+..+....+++.+.+.... .+ .
T Consensus 221 p~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~- 287 (355)
T TIGR00896 221 PAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP-----------MH-G- 287 (355)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh-----------hh-H-
Confidence 8888889999999999999999999999999999999994 55566666555555554444321 11 1
Q ss_pred HHHHHHHHHHHHHhhccccccccccc-ccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012626 335 LVVVVICLFVLAFGWSWGPLGWTVPS-EIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK 398 (459)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 398 (459)
... ...+.+.+.+... +.....+. +..+++.++...++.+.+++++..++|.+.|.+.|+.+
T Consensus 288 ~~~-~~~l~g~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 288 LWA-WALVLGLGQGGAF-PLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHH-HHHHHHHhhhhHh-HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 2333444443333 22233333 33456778999999999999999999999999999876
No 72
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=5.5e-30 Score=238.48 Aligned_cols=343 Identities=13% Similarity=0.114 Sum_probs=229.7
Q ss_pred HHHhhhhhhhhhhcCCC-CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH-
Q 012626 4 FLKKFFHDVYLKKKHAH-ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA- 81 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~- 81 (459)
+...|......+...+. +++++|+|+.+.+++.+.+.+++++++++.|+++||+|||+.+..+.++..++.+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~ 89 (366)
T TIGR00886 10 FFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ 89 (366)
T ss_pred HHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34445555556666664 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc--------ccchhHHH
Q 012626 82 NLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKL--------ETWGWRLS 153 (459)
Q Consensus 82 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~--------~~~gwr~~ 153 (459)
+++.+++.|+++|++.+ ..+...+++.|++|+++|++++++.....++|..+++.++...... ...+||+.
T Consensus 90 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~ 168 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWA 168 (366)
T ss_pred hHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccch
Confidence 99999999999999865 4567889999999999999999999977777777766653221110 13479999
Q ss_pred H-HhhhHHHHHHH-HHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchh
Q 012626 154 L-GLAAAPALMMT-VGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRP 231 (459)
Q Consensus 154 f-~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (459)
| +..++...+.. +...+.+|+|+.. ++++ +.. ..+. ... .+++......+.++++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~-----~~~~-~~~---------~~~~~~~~~~~~~~~~~~- 227 (366)
T TIGR00886 169 FVIVPAGILLLPALLIFFVGADTPPGK----PATG-KLS-----FKGA-RWS---------VGTGALGDQLKVFRDRHT- 227 (366)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCccc----ccch-hcc-----cccc-ccc---------ccchhHHHHHHHHhccch-
Confidence 9 44455544443 3344567765211 0000 000 0000 000 000000122334444432
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHH
Q 012626 232 QLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITC 310 (459)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 310 (459)
+...+..+...........+.|.++++ +|+++.+.+.......+..+++.++.+++.||+++|+....+......+
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 228 ---WILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMG 304 (366)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHH
Confidence 222222333333445566677777765 8999999998888999999999999999999999988777666655554
Q ss_pred HHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHH
Q 012626 311 QVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFF 382 (459)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 382 (459)
..++.... .++.+.+.......+.....+..... .+....+..| +++++++|+.+..+++|
T Consensus 305 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 305 AFLVVLGL---------VSPLSLAVFIVLFVALFFFSGAGNGS-TFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHhcC---------CCcchHHHHHHHHHHHHHHhccccch-hhhcchhhch-hhcccHHHHHHHhccCC
Confidence 44443321 00002222233333334444444333 3577778877 68999999999887765
No 73
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=2.6e-29 Score=235.07 Aligned_cols=346 Identities=12% Similarity=0.079 Sum_probs=243.0
Q ss_pred hhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH---HHhHHHHHHH
Q 012626 13 YLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA---AANLAMLLTG 89 (459)
Q Consensus 13 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~ 89 (459)
......+.+++++|+|+.+.|++.+.+++++.+++++.|++.||+|||+++..+.++++++.+++.. .++++.+++.
T Consensus 21 ~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~ 100 (410)
T TIGR00885 21 ITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVG 100 (410)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 3344556678999999999999999999999999999999999999999999999999999988654 3589999999
Q ss_pred HHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc------------------------
Q 012626 90 RILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKL------------------------ 145 (459)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~------------------------ 145 (459)
|++.|+|.|...+..+.++.++.|+++|++.+++.+...++|..++|.++......
T Consensus 101 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (410)
T TIGR00885 101 LFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHS 180 (410)
T ss_pred HHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999885433211
Q ss_pred ccchhHHHHHhhhHHHHHHHHHHhc--cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHH
Q 012626 146 ETWGWRLSLGLAAAPALMMTVGGIL--LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRN 223 (459)
Q Consensus 146 ~~~gwr~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (459)
+..+||++|++.+++.++..+...+ .||.++ + ++ ++...+.+.++
T Consensus 181 ~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~--~~--------------------------~~~~~~~~~~~ 227 (410)
T TIGR00885 181 DLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----S--DA--------------------------KQISFSASLSR 227 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----c--cc--------------------------ccccchhhHHH
Confidence 1246999999988877765544433 343220 0 00 00000112334
Q ss_pred HhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhh
Q 012626 224 ILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSM--GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLI 301 (459)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 301 (459)
.+|++..+. ..+..+...........+.+.+.++. +.+....+...........+|+++++++.||+++|+.+.
T Consensus 228 ~~~~~~~~~----~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~ 303 (410)
T TIGR00885 228 LARIRHYRE----GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLM 303 (410)
T ss_pred HHhChhHHH----HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 444444332 22223333333444556667666654 333344454566666788999999999999999999887
Q ss_pred hhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHH
Q 012626 302 SGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLF 381 (459)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 381 (459)
+......+..++.... + .........+.+++.+..+ |..++...+..+++.+..+.++.... +
T Consensus 304 i~~~~~~~~~ll~~~~-------------~-~~~~~~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~~l~~~~--~ 366 (410)
T TIGR00885 304 AYAIIGMALCLGSIFA-------------G-GHVGLYCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAAGLVMAI--I 366 (410)
T ss_pred HHHHHHHHHHHHHHHc-------------C-ChHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHHHHHHHH--h
Confidence 7766666655555442 1 1123444555556666566 55577878888877655555555544 9
Q ss_pred HHHHHHHHHHHHHhhc------cchhHHHHHHHHHHH
Q 012626 382 FTFVIAQIFLTLLCSF------KFGIFLFFAGWVTIM 412 (459)
Q Consensus 382 g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~ 412 (459)
|+++.|++.|.+.|.. +....+++...|.+.
T Consensus 367 Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 367 GGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred ccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 9999999999999954 354555554444433
No 74
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=6e-29 Score=231.89 Aligned_cols=340 Identities=13% Similarity=0.076 Sum_probs=244.4
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHH----HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhc
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASI----ICGGISFLLGAALNAAAANLAMLLTGRILLGVG 96 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (459)
..+++|.|..++|++.+.+.+...++++++|+++||+|||+.. ..+..+..+ ..+..+++++.+++.|.++|.+
T Consensus 30 ~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~ 107 (382)
T TIGR00902 30 WLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFALF 107 (382)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHH
Confidence 3456899999999999999999999999999999999985433 222222222 3445678999999999999999
Q ss_pred ccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChH
Q 012626 97 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPN 176 (459)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~ 176 (459)
.+...|...++..|+ +++|+++++......++|.+++|++ +....+..|||..|++.++..++..+ .+.++|+++
T Consensus 108 ~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l--~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~ 182 (382)
T TIGR00902 108 FSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSAL--FGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTIP 182 (382)
T ss_pred HccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHH--HHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCCC
Confidence 998899998888765 4778999999999999999999998 56666778999999887655333333 333344320
Q ss_pred HHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHH
Q 012626 177 SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 256 (459)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (459)
. +++.++ ++.+.....++.+|++.. +...+..+...........+.|
T Consensus 183 ~---~~~~~~--------------------------~~~~~~~~~~~~l~~~~~----~~~l~~~~l~~~~~~~~~~~~~ 229 (382)
T TIGR00902 183 P---KDAIPE--------------------------DESQGDSAFIALLKNPMN----LRFLAAVCLIQGAHAAYYGFSA 229 (382)
T ss_pred C---Cccccc--------------------------cccccchhHHHHHcChHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000 000111234556555542 2233333333344556666778
Q ss_pred HHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHH
Q 012626 257 VLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILV 336 (459)
Q Consensus 257 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (459)
.++++.|.++.+.+.......++.+++..+.+++.||+++|+.+..+.....+....+... ++.+..
T Consensus 230 ~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~ 296 (382)
T TIGR00902 230 IYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI-------------EAFPLI 296 (382)
T ss_pred HHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH-------------hhHHHH
Confidence 8888899999999999999999999999999999999999999988888888777666543 334555
Q ss_pred HHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHh
Q 012626 337 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVA-VNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIF 415 (459)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 415 (459)
+....+.+..++...... ..++++. |++.+++++++++. ...+|..+++.+.|.+.|+.++..++..+. ..+.+.+
T Consensus 297 ~~~q~l~g~~~~~~~~~~-~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~-~~~~~~~ 373 (382)
T TIGR00902 297 FLLQILHCGTFAVCHLAA-MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAI-IAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH-HHHHHHH
Confidence 556677777777665554 5777777 98999999999874 567999999999999999998754444444 4444443
Q ss_pred h
Q 012626 416 V 416 (459)
Q Consensus 416 ~ 416 (459)
.
T Consensus 374 ~ 374 (382)
T TIGR00902 374 L 374 (382)
T ss_pred H
Confidence 3
No 75
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=7.8e-29 Score=232.73 Aligned_cols=329 Identities=16% Similarity=0.176 Sum_probs=232.6
Q ss_pred CCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcc
Q 012626 18 HAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGI 97 (459)
Q Consensus 18 ~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 97 (459)
.+.+.+++|+|+.+.+++.+.+.++..++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++.
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 110 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGT 110 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhh
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHH-HHhccCCChH
Q 012626 98 GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTV-GGILLPETPN 176 (459)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~-~~~~~~e~p~ 176 (459)
+...+....+..|.+++++|+++.++...+..+|..++|.+ .....+..|||+.|++.++..++..+ ..++.||+++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i--~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 111 GVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLI--GGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 88888888899999999999999999999999999999998 44455567899999998877665544 3455787652
Q ss_pred HHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHH
Q 012626 177 SLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 256 (459)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (459)
.. +++++ .+..+++.++++..+...... +........+..+.+
T Consensus 189 ~~---~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 231 (394)
T PRK11652 189 AD---ARRTR------------------------------VLASYRTLLSNRRFNCYLLML----IGTLAGIAVFEACSG 231 (394)
T ss_pred cc---cchhH------------------------------HHHHHHHHHcChHHHHHHHHH----HHHHHHHHHHHHhCh
Confidence 10 00000 012233444444333222221 112222333444455
Q ss_pred HHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhH
Q 012626 257 VLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSIL 335 (459)
Q Consensus 257 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (459)
.++++ +|.++.+.++......++.+++..+.+++.||.+++... ......++.+.+...... ...+.+.
T Consensus 232 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------~~~~~~~ 301 (394)
T PRK11652 232 VLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPGWF--------GVMNVWT 301 (394)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHh--------ccccHHH
Confidence 56665 899988889888888888889999999999998833222 222222222221111000 0112233
Q ss_pred HHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012626 336 VVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 397 (459)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 397 (459)
......+.+.+.+... +....+..|..| +.++++.++.+....+|+.+++.+.+.+.+..
T Consensus 302 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 302 LLVPAALFFFGAGMLF-PLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 3344444555555433 333566678777 57899999999999999999999988876543
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=2.1e-28 Score=229.96 Aligned_cols=363 Identities=9% Similarity=0.031 Sum_probs=238.2
Q ss_pred hhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 012626 11 DVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGR-RASIICGGISFLLGAALNAAAANLAMLLTG 89 (459)
Q Consensus 11 ~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Gr-r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (459)
..+.+...+.+++++|++..|+|++.+++.++..++++++|.++||+|| |+++.++.++..++..+..+.++++.+++.
T Consensus 19 ~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (418)
T TIGR00889 19 GSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPV 98 (418)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 4555667777788899999999999999999999999999999999965 788898899888888888899999999999
Q ss_pred HHHHhhcccccchhhhHHHH--------hccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHH
Q 012626 90 RILLGVGIGFGNQAVPLYLS--------EMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPA 161 (459)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~ 161 (459)
|++.|++.+...+...++.. |......|.|.+| .+|.+++|.++ ........|+ +|++.++..
T Consensus 99 ~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~--g~l~~~~~~~-~f~~~~~~~ 169 (418)
T TIGR00889 99 LLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAV--SLLDIELSNI-QLYITAGSS 169 (418)
T ss_pred HHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHH--HHhcccchhH-HHHHHHHHH
Confidence 99999988777776665543 2232334555555 35677777773 2222222354 455666666
Q ss_pred HHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHH
Q 012626 162 LMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPM 241 (459)
Q Consensus 162 ~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (459)
++..+..+++||+|+. +++++. .. . +..+...++.+|++.........++
T Consensus 170 ~~~~~~~~~~~e~~~~---~~~~~~----------------~~---~------~~~~~~~~~~~k~~~~~~~~~~~~~-- 219 (418)
T TIGR00889 170 ALLGVFALTLPDIPVA---KSTAKM----------------SI---K------VMLGLDAFILFKNKRMAIFFFFSML-- 219 (418)
T ss_pred HHHHHHHhcCCCCCCC---cccccc----------------CH---H------HHhhhhHHHHhcCCCeeeHHHHHHH--
Confidence 6555555678887621 000000 00 0 0001122344455443222222222
Q ss_pred HhhhcchHHHHHhHHHHHHhcCCCC--------chhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHH
Q 012626 242 FQILTGINSILFYAPVLFQSMGFKG--------DASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 313 (459)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 313 (459)
..........+.+.+.++.|.++ ...+.......+..+++.+..+++.||+|+|+.+..+.+...++...
T Consensus 220 --~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l 297 (418)
T TIGR00889 220 --LGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGF 297 (418)
T ss_pred --HHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 22222334455566666666543 55688888999999999999999999999999998888877666554
Q ss_pred HHHHHhhccCCCccccch-hhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHH-HHHHHHHHHHHHHHH
Q 012626 314 VSIILGLKFGPNQELSKS-FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITV-AVNLFFTFVIAQIFL 391 (459)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~~ 391 (459)
+.... +.. ..+......++.+.+.+.. .+....++.|.+|++.|++++|+.+ ....+|.+++|.+.|
T Consensus 298 ~~~~~----------~~~~~~~~l~l~~~l~g~~~~~~-~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G 366 (418)
T TIGR00889 298 FAYGD----------PEYFGYALLFLSMIVYGCAFDFF-NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSG 366 (418)
T ss_pred HHHcC----------cchhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44320 001 1122333344444444433 3333567789999999999999997 567899999999999
Q ss_pred HHHhhcc------chhHHHHHHHH-HHHHHhheeeccCCCC
Q 012626 392 TLLCSFK------FGIFLFFAGWV-TIMTIFVYFFLPETKG 425 (459)
Q Consensus 392 ~~~~~~~------~~~~~~~~~~~-~l~~~~~~~~~~~~~~ 425 (459)
.+.|+.+ |...+...+++ .+.+++.+++++|+++
T Consensus 367 ~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 367 VMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999853 55555444444 4455555566666543
No 77
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=4.6e-28 Score=229.16 Aligned_cols=356 Identities=12% Similarity=0.058 Sum_probs=219.5
Q ss_pred hhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHH---HHH-----hHH
Q 012626 13 YLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA---AAA-----NLA 84 (459)
Q Consensus 13 ~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~~~-----~~~ 84 (459)
+.+.....+++++|+|+.+.|++.+.+.++..++++++|+++||+|||++++++..+.+++..... .++ ...
T Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (420)
T PRK09528 29 WFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILL 108 (420)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555556777999999999999999999999999999999999999999887666555443221 111 111
Q ss_pred HHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHH
Q 012626 85 MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMM 164 (459)
Q Consensus 85 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~ 164 (459)
..++++++.|.+.....+....+..+. .+++++.++......++|..++|+++. ...+ .+|++.|++.++++++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g--~l~~-~~~~~~f~~~~~~~~~~ 183 (420)
T PRK09528 109 GAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAG--ILFN-INPQINFWLGSGSALIL 183 (420)
T ss_pred HHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHH--HHHh-cCchHhHHHHHHHHHHH
Confidence 223334444444333333333333222 345677888888889999999999843 3333 37999999988888776
Q ss_pred HHHHhcc-CCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHh
Q 012626 165 TVGGILL-PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQ 243 (459)
Q Consensus 165 ~~~~~~~-~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (459)
.+..++. +|.++....+++ ++ .++++...+..++.+|++..+...+......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~-~~------------------------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~-- 236 (420)
T PRK09528 184 LVLLFFAKPDAPSTAKVANA-LG------------------------ANASAVSLKDALALLKLPKFWFLVLYVIGVA-- 236 (420)
T ss_pred HHHHhcccccccchhhhccc-hh------------------------cccccccHHHHHHHccCCCeEeehHHHHHHH--
Confidence 6666554 333310000000 00 0000000111233444444332222211111
Q ss_pred hhcchHHHHHhHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHh
Q 012626 244 ILTGINSILFYAPVLFQS----MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (459)
..+.....+.|.++.+ .+.+..+.+.......+...++.++.|++.||+++|+.+..+..+..+...++.+.
T Consensus 237 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-- 312 (420)
T PRK09528 237 --CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-- 312 (420)
T ss_pred --HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc--
Confidence 1122222233444332 35566677888888889999999999999999999999888777766665554432
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHhhcc
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSI-TVAVNLFFTFVIAQIFLTLLCSFK 398 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~ 398 (459)
++.+..+....+.+........ ....++.|.+|++.+++..+. .+....+|.++++.+.|.+.|..|
T Consensus 313 -----------~~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G 380 (420)
T PRK09528 313 -----------TGPLEVSILKLLHAFEVPFLLV-GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG 380 (420)
T ss_pred -----------ccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 1223333333333333332222 224677788899999988766 577788999999999999999999
Q ss_pred chhHHHHHHHHHHHHHhh
Q 012626 399 FGIFLFFAGWVTIMTIFV 416 (459)
Q Consensus 399 ~~~~~~~~~~~~l~~~~~ 416 (459)
+...+...+++.++..+.
T Consensus 381 ~~~~f~~~~~~~~i~~~~ 398 (420)
T PRK09528 381 FQGTYLILGGIVLLFTLI 398 (420)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 877777655555444333
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=1.4e-27 Score=222.83 Aligned_cols=337 Identities=11% Similarity=0.069 Sum_probs=231.6
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccch----hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcc
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRR----ASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGI 97 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 97 (459)
.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .......+++++.+++.|++.|++.
T Consensus 31 l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~ 108 (382)
T PRK11128 31 LKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFF 108 (382)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHH
Confidence 356799999999999999999999999999999999984 3333222222 2233344688999999999999999
Q ss_pred cccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHH
Q 012626 98 GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNS 177 (459)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~ 177 (459)
+...+...+++.++ +++|+++.+......++|.++||++ +....+..|||..|++.++..++..+...+.||.++
T Consensus 109 ~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~l--gg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~- 183 (382)
T PRK11128 109 SPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSAL--TGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMP- 183 (382)
T ss_pred cccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHH--HHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCC-
Confidence 98999888888877 4568888899999999999999999 666667779999999877655544444444555321
Q ss_pred HHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHH
Q 012626 178 LIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPV 257 (459)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (459)
+++.+ +..++.+.++++++|++..+......++ ..........+.|.
T Consensus 184 ---~~~~~--------------------------~~~~~~~~~~~~i~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~ 230 (382)
T PRK11128 184 ---QGESR--------------------------QQESAGWPAWKALLKEPTVWRFLLCVSL----LQGSHAAYYGFSAI 230 (382)
T ss_pred ---ccccc--------------------------cccccccchHHHHHcChhHHHHHHHHHH----HHHHhHhHHHHHHH
Confidence 00000 0000112345666666553332222222 22233444555666
Q ss_pred HHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHH
Q 012626 258 LFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVV 337 (459)
Q Consensus 258 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (459)
+.++.|.++.+.+.......+..++..++.+++.||+++|+.+..+....+++.+.+... ++.+..+
T Consensus 231 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~ 297 (382)
T PRK11128 231 YWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST-------------TALPWLI 297 (382)
T ss_pred HHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-------------hhHHHHH
Confidence 777889998899999898889999999999999999999999888777766665544332 2344444
Q ss_pred HHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHH-HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 012626 338 VVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAV-NLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTI 414 (459)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 414 (459)
...++.+.+.+...... ..+..+. +++++++..+..+.. ..+|..++|.+.|.+.|..+... +...+.+.+.++
T Consensus 298 ~~~~l~g~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~~-~~~~~~~~~~~~ 372 (382)
T PRK11128 298 VIQILHCGTFTVCHLAA-MRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAGV-FWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHH
Confidence 55555555555443333 4555665 556678888888744 56777899999999999988643 333444444443
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=1.1e-27 Score=225.10 Aligned_cols=359 Identities=14% Similarity=0.100 Sum_probs=237.0
Q ss_pred hhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc-----cchh-HHHHHHHHHHHHHHHHHHH---
Q 012626 10 HDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-----GRRA-SIICGGISFLLGAALNAAA--- 80 (459)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~-~~~~~~~~~~~~~~~~~~~--- 80 (459)
+..+.....|..-++.|+|.+++|++..+... .+..+++|+++||+ |||| .+..+.++.+++..+.++.
T Consensus 14 ~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~ 91 (402)
T PRK11902 14 PLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPH 91 (402)
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCcc
Confidence 33333333333334459999999999777776 58999999999999 8875 7888888888888887776
Q ss_pred HhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHhhhH
Q 012626 81 ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAA 159 (459)
Q Consensus 81 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~-~gwr~~f~~~~~ 159 (459)
++++.+++..++.++..+...++..+++.|++|++||+++.++...+.++|.++++.+ .....+. .|||..|++.++
T Consensus 92 ~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l--~~~l~~~~~gw~~~f~i~a~ 169 (402)
T PRK11902 92 AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGL--ALWLADRVLGWGNTYLLMAG 169 (402)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHH--HHHHHhcccCHHHHHHHHHH
Confidence 4578888888888988898999999999999999999999999999999999999988 4444443 589999999888
Q ss_pred HHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHH
Q 012626 160 PALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFM 239 (459)
Q Consensus 160 ~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (459)
..++..+..+++||+++.. ++.++. . ++.++.+++++|++..+.......+
T Consensus 170 ~~l~~~l~~~~~~e~~~~~---~~~~~~--------------------~------~~~~~~~~~l~~~~~~~~~l~~~~l 220 (402)
T PRK11902 170 LMLAGALTTLWAPEPEVPA---RPPRSL--------------------G------EAVVGPLRDFFSRRGAWALLLLIVL 220 (402)
T ss_pred HHHHHHHHHHhcCCCcccc---cccchh--------------------H------HHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 8776666556677765210 000000 0 0011234556666654433333222
Q ss_pred HHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHH-HHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHH
Q 012626 240 PMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTG-AVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIIL 318 (459)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (459)
...... .......+++.+++|+++.+.++.....+ ++.+++.++++++.||+++|+.+..+.....+..+.+....
T Consensus 221 ~~~~~~---~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~ 297 (402)
T PRK11902 221 YKLGDA---FAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLA 297 (402)
T ss_pred HHhHHH---HHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222111 11122334455568999988888876554 46889999999999999999887766655554443332211
Q ss_pred hhccCCCccccchhhhHHHHHHHH----HHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 319 GLKFGPNQELSKSFSILVVVVICL----FVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
. ..++.+.......+ .+...+ ...+....++.+.+|.+. .++.+....++...++.+.|.+.
T Consensus 298 ~---------~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~ 363 (402)
T PRK11902 298 V---------TPKHLWTMALAIGIENLCGGMGTA-AFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLV 363 (402)
T ss_pred h---------cCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01112222222211 122222 223333456667767554 45555566677777778999999
Q ss_pred hhccchhHHHHHHHHHHHHHhhee
Q 012626 395 CSFKFGIFLFFAGWVTIMTIFVYF 418 (459)
Q Consensus 395 ~~~~~~~~~~~~~~~~l~~~~~~~ 418 (459)
|..|+...+...+++.+.++++..
T Consensus 364 ~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 364 EAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHH
Confidence 999998888887777766665543
No 80
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=2.8e-27 Score=225.61 Aligned_cols=336 Identities=15% Similarity=0.125 Sum_probs=227.1
Q ss_pred cCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhh----ccch-hHHHHHHHHHHHHHHHHHHHHh------HHH
Q 012626 17 KHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGRR-ASIICGGISFLLGAALNAAAAN------LAM 85 (459)
Q Consensus 17 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr----~Grr-~~~~~~~~~~~~~~~~~~~~~~------~~~ 85 (459)
..+...+++|+++.++|++.++..+..++..|+.|+++|| +||| +.++.+....+++.+++.+.++ ...
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3334566789999999999999999999999999999997 6874 5677888888888888877654 457
Q ss_pred HHHHHHHHhhcccccchhhhHHHHhcc-CCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc-----cccchhHHHHHhhhH
Q 012626 86 LLTGRILLGVGIGFGNQAVPLYLSEMA-PTHLRGGLNMMFQLATTLGIFTANMINYGTQK-----LETWGWRLSLGLAAA 159 (459)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~-----~~~~gwr~~f~~~~~ 159 (459)
+++.+++.+++.+...+...++..|.. +++||++..++.+.+..+|..+++.+...... .+..+||+.+++.++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~ 181 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLAL 181 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHH
Confidence 778889999998888888888999988 46899999999998888887766554221111 134689999999988
Q ss_pred HHHHHHHHH-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHH
Q 012626 160 PALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIF 238 (459)
Q Consensus 160 ~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (459)
++++..+.. ++.||+++. .+.++ +++.+.++.++++++++..+. ..
T Consensus 182 l~~~~~~~~~~~~~e~~~~----~~~~~-------------------------~~~~~~~~~~~~l~~~~~~~~----~~ 228 (437)
T TIGR00792 182 IGVVSLIICFFGTKERYSE----IPKNI-------------------------EKKLSLKQIFKALFKNDQLLI----LC 228 (437)
T ss_pred HHHHHHHHHHcCCEecCCC----CCccc-------------------------ccCCCHHHHHHHHhCCHHHHH----HH
Confidence 887776554 446765410 00000 000001122334444443222 22
Q ss_pred HHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHH
Q 012626 239 MPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 317 (459)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (459)
+..+...........+.+++.+. .+ ++...+.......++.+++.++.+++.||+|+|+.+..+..+..++.+.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 307 (437)
T TIGR00792 229 LAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA 307 (437)
T ss_pred HHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 22222222333333344555443 34 45566667777789999999999999999999999888877666665544332
Q ss_pred HhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCC-------hhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012626 318 LGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIF 390 (459)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~ 390 (459)
.++.+.......+.+.+.+... +..+++.+|..+ ++.+|.+.|+.+....++..+++.+.
T Consensus 308 ------------~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 308 ------------GSNLPLILVLIILAGFGQNFVT-GLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122333333344444444333 344566677654 45689999999999999999999999
Q ss_pred HHHHhhccc
Q 012626 391 LTLLCSFKF 399 (459)
Q Consensus 391 ~~~~~~~~~ 399 (459)
|.+.+..|+
T Consensus 375 g~ll~~~G~ 383 (437)
T TIGR00792 375 GLILGIIGY 383 (437)
T ss_pred HHHHHHcCC
Confidence 999987765
No 81
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1e-28 Score=232.92 Aligned_cols=380 Identities=18% Similarity=0.214 Sum_probs=276.0
Q ss_pred CCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHhhc
Q 012626 18 HAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGR-ILLGVG 96 (459)
Q Consensus 18 ~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r-~l~G~~ 96 (459)
.+.++++++.+.++++|+.++..-...+.+++.+.+.||+|.|++.+.|.++..++.++.++++++|++++.- ++.|+|
T Consensus 69 ~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G 148 (509)
T KOG2504|consen 69 FEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLG 148 (509)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhcc
Confidence 3456778899999999999999999999999999999999999999999999999999999999999888766 899999
Q ss_pred ccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhcc-CCCh
Q 012626 97 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL-PETP 175 (459)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~-~e~p 175 (459)
.|..+..+...+..++ +|+|+.+.|+...+.++|.++-|++ .-...+..|||+.+++.+.+.+-.++....+ |.++
T Consensus 149 ~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l--~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 149 LGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPL--LKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSP 225 (509)
T ss_pred chhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHH--HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 9999999999999888 5779999999999999999999988 6677778899999999888876665555443 3232
Q ss_pred HHHHhhCcHHHHHHHHHH------------HhCCCcccH-----HHHHHHHHHHhhc--ccCCch----HHHhcccchhH
Q 012626 176 NSLIERGKKVEGRRVLEK------------IRGTKEVNA-----EYQDMVDASELAN--SIKHPF----RNILERRNRPQ 232 (459)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~------------~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~ 232 (459)
+.... .++..+.... ....+.... +.....+..++.+ ..+... .+++++ +
T Consensus 226 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~----~ 298 (509)
T KOG2504|consen 226 PKKPN---EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKD----P 298 (509)
T ss_pred CCCch---hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcC----c
Confidence 11000 0000000000 000000000 0000000000000 111111 244444 3
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchh--hhhhhHHHHHH
Q 012626 233 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRAL--LISGGIQMITC 310 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~~~~~~~ 310 (459)
.++.+.+...+...++.....++|.+.+..|++..+++.+.+..++..++++++.|++.|+...++. ..++.+..+++
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 4666667777777788888889999999999999999999999999999999999999999874443 33344444433
Q ss_pred HHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012626 311 QVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF 390 (459)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 390 (459)
.+..... ...+.......+++.+.+ .+..+....+.|+.+.++-..+.|+...+..++..++|++.
T Consensus 379 ~~~~p~~-------------~~~~~l~~~~~~fG~~~g-~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPia 444 (509)
T KOG2504|consen 379 RLFLPFA-------------TTYVGLIVFSILFGFCVG-SFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIA 444 (509)
T ss_pred HHHHHHh-------------ccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccc
Confidence 3222222 122333333444444444 44444446778999999999999999999999999999999
Q ss_pred HHHHhhcc-chhHHHHHHHHHHHHHhheeecc
Q 012626 391 LTLLCSFK-FGIFLFFAGWVTIMTIFVYFFLP 421 (459)
Q Consensus 391 ~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 421 (459)
|.+.|..+ |...+.+.+++.+.+..+++..+
T Consensus 445 g~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 445 GLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999887 88888888888888887777776
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=5.9e-27 Score=249.26 Aligned_cols=349 Identities=12% Similarity=-0.013 Sum_probs=232.2
Q ss_pred HHhhhhhhhhhhcCCCCCCccccC--chhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHH---H
Q 012626 5 LKKFFHDVYLKKKHAHENNYCKYD--NQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA---A 79 (459)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~ 79 (459)
+..+.+..+.....+....+++.+ ....+++.+++.+++.++++++|+++||+|||++++++.++.++..++.. .
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~ 99 (1146)
T PRK08633 20 LNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY 99 (1146)
T ss_pred HhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334433333333333333334444 34579999999999999999999999999999999998877666655543 4
Q ss_pred HHhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc-------cchhHH
Q 012626 80 AANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE-------TWGWRL 152 (459)
Q Consensus 80 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~-------~~gwr~ 152 (459)
+++++.++++|+++|++.+...++..+++.|++|+++|++++++...+.++|.++|++++....... ..+|++
T Consensus 100 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~ 179 (1146)
T PRK08633 100 LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIA 179 (1146)
T ss_pred HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchH
Confidence 5789999999999999999999999999999999999999999999999999999999954333220 123444
Q ss_pred HHHhhhHHH-HHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchh
Q 012626 153 SLGLAAAPA-LMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRP 231 (459)
Q Consensus 153 ~f~~~~~~~-~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (459)
.+.+..+.. ++.+++.+.+||+|+....+++.++ . .. .......++.+++++..+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~----~~----------~~~~~~~~~~l~~~~~~~ 235 (1146)
T PRK08633 180 PAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK----------Y----LF----------PKLLWRNLKLLRSDRVLW 235 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccc----------c----cc----------HHHHHHHHHHHhcCcHHH
Confidence 444443333 3334444567887632111000000 0 00 000011233444444322
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhHHHHHH-hcCCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHH
Q 012626 232 QLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGD-ASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMIT 309 (459)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 309 (459)
.. .+..+...........+.|.++. .+|++.. ..+++.....++.+++.++.+++.||.++++.+.++.++.++
T Consensus 236 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 236 LA----IIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLAL 311 (1146)
T ss_pred HH----HHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHH
Confidence 22 22222222233344555666655 4899988 889999999999999999999999999998888777666666
Q ss_pred HHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHH
Q 012626 310 CQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQI 389 (459)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 389 (459)
+.+++... .+.+..++..++.+++.+....+. .+++.+..|++.|++++|+.+.+..++..+++.+
T Consensus 312 ~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~ 377 (1146)
T PRK08633 312 SLFLLPTA-------------PSLASVLVLFFLFGFSAGLFIVPL-NALIQFRAPEKELGKVLAANNFLQNVGMLLFLAL 377 (1146)
T ss_pred HHHHHHHh-------------hhHHHHHHHHHHHHHHHHHhhHHH-HHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHH
Confidence 55554432 123333444445555555444443 5777899999999999999999999998887777
Q ss_pred HHHHHh
Q 012626 390 FLTLLC 395 (459)
Q Consensus 390 ~~~~~~ 395 (459)
.+.+..
T Consensus 378 ~~~l~~ 383 (1146)
T PRK08633 378 TTLFSG 383 (1146)
T ss_pred HHHHHH
Confidence 665543
No 83
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.7e-28 Score=212.48 Aligned_cols=341 Identities=14% Similarity=0.060 Sum_probs=245.1
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccc
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 101 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 101 (459)
+++.+-+++++|++.++..+...+.+++.|.+.||+|+|..+++|++++..+++++++.++++.+++.|.+||+|.+...
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence 46678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHhccCCC-cchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHh
Q 012626 102 QAVPLYLSEMAPTH-LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIE 180 (459)
Q Consensus 102 ~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~ 180 (459)
++..++++|.+|++ +|++++|+.-.+.++|.++||+. ++...+..|.+.+|++.+++.++-..+.+++-|..+
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpf--GGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~---- 251 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPF--GGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE---- 251 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCc--ccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc----
Confidence 99999999999865 57999999999999999999999 777778889999999999999998877766433210
Q ss_pred hCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHH-H
Q 012626 181 RGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVL-F 259 (459)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 259 (459)
.+.+...+..+++++++.+. ++.................-..+.+ .
T Consensus 252 -----------------------------~~~~~~~~~~~~~~Ll~dP~----I~~~agai~~~n~~lafLePtlslwm~ 298 (464)
T KOG3764|consen 252 -----------------------------MDPDSTEQGTPMWSLLMDPY----ILLIAGAITFSNSSLAFLEPTLSLWML 298 (464)
T ss_pred -----------------------------cCccccccCccHHHHHhCch----HhhhhcchhhccchHHHhCcccHHHHH
Confidence 00001223456777776665 3333222222222222222223333 3
Q ss_pred HhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhh--hhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHH
Q 012626 260 QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALL--ISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVV 337 (459)
Q Consensus 260 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (459)
++...+.-+.|..+....+...++..+.|.+.||++.-+.+ ..+.+..+.+.....+.. .....+...
T Consensus 299 e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~----------~~~~L~vp~ 368 (464)
T KOG3764|consen 299 ETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT----------SIAQLWVPN 368 (464)
T ss_pred HhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh----------hHHHHhhhh
Confidence 44554444889999999999999999999999999843333 333333332222222221 011123333
Q ss_pred HHHHHHHHHHhhcccccccccccccCChh---hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 012626 338 VVICLFVLAFGWSWGPLGWTVPSEIFPLE---TRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIM 412 (459)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 412 (459)
....+.+........|.. .+..|....+ ..|...++......++.+++|.+.|.+.+..|+.+.....++.-+.
T Consensus 369 ~~l~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~i 445 (464)
T KOG3764|consen 369 FGLGFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLI 445 (464)
T ss_pred HHHHHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHH
Confidence 333333333333344432 3333443333 6788999999999999999999999999999976655555544433
No 84
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=1.5e-26 Score=217.14 Aligned_cols=353 Identities=11% Similarity=0.065 Sum_probs=228.6
Q ss_pred hhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHH---HH-----HhHHH
Q 012626 14 LKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA---AA-----ANLAM 85 (459)
Q Consensus 14 ~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~~-----~~~~~ 85 (459)
.+.....+++++|+++.+.|++.+.+.++..+++++.|+++||+|||+.++.+....+++..... +. +.+..
T Consensus 22 ~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (396)
T TIGR00882 22 FPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVG 101 (396)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 33444445667899999999999999999999999999999999999999887776655443321 11 22345
Q ss_pred HHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHH
Q 012626 86 LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT 165 (459)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~ 165 (459)
+++.|++.|++.+...+....+..|..+ ++++.++......++|.++||+++ +... ..+||..|++.+++.++..
T Consensus 102 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~--g~l~-~~~~~~~f~~~~~~~~~~~ 176 (396)
T TIGR00882 102 AIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIA--GILF-SIDPQIVFWLGSGFALILM 176 (396)
T ss_pred HHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHH--hhhh-ccCchHHHHHHHHHHHHHH
Confidence 6777899999988888888888777543 345667778888899999999884 3333 3489999999988888776
Q ss_pred HHHhc-cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhh
Q 012626 166 VGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQI 244 (459)
Q Consensus 166 ~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (459)
+..++ .||+|+. ++.++. .+ .+.++.+.++.++.+|++..+.. .+..+..
T Consensus 177 ~~~~~~~~~~~~~----~~~~~~-------~~--------------~~~~~~~~~~~~~~l~~~~~~~~----~l~~~~~ 227 (396)
T TIGR00882 177 LLLMFAKPKAPSS----ATVANA-------LG--------------ANASAFSLKLALELFRQRKFWMF----VLYVVGV 227 (396)
T ss_pred HHHHHhCCCCchh----hhhhcc-------cc--------------cccCCCCHHHHHHHHcCCcHHHH----HHHHHHH
Confidence 55544 4444311 000000 00 00000111234455555542222 2222222
Q ss_pred hcchHHHHHhHHHHHHhc----CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhh
Q 012626 245 LTGINSILFYAPVLFQSM----GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGL 320 (459)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (459)
...+.....+.+.+.+++ +.+....+.......+...++.+..+++.||+++|+.+..+..+.++........
T Consensus 228 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~--- 304 (396)
T TIGR00882 228 ACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA--- 304 (396)
T ss_pred HHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc---
Confidence 223333433455555442 4455567888888888889999999999999999999888777666655443321
Q ss_pred ccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHhhccc
Q 012626 321 KFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSI-TVAVNLFFTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~~ 399 (459)
++.+......++.+.+...... ....+..+..|++.++++.+. .+....+|+.+++.+.|++.|..|+
T Consensus 305 ----------~~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~ 373 (396)
T TIGR00882 305 ----------TTALEVVILKMLHAFEVPFLLV-GCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGF 373 (396)
T ss_pred ----------CChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhccc
Confidence 2233333333333333332211 223455667788888887776 5788999999999999999999898
Q ss_pred hhHHHHHHHHHHHHH
Q 012626 400 GIFLFFAGWVTIMTI 414 (459)
Q Consensus 400 ~~~~~~~~~~~l~~~ 414 (459)
...+.+.+++.++..
T Consensus 374 ~~~f~~~~~~~~i~~ 388 (396)
T TIGR00882 374 QGAYLVLGCIVLLFT 388 (396)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777666665554433
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=7.7e-27 Score=247.34 Aligned_cols=334 Identities=13% Similarity=0.078 Sum_probs=228.5
Q ss_pred hhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHH---HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhH
Q 012626 30 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIIC---GGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPL 106 (459)
Q Consensus 30 ~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 106 (459)
...++..+++.+.++++++++|+++||+|||+++.. ..++..+..+.+...+|+++++++|+++|++.+...|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457888899999999999999999999999997633 22333333333344589999999999999999999999999
Q ss_pred HHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhhCcHHH
Q 012626 107 YLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIERGKKVE 186 (459)
Q Consensus 107 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~ 186 (459)
++.|++|+++|++++++.+++.++|.++||++ ++......+|++.|+..++..++.+++.+++|+++... ++...+
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 207 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTII--GGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAA--PDLKID 207 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHH--HHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCC--CCCeec
Confidence 99999999999999999999999999999999 55555667899999666666666566666677654100 000000
Q ss_pred HHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCC
Q 012626 187 GRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFK 265 (459)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 265 (459)
... . +.....++.+.+++.. +...+..+........+..+.|.++++ +|.+
T Consensus 208 ---------------~~~--~-------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~ 259 (1140)
T PRK06814 208 ---------------RNI--I-------RSTITLLKYAKADKRI----WLAILGISWFWLVGAVVLSQLPLLAKETLGGD 259 (1140)
T ss_pred ---------------cch--H-------HHHHHHHHHHhcCchH----HHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCc
Confidence 000 0 0001123444444442 223333333333344555677877766 8999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCc-------cccchhhhHHHH
Q 012626 266 GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ-------ELSKSFSILVVV 338 (459)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 338 (459)
+...+++.+..+++.++|.++.+++.|+..+++.+..+.++..++.+.+.+.......... .......+...+
T Consensus 260 ~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (1140)
T PRK06814 260 ENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILI 339 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHH
Confidence 9999999999999999999999999988777766655555444444333321000000000 000022333444
Q ss_pred HHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 339 VICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 396 (459)
..++++.+.+....+. .+++.+..|++.+|+++|+.+++..++..+++.+.+.+.+.
T Consensus 340 ~~~~~g~~~~~~~~~~-~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 340 DLFGLAAAGGLYIVPL-FAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred HHHHHHHHHHHhHHHH-HHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445555555444444 67888999999999999999999999999999999988753
No 86
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=2.3e-27 Score=231.89 Aligned_cols=382 Identities=12% Similarity=0.083 Sum_probs=257.6
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH--
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA-- 81 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-- 81 (459)
++.++..+.+.+...+.++++++++..+.|++.+.+.++++++.++.|+++||+|||+.+.++.++++++++++++.+
T Consensus 42 ~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~ 121 (633)
T TIGR00805 42 QLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFL 121 (633)
T ss_pred HHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHh
Confidence 445556677888889999999999999999999999999999999999999999999999999999999999998763
Q ss_pred -------------------------------------------------hHHHHHHHHHHHhhcccccchhhhHHHHhcc
Q 012626 82 -------------------------------------------------NLAMLLTGRILLGVGIGFGNQAVPLYLSEMA 112 (459)
Q Consensus 82 -------------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 112 (459)
.+..++++|+++|+|.+..++...+++.|++
T Consensus 122 ~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~ 201 (633)
T TIGR00805 122 SGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFA 201 (633)
T ss_pred cCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccC
Confidence 2457889999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc-c-------------------chhHHHHHhhhHHHHHHHHHHhccC
Q 012626 113 PTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE-T-------------------WGWRLSLGLAAAPALMMTVGGILLP 172 (459)
Q Consensus 113 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~-~-------------------~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (459)
|+++|+++++++..+..+|.++|++++....... + .+||..|++.+++.++..+.++++|
T Consensus 202 ~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 202 KSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred CccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999854332110 0 1388889998888887766666676
Q ss_pred CChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHH
Q 012626 173 ETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSIL 252 (459)
Q Consensus 173 e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (459)
++.+....+.+.+..++. .. +..+ +....+ .....++.....+.+++++. ++...+..+.....+..+.
T Consensus 282 ~~lp~~~~~~~~~~~~~~--~~-~~~~-~~~~~~---~~~~~~~~~~~~~~Ll~n~~----f~~~~l~~~~~~~~~~~~~ 350 (633)
T TIGR00805 282 KALPKEGKRVNVDVHETE--KL-EKSE-DKSRKK---NSDITKDFPKIIKRLLCNPI----YMLVILAQVIDSLAFNGYI 350 (633)
T ss_pred cccCCcccccchhhhhhh--cc-cccc-cccchh---hhhhHHHHHHHHHHHHcCcH----HHHHHHHHHHHHHHHHHHH
Confidence 543110000000000000 00 0000 000000 00000011123444555544 4555555555566667788
Q ss_pred HhHHHHHHh-cCCCCchhHHHHHHHHH-HHHHHHHHHHHHHHhhCC--chhhhhhhHHHHHHHHHHHHHHhh--------
Q 012626 253 FYAPVLFQS-MGFKGDASLYSSAMTGA-VLASSTLISIATVDKLGR--RALLISGGIQMITCQVIVSIILGL-------- 320 (459)
Q Consensus 253 ~~~~~~~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------- 320 (459)
.+.|.++++ +|+++.+++.+.....+ +.+++.+++|+++||+++ |+.+..+.....++.+........
T Consensus 351 ~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~a 430 (633)
T TIGR00805 351 TFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVA 430 (633)
T ss_pred HHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccc
Confidence 889988876 99999999988887776 568899999999999984 455555555555544332211000
Q ss_pred -----------------ccCC-----C--------------------c--------c----------------------c
Q 012626 321 -----------------KFGP-----N--------------------Q--------E----------------------L 328 (459)
Q Consensus 321 -----------------~~~~-----~--------------------~--------~----------------------~ 328 (459)
..+. . + . -
T Consensus 431 gv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C 510 (633)
T TIGR00805 431 GVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLC 510 (633)
T ss_pred eeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCC
Confidence 0000 0 0 0 0
Q ss_pred cch--h-hhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHH-HHHHHHHHHHHHHHhhc
Q 012626 329 SKS--F-SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL-FFTFVIAQIFLTLLCSF 397 (459)
Q Consensus 329 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~~~~~~~~ 397 (459)
+.+ . ....++..++..+.......|.. ..+-..+|+++|+.+.|+...+.+ +|.+-+|.++|.+.|..
T Consensus 511 ~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~-~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 511 NPPCATSLLYFLILFIPLSFIAFITAVPLY-MVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred CcccchhHHHHHHHHHHHHHHHHhccCchh-eEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence 000 0 11122222333333344445553 455588899999999999998765 66789999999999853
No 87
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=7.7e-27 Score=216.19 Aligned_cols=325 Identities=13% Similarity=0.094 Sum_probs=219.7
Q ss_pred CCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc-----cchhH-HHHHHHHHHHHHHHHHHH---HhHHHHHHH
Q 012626 19 AHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-----GRRAS-IICGGISFLLGAALNAAA---ANLAMLLTG 89 (459)
Q Consensus 19 ~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~-~~~~~~~~~~~~~~~~~~---~~~~~l~~~ 89 (459)
+.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.+++....++. .+.+.+...
T Consensus 12 ~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~ 89 (356)
T TIGR00901 12 PYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGL 89 (356)
T ss_pred HHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHH
Confidence 33456789999999999755 455555 89999999998 89886 567777777777777776 566778888
Q ss_pred HHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccch--------hHHHHHhhhHHH
Q 012626 90 RILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWG--------WRLSLGLAAAPA 161 (459)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~g--------wr~~f~~~~~~~ 161 (459)
.++.+++.+...+...+++.|++|+++|+++.++...+.++|.++++.++ .......+ ||..|++.++..
T Consensus 90 ~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~--~~l~~~~g~~~~~~~~wr~~f~i~ai~~ 167 (356)
T TIGR00901 90 AFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLA--LVLASPEFANTGLITLWGYIFFWTALLI 167 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHH--HHHhhhcccccccccccHHHHHHHHHHH
Confidence 88889988888999999999999999999999999999999999999984 44444445 999999999887
Q ss_pred HHHHHHHhc-cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHH
Q 012626 162 LMMTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMP 240 (459)
Q Consensus 162 ~~~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (459)
++..+..++ .||+++. ++.++ ++ . ++.+.+++++++++..++.......
T Consensus 168 l~~~~~~~~~~~e~~~~----~~~~~---------------~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 217 (356)
T TIGR00901 168 LPGLLVTLFLAKEPQED----ASVPK---------------PL-----T-----QAVLKPIREFFQRKNMIQALLLLLL- 217 (356)
T ss_pred HHHHHHHHHhccCCCcc----cccch---------------hH-----H-----HHHHHHHHHHHHhcCchHHHHHHHH-
Confidence 776655554 5664310 00000 00 0 0011234455544432223332222
Q ss_pred HHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHH-HHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHh
Q 012626 241 MFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTG-AVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (459)
.+.....+.....+.|.+.++.|+++.+.+......+ +..+++.++++++.||+|+|+.+..+..+.++......+...
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~ 297 (356)
T TIGR00901 218 IVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLAS 297 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2223334455666777777779999999888777666 577899999999999999999888777766665544433210
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHH
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL 380 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 380 (459)
..... +.+.+..+......++..++.+....+ ..++..|.+|+++|++.+|+.+...+
T Consensus 298 ~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 298 NGHHD--GITFPHLLMLFLTITLEAVTGGLGTVA-FVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cCccc--ccccchHHHHHHHHHHHHHHhHHHHHH-HHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 00000 000011233333333444444444443 46888999999999999999887654
No 88
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=2.3e-26 Score=218.08 Aligned_cols=347 Identities=16% Similarity=0.116 Sum_probs=252.6
Q ss_pred cccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH-----HhHHHHHHHHHHHhhcccc
Q 012626 25 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-----ANLAMLLTGRILLGVGIGF 99 (459)
Q Consensus 25 ~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~ 99 (459)
..-|+..++++..+..+...+.+++.|.++||++|||+++.+-++.++..+..++. .+.+.+++.-++.|++.+.
T Consensus 40 lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~ 119 (524)
T PF05977_consen 40 LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAF 119 (524)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHH
Confidence 35588899999999999999999999999999999999999998887766555443 4678999999999999999
Q ss_pred cchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHHH
Q 012626 100 GNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLI 179 (459)
Q Consensus 100 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~ 179 (459)
..|+..+++.|..|+++...+.++.+...++..++||.+ ++......|-.+.|.+.++..++........+..++
T Consensus 120 ~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal--gG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~--- 194 (524)
T PF05977_consen 120 FNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL--GGILVAFFGAAAAFLINALSFLISILALLRWKPPPP--- 194 (524)
T ss_pred HHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc---
Confidence 999999999999999999999999999999999999999 555555567788898888766655444444432210
Q ss_pred hhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHH
Q 012626 180 ERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLF 259 (459)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (459)
.++..+| ...+..+..++-..+++..+..+....+. ......+....|.+.
T Consensus 195 ~~~~~~e-------------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~~~----~l~~~a~~aLlPl~a 245 (524)
T PF05977_consen 195 PSSLPRE-------------------------RFFSALREGLRYVRSSPPLRSVLLRSFLF----NLFASAVWALLPLFA 245 (524)
T ss_pred ccccchh-------------------------hhhhhHHHHHHHHhcchHHHHHHHHHHHH----HHhhhHHHHhhhHHH
Confidence 0000000 00001122233333333323222222221 112233444578777
Q ss_pred Hh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHH
Q 012626 260 QS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVV 338 (459)
Q Consensus 260 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (459)
++ +|.++...|++.+..+++.++|.++.+++.+|+++++.+..+.+..+++.+.+.+. .+.+....
T Consensus 246 ~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~-------------~~~~~~~~ 312 (524)
T PF05977_consen 246 RDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS-------------PSFWLALI 312 (524)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc-------------hHHHHHHH
Confidence 65 89999999999999999999999999999999999888877777776666555543 23444455
Q ss_pred HHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhee
Q 012626 339 VICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYF 418 (459)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 418 (459)
..++.+.+........ .+...+..|++.||++++++++....+..++..+.|.+.+..+....+..++++.+++.++..
T Consensus 313 ~l~l~G~~~~~~~~~~-~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 313 ALFLAGAAWIIANSSL-NTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555444443 567789999999999999999999999999999999999999977666666665555554443
Q ss_pred e
Q 012626 419 F 419 (459)
Q Consensus 419 ~ 419 (459)
.
T Consensus 392 ~ 392 (524)
T PF05977_consen 392 R 392 (524)
T ss_pred H
Confidence 3
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=3.9e-27 Score=213.13 Aligned_cols=365 Identities=12% Similarity=0.056 Sum_probs=237.7
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchh-HHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQG-LAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN 82 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
|+.++ |...+...+.+.+|+|+|++| .|.+.++++.++++++++.|+++||+|.|+++..+.+.+++.+++.+++++
T Consensus 37 F~~e~--R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 37 FMAQF--RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS 114 (511)
T ss_pred HHHHh--hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666 777777888888999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhh---hH
Q 012626 83 LAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLA---AA 159 (459)
Q Consensus 83 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~---~~ 159 (459)
+..+.+.|++.|++.|+.. +...++..|+|+++|+++.++...+..+|.+++++++.. ....|||+.+.+. ..
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql---l~s~gWr~y~~Ln~Isl~ 190 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL---LVTLGWISYSTLNIISLV 190 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCchhHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999544 3456898766553 33
Q ss_pred HHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccH-HHHHHHHH--HHhhcccCCchHHHhcccchhHHHHH
Q 012626 160 PALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNA-EYQDMVDA--SELANSIKHPFRNILERRNRPQLVMA 236 (459)
Q Consensus 160 ~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (459)
...+.++..+++|..++.+.-+++.+.......+.....+.+. +..+..+. ...-......+++..+++ .++.
T Consensus 191 s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~----~vl~ 266 (511)
T TIGR00806 191 FMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNP----QLLL 266 (511)
T ss_pred HHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCc----chhh
Confidence 3334455667888666544433322110000000000000000 00000000 000000011122222332 2444
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHhcCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHH
Q 012626 237 IFMPMFQILTGINSILFYAPVLFQSMGFK-GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVS 315 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 315 (459)
..+.+....+++..+..|...+-++..-+ +.-.|..-.+..+.+.+..+..|++-.++.+.-.+.++.....-+.+++.
T Consensus 267 WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~ 346 (511)
T TIGR00806 267 WSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFW 346 (511)
T ss_pred hhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhh
Confidence 44555556666777777777776654322 22455666677777777888888885555333233333333333333222
Q ss_pred HHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012626 316 IILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF 390 (459)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 390 (459)
.. ..++.|...+...++...+....... ..-+++....+.-|...|+.+++..+-..+...+.
T Consensus 347 m~-----------~t~~Iw~~Y~~yvlf~~~y~flitia-~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV 409 (511)
T TIGR00806 347 MS-----------QSHDIWVLYVTYVLFRGIYQFLVPIA-TFQIASSLSKELCALVFGINTFVATALKTIITAVV 409 (511)
T ss_pred hh-----------cccchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccceEEEEecHHHHHHHHHHheEEEE
Confidence 22 12445666666666666666544333 34445555666778889988887776665555443
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=1.1e-26 Score=200.13 Aligned_cols=340 Identities=15% Similarity=0.083 Sum_probs=213.0
Q ss_pred cccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhh
Q 012626 25 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAV 104 (459)
Q Consensus 25 ~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 104 (459)
.+.+....|.+.|.+.++..+.++.+|.++||+|||+++++|++..++..++.+.+.||..+++.|++.|+..| .....
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~ 141 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVI 141 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHH
Confidence 34567778999999999999999999999999999999999999999999999999999777778999999977 45788
Q ss_pred hHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc-cch---hHHHHHhhhHHHHH-HHHHHhccCCChHHHH
Q 012626 105 PLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE-TWG---WRLSLGLAAAPALM-MTVGGILLPETPNSLI 179 (459)
Q Consensus 105 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~-~~g---wr~~f~~~~~~~~~-~~~~~~~~~e~p~~l~ 179 (459)
.++++|.+++|+|++.++.++..+++|.++||.++....... ..| .-.+-++..+.+.. .....+++|||-+.
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~-- 219 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPL-- 219 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccc--
Confidence 999999999999999999999999999999999954444311 111 11112233333333 33445778998421
Q ss_pred hhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccC-CchHHHhcccchhH---HHHHHHHHHHhhhcchHHHHHhH
Q 012626 180 ERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIK-HPFRNILERRNRPQ---LVMAIFMPMFQILTGINSILFYA 255 (459)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 255 (459)
+++.++.. +..+..+.+.+..+.. ..-....|++.... ..-.+.+..+.....+..+..+.
T Consensus 220 -rk~~~~~~--------------~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~ 284 (451)
T KOG2615|consen 220 -RKRNDEHS--------------TLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTV 284 (451)
T ss_pred -hhhccccc--------------chhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 11111100 0000000000000000 00001112221111 11122222333333333344444
Q ss_pred HHHH-HhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhC--CchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchh
Q 012626 256 PVLF-QSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLG--RRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSF 332 (459)
Q Consensus 256 ~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (459)
+.+. ..+|+++.+.|.+....++.+.+.+....+..||.+ .+-.+......+.-..+++... ..
T Consensus 285 ~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~-------------~~ 351 (451)
T KOG2615|consen 285 LFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA-------------RT 351 (451)
T ss_pred HHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc-------------cc
Confidence 4442 348999999999999888888877777666666654 3333333322222222222211 11
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 333 SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 396 (459)
.........+..+..+ ...+....++....|+++||+..|+....+.++.+++|.+.|.+...
T Consensus 352 ~~~l~~~s~l~sf~~A-~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 352 PVVLYLGSTLKSFSTA-SVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred chhhhHHHHHHHHHHH-HhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 1222222233333333 33344467888899999999999999999999999999999876543
No 91
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=3.7e-25 Score=208.72 Aligned_cols=369 Identities=18% Similarity=0.162 Sum_probs=228.9
Q ss_pred hhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 012626 7 KFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAML 86 (459)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l 86 (459)
.|+.-.......+.+..|+|-+ ....|+.+.+.++.++..++.|+++|.+|||.+++.+.++..+|+++++.++|...+
T Consensus 56 ~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~ 134 (599)
T PF06609_consen 56 AYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTF 134 (599)
T ss_pred HHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHH
Confidence 3433333344445566777765 567899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHH
Q 012626 87 LTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTV 166 (459)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~ 166 (459)
+.+..+.|+|.|... .....++|..|.|.|....++.....-.....++.++ .......+|||.|++.++...+.++
T Consensus 135 iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia--~~~~~~~~WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 135 IAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIA--QLFAAHSGWRWIFYIFIIWSGIALV 211 (599)
T ss_pred HHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHH--HHhccCCCcchHHHHHHHHHHHHHH
Confidence 999999999977665 4566689999999998877777665555555566663 2233345899999999888776655
Q ss_pred HHhc--cCCChHHHHhhC-cHHHHHHHHHHHh---------------CCCcc-cHHHHHH-------------H--HHHH
Q 012626 167 GGIL--LPETPNSLIERG-KKVEGRRVLEKIR---------------GTKEV-NAEYQDM-------------V--DASE 212 (459)
Q Consensus 167 ~~~~--~~e~p~~l~~~~-~~~~~~~~~~~~~---------------~~~~~-~~~~~~~-------------~--~~~~ 212 (459)
..++ .|++.+.+..++ .+.+..+.++.+. ..... ..+.++. . ---+
T Consensus 212 l~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE 291 (599)
T PF06609_consen 212 LIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWE 291 (599)
T ss_pred HHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhh
Confidence 4432 343322221111 1222222233221 00000 0000000 0 0001
Q ss_pred hhcccCCc--hHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHH-hcCCCCc---hhHHHHHHHHHHHHHHHHH
Q 012626 213 LANSIKHP--FRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGD---ASLYSSAMTGAVLASSTLI 286 (459)
Q Consensus 213 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~~~ 286 (459)
.....+++ -.+++|+++ .+...++..+.....++....+.|.... -++-++. ..++.....+++..+|.++
T Consensus 292 ~~~~~~~Pl~P~~Lf~~~r---~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i 368 (599)
T PF06609_consen 292 WFGAPKDPLFPHRLFKDRR---GFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVI 368 (599)
T ss_pred hhccCCCCcCCHHHhccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHH
Confidence 01111222 234554422 2333333333333334444444454433 3555543 5677888888999999999
Q ss_pred HHHHHHhhCCchh-hhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCCh
Q 012626 287 SIATVDKLGRRAL-LISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL 365 (459)
Q Consensus 287 ~g~l~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 365 (459)
.+.+..|++|-|. ++.+...+.+++.++.... .++....+....+.+.+.+....+. ...++-..|+
T Consensus 369 ~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~-----------~~n~~~~i~~~~l~g~giG~~~~~~-~~~~ql~~p~ 436 (599)
T PF06609_consen 369 LGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR-----------PDNKNAAIAFLVLAGFGIGGILVPA-IVIAQLIVPD 436 (599)
T ss_pred HHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc-----------CCCcchHHHHHHHHHHhHHHHHHHH-HHeeEeeeCc
Confidence 9999998877544 4455555444433333321 1111222333444455555444443 3555567799
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 366 ETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 366 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
+.-+++.|+...++.+|+.++..++..+.
T Consensus 437 ~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 437 EDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999999999999998886544
No 92
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.5e-25 Score=195.88 Aligned_cols=340 Identities=13% Similarity=0.149 Sum_probs=259.6
Q ss_pred hhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHH---HHHhHHHHHH
Q 012626 12 VYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNA---AAANLAMLLT 88 (459)
Q Consensus 12 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~l~~ 88 (459)
.......|+.++.++++..|.+.+...++.++.+.+++.|.+.+|+|+|+.++.|+.++++++.+.. ...+|..+++
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~ 109 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLV 109 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 3445667788899999999999999999999999999999999999999999999999999999984 5678999999
Q ss_pred HHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc-----------------ccchhH
Q 012626 89 GRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKL-----------------ETWGWR 151 (459)
Q Consensus 89 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~-----------------~~~gwr 151 (459)
+-++.|.|.+...+.++.+++...++++..+.+++.+...++|.+++|+++...... +...||
T Consensus 110 ~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~ 189 (422)
T COG0738 110 ALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQ 189 (422)
T ss_pred HHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999899999999999999999999996444331 012488
Q ss_pred HHHHhhhHHHHHHHHHHhc--cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccc
Q 012626 152 LSLGLAAAPALMMTVGGIL--LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRN 229 (459)
Q Consensus 152 ~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (459)
++|...+...++..+.... .|+.+. .+.+..+.++....++++++.
T Consensus 190 ~pYl~~~~~lvll~v~~~~~k~p~~~~--------------------------------~~~~~~~~~~~~~~~l~~~~~ 237 (422)
T COG0738 190 FPYLILAGLLVLLAVLILLSKLPDLQV--------------------------------AAPSLGASGSAGLSSLFQNKH 237 (422)
T ss_pred hHHHHHHHHHHHHHHHHHhccCCcCCc--------------------------------ccccccccccchHHHHHhChH
Confidence 8888877777666655544 344330 000000111113556666666
Q ss_pred hhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHH
Q 012626 230 RPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMI 308 (459)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 308 (459)
+....+..++..........+.+.++.+ .|.+..++....+....+.++|++++.++..|+...|.+........
T Consensus 238 ----~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~i 313 (422)
T COG0738 238 ----LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAI 313 (422)
T ss_pred ----HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3444555555666667778888888887 89999999999999999999999999999999999998877766555
Q ss_pred HHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHH
Q 012626 309 TCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQ 388 (459)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 388 (459)
+.++...+.. ....+....+.+.+.+..++.+ ++...+..| +. ....|.......+|+++.|+
T Consensus 314 ll~~~~~l~~--------------g~v~~~~l~~ig~F~simfPTI-fslal~~l~-~~-ts~~s~~l~maivGGAiiP~ 376 (422)
T COG0738 314 LLLLAVALIG--------------GVVALYALFLIGLFNSIMFPTI-FSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPP 376 (422)
T ss_pred HHHHHHHHhc--------------ChHHHHHHHHHHHHhHHHHHHH-HHHHHhccC-cc-ccccceeeeeheecchHHHH
Confidence 5555444431 2344555566666666666554 677778888 33 33444555667789999999
Q ss_pred HHHHHHhhccchhHHH
Q 012626 389 IFLTLLCSFKFGIFLF 404 (459)
Q Consensus 389 ~~~~~~~~~~~~~~~~ 404 (459)
+.|++.|+.+......
T Consensus 377 l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 377 LQGVIADMFGIQLTFL 392 (422)
T ss_pred HHHHHHHhhhhHHHHH
Confidence 9999999988654444
No 93
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=9.2e-25 Score=208.08 Aligned_cols=375 Identities=11% Similarity=0.061 Sum_probs=233.9
Q ss_pred cccCchhHHHHHHhHHHHHHHhhhhhhhhhhh-ccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchh
Q 012626 25 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 25 ~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 103 (459)
+|++..+.+++.+.+.++..++++++|+++|| +|||+++..+.++.+++.++.+++++++.++++|++.|++.|...+.
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 122 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKAN 122 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCC
Confidence 89999999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhccCCCc---chHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccC----CChH
Q 012626 104 VPLYLSEMAPTHL---RGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLP----ETPN 176 (459)
Q Consensus 104 ~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~----e~p~ 176 (459)
..++++|++|+++ |+++++++..+.++|.++||++ .....+..|||+.|++.++..++..+...+.+ +.|+
T Consensus 123 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l--~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~ 200 (475)
T TIGR00924 123 PSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLL--AGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGS 200 (475)
T ss_pred HHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHH--HHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCC
Confidence 9999999998764 8889999999999999999999 55555667899999998765555444433332 2221
Q ss_pred HHHhhCcHHHHHHHHH---------------HHhCCCcccHHHHH------HHHHHHhhcccCCchHHHhcccchhHHHH
Q 012626 177 SLIERGKKVEGRRVLE---------------KIRGTKEVNAEYQD------MVDASELANSIKHPFRNILERRNRPQLVM 235 (459)
Q Consensus 177 ~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (459)
.. ++.+.++.+.... .....+........ .........++ ...+..+++ .. ..+
T Consensus 201 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~-~~l 275 (475)
T TIGR00924 201 VP-DPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKP--RLDAVARNK-MY-AYI 275 (475)
T ss_pred CC-CCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhc--cCCHHHHhH-HH-HHH
Confidence 00 0000010000000 00000000000000 00000000000 011111111 11 122
Q ss_pred HHHHHHHhhhcchHHHHHhHHHHHHh-cCCCC----chhHHHHHHHHHHHHHHHHHHHHHHHhhCC-----chhh--hhh
Q 012626 236 AIFMPMFQILTGINSILFYAPVLFQS-MGFKG----DASLYSSAMTGAVLASSTLISIATVDKLGR-----RALL--ISG 303 (459)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-----~~~~--~~~ 303 (459)
.+++........+.......+.+.++ .+.+. ...+++.+...+..++..++..++..|.+| +... .++
T Consensus 276 ~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G 355 (475)
T TIGR00924 276 VLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLG 355 (475)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHH
Confidence 23333333333444444444544433 33321 125677888888888777765544444433 2323 556
Q ss_pred hHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHH
Q 012626 304 GIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT 383 (459)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 383 (459)
.++.++++..+.+..... +. ....+.++.+....+...+- ....|....+..+..|++.||+.+|+......+|.
T Consensus 356 ~~l~~~~~~~~~~~~~~~--~~--~~~~s~~~~i~~~~~~~~ge-~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~ 430 (475)
T TIGR00924 356 MLFCGASFLTFAASIWFA--DA--GGLTSPWFMVLIYLFQTLGE-LMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGS 430 (475)
T ss_pred HHHHHHHHHHHHHHHhhc--CC--CCccCHHHHHHHHHHHHHHH-HHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 666666666555432111 10 01123444444444444444 45556667889999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHH
Q 012626 384 FVIAQIFLTLLCSFKFGIFLFFAGWVTI 411 (459)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l 411 (459)
.+++.+.....+..++...+...++..+
T Consensus 431 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (475)
T TIGR00924 431 LLGGYLATFGAVPQGVTGVFGKIGLVTL 458 (475)
T ss_pred HHHHHHHHHHhcccchhhHHHHHHHHHH
Confidence 9999988877666555544444444333
No 94
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.2e-24 Score=187.25 Aligned_cols=341 Identities=14% Similarity=0.102 Sum_probs=259.5
Q ss_pred hcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 012626 16 KKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGV 95 (459)
Q Consensus 16 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (459)
...+++++|+|+|.+..|.+++...+...+.+++..+++.|+|.++.+..++++..++.++-... +.+.++.+-.+.|.
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~ 111 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGA 111 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHh
Confidence 35566788999999999999999999999999999999999999999999999999999998777 77889999999999
Q ss_pred cccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHhhhHHHHHHHHHHhccCCC
Q 012626 96 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILLPET 174 (459)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~-~gwr~~f~~~~~~~~~~~~~~~~~~e~ 174 (459)
|.+......++++.+.+|+ +-+..++++....++|..+++.++ ....++ .|||....+.+.++++.++.++.-...
T Consensus 112 gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~la--vpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r 188 (395)
T COG2807 112 GIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALA--VPLAQHSGGWRGALGFWALLALLALLIWLPQALR 188 (395)
T ss_pred hHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhh--hHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 9999999999999999975 579999999999999999998883 444443 479999999999999888877532111
Q ss_pred hHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHh
Q 012626 175 PNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY 254 (459)
Q Consensus 175 p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (459)
++ ....+.+..+..+++|++. .|.+.+.+..+...++....|
T Consensus 189 ~~----------------------------------~~~~~~~~~~~~~vw~~~~----aW~vtLfmGlqS~~~Y~~~~W 230 (395)
T COG2807 189 EQ----------------------------------AASIATKLVSVRKVWRSPL----AWQVTLFMGLQSLLYYIVIGW 230 (395)
T ss_pred cc----------------------------------ccccccccccccccccCch----hHHHHHHHHhhHHHHHHHHHH
Confidence 10 0001112233345666665 445555566666678889999
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-CCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhh
Q 012626 255 APVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 333 (459)
Q Consensus 255 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (459)
.|.++.+.|+|..++|.+.+...+..++..+....+.+|. ++|+.......++.++.+.+.+. +....
T Consensus 231 LP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~-----------P~~~~ 299 (395)
T COG2807 231 LPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA-----------PGQLP 299 (395)
T ss_pred HHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh-----------hhhHH
Confidence 9999999999999999999999999999999999999975 55666666666666666655543 12222
Q ss_pred hHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHH
Q 012626 334 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLFFAGWVTIM 412 (459)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 412 (459)
+++ ..+.+.+.+..+.-....+....-.++..+.-.|+.+.++++-++.+|.++|++.|..+ |...+...+.+.+.
T Consensus 300 ~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~ 376 (395)
T COG2807 300 ILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLL 376 (395)
T ss_pred HHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHH
Confidence 322 34444444433332222222334456778888999999999999999999999999887 55444444444333
No 95
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=8.6e-25 Score=208.22 Aligned_cols=363 Identities=10% Similarity=0.033 Sum_probs=221.7
Q ss_pred CCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhh-ccchhHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHhhcc
Q 012626 20 HENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNAAAANLAM-LLTGRILLGVGI 97 (459)
Q Consensus 20 ~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~ 97 (459)
.+++++|++.++.+++.+.+.....+..+++|+++|| +||||+++.+.+++++++++++++++... ++++|+++|+|.
T Consensus 40 yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~ 119 (489)
T PRK10207 40 FFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGN 119 (489)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcc
Confidence 3456789999999999999998888889999999999 99999999999999999999999876544 558999999999
Q ss_pred cccchhhhHHHHhccCCC--cchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCCh
Q 012626 98 GFGNQAVPLYLSEMAPTH--LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETP 175 (459)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p 175 (459)
|...+...+++.|.+|++ +|++++++++.+.++|..+||.+ +....+..|||+.|++.++..++..+...+.++..
T Consensus 120 g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l--~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~ 197 (489)
T PRK10207 120 GLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL--APVIADKFGYSVTYNLCGAGLIIALLVYFACRGMV 197 (489)
T ss_pred ccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH--HHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 999999999999999877 45789999999999999999999 56666677999999996554333333333333221
Q ss_pred HHHH--hhCcHHHHHHHH-------------HHHhCCCcccHHHHHH---HHHH-HhhcccCCchHHHhcccchhHHHHH
Q 012626 176 NSLI--ERGKKVEGRRVL-------------EKIRGTKEVNAEYQDM---VDAS-ELANSIKHPFRNILERRNRPQLVMA 236 (459)
Q Consensus 176 ~~l~--~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (459)
+... .+++..+..... ....+........... .... -..++.+. .+.+|++.... ..
T Consensus 198 ~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~--~~~~r~r~~~~--~~ 273 (489)
T PRK10207 198 KDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKL--DKTGRNKMFVA--FV 273 (489)
T ss_pred cccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHH--HH
Confidence 1000 001001111100 0000000000000000 0000 00000011 12222222111 11
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHh-c-----CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchh-------hhhh
Q 012626 237 IFMPMFQILTGINSILFYAPVLFQS-M-----GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRAL-------LISG 303 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-----g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-------~~~~ 303 (459)
+++........+....+..+.+.++ . |+.. ....+.....+..++..++.+++.||+++|+. +.++
T Consensus 274 l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i-~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G 352 (489)
T PRK10207 274 LMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSI-NPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLG 352 (489)
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHhccccccceEE-CHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHH
Confidence 1111222222233333444444442 2 2211 23445555666677778888999999998863 6666
Q ss_pred hHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHH
Q 012626 304 GIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT 383 (459)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 383 (459)
..+.+++.+.+....... ... ....+.++.+....+.+.+.. ...+....++.+..|++.++.++|+.+....+|+
T Consensus 353 ~~l~~~~~~~~~~~~~~~-~~~--~~~~s~~~~i~~~~l~g~Ge~-~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~ 428 (489)
T PRK10207 353 MFLCSLGFLTAAAAGMWF-ADA--QGLTSPWFIVLVYLFQSLGEL-FISALGLAMIAALVPQHLMGFILGMWFLTQAAAF 428 (489)
T ss_pred HHHHHHHHHHHHHHHHhh-cCC--CCccCHHHHHHHHHHHHHHHH-HHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 666666655443211111 110 011223444444445555544 4445556778889999999999999999999999
Q ss_pred HHHHHHHHHH
Q 012626 384 FVIAQIFLTL 393 (459)
Q Consensus 384 ~~~~~~~~~~ 393 (459)
.++..+....
T Consensus 429 ~lg~~l~~~~ 438 (489)
T PRK10207 429 LLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHh
Confidence 9998887654
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=5.3e-24 Score=199.53 Aligned_cols=350 Identities=11% Similarity=-0.044 Sum_probs=224.7
Q ss_pred CCCccccCchhHHHH--HHhHHHHHHHhhhhh-hhhhhhccchhHHHHHHHHH-HHHHHHHH---HHHh-HHHHHHHHHH
Q 012626 21 ENNYCKYDNQGLAAF--TSSLYLAGLVASFVA-SPVTRDYGRRASIICGGISF-LLGAALNA---AAAN-LAMLLTGRIL 92 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~--~s~~~l~~~i~~~~~-g~l~dr~Grr~~~~~~~~~~-~~~~~~~~---~~~~-~~~l~~~r~l 92 (459)
.-+|.|.|.+++|.+ .+.+.+...+.++++ ++.+||+||||..++.+.+. .......+ ...+ ..+++..-++
T Consensus 27 ~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (390)
T TIGR02718 27 LLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLAC 106 (390)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHH
Confidence 445669999999997 467788888888888 55799999998875555332 21222222 1222 3344555566
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccC
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLP 172 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (459)
.++..+...+...++..|..++++++...+....+..+|.++|+.. .....+..|||..|++.++..++..+..++++
T Consensus 107 ~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~--~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 107 ASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAG--TLVLFGKFGQRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6677777888888889999988888988889988889999999877 55556667999999999988877666655554
Q ss_pred CChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHH
Q 012626 173 ETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSIL 252 (459)
Q Consensus 173 e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (459)
|+++. +++.+ +....+.++.+|++..+......++ .........
T Consensus 185 ~~~~~---~~~~~-----------------------------~~~~~~~~~~l~~~~~~~~~~~~~l----~~~~~~~~~ 228 (390)
T TIGR02718 185 DRAVA---SPEAP-----------------------------LARRASLFRFFRRPLAWSLLALALL----SAMTAVSGF 228 (390)
T ss_pred CCCcC---ccccc-----------------------------hhhHHHHHHHHcCcCHHHHHHHHHH----HHHHHHHHH
Confidence 43210 00000 0001224455655543333322222 222233444
Q ss_pred HhHHHHHHhcCCCCchhHHHHHHHHH-HHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccch
Q 012626 253 FYAPVLFQSMGFKGDASLYSSAMTGA-VLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKS 331 (459)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (459)
.+.+.++++.|+++++.+......+. ..+++.++.|++.||+++|+.+..+.....+..+......... ...
T Consensus 229 ~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~ 301 (390)
T TIGR02718 229 GLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFW-------LAP 301 (390)
T ss_pred HHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcc-------cCC
Confidence 45666777789999999998887764 5667789999999999999988776655433322222111000 001
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccccccccCCh-hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 012626 332 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL-ETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 410 (459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (459)
..........+.....+...... .....+..++ +.+++.+++.+...++|..++|.+.|.+.|..++...+...+++.
T Consensus 302 ~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~ 380 (390)
T TIGR02718 302 GIAVAWSCSAFGSLITGITSVAI-YTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLA 380 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 11111222222222333333333 3444455554 889999999999999999999999999999999877777766666
Q ss_pred HHHHhh
Q 012626 411 IMTIFV 416 (459)
Q Consensus 411 l~~~~~ 416 (459)
+.+.+.
T Consensus 381 l~a~~~ 386 (390)
T TIGR02718 381 VLAILL 386 (390)
T ss_pred HHHHHH
Confidence 555443
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.93 E-value=9.1e-24 Score=200.85 Aligned_cols=357 Identities=13% Similarity=0.099 Sum_probs=227.6
Q ss_pred hcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH------HhHHHHHHH
Q 012626 16 KKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA------ANLAMLLTG 89 (459)
Q Consensus 16 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~ 89 (459)
...+++++++|+|..+++++.+.. .....++++.|+++||+|||+++.++.+++.++.++++++ ++++.+++.
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~ 126 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVY 126 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHH
Confidence 334456789999999999998874 4456778889999999999999999999999999999998 689999999
Q ss_pred HHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-
Q 012626 90 RILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG- 168 (459)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~- 168 (459)
|++.|+|.+...+.+...+.+|+| ++||++.++...+.++|.++.+.+..... . .+|+..|++.+++.++..++.
T Consensus 127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~--~-~~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF--S-DNTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH--H-HhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999996 77999999999999999986555422222 1 368888888888877665544
Q ss_pred hcc--CCChHHHHhhCcHHHHHHHHHHHhCC-------------------------------------------------
Q 012626 169 ILL--PETPNSLIERGKKVEGRRVLEKIRGT------------------------------------------------- 197 (459)
Q Consensus 169 ~~~--~e~p~~l~~~~~~~~~~~~~~~~~~~------------------------------------------------- 197 (459)
+++ |+.+++..++++.++.++..++.++.
T Consensus 203 ~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v 282 (591)
T PTZ00207 203 VFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVT 282 (591)
T ss_pred hheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 333 55555543332222222211110000
Q ss_pred ---------------------Ccc---cHHHHHHHH------HHHh-------h---cccCCchHHHhcccchhHHHHHH
Q 012626 198 ---------------------KEV---NAEYQDMVD------ASEL-------A---NSIKHPFRNILERRNRPQLVMAI 237 (459)
Q Consensus 198 ---------------------~~~---~~~~~~~~~------~~~~-------~---~~~~~~~~~~~~~~~~~~~~~~~ 237 (459)
++. +.+..+..+ +.+. + .....++.+.+++. -+|++
T Consensus 283 ~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~----d~Wll 358 (591)
T PTZ00207 283 VIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTA----RLWCL 358 (591)
T ss_pred HHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhch----hHHHH
Confidence 000 000000000 0000 0 00001222333222 35666
Q ss_pred HHHHHhhhcchHHHHHhHHHHHHhc-CCCCch--hHHHHHHHHHHHHHHHHHHHHHHHhhCCch--------hhhhhhHH
Q 012626 238 FMPMFQILTGINSILFYAPVLFQSM-GFKGDA--SLYSSAMTGAVLASSTLISIATVDKLGRRA--------LLISGGIQ 306 (459)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~--------~~~~~~~~ 306 (459)
+...++...........+-++.+.+ |.+.+. ...+.++.++++.+|++..|.+.....+|+ ........
T Consensus 359 ~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~ 438 (591)
T PTZ00207 359 LWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV 438 (591)
T ss_pred HHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH
Confidence 6666766666667777777887777 763333 223788899999999999998873333322 11111111
Q ss_pred HHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHH
Q 012626 307 MITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVI 386 (459)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 386 (459)
+.++.+++.... + .....+..++.+.+.+..+... ...++|+|. ++-|+-+-+.....-+|..+.
T Consensus 439 ~~~~~lll~~~~------------p-~~~L~~~~~lvg~~~G~~~~~~-~~i~selFg-k~~g~~yN~~~~a~pigs~~~ 503 (591)
T PTZ00207 439 CIITMLTLFLTL------------P-KAALPLPYFIAAFANGFMAATI-ALVTRTIFA-KDPAKHYNFCFLGSVLSAIFL 503 (591)
T ss_pred HHHHHHHHHHHC------------C-ccHhHHHHHHHHHHhhHhHHHH-HHHHHHHhc-cchHHHhhHHhHHHHHHHHHH
Confidence 222222222221 1 1234555566666666665544 477799999 887877777777777777666
Q ss_pred -HHHHHHHHhh
Q 012626 387 -AQIFLTLLCS 396 (459)
Q Consensus 387 -~~~~~~~~~~ 396 (459)
-.++|.++|+
T Consensus 504 n~~l~G~~Yd~ 514 (591)
T PTZ00207 504 NRLLYGEWYTQ 514 (591)
T ss_pred HHHHHHHHHHH
Confidence 4567878774
No 98
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.92 E-value=5.7e-23 Score=196.72 Aligned_cols=337 Identities=13% Similarity=0.077 Sum_probs=212.9
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhh----hccc-hhHHHHHHHHHHHHHHHHHHHH------hHHHHHHHH
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTR----DYGR-RASIICGGISFLLGAALNAAAA------NLAMLLTGR 90 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~d----r~Gr-r~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~r 90 (459)
++.+|+++.++|.+..+..+..++..|+.|.++| |+|| |+.++++....+++..++...+ .+..+++..
T Consensus 34 t~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~ 113 (473)
T PRK10429 34 TDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTY 113 (473)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHH
Confidence 4557999999999999999999999999999999 6698 6677778888888766664432 234566667
Q ss_pred HHHhhcccccchhhhHHHHhcc-CCCcchHHHHHHHHHHHHHHHHHHHHhhh-----hhccccchhHHHHHhhhHHHHHH
Q 012626 91 ILLGVGIGFGNQAVPLYLSEMA-PTHLRGGLNMMFQLATTLGIFTANMINYG-----TQKLETWGWRLSLGLAAAPALMM 164 (459)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~-----~~~~~~~gwr~~f~~~~~~~~~~ 164 (459)
++.+++.....++..++..|+. +++||.+..++...+.++|..+.+.+... +...+..+|+....+.+++.++.
T Consensus 114 ~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~ 193 (473)
T PRK10429 114 ILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVS 193 (473)
T ss_pred HHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 7778888888888999999999 58999999998777777775555443211 11112246888877777776665
Q ss_pred HHHHh-ccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhccc-chhHHHHHHHHHHH
Q 012626 165 TVGGI-LLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERR-NRPQLVMAIFMPMF 242 (459)
Q Consensus 165 ~~~~~-~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 242 (459)
.+..+ ..+|.++. .+. +.+++++.++++.++.. +.++... .+...+
T Consensus 194 ~~~~~~~~~e~~~~----~~~---------------------------~~~~~~~~~~~~~~~~~~~n~~~~~-ll~~~~ 241 (473)
T PRK10429 194 TIITLRNVHEVYSS----DNQ---------------------------VSAEGSHLTLKDIVALIYKNDQLSC-LLGMAL 241 (473)
T ss_pred HHHHHcCceecCCc----ccc---------------------------ccccccCCCHHHHHHHHhcCHHHHH-HHHHHH
Confidence 54443 36665310 000 00001122333333211 1122222 222222
Q ss_pred hhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhcc
Q 012626 243 QILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 322 (459)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (459)
...........+.+++.+....+....+.......+..+++.++.+++.||+|+|+.+..+..+..++.+.+......
T Consensus 242 ~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~-- 319 (473)
T PRK10429 242 AYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLA-- 319 (473)
T ss_pred HHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 222333444444555554433344555666666778889999999999999999999887776555554443322100
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCC-------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 323 GPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
.....+..++...+.+.+.+... +..+++++|..+ .+..|...|....+..++..+++.+.|.+.+
T Consensus 320 ------~~~~~~~~~i~~~l~g~~~~~~~-~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 320 ------APHNALLIVIAGILLNIGTALFW-VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11223333333344444444333 344677788855 3445668899999999999999999999988
Q ss_pred hccc
Q 012626 396 SFKF 399 (459)
Q Consensus 396 ~~~~ 399 (459)
..||
T Consensus 393 ~~Gy 396 (473)
T PRK10429 393 LIGY 396 (473)
T ss_pred HcCC
Confidence 6654
No 99
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.92 E-value=2.9e-22 Score=184.86 Aligned_cols=327 Identities=15% Similarity=0.087 Sum_probs=230.8
Q ss_pred cccCchhHHHHHHhHHHHHHHhhhhhhhhhhhcc-chhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchh
Q 012626 25 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYG-RRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 25 ~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~G-rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 103 (459)
.|.|..|+|.+.+...+...++++++|.++||.+ +||++.+..++.++........++++.+++..++..+...+..|.
T Consensus 32 ~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl 111 (400)
T PF03825_consen 32 RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPL 111 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHH
Confidence 5799999999999999999999999999999986 578888888888887777778889999999999999988888999
Q ss_pred hhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhh--hhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhh
Q 012626 104 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINY--GTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIER 181 (459)
Q Consensus 104 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~--~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~ 181 (459)
..++..+... ++++-.|-.....++|.+++..... .....+..+..+.+++.+..+++.....+.+|+.|+.
T Consensus 112 ~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~---- 185 (400)
T PF03825_consen 112 SDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPK---- 185 (400)
T ss_pred HHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCccc----
Confidence 9999998885 3344455666666677666643310 1111111223345666666666555556667877610
Q ss_pred CcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh
Q 012626 182 GKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS 261 (459)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (459)
++.++ +.++....+..+++|++.. ..+.+..+...........+.+.++++
T Consensus 186 ~~~~~-------------------------~~~~~~~~~~~~llk~~~~----~~Fll~~~l~~~~~~~~~~f~~~yl~~ 236 (400)
T PF03825_consen 186 RSAKE-------------------------SVKKLLGLDALKLLKNPRF----LVFLLAAFLIGISHAAYYTFFSIYLQE 236 (400)
T ss_pred cccCC-------------------------CcccccchHHHHHhcCccH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0000001122356666552 233333344444556677778888888
Q ss_pred cC-CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHH-
Q 012626 262 MG-FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVV- 339 (459)
Q Consensus 262 ~g-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 339 (459)
.| .+....+...+...+++++.-...+++..|+|.|+++.++....++=..++.... ++.+.....
T Consensus 237 ~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~------------~~~~~~~~~~ 304 (400)
T PF03825_consen 237 LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS------------DPWPFIVALQ 304 (400)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc------------CCcHHHHHHH
Confidence 77 7777888888888999999999999999999999999999888887777766541 112222221
Q ss_pred ---HHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHH-HHHHHHHHHHHHHHHHhhccc
Q 012626 340 ---ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAV-NLFFTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 340 ---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~ 399 (459)
..+.+..++..+... ..++.+..|++.|++++++.+.. ..+|..++..+.|++.|+.+.
T Consensus 305 ~l~q~lhG~tf~~~~~a~-~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~ 367 (400)
T PF03825_consen 305 LLGQLLHGLTFGLFHAAS-VRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGA 367 (400)
T ss_pred HHHHhhhhHHHHHHHHHH-HHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence 234566666555444 58889999999999999998876 569999999999999998874
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.90 E-value=1.7e-22 Score=193.71 Aligned_cols=359 Identities=11% Similarity=0.054 Sum_probs=207.9
Q ss_pred CCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhh-ccchhHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhc
Q 012626 19 AHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNAAAA-NLAMLLTGRILLGVG 96 (459)
Q Consensus 19 ~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~ 96 (459)
..+++++|+++++.+++.+.+........+++|+++|| +|||+++..+.++.+++..++++++ +.+.+.++|+++|++
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 34456789999999999888876666667899999999 5999999999999999999998874 566778899999999
Q ss_pred ccccchhhhHHHHhccCCCc--chHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH----hc
Q 012626 97 IGFGNQAVPLYLSEMAPTHL--RGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG----IL 170 (459)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~----~~ 170 (459)
.|...+...+++.|++|+++ |..++++++.+.++|..+||.+ .....+..|||+.|++.++..++..+.. ..
T Consensus 126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i--~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~ 203 (500)
T PRK09584 126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA--TPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRW 203 (500)
T ss_pred hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH--HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999998654 4568899999999999999999 5556667799999999876544443322 22
Q ss_pred cCCChHHHHhhCcHHHHHHH------------HHHHhCCCcccHHHHHHHHHHHhhcccCCchHHH--hcccchhHHHHH
Q 012626 171 LPETPNSLIERGKKVEGRRV------------LEKIRGTKEVNAEYQDMVDASELANSIKHPFRNI--LERRNRPQLVMA 236 (459)
Q Consensus 171 ~~e~p~~l~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 236 (459)
++|.++.. .+++.+..... ........+................ ..++. .+...+++....
T Consensus 204 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 278 (500)
T PRK09584 204 VKQYGSKP-DFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVI----FGKEAFAMKGAARRKMIVA 278 (500)
T ss_pred hccCCCCC-CccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH----HHHHHhhcCHHHHHHHHHH
Confidence 33321000 00001100000 0000000000000000000000000 00000 000111222222
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHh---cCCC------CchhHHHHHHHHHHHHHHHHHHHHHHHhhC----Cchhhhhh
Q 012626 237 IFMPMFQILTGINSILFYAPVLFQS---MGFK------GDASLYSSAMTGAVLASSTLISIATVDKLG----RRALLISG 303 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~----~~~~~~~~ 303 (459)
+.+. . ....+.......+..+.. .+.+ ....++......+..++..++..++-+|.+ ..+.+.++
T Consensus 279 ~~~~-~-~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G 356 (500)
T PRK09584 279 FILM-L-EAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIG 356 (500)
T ss_pred HHHH-H-HHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHH
Confidence 1111 1 111122222223333221 1111 122556666777666666666655445544 44667777
Q ss_pred hHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHH
Q 012626 304 GIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT 383 (459)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 383 (459)
..+.+++++.+....... ... ..-+.++.+. ..+..........|....++.+..|++.||+++|+......+|.
T Consensus 357 ~~l~~l~f~~l~~~~~~~-~~~---~~vs~~~~~~-~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~ 431 (500)
T PRK09584 357 MVLCSGAFLVLPLGAKFA-NDA---GIVSVNWLIA-SYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAA 431 (500)
T ss_pred HHHHHHHHHHHHHHHHhc-CCC---CccCHHHHHH-HHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 777777777665542110 000 1112333333 33333444445566667888999999999999998777666666
Q ss_pred HHHHHHHH
Q 012626 384 FVIAQIFL 391 (459)
Q Consensus 384 ~~~~~~~~ 391 (459)
.++..+.+
T Consensus 432 ~~~g~~~~ 439 (500)
T PRK09584 432 LIAGYVAN 439 (500)
T ss_pred HHHHHHHH
Confidence 66665554
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.90 E-value=7.7e-22 Score=187.87 Aligned_cols=331 Identities=11% Similarity=0.030 Sum_probs=210.8
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhh----ccc-hhHHHHHHHHHHHHHHHHHHHHh------HHHHHHH
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGR-RASIICGGISFLLGAALNAAAAN------LAMLLTG 89 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr----~Gr-r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~ 89 (459)
..+++|++..++|.+.++..+..++..|+.|.++|| +|| |+.++.+....+++..+....++ +..+++.
T Consensus 36 ~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~ 115 (444)
T PRK09669 36 YTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVT 115 (444)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHH
Confidence 455689999999999999999999999999999998 787 45666787777777766555443 4566666
Q ss_pred HHHHhhcccccchhhhHHHHhcc-CCCcchHHHHHHHHHHHHHHHHHHHHhhh--hhc---cccchhHHHHHhhhHHHHH
Q 012626 90 RILLGVGIGFGNQAVPLYLSEMA-PTHLRGGLNMMFQLATTLGIFTANMINYG--TQK---LETWGWRLSLGLAAAPALM 163 (459)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~--~~~---~~~~gwr~~f~~~~~~~~~ 163 (459)
.++.+.+......+..++.+|+. ++++|++..++...+..+|..+++.+... ... ....+|+..+.+.++++++
T Consensus 116 ~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v 195 (444)
T PRK09669 116 YILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVV 195 (444)
T ss_pred HHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence 77777777777777889999998 56889999888888888887777654211 111 1235899988888887776
Q ss_pred HHHHHhc-cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHH
Q 012626 164 MTVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMF 242 (459)
Q Consensus 164 ~~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (459)
..+..++ .+|.++. ++ +++.+.++..+..+|++..+......++...
T Consensus 196 ~~~~~~~~~~e~~~~----~~----------------------------~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~ 243 (444)
T PRK09669 196 LFFCCFFMTKERYTP----EV----------------------------DNSSSVWKDLKLLLGNSQWRIMFIFNVVLLT 243 (444)
T ss_pred HHHHHhCCeEEecCC----CC----------------------------cCCCCHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 6554433 4553210 00 0000112234455555554433332222211
Q ss_pred hhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhcc
Q 012626 243 QILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 322 (459)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (459)
.........+++.+..-.+++..+.......+..+++.++.+++.||+|+|+....+.....+....+...
T Consensus 244 ----~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~----- 314 (444)
T PRK09669 244 ----AVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFI----- 314 (444)
T ss_pred ----HHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-----
Confidence 12222223333333321123333445555567778888899999999999998887765544433322221
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCC-------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 323 GPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
+.++.+...+..++.+.+.+. ..+..+++++|..+ .+..|...|..+.+..+|..+++.+.|.+.+
T Consensus 315 ------~~~~~~~~~~~~~i~g~~~~~-~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 315 ------PPSNVWLIFALNILFNFIQNL-TTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred ------CcchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112233334444445555553 33555788888775 3345667889999999999999999999998
Q ss_pred hccc
Q 012626 396 SFKF 399 (459)
Q Consensus 396 ~~~~ 399 (459)
..|+
T Consensus 388 ~~Gy 391 (444)
T PRK09669 388 WVDY 391 (444)
T ss_pred HcCC
Confidence 7765
No 102
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.90 E-value=1.2e-20 Score=177.38 Aligned_cols=364 Identities=16% Similarity=0.107 Sum_probs=245.5
Q ss_pred hhHHHHHHhHHHHHHHhhhhhhhhhhhccchh-HHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHhhcccccchhhhH
Q 012626 30 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRA-SIICGGISFLLGAALNAAA--ANLAMLLTGRILLGVGIGFGNQAVPL 106 (459)
Q Consensus 30 ~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~-~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~ 106 (459)
+..++..++..+..++..|+.|.++|+-|+|| .+.....+..+++.+..+. .+++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44578888999999999999999999998665 4555666666677776664 34555555666666777788888999
Q ss_pred HHHhccCCCcc--------------------------hHHHHHHHHHHHHHHHHHHHHhhhhhccc------cchhHHHH
Q 012626 107 YLSEMAPTHLR--------------------------GGLNMMFQLATTLGIFTANMINYGTQKLE------TWGWRLSL 154 (459)
Q Consensus 107 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~~------~~gwr~~f 154 (459)
++.|..+++++ ++..+.-.....+|.++.-.+........ ..+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 88888888888888877766643332211 23468888
Q ss_pred HhhhHHHHHHH-HHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHH
Q 012626 155 GLAAAPALMMT-VGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQL 233 (459)
Q Consensus 155 ~~~~~~~~~~~-~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (459)
.+.++.-++.. ...+++||.|+....++...-... .-++....+++..| .+-
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~-----------------------g~~~l~~t~k~~~~----~~~ 282 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRF-----------------------GFKRLWRTFKEIRK----LRQ 282 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHH-----------------------HHHHHHHHHHHHHh----ChH
Confidence 88888766554 455668887631000000000000 00000112222222 223
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCc--hhhhhhhHHHHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR--ALLISGGIQMITC 310 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~~ 310 (459)
...+++..+....+...+......+.+ .+|++..+.........+..++|.++.+++.||+|.| +.+........+.
T Consensus 283 ~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i 362 (477)
T PF11700_consen 283 LFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIII 362 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 444555566666667777777777766 5999999999999999999999999999999999999 6766655544333
Q ss_pred HHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHH
Q 012626 311 QVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF 390 (459)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 390 (459)
.+...+-.. +. ....++.+...+...+.+...+ ...+...++.+|+.|+++.+..+|++...+...+.++|.++
T Consensus 363 ~~~g~~G~~----~~-~~g~~~~~~f~~~a~~~G~~~G-~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~ 436 (477)
T PF11700_consen 363 PLYGLFGFW----PS-FFGLKSPWEFWVLAVLIGLFMG-GIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF 436 (477)
T ss_pred HHHHHHHhh----hc-ccCcccHHHHHHHHHHHHHHhh-hHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 322222000 00 0011233434444445555555 44455678899999999999999999999999999999999
Q ss_pred HHHHhhcc-chhHHHHHHHHHHHHHhheeeccCCCCC
Q 012626 391 LTLLCSFK-FGIFLFFAGWVTIMTIFVYFFLPETKGV 426 (459)
Q Consensus 391 ~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 426 (459)
|.+.+..+ ....+....+..+++++++..++.+|++
T Consensus 437 g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 437 GLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGR 473 (477)
T ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhh
Confidence 99999887 5566666667777777777777665544
No 103
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=6e-21 Score=178.10 Aligned_cols=379 Identities=10% Similarity=0.072 Sum_probs=238.9
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhh----hccchhHHHH-HHHHHHHHHHHHHHHHhHH-------------
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTR----DYGRRASIIC-GGISFLLGAALNAAAANLA------------- 84 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~~~~-~~~~~~~~~~~~~~~~~~~------------- 84 (459)
+++|+++.+.+++..+..+...+.+++.|+++| |+||||.++. +.....++.++.+++++.+
T Consensus 32 ~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~ 111 (477)
T TIGR01301 32 QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKP 111 (477)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchh
Confidence 457899999999999999999999999999999 5999998877 4666667777777776643
Q ss_pred ----HHHHHHHHHhhcccccchhhhHHHHhccCCCcc--hHHHHHHHHHHHHHHHHHHHHhhhhhccc-------c----
Q 012626 85 ----MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLR--GGLNMMFQLATTLGIFTANMINYGTQKLE-------T---- 147 (459)
Q Consensus 85 ----~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~~~~~~-------~---- 147 (459)
.++++-.+..++.....++..+++.|.+|+++| +.+.++.+...++|.++|+.++......+ .
T Consensus 112 ~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~ 191 (477)
T TIGR01301 112 RAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGV 191 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccc
Confidence 223333344457777788889999999998865 58999999999999999999854321111 0
Q ss_pred --chhHHHHHhhhHHHHHHHHHH-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHH
Q 012626 148 --WGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNI 224 (459)
Q Consensus 148 --~gwr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (459)
.+.|..|++.++..++..+.. +..+|.|... +++.++ + +.++ .++.+.+..++++
T Consensus 192 ~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~--~---~~~~---------------~~~~~~~~~~~~i 249 (477)
T TIGR01301 192 SCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFIN--S---EAAP---------------PSKHGEEAFFGEL 249 (477)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchh--h---hccc---------------ccccchhhhHHHH
Confidence 267899999888877776655 4578876211 000000 0 0000 0000011223344
Q ss_pred hccc-chhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh--cCCCCch----------hHHHHHHHHHHHHHHHHHHHHHH
Q 012626 225 LERR-NRPQLVMAIFMPMFQILTGINSILFYAPVLFQS--MGFKGDA----------SLYSSAMTGAVLASSTLISIATV 291 (459)
Q Consensus 225 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~----------~~~~~~~~~~~~~~~~~~~g~l~ 291 (459)
++.. ..++....+++..++.+.++..+..|.+.+..+ ++-++.+ ..+......+...+.+++..++.
T Consensus 250 ~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~ 329 (477)
T TIGR01301 250 FGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLC 329 (477)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3321 223334445555555555666666676666543 4433211 22334455555567777788899
Q ss_pred HhhCC-chhhhhhhHHHHHHHHHHHHHHhhccC--C----Ccc-ccchh-hhHHHHHHHHHHHHHhhccccccccccccc
Q 012626 292 DKLGR-RALLISGGIQMITCQVIVSIILGLKFG--P----NQE-LSKSF-SILVVVVICLFVLAFGWSWGPLGWTVPSEI 362 (459)
Q Consensus 292 d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (459)
+|+|+ |+....+.++.++++....+......+ + ... .+... .+..+......+...+.. ..++++++++.
T Consensus 330 ~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~-~siPfal~s~~ 408 (477)
T TIGR01301 330 RGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAIT-YSIPFALASIR 408 (477)
T ss_pred HHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHH-HHHhHHHHHHH
Confidence 99985 566677777777777766654311000 0 000 00001 244455555555555533 44668888898
Q ss_pred CCh--hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHH-HHHhheeeccCCC
Q 012626 363 FPL--ETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK--FGIFLFFAGWVTI-MTIFVYFFLPETK 424 (459)
Q Consensus 363 ~p~--~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l-~~~~~~~~~~~~~ 424 (459)
.|+ +..|..+|+.|.+..+...+.....|.+.+..+ ....+.++++..+ .++...+.+|+.+
T Consensus 409 ~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 409 SSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred ccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 884 456999999999999999999988888666555 3345555555554 4455556666654
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.89 E-value=1.8e-22 Score=191.93 Aligned_cols=392 Identities=11% Similarity=0.014 Sum_probs=242.8
Q ss_pred hhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhcc-----chhHHHHHHHHHH-HHHHHHHHH
Q 012626 7 KFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYG-----RRASIICGGISFL-LGAALNAAA 80 (459)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~G-----rr~~~~~~~~~~~-~~~~~~~~~ 80 (459)
+-.+........+.+++++|+|+++++...+...+...+-.+ +|+++||++ ||+.++++.++.+ ++....+..
T Consensus 38 qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~ 116 (468)
T TIGR00788 38 KGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGK 116 (468)
T ss_pred hhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccc
Confidence 333333344566677888999999999999999999999655 999999998 7788888877763 433333333
Q ss_pred HhHH-HHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHH---HHHHHHHHHHHHHHHHhhhhhccccchhHHHHHh
Q 012626 81 ANLA-MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNM---MFQLATTLGIFTANMINYGTQKLETWGWRLSLGL 156 (459)
Q Consensus 81 ~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~---~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~ 156 (459)
++.. ...+.+++.+++.+...+++.++..|..+ +++....+ ......++|.++|+.+ .+...+..+||..|++
T Consensus 117 ~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l--~G~l~~~~~~~~~f~~ 193 (468)
T TIGR00788 117 VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLL--GGPLLDKTLTRILFLI 193 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHH--HHHHHHhcCcchHHHH
Confidence 4543 44448899999999999999999999998 55544333 3333445899999888 5555566789999999
Q ss_pred hhHHHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHH
Q 012626 157 AAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMA 236 (459)
Q Consensus 157 ~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (459)
.+++.++..+..++++|++.....+.+.++.. ....... ... +..++......+.++++..++....
T Consensus 194 ~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~---------~~~~~~~-~~~---~~~~~~~~~l~~~l~~~~i~~~l~f 260 (468)
T TIGR00788 194 TAALLLLQLFVSNLSKERRAFVRPRIGTYLEM---------NMALLTL-GVL---ANVKVQILGLRGAIQLLEIAKPLIF 260 (468)
T ss_pred HHHHHHHHHHHHHhcccccccccccccccchh---------hhhhhhh-hHH---HHHHHHHHHHHHHHhcHHHHHHHHH
Confidence 88888777666677788531000000000000 0000000 000 0000001112223333332222222
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHH
Q 012626 237 IFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSI 316 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 316 (459)
.++... .... .....+. ...+..|+++...|......+++.+++..+.+++.+|++.|+.+..+....+++......
T Consensus 261 ifl~~~-~~~~-~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~ 337 (468)
T TIGR00788 261 IFLSYA-NLPG-ASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLI 337 (468)
T ss_pred HHHHHh-hcCC-CCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCcee
Confidence 222011 1111 1111111 111348999999999999999999999999999999999999988877776665544321
Q ss_pred HHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 317 ILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 396 (459)
... ........ ...+.......+...+.+..+.+. ..++.+..|++.+++.+++.+.+.++|..+++.+.+.+.+.
T Consensus 338 l~~-~~~~~~gi--~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 338 LVK-RWNLAFGI--SDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred eee-ccccccCC--CCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 00000000 112233334455556666666666 57888999999999999999999999999999999999988
Q ss_pred cc-----chhHHHHHHHHHH---HHHhheeeccC
Q 012626 397 FK-----FGIFLFFAGWVTI---MTIFVYFFLPE 422 (459)
Q Consensus 397 ~~-----~~~~~~~~~~~~l---~~~~~~~~~~~ 422 (459)
.| +...+....++.+ +.+....++|+
T Consensus 414 ~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 414 IGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred cCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77 5555544444433 33333345565
No 105
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=5.7e-23 Score=169.89 Aligned_cols=363 Identities=13% Similarity=0.098 Sum_probs=228.4
Q ss_pred hhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhh-ccchhHHHHHHHHHHHHHHHHH---HHHhHHHHHHHH
Q 012626 15 KKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNA---AAANLAMLLTGR 90 (459)
Q Consensus 15 ~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r 90 (459)
.+.+.+.+.|.+++.++..++.+.|.....+-++++|++.|| +|-|..-++-+....++.++++ ..+.+|.+..+|
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GR 143 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGR 143 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhh
Confidence 345556677888999999999999999999999999999997 6877655555555566666554 468999999999
Q ss_pred HHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccc-------hhHH---HHHhhhHH
Q 012626 91 ILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETW-------GWRL---SLGLAAAP 160 (459)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~-------gwr~---~f~~~~~~ 160 (459)
++.|+|.-..-.+-+.++.-|+..||.+.++|+.....-+|..+--.+ ..++.+.. |-.. ...+....
T Consensus 144 F~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~l--m~~ly~~~~~~~~~~ghT~LG~~l~~~~~t 221 (459)
T KOG4686|consen 144 FLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLL--MPFLYDTMGRMFPGVGHTLLGLWLCFEVKT 221 (459)
T ss_pred eeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeee--cHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 999999888888889999999999999999999998888887654333 11111110 0000 00000011
Q ss_pred HHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHH
Q 012626 161 ALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMP 240 (459)
Q Consensus 161 ~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (459)
+....+...-+ .| .++.+++.+.+.++.. .+.+| ..+ .....+-++.....
T Consensus 222 c~~slical~l----g~-----~D~rAerilh~e~g~~---------------Ge~pk--Ltd---v~~f~ppfw~~~ii 272 (459)
T KOG4686|consen 222 CKQSLICALSL----GL-----SDDRAERILHLEEGFL---------------GEEPK--LTD---VNTFYPPFWVLVII 272 (459)
T ss_pred HHHHHHHHHHh----hh-----hhhHHHHHHhhhcCcc---------------cCCcc--ccc---ccccCccHHHHHHH
Confidence 11111100000 00 0011111111100000 00001 111 11122223444444
Q ss_pred HHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHh
Q 012626 241 MFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (459)
.++.......+....|.++++ +|+++..++.+.+.......+...+.|.++||.|++-..+.+.....+..-....+.
T Consensus 273 cv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft- 351 (459)
T KOG4686|consen 273 CVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT- 351 (459)
T ss_pred HHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh-
Confidence 444555556666677777766 999999999999988888889999999999999999776665544443333222221
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK- 398 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~- 398 (459)
.+-+...+.+.+..+.+.... .|..++.+.|.++.|++.|+++.+.++|-++.|.+.|.+.|+.+
T Consensus 352 -------------~lsPy~~m~~lGLsysllAcs-lWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~ 417 (459)
T KOG4686|consen 352 -------------FLSPYTSMTFLGLSYSLLACS-LWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS 417 (459)
T ss_pred -------------hccHHHHHHHHhhhHHHHHHH-HhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc
Confidence 111223333444444333222 36777888999999999999999999999999999999998766
Q ss_pred c---hhHHHHHHHHHHHHHhheeeccCC
Q 012626 399 F---GIFLFFAGWVTIMTIFVYFFLPET 423 (459)
Q Consensus 399 ~---~~~~~~~~~~~l~~~~~~~~~~~~ 423 (459)
+ ..++...+...+....+.+.+.++
T Consensus 418 y~~le~ffl~~~~~aL~svgil~~~N~k 445 (459)
T KOG4686|consen 418 YDNLEAFFLIIGLMALTSVGILFYLNKK 445 (459)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhheecc
Confidence 2 345555555555555554544433
No 106
>PRK11462 putative transporter; Provisional
Probab=99.89 E-value=5.1e-20 Score=175.03 Aligned_cols=327 Identities=9% Similarity=0.024 Sum_probs=201.7
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhhh----ccch-hHHHHHHHHHHHHHHHHHHHHh------HHHHHHHHH
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGRR-ASIICGGISFLLGAALNAAAAN------LAMLLTGRI 91 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr----~Grr-~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~ 91 (459)
+.+|+++..+|.+..+.-+.-++..|+.|.++|| +||| +.++++....+++..++...++ +..+.+.-+
T Consensus 38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~ 117 (460)
T PRK11462 38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYT 117 (460)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 4569999999999999999999999999999996 7976 5556677788887776654442 445666667
Q ss_pred HHhhcccccchhhhHHHHhccC-CCcchHHHHHHHHHHHHHHHHHHHHhhhhhc-----cccchhHHHHHhhhHHHHHHH
Q 012626 92 LLGVGIGFGNQAVPLYLSEMAP-THLRGGLNMMFQLATTLGIFTANMINYGTQK-----LETWGWRLSLGLAAAPALMMT 165 (459)
Q Consensus 92 l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~-----~~~~gwr~~f~~~~~~~~~~~ 165 (459)
+..++......+-.++..|..+ ++||++..++...+..+|..+++.+...... ....+|+....+.+++.++..
T Consensus 118 ~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 118 LLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 7788888888888999999997 7899999999999999888777655221111 112468887777777766655
Q ss_pred HHHhc-cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhh
Q 012626 166 VGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQI 244 (459)
Q Consensus 166 ~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (459)
...++ .+|.++. +. ++.+.++..+..++++..+......++...
T Consensus 198 ~i~~~~~kE~~~~-----~~----------------------------~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~-- 242 (460)
T PRK11462 198 AFCFFTTKERVEA-----PP----------------------------TTTSMREDLRDIWQNDQWRIVGLLTIFNIL-- 242 (460)
T ss_pred HHHHhcceeccCC-----Cc----------------------------cCCCHHHHHHHHhCChHHHHHHHHHHHHHH--
Confidence 44433 4553310 00 000011223344444443333222222222
Q ss_pred hcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccC
Q 012626 245 LTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 323 (459)
Q Consensus 245 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (459)
..........++.+. .|. +...+.......+..+++.++++++.||+++|+....+.....+..+++.+.
T Consensus 243 --~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~------ 313 (460)
T PRK11462 243 --AVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV------ 313 (460)
T ss_pred --HHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh------
Confidence 112222222333333 232 3334556667778888999999999999999988765444333322222221
Q ss_pred CCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCC-------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 324 PNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 396 (459)
+...........++.+.+.+ ...++.+++.+|..+ .+..|...+.......+|..+++.+.|.+.+.
T Consensus 314 -----~~~~~~~~~~~~~l~g~~~~-~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 314 -----PMQASITMFVFIFVIGVLHQ-LVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred -----chhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112222223333333332 333444566666655 33345556777788999999999999998876
Q ss_pred ccc
Q 012626 397 FKF 399 (459)
Q Consensus 397 ~~~ 399 (459)
.|+
T Consensus 388 ~Gy 390 (460)
T PRK11462 388 GGY 390 (460)
T ss_pred cCC
Confidence 554
No 107
>PRK09848 glucuronide transporter; Provisional
Probab=99.88 E-value=6.5e-21 Score=181.86 Aligned_cols=331 Identities=10% Similarity=0.045 Sum_probs=199.3
Q ss_pred CCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc----cchhHH-HHHHHHHHHHHHHHHHHH-------hHHHHH
Q 012626 20 HENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY----GRRASI-ICGGISFLLGAALNAAAA-------NLAMLL 87 (459)
Q Consensus 20 ~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~----Grr~~~-~~~~~~~~~~~~~~~~~~-------~~~~l~ 87 (459)
..++.+|++..++|.+.+...+..++..++.|+++||. ||||.. ..+.+...+...+....+ .....+
T Consensus 34 y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (448)
T PRK09848 34 YYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAY 113 (448)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHH
Confidence 35566799999999999999999999999999999996 777644 556555554444432111 223345
Q ss_pred HHHHHHhhcccccchhhhHHHHhccC-CCcchHHHHHHHHH-----HHHHHHHHHHHhhhhhccccchhHHHHHhhhHHH
Q 012626 88 TGRILLGVGIGFGNQAVPLYLSEMAP-THLRGGLNMMFQLA-----TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPA 161 (459)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~ 161 (459)
+..++.+++.+...++..++..|..+ +++|.+..++-..+ ..+|..++|.+..........+|.....+.++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~ 193 (448)
T PRK09848 114 LTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAG 193 (448)
T ss_pred HHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 55677888888888888888888775 46788877666543 3355556666532110000012221122233333
Q ss_pred HHHHHHH-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHH
Q 012626 162 LMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMP 240 (459)
Q Consensus 162 ~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (459)
++..+.. ...||+++. + +++...+..++.+++++... ...+.
T Consensus 194 ~~~~~~~~~~~~e~~~~----~-----------------------------~~~~~~~~~~~~l~~n~~f~----~~~~~ 236 (448)
T PRK09848 194 MVLYFICFKSTRENVVR----I-----------------------------VAQPSLKISLQTLKRNRPLF----MLCIG 236 (448)
T ss_pred HHHHHHHHcCcEeccCC----C-----------------------------ccCCCHHHHHHHHhCCchHH----HHHHH
Confidence 3332222 335554310 0 00000112244566555532 22232
Q ss_pred HHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHh
Q 012626 241 MFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (459)
.+.............|++.++ +|.++...++......++.+++.++.+++.||+++|+.+..+..+..++.+.+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~-- 314 (448)
T PRK09848 237 ALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV-- 314 (448)
T ss_pred HHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--
Confidence 333333344455556666665 67665555554454466778889999999999999999988887776666554432
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChh-------hhhhhhHHHHHHHHHHHHHHHHHHHH
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE-------TRSAGQSITVAVNLFFTFVIAQIFLT 392 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~g~~~~~~~~g~~~~~~~~~~ 392 (459)
+..+.+.......+.+.+.+... +..+++.+|..|.+ .+|...|+.+....+|..+++.+.+.
T Consensus 315 ---------~~~~~~~~~~~~~l~g~G~~~~~-~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 315 ---------SVWSLPVALVALAIASIGQGVTM-TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222333333444444444443 33456767777643 46889999999999999999999999
Q ss_pred HHhhccc
Q 012626 393 LLCSFKF 399 (459)
Q Consensus 393 ~~~~~~~ 399 (459)
+.+..|+
T Consensus 385 ~l~~~G~ 391 (448)
T PRK09848 385 ILGLSGY 391 (448)
T ss_pred HHHHcCC
Confidence 8876654
No 108
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.88 E-value=4.2e-20 Score=168.54 Aligned_cols=330 Identities=14% Similarity=0.136 Sum_probs=238.3
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhh----ccc-hhHHHHHHHHHHHHHHHHHHHHh------HHHHHHHH
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGR-RASIICGGISFLLGAALNAAAAN------LAMLLTGR 90 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr----~Gr-r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r 90 (459)
.+.+|+++...|.+..+.-+--++..|+.|.+.|| +|| |+.++++.+..++.+.++-.+++ ....++.-
T Consensus 40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY 119 (467)
T COG2211 40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTY 119 (467)
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHH
Confidence 44579999999999999999999999999999995 786 56778888999999988877763 45667777
Q ss_pred HHHhhcccccchhhhHHHHhccC-CCcchHHHHHHHHHHHHHHHHHHHH-----hhhhhccccchhHHHHHhhhHHHHHH
Q 012626 91 ILLGVGIGFGNQAVPLYLSEMAP-THLRGGLNMMFQLATTLGIFTANMI-----NYGTQKLETWGWRLSLGLAAAPALMM 164 (459)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~-----~~~~~~~~~~gwr~~f~~~~~~~~~~ 164 (459)
++.+++......+-.++..|+.+ ++||.+..++-..+.++|..+...+ ..........||+..-.+.++++++.
T Consensus 120 ~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~ 199 (467)
T COG2211 120 MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVIL 199 (467)
T ss_pred HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Confidence 89999999999999999999985 7899999999999999996655433 21222222468999998888888877
Q ss_pred HHHHhc-cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchH----HHhcccchhHHHHHHHH
Q 012626 165 TVGGIL-LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFR----NILERRNRPQLVMAIFM 239 (459)
Q Consensus 165 ~~~~~~-~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 239 (459)
.+..++ .+|.+.. .+..+...+.+++ .+++++..+.. ++
T Consensus 200 ~l~~~~~v~ER~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~Nrp~~~~----l~ 243 (467)
T COG2211 200 LLFCFFNVKERVVE--------------------------------TQPTKTGVKLKLKDSFLLIFKNRPLLLL----LL 243 (467)
T ss_pred HHHHHHHhhcccCc--------------------------------cccCcccccccHHHHHHHHHccchHHHH----HH
Confidence 766655 6665410 0000001123333 34455443322 22
Q ss_pred HHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHH
Q 012626 240 PMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIIL 318 (459)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (459)
...+.....+.-.....++.+. .|.+.............+.+++.++..++.+|+|+|++..++.++..++.+++.+..
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc
Confidence 3333444445555555555554 677777777778888888888899999999999999999999888888888777652
Q ss_pred hhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCC-------hhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 012626 319 GLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-------LETRSAGQSITVAVNLFFTFVIAQIFL 391 (459)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~~~~~~~~ 391 (459)
.++.+..++..++...+.+ ...++.|++++|... .+..|...|...++.-+|.+++..+.|
T Consensus 324 -----------~~~~~l~~~~~~i~~~g~~-~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g 391 (467)
T COG2211 324 -----------AGSVVLIVVALIIAGVGTG-IANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPG 391 (467)
T ss_pred -----------CcchHHHHHHHHHHHHHhh-ccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 2334444444455555555 445677899888863 345677889999999999999999999
Q ss_pred HHHhhccc
Q 012626 392 TLLCSFKF 399 (459)
Q Consensus 392 ~~~~~~~~ 399 (459)
++.+..||
T Consensus 392 ~~L~~~Gy 399 (467)
T COG2211 392 WILGAIGY 399 (467)
T ss_pred HHHHHcCC
Confidence 99887764
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.88 E-value=2.1e-20 Score=177.15 Aligned_cols=332 Identities=14% Similarity=0.144 Sum_probs=237.7
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhh----hccchh-HHHHHHHHHHHHHHHHHHH-H-------hHHHHH
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTR----DYGRRA-SIICGGISFLLGAALNAAA-A-------NLAMLL 87 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~d----r~Grr~-~~~~~~~~~~~~~~~~~~~-~-------~~~~l~ 87 (459)
..+.+|+++...|.+..+..+..++..|+.|.++| |+|||| .+++|....+++..++... + ....+.
T Consensus 28 ~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~ 107 (428)
T PF13347_consen 28 YTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLF 107 (428)
T ss_pred HHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHH
Confidence 34556999999999999999999999999999999 899765 5667888888888877655 4 234567
Q ss_pred HHHHHHhhcccccchhhhHHHHhccC-CCcchHHHHHHHHHHHHHHHHHHHHhhhhh--ccc--c-chhHHHHHhhhHHH
Q 012626 88 TGRILLGVGIGFGNQAVPLYLSEMAP-THLRGGLNMMFQLATTLGIFTANMINYGTQ--KLE--T-WGWRLSLGLAAAPA 161 (459)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~--~~~--~-~gwr~~f~~~~~~~ 161 (459)
+.-++..++......+..++..|..+ +++|.+..+.-..+..+|.++...+..... ..+ . .+|++..++.+++.
T Consensus 108 ~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~ 187 (428)
T PF13347_consen 108 VFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVG 187 (428)
T ss_pred HHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHH
Confidence 77777899999999999999999997 578999999999988888865554421111 111 1 27999999988888
Q ss_pred HHHHHHHh-ccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHH
Q 012626 162 LMMTVGGI-LLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMP 240 (459)
Q Consensus 162 ~~~~~~~~-~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (459)
++..+... ..+|.++ + .++++++.+.++.+++.++++..+......++.
T Consensus 188 ~v~~~i~~~~~ke~~~------~------------------------~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~ 237 (428)
T PF13347_consen 188 LVFFLITFFFVKERSV------E------------------------VTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQ 237 (428)
T ss_pred HHHhhhhhheeeeccc------c------------------------ccccccccccccchhhhcccchHHHHHHHHHHH
Confidence 87766554 4677210 0 001111222244566666666544433333333
Q ss_pred HHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHh
Q 012626 241 MFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (459)
...........+++.+. .|.+ ...+.......+..+++.++.++++||+|+|+....+....+++.+.+.+..
T Consensus 238 ----~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~- 311 (428)
T PF13347_consen 238 ----WLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG- 311 (428)
T ss_pred ----HhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH-
Confidence 33334444455666655 4544 5566777788899999999999999999999999999988888877766652
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCCh-------hhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL-------ETRSAGQSITVAVNLFFTFVIAQIFLT 392 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~g~~~~~~~~g~~~~~~~~~~ 392 (459)
..+.+...+...+.+.+.+... ...+++.+|..+. +..|...|+.+....++..+++.+.+.
T Consensus 312 ----------~~~~~~~~i~~~l~gi~~~~~~-~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 312 ----------PGSPWLVLILFILAGIGYGAFF-VIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred ----------hhhHHHHHHHHHHhHhhhcccc-cccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 1345556666666666666554 5557888888863 346888999999999999999999999
Q ss_pred HHhhccc
Q 012626 393 LLCSFKF 399 (459)
Q Consensus 393 ~~~~~~~ 399 (459)
+.+..|+
T Consensus 381 ~l~~~Gy 387 (428)
T PF13347_consen 381 LLALVGY 387 (428)
T ss_pred HHHHhCc
Confidence 8876653
No 110
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.87 E-value=3.2e-19 Score=167.32 Aligned_cols=362 Identities=13% Similarity=0.066 Sum_probs=207.9
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhhcccc
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAA-NLAMLLTGRILLGVGIGF 99 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~ 99 (459)
++++|+++.+.+.+.+.+.....++.+++|+++||+ ||||++.++.++..++.++.+..+ +...+.++..+.++|.|.
T Consensus 37 ~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~ 116 (493)
T PRK15462 37 TNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGL 116 (493)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccc
Confidence 445799999999999999999999999999999999 999999999999999988776543 223344444555566677
Q ss_pred cchhhhHHHHhccCCC--cchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhcc----CC
Q 012626 100 GNQAVPLYLSEMAPTH--LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL----PE 173 (459)
Q Consensus 100 ~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~----~e 173 (459)
..+...++++|.+|++ +|..++++...+.++|..++|.+ .....+..|||+.|.+.++..++..+..++. ++
T Consensus 117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l--~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~ 194 (493)
T PRK15462 117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA--CGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTH 194 (493)
T ss_pred ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH--HHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 7787889999999875 79999999999999999999999 5666667799999998766544444333221 11
Q ss_pred ChHHHHhhCcHHHHHH--HHHH--Hh-------CCCcccHHHHHHHHHH---Hhhccc-CCchHHHhcccchhHHHHH--
Q 012626 174 TPNSLIERGKKVEGRR--VLEK--IR-------GTKEVNAEYQDMVDAS---ELANSI-KHPFRNILERRNRPQLVMA-- 236 (459)
Q Consensus 174 ~p~~l~~~~~~~~~~~--~~~~--~~-------~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~-- 236 (459)
.... ..+..+++... .... +. .......+.....-.. ....-- ....++ .+...++++...
T Consensus 195 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~er~r~~~~~~ 272 (493)
T PRK15462 195 TRGV-NKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA-ENQKQRKELGLIVT 272 (493)
T ss_pred CCCC-CCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHhhHHHHHH
Confidence 1000 00000000000 0000 00 0000000000000000 000000 000000 001111222111
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHh------cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCC--ch-----hhhhh
Q 012626 237 IFMPMFQILTGINSILFYAPVLFQS------MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGR--RA-----LLISG 303 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~--~~-----~~~~~ 303 (459)
+++.....+..+.....-.+.+.++ .|++ ....+..+...+..++..++..++-.|..| |. -+..+
T Consensus 273 l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g 351 (493)
T PRK15462 273 LTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALG 351 (493)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHH
Confidence 1111221222222222222333322 2332 235667788888887777777766566532 21 25567
Q ss_pred hHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHH-HHH
Q 012626 304 GIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVN-LFF 382 (459)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g 382 (459)
.+..+++.+.+....... .++ .. .+..+++...++........+|+..+.++++.|++.+|..+|+..... .++
T Consensus 352 ~~~~g~~f~~l~~~~~~~-~~~---~~-~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~ 426 (493)
T PRK15462 352 LGLMSAGFCILTLSARWS-AMY---GH-SSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIA 426 (493)
T ss_pred HHHHHHHHHHHHHHHhhc-CCC---CC-cCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 777777766665433211 111 11 233334555555566777889999999999999999999999986633 566
Q ss_pred HHHHHHHHHHH
Q 012626 383 TFVIAQIFLTL 393 (459)
Q Consensus 383 ~~~~~~~~~~~ 393 (459)
..++..+.+..
T Consensus 427 ~~~~g~~~~~~ 437 (493)
T PRK15462 427 NYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHh
Confidence 66665555544
No 111
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.86 E-value=1.5e-19 Score=162.34 Aligned_cols=280 Identities=11% Similarity=0.079 Sum_probs=191.9
Q ss_pred HHHHhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc-----------
Q 012626 78 AAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE----------- 146 (459)
Q Consensus 78 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~----------- 146 (459)
+...+|+.++++-++.|.|.+...+..+.++++..+++++++.+++.+.+.++|..++|.++.......
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 356789999999999999999999999999999999999999999999999999999999964333211
Q ss_pred ---cchhHHHHHhhhHHHHHHHHHHhc--cCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCch
Q 012626 147 ---TWGWRLSLGLAAAPALMMTVGGIL--LPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPF 221 (459)
Q Consensus 147 ---~~gwr~~f~~~~~~~~~~~~~~~~--~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (459)
...||++|++.+.+.++..+.+.+ +||.++ ++.++ ..+ ++ ....
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~~~~-----------------------~~~-~~--~~~~ 133 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----ADVAR-----------------------VSS-GD--TTQK 133 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----ccccc-----------------------ccc-cc--ccch
Confidence 147999999776665555444433 455320 00000 000 00 0001
Q ss_pred HHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCch
Q 012626 222 RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS---MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRA 298 (459)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 298 (459)
++.+++ +.++...+..++..........|.+.|+++ +|+++.+.+........+.++|+++.+++.||+++|+
T Consensus 134 ~~~~~~----~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~ 209 (310)
T TIGR01272 134 TSAFQF----THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR 209 (310)
T ss_pred hhHHhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 122222 223345555566665677788888888864 5899999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHH
Q 012626 299 LLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAV 378 (459)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 378 (459)
.+..+..+..++.++.... + .........+.+.+.+..++.. .+...+..|++ .+++.++. ..
T Consensus 210 ~l~~~~~l~~~~~~l~~~~-------------~-~~~~~~~~~l~g~~~s~i~P~~-~s~a~~~~~~~-~~~asai~-~~ 272 (310)
T TIGR01272 210 YLAFNAFLAVLLSIGAALT-------------H-GYVAMWFVLALGLFNSIMFPTI-FSLALNALGRH-TSQGSGIL-CL 272 (310)
T ss_pred HHHHHHHHHHHHHHHHHHc-------------C-CHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhh-hhhhHHHH-HH
Confidence 8877766555554333221 1 1112233344555555454443 46666767643 56666764 67
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 012626 379 NLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 409 (459)
Q Consensus 379 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (459)
+.+|+++.|.+.|.+.|..+....+.+...+
T Consensus 273 ~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 273 AIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 8899999999999999988866555544433
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.85 E-value=1.9e-20 Score=169.28 Aligned_cols=356 Identities=15% Similarity=0.126 Sum_probs=215.7
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHH--HHHHHH-HHHH----HhHH-HHHHHHHH
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISF--LLGAAL-NAAA----ANLA-MLLTGRIL 92 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~--~~~~~~-~~~~----~~~~-~l~~~r~l 92 (459)
++++.|+|.+++|.+.++..+...+.+|+.|.++||+|.||-++..+.+. ..+... ..+. .|++ ..+++-+.
T Consensus 34 L~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~ 113 (412)
T PF01306_consen 34 LTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIY 113 (412)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTT
T ss_pred HccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456999999999999999999999999999999999666544433222 222222 1222 2322 23333344
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhcc-
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL- 171 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~- 171 (459)
.|+...+..|+..+++.++. ++.+.-.|-.....++|.+++..+++ ...+ .+-+..||+....+++..++.++.
T Consensus 114 l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G--~L~~-i~p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 114 LGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAG--ILFN-INPNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp TTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred HHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhh--eeee-eCccHHHHHHHHHHHHHHHHHHHcC
Confidence 45555556666777766665 23344556666777777777777743 2222 245678888777666655554443
Q ss_pred CCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHH
Q 012626 172 PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSI 251 (459)
Q Consensus 172 ~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (459)
|+.++....++. +..++++.+.++..+..+.++ +|.+.+........+..+
T Consensus 189 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~l~k~~~-fw~~~l~v~g~~~~Y~vf 239 (412)
T PF01306_consen 189 PDVPPQAEVADA----------------------------LGAKKDKVSLKDVLSLFKMRN-FWFFVLFVIGVAAIYDVF 239 (412)
T ss_dssp --SSSSS-SSTT----------------------------SSS------HHHHHHHTTSHH-HHHHHHHHHHHHHHHHHH
T ss_pred CcCchhhhhhcc----------------------------cccCCCCCcHHHHHHHhcchh-HHHHHHHHHHHHHHHHHH
Confidence 333311000000 000111222343332222222 333333333333445555
Q ss_pred HHhHHHHHHhc----CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcc
Q 012626 252 LFYAPVLFQSM----GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 327 (459)
Q Consensus 252 ~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (459)
....+.+...+ +.+....|++.+...+.+++...+..++.+|+|.|+.++++..++.+-....++.
T Consensus 240 dqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~---------- 309 (412)
T PF01306_consen 240 DQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA---------- 309 (412)
T ss_dssp HHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-----------
T ss_pred HHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh----------
Confidence 55555555543 2334567888999999999999999999999999999999988888887777654
Q ss_pred ccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHH-HHHHHHHHHHHHHHHHHHHhhccch-hHHHH
Q 012626 328 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSIT-VAVNLFFTFVIAQIFLTLLCSFKFG-IFLFF 405 (459)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 405 (459)
++.+.....-.+-+.-+.....+. .-|+++.+|++..++...+. +...+++..+.+.+.|.+.|+.|+. ++++.
T Consensus 310 ---~~~~~i~~~klLH~~e~~l~lva~-fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylim 385 (412)
T PF01306_consen 310 ---TNPWVISLIKLLHALEFPLLLVAA-FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIM 385 (412)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHH
Confidence 335556666666666666555555 57889999999999999886 5778899999999999999999976 45555
Q ss_pred HHHHHHHHHhheeeccCCC
Q 012626 406 AGWVTIMTIFVYFFLPETK 424 (459)
Q Consensus 406 ~~~~~l~~~~~~~~~~~~~ 424 (459)
+.+.....++..+.+++.+
T Consensus 386 g~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 386 GLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHHheeeecCCC
Confidence 5555555555555555443
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.84 E-value=1.6e-18 Score=153.17 Aligned_cols=356 Identities=12% Similarity=0.051 Sum_probs=248.0
Q ss_pred CchhHHHHHHhHHHHHHHhhhhhhhhhhhccch-hHHHHHHHHHHHHHHHHHHHHh---HHHHHHHHHHHhhcccccchh
Q 012626 28 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRR-ASIICGGISFLLGAALNAAAAN---LAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 28 s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr-~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~ 103 (459)
+.+..+...++..+..++.+|+.|.++|+.|+| +.+-....+..++..+..++++ ++..++.-.+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 456678889999999999999999999999965 4555566666666666777655 456666778889998999999
Q ss_pred hhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc----------------cccchhHHHHHhhhHHHHHHHH-
Q 012626 104 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK----------------LETWGWRLSLGLAAAPALMMTV- 166 (459)
Q Consensus 104 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~----------------~~~~gwr~~f~~~~~~~~~~~~- 166 (459)
-.+++.+..++++-++..++-.....+|..+.-+....... .+...=|..+.+.++..++..+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 99999999999888888777666666666554433211111 1334578888888877666544
Q ss_pred HHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhc
Q 012626 167 GGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILT 246 (459)
Q Consensus 167 ~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (459)
+++..++.++-. ..... .....-++.+++++++.+++. +..+.+..+...-
T Consensus 216 m~~~v~~~~~~~---~~~~~----------------------~l~~g~k~L~~t~k~i~~~~~----i~~FLiA~~~~~D 266 (438)
T COG2270 216 MILNVHDAEKIS---SPPPT----------------------ALRNGFKELKSTFKEIRGRKN----LVLFLIARFFYID 266 (438)
T ss_pred HHhccccccccc---ccchH----------------------HHHHHHHHHHHHHHHHhcccc----hHHHHHHHHHHHh
Confidence 455566554200 00000 000011111334455554443 4445555556666
Q ss_pred chHHHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 247 GINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 247 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
+.+.+......+-. ++|++..+.........+..++|+++.|++.||+|.|+++..+.+...+.++......
T Consensus 267 Gv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~------- 339 (438)
T COG2270 267 GVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE------- 339 (438)
T ss_pred hHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc-------
Confidence 77777777777776 6999999999999999999999999999999999999988888777666665554431
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK-FGIFLF 404 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~ 404 (459)
..........+.+...+ .......++..+++|+++.++..|+++..++.....+|...+.+.+..+ ....+.
T Consensus 340 ------~~~~f~i~gll~g~s~G-~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 340 ------GELDFWILGLLVGTSLG-GAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred ------ccHHHHHHHHHHHHhcc-hHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 12222223333344444 3334557899999999999999999999999999999999999988776 345555
Q ss_pred HHHHHHHHHHhheeeccCCCCC
Q 012626 405 FAGWVTIMTIFVYFFLPETKGV 426 (459)
Q Consensus 405 ~~~~~~l~~~~~~~~~~~~~~~ 426 (459)
...+..+++++.+..+|+.+++
T Consensus 413 ~i~vll~iGl~~L~~v~~~~~~ 434 (438)
T COG2270 413 SIIVLLLIGLLLLLRVKVPGRR 434 (438)
T ss_pred HHHHHHHhhHhhEEeecCCCCc
Confidence 6666677777777777766443
No 114
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=3.9e-18 Score=151.51 Aligned_cols=363 Identities=13% Similarity=0.092 Sum_probs=236.6
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH------HhHH--HHHHHHHHHh
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA------ANLA--MLLTGRILLG 94 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~------~~~~--~l~~~r~l~G 94 (459)
..++ +....-|+..+|++.+....+++-|+.|++|-|...+++..+.++|..+-..+ +.++ ....+..+.+
T Consensus 73 ~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa 151 (480)
T KOG2563|consen 73 SFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAA 151 (480)
T ss_pred HHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHH
Confidence 3455 66677799999999999999999999999999999999999999999987665 3445 7778889999
Q ss_pred hcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc----cccchhHH--HHHhhhHHHHHHHHHH
Q 012626 95 VGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK----LETWGWRL--SLGLAAAPALMMTVGG 168 (459)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~----~~~~gwr~--~f~~~~~~~~~~~~~~ 168 (459)
.+.-.....-..+..-|++++||..+..+-.++..+|.++|.++.-.... .++..|-. .|+..+.++.+.+.+.
T Consensus 152 ~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~ 231 (480)
T KOG2563|consen 152 AAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALV 231 (480)
T ss_pred HhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777767888899999999999998888888888777666322222 22345655 3554444444333333
Q ss_pred -hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcc
Q 012626 169 -ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTG 247 (459)
Q Consensus 169 -~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (459)
+..+|.|+...+. .+....+.+-..+.++.++++. +....+++......
T Consensus 232 ~~~~~~~P~tPps~--------------------------s~~~~~~~~f~~si~~~~~n~~----F~il~~~ygi~~g~ 281 (480)
T KOG2563|consen 232 LFVFTKKPPTPPSA--------------------------SQAALQDASFPKSIKSCFKNRQ----FIILAICYGIGLGL 281 (480)
T ss_pred HHhcCCCCCCCCch--------------------------hHhhhhcCcHHHHHHHHHcCcc----HHHHHHHHhhhHHH
Confidence 2233333110000 0000001112344556666655 44444444444444
Q ss_pred hHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchh-hhhhhHHHHHHHHHHHHHHhhccCCCc
Q 012626 248 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRAL-LISGGIQMITCQVIVSIILGLKFGPNQ 326 (459)
Q Consensus 248 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (459)
++...+.+...+...|++...+|+......++++++.++.|.+.||.+.-+. ..+......++.+.+.....
T Consensus 282 F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~------- 354 (480)
T KOG2563|consen 282 FNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTL------- 354 (480)
T ss_pred HHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-------
Confidence 4555555444444578877889999999999999999999999999876444 44333333333222222210
Q ss_pred cccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc----chhH
Q 012626 327 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK----FGIF 402 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~ 402 (459)
.....+ .+...+...+.++.+..|+..-+..|..-|..-++..|+.+..+++.+.+-..+.+...+..+ +...
T Consensus 355 --~~~~~v-iv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~ 431 (480)
T KOG2563|consen 355 --FLGDSV-IVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPA 431 (480)
T ss_pred --cCCceE-ehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccc
Confidence 011122 233333444444556677877888888766778899999999999999999999998888776 4444
Q ss_pred HHHHHHHHHHHHhheeeccCCCCC
Q 012626 403 LFFAGWVTIMTIFVYFFLPETKGV 426 (459)
Q Consensus 403 ~~~~~~~~l~~~~~~~~~~~~~~~ 426 (459)
.+......++.+.+..+.++..+|
T Consensus 432 ~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 432 NIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred hhHhHHHHHHHHHHHhhhhhhHHh
Confidence 555555555555554555544333
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.77 E-value=9.5e-17 Score=145.37 Aligned_cols=360 Identities=18% Similarity=0.118 Sum_probs=225.6
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHhhccccc
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIGFG 100 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~ 100 (459)
.+|+|+++..-+.+.|.--.-+...++|+++||+ |+|+++..|.+++.+|.++.+.+. +...++++-.+.++|.|..
T Consensus 55 gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~ 134 (498)
T COG3104 55 GLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLF 134 (498)
T ss_pred cCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccc
Confidence 3789999999999999888888999999999995 999999999999999999998884 7889999999999999999
Q ss_pred chhhhHHHHhccCCC--cchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCC----
Q 012626 101 NQAVPLYLSEMAPTH--LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPET---- 174 (459)
Q Consensus 101 ~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~---- 174 (459)
-+...+++.|.+|++ +|...++++.++.++|..++|.+ .....+..||...|-..++-..+.++..+..+..
T Consensus 135 K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i--~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~ 212 (498)
T COG3104 135 KPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII--TGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGI 212 (498)
T ss_pred cccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH--HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCC
Confidence 999999999999854 47788999999999999999999 6677777899999999888777666555443211
Q ss_pred -----hHHHHhhCcHHHHHHHHHHH--------hCCCcccHHHHHH---HHH---HHhhcccCCchHHHhcccchhHHHH
Q 012626 175 -----PNSLIERGKKVEGRRVLEKI--------RGTKEVNAEYQDM---VDA---SELANSIKHPFRNILERRNRPQLVM 235 (459)
Q Consensus 175 -----p~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (459)
|.-+..+............. ...+..+...... ... .+..+.++.. .+..|....-++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl 291 (498)
T COG3104 213 GGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFL 291 (498)
T ss_pred CCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccH-HHHHHHHHHHHHHH
Confidence 11010000000000000000 0000000000000 000 0000011100 11111111112222
Q ss_pred HHHHHHHhhhcchHHHHHhHHHHHHh--cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCc-------hhhhhhhHH
Q 012626 236 AIFMPMFQILTGINSILFYAPVLFQS--MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR-------ALLISGGIQ 306 (459)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-------~~~~~~~~~ 306 (459)
...+.+....-....+..|.....++ +|++ -...+..+...+..++..++..++..|.+++ .-+..+...
T Consensus 292 ~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l 370 (498)
T COG3104 292 FAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLIL 370 (498)
T ss_pred HHHHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHH
Confidence 22233333333334444444443332 3332 3446678888888888887777777774332 223344445
Q ss_pred HHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHH
Q 012626 307 MITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVI 386 (459)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 386 (459)
+..+.+++.......-.+ +...+.++.+...+.......+.+|+..+++..+.|++..+..++........+..++
T Consensus 371 ~g~~fl~l~~~~~~~~~~----~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~ 446 (498)
T COG3104 371 AGLGFLILLLAGIWFGGP----SGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLG 446 (498)
T ss_pred HHHHHHHHHHHHHhhcCC----CCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhh
Confidence 555554444432211111 2233455566666667777888889989999999999998888888888877777777
Q ss_pred HHHHH
Q 012626 387 AQIFL 391 (459)
Q Consensus 387 ~~~~~ 391 (459)
..+.+
T Consensus 447 g~va~ 451 (498)
T COG3104 447 GQVAG 451 (498)
T ss_pred ceecc
Confidence 76666
No 116
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.75 E-value=2.4e-15 Score=133.81 Aligned_cols=350 Identities=13% Similarity=0.080 Sum_probs=228.5
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhcc-----chhH-HHHHHHHHHHHHHHHHHH-----H-------hH
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYG-----RRAS-IICGGISFLLGAALNAAA-----A-------NL 83 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~G-----rr~~-~~~~~~~~~~~~~~~~~~-----~-------~~ 83 (459)
-.|++++..-.+.+.+..++... ..+.+|+.||+.+ ||.. +..|.++...+..+.+++ . +.
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 34678899999999998887754 6899999999988 7754 455666666666555443 2 12
Q ss_pred ----HHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccch-hHHHHHh--
Q 012626 84 ----AMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWG-WRLSLGL-- 156 (459)
Q Consensus 84 ----~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~g-wr~~f~~-- 156 (459)
....+.-.+.|+|.+...++..+++.|..|+++|+++.++.....-+|.+++..+ .....+.+. -|..-.+
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~--~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIV--FGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHH--HHHHccccCHHHHHHHHHH
Confidence 2445566889999999999999999999999999999999999999999999988 444443332 2332222
Q ss_pred hhHHHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHH
Q 012626 157 AAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMA 236 (459)
Q Consensus 157 ~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (459)
.+++.++..++..+=.|.++.... ...++++...+..+++++.++..++.+..
T Consensus 164 ~a~i~~~l~~ia~wg~E~r~~~~~---------------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~f 216 (403)
T PF03209_consen 164 VALIALLLNLIALWGQEPRRSRRA---------------------------AAAERPRPPFREAWRQVWASPQARRFFVF 216 (403)
T ss_pred HHHHHHHHHHHHHHhcccCCcccc---------------------------cCCCCCCccHHHHHHHHHhCCChhHHHHH
Confidence 222222222222222232200000 00001111123345566666666666655
Q ss_pred HHHHHHhhhcchHHHHHhH-HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHH-hhCCchhhhhhhHHHHHHHHHH
Q 012626 237 IFMPMFQILTGINSILFYA-PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVD-KLGRRALLISGGIQMITCQVIV 314 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~~~ 314 (459)
+++..+.. ......+ |+=-+-+|++..+...+....+.+.++|..+.+++.. |.++++...+++....+++.++
T Consensus 217 l~l~t~a~----~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 217 LFLGTLAF----FMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHH----HhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 55544322 2222222 3333448999999999999999999999999998776 5777777777877777777666
Q ss_pred HHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 315 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
..... ..+.+.......+++++.+...... .+.+.++.++++.|+.+|.....+.+...++....|.+.
T Consensus 293 i~a~~----------~~~~~~~~~~~~l~G~g~G~f~vga-ls~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~ 361 (403)
T PF03209_consen 293 ILAGP----------LGSPWLFRPGVFLLGLGNGLFTVGA-LSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALR 361 (403)
T ss_pred HHHHh----------cccchHHHHHHHHHHHhhhHHHHHH-HHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55431 1334555555666666665544443 344558888899999999999999999999999999887
Q ss_pred hhc----------cchhHHHHHHHHHHHHHhh
Q 012626 395 CSF----------KFGIFLFFAGWVTIMTIFV 416 (459)
Q Consensus 395 ~~~----------~~~~~~~~~~~~~l~~~~~ 416 (459)
|.. +|...+..-++..+.++.+
T Consensus 362 D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 362 DLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred HHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 742 2444555555555555444
No 117
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.74 E-value=3.1e-17 Score=150.22 Aligned_cols=377 Identities=16% Similarity=0.185 Sum_probs=222.0
Q ss_pred hhhhhcCCCCCC-ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccc-hhHHHHHHHHHHHHHHHH-HHH---H-hHH
Q 012626 12 VYLKKKHAHENN-YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGR-RASIICGGISFLLGAALN-AAA---A-NLA 84 (459)
Q Consensus 12 ~~~~~~~~~~~~-~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Gr-r~~~~~~~~~~~~~~~~~-~~~---~-~~~ 84 (459)
++.+...|.+++ |.+.+.+..|++.++..++.+++++..|.++.|.+. |+.++.|.++..+++++. ++. + ..+
T Consensus 52 I~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y 131 (488)
T KOG2325|consen 52 IYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKY 131 (488)
T ss_pred EEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHH
Confidence 344445555544 678899999999999999999999999999999996 788899999999999998 433 3 578
Q ss_pred HHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccch-----------hHHH
Q 012626 85 MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWG-----------WRLS 153 (459)
Q Consensus 85 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~g-----------wr~~ 153 (459)
.++++|++.|+|.+ .....-+|+++....++|.|+++....+..+|.++||.+..........| +..+
T Consensus 132 ~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap 210 (488)
T KOG2325|consen 132 LMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAP 210 (488)
T ss_pred HHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchH
Confidence 99999999999976 45788999999999999999999999999999999998754333222212 3456
Q ss_pred HHhhhHHHHHHHHHH-hccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhH
Q 012626 154 LGLAAAPALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQ 232 (459)
Q Consensus 154 f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (459)
-|+.+++.++.++.. .++.|.++-..+++.+++ ++.+.+.+.. +.+ +..+..
T Consensus 211 ~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~------------------~~~~~~~~~~---~~~------~~d~~~ 263 (488)
T KOG2325|consen 211 AWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV------------------EEEKSDIEKV---KKP------KLDWVA 263 (488)
T ss_pred HHHHHHHHHHHHHHHHhheeecccCccccccccc------------------hhhccchhhh---ccC------ChhHHH
Confidence 677788877776655 446776521111100000 0000000000 000 111122
Q ss_pred HHHHHHHHHHhhhcchHH-HHHhHHHHHHhcCCCCchhHHH----HHHHHHHHHHHHHHHHHHH-HhhCCchhhhhhhHH
Q 012626 233 LVMAIFMPMFQILTGINS-ILFYAPVLFQSMGFKGDASLYS----SAMTGAVLASSTLISIATV-DKLGRRALLISGGIQ 306 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~g~l~-d~~~~~~~~~~~~~~ 306 (459)
.+.++.. .+.....+.. -....+.....++++.+++-.. .+..++..+.-.+...... .++.+|+.+..+++.
T Consensus 264 ~~vc~~~-~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~ 342 (488)
T KOG2325|consen 264 VLVCIFL-RFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLI 342 (488)
T ss_pred HHHHHHH-HHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHH
Confidence 2233333 3323333333 3334444455578776654332 3333333332222222222 233445555444333
Q ss_pred HHHHHHHHHHHHhhccCC--------Cccccchhhh---------H--HHHHHHHHHHHHhhcccccccccccccCChhh
Q 012626 307 MITCQVIVSIILGLKFGP--------NQELSKSFSI---------L--VVVVICLFVLAFGWSWGPLGWTVPSEIFPLET 367 (459)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 367 (459)
...+..+..........+ .........| . .+....+++..+-....+. .+.-+|...|+.
T Consensus 343 ~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~-~tlySkiLgp~~ 421 (488)
T KOG2325|consen 343 FFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTAL-DTLYSKILGPRD 421 (488)
T ss_pred HHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchH-HHHHHHHhCCcc
Confidence 333322222111111101 0000111111 1 1111122222222222223 455678999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhhee
Q 012626 368 RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYF 418 (459)
Q Consensus 368 ~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 418 (459)
+++..|+....+..+..++|.+........|+...+.+.....++....+.
T Consensus 422 q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~ 472 (488)
T KOG2325|consen 422 QGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWI 472 (488)
T ss_pred ccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888988777777766665555443
No 118
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.73 E-value=1.6e-16 Score=151.60 Aligned_cols=380 Identities=13% Similarity=0.094 Sum_probs=251.9
Q ss_pred HHHhhhhhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH--
Q 012626 4 FLKKFFHDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA-- 81 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-- 81 (459)
+.+.... .|.+.....+++.++++.++.|++.+.+=++..+...+..+..-|.-|-+.+-+|+++++++++++++-+
T Consensus 107 ~~q~l~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~ 185 (735)
T KOG3626|consen 107 FAQGLYV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFF 185 (735)
T ss_pred HHHHhhh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHh
Confidence 3344443 5666677788999999999999999999999999999999999999999999999999999999986530
Q ss_pred ---------h----------------------------------------H-HHHHHHHHHHhhcccccchhhhHHHHhc
Q 012626 82 ---------N----------------------------------------L-AMLLTGRILLGVGIGFGNQAVPLYLSEM 111 (459)
Q Consensus 82 ---------~----------------------------------------~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 111 (459)
+ + ..++++.++.|+|....++...+|+-|.
T Consensus 186 ~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDn 265 (735)
T KOG3626|consen 186 SGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDN 265 (735)
T ss_pred cCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccc
Confidence 0 1 2677889999999999999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc----c--c-------c----chhHHHHHhhhHHHHHHHHHHhccCCC
Q 012626 112 APTHLRGGLNMMFQLATTLGIFTANMINYGTQK----L--E-------T----WGWRLSLGLAAAPALMMTVGGILLPET 174 (459)
Q Consensus 112 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~----~--~-------~----~gwr~~f~~~~~~~~~~~~~~~~~~e~ 174 (459)
..+++-+..+|+......+|.++|-+++..... . . + ..|..-|++.+.+.++..+.++++|.+
T Consensus 266 vk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~ 345 (735)
T KOG3626|consen 266 VKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKE 345 (735)
T ss_pred ccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999998887543221 1 0 0 137777888888888888888888765
Q ss_pred hHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHh
Q 012626 175 PNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFY 254 (459)
Q Consensus 175 p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (459)
.+. .++..++ ++.+.....+...++.....+.-++.....+++++ .++++...+...+....+..+.+|
T Consensus 346 lp~---~~~~~~~----~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~----N~if~~~~l~~~~~~~~~~G~~tF 414 (735)
T KOG3626|consen 346 LPK---SQKRKRA----RDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLS----NPIFMLVVLASVIESLAITGYITF 414 (735)
T ss_pred Ccc---ccccchh----hhhcccccccccccCCcchhhhHHHHHHHHHHHhc----CchHHHHHHHHHHHHHHHhhHHHh
Confidence 421 1110000 00000000000000000000000011122333333 345777777778888888999999
Q ss_pred HHHHHHh-cCCCCchhHHHHHHHHHH-HHHHHHHHHHHHHhhCC--chhhhhhhHHHHHHHHHHHHHHhhc---------
Q 012626 255 APVLFQS-MGFKGDASLYSSAMTGAV-LASSTLISIATVDKLGR--RALLISGGIQMITCQVIVSIILGLK--------- 321 (459)
Q Consensus 255 ~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--------- 321 (459)
.|.|+++ +|.+...+..+.....+. ..+|.+++|++..|+.. |....+..+...+..+.........
T Consensus 415 lPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~ 494 (735)
T KOG3626|consen 415 LPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGV 494 (735)
T ss_pred hHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccce
Confidence 9999986 999999988888666654 46788899999998754 4444444444444433322211111
Q ss_pred -------------------------------------------------------c------------CC-----Cc---
Q 012626 322 -------------------------------------------------------F------------GP-----NQ--- 326 (459)
Q Consensus 322 -------------------------------------------------------~------------~~-----~~--- 326 (459)
. .+ +.
T Consensus 495 ~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~ 574 (735)
T KOG3626|consen 495 TNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAK 574 (735)
T ss_pred ecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceee
Confidence 0 00 00
Q ss_pred ----ccc-chhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHH-HHHHHHHHHHHHHHhh
Q 012626 327 ----ELS-KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL-FFTFVIAQIFLTLLCS 396 (459)
Q Consensus 327 ----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~~~~~~~ 396 (459)
+.+ .......++..++..+..+.+..|. +.++-..+|++.|+.++|+..++.+ +|.+-+|.++|++.|.
T Consensus 575 ~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~-~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 575 KGYCPNDCCRQFLIFLALFAIGSFIGALGAVPG-MLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHHhccCcc-eEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 000 1112223333333444444444444 4566688999999999999988754 7778899999999985
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.70 E-value=1.1e-16 Score=154.17 Aligned_cols=174 Identities=16% Similarity=0.174 Sum_probs=132.2
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHH-H--HHHHhHHHHHHHHHHHhhcc
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAAL-N--AAAANLAMLLTGRILLGVGI 97 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~~r~l~G~~~ 97 (459)
+++++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+. . ..+++...++++|++.|++.
T Consensus 277 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 356 (490)
T PRK10642 277 LSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVIL 356 (490)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 34556888888888888889999999999999999999999988877654443332 2 22345777888999999887
Q ss_pred cccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHhhhHHHHHHHHHHhccCCChH
Q 012626 98 GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGILLPETPN 176 (459)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~-~gwr~~f~~~~~~~~~~~~~~~~~~e~p~ 176 (459)
+........++.|.+|++.|+.+++.......++..++|.+. ....+. .+|+.++++..+++++..+..+++||+|+
T Consensus 357 ~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~--g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 357 NCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLA--AWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred HHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccC
Confidence 777777788899999999999999974444445556677663 332222 35788877777777777777777899999
Q ss_pred HHHhh-----CcHHHHHHHHHHHhC
Q 012626 177 SLIER-----GKKVEGRRVLEKIRG 196 (459)
Q Consensus 177 ~l~~~-----~~~~~~~~~~~~~~~ 196 (459)
|+.++ ++.+|+++.++++++
T Consensus 435 ~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 435 RPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred CCCCCccccccchhhHHHHhhcccc
Confidence 98765 888999999988874
No 120
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.68 E-value=3.8e-18 Score=162.85 Aligned_cols=379 Identities=13% Similarity=0.117 Sum_probs=3.0
Q ss_pred hhhhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH--------
Q 012626 10 HDVYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA-------- 81 (459)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~-------- 81 (459)
...|.......+|+.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++++++++++++-+
T Consensus 18 ~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~ 97 (539)
T PF03137_consen 18 VSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSY 97 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcc
Confidence 345666777889999999999999999999999999999999999998888889999999999998875420
Q ss_pred ------------------------------------------hHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchH
Q 012626 82 ------------------------------------------NLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGG 119 (459)
Q Consensus 82 ------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 119 (459)
-+..++++.++.|+|....++...+|+-|..++++-+.
T Consensus 98 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~spl 177 (539)
T PF03137_consen 98 EEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPL 177 (539)
T ss_dssp ------------------------------------------------------SSS-----------------------
T ss_pred ccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCcc
Confidence 03578889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcc-------c---------cc----hhHHHHHhhhHHHHHHHHHHhccCCChHHHH
Q 012626 120 LNMMFQLATTLGIFTANMINYGTQKL-------E---------TW----GWRLSLGLAAAPALMMTVGGILLPETPNSLI 179 (459)
Q Consensus 120 ~~~~~~~~~~~G~~~g~~~~~~~~~~-------~---------~~----gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~ 179 (459)
.+|+......+|.++|-+++...... + +. .|-.-|++.+++.++..+..+++|+..+...
T Consensus 178 YiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~ 257 (539)
T PF03137_consen 178 YIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTS 257 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcc
Confidence 99999999999999888775322211 0 01 2656666677766666666666765431110
Q ss_pred hhCcHHHHHHHHHHHhCCCcccHHHHHHHHH---HHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHH
Q 012626 180 ERGKKVEGRRVLEKIRGTKEVNAEYQDMVDA---SELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAP 256 (459)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (459)
+..++.+...++..+.+ .++..+.++. .+..+......+.++ ..+.++...+...........+.++.|
T Consensus 258 --~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~df~~~l~~Ll----~Np~f~~~~la~~~~~~~~~G~~tF~p 329 (539)
T PF03137_consen 258 --ERQEEKESSERKEEDSD--KDSFKDPKSKKSFGKSIKDFPKALKRLL----TNPVFMCLILAGVFESFIVSGFATFLP 329 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --cccchhhhhhcchhhhh--hhcccccccccchhhhhhhHHHHHHHHh----cChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000000000 0000000000 000111112223333 344577777777777778888999999
Q ss_pred HHHHh-cCCCCchhHHHHHHHHH-HHHHHHHHHHHHHHhhC--CchhhhhhhHHHHHHHHHHHHHHhhc-----------
Q 012626 257 VLFQS-MGFKGDASLYSSAMTGA-VLASSTLISIATVDKLG--RRALLISGGIQMITCQVIVSIILGLK----------- 321 (459)
Q Consensus 257 ~~~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 321 (459)
.|++. ++.++.++..+.....+ +.++|.+++|++.+|++ .|+.+....+...+..+.........
T Consensus 330 KylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~ 409 (539)
T PF03137_consen 330 KYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTV 409 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecC
Confidence 99886 99999888887766555 56788899999999974 34444444444444333311111110
Q ss_pred -cC------C--------------------Cccccc---hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhh
Q 012626 322 -FG------P--------------------NQELSK---SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAG 371 (459)
Q Consensus 322 -~~------~--------------------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 371 (459)
+. . .+.-+. ......++..++..+..+....|.. ...-..+|+++|+.+
T Consensus 410 ~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~-~i~LR~V~~~~rs~A 488 (539)
T PF03137_consen 410 PYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPST-LITLRCVPPEQRSFA 488 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchh-eeeeccCChhhcchh
Confidence 00 0 000000 1112222333333344444445543 444588899999999
Q ss_pred hHHHHHHHH-HHHHHHHHHHHHHHhhc
Q 012626 372 QSITVAVNL-FFTFVIAQIFLTLLCSF 397 (459)
Q Consensus 372 ~g~~~~~~~-~g~~~~~~~~~~~~~~~ 397 (459)
.|+...+.+ +|.+-+|.++|.+.|+.
T Consensus 489 lGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 489 LGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ---------------------------
T ss_pred hhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 999997754 67789999999999875
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.68 E-value=1.8e-15 Score=140.80 Aligned_cols=318 Identities=13% Similarity=0.127 Sum_probs=205.5
Q ss_pred hHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcc--cccchhhhHHHHhccCCC
Q 012626 38 SLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGI--GFGNQAVPLYLSEMAPTH 115 (459)
Q Consensus 38 ~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~--~~~~~~~~~~i~~~~~~~ 115 (459)
...+...+.++..|.++||+|||..+.+..+...+......+.. |++++ +.|+.. +.......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchh
Confidence 33567788899999999999999999999998888888776665 33333 444432 445677889999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCChHHHHhhCcHHHHHHHHHHH
Q 012626 116 LRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETPNSLIERGKKVEGRRVLEKI 194 (459)
Q Consensus 116 ~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~p~~l~~~~~~~~~~~~~~~~ 194 (459)
+|....++....+..+..++|.+ +.......|.-.+|++..+..++..+.. .++||+..... +.+
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~--~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~---~~~--------- 210 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPAL--GGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKE---RSD--------- 210 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH--HHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccc---ccc---------
Confidence 99999999999999999999999 5555555677788888888888776655 55888752110 000
Q ss_pred hCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHH-hcCCCCchhHHHH
Q 012626 195 RGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSS 273 (459)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~ 273 (459)
........ .........+.++...+....|..+.......+..........-..+++++ .++++..+.+.+.
T Consensus 211 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~ 283 (463)
T KOG2816|consen 211 ATLRELTP-------GSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLL 283 (463)
T ss_pred ccccccCC-------CcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHH
Confidence 00000000 000000011122222221112222222222222111111111101123333 3899999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhccc
Q 012626 274 AMTGAVLASSTLISI-ATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWG 352 (459)
Q Consensus 274 ~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (459)
+..+....++.++.. .+...++.|+....+.....+......+.. ..|... ....... ++....
T Consensus 284 ~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~-------------~~w~~~-~~~v~~~-~~~~~~ 348 (463)
T KOG2816|consen 284 SLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT-------------ETWMMF-AAGVVVA-LAGIVF 348 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc-------------cchhhh-HHHHHHH-hhcchh
Confidence 999999999888777 677778888888888887777777777652 122222 2222222 222334
Q ss_pred ccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 353 PLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 353 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 396 (459)
|...+..+...+++.+|++.++...+..+.+.++|.+.+.+...
T Consensus 349 pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 349 PAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred HHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 44467778888999999999999999999999999999987654
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.65 E-value=1e-15 Score=121.38 Aligned_cols=137 Identities=25% Similarity=0.377 Sum_probs=120.4
Q ss_pred HHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHHhccCC
Q 012626 35 FTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPT 114 (459)
Q Consensus 35 ~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 114 (459)
+.+.+.++..+++++.|++.||+|||+.+..+..+..++.+.....++++.+.+.+++.|++.+...+...+++.|.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 34566788899999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc-cCC
Q 012626 115 HLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPE 173 (459)
Q Consensus 115 ~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~-~~e 173 (459)
++|++..++......+|..+++.+ .....+..+|++.+++.++..++..+..++ .||
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPL--GGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHh--HHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999998 445556678999999988887776655544 455
No 123
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.59 E-value=1.7e-14 Score=135.46 Aligned_cols=382 Identities=13% Similarity=0.141 Sum_probs=222.5
Q ss_pred hcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc-----cchhHHHHHHHHHHHHHHHHHHH----HhHHHH
Q 012626 16 KKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-----GRRASIICGGISFLLGAALNAAA----ANLAML 86 (459)
Q Consensus 16 ~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~~~~~~~~~~~~~~~~~~~----~~~~~l 86 (459)
...+..++++|+++++...+.+...+...+- ++.|.++|-+ .||+-++++.++..++.+..+.. .+....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIK-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHh-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 3444567889999999999988888877654 7889999975 35666777777776666655553 346677
Q ss_pred HHHHHHHhhcccccchhhhHHHHhccC--CCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHH
Q 012626 87 LTGRILLGVGIGFGNQAVPLYLSEMAP--THLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMM 164 (459)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~ 164 (459)
.+.-++..+|.+....++.+++.|... +++|+...+.......+|.+++..+ .+...+..++|..|.+.+++..+.
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l--~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLL--SGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh--hhhhhhcCCCeEEehHHHHHHHHH
Confidence 777788899999999999999999984 3447788888888899999999888 555666678999999988877776
Q ss_pred HHHHhcc-CCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHH-HHHHHHH
Q 012626 165 TVGGILL-PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVM-AIFMPMF 242 (459)
Q Consensus 165 ~~~~~~~-~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 242 (459)
.+..+++ +|.++ .+.++... ..++ ..+..... .++.....++.++.+....... ..++...
T Consensus 168 ~~~~~~~~~e~~~-----~~~~~~~~----~~~~-~~~~~~~~-------~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 230 (433)
T PF03092_consen 168 LIVALFLLEERKV-----RPADEVFS----FGKE-EVPCLFGS-------FREQLSELWRALQQRAIWQPILFFIFFFNL 230 (433)
T ss_pred HHHHHHhhhhccc-----cccchhhc----cccc-ccchhhHH-------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 6555554 44210 00000000 0000 00000000 0000111222332222111111 1111111
Q ss_pred hhhcchHHHHHhHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHh
Q 012626 243 QILTGINSILFYAPVLFQSMG---FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (459)
..........++.. +..+ +++...+....+..++.++|..+..+...+..-|+++....+...+..+.-... .
T Consensus 231 ~~~~~~a~~fy~~~---~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~l-v 306 (433)
T PF03092_consen 231 PPSISSASSFYFQT---DALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLL-V 306 (433)
T ss_pred ccCCCCccEEEEEe---ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEE-E
Confidence 11111010111111 1234 777777877777778888888877776666666766655544333222211111 0
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK- 398 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~- 398 (459)
...+..-..++. +..+.-..+........+-|. ..+++|+.|+...|+.+++...+.++|..++..+...+.+..+
T Consensus 307 ~~~n~~~Gi~d~--~f~lgd~~l~~~~~~i~~mP~-lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~v 383 (433)
T PF03092_consen 307 TRWNLDLGIPDQ--WFALGDTILEEVIGMIAFMPS-LVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGV 383 (433)
T ss_pred EEEeeeeCcCCe--EEEEEhHHHHHHHHHHHHHHH-HHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 011100011111 222223344444444455555 3667899999999999999999999999999999988877655
Q ss_pred -------chhHHHHHHHHHHHHHhheeeccCCC
Q 012626 399 -------FGIFLFFAGWVTIMTIFVYFFLPETK 424 (459)
Q Consensus 399 -------~~~~~~~~~~~~l~~~~~~~~~~~~~ 424 (459)
.....++..++.++.+.+..++|+.+
T Consensus 384 t~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~ 416 (433)
T PF03092_consen 384 TRDDFSNLWLLILICSVIQLLPLPLLFLLPPQK 416 (433)
T ss_pred CcccccchHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 12333333444445555555566543
No 124
>TIGR00895 2A0115 benzoate transport.
Probab=99.53 E-value=1.1e-13 Score=130.35 Aligned_cols=175 Identities=16% Similarity=0.155 Sum_probs=127.1
Q ss_pred HHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHH
Q 012626 235 MAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 314 (459)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 314 (459)
....+..+...........+.|.+.+++|.+..+.++......++.+++.++.|++.||+|||+.+..+.....++.++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 99 (398)
T TIGR00895 20 ILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLC 99 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 33333344343444556667888888899999999999999999999999999999999999999988887777666555
Q ss_pred HHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 315 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
... ++.+.......+.+.+.+.. .+...+++.|.+|++.|+++.++......+|..+++.+.+.+.
T Consensus 100 ~~~-------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 165 (398)
T TIGR00895 100 ALA-------------TNVTQLLILRFLAGLGLGGL-MPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLI 165 (398)
T ss_pred HHc-------------cchHHHHHHHHHHhcccccc-hhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 432 12233333444444444433 3444688899999999999999999999999999999999999
Q ss_pred hhccchhHHHHHH-HHHHHHHhheeeccCC
Q 012626 395 CSFKFGIFLFFAG-WVTIMTIFVYFFLPET 423 (459)
Q Consensus 395 ~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~ 423 (459)
+..+|...+.+.+ +..+...+.....|++
T Consensus 166 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 166 PVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred hcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 8888766665553 4444444444555654
No 125
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.53 E-value=1.4e-12 Score=117.76 Aligned_cols=353 Identities=11% Similarity=0.035 Sum_probs=217.4
Q ss_pred cCCCCCC-ccccCchhHH-HHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 012626 17 KHAHENN-YCKYDNQGLA-AFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLG 94 (459)
Q Consensus 17 ~~~~~~~-~~~~s~~~~~-~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (459)
..+.+.+ +.|++..|+. -+.-...-.+....++...+.|..|.|++++++.+...+...+..+.++...+-+..++.|
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg 105 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYG 105 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 3334444 3788888876 5666667778888999999999999999999999999999999999999999999999999
Q ss_pred hcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCC
Q 012626 95 VGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPET 174 (459)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~ 174 (459)
++.+. ..+-++++--..|+++-.++.+...+..-+|..++.+++-.....+..+.+..+++......+.++..+++|..
T Consensus 106 ~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 106 LATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99776 57888999999999999999999999999998888888655555555678888888777777777777888876
Q ss_pred hHHHHhhCcHHHHHHHHHHHhCC--CcccHHHHHH-HHHHHhhcccCCchHHHh---cccchhHHHHHHHHHHHhhhcch
Q 012626 175 PNSLIERGKKVEGRRVLEKIRGT--KEVNAEYQDM-VDASELANSIKHPFRNIL---ERRNRPQLVMAIFMPMFQILTGI 248 (459)
Q Consensus 175 p~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 248 (459)
++...-+++.++... .++.+.+ ++.++...+. ++........+..++.++ +.-...+.++...+.+....+++
T Consensus 185 ~~S~~f~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy 263 (412)
T PF01770_consen 185 KRSLFFHRKPPAEQD-ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGY 263 (412)
T ss_pred CcccceeccCccccc-cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHH
Confidence 653332222211110 0000000 0000000000 000000000011111121 11222333555566666667777
Q ss_pred HHHHHhHHHHHHhc---CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 249 NSILFYAPVLFQSM---GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 249 ~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
..+..|...+.++. +-+..-.|..-....+.+.++.+..|++..++.+...+..+......+..++....
T Consensus 264 ~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~------- 336 (412)
T PF01770_consen 264 YQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSF------- 336 (412)
T ss_pred HHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 77778877777665 33334456777777778888888888885555554444444333332332222221
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT 383 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 383 (459)
.++.|......+++...+....... ..-++.....+.-+...|+..++..+-.
T Consensus 337 ----t~~Iwv~Y~~yIif~~~y~fliTiA-~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 337 ----TGNIWVCYAGYIIFRSLYMFLITIA-SFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 1344555555555555555433322 2333444455666777776666554443
No 126
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.52 E-value=1.4e-12 Score=114.45 Aligned_cols=237 Identities=13% Similarity=0.121 Sum_probs=154.7
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccch
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQ 102 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 102 (459)
+++|+++.|++.+....+...++..++.|.++||+|||+..+..+++++++++. -..++++.++++|++.|++.+..+.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHH
Confidence 357999999999999999999999999999999999999999999999999964 4678999999999999999999988
Q ss_pred hhhHHH-Hhcc----CCCcchHHHHHHH-HHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc-cCCCh
Q 012626 103 AVPLYL-SEMA----PTHLRGGLNMMFQ-LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPETP 175 (459)
Q Consensus 103 ~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~-~~e~p 175 (459)
+-.++. .|.- |++..+..++... ...++-.+.+.+++.........|-..+|....+..++..++... .+|++
T Consensus 141 ~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 141 AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 887765 3442 2222333333333 222333344444432222222234578888887777776655543 56654
Q ss_pred HHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhH
Q 012626 176 NSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYA 255 (459)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (459)
..- .+..+. .+..++.++.+.++ ++++.............+..+..|.
T Consensus 221 g~~---~~~~~~--------------------------~~~~~~a~~~i~~d---~ril~LG~~qslFE~smy~FVflWt 268 (354)
T PF05631_consen 221 GDT---SSSSSL--------------------------SGSFREAWRAILSD---PRILLLGLIQSLFEGSMYLFVFLWT 268 (354)
T ss_pred CCc---ccccch--------------------------HHHHHHHHHHHHcC---chhHHHHHHHHHHHHHHHHheeeee
Confidence 100 000000 00001122333332 3455556666666676677777788
Q ss_pred HHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 256 PVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL 294 (459)
Q Consensus 256 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 294 (459)
|.+-.+ -.....|+++....++.++|+.+..++..+-
T Consensus 269 PaL~~~--~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 269 PALDPD--DEELPLGLIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred ceecCC--CCCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 876521 1233568899999999999998887665543
No 127
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.51 E-value=8.2e-14 Score=123.51 Aligned_cols=182 Identities=15% Similarity=0.169 Sum_probs=148.5
Q ss_pred hhHHHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHH
Q 012626 230 RPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMIT 309 (459)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 309 (459)
+.++++..++........--.+..-.|.+.++.++|..+.+.+.+...+...++.++.|.++||.+.|..+..+++..++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai 106 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHH
Confidence 33445555555555555555677778889888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHH
Q 012626 310 CQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQI 389 (459)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 389 (459)
..+++.+. ++.+...++..+-+.+.+.+++|.. ..+..-+|+++||+..++.++..++|+.+.|++
T Consensus 107 ~nil~Gfs-------------~s~~~~~~l~~lng~fQg~Gwpp~~-~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~ 172 (448)
T COG2271 107 VNILFGFS-------------PSLFLFAVLWVLNGWFQGMGWPPCA-RTITHWFSRKERGTWWSIWNTSHNIGGALAPLV 172 (448)
T ss_pred HHHHHhhh-------------hHHHHHHHHHHHHHHHhcCCCcHHH-HHHHHHcCccccCceEEEehhhhhcccchHHHH
Confidence 99988875 3456667777788889999998885 556799999999999999999999999999999
Q ss_pred H--HHHHhhccchhHHHHHHHHH-HHHHhheeeccCCCC
Q 012626 390 F--LTLLCSFKFGIFLFFAGWVT-IMTIFVYFFLPETKG 425 (459)
Q Consensus 390 ~--~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~ 425 (459)
. +.+.++.+|...+++.+++. ++++++++..+++.+
T Consensus 173 ~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 173 ALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 9 88888888877776666554 555556666665543
No 128
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.51 E-value=8.5e-13 Score=124.74 Aligned_cols=179 Identities=11% Similarity=0.090 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHH
Q 012626 232 QLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQ 311 (459)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 311 (459)
+.+....+..+.............|.+.+++|.+..+.++..+...++..++.++.|++.||+|||+.+..+.....++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 91 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGT 91 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 34445555555555566666777788888899999999999999999999999999999999999999998877777766
Q ss_pred HHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 012626 312 VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFL 391 (459)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~ 391 (459)
+..... ++.+..+....+.+.+.+... +....++.|.+|+++|+.+.++.+....+|..+++.+.+
T Consensus 92 ~~~~~~-------------~~~~~l~~~~~l~G~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 157 (405)
T TIGR00891 92 LACGFA-------------PGYITMFIARLVIGIGMGGEY-GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYS 157 (405)
T ss_pred HHHHHh-------------ccHHHHHHHHHHHHhhhhhhh-HHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 655443 123333444444555544333 334577789999999999999999999999999999999
Q ss_pred HHHhhcc--chhHHHHHHHHHHHHHhheeeccCCC
Q 012626 392 TLLCSFK--FGIFLFFAGWVTIMTIFVYFFLPETK 424 (459)
Q Consensus 392 ~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~ 424 (459)
.+.+..+ |...+...++..++.++.....||++
T Consensus 158 ~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 158 LVVPVWGDGWRALFFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 8887765 66666665555555555545556543
No 129
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.51 E-value=1.6e-12 Score=122.63 Aligned_cols=180 Identities=11% Similarity=0.073 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHH
Q 012626 232 QLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQ 311 (459)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 311 (459)
.......+.+..............|.+.+++|++..+.++..+...++..++.+..|++.||+|||+.+..+..+..++.
T Consensus 8 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 87 (412)
T TIGR02332 8 RLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIAS 87 (412)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 34445555555555556667777787778899999999999999999999999999999999999999988888877777
Q ss_pred HHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 012626 312 VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFL 391 (459)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~ 391 (459)
++..+. ++.+.....-++.+.+.+.. .+....++.|.+|+++|+++.++.+....+|..+++.+.+
T Consensus 88 ~~~~~~-------------~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T TIGR02332 88 TATMFA-------------TGPESLYLLRILVGIAEAGF-LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSG 153 (412)
T ss_pred HHHHHh-------------cCHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766553 22333344444455555433 3444567789999999999999999999999999999999
Q ss_pred HHHh------hccchhHHHHHHHHH-HHHHhheeeccCCCC
Q 012626 392 TLLC------SFKFGIFLFFAGWVT-IMTIFVYFFLPETKG 425 (459)
Q Consensus 392 ~~~~------~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~ 425 (459)
.+.+ ..+|...+.+.++.. +...+.++++||+++
T Consensus 154 ~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 154 YILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 8874 247777766655444 344455566777653
No 130
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.49 E-value=5.5e-13 Score=126.74 Aligned_cols=176 Identities=13% Similarity=0.161 Sum_probs=128.1
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 313 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 313 (459)
....++..+...........+.|.+.+++|++..+.++..+...++..++.++.|++.||+|||+.+.++.....++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~ 104 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINIL 104 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHH
Confidence 33344444444444445667788888899999999999999999999999999999999999999998888887777765
Q ss_pred HHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 012626 314 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 393 (459)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 393 (459)
.... ++.+.......+.+.+.+.... ....++.|.+|+++|++++|+.+....+|..+++.+.+.+
T Consensus 105 ~~~~-------------~~~~~l~~~~~l~g~~~g~~~~-~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 170 (434)
T PRK11663 105 FGFS-------------SSLWAFALLWVLNAFFQGWGWP-VCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI 170 (434)
T ss_pred HHHH-------------hHHHHHHHHHHHHHHHHHccch-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5543 1222333333344444444433 3357788999999999999999999999999999999999
Q ss_pred HhhccchhHHHHHHHHHH-HHHhheeeccCC
Q 012626 394 LCSFKFGIFLFFAGWVTI-MTIFVYFFLPET 423 (459)
Q Consensus 394 ~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~ 423 (459)
.+..+|...+...++..+ ..++..+.++|+
T Consensus 171 ~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 171 ALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 998888777766554433 333333444543
No 131
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.49 E-value=7e-13 Score=124.83 Aligned_cols=162 Identities=15% Similarity=0.118 Sum_probs=123.8
Q ss_pred HHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc
Q 012626 249 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 328 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (459)
..+....|.+.+++|.+..+.++......++..++.++.|++.||+|||+.+..+.....++.......
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~----------- 79 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA----------- 79 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-----------
Confidence 445556677777899999999999999999999999999999999999999988887777776665543
Q ss_pred cchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 012626 329 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGW 408 (459)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (459)
.+.+.......+.+.+.+.. .+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..+|...+...++
T Consensus 80 --~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 156 (399)
T TIGR00893 80 --GAYVSLYILRVLLGAAEAPF-FPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGV 156 (399)
T ss_pred --cCHHHHHHHHHHHHHHHHhh-hhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 22344444445555555543 344467889999999999999999999999999999999999888888776666555
Q ss_pred HHHH-HHhheeeccCCC
Q 012626 409 VTIM-TIFVYFFLPETK 424 (459)
Q Consensus 409 ~~l~-~~~~~~~~~~~~ 424 (459)
..++ .++..+..++++
T Consensus 157 ~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 157 LGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHHHHHhhheecCCC
Confidence 4443 333444455543
No 132
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.49 E-value=4.6e-13 Score=125.62 Aligned_cols=150 Identities=14% Similarity=0.137 Sum_probs=125.1
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccc
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFG 100 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 100 (459)
.++++|+++.+.+++.+...++..++.++.|+++||+|||+.+..+.....+........++.+.+++.+++.+++.+..
T Consensus 243 l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~ 322 (393)
T PRK15011 243 IINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGIL 322 (393)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 45667899999999988888888889999999999999999888877766666555556778888888999998888877
Q ss_pred chhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCC
Q 012626 101 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 173 (459)
Q Consensus 101 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e 173 (459)
.+....+..|..|+ +|++++++++...++|..+++.+ .+...+..||+..|++.+++.++..+..+++||
T Consensus 323 ~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l--~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 323 GGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSL--AGIVAEIWNYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHH--HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 77778888999975 58999999999999999999999 555566679999999988888887777777765
No 133
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.48 E-value=2.2e-13 Score=129.06 Aligned_cols=148 Identities=14% Similarity=0.154 Sum_probs=126.0
Q ss_pred ccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhh
Q 012626 26 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 105 (459)
Q Consensus 26 ~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 105 (459)
+.+..+.|++.+...++..++.+++|+++||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+...
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677889999999999999999999999999999999999999999988988999999999999999999888878888
Q ss_pred HHHHhccCCCcchHHHHH-HHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH-hccCCCh
Q 012626 106 LYLSEMAPTHLRGGLNMM-FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG-ILLPETP 175 (459)
Q Consensus 106 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~-~~~~e~p 175 (459)
.++.|.+|++.|+...+. ++....+|.++++++ .+...+..|||..|.+.+++.++..++. +.+++.|
T Consensus 338 ~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~--~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 338 KYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTL--AGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHcCccceeeeeeehHHHHHHHHHHHHHHH--HHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999887655 667788999999999 5666667799999999888776655444 3444443
No 134
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.47 E-value=2.1e-12 Score=127.62 Aligned_cols=161 Identities=14% Similarity=0.125 Sum_probs=122.7
Q ss_pred HHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc
Q 012626 249 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 328 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (459)
..+....|.+.+++|.+..+.+++.+...++.+++.+++|+++||+|||+.++++.++..++.++..+.
T Consensus 184 ~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa----------- 252 (742)
T TIGR01299 184 FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFV----------- 252 (742)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 345556777777899999999999999999999999999999999999999998887777766655543
Q ss_pred cchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc-----------
Q 012626 329 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF----------- 397 (459)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~----------- 397 (459)
++.+.+++.-++.+++.+... +...+++.|.+|++.|+...++...+..+|.++++.+...+....
T Consensus 253 --~s~~~llv~R~l~G~g~g~~~-p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~ 329 (742)
T TIGR01299 253 --QGYGFFLFCRLLSGFGIGGAI-PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQ 329 (742)
T ss_pred --hhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccc
Confidence 223344444555555555444 555789999999999999999999999999999998877666543
Q ss_pred --cchhHHHHHHHHHHHHHhheeeccCC
Q 012626 398 --KFGIFLFFAGWVTIMTIFVYFFLPET 423 (459)
Q Consensus 398 --~~~~~~~~~~~~~l~~~~~~~~~~~~ 423 (459)
+|...+.+.++..++.++..+++||.
T Consensus 330 ~~gWR~l~~i~~lp~ll~ll~~~~lPES 357 (742)
T TIGR01299 330 FHSWRVFVIVCAFPCVFAIGALTFMPES 357 (742)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34556666666666666666777876
No 135
>PRK10054 putative transporter; Provisional
Probab=99.47 E-value=2.5e-12 Score=120.57 Aligned_cols=164 Identities=10% Similarity=0.098 Sum_probs=117.6
Q ss_pred HHHHHHHhhhcchHHHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHH
Q 012626 236 AIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 314 (459)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 314 (459)
.+.+..++...+......+.|.+++ ++|++..+.++..+...+..+++++..|+++||+|||+.+..+.....++.+.+
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 3334444445555666666666654 589999999999999999999999999999999999999888887776666555
Q ss_pred HHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 315 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
.+. ++.+..+....+.+...+ ...+....+..|..|+++|+++.|+.+...++|..++|.+.+.+.
T Consensus 91 ~~~-------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 91 PLV-------------NNVTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHH-------------hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443 122223332333333333 334445677789999999999999999999999999999999887
Q ss_pred hhccchhHHHHHHHHHHHHH
Q 012626 395 CSFKFGIFLFFAGWVTIMTI 414 (459)
Q Consensus 395 ~~~~~~~~~~~~~~~~l~~~ 414 (459)
+ .++...+...+++.++.+
T Consensus 157 ~-~g~~~~f~~~~~~~~i~~ 175 (395)
T PRK10054 157 M-QSINLPFWLAAICSAFPL 175 (395)
T ss_pred H-hccCcHHHHHHHHHHHHH
Confidence 5 566666665555554443
No 136
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.47 E-value=4.2e-13 Score=126.50 Aligned_cols=148 Identities=13% Similarity=0.201 Sum_probs=122.2
Q ss_pred CchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH----hHHHHHHHHHHHhhcccccchh
Q 012626 28 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA----NLAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 28 s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~ 103 (459)
+.++.+...+...++..++.++.|+++||+|||+++..+.++.+++..+..... +++.+++.+++.|++.+...+.
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~ 328 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNIS 328 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 456779999999999999999999999999999999999999988877766632 3467788899999999988888
Q ss_pred hhHHHHhccCCCcchHHHHHHH-HHHHHHHHHHHHHhhhhhcccc----chhHHHHHhhhHHHHHHHHHH-hccCCCh
Q 012626 104 VPLYLSEMAPTHLRGGLNMMFQ-LATTLGIFTANMINYGTQKLET----WGWRLSLGLAAAPALMMTVGG-ILLPETP 175 (459)
Q Consensus 104 ~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~~~~~~~----~gwr~~f~~~~~~~~~~~~~~-~~~~e~p 175 (459)
...++.|++|+++|++++++.+ ...++|.++||+++........ .||+..|++.+++.++..++. ++++|+.
T Consensus 329 ~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 329 GSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 8999999999999999999997 6788999999999543332211 479999999888877776555 4467663
No 137
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.46 E-value=5.4e-13 Score=123.38 Aligned_cols=147 Identities=28% Similarity=0.361 Sum_probs=134.6
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchh-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccc
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRA-SIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 101 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 101 (459)
+.+|.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+.....++.+.+.+..++.|++.+...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 283 (352)
T cd06174 204 EVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAF 283 (352)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccc
Confidence 344889999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhcc
Q 012626 102 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL 171 (459)
Q Consensus 102 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (459)
+...+++.|..|+++|++.+++......+|..+++.+ .....+..+|+..+++.+++.++..+..+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i--~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 284 PALLTLASELAPPEARGTASGLFNTFGSLGGALGPLL--AGLLLDTGGYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred hhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhcccCcchHHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999999999999999 5555666789999999999988877665543
No 138
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.43 E-value=5.6e-12 Score=118.84 Aligned_cols=172 Identities=9% Similarity=0.134 Sum_probs=123.7
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-CCchhhhhhhHHHHHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQMITCQ 311 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~ 311 (459)
++..+.........++....+.|.++.+ +|++..+++...........++.+++|+++||+ |||+.+..+.....++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 3334444444555667777788888765 899999999999999999999999999999999 99999998888887776
Q ss_pred HHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChh--hhhhhhHHHHHHHHHHHHHHHHH
Q 012626 312 VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE--TRSAGQSITVAVNLFFTFVIAQI 389 (459)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~ 389 (459)
+++... ............+...+.+. ..+...++++|.+|++ .|.++.++.+...++|+.++|.+
T Consensus 91 lll~~~------------~~~~~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 91 VVLGAS------------EIHPSFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred HHHHHh------------hcchhHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 554321 01111122222222233332 2343357789999875 79999999999999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHhhee
Q 012626 390 FLTLLCSFKFGIFLFFAGWVTIMTIFVYF 418 (459)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 418 (459)
.+++.+..+|...+..+++..+++++.+.
T Consensus 158 ~g~L~~~~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 158 CGYAQEEYSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHHhhhChHHHHHHHHHHHHHHHHHHH
Confidence 99999988988777766665555555443
No 139
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.42 E-value=3.3e-12 Score=119.82 Aligned_cols=165 Identities=18% Similarity=0.180 Sum_probs=121.4
Q ss_pred cchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 246 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
..........|.+.+++|.++.+.++..+...++..++.++.|++.||+|||+.+..+.....++.+.....
T Consensus 19 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------- 90 (385)
T TIGR00710 19 LGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-------- 90 (385)
T ss_pred HHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH--------
Confidence 334445555677888899999999999999999999999999999999999999988887777766665543
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 405 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 405 (459)
++.+......++.+.+.+... +....++.|.+|+++|+++.++.+....++..+++.+.+.+.+..+|...+..
T Consensus 91 -----~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 164 (385)
T TIGR00710 91 -----NNIETLLVLRFVQAFGASAGS-VISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF 164 (385)
T ss_pred -----ccHHHHHHHHHHHHcchhHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 222333333444444444333 33457788999999999999999999999999999999999988888766555
Q ss_pred HHHHHH-HHHhheeeccCCC
Q 012626 406 AGWVTI-MTIFVYFFLPETK 424 (459)
Q Consensus 406 ~~~~~l-~~~~~~~~~~~~~ 424 (459)
.++..+ ..+...+..||++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 165 LSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCC
Confidence 444433 3333444455543
No 140
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.41 E-value=1.6e-12 Score=121.63 Aligned_cols=164 Identities=11% Similarity=0.114 Sum_probs=121.0
Q ss_pred chHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCc
Q 012626 247 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 326 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (459)
....+....|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.++....
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--------- 80 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS--------- 80 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh---------
Confidence 34555666788878899999999999999999999999999999999999999999888887777766554
Q ss_pred cccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHHH
Q 012626 327 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQ-IFLTLLCSFKFGIFLFF 405 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~ 405 (459)
.+.+..++...+.+.+.+.. .+...+++.|.+|+++|+++.++.+....+|..+++. +.+.+.+..++...+..
T Consensus 81 ----~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 155 (379)
T TIGR00881 81 ----TSLWVMAALWALNGIFQGMG-WPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIV 155 (379)
T ss_pred ----hhHHHHHHHHHHHHhhcccc-CCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHH
Confidence 12333344444444444433 4455678899999999999999999999999999994 55666666677665555
Q ss_pred HHHH-HHHHHhheeeccCCC
Q 012626 406 AGWV-TIMTIFVYFFLPETK 424 (459)
Q Consensus 406 ~~~~-~l~~~~~~~~~~~~~ 424 (459)
.+++ .+..++..+..++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 156 PGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHHHHHheeeCCCc
Confidence 4443 344455555555543
No 141
>PRK03545 putative arabinose transporter; Provisional
Probab=99.41 E-value=8.8e-12 Score=117.01 Aligned_cols=159 Identities=12% Similarity=0.070 Sum_probs=118.3
Q ss_pred HHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc
Q 012626 251 ILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 330 (459)
Q Consensus 251 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (459)
.....|.+.+++|.++.+.++..+...++..++.+..|++.||+|||+.+..+.....++.+.....
T Consensus 28 ~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------------- 94 (390)
T PRK03545 28 PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA------------- 94 (390)
T ss_pred HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 3345688888899999999999999999999999999999999999999999888877776665543
Q ss_pred hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 012626 331 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 410 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (459)
++.+..++.-.+.+.+.+ ...+....++.|.+|+++|+++.|+......++..++|.+.+.+.+..+|...+...++..
T Consensus 95 ~~~~~l~~~r~~~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~ 173 (390)
T PRK03545 95 WNFTVLLISRIGIAFAHA-IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGA 173 (390)
T ss_pred ccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHH
Confidence 223333333333343333 2334445777899999999999999999999999999999999988888877666655544
Q ss_pred HHH-HhheeeccCC
Q 012626 411 IMT-IFVYFFLPET 423 (459)
Q Consensus 411 l~~-~~~~~~~~~~ 423 (459)
+.. .......|+.
T Consensus 174 ~l~~~~~~~~~~~~ 187 (390)
T PRK03545 174 LITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHhCCCC
Confidence 433 3333334543
No 142
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.41 E-value=3e-12 Score=119.11 Aligned_cols=161 Identities=12% Similarity=0.091 Sum_probs=120.9
Q ss_pred chHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCc
Q 012626 247 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 326 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (459)
.........|.+..+.+.++.+.++..+...++..++.++.|+++||+|||+.+..+.....++..........
T Consensus 14 ~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~------ 87 (365)
T TIGR00900 14 GTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL------ 87 (365)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc------
Confidence 44555566677878889999999999999999999999999999999999999988877776666655543210
Q ss_pred cccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 012626 327 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFA 406 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (459)
...+.+.......+.+.+.+.. .+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+|...+...
T Consensus 88 --~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 88 --GGLNIWQVYVLAGILAIAQAFF-TPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred --CCCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 0012344444444445544433 3444688899999999999999999999999999999999999888887766665
Q ss_pred HHHHHHHHhh
Q 012626 407 GWVTIMTIFV 416 (459)
Q Consensus 407 ~~~~l~~~~~ 416 (459)
++..++..+.
T Consensus 165 ~~~~~~~~~~ 174 (365)
T TIGR00900 165 AVGFAISALL 174 (365)
T ss_pred HHHHHHHHHH
Confidence 5555444433
No 143
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.41 E-value=2.1e-12 Score=121.67 Aligned_cols=142 Identities=20% Similarity=0.117 Sum_probs=122.4
Q ss_pred hHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHHh
Q 012626 31 GLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSE 110 (459)
Q Consensus 31 ~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 110 (459)
+.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45666778888899999999999999999999999999888888888888888888899999999999888888888889
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCC
Q 012626 111 MAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPET 174 (459)
Q Consensus 111 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~ 174 (459)
..|+++|+++.++++....+|..+++++ .+...+..||++.|++.++..++..+..++++++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~--~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPL--AGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999998888 4555566789999999888888777666555443
No 144
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.41 E-value=9.3e-12 Score=118.45 Aligned_cols=163 Identities=10% Similarity=0.080 Sum_probs=121.8
Q ss_pred HHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHH
Q 012626 235 MAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 314 (459)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 314 (459)
....+..+.............|.+.+++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.....++.+..
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 100 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLS 100 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 33444444444444555666677777899999999999999999999999999999999999999999988888877766
Q ss_pred HHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 315 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
... ++.+...+.-.+.+.+.+... +....++.|.+|+++|+++.++......+|..+++.+.+.+.
T Consensus 101 ~~~-------------~~~~~l~~~r~l~G~g~g~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 101 GLA-------------SGVIMLTLSRFIVGMGMAGEY-ACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHH-------------hHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 554 223334444444454444333 334577789999999999999999999999999999998888
Q ss_pred hhccchhHHHHHHHHHH
Q 012626 395 CSFKFGIFLFFAGWVTI 411 (459)
Q Consensus 395 ~~~~~~~~~~~~~~~~l 411 (459)
+..+|...+.+.....+
T Consensus 167 ~~~~w~~~f~i~~~~~~ 183 (426)
T PRK12307 167 EAYGWRAAFFVGLLPVL 183 (426)
T ss_pred ccCCHHHHHHHHHHHHH
Confidence 88888776665544433
No 145
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.41 E-value=3.1e-12 Score=119.56 Aligned_cols=150 Identities=15% Similarity=0.159 Sum_probs=125.7
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccc
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFG 100 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 100 (459)
.++++|.++.+.+++.+.......++.++.|++.||+|||+.+..+.++..+......+.++.+.+.+.+++.|++.+..
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667889999999888887778888999999999999999998888777766666667788888888999999998888
Q ss_pred chhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCC
Q 012626 101 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 173 (459)
Q Consensus 101 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e 173 (459)
.+....++.|..|+ +++++.++++....+|..++|.+ .+...+..||+..|++.++..++..+...+++|
T Consensus 306 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 306 AGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSV--GGILAERWSYHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHH--HHHHHHhccchhHHHHHHHHHHHHHHHHheecC
Confidence 88888999999875 56799999999999999999999 555556678999999998888877776666543
No 146
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.40 E-value=1.6e-11 Score=115.03 Aligned_cols=149 Identities=15% Similarity=0.083 Sum_probs=116.6
Q ss_pred HHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcccc
Q 012626 250 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 329 (459)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (459)
......|.+.+++|+++.+.+...+...++..++.++.|++.||+|||+.+..+....+++.+.....
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~------------ 105 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA------------ 105 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH------------
Confidence 33345677778899999999999999999999999999999999999999999988888776665443
Q ss_pred chhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 012626 330 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 409 (459)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (459)
++.+..+..-.+.+.+.+.. .+....++.|.+|+++|+.+.++......++..++|.+.+.+.+..+|...+...++.
T Consensus 106 -~~~~~l~~~r~l~G~~~g~~-~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l 183 (394)
T PRK10213 106 -NSFSLLLIGRACLGLALGGF-WAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVM 183 (394)
T ss_pred -ChHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 22333444444555555443 3444677889999999999999999999999999999999999988887766665544
Q ss_pred HHH
Q 012626 410 TIM 412 (459)
Q Consensus 410 ~l~ 412 (459)
.++
T Consensus 184 ~~~ 186 (394)
T PRK10213 184 GVL 186 (394)
T ss_pred HHH
Confidence 443
No 147
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.40 E-value=1.9e-12 Score=120.98 Aligned_cols=141 Identities=13% Similarity=0.021 Sum_probs=121.5
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhH--HHHHHHHHHHhhccccc
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANL--AMLLTGRILLGVGIGFG 100 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~ 100 (459)
++++.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++..++.++..+.++. ..++...++.|++.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 312 (377)
T TIGR00890 233 QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGT 312 (377)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccc
Confidence 4578888899999999999999999999999999999999999999998888887776643 33556678889888888
Q ss_pred chhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHH
Q 012626 101 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMT 165 (459)
Q Consensus 101 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~ 165 (459)
.+....++.|.+|+++|+++.++......+|..++|.+ .+...+..||++.|++.+++.++..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~--~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 313 ISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLI--ASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred hhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHH--HHHHHhhhchhhHHHHHHHHHHHhc
Confidence 88888999999999999999999999999999999998 5555667789999999887766643
No 148
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=1.8e-11 Score=110.13 Aligned_cols=175 Identities=15% Similarity=0.155 Sum_probs=141.5
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHH
Q 012626 233 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV 312 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 312 (459)
.++.+.++.|..........-.+|.+.+++|.+..++|...+.+..+..++.++...+.||+.||++++....+..++.+
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~ 93 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNL 93 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Confidence 35556666777777778888889999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 012626 313 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLT 392 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 392 (459)
+..+. ++.+...+.=.+.+...+..+ ++...+..++.|+++|+++.++......+...++.++..+
T Consensus 94 l~alA-------------p~f~~Ll~aR~~~g~a~G~f~-~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 94 LSALA-------------PSFAVLLLARALAGLAHGVFW-SIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHh-------------ccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 88775 223334444445555555443 4456888999999999999999999999999999999999
Q ss_pred HHhhccchhHHHHHHHHHH-HHHhheeecc
Q 012626 393 LLCSFKFGIFLFFAGWVTI-MTIFVYFFLP 421 (459)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~ 421 (459)
+-|..||...+...+.+.+ ..+..+..+|
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999766665555544 4445556677
No 149
>PRK03699 putative transporter; Provisional
Probab=99.39 E-value=1.4e-11 Score=115.69 Aligned_cols=172 Identities=13% Similarity=0.067 Sum_probs=123.8
Q ss_pred chhHHHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHH
Q 012626 229 NRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMI 308 (459)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 308 (459)
++++..+...+..+.............|.+.+++|++..+.+...+...++..++.++.|++.||+|||+.+..+.....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 33444555555555554445566677888888899999999999999999999999999999999999999888877776
Q ss_pred HHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHH
Q 012626 309 TCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQ 388 (459)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 388 (459)
++.++.... ++.+.......+.+.+.+.... ....++.|.+|+++|+.+.+..+....+++.++|.
T Consensus 84 i~~~l~~~~-------------~~~~~~~~~~~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 149 (394)
T PRK03699 84 LAVAGLMFS-------------HSLALFSIAMFVLGVVSGITMS-IGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPI 149 (394)
T ss_pred HHHHHHHHc-------------chHHHHHHHHHHHHHhhHhhcc-chhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 666655442 2233333444444554444433 33567789999999999999988888899999999
Q ss_pred HHHHHHh-hccchhHHHHHHHHHHHHH
Q 012626 389 IFLTLLC-SFKFGIFLFFAGWVTIMTI 414 (459)
Q Consensus 389 ~~~~~~~-~~~~~~~~~~~~~~~l~~~ 414 (459)
+.+.+.+ ..+|...+...++..+...
T Consensus 150 ~~~~l~~~~~gw~~~f~~~~~~~~~~~ 176 (394)
T PRK03699 150 IAAYLLARSIEWYWVYACIGLVYVAIF 176 (394)
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 9888765 4577766665555444333
No 150
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.39 E-value=1.1e-11 Score=117.47 Aligned_cols=168 Identities=13% Similarity=0.026 Sum_probs=121.1
Q ss_pred chHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCc
Q 012626 247 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 326 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (459)
.........|.+.++.+.++.+.++......++..++.++.|+++||++||+.+..+....+++...+......
T Consensus 32 ~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~------ 105 (417)
T PRK10489 32 GLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL------ 105 (417)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc------
Confidence 44556667788888888889999999999999999999999999999999999888777666655544332110
Q ss_pred cccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 012626 327 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFA 406 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (459)
..++.+......++.+.+.+....+. ..++.|..|+++|+++.++.+....+|..++|.+.+.+.+..++...+.+.
T Consensus 106 --~~~~~~~l~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~ 182 (417)
T PRK10489 106 --PEPSLLAIYLLGLWDGFFGSLGVTAL-LAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLA 182 (417)
T ss_pred --CCCcHHHHHHHHHHHHHHHHHHHHHH-hhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHH
Confidence 01112233333333344434333333 567789999999999999999999999999999999999888877776666
Q ss_pred HHHHHHHHhheeeccCC
Q 012626 407 GWVTIMTIFVYFFLPET 423 (459)
Q Consensus 407 ~~~~l~~~~~~~~~~~~ 423 (459)
++..+...+..+.+|+.
T Consensus 183 ~~~~~~~~~~~~~l~~~ 199 (417)
T PRK10489 183 AAGTFITLLPLLRLPAL 199 (417)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 66666655555555553
No 151
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=1.9e-11 Score=117.90 Aligned_cols=164 Identities=12% Similarity=0.006 Sum_probs=123.4
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 313 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 313 (459)
++...+..+........+..+.|.+.+++|.++.+.++......++..++.++.|+++||+|||+.+..+.....++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 91 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLF 91 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 44455555555556667778899999999999999999988889999999999999999999999988877666665554
Q ss_pred HHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 012626 314 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 393 (459)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 393 (459)
.... ++.+..+....+.+.+.+.. .+....++.|.+|+++|+++.|+.+....++..++|.+.+.+
T Consensus 92 ~~~~-------------~~~~~l~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 92 CALS-------------GTLNELLLARVLQGVGGAMM-VPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHh-------------CCHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 4332 22333344444445544433 344467778999999999999999999999999999999999
Q ss_pred HhhccchhHHHHHHHHHH
Q 012626 394 LCSFKFGIFLFFAGWVTI 411 (459)
Q Consensus 394 ~~~~~~~~~~~~~~~~~l 411 (459)
.++.+|...+.+.....+
T Consensus 158 ~~~~gw~~~f~~~~~~~~ 175 (471)
T PRK10504 158 VEYASWHWIFLINIPVGI 175 (471)
T ss_pred HhhccHHHHHHHHHHHHH
Confidence 998888766665544433
No 152
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.38 E-value=1e-11 Score=117.28 Aligned_cols=170 Identities=15% Similarity=0.084 Sum_probs=122.2
Q ss_pred HHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHh
Q 012626 240 PMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (459)
..+.............|.+.+++|.++.+.++..+...++..++.++.|++.||+|||+.+..+.....++.+.....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-- 100 (406)
T PRK11551 23 VALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA-- 100 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh--
Confidence 333333344555666788888899999999999999999999999999999999999999998877766665544432
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKF 399 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~ 399 (459)
.+.+..++..++.+.+.+... +....++.|.+|+++|++++++.+....+|..+++.+.+.+.+..+|
T Consensus 101 -----------~~~~~~~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 168 (406)
T PRK11551 101 -----------WDFPSLLVARLLTGVGLGGAL-PNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAW 168 (406)
T ss_pred -----------ccHHHHHHHHHHHHhhHHHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 223334444444455444333 34457788999999999999999999999999999988888777777
Q ss_pred hhHHHHHHHHHHH-HHhheeeccCC
Q 012626 400 GIFLFFAGWVTIM-TIFVYFFLPET 423 (459)
Q Consensus 400 ~~~~~~~~~~~l~-~~~~~~~~~~~ 423 (459)
...+...+++.+. ..+...++||+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPES 193 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 6665554444333 33333445554
No 153
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.38 E-value=1.6e-11 Score=119.35 Aligned_cols=176 Identities=12% Similarity=0.065 Sum_probs=127.2
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHH
Q 012626 233 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV 312 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 312 (459)
.+....+..+.............|.+.+++|.+..+.+.......++..++.++.|++.||+|||+.+..+....+++.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 100 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTL 100 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34444444444444555666677888888999999999999999999999999999999999999999888877777766
Q ss_pred HHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 012626 313 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLT 392 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 392 (459)
..... .+.+.......+.+.+.+... +....++.|.+|+++|+.+.++......+|..+++.+.+.
T Consensus 101 ~~~~~-------------~~~~~l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 101 ACGFA-------------PGYWTLFIARLVIGMGMAGEY-GSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHH-------------hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65543 122333344444444444333 3335777899999999999999999999999999999999
Q ss_pred HHhhccchhHHHHHHHHHHHHHhheeeccC
Q 012626 393 LLCSFKFGIFLFFAGWVTIMTIFVYFFLPE 422 (459)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 422 (459)
+.+..+|...+.+..+..+..++.....|+
T Consensus 167 l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~ 196 (496)
T PRK03893 167 VVPVWGWRALFFIGILPIIFALWLRKNLPE 196 (496)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 998888877666554444443333333343
No 154
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.37 E-value=3.6e-12 Score=121.72 Aligned_cols=141 Identities=9% Similarity=0.018 Sum_probs=116.7
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc--cchhHHHH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccc
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY--GRRASIIC--GGISFLLGAALNAAAANLAMLLTGRILLGVGIGF 99 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~--Grr~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 99 (459)
+.|.+..+.+++.+...++..+++++.|+++||. ++|+...+ +.++.+++.+++.+.++++.+++.+++.|++.+.
T Consensus 270 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~ 349 (455)
T TIGR00892 270 DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGS 349 (455)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhch
Confidence 4689999999999999999999999999999984 33433333 3444455556667788999999999999999999
Q ss_pred cchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccc-hhHHHHHhhhHHHHHHHH
Q 012626 100 GNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETW-GWRLSLGLAAAPALMMTV 166 (459)
Q Consensus 100 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~-gwr~~f~~~~~~~~~~~~ 166 (459)
..+...+++.|.+|++++++.+++++....+|.++||.+ .+...+.. +|++.|++.++..++..+
T Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i--~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 350 VGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPL--AGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccc--eeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999 55555554 599999998887665544
No 155
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.37 E-value=1.6e-11 Score=115.49 Aligned_cols=174 Identities=15% Similarity=0.219 Sum_probs=123.7
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHH
Q 012626 237 IFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSI 316 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 316 (459)
..........+........|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.....++......
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 33334444445555666788888889999999999999999999999999999999999999998887777766665543
Q ss_pred HHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 317 ILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 396 (459)
. ++.+.......+.+.+.+... +....++.|.+|+++|+++.++.+....++..++|.+.+.+.+.
T Consensus 88 ~-------------~~~~~~~~~~~l~g~~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 88 A-------------ETSSLFLAGRFLQGIGAGCCY-VVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred h-------------CcHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 112223333333343333222 33457778999999999999999999999999999999888887
Q ss_pred ccchhHHHHHHHH-HHHHHhheeeccCCC
Q 012626 397 FKFGIFLFFAGWV-TIMTIFVYFFLPETK 424 (459)
Q Consensus 397 ~~~~~~~~~~~~~-~l~~~~~~~~~~~~~ 424 (459)
.+|...+.+.++. .+..++.....||++
T Consensus 154 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 154 FPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 7876655554433 344444445556543
No 156
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.36 E-value=1.8e-11 Score=117.15 Aligned_cols=171 Identities=11% Similarity=0.174 Sum_probs=126.0
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hCCchhhhhhhHHHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQS---MGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMIT 309 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~ 309 (459)
++.+....+....+++....+.|.++++ +|++..+++.......++..++.+++|+++|| +|||+.+..+.....+
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 3444445555555667777778878764 79999999999999999999999999999999 8999999999888888
Q ss_pred HHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChh---hhhhhhHHHHHHHHHHHHHH
Q 012626 310 CQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE---TRSAGQSITVAVNLFFTFVI 386 (459)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~ 386 (459)
+.+++... ++.+.......+.+.+.+. ..+...++++|.+|++ .|+++.++.+...++|..++
T Consensus 92 g~~~~~~~-------------~~~~~~~~~~~l~g~g~g~-~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 92 GHFMLAMS-------------IYPDLIFYGLGTIAVGSGL-FKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred HHHHHHhc-------------ccHhHHHHHHHHHHhcccc-ccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 77666542 1122233333333443332 3344457778888765 48889999999999999999
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHHHHhhee
Q 012626 387 AQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYF 418 (459)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 418 (459)
|.+.+.+.++.+|...+...++..+.+.+.+.
T Consensus 158 ~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 158 PLLAGVIAENYGYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887777666655555444443
No 157
>PRK12382 putative transporter; Provisional
Probab=99.35 E-value=1e-11 Score=116.70 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=120.1
Q ss_pred HHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHHhc
Q 012626 32 LAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEM 111 (459)
Q Consensus 32 ~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 111 (459)
.++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+...+.+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45666777888889999999999999999999999999999988888888888888999999999998888888899999
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc
Q 012626 112 APTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 170 (459)
Q Consensus 112 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (459)
+|+++|+++.++.+....+|..++|.+ .+...+..||+..|.+.++..++..+..++
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~--~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPL--AGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998 566666778999999988887776665543
No 158
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.34 E-value=1.1e-11 Score=114.79 Aligned_cols=155 Identities=17% Similarity=0.154 Sum_probs=118.2
Q ss_pred chHHHHHhHH-HHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 247 GINSILFYAP-VLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 247 ~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
.........| .+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.....++.+...+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-------- 82 (352)
T PF07690_consen 11 GFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-------- 82 (352)
T ss_dssp HHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--------
Confidence 3344555566 5666799999999999999999999999999999999999999988888888884444421
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 405 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 405 (459)
++.+..+...++.+.+.+.. .+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+|...+..
T Consensus 83 -----~~~~~~~~~~~l~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~ 156 (352)
T PF07690_consen 83 -----SNFWLLLIARFLLGIGSGFF-SPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLI 156 (352)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHH
T ss_pred -----hhHHHHhhhccccccccccc-cccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccccc
Confidence 12334444455555555433 344468889999999999999999999999999999999999888887766666
Q ss_pred HHHHHHHHHh
Q 012626 406 AGWVTIMTIF 415 (459)
Q Consensus 406 ~~~~~l~~~~ 415 (459)
.++..++..+
T Consensus 157 ~~~~~~~~~i 166 (352)
T PF07690_consen 157 SAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHH
T ss_pred ccchhhhhhh
Confidence 6665555544
No 159
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.34 E-value=4.5e-11 Score=115.59 Aligned_cols=177 Identities=15% Similarity=0.148 Sum_probs=129.5
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHH
Q 012626 233 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV 312 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 312 (459)
.+....+..+....-......-.|.+.+++|.+..+.++....+.++...+.+..|+++||+|||+.+..+.....++.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 34455555555555666677778999889999999999999999999999999999999999999999999888888777
Q ss_pred HHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhccccccccccccc-CChhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 012626 313 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEI-FPLETRSAGQSITVAVNLFFTFVIAQIFL 391 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~~~~~~~~ 391 (459)
..... ++.+..+..-.+.+.+.+... +.....+.+. .|+++|+++.|+......+|..++|.+.+
T Consensus 87 ~~~~a-------------~~~~~li~~r~l~G~g~~~~~-~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg 152 (495)
T PRK14995 87 AAAFS-------------PTASWLIATRALLAIGAAMIV-PATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGG 152 (495)
T ss_pred HHHHc-------------CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76653 223334444444555444333 3223444454 47899999999999999999999999999
Q ss_pred HHHhhccchhHHHHHHHHHHH-HHhheeeccCC
Q 012626 392 TLLCSFKFGIFLFFAGWVTIM-TIFVYFFLPET 423 (459)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~ 423 (459)
.+.++.+|...+.......++ .++....+|+.
T Consensus 153 ~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 153 ILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999998987766665444333 33334445553
No 160
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.34 E-value=1.3e-11 Score=117.49 Aligned_cols=179 Identities=16% Similarity=0.180 Sum_probs=118.1
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 313 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 313 (459)
++...+...........+....|.+.+ .|.++.+.++......++..++.++.|+++||+|||+.+..+.....++.+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~ 107 (438)
T TIGR00712 29 FLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLL 107 (438)
T ss_pred HHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHH
Confidence 344444333333333334555666554 6999999999999999999999999999999999999888877776666555
Q ss_pred HHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 012626 314 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 393 (459)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 393 (459)
...... ...+.+.......+.+.+.+..+.+. ...+.|.+|+++|++++|+.+....+++.+++.+.+..
T Consensus 108 ~~~~~~---------~~~~~~~l~~~~~l~g~~~g~~~~~~-~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 108 MGFVPW---------ATSSIAIMFVLLFLNGWFQGMGWPPC-GRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred Hhcccc---------ccchHHHHHHHHHHHHHHhhcchHHH-HHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 433210 00112222233334444444444333 46667999999999999999999999999999887765
Q ss_pred Hh-hccchhHHHHHHHHH-HHHHhheeeccCC
Q 012626 394 LC-SFKFGIFLFFAGWVT-IMTIFVYFFLPET 423 (459)
Q Consensus 394 ~~-~~~~~~~~~~~~~~~-l~~~~~~~~~~~~ 423 (459)
.+ ..+|...+...++.. +..++.+++.||+
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 54 456776666655443 3344444555554
No 161
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.34 E-value=4.2e-11 Score=112.02 Aligned_cols=175 Identities=12% Similarity=0.077 Sum_probs=126.9
Q ss_pred HHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHH
Q 012626 235 MAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 314 (459)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 314 (459)
+......+.............|.+.+++|.+..+.++..+...++..++.++.|++.||+|||+.+..+....+++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~ 85 (382)
T PRK10091 6 LSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF 85 (382)
T ss_pred HHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 33333444444444556667788888899999999999999999999999999999999999999999888888777665
Q ss_pred HHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 315 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
... ++.+...+...+.+.+.+... +.....+.|.+|+++|+.+.+.......++..+++.+.+.+.
T Consensus 86 ~~~-------------~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 86 TLS-------------SSYLMLAIGRLVSGFPHGAFF-GVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HHh-------------CcHHHHHHHHHHHHhhhHHHH-HHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 543 223334444444454444333 333466778899999999999999999999999999999998
Q ss_pred hhccchhHHHHHHHHHHHH-HhheeeccCC
Q 012626 395 CSFKFGIFLFFAGWVTIMT-IFVYFFLPET 423 (459)
Q Consensus 395 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~ 423 (459)
+..+|...+...++..+.. +......|+.
T Consensus 152 ~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 152 QEFSWRYTFLLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 8888876666655544333 3333445654
No 162
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.33 E-value=8.5e-11 Score=112.91 Aligned_cols=155 Identities=11% Similarity=0.010 Sum_probs=106.3
Q ss_pred chHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCc
Q 012626 247 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 326 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (459)
.........|.+.+++|++..+.+...+...++..++.++.|+++||+|||+.+..+.+...++.++....
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~--------- 121 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV--------- 121 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh---------
Confidence 33445556677888899999999998888889999999999999999999999888777666665544443
Q ss_pred cccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh----h-----c
Q 012626 327 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC----S-----F 397 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~----~-----~ 397 (459)
.+.+......++.+.+.+. ..+. ..+++|.+|+++|+++.|+.+...++|..+++.+.+.+.. . .
T Consensus 122 ----~s~~~l~~~r~l~G~~~~~-~~~~-~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 195 (476)
T PLN00028 122 ----SSATGFIAVRFFIGFSLAT-FVSC-QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFT 195 (476)
T ss_pred ----cCHHHHHHHHHHHHHHHHh-hHHH-HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchh
Confidence 1122222333333433332 2232 3567899999999999999998888888888776655432 1 3
Q ss_pred cchhHHHHHHHHHHHHHhh
Q 012626 398 KFGIFLFFAGWVTIMTIFV 416 (459)
Q Consensus 398 ~~~~~~~~~~~~~l~~~~~ 416 (459)
+|...+.+.+++.++..+.
T Consensus 196 gWr~~f~i~g~l~l~~~l~ 214 (476)
T PLN00028 196 AWRIAFFVPGLLHIIMGIL 214 (476)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 5766666655544443333
No 163
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.32 E-value=2.1e-11 Score=118.16 Aligned_cols=174 Identities=13% Similarity=0.157 Sum_probs=127.7
Q ss_pred HHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHH
Q 012626 236 AIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVS 315 (459)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 315 (459)
.+.+..+.............|.+.+++|.+..+.++......++..++.++.|++.||+|||+.+..+.....++.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 85 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCG 85 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHh
Confidence 34444444444556677778888889999999999999999999999999999999999999999888887777766554
Q ss_pred HHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 316 IILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
.. ++.+..+....+.+.+.+. ..+....++.|.+|+++|+++.++......+|..++|.+.+.+.+
T Consensus 86 ~~-------------~~~~~l~~~~~~~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 151 (485)
T TIGR00711 86 VA-------------PNLELMIIFRVIQGFGGGP-LIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE 151 (485)
T ss_pred Cc-------------CCHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc
Confidence 32 2233334444444444443 334456888999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHH-HhheeeccCC
Q 012626 396 SFKFGIFLFFAGWVTIMT-IFVYFFLPET 423 (459)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~-~~~~~~~~~~ 423 (459)
+.+|...+.......++. ++..+..|++
T Consensus 152 ~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 152 NYHWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred CcCceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 888776665544433333 3333344443
No 164
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.31 E-value=1.6e-11 Score=118.00 Aligned_cols=149 Identities=13% Similarity=0.008 Sum_probs=111.6
Q ss_pred CCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHhhcc
Q 012626 20 HENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALN--AAAANLAMLLTGRILLGVGI 97 (459)
Q Consensus 20 ~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~ 97 (459)
.+++++|+|..+.++..+...++..++.+++|+++||+|||+.+.....+..++..+. ...++.+...+.+++.|++.
T Consensus 284 yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 363 (467)
T PRK09556 284 YAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLV 363 (467)
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3556789999999999999999999999999999999999988766554444433222 23346666778888888654
Q ss_pred cccchhhhHHHHhccCCCcchHHHHHHHHHHHH-HHHHHHHHhhhhhccc------------cchhHHHHHhhhHHHHHH
Q 012626 98 GFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTL-GIFTANMINYGTQKLE------------TWGWRLSLGLAAAPALMM 164 (459)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~~~~~~------------~~gwr~~f~~~~~~~~~~ 164 (459)
............|.+|+++|+.+.|+.+...++ |..++|.+ .+...+ ..+|+..|++.++..++.
T Consensus 364 ~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~--~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~ 441 (467)
T PRK09556 364 FGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVG--LGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGC 441 (467)
T ss_pred hhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhh--HHHHhcccccccccccccccChHHHHHHHHHHHHHH
Confidence 443333346777999999999999999988886 77888887 444444 457999999887777776
Q ss_pred HHHHhc
Q 012626 165 TVGGIL 170 (459)
Q Consensus 165 ~~~~~~ 170 (459)
.+..++
T Consensus 442 ~~~~~~ 447 (467)
T PRK09556 442 ICLMAI 447 (467)
T ss_pred HHHHHH
Confidence 555543
No 165
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.31 E-value=1.5e-10 Score=112.21 Aligned_cols=152 Identities=20% Similarity=0.187 Sum_probs=108.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHH
Q 012626 265 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFV 344 (459)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
+..+.++......++.+++.++.|++.||+|||+.+..+..+..++.++...... . .+....+..+..-++.+
T Consensus 54 ~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~-----~--~~~~~~~~~~~~r~l~G 126 (502)
T TIGR00887 54 PSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPG-----S--SPKSVMATLCFWRFWLG 126 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccC-----c--ccchHHHHHHHHHHHHH
Confidence 3446678899999999999999999999999999998887777776655544210 0 00001233444445555
Q ss_pred HHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh-----------------------hccchh
Q 012626 345 LAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC-----------------------SFKFGI 401 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~-----------------------~~~~~~ 401 (459)
.+.+.... ....+++|.+|++.|+++.++.+....+|..+++.+...+.. ..+|..
T Consensus 127 ~~~g~~~~-~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~ 205 (502)
T TIGR00887 127 VGIGGDYP-LSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRI 205 (502)
T ss_pred HHHhhhhH-HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHH
Confidence 55554444 346889999999999999999999999999888888765532 125777
Q ss_pred HHHHHHHHHHHHHhheeeccCCC
Q 012626 402 FLFFAGWVTIMTIFVYFFLPETK 424 (459)
Q Consensus 402 ~~~~~~~~~l~~~~~~~~~~~~~ 424 (459)
.+.+.++..++..+..+++||+.
T Consensus 206 ~~~~~~ip~~i~~~~~~~lpESp 228 (502)
T TIGR00887 206 LIGFGAVPALLALYFRLTIPETP 228 (502)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCH
Confidence 77666666666666667788863
No 166
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.31 E-value=5.8e-11 Score=109.69 Aligned_cols=162 Identities=10% Similarity=-0.044 Sum_probs=114.5
Q ss_pred hHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcc
Q 012626 248 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 327 (459)
Q Consensus 248 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (459)
...+....|.+.+++|.++.+.++..+...++..++++..|+++||+|||+.+.........+. .....
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~~~~---------- 75 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GRLLD---------- 75 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHH----------
Confidence 3455666788888899999999999999999999999999999999998887654433332221 11111
Q ss_pred ccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 012626 328 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAG 407 (459)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (459)
..+....+..-.+.+.+.+. ..+. ....+|.+|+++|+++.++.+....+|..+++.+.+.+.++.+|...+...+
T Consensus 76 --~~~~~~l~~~R~l~G~g~~~-~~~~-~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~ 151 (368)
T TIGR00903 76 --PFNYEWLLACQLLAALGQPF-LLNA-FAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIA 151 (368)
T ss_pred --hccHHHHHHHHHHHHhHhHH-HHHH-HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 01223334444444444442 2222 3445799999999999999999999999999999999999889987776644
Q ss_pred H-HHHHHHhheeeccCCC
Q 012626 408 W-VTIMTIFVYFFLPETK 424 (459)
Q Consensus 408 ~-~~l~~~~~~~~~~~~~ 424 (459)
+ ..+..++.++.+||.+
T Consensus 152 ~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 152 AVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHcCCCC
Confidence 4 4444555556667654
No 167
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.31 E-value=1e-10 Score=110.08 Aligned_cols=162 Identities=15% Similarity=0.134 Sum_probs=115.3
Q ss_pred HHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc
Q 012626 249 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 328 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (459)
.......|.+.+++|.++.+.+.......++..++.++.|+++||+|||+.+..+.....++.+.....
T Consensus 25 ~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~----------- 93 (394)
T PRK11652 25 TIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA----------- 93 (394)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-----------
Confidence 344445677888899999999999999999999999999999999999999988877766666554432
Q ss_pred cchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 012626 329 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGW 408 (459)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (459)
++.+..+....+.+.+.+. ..+....+..|.++.++++.+.+..+....++..++|.+.+.+.+..+|...+.+.++
T Consensus 94 --~~~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~ 170 (394)
T PRK11652 94 --HSLTVLIAASAIQGLGTGV-GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLL 170 (394)
T ss_pred --ccHHHHHHHHHHHHhhhhH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHH
Confidence 1122233333333333332 2233345667888888999999999999999999999999999888888766665544
Q ss_pred HHH-HHHhheeeccCCC
Q 012626 409 VTI-MTIFVYFFLPETK 424 (459)
Q Consensus 409 ~~l-~~~~~~~~~~~~~ 424 (459)
..+ ...+..+..||++
T Consensus 171 ~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 171 LGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHHhCCccC
Confidence 333 3333444556643
No 168
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.30 E-value=4.9e-11 Score=114.10 Aligned_cols=162 Identities=15% Similarity=0.192 Sum_probs=108.4
Q ss_pred HHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc
Q 012626 251 ILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 330 (459)
Q Consensus 251 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (459)
+....|++.++ |++..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+.+.+... ..
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~---------~~ 117 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW---------AT 117 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc---------cc
Confidence 45566777666 999999999999999999999999999999999999998888877777765554310 00
Q ss_pred hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHH-HHHHhhccchhHHHHHHHH
Q 012626 331 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF-LTLLCSFKFGIFLFFAGWV 409 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 409 (459)
.+.+..+....+.+.+.+....+. ...+.|.+|+++|++++|+.+....+|+.+.+++. ..+....+|...+.+.++.
T Consensus 118 ~~~~~~~~~~~l~gi~~g~~~~~~-~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~ 196 (452)
T PRK11273 118 SSIAVMFVLLFLCGWFQGMGWPPC-GRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFA 196 (452)
T ss_pred ccHHHHHHHHHHHHHHHhccchHH-HHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 112233333344455555444333 35567889999999999999998888875544443 3333334665555554433
Q ss_pred -HHHHHhheeeccCC
Q 012626 410 -TIMTIFVYFFLPET 423 (459)
Q Consensus 410 -~l~~~~~~~~~~~~ 423 (459)
.+..++..+++||+
T Consensus 197 ~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 197 AILVALFAFAMMRDT 211 (452)
T ss_pred HHHHHHHHHHHccCC
Confidence 33344444555654
No 169
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.30 E-value=7.8e-11 Score=111.13 Aligned_cols=157 Identities=11% Similarity=0.096 Sum_probs=115.6
Q ss_pred hHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhh
Q 012626 254 YAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 333 (459)
Q Consensus 254 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (459)
-.|.+.++++.+..+.+...+...++..++.++.|+++||+|||+.+..+.....++.+..... ++.
T Consensus 38 ~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------------~~~ 104 (413)
T PRK15403 38 GIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT-------------TSM 104 (413)
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-------------CCH
Confidence 3455666799999999999999999999999999999999999999988877777666555442 223
Q ss_pred hHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 012626 334 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMT 413 (459)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 413 (459)
+..+..-++.+.+.+. ..+....+..|.+|++++++++++.+....++..++|.+.+.+.+..+|...+...++..+++
T Consensus 105 ~~l~~~r~l~Gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~ 183 (413)
T PRK15403 105 TQFLIARFIQGTSICF-IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIA 183 (413)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 3333333444443332 233445677899999999999999999999999999999999888888877776666554444
Q ss_pred Hhh-eeeccCCC
Q 012626 414 IFV-YFFLPETK 424 (459)
Q Consensus 414 ~~~-~~~~~~~~ 424 (459)
.+. .+.+||++
T Consensus 184 ~~~~~~~lp~~~ 195 (413)
T PRK15403 184 FVGLLLAMPETV 195 (413)
T ss_pred HHHHHHhCCCCc
Confidence 433 34466653
No 170
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.30 E-value=1.4e-10 Score=109.71 Aligned_cols=168 Identities=14% Similarity=0.134 Sum_probs=116.4
Q ss_pred HHhhhcchHHHHHhHHHHHHhcCCCCch-----hHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHH
Q 012626 241 MFQILTGINSILFYAPVLFQSMGFKGDA-----SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVS 315 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 315 (459)
.+...........+.|.+.+++|.+..+ .+.......+...++.++.|+++||+|||+.+..+.....++..++.
T Consensus 23 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 102 (408)
T PRK09874 23 CFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMG 102 (408)
T ss_pred HHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHH
Confidence 3334444455666788888888888654 37778888899999999999999999999999887777666665544
Q ss_pred HHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 316 IILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
.. ++.+..++...+.+.+. +..+....++.+..|+++|+.+.++.+....+|..++|.+.+.+.+
T Consensus 103 ~~-------------~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 167 (408)
T PRK09874 103 LA-------------QNIWQFLILRALLGLLG--GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD 167 (408)
T ss_pred HH-------------hhHHHHHHHHHHHHHhh--hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 12223333333333332 2234445667788999999999999999999999999999999988
Q ss_pred hccchhHHHHHHHHHHHHH-hheeeccCC
Q 012626 396 SFKFGIFLFFAGWVTIMTI-FVYFFLPET 423 (459)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~-~~~~~~~~~ 423 (459)
..++...+...++..+... ...+..+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 168 SYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8887766655554444333 333444443
No 171
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.30 E-value=1.4e-10 Score=108.87 Aligned_cols=161 Identities=12% Similarity=0.133 Sum_probs=115.7
Q ss_pred chHHHHHhHHHH-HHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 247 GINSILFYAPVL-FQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 247 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
.......+.+.+ .++.|+++.+.++......+...+..++.|+++||+|||+.+..+.....++.+.....
T Consensus 25 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-------- 96 (400)
T PRK11646 25 GFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA-------- 96 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh--------
Confidence 334444455544 45689999999999999999999999999999999999999998888888877766543
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFF 405 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 405 (459)
++.+.......+.+.+.+. ..+...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+. ..++...+.+
T Consensus 97 -----~~~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~ 169 (400)
T PRK11646 97 -----HEPWLLWLSCILSGLGGTL-FDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCAT 169 (400)
T ss_pred -----ccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHH
Confidence 2233334444444444432 33444577789999999999999999999999999999999988 6677665555
Q ss_pred HHHHHHH-HHhheeeccC
Q 012626 406 AGWVTIM-TIFVYFFLPE 422 (459)
Q Consensus 406 ~~~~~l~-~~~~~~~~~~ 422 (459)
.++..++ +++..+..|+
T Consensus 170 ~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 170 GAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHhCCc
Confidence 4444333 3333334444
No 172
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.30 E-value=1.1e-10 Score=111.79 Aligned_cols=172 Identities=15% Similarity=0.193 Sum_probs=122.3
Q ss_pred HHHHHHHHhhhcchHHHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hCCchhhhhhhHHHHHHHH
Q 012626 235 MAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMITCQV 312 (459)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~ 312 (459)
+..+...+.....++....+.+.+++ ++|++..++.+..........+..+++|+++|| +|||+.+..+.....++.+
T Consensus 17 ~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~ 96 (489)
T PRK10207 17 FMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYF 96 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHH
Confidence 33333444455556666666666655 499999988888888887777788899999999 9999999999999888887
Q ss_pred HHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChh--hhhhhhHHHHHHHHHHHHHHHHHH
Q 012626 313 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE--TRSAGQSITVAVNLFFTFVIAQIF 390 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~ 390 (459)
.+.+.. ...........+.+.+.+ ...+...+++.|.+|++ +|+.+.++.+...++|..++|.+.
T Consensus 97 ~~~~~~------------~~~~ll~~~~~l~~ig~g-~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 97 MTGMSL------------LKPDLIFIALGTIAVGNG-LFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred HHHHhc------------cchhHHHHHHHHHHhccc-cccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence 766531 111222233333344434 33344468889999877 457789999999999999999999
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHhheee
Q 012626 391 LTLLCSFKFGIFLFFAGWVTIMTIFVYFF 419 (459)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 419 (459)
+++.++.+|...+....+..+.+++.+..
T Consensus 164 g~l~~~~gw~~~F~i~~i~~~~~~~~~~~ 192 (489)
T PRK10207 164 PVIADKFGYSVTYNLCGAGLIIALLVYFA 192 (489)
T ss_pred HHHHHhhChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999877777665555544444433
No 173
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.29 E-value=9.4e-10 Score=101.36 Aligned_cols=102 Identities=15% Similarity=0.110 Sum_probs=91.4
Q ss_pred HHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHHhccCCC
Q 012626 36 TSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTH 115 (459)
Q Consensus 36 ~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 115 (459)
.++.+....+++++.+.+.|+.|+|..+.++...+..-.+..-+. |-+-++..-.+.|+|.+..+..--.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 677788888999999999999999999999999998877776444 5667888899999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHH
Q 012626 116 LRGGLNMMFQLATTLGIFTANMI 138 (459)
Q Consensus 116 ~r~~~~~~~~~~~~~G~~~g~~~ 138 (459)
++.+..++.......+.++|...
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHh
Confidence 99999999999999999998766
No 174
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.29 E-value=1.3e-11 Score=119.33 Aligned_cols=148 Identities=18% Similarity=0.088 Sum_probs=109.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHH
Q 012626 265 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFV 344 (459)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
+..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.++..... .....+..++...+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~r~l~G 138 (481)
T TIGR00879 69 SSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAA----------FALSVEMLIVGRVLLG 138 (481)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhc----------cccchHHHHHHHHHHH
Confidence 378899999999999999999999999999999999888887777766664431 0111223444445555
Q ss_pred HHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHH---HHHHhhccchhHHHHHHHHHHHHHhheeecc
Q 012626 345 LAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF---LTLLCSFKFGIFLFFAGWVTIMTIFVYFFLP 421 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 421 (459)
.+.+... +....++.|.+|+++|+.+.++.+....+|..+++.+. +...+..+|...+.+.++..+..++..++++
T Consensus 139 ~~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~ 217 (481)
T TIGR00879 139 IGVGIAS-ALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLP 217 (481)
T ss_pred hhhhHHH-hHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5554433 34467889999999999999999999999999999988 5544566777666666666666655566666
Q ss_pred CC
Q 012626 422 ET 423 (459)
Q Consensus 422 ~~ 423 (459)
|+
T Consensus 218 ~~ 219 (481)
T TIGR00879 218 ES 219 (481)
T ss_pred CC
Confidence 65
No 175
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.29 E-value=4.5e-11 Score=111.78 Aligned_cols=142 Identities=13% Similarity=0.023 Sum_probs=125.5
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchh
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 103 (459)
|.|.++.+.|.+.+...++..++.++.+++.||+|+|+.+.++.++..+..++.+++++.+.+++.+++.|+..+...+.
T Consensus 234 ~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~ 313 (382)
T TIGR00902 234 AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLA 313 (382)
T ss_pred HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhccCCCcchHHHHHHH-HHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHh
Q 012626 104 VPLYLSEMAPTHLRGGLNMMFQ-LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI 169 (459)
Q Consensus 104 ~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~ 169 (459)
...++.+. |+++|++..++++ ...++|..+|+.+ ++...+..|+ ..|++.++++++..++..
T Consensus 314 ~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~--~G~l~~~~g~-~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 314 AMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAF--AGFIYPTLGA-GTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred HHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhccH-HHHHHHHHHHHHHHHHHH
Confidence 99999998 9999999999986 5788999999999 5666666676 667777777766554433
No 176
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.29 E-value=1.4e-10 Score=109.59 Aligned_cols=164 Identities=13% Similarity=0.115 Sum_probs=116.7
Q ss_pred chHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCc
Q 012626 247 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 326 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (459)
....+....|.+.+++|.++.+.+.......++..++.++.|+++||+|||+.+..+.....++.+.....
T Consensus 28 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--------- 98 (406)
T PRK15402 28 ANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA--------- 98 (406)
T ss_pred hhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---------
Confidence 33444445566778899999999999999999999999999999999999999988877777766655443
Q ss_pred cccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 012626 327 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFA 406 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 406 (459)
++.+..+....+.+.+.+.. .+.....+.|.+|++.|.++.++......++..++|.+.+.+.+..+|...+.+.
T Consensus 99 ----~~~~~l~~~~~l~G~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~ 173 (406)
T PRK15402 99 ----QSIEQFTLLRFLQGIGLCFI-GAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLF 173 (406)
T ss_pred ----ccHHHHHHHHHHHHhHhhhH-HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 11222333333333333322 2344567789999999999999998888899999999999998888877666655
Q ss_pred HHHHHHHHh-heeeccCCC
Q 012626 407 GWVTIMTIF-VYFFLPETK 424 (459)
Q Consensus 407 ~~~~l~~~~-~~~~~~~~~ 424 (459)
+++.++..+ .+...||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 174 AALAALSFFGLWRAMPETA 192 (406)
T ss_pred HHHHHHHHHHHHHhCCCCC
Confidence 544443333 334456543
No 177
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.29 E-value=1.5e-10 Score=107.84 Aligned_cols=145 Identities=12% Similarity=0.036 Sum_probs=106.7
Q ss_pred HHHHHHhhhcchHHHHHhHHH-HHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHH
Q 012626 237 IFMPMFQILTGINSILFYAPV-LFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVS 315 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 315 (459)
..+..+...........+.|. +.+++|+++.+.++......++..++.++.|+++||+|||+.+..+.....++.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~ 85 (366)
T TIGR00886 6 SWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAG 85 (366)
T ss_pred HHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 333344444455667777785 5567999999999999999999999999999999999999999998888887776665
Q ss_pred HHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 316 IILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
... .+.+.......+.+.+.+ ...+ ...++.|.+|+++|+.+.++......+|..+++.+.+.+..
T Consensus 86 ~~~------------~~~~~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 86 LAV------------QSYSVLLLLRLFIGIAGG-SFAS-CMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHh------------hhHHHHHHHHHHHHHhch-hhHh-HHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 431 022333333333343322 3333 35778899999999999999998888888888877776654
No 178
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.28 E-value=1.7e-10 Score=108.18 Aligned_cols=156 Identities=10% Similarity=0.101 Sum_probs=112.9
Q ss_pred HHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcccc
Q 012626 250 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 329 (459)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (459)
......+.+.++++.++.+.++......+...+..++.|++.||+|||+++..+....+++.+.+....
T Consensus 21 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~----------- 89 (393)
T PRK11195 21 ALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI----------- 89 (393)
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH-----------
Confidence 344444555677888888899999999999999999999999999999999998887777665543321
Q ss_pred chhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 012626 330 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 409 (459)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (459)
+ . +...++.+.+.+ ...|...+++.|.+|+++|+++.|+.+....++..++|.+.|.+.+.. +...+...+.+
T Consensus 90 -~-~---~~~r~l~G~~~a-~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~ 162 (393)
T PRK11195 90 -H-P---LLAYGLVGIGAA-AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALI 162 (393)
T ss_pred -H-H---HHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 1 1 222233344433 445565788899999999999999999999999999999999998854 43333333333
Q ss_pred HHHHHhheeeccCC
Q 012626 410 TIMTIFVYFFLPET 423 (459)
Q Consensus 410 ~l~~~~~~~~~~~~ 423 (459)
.+.+.+....+||.
T Consensus 163 ~~~~~~~~~~l~~~ 176 (393)
T PRK11195 163 YLLAALFNLFIPRL 176 (393)
T ss_pred HHHHHHHHhcCCCC
Confidence 34444444556654
No 179
>PRK11043 putative transporter; Provisional
Probab=99.28 E-value=2.2e-10 Score=108.04 Aligned_cols=154 Identities=12% Similarity=0.045 Sum_probs=110.3
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhh
Q 012626 255 APVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 334 (459)
Q Consensus 255 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (459)
.|.+.+++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.....++.+..... ++.+
T Consensus 29 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------------~~~~ 95 (401)
T PRK11043 29 FKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV-------------ESAA 95 (401)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh-------------cCHH
Confidence 344566799999999999999999999999999999999999999988877766665554432 1122
Q ss_pred HHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 012626 335 LVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTI 414 (459)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 414 (459)
.......+.+.+.+... +....++.|.+|+++++...+..+....++..++|.+.+.+.+..+|...+....+..+...
T Consensus 96 ~l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~ 174 (401)
T PRK11043 96 QLLVLRFVQAVGVCSAA-VIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLI 174 (401)
T ss_pred HHHHHHHHHHhhhHHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 23333333333332222 23346678999999899999999888999999999999999998888776665555544444
Q ss_pred hheeeccC
Q 012626 415 FVYFFLPE 422 (459)
Q Consensus 415 ~~~~~~~~ 422 (459)
+..+..++
T Consensus 175 ~~~~~~~~ 182 (401)
T PRK11043 175 LPTLRLKP 182 (401)
T ss_pred HHHHHcCC
Confidence 44344443
No 180
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.27 E-value=1.9e-10 Score=107.67 Aligned_cols=150 Identities=7% Similarity=-0.055 Sum_probs=113.6
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 313 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 313 (459)
++...+..+.............|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+.+..+.....++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555555566677778899999999999999999999999999999999999999999999999888887777666
Q ss_pred HHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 012626 314 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 393 (459)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 393 (459)
.... ++.+..+....+.+.+.+... +.......+..++++|+++.+..+....+|..++|.+.+.+
T Consensus 88 ~~~~-------------~~~~~l~~~~~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 88 LGLM-------------VGFWSWLAWRFVAGIGCAMIW-VVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHHh-------------ccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5543 223333444444444444332 32234455778888999999999999999999999999987
Q ss_pred Hhhc
Q 012626 394 LCSF 397 (459)
Q Consensus 394 ~~~~ 397 (459)
.+..
T Consensus 154 ~~~~ 157 (381)
T PRK03633 154 STEL 157 (381)
T ss_pred cccc
Confidence 6653
No 181
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.27 E-value=3.3e-11 Score=115.91 Aligned_cols=145 Identities=14% Similarity=0.021 Sum_probs=108.4
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHH
Q 012626 261 SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 340 (459)
Q Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (459)
+++++..+.+.+.....++..++.++.|++.||+|+|+.+..+.+...++.++..... ....+..++.-
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r 138 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA-----------GGGIALVVFCR 138 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH-----------HcCchHHHHHH
Confidence 4678888899999999999999999999999999999999888777666665543321 01122333333
Q ss_pred HHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHHHHHHHHHHHHhhe
Q 012626 341 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF-KFGIFLFFAGWVTIMTIFVY 417 (459)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~ 417 (459)
++.+.+.+ ...+....+++|.+|+++|+++.|+.+....+|..+++.+.+.+.+.. +|...+.+.++..++..+.+
T Consensus 139 ~~~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~ 215 (465)
T TIGR00894 139 VIQGLAQG-SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLW 215 (465)
T ss_pred HHHHHhcc-cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHH
Confidence 44444444 334445678899999999999999999999999999999999999884 88776666655544444333
No 182
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.27 E-value=3e-10 Score=109.87 Aligned_cols=160 Identities=12% Similarity=0.024 Sum_probs=107.7
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHH
Q 012626 263 GFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICL 342 (459)
Q Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (459)
+.+..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+.......... .....+.......++.-++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFT-SIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccc-cccccchhHHHHHHHHHHH
Confidence 778889999999999999999999999999999999999988877766655443210000 0000001111222333344
Q ss_pred HHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH--------hhccchhHHHHHHHHHHHHH
Q 012626 343 FVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL--------CSFKFGIFLFFAGWVTIMTI 414 (459)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~ 414 (459)
.+.+.+... +...++++|.+|+++|+.++++.+....+|..+++.+.+.+. +..+|...+...++..++..
T Consensus 130 ~G~~~g~~~-~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 130 GGIGVGLAS-MLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred HhhhHhHHh-hHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 455544333 444678899999999999999999988899888876655443 23467666666555555555
Q ss_pred hheeeccCCC
Q 012626 415 FVYFFLPETK 424 (459)
Q Consensus 415 ~~~~~~~~~~ 424 (459)
+..+++||+.
T Consensus 209 ~~~~~l~~s~ 218 (479)
T PRK10077 209 MLLYFVPETP 218 (479)
T ss_pred HHHHcCCCCc
Confidence 5556677754
No 183
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=1.2e-10 Score=109.60 Aligned_cols=143 Identities=11% Similarity=-0.051 Sum_probs=102.0
Q ss_pred chHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCc
Q 012626 247 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 326 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (459)
.......+.+.+.+++|.++.+.+...+...++..++.++.|++.||+|||+.+..+.....++.+.......
T Consensus 28 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~------- 100 (402)
T TIGR00897 28 GDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGL------- 100 (402)
T ss_pred hhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 3344455666777889999999999999999999999999999999999999998888877776554322110
Q ss_pred cccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHH-HHHHHHHHHHHhhccc
Q 012626 327 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFT-FVIAQIFLTLLCSFKF 399 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~~~~~~~~~~~~~~ 399 (459)
...+.+.......+.+.+.+.... .....+.+.+|+++|++++|+.+....+|. ..+|.+.+.+.+..++
T Consensus 101 --~~~~~~~l~~~~~i~G~g~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~ 171 (402)
T TIGR00897 101 --GHANYPLILLFYGIRGLGYPLFAY-SFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGE 171 (402)
T ss_pred --cCccHHHHHHHHHHHHcchHHHHh-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccch
Confidence 011222223333333433332222 223556688899999999999999999986 5788888888877774
No 184
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.26 E-value=3.8e-10 Score=103.61 Aligned_cols=160 Identities=10% Similarity=0.105 Sum_probs=126.2
Q ss_pred HHHHHhHHHHHHhcCCCCch-hHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcc
Q 012626 249 NSILFYAPVLFQSMGFKGDA-SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 327 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (459)
....+..|++.+++|++..+ .+.+......+..+..+..|+++||+|.|+.+..+.+...+..++..+.
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa---------- 112 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG---------- 112 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH----------
Confidence 44555677777889999999 9999999999999999999999999999999999888888888777765
Q ss_pred ccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccch---hHHH
Q 012626 328 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFG---IFLF 404 (459)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~ 404 (459)
.....+.+.-++.+.+-+..+ ....++...+|+++|+++.|+.+....+|.++++++.+. ....+|. ....
T Consensus 113 ---~Sl~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~ 186 (511)
T TIGR00806 113 ---TSVWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNI 186 (511)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHH
Confidence 224445555566666666666 346788899999999999999999999999999999999 4456643 3344
Q ss_pred HHHHHHHHHHhheeeccCCC
Q 012626 405 FAGWVTIMTIFVYFFLPETK 424 (459)
Q Consensus 405 ~~~~~~l~~~~~~~~~~~~~ 424 (459)
+......+++++.+++|..+
T Consensus 187 Isl~s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 187 ISLVFMTFSVFLALFLKRPK 206 (511)
T ss_pred HHHHHHHHHHHHHHhCCCCc
Confidence 45555566666777777443
No 185
>PRK09952 shikimate transporter; Provisional
Probab=99.25 E-value=1.1e-10 Score=110.97 Aligned_cols=154 Identities=12% Similarity=0.013 Sum_probs=111.4
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHhhcc
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA----ANLAMLLTGRILLGVGI 97 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~ 97 (459)
++++|.+......+.........++.++.|+++||+|||+++..+.++..++.+..... ++.+.+++..++.|++.
T Consensus 278 ~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 357 (438)
T PRK09952 278 TQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAH 357 (438)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 45567777766666666667778888999999999999999888877666554433321 23444455667778888
Q ss_pred cccchhhhHHHHhccCCCcchHHHHHHH-HHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCCh
Q 012626 98 GFGNQAVPLYLSEMAPTHLRGGLNMMFQ-LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETP 175 (459)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p 175 (459)
+...+...+++.|.+|.+.|+...++.. .+..+|..++|.+..........+|+..+...++..++..+..+.++|++
T Consensus 358 ~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence 8878888999999999999988888854 44558888899884333222233588888888888877777766677654
No 186
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.24 E-value=1.8e-10 Score=107.73 Aligned_cols=160 Identities=19% Similarity=0.219 Sum_probs=118.9
Q ss_pred HHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcccc
Q 012626 250 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS 329 (459)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (459)
...-..|.+.+++|.++.+.+...+...++..++.++.|++.||+|||+.+..+.....++.......
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~------------ 76 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA------------ 76 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH------------
Confidence 34445677778899999999999999999999999999999999999999988888777777766543
Q ss_pred chhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 012626 330 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 409 (459)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (459)
++.+.......+.+.+.+.. .+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..+|...+...+..
T Consensus 77 -~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 154 (377)
T PRK11102 77 -QTIDQLIYMRFLHGLAAAAA-SVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALA 154 (377)
T ss_pred -ccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 12233333344444444433 3334577889999999999999999999999999999999999888876665554444
Q ss_pred HH-HHHhheeeccCC
Q 012626 410 TI-MTIFVYFFLPET 423 (459)
Q Consensus 410 ~l-~~~~~~~~~~~~ 423 (459)
.+ ..+...+..||+
T Consensus 155 ~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 155 AILAAALVFFFIPET 169 (377)
T ss_pred HHHHHHHHHHhCCcc
Confidence 33 333444455554
No 187
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.23 E-value=3.7e-10 Score=106.13 Aligned_cols=137 Identities=10% Similarity=-0.007 Sum_probs=106.5
Q ss_pred chHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCc
Q 012626 247 GINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQ 326 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (459)
.........|.+.+++|.+..+.++..+...++..++.+..|++.||+|||+.+..+..+.+++.++.....
T Consensus 18 ~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~-------- 89 (410)
T TIGR00885 18 ANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAA-------- 89 (410)
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--------
Confidence 334455667888788999999999999999999999999999999999999999999988888876654321
Q ss_pred cccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 327 ELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
..++.+..+...++.+.+.+....+. ..++.+..|++++++..++.+....+|..++|.+.+.+.
T Consensus 90 --~~~~~~~~l~~~~l~G~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 90 --EIMNYTLFLVGLFILTAGLGFLETAA-NPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred --hhccHHHHHHHHHHHHhhHHHHHhhh-hHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01123334444555555555544443 466778889999999999999999999999999988775
No 188
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.22 E-value=4.5e-10 Score=108.13 Aligned_cols=152 Identities=13% Similarity=0.084 Sum_probs=116.8
Q ss_pred CCCccccCchhHHHHHH-hHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHH---HHH-HhHHHHHHHHHHHhh
Q 012626 21 ENNYCKYDNQGLAAFTS-SLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALN---AAA-ANLAMLLTGRILLGV 95 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s-~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~l~G~ 95 (459)
+.++.|.+..+.+++.. ...++..++.+++|+++||+|||+.+..+.++.+++.+.. +.. ++.+.+.+.-+++.+
T Consensus 249 l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~ 328 (491)
T PRK11010 249 LIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENL 328 (491)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 34567999999999974 5668999999999999999999988777666555544332 232 345555556666665
Q ss_pred cccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCC
Q 012626 96 GIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPET 174 (459)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~ 174 (459)
..|...+...++..+..+++.++...++.+...++|..+++++ .+...+..||+..|.+.++.+++..+...+++++
T Consensus 329 ~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~--~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 329 CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV--AGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5565667778899999999999999999999999998888877 5555666789999999999888877766665543
No 189
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.22 E-value=7.1e-10 Score=103.59 Aligned_cols=151 Identities=13% Similarity=0.032 Sum_probs=104.4
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHH-hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHH
Q 012626 233 LVMAIFMPMFQILTGINSILFYAPVLFQ-SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQ 311 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 311 (459)
.++...+.....+.....+....+.+.+ ++|++..+.+++.+...+...++++..|++.||+|.|+.+..+.....+..
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~ 114 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPC 114 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 3444555555555555555555566555 599999999999999999999999999999999999999988888877766
Q ss_pred HHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 012626 312 VIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFL 391 (459)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~ 391 (459)
+...+... ...++.+..++...+.+.+ +..+. .....+++.+|+++||++.|+....+++|..+++.+.+
T Consensus 115 ~~~~~a~~--------~~~~s~~~lli~r~l~Gig-g~~f~-~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 115 VWLGIAVQ--------NPNTPFGIFIVIALLCGFA-GANFA-SSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred HHHHHHHc--------ccCCCHHHHHHHHHHHHHH-HHhHH-HHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 65554310 0011223333333444443 33333 34577889999999999999998777777776666655
Q ss_pred HH
Q 012626 392 TL 393 (459)
Q Consensus 392 ~~ 393 (459)
.+
T Consensus 185 ~~ 186 (462)
T PRK15034 185 LV 186 (462)
T ss_pred HH
Confidence 43
No 190
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.20 E-value=6.3e-10 Score=107.24 Aligned_cols=166 Identities=13% Similarity=0.069 Sum_probs=112.9
Q ss_pred HHHHHHHHhhhcchHHHHHhHHHHH-HhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hCCchhhhhhhHHHHHHHH
Q 012626 235 MAIFMPMFQILTGINSILFYAPVLF-QSMGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMITCQV 312 (459)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~ 312 (459)
+..+...++....++....+.+.++ +++|++..+++..............+++|+++|| +|||+.+..+.....++..
T Consensus 24 ~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~ 103 (500)
T PRK09584 24 YLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYA 103 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 3344444445555666777777776 4599998888777766665555556789999999 5999999998888887766
Q ss_pred HHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChh--hhhhhhHHHHHHHHHHHHHHHHHH
Q 012626 313 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE--TRSAGQSITVAVNLFFTFVIAQIF 390 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~~~~~~ 390 (459)
++.+.. +..+.......+.+.+.+. ..+...++..|.+|++ .+..+.++.+...++|..++|.+.
T Consensus 104 l~~~~~------------~~~~~l~~~~~l~gig~g~-~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~ 170 (500)
T PRK09584 104 LVAWSG------------HDAGIVYMGMATIAVGNGL-FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLAT 170 (500)
T ss_pred HHHHhc------------ccHHHHHHHHHHHHHhhhc-ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 555421 1122222333334444443 3344457788998754 345678888999999999999999
Q ss_pred HHHHhhccchhHHHHHHHHHHHH
Q 012626 391 LTLLCSFKFGIFLFFAGWVTIMT 413 (459)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~l~~ 413 (459)
+++.+..+|...+...++..+++
T Consensus 171 g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 171 PWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHH
Confidence 99999889887776666544433
No 191
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.19 E-value=3.8e-10 Score=100.65 Aligned_cols=177 Identities=12% Similarity=0.000 Sum_probs=125.2
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHH
Q 012626 233 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV 312 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 312 (459)
.++...+.....++....+....+.+.+++|+|+.|.+++..+..+.+.+.++..|.+.||+|.|+....+.+...+-++
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~ 94 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCL 94 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHH
Confidence 34444555555555556666666666677999999999999999999999999999999999999999988888877777
Q ss_pred HHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 012626 313 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLT 392 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 392 (459)
.+.+... ..+.+..+....+.+. +.+...+....+++.+|++++|.++|+.. .+++|..+...+.+.
T Consensus 95 ~~~~a~~----------~~~~~~ll~~gll~G~--~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~ 161 (417)
T COG2223 95 GLAFAVT----------YPSTWQLLVIGLLLGL--AGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL 161 (417)
T ss_pred HHHHHcc----------CCchHHHHHHHHHHhc--ccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH
Confidence 7766531 1111222222222222 22333444688899999999999999999 999999999999999
Q ss_pred HHhhcc---chhHHHHHHHH-HHHHHhheeeccC
Q 012626 393 LLCSFK---FGIFLFFAGWV-TIMTIFVYFFLPE 422 (459)
Q Consensus 393 ~~~~~~---~~~~~~~~~~~-~l~~~~~~~~~~~ 422 (459)
+....+ |.....+..+. .+..+..++..++
T Consensus 162 v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 162 VAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 988887 54443333333 3334444444443
No 192
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.19 E-value=7.1e-10 Score=104.04 Aligned_cols=141 Identities=13% Similarity=-0.019 Sum_probs=111.1
Q ss_pred HHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc
Q 012626 249 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 328 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (459)
.......|.+.+++|++..+.++..+...++..++.++.|++.||+|||+++..+....+++.+...+.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a----------- 94 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY----------- 94 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC-----------
Confidence 445566788888899999999999999999999999999999999999999999999999888877764
Q ss_pred cchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHH
Q 012626 329 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF-KFGIFLF 404 (459)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~ 404 (459)
++.+..+..-.+.+.+.+.... ....++.+.+| ++|+.++|........|..+++.+.+.+.++. +|...+.
T Consensus 95 --~~~~~ll~~r~l~Gig~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~ 167 (393)
T PRK09705 95 --PQSALLLSSALLGGVGIGIIQA-VMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLA 167 (393)
T ss_pred --cchHHHHHHHHHHHhHHHHHhh-hhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 2233344445555555554443 33466778887 77999999999999999999999999888765 5654433
No 193
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.18 E-value=7.2e-11 Score=111.08 Aligned_cols=140 Identities=18% Similarity=0.093 Sum_probs=109.2
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHH--HHHHHH--HhHHHHHHHHHHHhhc
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGA--ALNAAA--ANLAMLLTGRILLGVG 96 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~--~~~~~~--~~~~~l~~~r~l~G~~ 96 (459)
.++++|.++.+.+...+...++..++.++.|+++||+|||+.+..+..+..+.. ....+. ++.+.+....++.|++
T Consensus 246 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 325 (394)
T TIGR00883 246 LTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALI 325 (394)
T ss_pred HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999999999998776555444333 222222 4667777888999999
Q ss_pred ccccchhhhHHHHhccCCCcchHHHHH-HHHHHHHHHHHHHHHhhhhhccccch-hHHHHHhhhHHHH
Q 012626 97 IGFGNQAVPLYLSEMAPTHLRGGLNMM-FQLATTLGIFTANMINYGTQKLETWG-WRLSLGLAAAPAL 162 (459)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~~~~~~~~g-wr~~f~~~~~~~~ 162 (459)
.+...+...+++.|.+|+++|+++.++ ...+..+|..++|.+ .+...+..| |++.++......+
T Consensus 326 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~--~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 326 GGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYI--AAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHH--HHHHHHHcCcchhHHHHHHHHHH
Confidence 888899999999999999999999998 456667888899988 455555556 8887777665544
No 194
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.16 E-value=8.2e-10 Score=104.09 Aligned_cols=170 Identities=13% Similarity=0.079 Sum_probs=117.1
Q ss_pred HHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----CCch-hhhhhhHHHHHHHHHH
Q 012626 241 MFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL-----GRRA-LLISGGIQMITCQVIV 314 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~-~~~~~~~~~~~~~~~~ 314 (459)
.+.+.........-.|.++++.|++.++.+++...... .+..++.|+++||+ |||| .+..+....+++...+
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 34444556677777899999999999999988665554 57889999999999 7776 5666666665555554
Q ss_pred HHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 315 SIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
.+.. +....+......++.. .......+...+++.|..|+++|+++.++......+|..+++.+.+.+.
T Consensus 86 ~~~~----------~~~~~~~l~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 86 AFCP----------PHAALWPLAGLAVLVA-FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred HhcC----------ccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 4321 1112222222223333 3333444555688899999999999999999988999999999999888
Q ss_pred hh-ccchhHHHHHHHHHHHHHhheeeccCC
Q 012626 395 CS-FKFGIFLFFAGWVTIMTIFVYFFLPET 423 (459)
Q Consensus 395 ~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~ 423 (459)
+. .+|...+.+.++..+...+..+..||+
T Consensus 155 ~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~ 184 (402)
T PRK11902 155 DRVLGWGNTYLLMAGLMLAGALTTLWAPEP 184 (402)
T ss_pred hcccCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 85 478777766665555554444455554
No 195
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.15 E-value=8.1e-08 Score=88.93 Aligned_cols=342 Identities=11% Similarity=0.019 Sum_probs=182.5
Q ss_pred HHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH--------H-------hHHHHHHHHHHHhhcc
Q 012626 33 AAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA--------A-------NLAMLLTGRILLGVGI 97 (459)
Q Consensus 33 ~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--------~-------~~~~l~~~r~l~G~~~ 97 (459)
+...-.-.+...++++..|.+.||..|.++...+.+..-++..+.+.. + ....+++.-.+.|.-.
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 333344445667888889999999999998877665544433332211 1 0112222222222211
Q ss_pred ccc-chhhhHHHHhcc------CCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc
Q 012626 98 GFG-NQAVPLYLSEMA------PTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 170 (459)
Q Consensus 98 ~~~-~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (459)
-.. .....+.=.||. +++.+.+..+...-.--+.-+++|++ .+......+.+....+.++..++..+.=++
T Consensus 121 ~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~--vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 121 RLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLF--VGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHH--HHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 111 111122223443 34455677777777777788999998 666666667888877777777766543222
Q ss_pred -c----CCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhh
Q 012626 171 -L----PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQIL 245 (459)
Q Consensus 171 -~----~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (459)
+ ...|. +..+++.++.+...+.. +..+............+.-+.....|+.-++++...+-+-..++.+.
T Consensus 199 ~l~~VY~~~P~-L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T--- 273 (432)
T PF06963_consen 199 LLARVYNSVPA-LAVKKRSSESESSSDEE-SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT--- 273 (432)
T ss_pred HHHHHHHhChH-hcCCCCCcccccccccc-ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH---
Confidence 1 22332 22222221111100000 00000001111111111122224455655555543333332222222
Q ss_pred cchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 246 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
...+......|+...|+++...+..-....+.++.|.++..++.+|+|..+.-.++......+..+....... +.
T Consensus 274 --VLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~---~~ 348 (432)
T PF06963_consen 274 --VLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWA---PG 348 (432)
T ss_pred --HhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhc---CC
Confidence 1222334455666779999999999999999999999999999999999888888777666555544433211 11
Q ss_pred ccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHH
Q 012626 326 QELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 387 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 387 (459)
.+.+.......+..+.+.-.+.- ++-....-++.|..|+++||+..|+-+...++...+.-
T Consensus 349 ~~~~~~s~~~l~~gi~~SR~GLW-~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 349 SPFSSISAYLLLGGIALSRIGLW-SFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred CCchhhHHHHHHHHHHHHHHHHH-hhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 00011122222222232222222 22223346678999999999999999999888775443
No 196
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.15 E-value=5.4e-10 Score=105.76 Aligned_cols=154 Identities=8% Similarity=0.071 Sum_probs=131.8
Q ss_pred CCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccch--hHHHHHHHHHHHHHHHHHH--------HHhHHHHHH
Q 012626 19 AHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRR--ASIICGGISFLLGAALNAA--------AANLAMLLT 88 (459)
Q Consensus 19 ~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr--~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~ 88 (459)
...++++|++..+...+.-...+...+|++++|++.||+|.| ++++.+++++.+..+...+ .++-+.+.+
T Consensus 306 i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~ 385 (477)
T PF11700_consen 306 IYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWV 385 (477)
T ss_pred HHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHH
Confidence 334668899999999999999999999999999999999999 8999888888666666555 577788999
Q ss_pred HHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHhhhHHHHHHHHH
Q 012626 89 GRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVG 167 (459)
Q Consensus 89 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~-~gwr~~f~~~~~~~~~~~~~ 167 (459)
.-++.|+..|+..+.+.++.+|+.|+++.+..+|++....-....+||++. +...+. .+-|+.+....++.++.+++
T Consensus 386 ~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~--g~i~~~tg~~r~g~~~l~~lf~~gl~l 463 (477)
T PF11700_consen 386 LAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF--GLITDATGSQRYGFLFLLVLFLIGLIL 463 (477)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999984 443333 24788888888888887777
Q ss_pred HhccCCC
Q 012626 168 GILLPET 174 (459)
Q Consensus 168 ~~~~~e~ 174 (459)
.++++..
T Consensus 464 l~~v~~~ 470 (477)
T PF11700_consen 464 LFFVDVE 470 (477)
T ss_pred Hhhccch
Confidence 7776543
No 197
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.15 E-value=3.3e-10 Score=108.40 Aligned_cols=146 Identities=15% Similarity=0.220 Sum_probs=131.2
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccc
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFG 100 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 100 (459)
.++++|.+....|++.+++.+|..+++++.+++.+|+++++++..+.++++++.+..+++++.+..++.-++.|++....
T Consensus 245 a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~ 324 (524)
T PF05977_consen 245 ARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIA 324 (524)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred chhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH
Q 012626 101 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG 168 (459)
Q Consensus 101 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~ 168 (459)
.+...+.+.+..|++.|||+++++.+....+..+|..+ ++...+..|-+..+.+.++..++..++.
T Consensus 325 ~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll--~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 325 NSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLL--WGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999998 6777777788888888776655544433
No 198
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.15 E-value=2.3e-10 Score=104.64 Aligned_cols=152 Identities=13% Similarity=0.061 Sum_probs=117.2
Q ss_pred HHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc
Q 012626 249 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 328 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (459)
..+.+++--.+++.+-.+.-.|........+.++.-++.+++.+|+|+-+++..++.+..+-++.+...
T Consensus 388 ~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L----------- 456 (618)
T KOG3762|consen 388 GLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL----------- 456 (618)
T ss_pred HHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh-----------
Confidence 333444434567777777777888888889999999999999999999999988888777776666654
Q ss_pred cchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHH-HHHHHHHHHHHHHHHhhccchhHHHHHH
Q 012626 329 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVN-LFFTFVIAQIFLTLLCSFKFGIFLFFAG 407 (459)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (459)
.++|..+..-.+-+...+..+..+. +|++...||+.+.++.++..... .+|-.+|+.++|.+.+.++-...+-..+
T Consensus 457 --~n~W~vLPieilqgit~aliWaa~~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~g 533 (618)
T KOG3762|consen 457 --QNPWMVLPIEILQGITHALIWAAII-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFG 533 (618)
T ss_pred --cCchheeeHHHHHHHHHHHHHHHHH-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHH
Confidence 4567777777788888888887774 89999999999999999988764 5888899999999988888655554444
Q ss_pred HHHHHHH
Q 012626 408 WVTIMTI 414 (459)
Q Consensus 408 ~~~l~~~ 414 (459)
+.+++.+
T Consensus 534 iAcl~~l 540 (618)
T KOG3762|consen 534 IACLVTL 540 (618)
T ss_pred HHHHHHH
Confidence 4444333
No 199
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.13 E-value=7.5e-10 Score=103.58 Aligned_cols=141 Identities=16% Similarity=0.080 Sum_probs=118.2
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchh
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 103 (459)
|.|.++.+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..++.|++.+...+.
T Consensus 234 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 313 (382)
T PRK11128 234 AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLA 313 (382)
T ss_pred HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999998888888999999999999999999988888
Q ss_pred hhHHHHhccCCCcchHHHHHHH-HHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH
Q 012626 104 VPLYLSEMAPTHLRGGLNMMFQ-LATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG 168 (459)
Q Consensus 104 ~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~ 168 (459)
...++.+. +++++++..+... ...++|..+||.+ ++...+..|+ ..++..+++.++.++..
T Consensus 314 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i--~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T PRK11128 314 AMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVL--SGFLYQHLGA-GVFWVMALVALPALFIR 375 (382)
T ss_pred HHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 88888887 5666788888886 5567888899999 5666666677 46666666665554433
No 200
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.13 E-value=5.9e-11 Score=106.71 Aligned_cols=177 Identities=10% Similarity=-0.002 Sum_probs=129.3
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHH
Q 012626 237 IFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSI 316 (459)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 316 (459)
..+.......--+.+....+..-+.+|.++...|++.....+..++..+++|++.||++|++++..+..+..++.+...+
T Consensus 38 l~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~f 117 (493)
T KOG1330|consen 38 LCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGF 117 (493)
T ss_pred HHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHH
Confidence 33333434333444444445555558999999999999999999999999999999999999999998888888777666
Q ss_pred HHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 317 ILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 396 (459)
.. ..|...+.-.+.+.+-+ .+.|+..++++|.+|.++|+++.++.+....+|..+|-.+...+.+.
T Consensus 118 s~-------------~Fwq~~l~R~~vGiGeA-s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 118 SN-------------HFWQVLLCRGFVGIGEA-SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HH-------------HHHHHHHHHHHhccchh-hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 42 23334444444455544 66777789999999999999999999999999998888888877776
Q ss_pred cc-chhHHHHHHHH-HHHHHhheeeccCCCCCC
Q 012626 397 FK-FGIFLFFAGWV-TIMTIFVYFFLPETKGVP 427 (459)
Q Consensus 397 ~~-~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~ 427 (459)
.+ |...+...+++ .+++++..++.+|.+++.
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga 216 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA 216 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCccccc
Confidence 66 65555554444 445555556666665543
No 201
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.12 E-value=6.2e-10 Score=109.85 Aligned_cols=156 Identities=13% Similarity=-0.062 Sum_probs=111.5
Q ss_pred HHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHh
Q 012626 240 PMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 319 (459)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (459)
..+.............+.+.++++++..+.|++.+...++..++.++.+++.||.+||+.+.++.++.+++.++..+...
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf 120 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHF 120 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHH
Confidence 34444433445555566777779999999999999999999999999999999999999999999999888887765421
Q ss_pred hc--cCCC-------------------c-------------cc-cc--hhhh-HHHHHHHHHHHHHhhcccccccccccc
Q 012626 320 LK--FGPN-------------------Q-------------EL-SK--SFSI-LVVVVICLFVLAFGWSWGPLGWTVPSE 361 (459)
Q Consensus 320 ~~--~~~~-------------------~-------------~~-~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (459)
.. +... . .. .. ...+ ..++.-++.+.+.+ ...++..+++.|
T Consensus 121 ~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~-~~~~~~~~~i~d 199 (633)
T TIGR00805 121 LSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT-PIFPLGISYIDD 199 (633)
T ss_pred hcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC-cchhcCchhhhc
Confidence 10 0000 0 00 00 0112 22233334444433 344556789999
Q ss_pred cCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 362 IFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 362 ~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 396 (459)
.+|+++|+...|+.+....+|..+++.+.+.+.+.
T Consensus 200 ~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 200 FAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred cCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999988754
No 202
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.12 E-value=4e-09 Score=100.37 Aligned_cols=178 Identities=11% Similarity=0.005 Sum_probs=108.7
Q ss_pred HHHHhhhcchHHHHHhHHHHHHhcC---CCCch---hHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHH
Q 012626 239 MPMFQILTGINSILFYAPVLFQSMG---FKGDA---SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV 312 (459)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 312 (459)
+..+........+....|.+.++++ .+..+ .+.......++..+++++.|+++||+|||+.+..+.....++.+
T Consensus 29 ~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 29 SGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 3344444444556666677767654 33333 23344455556669999999999999999999998888887777
Q ss_pred HHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 012626 313 IVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLT 392 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~ 392 (459)
...+..... ..........+..-++.+.+.+.. .+...++++|.+|+++|+...++.......|..+++.+...
T Consensus 109 ~~~~~~~~~-----~~~~~~~~~l~~~R~l~G~g~g~~-~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~ 182 (432)
T PRK10406 109 VIACLPGYE-----TIGTWAPALLLLARLFQGLSVGGE-YGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVV 182 (432)
T ss_pred HHhhcCCch-----hHHHHHHHHHHHHHHHHHhhhhhh-HhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665431000 000001112333334444444433 34456888999999999999998877777777777665544
Q ss_pred HH--------hhccchhHHHHHHHHHHHHHhheeeccC
Q 012626 393 LL--------CSFKFGIFLFFAGWVTIMTIFVYFFLPE 422 (459)
Q Consensus 393 ~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 422 (459)
+. +..+|...+.+.++..++........||
T Consensus 183 ~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e 220 (432)
T PRK10406 183 LQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDE 220 (432)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33 2467877777666655554444333444
No 203
>TIGR00898 2A0119 cation transport protein.
Probab=99.11 E-value=4e-10 Score=109.72 Aligned_cols=153 Identities=10% Similarity=0.125 Sum_probs=110.5
Q ss_pred hHHHHHHhcCCC---CchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc
Q 012626 254 YAPVLFQSMGFK---GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 330 (459)
Q Consensus 254 ~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (459)
+.+.+.++++++ ..+.++..+...++.+++.++.|+++||+|||+.+..+.....++.++..+.
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~------------- 177 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS------------- 177 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc-------------
Confidence 345555668887 7888999999999999999999999999999999988887777766655443
Q ss_pred hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 012626 331 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVT 410 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (459)
.+.+..++.-.+.+.+.+ ...+....++.|.+|++.|+.+.++......+|..+++.+...+.+ |...+...++..
T Consensus 178 ~~~~~~~~~r~l~G~~~~-~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~ 253 (505)
T TIGR00898 178 PNYTVFLVFRLLVGMGIG-GIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPT 253 (505)
T ss_pred ccHHHHHHHHHHHHhhcc-chHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHH
Confidence 223333344444444444 3344557888999999999999999988888888888877665543 555555555555
Q ss_pred HHHHhheeeccCC
Q 012626 411 IMTIFVYFFLPET 423 (459)
Q Consensus 411 l~~~~~~~~~~~~ 423 (459)
++..+..+++||+
T Consensus 254 ~~~~~~~~~~~es 266 (505)
T TIGR00898 254 FLFFLLSWFVPES 266 (505)
T ss_pred HHHHHHHHhcCCC
Confidence 5555555667765
No 204
>PRK15075 citrate-proton symporter; Provisional
Probab=99.10 E-value=2.1e-09 Score=102.29 Aligned_cols=168 Identities=15% Similarity=0.118 Sum_probs=107.8
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHH-HHHH-----HHHHHHHHHHHHHHHHhhCCchhhhhhhHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYS-SAMT-----GAVLASSTLISIATVDKLGRRALLISGGIQM 307 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-----~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 307 (459)
....++..+........+....|.+.++++.++.+.+.. .+.. .+...++.++.|++.||+|||+.+..+....
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~ 96 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIM 96 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHH
Confidence 445555666666666778888898888888877664332 2211 2223467889999999999999999988887
Q ss_pred HHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHH
Q 012626 308 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 387 (459)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 387 (459)
.++.++..+..... ..........++.-++.+.+.+...... ..+++|.+|+++|+++.++.....+++..+++
T Consensus 97 ~~~~~l~~~~~~~~-----~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 97 ASGTLLIAFVPGYA-----TIGLAAPLLVLLGRLLQGFSAGVELGGV-SVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHhCCcHH-----HHHHHHHHHHHHHHHHhhccccccHHHH-HHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 77776665431000 0000000112223333444443333333 47889999999999999999998888888877
Q ss_pred HHHHHHH--------hhccchhHHHHHH
Q 012626 388 QIFLTLL--------CSFKFGIFLFFAG 407 (459)
Q Consensus 388 ~~~~~~~--------~~~~~~~~~~~~~ 407 (459)
.+.+.+. +..+|...+.+..
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHH
Confidence 7766653 4567776666543
No 205
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.10 E-value=6.2e-10 Score=97.53 Aligned_cols=116 Identities=12% Similarity=-0.003 Sum_probs=91.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHH
Q 012626 265 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFV 344 (459)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
+..-+|++.+.+++...+.++..|.++||+|||.++.++....++..++.+... ....++..=+.+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--------------~F~afv~aR~l~ 131 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--------------NFAAFVLARFLG 131 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHhh
Confidence 445678899999999999999999999999999999999888888666655431 222333323333
Q ss_pred HHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 345 LAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
+.+.... .+..++++|++++++|+.+++..+....+|.++||.++|++..
T Consensus 132 Gi~kgnl-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 132 GIFKGNL-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhccCch-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 4444333 3457999999999999999999999999999999999999877
No 206
>PRK10133 L-fucose transporter; Provisional
Probab=99.09 E-value=6.2e-09 Score=98.85 Aligned_cols=146 Identities=11% Similarity=-0.029 Sum_probs=108.4
Q ss_pred HHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHH
Q 012626 238 FMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 317 (459)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (459)
.+.++.............|.+.+++|.++.+.++......++..++.++.|++.||+|||+.+..+.....++.++....
T Consensus 32 ~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~ 111 (438)
T PRK10133 32 CSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPA 111 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444445667777888877899999999999999999999999999999999999999999998888887665322
Q ss_pred HhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 318 LGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
.. .++.+..+...++.+.+.+...... ..++.|..|++.|...+++.+....+|..+++.+.+.+.
T Consensus 112 ~~----------a~~~~~ll~~r~l~G~g~g~~~~~~-~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 112 AE----------IMNYTLFLVGLFIIAAGLGCLETAA-NPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred Hh----------cCCHHHHHHHHHHHHHHHHHHHhhH-HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 1223344445555566656554444 466667777776667899999999999999998877654
No 207
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.09 E-value=1e-09 Score=93.54 Aligned_cols=155 Identities=15% Similarity=0.100 Sum_probs=120.2
Q ss_pred cCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH-------HhHHHHHHH
Q 012626 17 KHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-------ANLAMLLTG 89 (459)
Q Consensus 17 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~ 89 (459)
-.+++++.+|+|.+|...+.+...+|..++ ++.|.+.|++|+|.++.+|.+...+|..+..++ .++|.+.+.
T Consensus 24 yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~ 102 (250)
T PF06813_consen 24 YSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLF 102 (250)
T ss_pred hhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHH
Confidence 345567889999999999999999999875 889999999999999999999999999887665 367888888
Q ss_pred HHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHh
Q 012626 90 RILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI 169 (459)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~ 169 (459)
.++.|.+.+....++.....+.+| ++||.+.++.-...+++..+-..+.... .++..-+..+++...+.++.++..+
T Consensus 103 ~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~--f~~~~~~fll~la~~~~~v~l~~~~ 179 (250)
T PF06813_consen 103 LFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAF--FGDDPSSFLLFLAVLPAVVCLVAMF 179 (250)
T ss_pred HHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHH--cCCChHHHHHHHHHHHHHHHHHHhh
Confidence 889988877777777777788997 5799999999999999988877663333 3332344455555555555555555
Q ss_pred ccCCCh
Q 012626 170 LLPETP 175 (459)
Q Consensus 170 ~~~e~p 175 (459)
++++.|
T Consensus 180 ~vr~~~ 185 (250)
T PF06813_consen 180 FVRPVP 185 (250)
T ss_pred heeccC
Confidence 554433
No 208
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.08 E-value=1.1e-09 Score=103.00 Aligned_cols=141 Identities=13% Similarity=0.169 Sum_probs=118.1
Q ss_pred ccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhh
Q 012626 26 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 105 (459)
Q Consensus 26 ~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 105 (459)
+.+....|.+.+...+...++.++.|++.||+|||+.+.++.++.+++..+...+++.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667789999999999999999999999999999999999999998888878888999999999999998776666666
Q ss_pred HHHHhccCCCcchHHHHH-HHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHH
Q 012626 106 LYLSEMAPTHLRGGLNMM-FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGG 168 (459)
Q Consensus 106 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~ 168 (459)
.++.+..+++.++...+. .+....+|.++++.+ .+...+..||+..|.+.++..++..+..
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l--~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTL--AGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHh--HHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 777888888877776665 667889999999999 6666666799999999888877665543
No 209
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.07 E-value=2.8e-09 Score=98.78 Aligned_cols=162 Identities=15% Similarity=0.131 Sum_probs=107.0
Q ss_pred HHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----CCchhh-hhhhHHHHHHHHHHHHHHhhcc
Q 012626 249 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL-----GRRALL-ISGGIQMITCQVIVSIILGLKF 322 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 322 (459)
.......|.+.++.|++..+.+..... .+...+ .++.|+++||+ ||||.+ ..+....++....+.+..
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~---- 78 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV---- 78 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC----
Confidence 344556788889999999999988654 444444 88999999998 788875 444444444433333220
Q ss_pred CCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc----
Q 012626 323 GPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK---- 398 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~---- 398 (459)
+....+.......+...+.+ ...+...+++.|.+|+++|+.+.++......+|..+++.+.+.+.+..+
T Consensus 79 ------~~~~l~~l~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~ 151 (356)
T TIGR00901 79 ------PSTDLPLLAGLAFLIAFFSA-TQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTG 151 (356)
T ss_pred ------cchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 11112222222223332222 3344446788999999999999999999999999999999999888877
Q ss_pred ----chhHHHHHHHHHHHHHhhee-eccCC
Q 012626 399 ----FGIFLFFAGWVTIMTIFVYF-FLPET 423 (459)
Q Consensus 399 ----~~~~~~~~~~~~l~~~~~~~-~~~~~ 423 (459)
|...+.+.+++.+...+..+ ..||+
T Consensus 152 ~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 152 LITLWGYIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 77777777666665554433 34554
No 210
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.07 E-value=6.6e-08 Score=94.89 Aligned_cols=146 Identities=15% Similarity=0.199 Sum_probs=116.9
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhh-ccchhHHHHHHHHHHHHHHHHHHHHh--------HHHHHHHHHHHh
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD-YGRRASIICGGISFLLGAALNAAAAN--------LAMLLTGRILLG 94 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G 94 (459)
.+|.+.+....+...+....-+..+++|.++|+ +||++.+.++.++..++.++.+++.. ....+++-.+..
T Consensus 17 ~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia 96 (654)
T TIGR00926 17 FLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIA 96 (654)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHH
Confidence 468888888888888888888999999999997 59999999999999999988876521 234667788899
Q ss_pred hcccccchhhhHHHHhccCCC---cchHHHHHHHHHHHHHHHHHHHHhhhhhcc-----ccchhHHHHHhhhHHHHHHHH
Q 012626 95 VGIGFGNQAVPLYLSEMAPTH---LRGGLNMMFQLATTLGIFTANMINYGTQKL-----ETWGWRLSLGLAAAPALMMTV 166 (459)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~-----~~~gwr~~f~~~~~~~~~~~~ 166 (459)
+|.|+.-+...+...|.++++ +|...+.++..+.++|..+++++....... ...+|...|.+.++..++.++
T Consensus 97 ~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~l 176 (654)
T TIGR00926 97 LGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALI 176 (654)
T ss_pred hhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999754 366788888999999999988773322211 124699999998888877765
Q ss_pred HHh
Q 012626 167 GGI 169 (459)
Q Consensus 167 ~~~ 169 (459)
+..
T Consensus 177 vf~ 179 (654)
T TIGR00926 177 VFM 179 (654)
T ss_pred HHH
Confidence 543
No 211
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.07 E-value=8.8e-10 Score=87.03 Aligned_cols=134 Identities=16% Similarity=0.182 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccc
Q 012626 274 AMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGP 353 (459)
Q Consensus 274 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (459)
....++.+++.+..+++.||++||+.+..+.....++.+..... ++.+.......+.+.+.+.. .+
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~-~~ 70 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------------SNITVLIIARFLQGFGAAFA-LV 70 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------------ccHHHHHHHHHHHHHHHHHH-HH
Confidence 34567788889999999999999999888777766665554432 12233333444444444433 34
Q ss_pred cccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH-HHhheeecc
Q 012626 354 LGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIM-TIFVYFFLP 421 (459)
Q Consensus 354 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~ 421 (459)
....+..|.+|+++|+++.++.+....++..+++.+.+.+.+..++...+.......+. .+..+...|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 71 AGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 44677889999999999999999999999999999999998887775555544444333 333433333
No 212
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.07 E-value=2.9e-09 Score=101.72 Aligned_cols=113 Identities=21% Similarity=0.271 Sum_probs=97.0
Q ss_pred CchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHhhcccccchhhhH
Q 012626 28 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-ANLAMLLTGRILLGVGIGFGNQAVPL 106 (459)
Q Consensus 28 s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 106 (459)
++.+.+++.+...++..++.+++++++||+|||+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888899999999999999999999999999998888887777665 46677788889999999998899999
Q ss_pred HHHhccC-------CCcchHHHHHHHHHHHHHHHHHHHHhh
Q 012626 107 YLSEMAP-------THLRGGLNMMFQLATTLGIFTANMINY 140 (459)
Q Consensus 107 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~ 140 (459)
+++|..+ ++++|.+.++.+....+|..+++.+..
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998865 456799999999999999999988843
No 213
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.06 E-value=5.4e-09 Score=111.91 Aligned_cols=190 Identities=12% Similarity=0.087 Sum_probs=118.3
Q ss_pred HHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh-cCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhh
Q 012626 223 NILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS-MGFK-GDASLYSSAMTGAVLASSTLISIATVDKLGRRALL 300 (459)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 300 (459)
++++++..+++++..++..+........+..+..+.+.. .+.+ ....++..+...+..++..+++|+++||++||+++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 355555555555555444443332222223232222222 2221 23456677778888899999999999999999976
Q ss_pred hhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHH
Q 012626 301 ISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL 380 (459)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 380 (459)
........+.......... ..+.+..++..++.+.+.+ .+.|...+++.+.+|+++++.++|+.++...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~----------~~s~~~l~~~~~l~gi~~a-~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ 154 (1140)
T PRK06814 86 KILKFAEIGIAALAIYGFH----------LNSVPLLFAALFLMGIHSA-LFGPIKYSILPDHLNKDELLGANALVEAGTF 154 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHH----------HhhHHHHHHHHHHHHHHHH-hhchHHHHhhHhhcCccccchhhHHHHHHHH
Confidence 4422222222221111110 1223444444444444444 4456667888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhheeeccCC
Q 012626 381 FFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPET 423 (459)
Q Consensus 381 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 423 (459)
+|..++|.+.|.+.+..++...+...++..+.++++.+.++++
T Consensus 155 ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 155 IAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 9999999999999998888777755555556666665666554
No 214
>PTZ00207 hypothetical protein; Provisional
Probab=99.04 E-value=5.8e-09 Score=100.42 Aligned_cols=163 Identities=12% Similarity=0.115 Sum_probs=104.5
Q ss_pred hHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcc
Q 012626 248 INSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQE 327 (459)
Q Consensus 248 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (459)
.+.+..+.+.+.+++|++..+.+....... ......++.|++.||+|+|+++.++.+...++.++..+.... .
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~------~ 115 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQE------V 115 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcc------c
Confidence 356667788888889999998888776533 334566678999999999999999999998888877764210 0
Q ss_pred ccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccch-hHHHHH
Q 012626 328 LSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFG-IFLFFA 406 (459)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 406 (459)
. ..+.+...+..++.+.+.+...... ...+.+.+| ++||.+.|+......+|+++.+.+...+... ++. .+++.+
T Consensus 116 i-~~s~~~l~l~r~l~G~G~~~~~~~~-~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-~~~~~fl~l~ 191 (591)
T PTZ00207 116 I-EGSVVRLSVYNGLMTLGCMLFDLGA-VVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-NTSAYFFFLM 191 (591)
T ss_pred c-cCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHH
Confidence 0 0123333333444444443332223 345567887 7799999999999999998755555544432 233 334444
Q ss_pred HHHHHHHHhheeecc
Q 012626 407 GWVTIMTIFVYFFLP 421 (459)
Q Consensus 407 ~~~~l~~~~~~~~~~ 421 (459)
.+..+++++.+.+++
T Consensus 192 vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 192 SFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHhhee
Confidence 444444444444444
No 215
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.03 E-value=3.3e-09 Score=99.59 Aligned_cols=143 Identities=14% Similarity=-0.003 Sum_probs=109.1
Q ss_pred CccccCchhHHHHHHhHHH-HHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH------HhHHHHHHHHHHHhh
Q 012626 23 NYCKYDNQGLAAFTSSLYL-AGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA------ANLAMLLTGRILLGV 95 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~l~G~ 95 (459)
+|.|++++++|++...... ...++.++.|++.||+|+|+.+..+.++.++..+..... ++...+.....+.++
T Consensus 236 ~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (390)
T TIGR02718 236 VDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSL 315 (390)
T ss_pred HhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHH
Confidence 3479999999999888764 666778999999999999999988777664433332211 233344555566677
Q ss_pred cccccchhhhHHHHhccCC-CcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHH
Q 012626 96 GIGFGNQAVPLYLSEMAPT-HLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVG 167 (459)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~ 167 (459)
+.+...+...+.+.+..++ +++++.+++.+...++|..+||.+ .+...+..||+..|++.+++.++..+.
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~--~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 316 ITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSI--AGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 7777778888888888776 889999999999999999999999 556666678999999888777665543
No 216
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.01 E-value=2.2e-09 Score=95.93 Aligned_cols=152 Identities=11% Similarity=0.112 Sum_probs=129.6
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccc
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 101 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 101 (459)
.+++|++..++.++.-...+..+++++++|++.||+|.|+++..++++..+.++..-+...-..+.+.-.+.|...|+.+
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 45789999999999999999999999999999999999999999999999999888777776677777899999999999
Q ss_pred hhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCC
Q 012626 102 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPET 174 (459)
Q Consensus 102 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~ 174 (459)
..+.++..+..|++|-++.+|++....-.+..+||.+........ .+-|..+....++..+.++..+.+|+.
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT-g~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT-GSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999999999843333222 246777777666666666666666653
No 217
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.01 E-value=6.1e-09 Score=96.49 Aligned_cols=143 Identities=10% Similarity=-0.015 Sum_probs=102.8
Q ss_pred HHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc
Q 012626 249 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 328 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (459)
.......|.+.+++|.+..+.++..+...++..++.++.|++.||+|||+.+..+.....++.+.. ..
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~----------- 84 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA----------- 84 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh-----------
Confidence 344556788888999999999999999999999999999999999999999888776655554433 11
Q ss_pred cchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc--chhHHHHH
Q 012626 329 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK--FGIFLFFA 406 (459)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~ 406 (459)
++.+..+...++.+.+.+..... ....+.|.+| ++|+++.++.+....+|..+++.+.+.+.+..+ |...+...
T Consensus 85 --~~~~~l~~~~~~~g~g~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~ 160 (355)
T TIGR00896 85 --PGTALLFAGTALIGVGIAIINVL-LPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWW 160 (355)
T ss_pred --ccHHHHHHHHHHHHHHHHHHhcc-chHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 12233333344444444433322 2355667776 679999999999999999999999988877653 44444333
Q ss_pred H
Q 012626 407 G 407 (459)
Q Consensus 407 ~ 407 (459)
+
T Consensus 161 ~ 161 (355)
T TIGR00896 161 A 161 (355)
T ss_pred H
Confidence 3
No 218
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.00 E-value=2.7e-08 Score=93.76 Aligned_cols=178 Identities=13% Similarity=0.052 Sum_probs=112.3
Q ss_pred cchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHH----hhCCchhhhhh-hHHHHHHHHHHHHHHhh
Q 012626 246 TGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVD----KLGRRALLISG-GIQMITCQVIVSIILGL 320 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 320 (459)
..+.....+.+.++++.|.++...+.......+..++..++.|+++| |+|||+.++.. .....++..++......
T Consensus 18 ~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~ 97 (477)
T TIGR01301 18 FGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADI 97 (477)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchh
Confidence 34566667777788889999999999999999999999999999999 59999998765 33333433433332100
Q ss_pred c--cCCCccccchhh--hHHHHHHHHHHHHHhhcccccccccccccCChhhh--hhhhHHHHHHHHHHHHHHHHHHHHH-
Q 012626 321 K--FGPNQELSKSFS--ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETR--SAGQSITVAVNLFFTFVIAQIFLTL- 393 (459)
Q Consensus 321 ~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~g~~~~~~~~g~~~~~~~~~~~- 393 (459)
. ..+......... +..+....+..........|. .++++|..|+++| +.+.++.+....+|+.+++.+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~ 176 (477)
T TIGR01301 98 GHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSG 176 (477)
T ss_pred hhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 000000000001 122223333344445444555 5888999998865 5799999999999999999888764
Q ss_pred -Hhhc-------------cchhHHHHHHH-HHHHHHhheeeccCCC
Q 012626 394 -LCSF-------------KFGIFLFFAGW-VTIMTIFVYFFLPETK 424 (459)
Q Consensus 394 -~~~~-------------~~~~~~~~~~~-~~l~~~~~~~~~~~~~ 424 (459)
.+.. +....+.+.++ +.+...+..+..+|..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 177 LYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 2211 22334444444 4444555566677754
No 219
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.97 E-value=4e-09 Score=113.25 Aligned_cols=142 Identities=15% Similarity=0.070 Sum_probs=119.0
Q ss_pred CCCccccCch-hHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccc
Q 012626 21 ENNYCKYDNQ-GLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGF 99 (459)
Q Consensus 21 ~~~~~~~s~~-~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 99 (459)
.++.+|.+.. +.+++.+...++..++.++.|+++||+++|+++.++.++.+++.++..+..+.+.+++..++.|++.+.
T Consensus 259 ~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 338 (1146)
T PRK08633 259 AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGL 338 (1146)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3456788888 999999999999999999999999999999999999998888888888888999999999999999999
Q ss_pred cchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHH
Q 012626 100 GNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALM 163 (459)
Q Consensus 100 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~ 163 (459)
..+...+++.+..|+++|++++++.+....+|.++++.++..... ...++...+++.+.+.++
T Consensus 339 ~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 339 FIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred hhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999998887776432221 224566666665554443
No 220
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.92 E-value=2.9e-08 Score=93.46 Aligned_cols=147 Identities=14% Similarity=0.105 Sum_probs=119.2
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHH
Q 012626 261 SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 340 (459)
Q Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (459)
++.++..+.+++......+.+++.+.+|++.||+|.|+++..+.++.+++.++..+... ...+..++.=
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~-----------~~~~~~~~~R 135 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS-----------IGFYLLLVLR 135 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-----------hcchhhHHHH
Confidence 37788889999999999999999999999999999999999999999988888887642 2223445555
Q ss_pred HHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHHHHHhheee
Q 012626 341 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS-FKFGIFLFFAGWVTIMTIFVYFF 419 (459)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~ 419 (459)
++.+.+.+..+..+ ..+.++-.|+++|++..++.....++|.+++-++.|.+.+. .||...+++.+...++..+++++
T Consensus 136 ~lqGl~~g~~~pa~-~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 136 FLQGLGQGVLFPAI-GSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFL 214 (466)
T ss_pred HHhHHHHhHHHhhh-hceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 66676777666555 57778999999999999999999999999999999999998 88877777666655544444433
No 221
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.92 E-value=1.9e-08 Score=87.01 Aligned_cols=343 Identities=10% Similarity=0.020 Sum_probs=200.2
Q ss_pred CccccCchhHH-HHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccc
Q 012626 23 NYCKYDNQGLA-AFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGN 101 (459)
Q Consensus 23 ~~~~~s~~~~~-~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 101 (459)
.+.|++..++. -+.-...-.+.+.-.+.=.+.|..-.|++++.-.+.......+.-+.++.+.+=+.-++.|...+. .
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa-E 112 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA-E 112 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHH-H
Confidence 45566766554 223333444555556666788999899999988888888888888999999999999999998764 4
Q ss_pred hhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCChHHHHhh
Q 012626 102 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETPNSLIER 181 (459)
Q Consensus 102 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~ 181 (459)
.+-++++-+..+++++.++.+...+..-.|...|..++-.....+..+++..-.+......+.....+++|..+|.+.-+
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~ 192 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFH 192 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhh
Confidence 78899999999999999999999999888888888875555555555666666666665566666777888776555443
Q ss_pred CcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHh
Q 012626 182 GKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQS 261 (459)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (459)
++.++.. ..+..+.+. ..+..+..+ .........+.+..+++ .+....+.+....+++.-...|...+-++
T Consensus 193 ~~~~~~~--v~~~e~~~~-~~~~~~~l~--~~~~~l~~~l~~~y~np----~ll~WSlWwAl~scg~~QV~nY~Q~LW~~ 263 (433)
T KOG3810|consen 193 RLEDKIS--VGDLEEMNP-QASYMSYLR--GAFVLLWRDLQECYSNP----RLLKWSLWWALASCGYYQVTNYTQILWKE 263 (433)
T ss_pred cccccce--eccchhcCc-cchhhHHHH--HHHHHHHHHHHHHhcCc----hhhhhHHHHHHhhchhHHHHHHHHHHHHh
Confidence 3333211 111111111 000000000 00000011122222333 23444455555566667777776666665
Q ss_pred cCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHH
Q 012626 262 MGFKG--DASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVV 339 (459)
Q Consensus 262 ~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (459)
..-++ .-.|..-.+..+.+.++.+..|++.-++.|+.-+.++......+.+++... ..+..|.....
T Consensus 264 ~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~-----------~t~~Iw~~Ya~ 332 (433)
T KOG3810|consen 264 VAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA-----------QTQHIWVCYAG 332 (433)
T ss_pred hCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh-----------cccceehhhhh
Confidence 43111 122445556666777777888888666666533333322222222222221 12334555555
Q ss_pred HHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHH
Q 012626 340 ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIA 387 (459)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 387 (459)
..++...+....... ...+++....+.-|...|+..++.-+-..+..
T Consensus 333 yvlfr~~y~l~itiA-~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT 379 (433)
T KOG3810|consen 333 YVLFRVIYQLTITIA-TFQIARNLSSELFGLVFGINTFVALILQSILT 379 (433)
T ss_pred HHHHHhhHhhhhhHH-HHHHHHhhhhhhheeeeehHHHHHHHHHHhhe
Confidence 555555555443332 33444555667778888887776655444433
No 222
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.91 E-value=8.8e-06 Score=76.54 Aligned_cols=123 Identities=7% Similarity=-0.052 Sum_probs=92.3
Q ss_pred CCCCCcccc-----CchhHHHHHHhHHHHHHHh-hhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH----H-------
Q 012626 19 AHENNYCKY-----DNQGLAAFTSSLYLAGLVA-SFVASPVTRDYGRRASIICGGISFLLGAALNAAA----A------- 81 (459)
Q Consensus 19 ~~~~~~~~~-----s~~~~~~~~s~~~l~~~i~-~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----~------- 81 (459)
.+++|.+.+ +.+.+.++-+...+..++. .++.+++++|++|++++-.....+....+++++. +
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 345666655 3367889998888877766 8999999999999999888777777766666554 1
Q ss_pred --------------------hHHHHHHHHHHHhhcccccch-hhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhh
Q 012626 82 --------------------NLAMLLTGRILLGVGIGFGNQ-AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINY 140 (459)
Q Consensus 82 --------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 140 (459)
+.|...+.-+...+-.....+ .-.++++|.++.+|-.|..++++.+.++|.++++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444555555455554 67889999999999999999999999999999997744
Q ss_pred h
Q 012626 141 G 141 (459)
Q Consensus 141 ~ 141 (459)
.
T Consensus 187 ~ 187 (472)
T TIGR00769 187 Y 187 (472)
T ss_pred H
Confidence 3
No 223
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.91 E-value=2.2e-08 Score=93.41 Aligned_cols=145 Identities=16% Similarity=0.110 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhh
Q 012626 270 LYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGW 349 (459)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (459)
+...+...+++++|++..++++||+|||..+....+...++.++...... .+.....++.-++.+...+.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~----------~~~~e~li~GR~i~Gl~~gl 132 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS----------APSFEMLILGRLIVGLACGL 132 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH----------hhhHHHHHHHHHHHHHHhHH
Confidence 55677888999999999999999999999988888877777777665532 13344455555566656665
Q ss_pred cccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHH-HHHHhhc-cchhHHHHHHHHHHHHHhheeeccCCCC
Q 012626 350 SWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIF-LTLLCSF-KFGIFLFFAGWVTIMTIFVYFFLPETKG 425 (459)
Q Consensus 350 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 425 (459)
..... ..++.|..|.+.||....+......+|..++..+. ..+..+. .|...+.+..+..++..+...++||..+
T Consensus 133 ~~~~~-pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk 209 (485)
T KOG0569|consen 133 STGLV-PMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPK 209 (485)
T ss_pred HHHHH-HHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 55555 47889999999999998888888888887775544 3333322 3666666666777777777888888643
No 224
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.88 E-value=2e-07 Score=84.69 Aligned_cols=136 Identities=14% Similarity=0.071 Sum_probs=96.2
Q ss_pred HHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHHhc
Q 012626 32 LAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEM 111 (459)
Q Consensus 32 ~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 111 (459)
.+.+.-+-.+...+..+.+.++.+|+..+.=.....+++.++.++.++++|.+.-+++-.+.+++.|........+.. .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 344555555666677777788889887544455666678889999999999999999999999999988888777654 5
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc-cCC
Q 012626 112 APTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPE 173 (459)
Q Consensus 112 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~-~~e 173 (459)
+++ ...+-++.+.+.+.++|+..-.+... ...+-|..+++..++.++..+..++ +|+
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 543 35788888888888888876322222 2344577888877777666555554 443
No 225
>PRK09848 glucuronide transporter; Provisional
Probab=98.88 E-value=4.9e-08 Score=93.44 Aligned_cols=119 Identities=10% Similarity=0.073 Sum_probs=97.5
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHhhccc
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIG 98 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~ 98 (459)
.++.+|.++...++......++..++.+++++++||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|.+
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~ 334 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG 334 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH
Confidence 4556776666555555555677888999999999999999999999999888887776653 67777788889999999
Q ss_pred ccchhhhHHHHhccCCC-------cchHHHHHHHHHHHHHHHHHHHHh
Q 012626 99 FGNQAVPLYLSEMAPTH-------LRGGLNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 99 ~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~~~ 139 (459)
...+...++..|..|.+ ++|...+..+....+|..+|+.+.
T Consensus 335 ~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 335 VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred HHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988754 358999999999999999988774
No 226
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.88 E-value=3.6e-09 Score=93.41 Aligned_cols=149 Identities=11% Similarity=0.063 Sum_probs=115.3
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHH
Q 012626 262 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVIC 341 (459)
Q Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (459)
.+-+..+.|+++....+.+++.+.+.|.+.||+|+|..++++...+....+++.+. +..+..++.=.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg-------------~sy~~l~vAR~ 167 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG-------------NSYPMLFVARS 167 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc-------------chhHHHHHHHH
Confidence 45567789999999999999999999999999999999999999988888877764 22233444444
Q ss_pred HHHHHHhhcccccccccccccCChhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhh-eee
Q 012626 342 LFVLAFGWSWGPLGWTVPSEIFPLET-RSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFV-YFF 419 (459)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~ 419 (459)
+-+.+.+... ....+++++.+|.+. |++++|+.-.+..+|-.++|+++|.+++..|+...+.+.++.++.-..+ ++.
T Consensus 168 LQgvgsA~~~-tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 168 LQGVGSAFAD-TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HhhhhHHHHH-hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 5555555433 344688889998765 7999999999999999999999999999999887777766666554444 444
Q ss_pred ccCCC
Q 012626 420 LPETK 424 (459)
Q Consensus 420 ~~~~~ 424 (459)
++.++
T Consensus 247 i~p~~ 251 (464)
T KOG3764|consen 247 IEPTE 251 (464)
T ss_pred eCccc
Confidence 44333
No 227
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.87 E-value=1.2e-08 Score=93.11 Aligned_cols=147 Identities=15% Similarity=0.152 Sum_probs=124.9
Q ss_pred ccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhh
Q 012626 26 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 105 (459)
Q Consensus 26 ~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 105 (459)
+.++...|.+.+...+..++...+..++.+|+|.|+.++++..++.+=.++++++++.+.+.+.+.+.|+-.+.......
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCcchHHHHH-HHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc-cCCC
Q 012626 106 LYLSEMAPTHLRGGLNMM-FQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL-LPET 174 (459)
Q Consensus 106 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~-~~e~ 174 (459)
.|+++.+|+|-.++...+ .+...++|.++.+.+ .+...+..|.+..|++.+.+.++..++..+ ++++
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~--~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPL--AGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhh--HHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 999999998887777776 467889999998888 777788889999999988887766655544 5543
No 228
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.86 E-value=5.2e-08 Score=83.20 Aligned_cols=169 Identities=14% Similarity=0.145 Sum_probs=112.6
Q ss_pred hhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccC
Q 012626 244 ILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 323 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (459)
.....+.+..|.|.+.+++|++.++...+.....++..+| ++.|.+.|+.|++..+.++.....++...+......
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~--- 89 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG--- 89 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence 3445577888999999899999999998888888888775 788999999999999999999999888877665421
Q ss_pred CCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 012626 324 PNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFL 403 (459)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 403 (459)
..+....|......++.+.+.... .........+.+| ++||++.|+.-....+++++-..+...+.+........
T Consensus 90 ---~i~~~~~~~~~~~~~l~~~s~~~~-~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll 164 (250)
T PF06813_consen 90 ---RIPSLPVWLMCLFLFLGGNSSCWF-NTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLL 164 (250)
T ss_pred ---ccCccchHHHHHHHHHHcccHHHh-hhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHH
Confidence 111122233333333332222221 1221233347788 57999999999999999998888887776653333333
Q ss_pred HHHHHHHHHHHhheeecc
Q 012626 404 FFAGWVTIMTIFVYFFLP 421 (459)
Q Consensus 404 ~~~~~~~l~~~~~~~~~~ 421 (459)
..+....+++++...+++
T Consensus 165 ~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 165 FLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHHHHHHHHHHHHhhhee
Confidence 333333444444444443
No 229
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.86 E-value=1.1e-08 Score=97.55 Aligned_cols=149 Identities=12% Similarity=0.088 Sum_probs=132.8
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhcc--chhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccc
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYG--RRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGF 99 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 99 (459)
.++.+.++.+.+.+.++......++.+..|+++|+.. ++.+..++++..+++...+++.++++.++..-.+.|+..|.
T Consensus 325 ~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~ 404 (509)
T KOG2504|consen 325 AKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGS 404 (509)
T ss_pred HhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999988 45677888888999999999999999999999999999999
Q ss_pred cchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccc-hhHHHHHhhhHHHHHHHHHHhccC
Q 012626 100 GNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETW-GWRLSLGLAAAPALMMTVGGILLP 172 (459)
Q Consensus 100 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~-gwr~~f~~~~~~~~~~~~~~~~~~ 172 (459)
........+.|+.+.++-..+.|+.....+++.++||+++ +...+.. +|...|+..++..++....++..|
T Consensus 405 ~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPia--g~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 405 FSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIA--GLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccc--eeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9888888999999999999999999999999999999995 4555543 499999999999888887777665
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.85 E-value=2.4e-08 Score=90.64 Aligned_cols=135 Identities=34% Similarity=0.444 Sum_probs=110.7
Q ss_pred hhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHhhcccccchhhhHH
Q 012626 30 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAAN--LAMLLTGRILLGVGIGFGNQAVPLY 107 (459)
Q Consensus 30 ~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~ 107 (459)
.+.++..+.+.++..++.++.|.++||+|||+.+..+.....++.+++++..+ .+.+++.|+.+|++.+...+...++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 57899999999999999999999999999998888888776666777777766 8999999999999999999999999
Q ss_pred HHhccCC-CcchHHHHHHHH-HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHH
Q 012626 108 LSEMAPT-HLRGGLNMMFQL-ATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMM 164 (459)
Q Consensus 108 i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~ 164 (459)
+.|+.|+ ++|+...+.... ...+|.++++.++.........+||+.|.+........
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 9999988 678999998888 58888888886643222223457999666666555443
No 231
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.85 E-value=2e-08 Score=96.11 Aligned_cols=141 Identities=16% Similarity=0.111 Sum_probs=95.9
Q ss_pred HhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchh
Q 012626 253 FYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSF 332 (459)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (459)
...+++.++.|-++ ...++.....++..++.++.|+++|.+|||..++.+.++..++.++.... ++
T Consensus 65 ~~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA-------------~~ 130 (599)
T PF06609_consen 65 SILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA-------------QN 130 (599)
T ss_pred HHHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC-------------Cc
Confidence 33456666777764 45567777888999999999999999999999999999888888877643 22
Q ss_pred hhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 012626 333 SILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWV 409 (459)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (459)
....+....+.+.+.+.. .+....++|..|.+.|..+.++.....-.....++.+...+..+.+|.+.+.+..+.
T Consensus 131 ~~~~iag~~l~GvgaG~~--~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~ 205 (599)
T PF06609_consen 131 MNTFIAGMVLYGVGAGVQ--ELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIW 205 (599)
T ss_pred HHHHHHHHHHHHHhhHHH--HHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHH
Confidence 333444555555443332 233456789999999988877666554444445666665555555666555544443
No 232
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.82 E-value=3.7e-08 Score=88.78 Aligned_cols=131 Identities=12% Similarity=0.057 Sum_probs=104.3
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchh
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 103 (459)
.+|+++++.++..+.+..+..++.++.+++.||+|+||++..+..+..++.++....++... ...-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999998888888877766655554332 34556899999999999
Q ss_pred hhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhH
Q 012626 104 VPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAA 159 (459)
Q Consensus 104 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~ 159 (459)
..+...+..|++ .+++.++. ....+|.++.|++ .+...+..|.+..|++..+
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l--~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLL--QGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHH--HHHHHHhccchHHHHHHHH
Confidence 999999988754 45666775 4566889999987 5565666678888874443
No 233
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.80 E-value=5.7e-08 Score=89.10 Aligned_cols=177 Identities=14% Similarity=0.165 Sum_probs=127.7
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHH-hcC----CCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-CCchhhhhhhHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQ-SMG----FKGDASLYSSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQM 307 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~ 307 (459)
+..++..-+.--.+++.+-..+..|+. +.+ ++.+++.-+...+....-...+++||++||+ |+|+.+..+.++.
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 334444444555555555555554443 355 8888877777777666667788999999995 9999999999999
Q ss_pred HHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChh--hhhhhhHHHHHHHHHHHHH
Q 012626 308 ITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE--TRSAGQSITVAVNLFFTFV 385 (459)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~~ 385 (459)
+++.+++.... ........+.+.+...+.+ .+=+...+++.|.+|++ +|-.+.++.....++|+.+
T Consensus 103 ~iGh~~L~~~~-----------~~~~~gl~i~L~~I~iG~G-l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~ 170 (498)
T COG3104 103 AIGHLVLAISS-----------VSGPGGLYIGLALIIVGTG-LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLI 170 (498)
T ss_pred HHHHHHHhccc-----------cccccHHHHHHHHHHhccc-cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHH
Confidence 99998887641 0112233334444444444 44444568888999754 4777888888899999999
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHhheeeccC
Q 012626 386 IAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPE 422 (459)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 422 (459)
+|.+.+++.++.+|...+..+++....+++.+...++
T Consensus 171 ~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 171 APIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999998888888766653
No 234
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=3.1e-08 Score=82.64 Aligned_cols=313 Identities=13% Similarity=0.146 Sum_probs=166.3
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchh
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 103 (459)
.++..+.++|.+.-..+-...++..+.|.++|+-|||+..+.-++.+.++++ +-.++.|-.++++|.+-|++.+..+.+
T Consensus 66 tYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSa 144 (454)
T KOG4332|consen 66 TYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSA 144 (454)
T ss_pred hcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHH
Confidence 4677888899888888778888899999999999999987766666655544 345788999999999999999988887
Q ss_pred hhHH-HHhccCCCcchHHHHHHHHHHH----HH----HHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHh-ccCC
Q 012626 104 VPLY-LSEMAPTHLRGGLNMMFQLATT----LG----IFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGI-LLPE 173 (459)
Q Consensus 104 ~~~~-i~~~~~~~~r~~~~~~~~~~~~----~G----~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~-~~~e 173 (459)
-.++ +.|.. ++|+.-.-+.....+ +| .+++.+.+......-..|--.+|-..+....+...+.+ -.-|
T Consensus 145 FEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~E 222 (454)
T KOG4332|consen 145 FESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSE 222 (454)
T ss_pred HHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhh
Confidence 7665 45544 233322222222111 22 22222221111111122334444433332222211111 0111
Q ss_pred ChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHH
Q 012626 174 TPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILF 253 (459)
Q Consensus 174 ~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (459)
. -++..|.+.. ...-+...+.+..+ +++.+...+...+-...+.....
T Consensus 223 N------ygdps~~kdl-----------------------ltqf~gaa~aiaSD---~ki~LLG~iqsLFE~smytFVFL 270 (454)
T KOG4332|consen 223 N------YGDPSENKDL-----------------------LTQFKGAARAIASD---EKIALLGAIQSLFEGSMYTFVFL 270 (454)
T ss_pred c------cCChhhhHHH-----------------------HHHhhHhHHHHhcc---hHHHHHHHHHHHHhhhhheeeee
Confidence 1 0111110000 00001112222222 22334444444444444444455
Q ss_pred hHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCc--hhhhhhhHHHHHHHHHHHHHHhhccCCCccccch
Q 012626 254 YAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRR--ALLISGGIQMITCQVIVSIILGLKFGPNQELSKS 331 (459)
Q Consensus 254 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (459)
|.|.+--+ -...--|.++..+.+..++|+-+..++..|-..| ..+.+.+......+.+....... .+ ++.
T Consensus 271 WTPaLspn--~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~v--sP----~ke 342 (454)
T KOG4332|consen 271 WTPALSPN--DEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSV--SP----SKE 342 (454)
T ss_pred ecccCCCC--cccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhcc--CC----CcC
Confidence 55544211 1122346778888888888888887777664433 33444444444333333322211 11 123
Q ss_pred hhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHH
Q 012626 332 FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNL 380 (459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 380 (459)
.....++..+++-.+.+..+..+ .-+-++..|.+.|++.+-+...--+
T Consensus 343 s~~~s~i~F~~~E~cvGlfwPSi-mkmRsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 343 SPSESLIGFCLFEACVGLFWPSI-MKMRSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred CchHHHHHHHHHHHHHhhcchHH-HHHHHhhCCHHHHhhhhhheechhh
Confidence 34445677777888888777666 4666788899998877655444333
No 235
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.76 E-value=3.8e-07 Score=81.36 Aligned_cols=136 Identities=10% Similarity=-0.059 Sum_probs=106.2
Q ss_pred HHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc
Q 012626 249 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 328 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (459)
.......|.+.+.++.+..++++.......+..++.+..+++.+|+|+|+.++.+..+.++++.++.....
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~--------- 100 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS--------- 100 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh---------
Confidence 34445678887779999999999999999999999999999999999999999999999999988764421
Q ss_pred cchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 329 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
.......+..+++.+.+.+..-. ....++..+.|++..+.-+.+.+.++.+|++++|.+.+.+..
T Consensus 101 -~~~y~~FL~~lFila~Gi~~Let-aaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 101 -SKSYGFFLVALFILASGIGLLET-AANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred -hhhHHHHHHHHHHHHhhhHHHHh-ccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 12222333333444444443323 335788888888888888999999999999999999998877
No 236
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.76 E-value=3.9e-08 Score=96.05 Aligned_cols=146 Identities=10% Similarity=0.115 Sum_probs=109.7
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHH
Q 012626 261 SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 340 (459)
Q Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (459)
..+.+.....+..++..++.++|.++.|.++||+|||+++..+.++..++.+..++. .+.+...+.-
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a-------------~~~~~~~~~R 178 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA-------------PNYWMFLIFR 178 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh-------------CcHHHHHHHH
Confidence 355666777888999999999999999999999999999999999888888666654 2334444444
Q ss_pred HHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhheeec
Q 012626 341 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFL 420 (459)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 420 (459)
++.+++.+ +...+.+.+..|.+++++|+.+..+ ......++..++...+++.. +|........+..+..++.+++.
T Consensus 179 fl~G~~~~-~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~ 254 (521)
T KOG0255|consen 179 FLSGFFGS-GPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLP 254 (521)
T ss_pred HHHHhhcc-chhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHcc
Confidence 45555444 3344557888999999999999999 88888888899999998877 56665555555555555555555
Q ss_pred cCC
Q 012626 421 PET 423 (459)
Q Consensus 421 ~~~ 423 (459)
+|.
T Consensus 255 ~Es 257 (521)
T KOG0255|consen 255 PES 257 (521)
T ss_pred CcC
Confidence 554
No 237
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.70 E-value=5.6e-08 Score=93.00 Aligned_cols=151 Identities=11% Similarity=0.018 Sum_probs=116.0
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH----------HhHHHHHHHHHH
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA----------ANLAMLLTGRIL 92 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l 92 (459)
+++|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.+...-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 5689999999999999999999999999999999999999999999999887654311 334455666788
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcc-----ccchhHHHHHh-hhHHHHHHHH
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKL-----ETWGWRLSLGL-AAAPALMMTV 166 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~-----~~~gwr~~f~~-~~~~~~~~~~ 166 (459)
.+++.+..+.+...++.+..|+++++...++.....++|..+++.++...... ++++.++...+ ..+..++...
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999874322211 11233333332 3333344444
Q ss_pred HHhccCC
Q 012626 167 GGILLPE 173 (459)
Q Consensus 167 ~~~~~~e 173 (459)
..+++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 4456785
No 238
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.68 E-value=3.5e-07 Score=88.09 Aligned_cols=112 Identities=14% Similarity=0.093 Sum_probs=89.6
Q ss_pred CchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH-----HHhHHHHHHHHHHHhhcccccch
Q 012626 28 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA-----AANLAMLLTGRILLGVGIGFGNQ 102 (459)
Q Consensus 28 s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~ 102 (459)
+....+++.+...++..++.+++++++||+|+|+.+..+..+..++.+...+ .++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777888999999999999999999999888877766655433 34567777788889999999999
Q ss_pred hhhHHHHhccC-------CCcchHHHHHHHHHHHHHHHHHHHHh
Q 012626 103 AVPLYLSEMAP-------THLRGGLNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 103 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~ 139 (459)
...++++|..+ +++.|..++......-+|..+++.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~ 387 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFI 387 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 33346688998888888888887764
No 239
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=4.5e-07 Score=88.19 Aligned_cols=140 Identities=16% Similarity=0.073 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHh
Q 012626 269 SLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFG 348 (459)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (459)
.+++.+...++..++.++.|+++|++|||+.+..+.+...++.++.... .+.......-++.+.+.+
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-------------~~~~~l~~GR~l~G~g~G 157 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-------------PSWYQLIVGRILTGLGVG 157 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-------------hhHHHHHHHHHHhccchh
Confidence 3789999999999999999999999999999999999999888888775 234455566666666666
Q ss_pred hcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc--cchhHHHHHHHHHHHHHhheeeccCC
Q 012626 349 WSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF--KFGIFLFFAGWVTIMTIFVYFFLPET 423 (459)
Q Consensus 349 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~ 423 (459)
...... ..+.+|..|++.||...+..+....+|..++ .+.+...++. +|...+....+..+...+..++.||+
T Consensus 158 ~~~~~~-piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pes 232 (513)
T KOG0254|consen 158 GASVLA-PVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPES 232 (513)
T ss_pred hhhhcc-hhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 555444 5888999999999999999999888777666 6666665543 67766666666666666666777765
No 240
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.67 E-value=3.9e-07 Score=86.24 Aligned_cols=151 Identities=13% Similarity=0.087 Sum_probs=110.0
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHH
Q 012626 261 SMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 340 (459)
Q Consensus 261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (459)
+.+....+.+...+.+.++.+++.+.++++.||++..+.+....+...+..++-... ++.+..++.-
T Consensus 75 dl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~-------------~s~~~~ialr 141 (495)
T KOG2533|consen 75 DLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV-------------HSFPGLIALR 141 (495)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-------------hhhHHHHHHH
Confidence 456667788999999999999999999999999995555444333333222222221 3345556666
Q ss_pred HHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh------hccchhHHHHHHH-HHHHH
Q 012626 341 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC------SFKFGIFLFFAGW-VTIMT 413 (459)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~l~~ 413 (459)
++.+.+-+.++++. ..++..-+.+++|+.-+|+.+....+|+++++.+...+.. ..||...+++-++ .++.+
T Consensus 142 ~llGl~es~~wP~~-~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 142 FLLGLFESGGWPGV-VAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred HHHHHHhcccchHH-HHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHH
Confidence 77777777777666 4777899999999999999999999999999999887643 3457666666554 45566
Q ss_pred HhheeeccCCCC
Q 012626 414 IFVYFFLPETKG 425 (459)
Q Consensus 414 ~~~~~~~~~~~~ 425 (459)
+++++++|+...
T Consensus 221 i~~f~~lp~~P~ 232 (495)
T KOG2533|consen 221 IVVFFFLPDNPS 232 (495)
T ss_pred heEEEEecCChh
Confidence 677778886654
No 241
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.65 E-value=4.5e-08 Score=85.66 Aligned_cols=130 Identities=15% Similarity=0.081 Sum_probs=98.0
Q ss_pred HHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchH
Q 012626 40 YLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGG 119 (459)
Q Consensus 40 ~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 119 (459)
.+...-|.++.+++.||+|||+.|..+.+++++..++.....+-....+.-+..-+...+.+.+.+.|..|.+|.+-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 45567788999999999999999999999999999887766443322333333333344456678899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCC
Q 012626 120 LNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPE 173 (459)
Q Consensus 120 ~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e 173 (459)
..|.-....-+|.++.|+++ ... ...-..+..+.+..+++..+...++|-
T Consensus 471 gvGtcSsmaRIggI~~p~iA--~~~--e~s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA--MRA--ELSTSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH--HHh--ccceeehHHHHHHHHHHHHHHheeeee
Confidence 99999999999999999995 221 112335566777777777788877773
No 242
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.63 E-value=6.3e-07 Score=83.41 Aligned_cols=146 Identities=17% Similarity=0.257 Sum_probs=115.2
Q ss_pred cCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH-HhHHHHH----HHHHHHhhcccccc
Q 012626 27 YDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-ANLAMLL----TGRILLGVGIGFGN 101 (459)
Q Consensus 27 ~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~----~~r~l~G~~~~~~~ 101 (459)
.+....+.+.+...++-.+.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+... +...+.|+..+..+
T Consensus 240 ~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~ 319 (400)
T PF03825_consen 240 YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH 319 (400)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH
Confidence 566777888888888899999999999999999999999999999988888887 5544433 33567999999999
Q ss_pred hhhhHHHHhccCCCcchHHHHHHHHH-HHHHHHHHHHHhhhhhccccc------hhHHHHHhhhHHHHHHHHHHh-ccCC
Q 012626 102 QAVPLYLSEMAPTHLRGGLNMMFQLA-TTLGIFTANMINYGTQKLETW------GWRLSLGLAAAPALMMTVGGI-LLPE 173 (459)
Q Consensus 102 ~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~g~~~~~~~~~~~~~------gwr~~f~~~~~~~~~~~~~~~-~~~e 173 (459)
..+..++.+..|++.|+++.+++... .++|..+|..++ +...+.. .|...+.+.++..++..+++. +++|
T Consensus 320 ~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig--G~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 320 AASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG--GWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH--HHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999998764 689999999994 4444433 355666666666666555443 3454
Q ss_pred C
Q 012626 174 T 174 (459)
Q Consensus 174 ~ 174 (459)
+
T Consensus 398 ~ 398 (400)
T PF03825_consen 398 K 398 (400)
T ss_pred C
Confidence 3
No 243
>PRK09669 putative symporter YagG; Provisional
Probab=98.61 E-value=1.2e-06 Score=83.77 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=85.6
Q ss_pred hhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH--HHhHHHHHHHHHHHhhcccccchhhhHH
Q 012626 30 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA--AANLAMLLTGRILLGVGIGFGNQAVPLY 107 (459)
Q Consensus 30 ~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 107 (459)
+..+.+.....+...++.+++++++||+|+|+.+..+.++.+++.+...+ .++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666667778888999999999999999999888766654443333 3567778888899999999999999999
Q ss_pred HHhccCC-------CcchHHHHHHHHHHHHHHHHHHHHh
Q 012626 108 LSEMAPT-------HLRGGLNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 108 i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~ 139 (459)
++|..+. ++.|..++.......+|..+|+.++
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 9998862 2345678888888888888888774
No 244
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.57 E-value=5.9e-07 Score=85.45 Aligned_cols=110 Identities=19% Similarity=0.153 Sum_probs=99.2
Q ss_pred hhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHhhcccccchhhhHH
Q 012626 30 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIGFGNQAVPLY 107 (459)
Q Consensus 30 ~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~ 107 (459)
...+.+.....++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+...++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5678888899999999999999999999999999999999999999988886 99999999999999999999999999
Q ss_pred HHhccCC-------CcchHHHHHHHHHHHHHHHHHHHHh
Q 012626 108 LSEMAPT-------HLRGGLNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 108 i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~ 139 (459)
++|..+. ++.|..++.......+|..+++.+.
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 9999873 3458889999988888888888764
No 245
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.55 E-value=4.9e-07 Score=76.37 Aligned_cols=149 Identities=15% Similarity=0.049 Sum_probs=108.4
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHhhcccc
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGIS-FLLGAALNAAAANLAMLLTGRILLGVGIGF 99 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 99 (459)
.++.+|+|+...+.+.+..+.-.++.+++.|.++||+|++...+.+..+ ..++..+..+ +++.=.++..+.|++.+.
T Consensus 291 F~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysl 368 (459)
T KOG4686|consen 291 FQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSL 368 (459)
T ss_pred HHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHH
Confidence 4678999999999999999999999999999999999999777665444 3334333333 334445667888888776
Q ss_pred cchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHh-hhHHHHHHHHHHhcc
Q 012626 100 GNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGL-AAAPALMMTVGGILL 171 (459)
Q Consensus 100 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~-~gwr~~f~~-~~~~~~~~~~~~~~~ 171 (459)
.-......++-..|+++.|.+.+..+...++|..+-|+++......++ +.|--.|++ .+.+++....+.+.+
T Consensus 369 lAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 369 LACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 655567788889999999999999999999999999999433332222 335444544 444455544444444
No 246
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.55 E-value=8.3e-10 Score=105.90 Aligned_cols=145 Identities=19% Similarity=0.205 Sum_probs=104.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHH
Q 012626 268 ASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAF 347 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (459)
..+.......++.++|.++.|++.||+|||+.+..+..+..++.++..+.. ...+.+.....-++.+.+.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~~R~~~G~~~ 116 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAP----------SYNNFWMLLIGRFLIGFGI 116 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccc----------ccccccccccccccccccc
Confidence 356788889999999999999999999999999998888888877766541 0013344444445556655
Q ss_pred hhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh---ccchhHHHHHHHHHHHHHhheeeccCC
Q 012626 348 GWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS---FKFGIFLFFAGWVTIMTIFVYFFLPET 423 (459)
Q Consensus 348 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~ 423 (459)
+.... ....++.|..|++.|+...++.+....+|..++..+...+.+. ..|.....+..+..+...+...++||.
T Consensus 117 g~~~~-~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 117 GGAYV-VSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred ccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 54444 4468889999999999999999988888877766655433222 236666666666665666666777775
No 247
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.54 E-value=4.3e-07 Score=82.13 Aligned_cols=118 Identities=18% Similarity=0.217 Sum_probs=90.3
Q ss_pred CCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhh----ccchhH-HHHHHHHHHHHHHHHHHHHhHH------------
Q 012626 22 NNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRD----YGRRAS-IICGGISFLLGAALNAAAANLA------------ 84 (459)
Q Consensus 22 ~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr----~Grr~~-~~~~~~~~~~~~~~~~~~~~~~------------ 84 (459)
..++|++....+.+--..-+...+.+++.|..+|| |||||. +..+.+...++..+.+++.++.
T Consensus 59 l~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~ 138 (498)
T KOG0637|consen 59 LQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVK 138 (498)
T ss_pred HHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccc
Confidence 34568888877777777778888999999999995 898755 5556677777777888876543
Q ss_pred -----HHHHHHHHHhhcccccchhhhHHHHhccCCCcchH-HHHHHHHHHHHHHHHHHHHh
Q 012626 85 -----MLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGG-LNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 85 -----~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~~~ 139 (459)
.++++--+.=++.-.....+-+++.|...++++.+ +.+.+....++|..+|..++
T Consensus 139 ~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 139 PRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred hHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 34444444555666777889999999997766666 99999999999999988774
No 248
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.52 E-value=1.1e-06 Score=79.54 Aligned_cols=155 Identities=19% Similarity=0.175 Sum_probs=94.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc-hhhhHHHHHHHH
Q 012626 264 FKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK-SFSILVVVVICL 342 (459)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 342 (459)
+++...+.......++.+.|+++.|++.||+|||++.....+++.++-++..+.. ...+. .-.+++...=.+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~-------~~~~~~~~m~~L~~~R~~ 153 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSV-------GTTSPLGVMMTLCFFRFL 153 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCC-------CCCCCcchhhHHHHHHHH
Confidence 4455667888889999999999999999999999998888777777766443321 11111 111222222334
Q ss_pred HHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH---Hhh-cc-----------chhHHHHHH
Q 012626 343 FVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL---LCS-FK-----------FGIFLFFAG 407 (459)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~---~~~-~~-----------~~~~~~~~~ 407 (459)
.+.+.+ +-.|+..+.++|....+.||+-.+........|...+..+.-.+ .++ .+ |...+.++.
T Consensus 154 LGiGIG-GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~ 232 (538)
T KOG0252|consen 154 LGIGIG-GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGA 232 (538)
T ss_pred hhcccc-CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHH
Confidence 444444 44567778899999999999887776666555444333333222 221 11 344444444
Q ss_pred HHHHHHHhheeeccCCCCC
Q 012626 408 WVTIMTIFVYFFLPETKGV 426 (459)
Q Consensus 408 ~~~l~~~~~~~~~~~~~~~ 426 (459)
+..+.....-+.+||+++-
T Consensus 233 vpa~~~ly~Rl~M~Et~~Y 251 (538)
T KOG0252|consen 233 VPALLVLYFRLKMPETARY 251 (538)
T ss_pred HHHHHHHHhhhcCCcchhH
Confidence 4444444444556666543
No 249
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.52 E-value=4.4e-06 Score=73.71 Aligned_cols=337 Identities=12% Similarity=0.004 Sum_probs=168.9
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhh-----hccchhHHHH-HHHHHHHHHHHHHHH-----------HhHHH
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTR-----DYGRRASIIC-GGISFLLGAALNAAA-----------ANLAM 85 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~d-----r~Grr~~~~~-~~~~~~~~~~~~~~~-----------~~~~~ 85 (459)
+.-|.|.++.+....++.= ..--++|.++.| |+||||..+. +..+.+..+.+.+.- ++...
T Consensus 58 ~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~ 135 (510)
T KOG3574|consen 58 QAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVA 135 (510)
T ss_pred cCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHH
Confidence 3446677666654433321 233578999999 9999986544 333333333332221 33344
Q ss_pred HHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc-------cchhH-------
Q 012626 86 LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE-------TWGWR------- 151 (459)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~-------~~gwr------- 151 (459)
+...-++.-+..+.--.+.-.+.-.+..+++.|-+......+.+.|..++..+ ...... ..+|.
T Consensus 136 lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~i--fLaL~s~dF~N~y~rs~P~~~g~It 213 (510)
T KOG3574|consen 136 LTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVV--FLALESPDFCNTYLRSIPLDQGFIT 213 (510)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcce--eeEecChhhhhHHHhcCcCccceEE
Confidence 44455666666777777888888888899999999888888888888887665 222211 01121
Q ss_pred --HHHHhhhHHHHHHHHHHhccCCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCCchHHHhcccc
Q 012626 152 --LSLGLAAAPALMMTVGGILLPETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRN 229 (459)
Q Consensus 152 --~~f~~~~~~~~~~~~~~~~~~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (459)
...++.+...++.-.++.+..+++.....+ +......+.-+-++++++.+.
T Consensus 214 L~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~---------------------------e~~~~i~~~yk~l~~vLklk~ 266 (510)
T KOG3574|consen 214 LAGYLWFWGALFIVATTLVALLKKENDESVDE---------------------------ELELGIHESYKLLRDVLKLKS 266 (510)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCchhhhh---------------------------hhhcCHHHHHHHHHHHHcCcc
Confidence 223344444444444444443332100000 000000000112344554444
Q ss_pred hhHHHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhh-----hh
Q 012626 230 RPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLIS-----GG 304 (459)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-----~~ 304 (459)
.+....... ..-.++..-....+.-+-++|++..+.+....+..-..++.....|++..+ +|++... --
T Consensus 267 v~~la~i~l----t~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~~~lka~~~R 340 (510)
T KOG3574|consen 267 VRWLAGILL----TGKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLNVFLKAVPYR 340 (510)
T ss_pred HHHHHHHHH----HHHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcchHHHHhhhHH
Confidence 332222111 122233333444455566789988887766544444445444444443321 2211110 11
Q ss_pred HHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHH
Q 012626 305 IQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTF 384 (459)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 384 (459)
+..+.....+.+.....-.+++..+.......+....+........+... ++..+++.+|...|+.+.+.|+..++|+-
T Consensus 341 ~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~-maf~aqisdp~iggTymTlLNTLsnLGg~ 419 (510)
T KOG3574|consen 341 LGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSG-MAFHAQISDPAIGGTYMTLLNTLSNLGGN 419 (510)
T ss_pred HHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHH-HHHHhhcCCcccCccHHHHHHHHHHhcCC
Confidence 11222222222222111111112222222222211222222222222222 46677889999999999999999999998
Q ss_pred HHHHHHHHHHhhc
Q 012626 385 VIAQIFLTLLCSF 397 (459)
Q Consensus 385 ~~~~~~~~~~~~~ 397 (459)
--..+...+.|..
T Consensus 420 wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 420 WPGTVALWLADGL 432 (510)
T ss_pred cHHHHHHHhcccC
Confidence 8888888887754
No 250
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.49 E-value=2.8e-06 Score=66.93 Aligned_cols=116 Identities=17% Similarity=0.135 Sum_probs=96.5
Q ss_pred ccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhh
Q 012626 26 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVP 105 (459)
Q Consensus 26 ~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 105 (459)
++++..--.-.++.+....+++++.+.+.+++|.|+.+++|.+.+.+-.... +-++.+.++.+-++.|++.+..+++.-
T Consensus 33 ~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 33 SISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred cccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhh
Confidence 3444444445566667778888888999999999999999999988655543 567788999999999999999999999
Q ss_pred HHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhh
Q 012626 106 LYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGT 142 (459)
Q Consensus 106 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~ 142 (459)
.++.+..++++|++..+++......+.++|.++....
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998874433
No 251
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.48 E-value=6.1e-07 Score=83.32 Aligned_cols=155 Identities=14% Similarity=0.017 Sum_probs=102.7
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHH
Q 012626 262 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGR-RALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVI 340 (459)
Q Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (459)
.+-+.+-.|+......++..++.+..|+...|.++ |++++.+.+...++.++.....+. ++...+++++.-
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~--------~~~~~y~mL~~R 137 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYV--------PNGVKYLMLVAR 137 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhc--------ccchHHHHHHHH
Confidence 67777888999999999999999999999999876 888889999999999888554321 122233333333
Q ss_pred HHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc-------------cchhHHHHHH
Q 012626 341 CLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF-------------KFGIFLFFAG 407 (459)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 407 (459)
++ .+.+.+.......|+++..-+++|.++++..+....+|.++||.+...+..-. -|....++.+
T Consensus 138 ~l--~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~ 215 (488)
T KOG2325|consen 138 IL--TGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMA 215 (488)
T ss_pred HH--cCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHH
Confidence 33 33333334455788888777788888888888877777777776654433211 1333444444
Q ss_pred H-HHHHHHhheeeccCCCCC
Q 012626 408 W-VTIMTIFVYFFLPETKGV 426 (459)
Q Consensus 408 ~-~~l~~~~~~~~~~~~~~~ 426 (459)
+ .++..+++.++.+|.++.
T Consensus 216 i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 216 ILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHHHHHHhheeecccC
Confidence 4 444444555566665443
No 252
>PRK11462 putative transporter; Provisional
Probab=98.47 E-value=8.5e-06 Score=78.06 Aligned_cols=144 Identities=13% Similarity=0.090 Sum_probs=94.6
Q ss_pred cchHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh----hCCchhhh-hhhHHHHHHHHHHHHHHh
Q 012626 246 TGINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDK----LGRRALLI-SGGIQMITCQVIVSIILG 319 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~-~~~~~~~~~~~~~~~~~~ 319 (459)
..+.....|..+++.+ .|+++..++.+..+.-+...+.-++.|+++|| +|||+..+ ++....+++..++...
T Consensus 23 ~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~-- 100 (460)
T PRK11462 23 IIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST-- 100 (460)
T ss_pred HHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC--
Confidence 3445555666666655 99999999999999999999999999999997 47766554 4445555544333221
Q ss_pred hccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCC-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012626 320 LKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP-LETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 397 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 397 (459)
+. ........+..+..+++..++.....|- .++..|+.+ +++|++..+.....+.+|..+++.+...+....
T Consensus 101 ----p~-~s~~~~~~y~~~~~~~~~~~~t~~~ipy-~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 101 ----PD-LSMNGKMIYAAITYTLLTLLYTVVNIPY-CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred ----CC-CCcchHHHHHHHHHHHHHHHHHHHhccH-HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 0011112223333344455555444444 467778775 789999999999999999888887766655443
No 253
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.41 E-value=5.5e-07 Score=61.87 Aligned_cols=76 Identities=17% Similarity=0.078 Sum_probs=68.0
Q ss_pred hhhhhcCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 012626 12 VYLKKKHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLL 87 (459)
Q Consensus 12 ~~~~~~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 87 (459)
.......|.+++|.++|.++.|++.+..++||.+|.+...++.++..+++.+..+.+...+..+.+++.++++...
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 3345567778899999999999999999999999999999999998889999999999999999999998887543
No 254
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.39 E-value=4.4e-07 Score=83.67 Aligned_cols=145 Identities=18% Similarity=0.095 Sum_probs=125.2
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchh
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQA 103 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 103 (459)
|.+-.+...|........+-.+.-++.+++..|+|+-+++..++.+..+=.+..+..+|.|+.+...+++|+..+..+.+
T Consensus 400 d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa 479 (618)
T KOG3762|consen 400 DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAA 479 (618)
T ss_pred hcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHH
Confidence 34455666677777778888899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhccCCCcchHHHHHHHH-HHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc
Q 012626 104 VPLYLSEMAPTHLRGGLNMMFQL-ATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 170 (459)
Q Consensus 104 ~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (459)
+.+|++...||+-|..+.++.+. ..++|--+|.++ ++.....+|=|..|.+.++.+++.++....
T Consensus 480 ~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI--GG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 480 IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI--GGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh--hhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998754 467788888888 666667788899999998888877665544
No 255
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.34 E-value=5e-05 Score=73.54 Aligned_cols=147 Identities=15% Similarity=0.146 Sum_probs=113.9
Q ss_pred CCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhH----------------
Q 012626 21 ENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAANL---------------- 83 (459)
Q Consensus 21 ~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~~~---------------- 83 (459)
+.+++|.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..++..+..++...
T Consensus 64 lt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~ 143 (571)
T KOG1237|consen 64 LTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNV 143 (571)
T ss_pred HHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCc
Confidence 3455677777777777787777788889999999985 99999999999988886655443221
Q ss_pred ---------HHHHHHHHHHhhcccccchhhhHHHHhccC---CC---cchHHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 012626 84 ---------AMLLTGRILLGVGIGFGNQAVPLYLSEMAP---TH---LRGGLNMMFQLATTLGIFTANMINYGTQKLETW 148 (459)
Q Consensus 84 ---------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~ 148 (459)
..++.+.-+..+|.|+.-+...++-+|-++ ++ ++...+.++....++|..++..+ ..+..+..
T Consensus 144 c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~--~vyiq~~~ 221 (571)
T KOG1237|consen 144 CESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTV--LVYIQDNV 221 (571)
T ss_pred ccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHH--HHhhhhcc
Confidence 256777788888999999999999999998 32 22367888888999999988877 56665678
Q ss_pred hhHHHHHhhhHHHHHHHHHHh
Q 012626 149 GWRLSLGLAAAPALMMTVGGI 169 (459)
Q Consensus 149 gwr~~f~~~~~~~~~~~~~~~ 169 (459)
+|.+.|-+..+...+++++++
T Consensus 222 ~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 222 GWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred cceeeccHHHHHHHHHHHHHH
Confidence 999999988887766655443
No 256
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.33 E-value=1.2e-05 Score=74.84 Aligned_cols=108 Identities=21% Similarity=0.349 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHH---------hHHHHHHHHHHHhhcccccchhhhHHHHhccCCC---cchHHHHHHHHHH
Q 012626 61 ASIICGGISFLLGAALNAAAA---------NLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTH---LRGGLNMMFQLAT 128 (459)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 128 (459)
|++++|.+++.+|.++..++. +.+.++++-.+.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 577889999999998865552 2267899999999999999999999999999765 4678888999999
Q ss_pred HHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc
Q 012626 129 TLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL 170 (459)
Q Consensus 129 ~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~ 170 (459)
++|..++..+ .....++.||.+.|.+.++..++..+.++.
T Consensus 82 n~G~~~~~~~--~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTL--VPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHC--CCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhccc--chhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999888 566667789999999999888877665544
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.31 E-value=3.3e-05 Score=68.63 Aligned_cols=155 Identities=17% Similarity=0.027 Sum_probs=92.6
Q ss_pred HHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHH
Q 012626 258 LFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVV 337 (459)
Q Consensus 258 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (459)
+.+++|++..+.+.++........+...+.|.+.||+|||+.-+..++...++++.-.. ++....+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~--------------~~~~~L~ 125 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS--------------SNYPVLL 125 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc--------------cccHHHH
Confidence 44679999999999999999999999999999999999999988777777766653221 2223333
Q ss_pred HHHHHHHHHHhhccccccccccccc----CChhhhhhhhHHHHHH-HHHHHHHHHHHHHHHHhhccc--hhHHHHHHHHH
Q 012626 338 VVICLFVLAFGWSWGPLGWTVPSEI----FPLETRSAGQSITVAV-NLFFTFVIAQIFLTLLCSFKF--GIFLFFAGWVT 410 (459)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 410 (459)
+.=++.+......+...-.=++.|. +|++..+...+...+. +.+.++.+..+...+.+..+. ..++..+..+.
T Consensus 126 ~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l 205 (354)
T PF05631_consen 126 LGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLL 205 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 3334444444433333211122333 4555555555555533 334455555555566665543 44455554444
Q ss_pred H-HHHhheeeccCCCCC
Q 012626 411 I-MTIFVYFFLPETKGV 426 (459)
Q Consensus 411 l-~~~~~~~~~~~~~~~ 426 (459)
+ .++++....+|..+.
T Consensus 206 ~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 206 AVAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHHhcccccCCC
Confidence 4 444444455665543
No 258
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.28 E-value=1.7e-05 Score=73.70 Aligned_cols=115 Identities=14% Similarity=0.159 Sum_probs=96.0
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHhhcccccc
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAA--NLAMLLTGRILLGVGIGFGN 101 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~ 101 (459)
.+|.++.+..+.......+..++.+++.++++|+|+|+++.++.++..++.++..+.+ +.+.+++..++.+++.+...
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~ 345 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIAN 345 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccc
Confidence 3566667777788888888888899999999999999999999999999999988876 78899999999999999999
Q ss_pred hhhhHHHHhccCC-------CcchHHHHHHHHHHHHHHHHHHHH
Q 012626 102 QAVPLYLSEMAPT-------HLRGGLNMMFQLATTLGIFTANMI 138 (459)
Q Consensus 102 ~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~ 138 (459)
+...++++|..+- ++-|...+......=+|..++..+
T Consensus 346 ~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 346 PLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred cccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999887642 233677777777777787777655
No 259
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.28 E-value=0.00014 Score=67.30 Aligned_cols=42 Identities=12% Similarity=-0.058 Sum_probs=34.3
Q ss_pred cccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012626 356 WTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 397 (459)
Q Consensus 356 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 397 (459)
.++-+.+..|..-|+.+-+.|++.++|+---..+.-++.|..
T Consensus 427 ~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 427 MAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 466678888999999999999999999877776766666643
No 260
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.27 E-value=2e-05 Score=69.55 Aligned_cols=144 Identities=18% Similarity=0.117 Sum_probs=110.5
Q ss_pred ccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccch
Q 012626 24 YCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQ 102 (459)
Q Consensus 24 ~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 102 (459)
|-|+|..+.|++.+...+.....++....+++|. ++|+..+...+++.++.+.+.+.+.-..+.. -++.|+|.|..++
T Consensus 237 ~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~ 315 (395)
T COG2807 237 DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFP 315 (395)
T ss_pred HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHH
Confidence 4599999999999999999999999999999975 6788888888888888888877765433333 4999999999999
Q ss_pred hhhHHHHhccCCCc-chHHHHHHHHHHHHHHHHHHHHhhhhhcccc-chhHHHHHhhhHHHHHHHHHHhc
Q 012626 103 AVPLYLSEMAPTHL-RGGLNMMFQLATTLGIFTANMINYGTQKLET-WGWRLSLGLAAAPALMMTVGGIL 170 (459)
Q Consensus 103 ~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~-~gwr~~f~~~~~~~~~~~~~~~~ 170 (459)
.+..++.+-.++.+ -++..++.+....+=..+||.+ .+...|. .+|+......+...++..+.-+.
T Consensus 316 laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l--~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 316 LALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWL--FGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhh--HhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 99999998876443 4455555555555555667877 4444443 57999988887777766555443
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.23 E-value=0.00035 Score=65.78 Aligned_cols=90 Identities=11% Similarity=0.103 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhh--cccc--chhH--HHHH
Q 012626 82 NLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ--KLET--WGWR--LSLG 155 (459)
Q Consensus 82 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~--~~~~--~gwr--~~f~ 155 (459)
.++..++.-++.|++.+.......++.+ .+|++ .+..+..+.+++.+++.++..... ..+. ..++ .-|.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~ 179 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFG 179 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHH
Confidence 5677777888999999888888887776 45543 345555555555555544421111 1111 1222 2233
Q ss_pred hhhHHHHHHHHHHhccCCChH
Q 012626 156 LAAAPALMMTVGGILLPETPN 176 (459)
Q Consensus 156 ~~~~~~~~~~~~~~~~~e~p~ 176 (459)
+..++.+++++....+++.|.
T Consensus 180 ~a~~v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 180 TPCVVQLICIVCYLLLPKLPF 200 (437)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 344444455555556777764
No 262
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.17 E-value=5.8e-05 Score=71.20 Aligned_cols=136 Identities=15% Similarity=0.135 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccc
Q 012626 276 TGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLG 355 (459)
Q Consensus 276 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (459)
.++..++.+...|.++|++|||..+........+....+.+.. ++.++ ..-..+++. ......
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~---------------~~~~~-~~~l~g~~~-~~~s~~ 133 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG---------------YWFFL-LLGLSGGFS-AIFSVG 133 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH---------------HHHhh-hcccccchh-hhhhhh
Confidence 3677888889999999999999999888777776666655531 22222 222222222 223344
Q ss_pred cccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH-HhheeeccCCCCCCH
Q 012626 356 WTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMT-IFVYFFLPETKGVPI 428 (459)
Q Consensus 356 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~ 428 (459)
.++++|....+.|....|+.+.....+..++|.+.+.+.+..++...+.++.+..+.. ......+||+...+.
T Consensus 134 ~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~ 207 (463)
T KOG2816|consen 134 FAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKE 207 (463)
T ss_pred hhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccc
Confidence 6888999999999999999999999999999999999999988766666666555444 445567787655543
No 263
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.17 E-value=7.5e-05 Score=67.60 Aligned_cols=152 Identities=14% Similarity=0.077 Sum_probs=124.4
Q ss_pred cCCCCCCccccCchhHHHHHHhHHHHHHHhhhhhhhhhh-hccchhHHHHHHHHHHHHHHHHHHH---HhHHHHHHHHHH
Q 012626 17 KHAHENNYCKYDNQGLAAFTSSLYLAGLVASFVASPVTR-DYGRRASIICGGISFLLGAALNAAA---ANLAMLLTGRIL 92 (459)
Q Consensus 17 ~~~~~~~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~d-r~Grr~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l 92 (459)
..|.--+.||++..+...+......|..++....|++.. |.++|+.-.+|+....++..+..++ .+.+.+...-++
T Consensus 231 LEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 231 LEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred cCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 445556779999999999999999999999999998877 6788888888888888887765544 577899999999
Q ss_pred HhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc--------cccchhHHHHHhhhHHHHHH
Q 012626 93 LGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK--------LETWGWRLSLGLAAAPALMM 164 (459)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~--------~~~~gwr~~f~~~~~~~~~~ 164 (459)
.|++.|.......+...|..++++.|..+|.++....+...++..++....+ ....+|-.+|.+.++..++.
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a 390 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAA 390 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988888888777533322 12356888888877776666
Q ss_pred HHHH
Q 012626 165 TVGG 168 (459)
Q Consensus 165 ~~~~ 168 (459)
..+.
T Consensus 391 ~~ll 394 (403)
T PF03209_consen 391 LVLL 394 (403)
T ss_pred HHHH
Confidence 5544
No 264
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.07 E-value=3.5e-05 Score=52.71 Aligned_cols=64 Identities=16% Similarity=0.298 Sum_probs=54.5
Q ss_pred HhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhH
Q 012626 242 FQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGI 305 (459)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 305 (459)
+..+.....+.-|.|.++++.|+++.+.|.+..+..+..+++.++.|.++||.++++.......
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3444455667778888889999999999999999999999999999999999999888765543
No 265
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.04 E-value=0.013 Score=55.81 Aligned_cols=254 Identities=12% Similarity=0.055 Sum_probs=134.7
Q ss_pred CchhHHHHHHhHHH-HHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH--H-----------------------
Q 012626 28 DNQGLAAFTSSLYL-AGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA--A----------------------- 81 (459)
Q Consensus 28 s~~~~~~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~--~----------------------- 81 (459)
+++.+..+-....+ ...+...+..++++|++|++++-.....+.....++++. |
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 45556666665555 445667889999999999998877766666665555543 1
Q ss_pred ------hHHHHHHHHHHHhhcccccch-hhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhc-------ccc
Q 012626 82 ------NLAMLLTGRILLGVGIGFGNQ-AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQK-------LET 147 (459)
Q Consensus 82 ------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~-------~~~ 147 (459)
+.|.+.+.-+..-+-.....+ .-..+..|.++.+|-.|..++++.+.++|.++++.+...... ...
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~ 215 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGV 215 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence 112222222333333233333 357888999999999999999999999999998877433332 112
Q ss_pred chhHHHHHh-hhHH---HHHHHHHHhccC----CChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHHHhhcccCC
Q 012626 148 WGWRLSLGL-AAAP---ALMMTVGGILLP----ETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKH 219 (459)
Q Consensus 148 ~gwr~~f~~-~~~~---~~~~~~~~~~~~----e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (459)
..|...+.. .++. +++......++. +.|+.. .....+++++.+.
T Consensus 216 ~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~----------------------------~~~~~~kk~k~k~ 267 (491)
T PF03219_consen 216 DAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY----------------------------PSAKKKKKKKPKM 267 (491)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc----------------------------hhhhcccccCCCc
Confidence 346544322 2222 222222222221 111000 0111122223344
Q ss_pred chHHHhcccchhHHHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCch----hHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 012626 220 PFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDA----SLYSSAMTGAVLASSTLISIATVDKLG 295 (459)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~ 295 (459)
+.++-++...+.+.+..+++.........+.+........++.--++.+ .|......++..++..++++.+.+|+|
T Consensus 268 s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~G 347 (491)
T PF03219_consen 268 SLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFG 347 (491)
T ss_pred cHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4444443333333344444433333333333333333333332233332 244455566666777788899999999
Q ss_pred CchhhhhhhHHHHH
Q 012626 296 RRALLISGGIQMIT 309 (459)
Q Consensus 296 ~~~~~~~~~~~~~~ 309 (459)
-+....+.-+.+.+
T Consensus 348 W~~~AlitPiv~li 361 (491)
T PF03219_consen 348 WRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHhHHHHHH
Confidence 88776665444433
No 266
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.95 E-value=0.00044 Score=68.47 Aligned_cols=158 Identities=15% Similarity=0.098 Sum_probs=100.8
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhh
Q 012626 255 APVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDK-LGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFS 333 (459)
Q Consensus 255 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (459)
..++.+.+|++...+..+........-+..+++|++.|+ +|+++.+..+.++..++..++.+... +. .......
T Consensus 11 vlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~----~~-~~~~~~~ 85 (654)
T TIGR00926 11 VLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI----PS-SGHPLHD 85 (654)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC----cc-cccchHH
Confidence 333444588888877777777766667777889999997 59999999988888887776654311 00 0000111
Q ss_pred hHHHHHHHHHHHHHhhcccccccccccccCChh---hhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc-------cchhHH
Q 012626 334 ILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE---TRSAGQSITVAVNLFFTFVIAQIFLTLLCSF-------KFGIFL 403 (459)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~ 403 (459)
...+..+.+...+.+.. -|...+...|.++++ .+.....+.....++|+.+++.+.+++.+.. +|...+
T Consensus 86 ~~~l~gLaLia~G~Ggi-Kp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF 164 (654)
T TIGR00926 86 LLDLLGLALIALGTGGI-KPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAF 164 (654)
T ss_pred HHHHHHHHHHHhhcccc-ccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHH
Confidence 22333344444444433 333357777777643 4677888888999999999999999887543 355555
Q ss_pred HHHHHHHHHHHhhee
Q 012626 404 FFAGWVTIMTIFVYF 418 (459)
Q Consensus 404 ~~~~~~~l~~~~~~~ 418 (459)
.+.+++.++++++..
T Consensus 165 ~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 165 GVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555555555555443
No 267
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.88 E-value=0.0004 Score=58.75 Aligned_cols=57 Identities=12% Similarity=0.080 Sum_probs=38.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhh---hccccchhHHHHHhhhHHHHHHHHHHhcc
Q 012626 115 HLRGGLNMMFQLATTLGIFTANMINYGT---QKLETWGWRLSLGLAAAPALMMTVGGILL 171 (459)
Q Consensus 115 ~~r~~~~~~~~~~~~~G~~~g~~~~~~~---~~~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (459)
|+|+..+.+...+.++|.++.-...... .......|++++.+.+++.++-+++...+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6778888888888999988875541111 11112469999999888877766665544
No 268
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.76 E-value=4.3e-06 Score=80.77 Aligned_cols=154 Identities=13% Similarity=-0.056 Sum_probs=0.9
Q ss_pred HHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhh
Q 012626 241 MFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGL 320 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (459)
.+.+...........+.+-++++++..++|++.+..-++.++..++..++.+|.+|-+.+-.+.++++++.++..+-...
T Consensus 12 ~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~ 91 (539)
T PF03137_consen 12 GLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFL 91 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhh
Confidence 33334444444555566666799999999999999999999999999999999888888888888888888877643211
Q ss_pred c--c--CCCc-----------------------------cccchhhhHHHHHHHHHHHHHhhc---ccccccccccccCC
Q 012626 321 K--F--GPNQ-----------------------------ELSKSFSILVVVVICLFVLAFGWS---WGPLGWTVPSEIFP 364 (459)
Q Consensus 321 ~--~--~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p 364 (459)
. + .... .............+++.....+.+ ..++..+|+-|..+
T Consensus 92 ~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~ 171 (539)
T PF03137_consen 92 SGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVS 171 (539)
T ss_dssp ------------------------------------------------------------SSS-----------------
T ss_pred cCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccc
Confidence 1 0 0000 000111111222222222223333 34566789999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 365 LETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 365 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
++..+...|+......+|-++|-.+.+...
T Consensus 172 ~~~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 172 KKNSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ------------------------------
T ss_pred cccCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 999999999999998888877776666554
No 269
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.75 E-value=7.3e-05 Score=51.12 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=42.6
Q ss_pred CccccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHH
Q 012626 23 NYCKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISF 70 (459)
Q Consensus 23 ~~~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 70 (459)
++.|+|+.++|.+.++..+...++++++|.++||+|+++..+....++
T Consensus 28 ~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 28 KQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 357999999999999999999999999999999999988877765543
No 270
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.71 E-value=0.044 Score=51.20 Aligned_cols=266 Identities=10% Similarity=-0.014 Sum_probs=143.2
Q ss_pred CCCcccc---CchhHHHHHHhHHH-HHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH---------Hh-----
Q 012626 21 ENNYCKY---DNQGLAAFTSSLYL-AGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA---------AN----- 82 (459)
Q Consensus 21 ~~~~~~~---s~~~~~~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~---------~~----- 82 (459)
++|.+.+ ++..+.++-+...+ +..+..++.+++.+++.|.+++-.-+..+....+++++. ++
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~ 128 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSR 128 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHH
Confidence 4444444 45667777777777 667889999999999999999888777777777777664 11
Q ss_pred ------------------HHHHHHHHHHHhhcccccch-hhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhh
Q 012626 83 ------------------LAMLLTGRILLGVGIGFGNQ-AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQ 143 (459)
Q Consensus 83 ------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~ 143 (459)
.|...+.-.+.=+-.+.... .-.....|.++.+|-.|..++++.+.+++..++..+.....
T Consensus 129 ~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 129 DLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 02222222222222222222 34567789999999999999999999999999887743332
Q ss_pred cccc--------chhHHHHHhhhHHHHHHHHHHhcc----CCChHHHHhhCcHHHHHHHHHHHhCCCcccHHHHHHHHHH
Q 012626 144 KLET--------WGWRLSLGLAAAPALMMTVGGILL----PETPNSLIERGKKVEGRRVLEKIRGTKEVNAEYQDMVDAS 211 (459)
Q Consensus 144 ~~~~--------~gwr~~f~~~~~~~~~~~~~~~~~----~e~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
...+ ..-+..+.+.+..+++...+..++ ++.|+...++. .+
T Consensus 209 k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~---------------------------~k 261 (509)
T COG3202 209 KHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAK---------------------------KK 261 (509)
T ss_pred hchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHh---------------------------cc
Confidence 2111 113344444444444444443332 34443221111 11
Q ss_pred HhhcccCCchHHHhcccchhHHHHHHHHHHHhhhcchHHHHH-hHHHHHHhcCCCCch---hHHHHHHHHHH-HHHHHHH
Q 012626 212 ELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILF-YAPVLFQSMGFKGDA---SLYSSAMTGAV-LASSTLI 286 (459)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~---~~~~~~~~~~~-~~~~~~~ 286 (459)
+++++.+....+.++...+.+.+..+.+...+...+.+.+-. |-....+.+-.+.+. .+......++. .++....
T Consensus 262 k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~ 341 (509)
T COG3202 262 KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFP 341 (509)
T ss_pred cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 112222444445444433344444444444433333222221 222221212222222 23334444555 4555667
Q ss_pred HHHHHHhhCCchhhhhhhHHHHHHHHH
Q 012626 287 SIATVDKLGRRALLISGGIQMITCQVI 313 (459)
Q Consensus 287 ~g~l~d~~~~~~~~~~~~~~~~~~~~~ 313 (459)
++.+.+|.|-....++.-+.+.+..++
T Consensus 342 ~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 342 GSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred hHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 888889988776665555555444433
No 271
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.58 E-value=0.0014 Score=60.07 Aligned_cols=127 Identities=18% Similarity=0.051 Sum_probs=84.9
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhh--HHHHH
Q 012626 262 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI--LVVVV 339 (459)
Q Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 339 (459)
+| +...+-+...++.+..+...+.+-|+.||+|-|.....+.....++..+=.....- ..+ +..+ +....
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p------~v~-~~f~~~l~~~G 146 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLP------FVP-PLFRRPLTHTG 146 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCc------ccc-ccchhhhhHHh
Confidence 56 66677788888999999999999999999999999999888888877664443210 000 1112 22222
Q ss_pred HHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012626 340 ICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 397 (459)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 397 (459)
..+......... .++.-...--+|+++|+++..+..+.+.+|.+++..+-..+..+.
T Consensus 147 q~iaa~Aq~Fim-~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 147 QSIAAAAQPFIL-GLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HHHHHHhhhHhh-ccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 222222222111 121233344579999999999999999999998888877776654
No 272
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.55 E-value=0.00096 Score=65.43 Aligned_cols=196 Identities=10% Similarity=-0.018 Sum_probs=127.7
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHH
Q 012626 233 LVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV 312 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 312 (459)
++.+..+..+........+....+.+-+.++++..+.|++....-++..+...+..+...|..|-+.+-++.+.++++.+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 34444444454444444455555555556999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhhcc--------------CC------------------Ccccc---chh---hhHHHHHHHHHHHHHhhccccc
Q 012626 313 IVSIILGLKF--------------GP------------------NQELS---KSF---SILVVVVICLFVLAFGWSWGPL 354 (459)
Q Consensus 313 ~~~~~~~~~~--------------~~------------------~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~ 354 (459)
+..+--...- .+ ..... ... .+..+++.-++.+....-..++
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 7765421110 00 00000 011 2222222222333333334556
Q ss_pred ccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc------------------c-chhHHHHHHHHHHHHHh
Q 012626 355 GWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF------------------K-FGIFLFFAGWVTIMTIF 415 (459)
Q Consensus 355 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~------------------~-~~~~~~~~~~~~l~~~~ 415 (459)
..+|+-|...++......|+..++..+|-++|-.+++.+...+ | |+..+++.+.+.+...+
T Consensus 258 GisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~ 337 (735)
T KOG3626|consen 258 GISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAV 337 (735)
T ss_pred CCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 6789999999888899999999998888887777777665421 1 44555666666666666
Q ss_pred heeeccCCCCCCH
Q 012626 416 VYFFLPETKGVPI 428 (459)
Q Consensus 416 ~~~~~~~~~~~~~ 428 (459)
.+++.|+...++.
T Consensus 338 p~f~fPk~lp~~~ 350 (735)
T KOG3626|consen 338 PLFFFPKELPKSQ 350 (735)
T ss_pred HHHhCcccCcccc
Confidence 6777776655543
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.54 E-value=0.0042 Score=57.16 Aligned_cols=157 Identities=14% Similarity=0.093 Sum_probs=98.6
Q ss_pred HhHHHHHHh-cCCCCchhHHHHHHHHH-HHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccc
Q 012626 253 FYAPVLFQS-MGFKGDASLYSSAMTGA-VLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSK 330 (459)
Q Consensus 253 ~~~~~~~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (459)
+..|++.+. +|++..+..--..+... ..++..+....+.|.++.|+.++.+.+...+...++.+.
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~------------- 91 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG------------- 91 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-------------
Confidence 344555554 88888776543333333 445566677889999999999998888777776665553
Q ss_pred hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc--cchhHHHHHHH
Q 012626 331 SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF--KFGIFLFFAGW 408 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~ 408 (459)
+....+.+.-+..+...+.-. ..++++=...|+++--++.+.......+|..++..++-.+.... .+.....+...
T Consensus 92 ~sv~~mq~~q~~yg~~~a~ev--ay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~ 169 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAAEV--AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLA 169 (412)
T ss_pred CcHHHHHHHHHHHHHHHHHHH--HHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 223333444444444433222 22345545668888888899999988888888887777666533 24444445555
Q ss_pred HHHHHHhheeeccCCC
Q 012626 409 VTIMTIFVYFFLPETK 424 (459)
Q Consensus 409 ~~l~~~~~~~~~~~~~ 424 (459)
...++++..+++|..+
T Consensus 170 ~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 170 SVSLALLIALFLPMPK 185 (412)
T ss_pred HHHHHHHHHHHcCCCC
Confidence 5555666656666544
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.50 E-value=0.012 Score=46.65 Aligned_cols=114 Identities=18% Similarity=0.129 Sum_probs=82.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHH
Q 012626 266 GDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVL 345 (459)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (459)
+.....-..+......+..++.+.+.+++|.|+.+.++.+...+-...... .+.+..+....+.+.
T Consensus 36 ~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~--------------~~~~~l~~~s~l~G~ 101 (156)
T PF05978_consen 36 AGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY--------------PNSYTLYPASALLGF 101 (156)
T ss_pred ccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh--------------hhHHHHHHHHHHHhh
Confidence 333444566667777788888999999999999999887766654443322 234556666677777
Q ss_pred HHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 012626 346 AFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLL 394 (459)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~ 394 (459)
+.+..+.... .++.+...++.+++..++.-.+...+..+|..+.-.+.
T Consensus 102 ~~a~lW~aqg-~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 102 GAALLWTAQG-TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hhHHhhHhhh-HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777664 67778888899999999988888888777776655443
No 275
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.48 E-value=0.001 Score=63.06 Aligned_cols=157 Identities=17% Similarity=0.184 Sum_probs=91.0
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhC-----CchhhhhhhHHHHHHHHHHHHHHhhccCCCcccc
Q 012626 255 APVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLG-----RRALLISGGIQMITCQVIVSIILGLKFGPNQELS 329 (459)
Q Consensus 255 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (459)
.+++.+++|.++.+.........+...+ .++.|.++|-+. ||..+.++..+..++...+.... . .
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~------~---~ 82 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP------A---S 82 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc------c---c
Confidence 3445566999998877766666555543 567899999872 44445555554444444443321 0 0
Q ss_pred chhhhHHHHHHHHHHHHHhhcccccccccccccCC--hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 012626 330 KSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFP--LETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAG 407 (459)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (459)
..+.....+.+++...+....-.. .-+.+.|... ++.++...+.......+|+.++..+.|.+.+..++...+.+.+
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~-aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~ 161 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVA-ADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISA 161 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHh-hhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHH
Confidence 111222222333333333333222 2345556652 2337888889999999999999999999999888766665555
Q ss_pred HHHHHHHh-heeeccC
Q 012626 408 WVTIMTIF-VYFFLPE 422 (459)
Q Consensus 408 ~~~l~~~~-~~~~~~~ 422 (459)
...++..+ ..+..+|
T Consensus 162 ~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 162 ALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHhhhh
Confidence 44444433 3333444
No 276
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.43 E-value=0.011 Score=56.13 Aligned_cols=128 Identities=8% Similarity=-0.050 Sum_probs=79.9
Q ss_pred chhHHHHHHHHHHHHHH-HHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc-----------cch---
Q 012626 267 DASLYSSAMTGAVLASS-TLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL-----------SKS--- 331 (459)
Q Consensus 267 ~~~~~~~~~~~~~~~~~-~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~--- 331 (459)
+...++.+...+...+. .++.+++++|++|++.+............++.+..... .+.-++ +.+
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~-~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPL-SDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcc-hhhcCCcHHHHHHHhhcchhhHH
Confidence 45566655555554444 77889999999999998877666666665555543211 000000 000
Q ss_pred -----hhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 332 -----FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 332 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
..|....+............+-+.|.+++|...+++..+-.++....+++|..+++.+..++.+
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111111222222222222223668899999999999999999999999999999999888763
No 277
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.27 E-value=0.03 Score=51.23 Aligned_cols=91 Identities=11% Similarity=0.018 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhh---hhhccccchhHHHHHhhh
Q 012626 82 NLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINY---GTQKLETWGWRLSLGLAA 158 (459)
Q Consensus 82 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~---~~~~~~~~gwr~~f~~~~ 158 (459)
.+...++.-.+.+.+.|......+...++. |++.-. -+..+.+++..+..++.. ........+=-.-|.+..
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ytq----avm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYTQ----AVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHHH----HHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHH
Confidence 456677777888888888777777766654 444332 223333343333333311 111111122223344444
Q ss_pred HHHHHHHHHHhccCCChHH
Q 012626 159 APALMMTVGGILLPETPNS 177 (459)
Q Consensus 159 ~~~~~~~~~~~~~~e~p~~ 177 (459)
+..+++++....+|+.|-.
T Consensus 191 ~~~llC~i~y~~l~~lpf~ 209 (406)
T KOG1479|consen 191 VILLLCFVLYLVLPKLPFV 209 (406)
T ss_pred HHHHHHHHHHHHhhcchHH
Confidence 4455555555567777743
No 278
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.98 E-value=0.041 Score=51.63 Aligned_cols=161 Identities=10% Similarity=-0.064 Sum_probs=84.3
Q ss_pred chHHHHHhHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCC
Q 012626 247 GINSILFYAPVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 325 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (459)
.--...+-.+.++.+ +.-+-.-.+.....-.+..++.....|...||..|.+.........-++...-.......+...
T Consensus 17 ~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~ 96 (432)
T PF06963_consen 17 GDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYP 96 (432)
T ss_pred HHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344555556666666 3334455566666777777888888899999999988876665544333322221111111111
Q ss_pred ccc--cchhhhHHHHHHHHHHHHHhhcccc----cccccccccC--ChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012626 326 QEL--SKSFSILVVVVICLFVLAFGWSWGP----LGWTVPSEIF--PLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSF 397 (459)
Q Consensus 326 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~ 397 (459)
... +.......+....+.+.....+... +-.-++..+. +++.....++...-+-.+...++|.+.|.+.+..
T Consensus 97 ~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~ 176 (432)
T PF06963_consen 97 SSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA 176 (432)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 000 0111111122222222211111111 1111222222 3456666777777777889999999999998877
Q ss_pred cchhHHHHHH
Q 012626 398 KFGIFLFFAG 407 (459)
Q Consensus 398 ~~~~~~~~~~ 407 (459)
++.....+.+
T Consensus 177 s~~~~~~~i~ 186 (432)
T PF06963_consen 177 SPVIAAIFIA 186 (432)
T ss_pred CHHHHHHHHH
Confidence 7554444333
No 279
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.97 E-value=0.0083 Score=41.48 Aligned_cols=69 Identities=10% Similarity=0.057 Sum_probs=58.1
Q ss_pred HHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHH
Q 012626 249 NSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 317 (459)
Q Consensus 249 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (459)
+.++-..|.+.++.++|..+.+++.+...++.++|.+...++.++.++++.+..+.+...+....+.+.
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556788889999999999999999999999999999999888777888888877777777666654
No 280
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.92 E-value=0.00018 Score=64.92 Aligned_cols=116 Identities=9% Similarity=-0.070 Sum_probs=2.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-CCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhc
Q 012626 272 SSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWS 350 (459)
Q Consensus 272 ~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (459)
....+.++..+|+.+.++..-+. ++|++. +..+.-.+..-++............+..-.+.+..++...+++...+ .
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNG-y 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNG-Y 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccc-h
Confidence 46678889999999887643221 234333 22222221111111110000000000011223344444444444444 3
Q ss_pred ccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHH
Q 012626 351 WGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQI 389 (459)
Q Consensus 351 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 389 (459)
...+...+..+..++++|..+..+...+-.+|-.+|..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556777888888888888777777766666665544
No 281
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.54 E-value=0.0018 Score=59.33 Aligned_cols=159 Identities=14% Similarity=0.074 Sum_probs=98.6
Q ss_pred hHHHHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh----hCCchhhhhhhH-
Q 012626 231 PQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDK----LGRRALLISGGI- 305 (459)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~- 305 (459)
++++....+.....+ ++..-..|.|.+.+..|.+..-.+.......+.+++.+++.|..+|| +||||..+....
T Consensus 32 ~~li~v~~ia~Gvqf-~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQF-GWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 334444444444443 45666677788888899998888888888888999999999999996 688877665444
Q ss_pred HHHHHHHHHHHHHhh--ccCCCccccc--hhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhh-hhHHHHHHHH
Q 012626 306 QMITCQVIVSIILGL--KFGPNQELSK--SFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSA-GQSITVAVNL 380 (459)
Q Consensus 306 ~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~g~~~~~~~ 380 (459)
...++.+++....-. ...++...+. ......++...+.-........|. -++..|+..++++.+ +++....+..
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~-ra~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPC-RALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhH-HHHHHHhccChhhhhccchhHHHHHH
Confidence 444444444333211 1111111111 111222333334444444555565 578889987776666 9999999988
Q ss_pred HHHHHHHHHHH
Q 012626 381 FFTFVIAQIFL 391 (459)
Q Consensus 381 ~g~~~~~~~~~ 391 (459)
+|+.++-...+
T Consensus 190 vGnvLGY~~g~ 200 (498)
T KOG0637|consen 190 VGNVLGYALGS 200 (498)
T ss_pred hcceeeeeccc
Confidence 88876655554
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.52 E-value=0.08 Score=49.82 Aligned_cols=98 Identities=18% Similarity=0.240 Sum_probs=76.7
Q ss_pred HHHHHHhhhhhhhhhh---hccchhHHHHHHHHHHHHHHHHHHH------------------HhHHHHHHHHHHHhhccc
Q 012626 40 YLAGLVASFVASPVTR---DYGRRASIICGGISFLLGAALNAAA------------------ANLAMLLTGRILLGVGIG 98 (459)
Q Consensus 40 ~l~~~i~~~~~g~l~d---r~Grr~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~~ 98 (459)
.+|..+++.+.+.+++ |+||++.+.++..+..++.++..+. +++...++.-++.|++-+
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~ 368 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA 368 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence 3444555555666665 5899999999999999888887654 245677778899999999
Q ss_pred ccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHH
Q 012626 99 FGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMI 138 (459)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 138 (459)
......+.++.+.. +++|..+.++...-..++..++...
T Consensus 369 ~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 369 CFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999 6778999999888888877765444
No 283
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.38 E-value=0.25 Score=45.40 Aligned_cols=184 Identities=12% Similarity=0.117 Sum_probs=81.1
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHH
Q 012626 234 VMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 313 (459)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 313 (459)
.+.+++........++.+.+-.+++.+.+-.+.. ...+.....+...+..++...+--+...|....++..+.....++
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~ 98 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILF 98 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555566666777888888888776433333 444455555555555555555544444333333333322222222
Q ss_pred HHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 012626 314 VSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTL 393 (459)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~ 393 (459)
......... ..........+..+....+...+.+...+.+ +-.. ..+|++.....++=.+..+.+.+ +...+....
T Consensus 99 i~~l~~~~v-~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~-~G~a-~~~P~~ytqavm~G~a~aG~l~S-l~~i~tka~ 174 (406)
T KOG1479|consen 99 IVTLDLALV-KTDTWTNGFFLVTLIIVVLLNLANAVVQGSL-YGLA-GLFPSEYTQAVMSGQALAGTLTS-LLRILTKAA 174 (406)
T ss_pred HHHHHHHhh-ccCCccchhHHHHHHHHHHHhhhhhhhccch-hhhh-hcCCHHHHHHHHhcchhHhHHHH-HHHHHHHHh
Confidence 221111110 0111111222333333444444444444433 3443 55677765444333333332222 222222222
Q ss_pred Hhh--ccchhHHHHHHHHHHHHHhheeeccC
Q 012626 394 LCS--FKFGIFLFFAGWVTIMTIFVYFFLPE 422 (459)
Q Consensus 394 ~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~ 422 (459)
.+. .+-..++....+..+++++++...++
T Consensus 175 ~~~~~~sA~~yF~~s~~~~llC~i~y~~l~~ 205 (406)
T KOG1479|consen 175 FSDSRTSALIYFITSTVILLLCFVLYLVLPK 205 (406)
T ss_pred cCCCCceeehhHHHHHHHHHHHHHHHHHhhc
Confidence 222 22344555566666666666664443
No 284
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.36 E-value=0.18 Score=45.18 Aligned_cols=134 Identities=17% Similarity=0.128 Sum_probs=82.8
Q ss_pred HHHhHHHHHHhcCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccc
Q 012626 251 ILFYAPVLFQSMGFKG--DASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQEL 328 (459)
Q Consensus 251 ~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (459)
.....+.+..+.+.+. ...+.......+...++.+..|++.||.|||+.+..+......+.+......
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~---------- 90 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP---------- 90 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc----------
Confidence 3344555555555554 3678888888888888889999999999999776666554333322222210
Q ss_pred cchhhhHHHHHHHHHHHHHhhcccccccccccccCCh-hhhhhhhHHHHH-HHHHHHHHHHHHHHHHHhh
Q 012626 329 SKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPL-ETRSAGQSITVA-VNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~-~~~~g~~~~~~~~~~~~~~ 396 (459)
....+.........+...+ ...+....+..|..|. +.|+...+.... ...++..+++.+.+.+...
T Consensus 91 -~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 91 -NVGLALLLILRLLQGLGGG-GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred -cchHHHHHHHHHHHHhhhH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112222222222233333 3344456778888887 578888888888 5777888888776666554
No 285
>PRK03612 spermidine synthase; Provisional
Probab=96.27 E-value=0.11 Score=50.61 Aligned_cols=136 Identities=15% Similarity=0.085 Sum_probs=76.7
Q ss_pred cccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHH--HH-HHHHHH----HHHHhH-HHHHHHHHHHhhc
Q 012626 25 CKYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGIS--FL-LGAALN----AAAANL-AMLLTGRILLGVG 96 (459)
Q Consensus 25 ~~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~--~~-~~~~~~----~~~~~~-~~l~~~r~l~G~~ 96 (459)
+|-+..+.+.+.+++.+|.++|+.+.+++.++--|+. ...-+.+ .+ ++..+. ++...+ ..++..-++.++.
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l 123 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLL 123 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888999999999999999999988874433332 2221111 11 111111 111111 2233444667788
Q ss_pred ccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHH
Q 012626 97 IGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALM 163 (459)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~ 163 (459)
.|+..|....+..+... ++-++..|-......+|.++|+++.. ..+....|-....++.+.+.++
T Consensus 124 ~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~-~vLlp~lG~~~t~~~~a~l~~~ 188 (521)
T PRK03612 124 IGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFP-FLLLPRLGLIRTAALTGSLNLL 188 (521)
T ss_pred HHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHH
Confidence 88888877776655332 23456677777777888888877742 2223333433333344444333
No 286
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.24 E-value=0.067 Score=49.40 Aligned_cols=108 Identities=15% Similarity=0.071 Sum_probs=80.7
Q ss_pred CchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHH-----HHHHHHHHHHHHhHHHHHHHHHHHhhcccccch
Q 012626 28 DNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGIS-----FLLGAALNAAAANLAMLLTGRILLGVGIGFGNQ 102 (459)
Q Consensus 28 s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 102 (459)
..++..+....|.+|..++.--...+ |+ |++.+.+.+- ..+.....-+.+|.|..++.-+..|+..|..+.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 45677788888888877765432221 33 4443333322 222223344568899999999999999999999
Q ss_pred hhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHh
Q 012626 103 AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 103 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 139 (459)
.....+.|-.|+++|..+++..+.+.++|..++..++
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999884
No 287
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.00 E-value=2 Score=41.34 Aligned_cols=116 Identities=14% Similarity=0.052 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhc---cCCCc-------cccchhh--------hHHHHHHH
Q 012626 280 LASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLK---FGPNQ-------ELSKSFS--------ILVVVVIC 341 (459)
Q Consensus 280 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~--------~~~~~~~~ 341 (459)
.++..++-.++++++++.+++.+..........+.++..+.. ..++. ..+.... |...+..+
T Consensus 72 a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv 151 (491)
T PF03219_consen 72 AILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYV 151 (491)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHH
Confidence 344456678999999999988776666665555555543211 00100 0000000 11111111
Q ss_pred HHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 342 LFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
..-.-.....+-+-|.+++|..+.++..+..++....+++|..+++.+...+.+
T Consensus 152 ~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 152 MAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111222233458899999999999999999999999999999998888776
No 288
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.95 E-value=1.7 Score=42.82 Aligned_cols=160 Identities=9% Similarity=-0.003 Sum_probs=94.3
Q ss_pred hHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-CCchhhhhhhHHHHHHHHHHHHHHhhccC-C-------
Q 012626 254 YAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKL-GRRALLISGGIQMITCQVIVSIILGLKFG-P------- 324 (459)
Q Consensus 254 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 324 (459)
...++...++.+...+.-.............+++++++|.+ ||.+.+.++..+..++..++......... +
T Consensus 60 lv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~ 139 (571)
T KOG1237|consen 60 LVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKP 139 (571)
T ss_pred HHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCC
Confidence 34444455777776666667777777777788899999975 88899999888888887666655433211 1
Q ss_pred Cc-cccchhh-hHHHHH-HHHHHHHHhhcccccccccccccCCh----hhh--hhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 012626 325 NQ-ELSKSFS-ILVVVV-ICLFVLAFGWSWGPLGWTVPSEIFPL----ETR--SAGQSITVAVNLFFTFVIAQIFLTLLC 395 (459)
Q Consensus 325 ~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~--~~~~g~~~~~~~~g~~~~~~~~~~~~~ 395 (459)
.. ..+.... ...++. ..........+.-+...++-+|-++. +.+ ..-+.......+.|..++..+..++.+
T Consensus 140 ~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~ 219 (571)
T KOG1237|consen 140 GGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD 219 (571)
T ss_pred CCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 00 0011111 111222 22222222334444445666777762 222 255667777788888888888888877
Q ss_pred hccchhHHHHHHHHHHHH
Q 012626 396 SFKFGIFLFFAGWVTIMT 413 (459)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~ 413 (459)
+.+|...+....++..++
T Consensus 220 ~~~w~lgf~i~~~~~~la 237 (571)
T KOG1237|consen 220 NVGWKLGFGIPTVLNALA 237 (571)
T ss_pred cccceeeccHHHHHHHHH
Confidence 777655444444443333
No 289
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.75 E-value=0.16 Score=47.34 Aligned_cols=120 Identities=8% Similarity=-0.010 Sum_probs=77.7
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhhHHHHHHHHHHHHHhhcccccccccccccCChh---hhhhhhHH
Q 012626 298 ALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLE---TRSAGQSI 374 (459)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~ 374 (459)
|.+..+.+...++.+++.+....... .+........+.+.+...+.+ +.-|....+..|.++++ .|.+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~----~~~~~~~~~~~gL~lia~G~G-~~K~ni~~~~~dq~~~~~~~~~~~~F~~ 76 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSL----PSGIQLGLFYIGLALIAVGTG-GIKPNISPFGADQYDEDDDSRRDSFFNW 76 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC----------CHHHHHHHHHHHHHH-CCHHHHHHHHHHCSSTTTTTHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchh----hhhHHHHHHHHHHHHHHhccc-cccccHHHHHHHHhcccchhhhhhhHHH
Confidence 45667777777777776555321111 111122344444455555544 44444457778888654 56677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHhheeeccC
Q 012626 375 TVAVNLFFTFVIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLPE 422 (459)
Q Consensus 375 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 422 (459)
.....++|..++..+.+++.++.+|...+.+..++.+++++.+...++
T Consensus 77 fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 77 FYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 888999999999999999999999999999888888888777665543
No 290
>PRK03612 spermidine synthase; Provisional
Probab=94.69 E-value=1.3 Score=43.24 Aligned_cols=142 Identities=12% Similarity=0.062 Sum_probs=67.4
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHH---HHHHHHhhccCCCccccchhhhHHHH
Q 012626 262 MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQV---IVSIILGLKFGPNQELSKSFSILVVV 338 (459)
Q Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (459)
.|.+....+.+.+.+..+..+|+.+++++.++..++... .-..+..++.+ ++...... ..........
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~-~e~~i~l~~~~~~~ll~~~~~~--------~~~~~~~~~~ 115 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA-VELLLALLGGLSALILYAAFAF--------QGLSRLLLYV 115 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHH
Confidence 677777777777788888888888877765332222211 11111111111 11111000 0011111122
Q ss_pred HHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHh-hccc-hhHHHHHHHHHHHHH
Q 012626 339 VICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLC-SFKF-GIFLFFAGWVTIMTI 414 (459)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~~~ 414 (459)
..++..+..+.. .|+..-+..+. ..+..+...|-.+....+|+++|+.+.+.+.- ..|. ...+..+.+..++++
T Consensus 116 ~~~~~~~l~G~~-~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 116 LVLLIGLLIGME-IPLLMRILQRI-RDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhc-cccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 222223333322 33322222221 11224567788889999999999999887654 4553 333444444444443
No 291
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.68 E-value=3.9 Score=38.77 Aligned_cols=131 Identities=8% Similarity=-0.103 Sum_probs=80.2
Q ss_pred CCchhHHHHHHHHH-HHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCcccc----------c--h
Q 012626 265 KGDASLYSSAMTGA-VLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELS----------K--S 331 (459)
Q Consensus 265 ~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~ 331 (459)
+++...++-...-+ +.++..++..++.++..+.+.+...........+++++..+... +.-+.+ . .
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~-~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYK-DILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccc-cccCCCHHHHHHHHhhCCcc
Confidence 34445555444444 55666777888899999988887776666666666665543111 100000 0 0
Q ss_pred --------hhhHHHHHHHHHHHHHhhcccccccccccccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 332 --------FSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCS 396 (459)
Q Consensus 332 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~ 396 (459)
+.|.........-.-.....+-+-|..++|....++..+-+++.+...+++..++..+..++..+
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 00222222222222222222334577889999999999999999999999999999988887663
No 292
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.29 E-value=2.7 Score=37.53 Aligned_cols=98 Identities=21% Similarity=0.319 Sum_probs=66.8
Q ss_pred HHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHHhccCC--Ccc
Q 012626 40 YLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPT--HLR 117 (459)
Q Consensus 40 ~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~r 117 (459)
++..+..+++.+.+..++|-|.++.++...+...... =+-+.+..++-.-.+.|++.+..+..--+|+++.-.. ++|
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~ 146 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQR 146 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhh
Confidence 3445566667778899999999999888776543322 2346788999999999999999998887777766532 233
Q ss_pred -------------hHHHHHHHHHHHHHHHHHHHH
Q 012626 118 -------------GGLNMMFQLATTLGIFTANMI 138 (459)
Q Consensus 118 -------------~~~~~~~~~~~~~G~~~g~~~ 138 (459)
+..+.+++.....|..+...+
T Consensus 147 ~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 147 GEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred hhhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 234445555555555554443
No 293
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.02 E-value=0.034 Score=48.42 Aligned_cols=132 Identities=14% Similarity=0.055 Sum_probs=81.4
Q ss_pred HHHHHhHHHHHHHhhhhhhhhhhhc--cchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHHh
Q 012626 33 AAFTSSLYLAGLVASFVASPVTRDY--GRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSE 110 (459)
Q Consensus 33 ~~~~s~~~l~~~i~~~~~g~l~dr~--Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 110 (459)
|.+.-+-.+-..+-.+......||+ |.|. .+..++.+.+..+.++++|.++-+.+-.+..++.|.....-.++.+.
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~ 142 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR 142 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc
Confidence 4444444455556666666777885 4443 44556677778888899999999999999988888776655554433
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhcc
Q 012626 111 MAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL 171 (459)
Q Consensus 111 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (459)
+ ++ ...+-++.+.+.+.++|..--.......+..-|...++...+.++..+..+++
T Consensus 143 Y-~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 143 Y-PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred C-CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhe
Confidence 3 22 23444555555555666544111222134567888888777766666666554
No 294
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.66 E-value=2.5 Score=40.27 Aligned_cols=31 Identities=16% Similarity=0.333 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHhhcccccccccccccCChhhhh
Q 012626 337 VVVICLFVLAFGWSWGPLGWTVPSEIFPLETRS 369 (459)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 369 (459)
+...++.+.+.+...+.. ..++ ..+|++..+
T Consensus 110 ~~~v~~~g~~~~~~q~s~-~gla-~~fp~~~~~ 140 (437)
T TIGR00939 110 MASVVIINSGMALLQGSL-FGLA-GVFPSTYSS 140 (437)
T ss_pred HHHHHHHHhhhhhhcccc-hhhc-ccCCHHHHH
Confidence 333344444444444333 4553 567866543
No 295
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.11 E-value=1.1 Score=42.37 Aligned_cols=52 Identities=19% Similarity=0.069 Sum_probs=29.3
Q ss_pred HhHHHHHHh--cCCCCchhHHH---HHHHHHHHHHHHHHHHHHHHhhCCchhhhhhh
Q 012626 253 FYAPVLFQS--MGFKGDASLYS---SAMTGAVLASSTLISIATVDKLGRRALLISGG 304 (459)
Q Consensus 253 ~~~~~~~~~--~g~~~~~~~~~---~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 304 (459)
.-.|.++++ .+.+-.+.+.. .-++++=-+-+.++=....+|+||||.-++-.
T Consensus 21 gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~ 77 (544)
T PF13000_consen 21 GSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPI 77 (544)
T ss_pred ccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHH
Confidence 456777776 56655554432 22333333334444445566889998866543
No 296
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=93.09 E-value=0.073 Score=47.78 Aligned_cols=31 Identities=13% Similarity=0.128 Sum_probs=25.2
Q ss_pred cccccccCChhhhhhhhHHHHHHHHHHHHHH
Q 012626 356 WTVPSEIFPLETRSAGQSITVAVNLFFTFVI 386 (459)
Q Consensus 356 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 386 (459)
.-...|..|.++|..+.|+.+........+-
T Consensus 408 tqimQe~VpEseR~vv~gvqnsL~~~ldll~ 438 (503)
T KOG2601|consen 408 TQIMQETVPESERCVVFGVQNSLNSALDLLK 438 (503)
T ss_pred HHHHHHhcchhhhhhhHhHHHHHHHHHHHHH
Confidence 3556899999999999999999988766433
No 297
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.05 E-value=1.4 Score=40.14 Aligned_cols=62 Identities=21% Similarity=0.154 Sum_probs=34.2
Q ss_pred HHHHhhhcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHH-----hhCCchhhhhh
Q 012626 239 MPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVD-----KLGRRALLISG 303 (459)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~~~~~~ 303 (459)
.....+...+.... -.|.+++..|.|-+..+.......=. --.++...+.| |+||||.-+.-
T Consensus 38 ~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 38 FLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred HHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccceeee
Confidence 33444554545444 78999887777655544332222111 12344555556 99999876544
No 298
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=92.04 E-value=7 Score=33.34 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHH
Q 012626 275 MTGAVLASSTLISIATVDKLGRRALLISGGIQMITC 310 (459)
Q Consensus 275 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 310 (459)
...++..++.+-+-.++.|+..|++.+++..+..+.
T Consensus 248 GH~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 248 GHALCTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 344555555555557788999888887776655444
No 299
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.97 E-value=4.5 Score=35.12 Aligned_cols=132 Identities=13% Similarity=0.119 Sum_probs=85.1
Q ss_pred hHHHHHHhHHHHHHHhhhhhhhhhhhccch--hHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHHHHhhcccccc
Q 012626 31 GLAAFTSSLYLAGLVASFVASPVTRDYGRR--ASIICGGISFLLGAALNAAAA-------NLAMLLTGRILLGVGIGFGN 101 (459)
Q Consensus 31 ~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr--~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~ 101 (459)
-.|.+.+.++++..+|+-+..++..|-..| +.+.+..++.+....+..+.. +...=+++-.+.-.+.|..+
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 358999999999999999988888776554 455555555555444433321 12222444455556678899
Q ss_pred hhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccc--cchhHHHHHhhhHHHHHHHH
Q 012626 102 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMINYGTQKLE--TWGWRLSLGLAAAPALMMTV 166 (459)
Q Consensus 102 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~--~~gwr~~f~~~~~~~~~~~~ 166 (459)
|....+-+++.|++.|...+.++..-.++=..++ + .....+ ..+-|..|-++.+...+..+
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClv--L--ynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLV--L--YNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhh--h--eecccccCccccchhhhhhHHHHHHHHH
Confidence 9999999999999999999888876544322221 1 111111 13567778777776665543
No 300
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=89.78 E-value=1.5 Score=38.73 Aligned_cols=117 Identities=12% Similarity=0.066 Sum_probs=82.4
Q ss_pred CccccCc-hhHHHHHHhHHHHHHHhhhhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccc
Q 012626 23 NYCKYDN-QGLAAFTSSLYLAGLVASFVASPVTRDY-GRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFG 100 (459)
Q Consensus 23 ~~~~~s~-~~~~~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 100 (459)
+.+..+. .|.-|....|.+|..+..--.-..--++ ---.++..-.+++.+...+..+.++++..++.-+.-|+-.|..
T Consensus 280 ~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGas 359 (409)
T KOG3880|consen 280 HGFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGAS 359 (409)
T ss_pred cCCccchhhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchH
Confidence 4444543 3477888888877554432221111110 0012233344555556666778899999999999999998999
Q ss_pred chhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHh
Q 012626 101 NQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 101 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 139 (459)
++...--+.+-.++++|-.+++....+-++|..++..++
T Consensus 360 YVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 360 YVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 888888888888899999999999999999999998883
No 301
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=87.40 E-value=6.8 Score=33.90 Aligned_cols=59 Identities=5% Similarity=0.014 Sum_probs=31.0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHH----H--hhccchhHHHHHHHHHHHHHhheeeccCCC
Q 012626 366 ETRSAGQSITVAVNLFFTFVIAQIFLTL----L--CSFKFGIFLFFAGWVTIMTIFVYFFLPETK 424 (459)
Q Consensus 366 ~~~~~~~g~~~~~~~~g~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 424 (459)
-.|..+.|+...+.+....+.....+.. . +.......-++..++.+++..++.+.+.+.
T Consensus 75 ii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 4556666666666665555555444321 0 111123444555556666666666665443
No 302
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=85.61 E-value=6.1 Score=37.01 Aligned_cols=18 Identities=6% Similarity=0.023 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHhhC
Q 012626 278 AVLASSTLISIATVDKLG 295 (459)
Q Consensus 278 ~~~~~~~~~~g~l~d~~~ 295 (459)
+..++..+..|++..|.+
T Consensus 6 i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 334444555666666653
No 303
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=85.22 E-value=30 Score=31.58 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHHHHhheeecc
Q 012626 385 VIAQIFLTLLCSFKFGIFLFFAGWVTIMTIFVYFFLP 421 (459)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 421 (459)
.-..+.+....+......+.++.++++++++++..-+
T Consensus 271 ~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 271 FYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 3444555555455556666666666777776665444
No 304
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=82.81 E-value=0.39 Score=40.88 Aligned_cols=16 Identities=6% Similarity=0.615 Sum_probs=0.0
Q ss_pred HHHHhheeeccCCCCC
Q 012626 411 IMTIFVYFFLPETKGV 426 (459)
Q Consensus 411 l~~~~~~~~~~~~~~~ 426 (459)
.++++++.++++.+..
T Consensus 176 FlaiLIWlY~H~~~~~ 191 (381)
T PF05297_consen 176 FLAILIWLYVHDQRHA 191 (381)
T ss_dssp ----------------
T ss_pred HHHHHHHHHhcCCCCC
Confidence 4455667777766643
No 305
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=81.85 E-value=43 Score=31.01 Aligned_cols=143 Identities=9% Similarity=-0.036 Sum_probs=64.2
Q ss_pred HHHHHh-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHHHHHHhhccCCCccccchhhh
Q 012626 256 PVLFQS-MGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPNQELSKSFSI 334 (459)
Q Consensus 256 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (459)
..++.. .|-+..-.+....+-+...++...+.|...|+..|+|.+.......-++..+.+......+...+..+...++
T Consensus 51 sL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv 130 (503)
T KOG2601|consen 51 SLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPV 130 (503)
T ss_pred HHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccH
Confidence 334444 3333334444444445555555556677779999988876655544333333332221111111111112222
Q ss_pred HH-HHHHHHHHHHHhhccccc-------ccccc-cccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012626 335 LV-VVVICLFVLAFGWSWGPL-------GWTVP-SEIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK 398 (459)
Q Consensus 335 ~~-~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 398 (459)
.. ...+.......+-..... -|..+ +|-=++.......+.....-.....+.|.+.|.+....+
T Consensus 131 ~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvs 203 (503)
T KOG2601|consen 131 FTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVS 203 (503)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeec
Confidence 11 111111111111111100 01111 122233344444466666677778889999988876554
No 306
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=81.22 E-value=0.32 Score=41.43 Aligned_cols=39 Identities=13% Similarity=0.041 Sum_probs=29.5
Q ss_pred cccCchhHHHHHHhHHHHHHHhhhhhhhh---------hhhccchhHH
Q 012626 25 CKYDNQGLAAFTSSLYLAGLVASFVASPV---------TRDYGRRASI 63 (459)
Q Consensus 25 ~~~s~~~~~~~~s~~~l~~~i~~~~~g~l---------~dr~Grr~~~ 63 (459)
.++++.....+.-+..+.-++..++.|.. .||+|||+..
T Consensus 47 iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 47 IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 36777777788888888888888887754 4689988754
No 307
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=77.21 E-value=22 Score=30.80 Aligned_cols=25 Identities=8% Similarity=-0.211 Sum_probs=14.7
Q ss_pred chhHHHHHhhhHHHHHHHHHHhccC
Q 012626 148 WGWRLSLGLAAAPALMMTVGGILLP 172 (459)
Q Consensus 148 ~gwr~~f~~~~~~~~~~~~~~~~~~ 172 (459)
....+.-++..++.++...++.+++
T Consensus 112 ~~~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 112 PSSPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred cchhHHHHHHHHHHHHHHHheeeec
Confidence 3455556666666666666665553
No 308
>COG1288 Predicted membrane protein [Function unknown]
Probab=75.50 E-value=53 Score=30.88 Aligned_cols=109 Identities=15% Similarity=0.139 Sum_probs=53.8
Q ss_pred cchhHH-HHHHHHHHHHHHHHHHHHhHHHHHHHH--HHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHH
Q 012626 58 GRRASI-ICGGISFLLGAALNAAAANLAMLLTGR--ILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFT 134 (459)
Q Consensus 58 Grr~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~r--~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 134 (459)
||...+ .+-..+++++...++..+..-.++-.- .+...|.-........+++ .+-|.+.+..+ ..+..+
T Consensus 132 G~e~llI~~l~ilFslgGt~~Gm~EEaiaFypIliPv~ialGyDsi~~va~i~lg-----t~iG~~~St~N---PF~~~I 203 (481)
T COG1288 132 GKEFLLIPVLFILFSLGGTVFGMGEEAIAFYPILIPLMVALGYDSITGVAIIYIG-----TQIGFAASTMN---PFATVI 203 (481)
T ss_pred CCeEEEeeHHHHHHHhccccccchHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH-----hccchhhhhcC---chHHHH
Confidence 554433 345566677777777665432222111 2222232222233333332 22333333332 333344
Q ss_pred HHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhc--cCCCh
Q 012626 135 ANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGIL--LPETP 175 (459)
Q Consensus 135 g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~--~~e~p 175 (459)
+.-++ +....+..+||...|+......+..+.++. ++++|
T Consensus 204 Aq~iA-Gip~~sG~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP 245 (481)
T COG1288 204 AQNIA-GIPFLSGMGLRIVVWVVFTLISIIYVYWYASKVKKDP 245 (481)
T ss_pred Hhhhc-CCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 44443 445566789999999988776666655543 45555
No 309
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=73.37 E-value=98 Score=30.48 Aligned_cols=26 Identities=8% Similarity=0.125 Sum_probs=13.1
Q ss_pred CCchHHHhcccchhHHHHHHHHHHHhh
Q 012626 218 KHPFRNILERRNRPQLVMAIFMPMFQI 244 (459)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (459)
|.-..|.+|.+.... ++..++....+
T Consensus 248 KlvhgDVFR~P~~~~-lls~lvG~G~Q 273 (521)
T PF02990_consen 248 KLVHGDVFRPPKHPM-LLSALVGTGIQ 273 (521)
T ss_pred hhhhHHHhcCcCCch-HHHhHhcchhh
Confidence 344467787776443 33344433333
No 310
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=72.71 E-value=47 Score=28.95 Aligned_cols=103 Identities=16% Similarity=0.110 Sum_probs=56.4
Q ss_pred HHHHHhHHHHHHHhhhhhhhhhhh-ccchhHHH----HHHHHHHHHHHHHHH-H----HhHHHHHHHHHHHhhcccccch
Q 012626 33 AAFTSSLYLAGLVASFVASPVTRD-YGRRASII----CGGISFLLGAALNAA-A----ANLAMLLTGRILLGVGIGFGNQ 102 (459)
Q Consensus 33 ~~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~~~~~~ 102 (459)
....-.+..|..+|.+..|++... +-||+.+. .+++++.++.+.... . .++..+++.-++.|+..=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 444555666777888888888764 55666544 345555554444212 1 2456677778888876543433
Q ss_pred hhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHH
Q 012626 103 AVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTAN 136 (459)
Q Consensus 103 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 136 (459)
+.. .+..-+++.++.+.--.++..+++|.++-.
T Consensus 224 ViL-~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yT 256 (267)
T PF07672_consen 224 VIL-NLPHEYKGYNPKKIGIQFGLIWGFGYIFYT 256 (267)
T ss_pred HHh-cChhhhcCCCcceehhHHHHHHHHHHHHHH
Confidence 322 222333333334444455556677766543
No 311
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.04 E-value=4.1 Score=29.29 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=29.2
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012626 365 LETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK 398 (459)
Q Consensus 365 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 398 (459)
++.++.+.++-...-.+++.+.....|++.|++-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567888888888889999999999999999875
No 312
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.89 E-value=31 Score=24.97 Aligned_cols=33 Identities=9% Similarity=-0.271 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHhh-CCchhhhhhhHHHHHH
Q 012626 278 AVLASSTLISIATVDKL-GRRALLISGGIQMITC 310 (459)
Q Consensus 278 ~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~ 310 (459)
+++++.....||+.||+ +.++..++.+++...+
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 34444455678999997 5555554444444333
No 313
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=70.53 E-value=15 Score=33.42 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=77.5
Q ss_pred HHHHHHhHHHHHHHhhhhhhhhhhhccchh--HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHH
Q 012626 32 LAAFTSSLYLAGLVASFVASPVTRDYGRRA--SIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLS 109 (459)
Q Consensus 32 ~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 109 (459)
-|..-++..+..+++.+..|.+.-++.|.. .+..+.+..+...++++.++++|..+++-++.+.-.....+++..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 356667778888999999999988887764 344455555555556667788998888888888888888888888899
Q ss_pred hccCCCcchHHHHHHHHHHHHHHHHHHHH
Q 012626 110 EMAPTHLRGGLNMMFQLATTLGIFTANMI 138 (459)
Q Consensus 110 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 138 (459)
+...++.-|..+|+... ++.++-.++
T Consensus 353 ~nL~~e~~gLvFGiNTF---vAl~lQsil 378 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTF---VALILQSIL 378 (433)
T ss_pred HhhhhhhheeeeehHHH---HHHHHHHhh
Confidence 88888888888887764 344444444
No 314
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=69.09 E-value=1.7 Score=39.24 Aligned_cols=105 Identities=15% Similarity=0.140 Sum_probs=3.8
Q ss_pred HHHhHHHHHHHhhhhhhhhhhh-ccchhHHHH--HHHHHHHHHHHH----------HHHHhHHHHHHHHHHHhhcccccc
Q 012626 35 FTSSLYLAGLVASFVASPVTRD-YGRRASIIC--GGISFLLGAALN----------AAAANLAMLLTGRILLGVGIGFGN 101 (459)
Q Consensus 35 ~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~--~~~~~~~~~~~~----------~~~~~~~~l~~~r~l~G~~~~~~~ 101 (459)
....+.++-.+|..+.++.-=+ -.+|++... .-+++....++| .+.+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4556777777887776653211 134444333 222222222333 123456778888999999999999
Q ss_pred hhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHh
Q 012626 102 QAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 102 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 139 (459)
+.+..+..+..++++|..+-.+...+..+|..+|..++
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp HHHH----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988874
No 315
>PRK11588 hypothetical protein; Provisional
Probab=65.53 E-value=1.4e+02 Score=29.11 Aligned_cols=41 Identities=17% Similarity=0.003 Sum_probs=24.2
Q ss_pred hhhhhhhccchh--HHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 012626 50 ASPVTRDYGRRA--SIICGGISFLLGAALNAAAANLAMLLTGR 90 (459)
Q Consensus 50 ~g~l~dr~Grr~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 90 (459)
.+++.+|++.|. ++.+.+++++++....++++....++-.-
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~pi~ 178 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAIII 178 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 366778886653 34445566666666667766554444333
No 316
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=60.85 E-value=46 Score=32.20 Aligned_cols=39 Identities=10% Similarity=0.146 Sum_probs=21.9
Q ss_pred HHHHHhcCC-CCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012626 256 PVLFQSMGF-KGDASLYSSAMTGAVLASSTLISIATVDKL 294 (459)
Q Consensus 256 ~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 294 (459)
..++.-+|+ ++..-|.+.+...+..++..+.+|+.+.|+
T Consensus 347 ti~fA~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 347 TIFFACLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred HHHHHHhccCCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 334444443 555555555555566666666667666654
No 317
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=59.54 E-value=1.1e+02 Score=25.76 Aligned_cols=16 Identities=19% Similarity=0.303 Sum_probs=8.6
Q ss_pred hHHHHHHHhhhhhhhh
Q 012626 38 SLYLAGLVASFVASPV 53 (459)
Q Consensus 38 ~~~l~~~i~~~~~g~l 53 (459)
....++.+|..+.+.+
T Consensus 54 ~~i~~F~~G~~~~~~i 69 (209)
T PF06912_consen 54 LAILSFILGAFLAGLI 69 (209)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344455566666655
No 318
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=55.09 E-value=62 Score=25.52 Aligned_cols=52 Identities=19% Similarity=0.155 Sum_probs=37.1
Q ss_pred HhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Q 012626 81 ANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTA 135 (459)
Q Consensus 81 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 135 (459)
+++..++..-.+.|+|. ..+.+.+++--.++++.|..+|+-.+-.+++-+.-
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 34556666666666653 34667778888888888999999988888876543
No 319
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=52.76 E-value=1.1e+02 Score=29.53 Aligned_cols=16 Identities=6% Similarity=-0.068 Sum_probs=8.7
Q ss_pred HHHHHHhhCCchhhhh
Q 012626 287 SIATVDKLGRRALLIS 302 (459)
Q Consensus 287 ~g~l~d~~~~~~~~~~ 302 (459)
...+.+|+++|+...+
T Consensus 104 v~~l~k~l~~~~~~~I 119 (465)
T PF03606_consen 104 VNLLIKPLKGKKNPLI 119 (465)
T ss_pred HHHHHHHhcCCcchhH
Confidence 3455577766544433
No 320
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=51.64 E-value=33 Score=24.87 Aligned_cols=47 Identities=19% Similarity=0.017 Sum_probs=37.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHH
Q 012626 267 DASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVI 313 (459)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 313 (459)
...+-.+..++...++.+++.++..|+..+.+.=.++..++.++..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 56788899999999999999999999988776666666555555443
No 321
>COG4769 Predicted membrane protein [Function unknown]
Probab=51.29 E-value=21 Score=28.11 Aligned_cols=50 Identities=20% Similarity=0.208 Sum_probs=33.8
Q ss_pred HHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 012626 40 YLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGV 95 (459)
Q Consensus 40 ~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (459)
.+..++.+...-++..++|+|.+-.+|.- ...++.+|..++++.+++.|-
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 34445556666677788888876555443 234577888899988888764
No 322
>PRK02237 hypothetical protein; Provisional
Probab=48.52 E-value=57 Score=23.77 Aligned_cols=48 Identities=17% Similarity=0.097 Sum_probs=37.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHH
Q 012626 267 DASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 314 (459)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 314 (459)
...|-.+..++...++.+++.++..|+..+-+.=.++..++.++..++
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 447888999999999999999999999877666666665555554433
No 323
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=48.50 E-value=66 Score=26.35 Aligned_cols=23 Identities=9% Similarity=0.273 Sum_probs=19.1
Q ss_pred HhHHHHHHHhhhhhhhhhhhccc
Q 012626 37 SSLYLAGLVASFVASPVTRDYGR 59 (459)
Q Consensus 37 s~~~l~~~i~~~~~g~l~dr~Gr 59 (459)
.-|.+++.++..+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 35678888999999999999875
No 324
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=47.60 E-value=26 Score=25.36 Aligned_cols=50 Identities=14% Similarity=-0.009 Sum_probs=40.2
Q ss_pred hhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 012626 30 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA 79 (459)
Q Consensus 30 ~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 79 (459)
+..|-..++|.-.+.+.++++++..|+.-+.+-=.+|..+..++..+..+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 55688888998889999999999999998877777777777777665443
No 325
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.72 E-value=2.3e+02 Score=25.86 Aligned_cols=37 Identities=16% Similarity=0.186 Sum_probs=16.7
Q ss_pred hcchHHHHHhHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 012626 245 LTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLA 281 (459)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 281 (459)
..+.+....-.|.+.++..-....-.+......++.+
T Consensus 24 wa~vn~~wv~lp~lv~elpe~wslpsyl~vvVqla~l 60 (439)
T KOG4255|consen 24 WAGVNGLWVELPLLVKELPEGWSLPSYLSVVVQLANL 60 (439)
T ss_pred HhhhcceeeehhHHHhhcCcccccchHHHHHHHHHcc
Confidence 3333444444666666643322333444444444443
No 326
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=46.61 E-value=84 Score=24.81 Aligned_cols=29 Identities=7% Similarity=-0.068 Sum_probs=21.4
Q ss_pred cccccccCChhhhhhhhHHHHHHHHHHHH
Q 012626 356 WTVPSEIFPLETRSAGQSITVAVNLFFTF 384 (459)
Q Consensus 356 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 384 (459)
|-+++....++..|+..|+-.+-.+++..
T Consensus 116 YGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 116 YGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred hhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 45556666778889999998887777654
No 327
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=45.63 E-value=3.6e+02 Score=27.84 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 012626 272 SSAMTGAVLASSTLISIATVDKL 294 (459)
Q Consensus 272 ~~~~~~~~~~~~~~~~g~l~d~~ 294 (459)
......+.+++..++.-.+.||.
T Consensus 162 ~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 162 ASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455556666666677777775
No 328
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=45.08 E-value=76 Score=24.95 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=25.4
Q ss_pred HhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 012626 37 SSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAAL 76 (459)
Q Consensus 37 s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~ 76 (459)
.-|.+++.+...+.|++.+|..+++..........++...
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~i 99 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLI 99 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 3566788888899999999988764333333333333333
No 329
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=44.05 E-value=2.7e+02 Score=25.82 Aligned_cols=85 Identities=18% Similarity=0.042 Sum_probs=58.3
Q ss_pred ccCchhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHH----HHHH-HHH----HhHHHHHHHHHHHhhc
Q 012626 26 KYDNQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLG----AALN-AAA----ANLAMLLTGRILLGVG 96 (459)
Q Consensus 26 ~~s~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~----~~~~-~~~----~~~~~l~~~r~l~G~~ 96 (459)
|-.--|.+.+.+.|.....+|+...-++.|.--.-+.+..-.++..++ .++. .|+ ++-+.+++.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 445567889999999999999999888877644333332222222221 1111 333 4667888899999999
Q ss_pred ccccchhhhHHHHh
Q 012626 97 IGFGNQAVPLYLSE 110 (459)
Q Consensus 97 ~~~~~~~~~~~i~~ 110 (459)
.|...|..+.++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999999888876
No 330
>PRK02237 hypothetical protein; Provisional
Probab=42.08 E-value=49 Score=24.09 Aligned_cols=50 Identities=12% Similarity=-0.056 Sum_probs=39.5
Q ss_pred hhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 012626 30 QGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAA 79 (459)
Q Consensus 30 ~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~ 79 (459)
+..|-..++|.-.+.+.++++++..|+.-+-+-=.+|..+..++..+..+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 44788888998899999999999999988777667777777776655433
No 331
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=37.14 E-value=2.5e+02 Score=23.53 Aligned_cols=110 Identities=8% Similarity=-0.095 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHH------HHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Q 012626 62 SIICGGISFLLGAALNAAAANLAM------LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTA 135 (459)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 135 (459)
.+-.++++.++.+++.++..-+.- -+..-++.++..|..+.....++....++++|....-.+........+.-
T Consensus 82 ~ld~~L~~~~if~~~~gi~~~f~~~~~~~~gi~tli~~~i~~G~~~~~~~~~i~~~~~~~~r~~~~k~~~~~~~~~~~w~ 161 (206)
T PF06570_consen 82 ALDNSLLFFGIFSLLFGIMGFFSPKNSNQYGIITLILVSIVGGLVFYFIFKYIYPYKKKKKRPSWWKYILISVLAMVLWI 161 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHH
Q ss_pred HHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhcc
Q 012626 136 NMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILL 171 (459)
Q Consensus 136 ~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~ 171 (459)
.............+-+...++..++++++..+.+++
T Consensus 162 ~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 162 VIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYL 197 (206)
T ss_pred HHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHH
No 332
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=33.10 E-value=73 Score=27.05 Aligned_cols=51 Identities=18% Similarity=0.107 Sum_probs=36.4
Q ss_pred HHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHH
Q 012626 87 LTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMI 138 (459)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 138 (459)
...-+-.|+|.|....++..-+.+.+| +......++-....-+..+.|...
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567899999999999999999996 455666666666655555555443
No 333
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=32.24 E-value=1.7e+02 Score=20.51 Aligned_cols=42 Identities=14% Similarity=-0.019 Sum_probs=29.2
Q ss_pred HHHHhhhhhhhhhhhccc-------hhHHHHHHHHHHHHHHHHHHHHhH
Q 012626 42 AGLVASFVASPVTRDYGR-------RASIICGGISFLLGAALNAAAANL 83 (459)
Q Consensus 42 ~~~i~~~~~g~l~dr~Gr-------r~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
+...+.+.++++.+|.-+ ++.+..+.++...+..+++..+|.
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 334455666666666544 788888888888888888776664
No 334
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=31.33 E-value=3.6e+02 Score=27.86 Aligned_cols=51 Identities=18% Similarity=0.069 Sum_probs=33.1
Q ss_pred hhhhhhhhh----ccchhHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHhhccc
Q 012626 48 FVASPVTRD----YGRRASIICGGISFLLGAALNAAAANL-AMLLTGRILLGVGIG 98 (459)
Q Consensus 48 ~~~g~l~dr----~Grr~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~r~l~G~~~~ 98 (459)
.+.+-++|. -||.+-++++.+++.++++...+...+ +.+...-++.+++.+
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 444556664 366788888999998888888776544 455555555555433
No 335
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=31.04 E-value=1.7e+02 Score=19.85 Aligned_cols=20 Identities=10% Similarity=-0.104 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHhhcccccch
Q 012626 83 LAMLLTGRILLGVGIGFGNQ 102 (459)
Q Consensus 83 ~~~l~~~r~l~G~~~~~~~~ 102 (459)
+..+.++-++.-+-....+|
T Consensus 38 ~~~~~~g~~~~~lv~vP~Wp 57 (76)
T PF06645_consen 38 FYIYGAGVVLTLLVVVPPWP 57 (76)
T ss_pred HHHHHHHHHHHHhheeCCcH
Confidence 33333333333333333333
No 336
>COG1422 Predicted membrane protein [Function unknown]
Probab=30.86 E-value=3.1e+02 Score=22.76 Aligned_cols=12 Identities=8% Similarity=0.296 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHH
Q 012626 127 ATTLGIFTANMI 138 (459)
Q Consensus 127 ~~~~G~~~g~~~ 138 (459)
+..+..+++|.+
T Consensus 30 ~~~ln~~f~P~i 41 (201)
T COG1422 30 GGALNVVFGPLL 41 (201)
T ss_pred HHHHHHHHhhhc
Confidence 334555666666
No 337
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=30.52 E-value=1e+02 Score=26.94 Aligned_cols=50 Identities=20% Similarity=0.263 Sum_probs=37.3
Q ss_pred HHHHhHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---------HHHHhhCCchh
Q 012626 250 SILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISI---------ATVDKLGRRAL 299 (459)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g---------~l~d~~~~~~~ 299 (459)
...+|.-.++++.|.++.....++....+...+..++.| +-.||+|||+.
T Consensus 35 cWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 35 CWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred HHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 344555667778899998888888888888888887765 34679998843
No 338
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=29.81 E-value=1.5e+02 Score=22.87 Aligned_cols=25 Identities=12% Similarity=0.202 Sum_probs=19.0
Q ss_pred HHHhccCCCcchHHHHHHHHHHHHH
Q 012626 107 YLSEMAPTHLRGGLNMMFQLATTLG 131 (459)
Q Consensus 107 ~i~~~~~~~~r~~~~~~~~~~~~~G 131 (459)
-+.|++|++.|....+.+.......
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHH
Confidence 3579999999998888777555443
No 339
>PRK10263 DNA translocase FtsK; Provisional
Probab=29.62 E-value=4.6e+02 Score=29.22 Aligned_cols=20 Identities=5% Similarity=-0.119 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHhhC
Q 012626 276 TGAVLASSTLISIATVDKLG 295 (459)
Q Consensus 276 ~~~~~~~~~~~~g~l~d~~~ 295 (459)
...++.+|..+...+..-+|
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 44555566666655555555
No 340
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.79 E-value=2.5e+02 Score=20.35 Aligned_cols=31 Identities=6% Similarity=-0.175 Sum_probs=17.5
Q ss_pred HHHhhhhhhhhhhh-ccchhHHHHHHHHHHHH
Q 012626 43 GLVASFVASPVTRD-YGRRASIICGGISFLLG 73 (459)
Q Consensus 43 ~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~~~ 73 (459)
..+.+.+.|.+.|+ +|-++.+.+..++.+++
T Consensus 55 pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 55 PTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 34455566777775 67666555554444443
No 341
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=26.76 E-value=1.7e+02 Score=18.51 Aligned_cols=46 Identities=11% Similarity=0.089 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHHHHHHHHhccCCCh
Q 012626 128 TTLGIFTANMINYGTQKLETWGWRLSLGLAAAPALMMTVGGILLPETP 175 (459)
Q Consensus 128 ~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~e~p 175 (459)
.-+|.++|-..+ ......++++....+..+.+++...+...+|+++
T Consensus 11 ~il~~vvgyI~s--sL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 11 FILGEVVGYIGS--SLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHH--HHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 344555554442 2222245677777777777777766666666543
No 342
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=26.75 E-value=1.8e+02 Score=22.56 Aligned_cols=24 Identities=21% Similarity=0.402 Sum_probs=18.5
Q ss_pred HHHhccCCCcchHHHHHHHHHHHH
Q 012626 107 YLSEMAPTHLRGGLNMMFQLATTL 130 (459)
Q Consensus 107 ~i~~~~~~~~r~~~~~~~~~~~~~ 130 (459)
-+.|++|+..|..+.+.+......
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHH
Confidence 467999999999888777765444
No 343
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=26.56 E-value=1.5e+02 Score=20.03 Aligned_cols=60 Identities=15% Similarity=-0.003 Sum_probs=34.7
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccchhhhHHHHhccCCCc
Q 012626 53 VTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRILLGVGIGFGNQAVPLYLSEMAPTHL 116 (459)
Q Consensus 53 l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 116 (459)
--|+-.|++-+.+.+.+-..+.++..+....+++-+.-+. .+...|-.-.++++--++++
T Consensus 10 ~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~~~la~~~~~----~av~LPwvAVviAN~~~~~~ 69 (73)
T PF11298_consen 10 SQDQRRRRRRYLIMMGIRIPCFVLAAVVYRLGWLAWAIIV----GAVPLPWVAVVIANARPPRR 69 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH----HhcccchhheeeccCCCCCC
Confidence 3466678888888888888888877777655322222111 23344544455555444433
No 344
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=26.02 E-value=6e+02 Score=24.45 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=24.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhCCchhh
Q 012626 265 KGDASLYSSAMTGAVLASSTLISIATVDKLGRRALL 300 (459)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 300 (459)
+.........+.++...+..+++-+...++.|--..
T Consensus 126 ~~~~~~~~ili~g~l~~l~~ifG~r~l~~l~~~a~~ 161 (442)
T COG1457 126 TGLPVWAGILIIGVLMTLVTIFGYRALHKLERIAVP 161 (442)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 333455666677777777788888888887765443
No 345
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=25.31 E-value=7.8e+02 Score=25.53 Aligned_cols=51 Identities=16% Similarity=0.164 Sum_probs=32.5
Q ss_pred hhhhhhhhhh----ccchhHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHhhcc
Q 012626 47 SFVASPVTRD----YGRRASIICGGISFLLGAALNAAAANL-AMLLTGRILLGVGI 97 (459)
Q Consensus 47 ~~~~g~l~dr----~Grr~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~r~l~G~~~ 97 (459)
+.+.+-++|. -||.+-++++.+++.++++...+...+ +.+..+-++.+++.
T Consensus 40 G~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 40 GIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 3444566664 366677788888888888877766444 45555555555543
No 346
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=25.23 E-value=2.7e+02 Score=20.19 Aligned_cols=13 Identities=8% Similarity=-0.194 Sum_probs=5.8
Q ss_pred HHHHHHh-hCCchh
Q 012626 287 SIATVDK-LGRRAL 299 (459)
Q Consensus 287 ~g~l~d~-~~~~~~ 299 (459)
.|+..|+ ++....
T Consensus 62 lG~WLD~~~~t~~~ 75 (100)
T TIGR02230 62 VGIWLDRHYPSPFS 75 (100)
T ss_pred HHHHHHhhcCCCcH
Confidence 3444454 454443
No 347
>PTZ00370 STEVOR; Provisional
Probab=25.17 E-value=61 Score=28.40 Aligned_cols=32 Identities=16% Similarity=0.371 Sum_probs=20.3
Q ss_pred ccchhHHHHHHHHHHHHHhheeeccCCCCCCH
Q 012626 397 FKFGIFLFFAGWVTIMTIFVYFFLPETKGVPI 428 (459)
Q Consensus 397 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 428 (459)
.+++...++..++.++.++++.++.++++++.
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrRK~sw 286 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRRKNSW 286 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 34666666666666666677777766665554
No 348
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=24.81 E-value=3.7e+02 Score=21.67 Aligned_cols=24 Identities=0% Similarity=-0.317 Sum_probs=19.0
Q ss_pred hhHHHHHhhhHHHHHHHHHHhccC
Q 012626 149 GWRLSLGLAAAPALMMTVGGILLP 172 (459)
Q Consensus 149 gwr~~f~~~~~~~~~~~~~~~~~~ 172 (459)
.+...+++.++.+.+..++.-.++
T Consensus 56 ~~~f~~~ipgI~stlgm~mvN~V~ 79 (166)
T PF05255_consen 56 HVTFVDWIPGIFSTLGMFMVNSVS 79 (166)
T ss_pred cccceeeehHHHHHHHHHHhcccc
Confidence 577888999999888887776554
No 349
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=24.51 E-value=5.9e+02 Score=23.84 Aligned_cols=16 Identities=6% Similarity=0.044 Sum_probs=9.8
Q ss_pred cchhhhHHHHhccCCC
Q 012626 100 GNQAVPLYLSEMAPTH 115 (459)
Q Consensus 100 ~~~~~~~~i~~~~~~~ 115 (459)
.+|+.+.-+.|+-.-+
T Consensus 41 GfPC~y~~vVDY~~~N 56 (374)
T PF01528_consen 41 GFPCFYAAVVDYSALN 56 (374)
T ss_pred CCCeeccccccchhcC
Confidence 4566666677765444
No 350
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=24.47 E-value=2.9e+02 Score=20.23 Aligned_cols=10 Identities=30% Similarity=0.518 Sum_probs=5.3
Q ss_pred HhhCCchhhh
Q 012626 292 DKLGRRALLI 301 (459)
Q Consensus 292 d~~~~~~~~~ 301 (459)
+|..+|+...
T Consensus 84 er~~~~~~~a 93 (113)
T PF13536_consen 84 ERLSPRRWLA 93 (113)
T ss_pred CCCCHHHHHH
Confidence 4555565543
No 351
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=23.20 E-value=4.5e+02 Score=22.02 Aligned_cols=38 Identities=11% Similarity=0.049 Sum_probs=16.7
Q ss_pred ccCChhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012626 361 EIFPLETRSAGQSITVAVNLFFTFVIAQIFLTLLCSFK 398 (459)
Q Consensus 361 ~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~ 398 (459)
+-.++++|-+..--......+...+....+..+.+.+|
T Consensus 29 ~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fg 66 (203)
T PF01914_consen 29 KGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFG 66 (203)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44444544443333333333333344444445555555
No 352
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=22.96 E-value=3.2e+02 Score=21.55 Aligned_cols=49 Identities=18% Similarity=0.230 Sum_probs=26.3
Q ss_pred hHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 012626 38 SLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAAANLAMLLTGRIL 92 (459)
Q Consensus 38 ~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 92 (459)
.+.++..+.+...-.+..|..||+.=.++.. +..+.++|..++.+..++
T Consensus 69 ~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giS------i~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 69 LFSLAGGLLSLLVMALLKKLFKKKFSLIGIS------IAGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 3444555555556666666665554444332 223455666666666554
No 353
>PF05814 DUF843: Baculovirus protein of unknown function (DUF843); InterPro: IPR008561 This family consists of several unidentified baculovirus proteins of around 85 residues long with no known function.
Probab=21.79 E-value=1.7e+02 Score=20.23 Aligned_cols=14 Identities=7% Similarity=0.050 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHhhc
Q 012626 384 FVIAQIFLTLLCSF 397 (459)
Q Consensus 384 ~~~~~~~~~~~~~~ 397 (459)
.++-.+.|.+.+..
T Consensus 7 ~~~Li~~~fi~~k~ 20 (83)
T PF05814_consen 7 FLALIVLGFIFDKN 20 (83)
T ss_pred HHHHHHHHHHHccc
Confidence 34455667777765
No 354
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=21.76 E-value=2.8e+02 Score=19.16 Aligned_cols=22 Identities=23% Similarity=0.165 Sum_probs=15.4
Q ss_pred cchhHHHHHhhhHHHHHHHHHH
Q 012626 147 TWGWRLSLGLAAAPALMMTVGG 168 (459)
Q Consensus 147 ~~gwr~~f~~~~~~~~~~~~~~ 168 (459)
-.||...|++.+--+++..++.
T Consensus 41 ~~GfPlgfw~aaQGsi~~fviL 62 (81)
T PF13937_consen 41 FGGFPLGFWFAAQGSIIVFVIL 62 (81)
T ss_pred eCCCChHHHHHHHhHHHHHHHH
Confidence 4689999999776666555443
No 355
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=21.52 E-value=70 Score=28.01 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=18.9
Q ss_pred ccchhHHHHHHHHHHHHHhheeeccCCCCCC
Q 012626 397 FKFGIFLFFAGWVTIMTIFVYFFLPETKGVP 427 (459)
Q Consensus 397 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 427 (459)
.+++...++..++.++.++++.++.++|+++
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWlyrrRK~s 289 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWLYRRRKKS 289 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3456666666666666666666666655544
No 356
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=21.09 E-value=7.4e+02 Score=23.76 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHhhCCchhhhhhhHHHHHHHHHH
Q 012626 278 AVLASSTLISIATVDKLGRRALLISGGIQMITCQVIV 314 (459)
Q Consensus 278 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 314 (459)
+..+.-.+++-.+.+.++++++..+=.++.+++++++
T Consensus 302 iLFI~LTF~~fflfE~~~~~~iHpiQY~LVGlAl~lF 338 (430)
T PF06123_consen 302 ILFIGLTFLAFFLFELLSKLRIHPIQYLLVGLALVLF 338 (430)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence 3333344455556676666666554444444444433
No 357
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=21.03 E-value=7.6e+02 Score=23.82 Aligned_cols=43 Identities=14% Similarity=-0.054 Sum_probs=28.1
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHhhhHHHH
Q 012626 113 PTHLRGGLNMMFQLATTLGIFTANMINYGTQKLETWGWRLSLGLAAAPAL 162 (459)
Q Consensus 113 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~~~~~~~~gwr~~f~~~~~~~~ 162 (459)
.+.+.+...++.+++.+.|.+.-|.... . +|-++..+..+++-
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g--~-----~Gf~p~lillll~~ 60 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAG--F-----GGLIPILLMLVLAY 60 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHh--c-----chHHHHHHHHHHHH
Confidence 4556778888898888888888877732 2 35555555444433
No 358
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=20.48 E-value=6.2e+02 Score=22.60 Aligned_cols=53 Identities=15% Similarity=0.058 Sum_probs=32.3
Q ss_pred HHHHHHHHhhcccccchhhhHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHh
Q 012626 86 LLTGRILLGVGIGFGNQAVPLYLSEMAPTHLRGGLNMMFQLATTLGIFTANMIN 139 (459)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 139 (459)
.-..|.+.|+-.- .+...++++.-.+|++++--..--...+.++..++-++++
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g 74 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIG 74 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 5667888888653 4567899999999865443222222334444445555553
No 359
>PRK03818 putative transporter; Validated
Probab=20.06 E-value=8.8e+02 Score=24.23 Aligned_cols=85 Identities=6% Similarity=-0.110 Sum_probs=47.4
Q ss_pred chhHHHHHHhHHHHHHHhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHhhcccccchhhhHH
Q 012626 29 NQGLAAFTSSLYLAGLVASFVASPVTRDYGRRASIICGGISFLLGAALNAAA-ANLAMLLTGRILLGVGIGFGNQAVPLY 107 (459)
Q Consensus 29 ~~~~~~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~ 107 (459)
-.+.|+....+.+|...|.-+..-+.+..|.+.. ..+.++..+..++..+. .-..-+=..+.+-.++.+...++..++
T Consensus 434 l~~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~ 512 (552)
T PRK03818 434 LRELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWI-GYGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAF 512 (552)
T ss_pred HHHHhHHHHHHHHHhhhhHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHH
Confidence 3456777777777777777666655555565543 45555554444443333 222222233444445556667788888
Q ss_pred HHhc-cCC
Q 012626 108 LSEM-APT 114 (459)
Q Consensus 108 i~~~-~~~ 114 (459)
+.|. .+.
T Consensus 513 a~~~~~~~ 520 (552)
T PRK03818 513 ANNLHPTS 520 (552)
T ss_pred HhcccCCC
Confidence 8885 443
Done!