Query 012628
Match_columns 459
No_of_seqs 310 out of 2278
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:38:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012628.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012628hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 2.4E-67 5.1E-72 485.9 38.0 395 59-455 2-396 (396)
2 KOG1411 Aspartate aminotransfe 100.0 1.4E-64 3.1E-69 456.9 30.0 402 56-458 25-426 (427)
3 PLN02397 aspartate transaminas 100.0 4.9E-61 1.1E-65 481.3 46.4 422 36-458 1-422 (423)
4 KOG1412 Aspartate aminotransfe 100.0 2.8E-59 6.1E-64 416.9 34.8 402 56-458 3-406 (410)
5 PTZ00376 aspartate aminotransf 100.0 1.3E-58 2.8E-63 462.6 43.4 398 59-457 5-403 (404)
6 PRK09257 aromatic amino acid a 100.0 7.6E-58 1.6E-62 456.4 43.8 393 59-455 2-396 (396)
7 COG0436 Aspartate/tyrosine/aro 100.0 4.1E-57 8.9E-62 445.0 37.4 346 83-458 28-392 (393)
8 PLN00175 aminotransferase fami 100.0 1.4E-50 3E-55 404.9 37.2 358 61-457 35-413 (413)
9 KOG0257 Kynurenine aminotransf 100.0 7E-51 1.5E-55 380.2 26.1 365 58-452 8-414 (420)
10 PRK07366 succinyldiaminopimela 100.0 1.6E-49 3.5E-54 395.7 35.1 342 82-455 29-388 (388)
11 PTZ00377 alanine aminotransfer 100.0 3E-49 6.6E-54 402.8 37.2 361 82-457 45-475 (481)
12 PRK13355 bifunctional HTH-doma 100.0 5.9E-49 1.3E-53 403.9 39.3 375 59-458 120-515 (517)
13 PRK07681 aspartate aminotransf 100.0 2.5E-49 5.5E-54 395.4 35.4 338 82-453 31-384 (399)
14 PLN02187 rooty/superroot1 100.0 7.5E-49 1.6E-53 396.3 38.3 366 69-457 48-438 (462)
15 PRK06855 aminotransferase; Val 100.0 1E-48 2.2E-53 393.7 38.1 356 82-457 31-429 (433)
16 PRK06207 aspartate aminotransf 100.0 1.2E-48 2.6E-53 390.4 36.6 345 83-458 39-403 (405)
17 PLN00145 tyrosine/nicotianamin 100.0 2.5E-48 5.5E-53 390.0 39.1 352 82-457 51-424 (430)
18 PLN00143 tyrosine/nicotianamin 100.0 1.4E-48 3E-53 390.5 37.0 363 70-457 19-404 (409)
19 PRK08068 transaminase; Reviewe 100.0 9E-49 1.9E-53 390.3 35.1 340 82-454 31-386 (389)
20 PRK08636 aspartate aminotransf 100.0 1.4E-48 3E-53 390.4 36.1 347 82-458 32-401 (403)
21 PRK07682 hypothetical protein; 100.0 1.2E-48 2.7E-53 388.1 34.9 342 83-459 20-378 (378)
22 PRK06348 aspartate aminotransf 100.0 1.4E-48 3.1E-53 388.0 35.2 353 66-454 14-382 (384)
23 PLN02231 alanine transaminase 100.0 9.9E-48 2.2E-52 392.0 40.2 354 82-457 128-527 (534)
24 PLN02656 tyrosine transaminase 100.0 7E-48 1.5E-52 385.6 37.8 349 81-458 29-404 (409)
25 PRK09147 succinyldiaminopimela 100.0 5.5E-48 1.2E-52 385.5 37.0 357 65-456 8-395 (396)
26 PRK08960 hypothetical protein; 100.0 6.1E-48 1.3E-52 384.0 35.6 355 65-456 12-386 (387)
27 TIGR03540 DapC_direct LL-diami 100.0 6.7E-48 1.5E-52 383.5 35.5 340 81-453 27-382 (383)
28 PRK09276 LL-diaminopimelate am 100.0 5.4E-48 1.2E-52 384.4 34.8 339 82-453 30-384 (385)
29 PRK06290 aspartate aminotransf 100.0 9.1E-48 2E-52 383.6 35.8 342 82-458 43-406 (410)
30 TIGR01264 tyr_amTase_E tyrosin 100.0 1.3E-47 2.8E-52 383.5 36.9 366 68-458 14-400 (401)
31 PRK09148 aminotransferase; Val 100.0 1.2E-47 2.7E-52 383.4 36.2 344 82-458 29-391 (405)
32 PRK12414 putative aminotransfe 100.0 8.6E-48 1.9E-52 382.2 33.6 336 82-453 28-383 (384)
33 PRK06107 aspartate aminotransf 100.0 1.6E-47 3.5E-52 382.6 35.8 344 82-458 32-401 (402)
34 PLN02450 1-aminocyclopropane-1 100.0 3.3E-47 7.2E-52 385.0 38.0 347 84-458 39-431 (468)
35 PTZ00433 tyrosine aminotransfe 100.0 4.6E-47 1E-51 380.3 37.7 353 81-458 31-409 (412)
36 PRK05942 aspartate aminotransf 100.0 4E-47 8.6E-52 378.9 35.0 340 82-454 34-389 (394)
37 PRK07337 aminotransferase; Val 100.0 3.4E-47 7.5E-52 378.9 34.4 338 81-455 28-387 (388)
38 PRK06108 aspartate aminotransf 100.0 7.4E-47 1.6E-51 376.2 36.1 343 83-457 24-382 (382)
39 PRK07309 aromatic amino acid a 100.0 1.6E-46 3.5E-51 374.0 37.6 342 83-458 30-389 (391)
40 PRK05957 aspartate aminotransf 100.0 1E-46 2.3E-51 375.1 36.2 344 83-458 27-386 (389)
41 TIGR03538 DapC_gpp succinyldia 100.0 1.3E-46 2.8E-51 375.3 36.8 338 81-454 26-392 (393)
42 PRK07324 transaminase; Validat 100.0 3.6E-47 7.7E-52 376.0 32.4 334 82-458 25-371 (373)
43 PLN02607 1-aminocyclopropane-1 100.0 1.7E-46 3.6E-51 377.0 37.3 349 81-457 44-437 (447)
44 PLN02376 1-aminocyclopropane-1 100.0 1.6E-46 3.4E-51 381.2 37.4 350 84-457 47-438 (496)
45 PRK07683 aminotransferase A; V 100.0 1.1E-46 2.4E-51 374.7 35.5 353 67-457 14-383 (387)
46 PRK08912 hypothetical protein; 100.0 9.1E-47 2E-51 375.8 34.9 340 83-457 26-386 (387)
47 PRK08361 aspartate aminotransf 100.0 2.1E-46 4.6E-51 373.5 33.9 343 83-458 33-391 (391)
48 PRK05764 aspartate aminotransf 100.0 4.5E-46 9.9E-51 371.8 36.1 367 58-458 4-392 (393)
49 PRK07590 L,L-diaminopimelate a 100.0 3E-46 6.6E-51 374.2 34.9 339 82-455 33-409 (409)
50 PRK09082 methionine aminotrans 100.0 1.7E-46 3.7E-51 373.4 32.5 336 83-453 30-385 (386)
51 PRK08637 hypothetical protein; 100.0 1.5E-45 3.2E-50 366.7 38.9 362 83-459 3-388 (388)
52 KOG0259 Tyrosine aminotransfer 100.0 1.9E-45 4.1E-50 337.6 35.4 367 68-457 42-433 (447)
53 TIGR01265 tyr_nico_aTase tyros 100.0 1.5E-45 3.3E-50 368.4 37.8 366 70-458 16-402 (403)
54 COG1167 ARO8 Transcriptional r 100.0 5E-46 1.1E-50 374.4 34.4 348 82-458 88-456 (459)
55 PRK07777 aminotransferase; Val 100.0 1.1E-45 2.5E-50 367.9 36.0 355 65-456 9-385 (387)
56 PRK05839 hypothetical protein; 100.0 9.4E-46 2E-50 366.1 34.2 342 71-456 12-373 (374)
57 PRK08175 aminotransferase; Val 100.0 2.5E-45 5.4E-50 366.1 36.6 343 82-457 28-389 (395)
58 PRK08363 alanine aminotransfer 100.0 2.8E-45 6E-50 366.3 36.5 349 82-457 29-394 (398)
59 PRK09265 aminotransferase AlaT 100.0 5.4E-45 1.2E-49 364.8 38.0 352 81-457 31-401 (404)
60 PRK07550 hypothetical protein; 100.0 4.4E-45 9.5E-50 363.5 36.2 356 67-454 11-384 (386)
61 PLN02368 alanine transaminase 100.0 3E-45 6.6E-50 363.2 32.7 323 82-419 37-404 (407)
62 PRK15481 transcriptional regul 100.0 2.1E-45 4.4E-50 370.7 31.5 330 83-456 85-430 (431)
63 PRK09275 aspartate aminotransf 100.0 1.6E-45 3.5E-50 370.5 30.3 339 84-457 101-517 (527)
64 PRK07568 aspartate aminotransf 100.0 1.7E-44 3.7E-49 361.0 36.1 341 83-458 30-393 (397)
65 TIGR03537 DapC succinyldiamino 100.0 1.7E-44 3.6E-49 354.5 35.1 329 85-453 2-349 (350)
66 TIGR03542 DAPAT_plant LL-diami 100.0 3.3E-44 7.2E-49 358.7 35.9 337 81-454 31-401 (402)
67 PRK07865 N-succinyldiaminopime 100.0 9E-44 2E-48 351.3 33.0 346 58-452 3-363 (364)
68 PF00155 Aminotran_1_2: Aminot 100.0 1.8E-44 3.9E-49 356.7 27.5 345 84-451 2-363 (363)
69 PRK02610 histidinol-phosphate 100.0 2.9E-43 6.2E-48 348.6 35.9 333 83-458 28-372 (374)
70 COG1168 MalY Bifunctional PLP- 100.0 7.6E-43 1.7E-47 323.2 35.1 347 81-458 23-387 (388)
71 PRK01533 histidinol-phosphate 100.0 1.4E-43 3.1E-48 348.7 30.8 323 82-457 28-355 (366)
72 PRK06836 aspartate aminotransf 100.0 9.2E-43 2E-47 347.4 36.2 338 82-458 32-392 (394)
73 TIGR03801 asp_4_decarbox aspar 100.0 2E-43 4.3E-48 355.0 30.6 339 84-457 95-516 (521)
74 TIGR03539 DapC_actino succinyl 100.0 1.4E-42 3.1E-47 341.6 31.9 332 70-451 9-356 (357)
75 PRK03317 histidinol-phosphate 100.0 3.9E-42 8.4E-47 340.2 33.8 328 84-456 27-363 (368)
76 PRK14809 histidinol-phosphate 100.0 8.9E-42 1.9E-46 336.2 34.7 318 82-456 29-356 (357)
77 PRK06358 threonine-phosphate d 100.0 1.3E-41 2.8E-46 334.1 33.6 323 83-455 19-353 (354)
78 PRK09440 avtA valine--pyruvate 100.0 1.6E-41 3.4E-46 341.4 34.3 343 82-457 29-411 (416)
79 PLN02672 methionine S-methyltr 100.0 1.4E-41 3.1E-46 361.1 35.4 343 82-456 696-1079(1082)
80 PRK09105 putative aminotransfe 100.0 2.2E-41 4.7E-46 333.9 32.9 317 83-456 43-369 (370)
81 COG0079 HisC Histidinol-phosph 100.0 3.1E-41 6.7E-46 326.6 32.9 321 83-458 22-355 (356)
82 PRK08056 threonine-phosphate d 100.0 5.6E-41 1.2E-45 330.2 34.4 335 69-456 7-354 (356)
83 PRK03158 histidinol-phosphate 100.0 3.9E-41 8.5E-46 332.1 32.4 319 83-454 29-358 (359)
84 PLN03026 histidinol-phosphate 100.0 5.3E-41 1.2E-45 332.5 33.0 316 82-454 51-379 (380)
85 PRK04870 histidinol-phosphate 100.0 5E-41 1.1E-45 330.9 32.0 320 83-455 26-356 (356)
86 PRK05166 histidinol-phosphate 100.0 6E-41 1.3E-45 331.8 32.7 324 82-456 35-370 (371)
87 PRK05387 histidinol-phosphate 100.0 6.7E-41 1.4E-45 329.8 31.9 316 83-456 24-352 (353)
88 PRK08153 histidinol-phosphate 100.0 8.5E-41 1.8E-45 330.2 32.3 323 81-458 30-366 (369)
89 KOG0256 1-aminocyclopropane-1- 100.0 1.2E-40 2.6E-45 308.6 30.3 316 120-457 115-461 (471)
90 PRK06225 aspartate aminotransf 100.0 4.2E-40 9.1E-45 327.1 34.4 332 82-458 27-377 (380)
91 PRK07392 threonine-phosphate d 100.0 3E-40 6.4E-45 325.6 33.0 321 83-456 22-358 (360)
92 PRK14808 histidinol-phosphate 100.0 1.9E-39 4.2E-44 315.9 32.6 311 82-454 18-334 (335)
93 PRK14807 histidinol-phosphate 100.0 4E-39 8.6E-44 316.4 33.8 319 83-455 22-350 (351)
94 PRK03967 histidinol-phosphate 100.0 3E-39 6.4E-44 315.2 31.9 309 83-456 18-333 (337)
95 PRK07908 hypothetical protein; 100.0 5.5E-39 1.2E-43 315.4 33.4 316 81-456 20-346 (349)
96 PRK01688 histidinol-phosphate 100.0 1.5E-39 3.3E-44 319.1 28.0 311 84-452 29-351 (351)
97 PRK04781 histidinol-phosphate 100.0 7.1E-39 1.5E-43 315.7 31.0 296 120-455 54-361 (364)
98 PRK02731 histidinol-phosphate 100.0 1.6E-38 3.4E-43 314.6 33.6 322 82-456 31-365 (367)
99 PRK03321 putative aminotransfe 100.0 1.3E-38 2.8E-43 313.3 30.4 323 83-457 22-351 (352)
100 PRK06425 histidinol-phosphate 100.0 1.5E-38 3.3E-43 309.8 28.5 285 120-455 35-331 (332)
101 PRK06959 putative threonine-ph 100.0 5.4E-38 1.2E-42 306.1 31.9 304 83-458 24-334 (339)
102 PRK04635 histidinol-phosphate 100.0 1.9E-38 4.2E-43 311.9 28.3 312 83-454 31-352 (354)
103 KOG0634 Aromatic amino acid am 100.0 2.9E-38 6.3E-43 295.2 27.6 321 119-457 93-466 (472)
104 TIGR01141 hisC histidinol-phos 100.0 7.3E-38 1.6E-42 307.4 30.4 315 83-452 19-346 (346)
105 PRK05664 threonine-phosphate d 100.0 1.2E-37 2.5E-42 303.1 31.4 301 84-458 21-329 (330)
106 TIGR01140 L_thr_O3P_dcar L-thr 100.0 6.4E-37 1.4E-41 298.1 29.7 315 68-451 3-329 (330)
107 PRK00950 histidinol-phosphate 100.0 1.4E-36 3E-41 300.0 32.1 313 83-456 34-361 (361)
108 PRK08354 putative aminotransfe 100.0 2.1E-36 4.6E-41 291.9 32.0 292 83-454 8-309 (311)
109 PRK13238 tnaA tryptophanase/L- 100.0 7.9E-33 1.7E-37 277.9 32.7 342 81-457 34-433 (460)
110 cd00609 AAT_like Aspartate ami 100.0 2.8E-32 6.1E-37 267.8 33.4 332 86-452 1-349 (350)
111 COG3977 Alanine-alpha-ketoisov 100.0 1.4E-30 3.1E-35 232.3 28.2 354 70-457 16-411 (417)
112 KOG0258 Alanine aminotransfera 100.0 1E-29 2.3E-34 234.3 30.6 335 103-454 88-466 (475)
113 cd00617 Tnase_like Tryptophana 100.0 3.7E-29 8E-34 247.9 29.6 340 81-457 9-408 (431)
114 TIGR03392 FeS_syn_CsdA cystein 100.0 5.4E-29 1.2E-33 249.0 28.7 328 92-458 18-396 (398)
115 PRK10874 cysteine sulfinate de 100.0 4E-29 8.6E-34 250.2 27.0 327 92-458 21-399 (401)
116 COG1104 NifS Cysteine sulfinat 100.0 2E-29 4.3E-34 239.0 22.6 326 92-458 3-378 (386)
117 TIGR01822 2am3keto_CoA 2-amino 100.0 9.2E-28 2E-32 239.9 32.6 326 82-458 37-390 (393)
118 PRK10534 L-threonine aldolase; 100.0 2.5E-28 5.4E-33 238.4 27.4 316 86-456 2-332 (333)
119 TIGR03576 pyridox_MJ0158 pyrid 100.0 1.9E-27 4.1E-32 231.5 31.2 293 103-456 35-346 (346)
120 TIGR00858 bioF 8-amino-7-oxono 100.0 1.4E-27 3.1E-32 235.7 30.7 320 82-452 15-360 (360)
121 PRK06939 2-amino-3-ketobutyrat 100.0 2.1E-27 4.5E-32 237.7 32.3 330 82-458 41-394 (397)
122 PRK02948 cysteine desulfurase; 100.0 5.1E-28 1.1E-32 240.6 25.0 323 93-458 3-375 (381)
123 PRK09295 bifunctional cysteine 100.0 3.5E-27 7.6E-32 236.4 29.7 326 92-456 25-403 (406)
124 KOG0633 Histidinol phosphate a 100.0 3.9E-28 8.5E-33 212.6 18.9 277 145-455 82-375 (375)
125 TIGR01825 gly_Cac_T_rel pyrido 100.0 9.3E-27 2E-31 232.0 31.6 331 82-458 32-382 (385)
126 PLN02822 serine palmitoyltrans 100.0 3.4E-27 7.3E-32 239.3 28.4 329 82-458 108-478 (481)
127 PLN02721 threonine aldolase 100.0 1.2E-26 2.5E-31 228.6 30.7 324 84-457 6-352 (353)
128 PLN02483 serine palmitoyltrans 100.0 9.4E-27 2E-31 236.5 29.9 335 82-458 99-467 (489)
129 TIGR00707 argD acetylornithine 100.0 1.2E-26 2.6E-31 230.7 29.8 332 82-455 26-379 (379)
130 TIGR01979 sufS cysteine desulf 100.0 1.4E-26 2.9E-31 232.2 29.9 330 84-458 18-402 (403)
131 cd06502 TA_like Low-specificit 100.0 1.7E-26 3.8E-31 226.0 30.0 308 103-453 11-337 (338)
132 PRK02627 acetylornithine amino 100.0 1.2E-26 2.5E-31 232.2 29.4 333 82-458 38-395 (396)
133 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.6E-26 3.5E-31 228.5 29.7 289 128-458 53-369 (370)
134 PLN02855 Bifunctional selenocy 100.0 1.8E-26 3.8E-31 232.6 29.2 331 84-459 32-420 (424)
135 PRK13392 5-aminolevulinate syn 100.0 6.6E-26 1.4E-30 227.4 31.1 327 83-458 46-398 (410)
136 TIGR03403 nifS_epsilon cystein 100.0 1.1E-26 2.4E-31 231.1 25.2 329 93-458 2-376 (382)
137 PRK05958 8-amino-7-oxononanoat 100.0 7.5E-26 1.6E-30 225.5 30.9 325 82-455 38-385 (385)
138 COG0520 csdA Selenocysteine ly 100.0 1.7E-25 3.7E-30 220.3 31.7 326 92-456 24-404 (405)
139 cd06454 KBL_like KBL_like; thi 99.9 1.4E-25 3.1E-30 220.5 29.4 320 84-454 2-348 (349)
140 PF12897 Aminotran_MocR: Alani 99.9 2.9E-25 6.4E-30 206.8 28.3 314 120-456 62-414 (425)
141 cd00378 SHMT Serine-glycine hy 99.9 1E-25 2.2E-30 225.8 27.3 329 83-457 19-385 (402)
142 PRK01278 argD acetylornithine 99.9 2E-25 4.4E-30 222.4 29.1 337 82-458 30-389 (389)
143 cd06451 AGAT_like Alanine-glyo 99.9 4.7E-25 1E-29 217.4 31.2 314 99-456 7-356 (356)
144 TIGR01976 am_tr_V_VC1184 cyste 99.9 2.3E-25 4.9E-30 222.9 29.2 323 93-451 20-397 (397)
145 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.6E-25 1.4E-29 216.6 30.3 312 102-455 13-360 (361)
146 PRK03244 argD acetylornithine 99.9 4.3E-25 9.2E-30 220.8 29.0 328 82-458 42-395 (398)
147 TIGR03402 FeS_nifS cysteine de 99.9 2.2E-25 4.7E-30 221.6 26.3 321 93-458 2-373 (379)
148 cd00613 GDC-P Glycine cleavage 99.9 3.8E-25 8.3E-30 221.4 27.0 320 84-451 21-398 (398)
149 TIGR00713 hemL glutamate-1-sem 99.9 1.8E-24 3.8E-29 217.9 31.0 337 82-458 47-423 (423)
150 cd06453 SufS_like Cysteine des 99.9 8.9E-25 1.9E-29 216.8 28.4 318 93-451 2-373 (373)
151 PRK13479 2-aminoethylphosphona 99.9 1E-24 2.2E-29 215.9 28.3 316 101-458 15-364 (368)
152 cd00610 OAT_like Acetyl ornith 99.9 9.4E-25 2E-29 219.7 26.5 338 82-455 35-413 (413)
153 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 4.2E-24 9.1E-29 210.5 30.1 310 102-455 10-355 (355)
154 PLN02409 serine--glyoxylate am 99.9 3.9E-24 8.5E-29 213.4 30.1 323 98-458 16-373 (401)
155 PLN02242 methionine gamma-lyas 99.9 4.5E-24 9.8E-29 212.5 28.1 222 121-392 69-298 (418)
156 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 7E-24 1.5E-28 210.9 29.2 329 83-458 18-382 (387)
157 TIGR02326 transamin_PhnW 2-ami 99.9 9.3E-24 2E-28 208.7 29.7 316 98-456 10-361 (363)
158 PRK05093 argD bifunctional N-s 99.9 5.2E-24 1.1E-28 213.0 28.1 329 82-458 39-401 (403)
159 PRK09064 5-aminolevulinate syn 99.9 1.9E-23 4.2E-28 209.5 32.3 327 83-458 46-398 (407)
160 TIGR01821 5aminolev_synth 5-am 99.9 1.8E-23 4E-28 209.2 31.7 327 83-458 45-397 (402)
161 TIGR02006 IscS cysteine desulf 99.9 2.7E-24 5.8E-29 215.1 25.5 324 92-458 5-378 (402)
162 PRK02936 argD acetylornithine 99.9 1.9E-23 4E-28 207.5 30.4 334 82-455 28-377 (377)
163 PRK07179 hypothetical protein; 99.9 2.5E-23 5.3E-28 208.6 31.2 322 82-458 53-399 (407)
164 PRK07049 methionine gamma-lyas 99.9 3.3E-23 7.1E-28 207.1 31.0 224 120-391 78-311 (427)
165 PRK13520 L-tyrosine decarboxyl 99.9 3.1E-23 6.7E-28 205.7 29.0 322 102-457 32-371 (371)
166 PRK04073 rocD ornithine--oxo-a 99.9 7.5E-23 1.6E-27 204.2 30.1 326 82-455 39-395 (396)
167 PRK08088 4-aminobutyrate amino 99.9 6E-23 1.3E-27 206.4 28.9 344 82-458 40-424 (425)
168 cd06450 DOPA_deC_like DOPA dec 99.9 2.1E-23 4.5E-28 204.8 25.0 299 103-453 12-344 (345)
169 PRK13393 5-aminolevulinate syn 99.9 3.9E-22 8.5E-27 199.8 33.4 327 83-458 45-397 (406)
170 TIGR01437 selA_rel uncharacter 99.9 1.7E-22 3.6E-27 198.7 29.3 315 83-455 8-363 (363)
171 PRK14012 cysteine desulfurase; 99.9 3.9E-23 8.4E-28 207.0 24.8 324 92-458 5-380 (404)
172 TIGR01977 am_tr_V_EF2568 cyste 99.9 7.1E-23 1.5E-27 203.4 26.5 321 93-453 2-375 (376)
173 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.6E-22 5.7E-27 199.1 29.2 318 103-453 33-372 (373)
174 PRK04260 acetylornithine amino 99.9 5.5E-22 1.2E-26 196.7 31.3 328 82-455 28-375 (375)
175 PRK00451 glycine dehydrogenase 99.9 1.8E-22 3.8E-27 204.9 27.9 318 84-455 69-446 (447)
176 PRK12381 bifunctional succinyl 99.9 2.3E-22 5E-27 201.0 27.9 336 82-458 38-400 (406)
177 KOG1549 Cysteine desulfurase N 99.9 3.2E-23 6.9E-28 197.4 18.5 201 83-318 42-255 (428)
178 PRK06234 methionine gamma-lyas 99.9 1.5E-21 3.3E-26 194.1 31.3 216 124-391 62-284 (400)
179 PRK00011 glyA serine hydroxyme 99.9 7.1E-22 1.5E-26 198.8 28.8 324 83-457 25-389 (416)
180 PRK08247 cystathionine gamma-s 99.9 1.1E-21 2.3E-26 193.3 29.1 274 124-458 50-365 (366)
181 PLN03227 serine palmitoyltrans 99.9 1.4E-21 3.1E-26 193.9 29.5 329 86-458 1-383 (392)
182 TIGR03235 DNA_S_dndA cysteine 99.9 1.3E-22 2.8E-27 199.8 21.0 291 94-431 2-321 (353)
183 PLN02651 cysteine desulfurase 99.9 2.5E-22 5.4E-27 198.4 22.7 296 93-430 2-321 (364)
184 PRK00854 rocD ornithine--oxo-a 99.9 1.1E-20 2.5E-25 189.1 32.7 328 82-456 40-400 (401)
185 PRK08133 O-succinylhomoserine 99.9 8.2E-21 1.8E-25 188.3 28.9 236 103-391 36-277 (390)
186 PLN00144 acetylornithine trans 99.9 1.7E-20 3.7E-25 185.7 30.3 328 82-458 14-381 (382)
187 PRK06460 hypothetical protein; 99.9 8.7E-21 1.9E-25 187.2 27.6 214 124-391 43-261 (376)
188 PRK07582 cystathionine gamma-l 99.9 7.4E-21 1.6E-25 187.1 26.1 274 124-458 49-366 (366)
189 PTZ00125 ornithine aminotransf 99.9 3.1E-20 6.8E-25 185.9 31.1 338 82-458 30-396 (400)
190 PRK06767 methionine gamma-lyas 99.9 2.4E-20 5.1E-25 185.0 29.7 274 124-457 59-385 (386)
191 PRK08249 cystathionine gamma-s 99.9 1.2E-20 2.7E-25 187.1 27.5 216 124-392 62-281 (398)
192 TIGR03246 arg_catab_astC succi 99.9 1.5E-20 3.3E-25 187.4 28.3 329 82-458 34-396 (397)
193 PRK07504 O-succinylhomoserine 99.9 1.4E-20 3E-25 187.0 27.8 215 124-391 63-282 (398)
194 PF00266 Aminotran_5: Aminotra 99.9 1.7E-20 3.6E-25 186.0 27.7 315 93-447 2-371 (371)
195 TIGR02080 O_succ_thio_ly O-suc 99.9 4.5E-20 9.8E-25 182.2 28.4 222 120-392 46-269 (382)
196 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.2E-19 2.7E-24 182.0 31.4 338 82-456 32-419 (420)
197 PRK09792 4-aminobutyrate trans 99.9 1.2E-19 2.6E-24 181.8 30.9 336 82-456 39-420 (421)
198 TIGR01328 met_gam_lyase methio 99.9 7.8E-20 1.7E-24 181.2 29.1 217 124-391 57-277 (391)
199 PRK00062 glutamate-1-semialdeh 99.9 6.1E-20 1.3E-24 184.4 28.7 338 82-458 49-425 (426)
200 COG0075 Serine-pyruvate aminot 99.9 1.5E-19 3.2E-24 173.3 29.8 317 98-458 12-364 (383)
201 PRK08776 cystathionine gamma-s 99.9 8E-20 1.7E-24 181.5 29.1 215 125-392 59-278 (405)
202 PRK05937 8-amino-7-oxononanoat 99.9 7E-20 1.5E-24 181.2 28.6 327 83-458 4-351 (370)
203 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.8E-19 3.9E-24 178.5 31.3 192 102-331 12-205 (379)
204 PRK08045 cystathionine gamma-s 99.9 8.9E-20 1.9E-24 180.2 28.8 216 124-392 50-270 (386)
205 PLN02624 ornithine-delta-amino 99.9 1.6E-19 3.5E-24 183.2 30.6 333 82-457 74-444 (474)
206 PRK06918 4-aminobutyrate amino 99.9 2.3E-19 4.9E-24 181.5 31.0 339 82-458 53-444 (451)
207 PRK06777 4-aminobutyrate amino 99.9 2.3E-19 5E-24 179.8 30.3 340 82-456 39-420 (421)
208 PRK07811 cystathionine gamma-s 99.9 2E-19 4.4E-24 178.2 28.9 215 124-391 59-278 (388)
209 TIGR01325 O_suc_HS_sulf O-succ 99.9 2.8E-19 6.1E-24 176.9 29.3 216 124-392 52-271 (380)
210 cd00614 CGS_like CGS_like: Cys 99.9 1.5E-19 3.3E-24 178.4 27.3 216 124-392 38-258 (369)
211 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2.5E-19 5.4E-24 176.7 28.5 196 100-332 7-206 (376)
212 PRK07503 methionine gamma-lyas 99.9 1.9E-19 4.1E-24 179.2 27.9 216 124-391 63-283 (403)
213 TIGR01885 Orn_aminotrans ornit 99.9 6.6E-19 1.4E-23 176.2 31.7 331 82-456 36-401 (401)
214 PRK04366 glycine dehydrogenase 99.9 3E-19 6.4E-24 181.7 28.5 330 87-457 72-448 (481)
215 PRK07505 hypothetical protein; 99.9 9.2E-19 2E-23 175.2 31.2 323 82-457 45-399 (402)
216 PRK07050 cystathionine beta-ly 99.9 6.7E-19 1.4E-23 174.6 29.7 215 124-391 63-282 (394)
217 PRK07810 O-succinylhomoserine 99.9 4E-19 8.6E-24 176.6 27.3 214 124-391 68-287 (403)
218 PRK08360 4-aminobutyrate amino 99.8 1.5E-18 3.3E-23 174.4 30.9 341 82-458 40-427 (443)
219 PRK08861 cystathionine gamma-s 99.8 8.4E-19 1.8E-23 172.8 27.9 216 124-392 51-271 (388)
220 COG0156 BioF 7-keto-8-aminopel 99.8 2.3E-18 5E-23 166.7 30.1 323 82-454 38-387 (388)
221 PRK08574 cystathionine gamma-s 99.8 1.1E-18 2.5E-23 172.4 27.9 215 124-391 51-269 (385)
222 TIGR01814 kynureninase kynuren 99.8 1.1E-18 2.3E-23 175.0 28.1 328 83-455 26-405 (406)
223 PRK07269 cystathionine gamma-s 99.8 1.2E-18 2.6E-23 170.8 27.3 277 124-456 52-363 (364)
224 PRK04612 argD acetylornithine 99.8 2.1E-18 4.5E-23 171.8 29.2 339 82-458 39-404 (408)
225 PRK09028 cystathionine beta-ly 99.8 2.8E-18 6.2E-23 168.8 29.6 219 120-392 53-278 (394)
226 PRK08064 cystathionine beta-ly 99.8 1.6E-18 3.5E-23 171.9 27.9 212 127-392 55-271 (390)
227 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 1.6E-18 3.5E-23 173.5 27.6 159 124-318 55-217 (418)
228 PRK07495 4-aminobutyrate amino 99.8 2.8E-18 6.1E-23 171.7 28.3 337 82-459 39-423 (425)
229 PRK08248 O-acetylhomoserine am 99.8 2E-18 4.3E-23 172.7 27.0 158 125-318 63-224 (431)
230 PRK05939 hypothetical protein; 99.8 5.9E-18 1.3E-22 167.7 29.8 154 129-318 50-206 (397)
231 COG4992 ArgD Ornithine/acetylo 99.8 4.6E-18 1E-22 161.5 27.4 327 80-458 39-399 (404)
232 PRK05968 hypothetical protein; 99.8 3.5E-18 7.5E-23 169.5 27.7 212 126-391 63-279 (389)
233 TIGR03588 PseC UDP-4-keto-6-de 99.8 1.4E-17 3.1E-22 165.5 31.3 197 101-331 7-208 (380)
234 cd00615 Orn_deC_like Ornithine 99.8 3.4E-19 7.3E-24 170.6 18.3 172 122-317 55-231 (294)
235 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 6.2E-18 1.3E-22 167.5 27.7 193 102-331 9-204 (375)
236 cd00616 AHBA_syn 3-amino-5-hyd 99.8 7.9E-18 1.7E-22 165.7 27.9 293 108-452 3-352 (352)
237 PLN02955 8-amino-7-oxononanoat 99.8 1.1E-17 2.4E-22 165.7 28.8 319 83-457 102-461 (476)
238 PRK07671 cystathionine beta-ly 99.8 1E-17 2.2E-22 165.4 28.4 214 124-391 48-266 (377)
239 PRK02769 histidine decarboxyla 99.8 1.3E-17 2.7E-22 164.0 28.8 289 130-457 69-372 (380)
240 PLN02509 cystathionine beta-ly 99.8 1.4E-17 3.1E-22 166.8 29.2 221 120-391 125-349 (464)
241 PRK08117 4-aminobutyrate amino 99.8 8.7E-18 1.9E-22 169.4 27.9 340 82-458 42-430 (433)
242 TIGR01329 cysta_beta_ly_E cyst 99.8 5.9E-18 1.3E-22 167.2 25.2 163 128-329 49-216 (378)
243 COG2008 GLY1 Threonine aldolas 99.8 3.1E-17 6.8E-22 152.9 27.1 313 103-455 13-341 (342)
244 TIGR03531 selenium_SpcS O-phos 99.8 2.1E-17 4.7E-22 163.7 27.5 230 129-391 108-344 (444)
245 TIGR01788 Glu-decarb-GAD gluta 99.8 9.2E-18 2E-22 167.2 25.0 333 101-458 52-430 (431)
246 PRK05964 adenosylmethionine--8 99.8 5.3E-17 1.2E-21 163.2 30.2 344 82-458 41-423 (423)
247 TIGR02407 ectoine_ectB diamino 99.8 6E-17 1.3E-21 161.9 30.3 343 82-457 34-412 (412)
248 TIGR01324 cysta_beta_ly_B cyst 99.8 4.6E-17 1E-21 160.3 28.9 217 120-391 42-266 (377)
249 PRK06084 O-acetylhomoserine am 99.8 3.6E-17 7.8E-22 163.5 27.5 158 125-318 57-218 (425)
250 PRK15407 lipopolysaccharide bi 99.8 1.4E-16 3E-21 159.9 31.6 209 87-331 27-244 (438)
251 PRK06702 O-acetylhomoserine am 99.8 3.6E-17 7.7E-22 162.4 26.7 153 126-313 61-222 (432)
252 PTZ00094 serine hydroxymethylt 99.8 3.1E-17 6.7E-22 166.1 26.1 327 83-456 34-407 (452)
253 PRK09264 diaminobutyrate--2-ox 99.8 2.3E-16 5E-21 158.4 31.2 345 82-458 38-417 (425)
254 PRK06058 4-aminobutyrate amino 99.8 2E-16 4.4E-21 159.6 30.9 342 82-458 55-443 (443)
255 PRK06176 cystathionine gamma-s 99.8 7.4E-17 1.6E-21 159.2 27.0 165 127-329 51-219 (380)
256 PRK05967 cystathionine beta-ly 99.8 1.3E-16 2.8E-21 156.9 28.0 217 120-391 56-280 (395)
257 PLN03032 serine decarboxylase; 99.8 9.8E-17 2.1E-21 156.5 26.6 325 87-453 24-372 (374)
258 COG0399 WecE Predicted pyridox 99.8 6.2E-16 1.4E-20 148.7 29.9 196 102-334 13-210 (374)
259 PLN02724 Molybdenum cofactor s 99.8 5.9E-17 1.3E-21 174.3 25.5 335 92-455 36-486 (805)
260 COG0001 HemL Glutamate-1-semia 99.8 2.2E-16 4.8E-21 151.7 24.9 329 83-458 53-429 (432)
261 PRK13034 serine hydroxymethylt 99.8 9.5E-16 2.1E-20 153.4 30.4 324 83-457 28-392 (416)
262 PRK03715 argD acetylornithine 99.8 1.2E-15 2.6E-20 151.5 30.6 337 82-458 35-394 (395)
263 cd00611 PSAT_like Phosphoserin 99.8 1.7E-16 3.7E-21 155.9 23.8 310 98-455 6-354 (355)
264 COG0160 GabT 4-aminobutyrate a 99.8 6E-16 1.3E-20 151.5 27.0 340 82-458 55-446 (447)
265 PRK08593 4-aminobutyrate amino 99.8 1.6E-15 3.5E-20 152.8 30.9 340 82-458 41-430 (445)
266 TIGR00709 dat 2,4-diaminobutyr 99.8 1.8E-15 3.9E-20 152.6 30.4 339 82-457 38-435 (442)
267 PRK05994 O-acetylhomoserine am 99.7 1.2E-15 2.7E-20 152.8 28.7 156 127-318 64-223 (427)
268 TIGR02618 tyr_phenol_ly tyrosi 99.7 3.4E-15 7.3E-20 146.2 30.7 316 104-457 50-426 (450)
269 PLN02482 glutamate-1-semialdeh 99.7 2E-15 4.3E-20 152.3 29.8 331 82-458 98-474 (474)
270 PRK13580 serine hydroxymethylt 99.7 5.8E-16 1.2E-20 153.7 25.3 325 83-457 49-445 (493)
271 KOG1368 Threonine aldolase [Am 99.7 1.1E-15 2.4E-20 137.3 24.3 311 103-455 35-366 (384)
272 PRK03080 phosphoserine aminotr 99.7 3.6E-16 7.9E-21 154.8 23.5 305 102-458 23-374 (378)
273 PRK08134 O-acetylhomoserine am 99.7 1.2E-15 2.6E-20 152.6 27.0 157 126-318 64-224 (433)
274 cd01494 AAT_I Aspartate aminot 99.7 5.9E-17 1.3E-21 141.7 14.8 167 128-318 2-169 (170)
275 TIGR01364 serC_1 phosphoserine 99.7 2.2E-15 4.7E-20 147.1 26.9 305 103-457 4-348 (349)
276 PRK06541 hypothetical protein; 99.7 5E-15 1.1E-19 149.6 30.1 343 82-458 51-456 (460)
277 PRK00615 glutamate-1-semialdeh 99.7 6.4E-15 1.4E-19 147.4 29.5 340 82-458 52-429 (433)
278 PRK07812 O-acetylhomoserine am 99.7 4.5E-15 9.7E-20 148.4 27.9 164 120-318 61-230 (436)
279 PRK13237 tyrosine phenol-lyase 99.7 7.5E-15 1.6E-19 144.2 28.1 301 120-457 72-433 (460)
280 PF01041 DegT_DnrJ_EryC1: DegT 99.7 2.6E-15 5.6E-20 148.1 25.0 193 103-331 4-198 (363)
281 PRK05769 4-aminobutyrate amino 99.7 1.9E-14 4.1E-19 144.9 31.3 339 82-458 53-440 (441)
282 PRK05355 3-phosphoserine/phosp 99.7 3.1E-15 6.8E-20 146.7 24.8 312 98-457 10-358 (360)
283 PRK12389 glutamate-1-semialdeh 99.7 3.1E-14 6.7E-19 143.1 31.6 336 82-458 52-428 (428)
284 PRK05613 O-acetylhomoserine am 99.7 2.1E-14 4.5E-19 143.7 29.2 158 126-318 69-230 (437)
285 PLN02414 glycine dehydrogenase 99.7 4.8E-15 1E-19 158.9 25.3 289 129-457 571-907 (993)
286 PLN03226 serine hydroxymethylt 99.7 2.2E-14 4.7E-19 145.0 28.8 325 83-456 34-418 (475)
287 PRK11522 putrescine--2-oxoglut 99.7 2.2E-14 4.8E-19 144.6 28.6 340 82-458 81-452 (459)
288 TIGR03372 putres_am_tran putre 99.7 2.7E-14 5.8E-19 143.1 28.6 330 82-455 74-442 (442)
289 PRK08114 cystathionine beta-ly 99.7 3.9E-14 8.5E-19 139.2 27.5 213 126-392 62-281 (395)
290 TIGR01366 serC_3 phosphoserine 99.7 1.8E-14 3.9E-19 141.6 25.3 310 98-458 10-361 (361)
291 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 2.8E-14 6.1E-19 139.9 25.7 221 120-392 47-275 (386)
292 PRK04311 selenocysteine syntha 99.7 8.3E-14 1.8E-18 139.8 29.6 339 83-456 79-463 (464)
293 COG1103 Archaea-specific pyrid 99.7 5.3E-14 1.1E-18 125.0 24.1 284 128-458 63-381 (382)
294 PRK07046 aminotransferase; Val 99.7 1.9E-13 4E-18 137.8 31.5 334 82-458 74-451 (453)
295 PLN02880 tyrosine decarboxylas 99.7 2.1E-13 4.6E-18 138.5 31.8 317 120-458 112-485 (490)
296 KOG2862 Alanine-glyoxylate ami 99.7 9.1E-14 2E-18 125.9 25.6 312 102-458 28-383 (385)
297 PLN02271 serine hydroxymethylt 99.7 5.5E-14 1.2E-18 140.2 26.2 330 83-456 148-539 (586)
298 PRK06062 hypothetical protein; 99.7 2E-13 4.4E-18 137.7 30.3 339 82-458 52-446 (451)
299 KOG1360 5-aminolevulinate synt 99.7 5.8E-14 1.2E-18 131.0 23.7 313 103-458 187-525 (570)
300 PRK05639 4-aminobutyrate amino 99.6 3E-13 6.4E-18 136.5 31.1 338 82-458 52-444 (457)
301 PLN02263 serine decarboxylase 99.6 2E-13 4.4E-18 135.4 29.2 299 127-456 130-442 (470)
302 PRK07678 aminotransferase; Val 99.6 3.4E-13 7.4E-18 136.2 31.3 337 82-459 46-451 (451)
303 PLN02590 probable tyrosine dec 99.6 6.4E-13 1.4E-17 135.2 33.2 329 108-458 149-533 (539)
304 PF04864 Alliinase_C: Allinase 99.6 2.5E-15 5.3E-20 139.1 14.2 285 128-454 45-362 (363)
305 PRK07482 hypothetical protein; 99.6 4E-13 8.7E-18 136.0 31.5 340 82-458 49-455 (461)
306 PRK06943 adenosylmethionine--8 99.6 2.3E-13 4.9E-18 137.4 29.2 340 82-458 53-447 (453)
307 PRK07986 adenosylmethionine--8 99.6 1.8E-13 3.9E-18 136.9 27.8 342 82-457 42-423 (428)
308 PRK06173 adenosylmethionine--8 99.6 6.6E-13 1.4E-17 133.0 31.9 342 82-457 43-425 (429)
309 PRK13360 omega amino acid--pyr 99.6 2.7E-13 5.9E-18 136.5 28.6 343 82-458 45-441 (442)
310 COG0626 MetC Cystathionine bet 99.6 4.2E-13 9.1E-18 130.1 28.6 278 125-458 62-395 (396)
311 PRK06434 cystathionine gamma-l 99.6 3.3E-13 7.1E-18 132.8 27.6 213 125-392 63-279 (384)
312 PRK07030 adenosylmethionine--8 99.6 1E-12 2.2E-17 133.0 31.9 342 82-458 46-447 (466)
313 PRK06082 4-aminobutyrate amino 99.6 7E-13 1.5E-17 134.0 30.3 336 82-458 71-452 (459)
314 KOG1359 Glycine C-acetyltransf 99.6 8.7E-14 1.9E-18 124.9 20.9 317 83-458 67-413 (417)
315 PRK05965 hypothetical protein; 99.6 1.4E-12 3.1E-17 131.9 32.5 340 82-458 45-448 (459)
316 PRK09221 beta alanine--pyruvat 99.6 8.5E-13 1.8E-17 133.0 30.6 342 82-458 48-444 (445)
317 TIGR00474 selA seryl-tRNA(sec) 99.6 3.9E-13 8.4E-18 134.6 27.8 333 84-451 75-453 (454)
318 PRK07481 hypothetical protein; 99.6 9.3E-13 2E-17 133.0 30.8 342 82-458 41-446 (449)
319 PLN02760 4-aminobutyrate:pyruv 99.6 7.5E-13 1.6E-17 134.9 30.1 346 82-458 88-492 (504)
320 TIGR00508 bioA adenosylmethion 99.6 8.2E-13 1.8E-17 132.6 30.0 343 82-457 44-426 (427)
321 PRK06917 hypothetical protein; 99.6 6.3E-13 1.4E-17 134.0 29.0 343 82-458 30-438 (447)
322 PRK05630 adenosylmethionine--8 99.6 1.7E-12 3.6E-17 130.0 31.7 335 82-458 39-421 (422)
323 PRK06105 aminotransferase; Pro 99.6 7.7E-13 1.7E-17 133.9 29.5 340 82-458 47-450 (460)
324 PRK04013 argD acetylornithine/ 99.6 6.6E-13 1.4E-17 129.9 27.9 312 82-458 23-361 (364)
325 PRK08742 adenosylmethionine--8 99.6 2.4E-12 5.2E-17 130.2 32.7 343 82-458 63-468 (472)
326 PRK06916 adenosylmethionine--8 99.6 1.3E-12 2.9E-17 132.2 30.4 344 82-458 55-456 (460)
327 PRK07036 hypothetical protein; 99.6 1.2E-12 2.6E-17 132.5 29.6 341 82-458 50-453 (466)
328 PF01212 Beta_elim_lyase: Beta 99.6 1.1E-14 2.4E-19 137.5 13.5 252 103-392 8-271 (290)
329 PRK07483 hypothetical protein; 99.6 3E-12 6.4E-17 129.0 30.7 338 82-458 29-438 (443)
330 PRK12403 putative aminotransfe 99.6 3E-12 6.6E-17 129.5 30.7 340 82-458 53-453 (460)
331 KOG0053 Cystathionine beta-lya 99.6 5.6E-13 1.2E-17 127.5 23.4 170 127-333 78-251 (409)
332 PRK07480 putative aminotransfe 99.6 3.3E-12 7.1E-17 129.0 29.7 336 82-458 49-449 (456)
333 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 3.8E-14 8.3E-19 138.4 15.1 195 122-336 62-271 (417)
334 PRK06209 glutamate-1-semialdeh 99.6 2.2E-12 4.7E-17 129.8 28.2 330 82-458 47-406 (431)
335 PRK06938 diaminobutyrate--2-ox 99.6 4.6E-12 9.9E-17 128.2 30.6 343 82-458 62-461 (464)
336 COG0076 GadB Glutamate decarbo 99.6 8.8E-13 1.9E-17 131.9 25.0 282 100-410 72-378 (460)
337 COG0112 GlyA Glycine/serine hy 99.6 3.2E-12 7E-17 120.3 26.9 324 83-457 26-390 (413)
338 PRK08297 L-lysine aminotransfe 99.6 5.1E-12 1.1E-16 127.3 29.7 336 82-459 44-443 (443)
339 PRK06931 diaminobutyrate--2-ox 99.6 9.6E-12 2.1E-16 125.8 30.9 337 82-457 57-454 (459)
340 PRK15029 arginine decarboxylas 99.5 1.5E-12 3.3E-17 136.3 24.4 195 122-335 201-417 (755)
341 PRK06148 hypothetical protein; 99.5 6.8E-12 1.5E-16 137.9 30.0 335 82-458 623-1011(1013)
342 COG2873 MET17 O-acetylhomoseri 99.5 5.1E-12 1.1E-16 117.7 23.6 162 125-322 61-226 (426)
343 PRK06149 hypothetical protein; 99.5 6.8E-12 1.5E-16 137.9 28.9 337 82-458 584-971 (972)
344 TIGR03799 NOD_PanD_pyr putativ 99.5 1.3E-11 2.8E-16 125.8 28.5 262 120-409 119-435 (522)
345 KOG1401 Acetylornithine aminot 99.5 2.6E-11 5.7E-16 114.4 25.9 343 82-459 55-432 (433)
346 PF00464 SHMT: Serine hydroxym 99.5 5.9E-12 1.3E-16 122.6 22.0 321 84-451 21-399 (399)
347 COG0161 BioA Adenosylmethionin 99.5 2.9E-11 6.3E-16 118.1 25.7 344 82-457 43-443 (449)
348 TIGR01365 serC_2 phosphoserine 99.5 1.3E-11 2.8E-16 120.7 23.1 261 152-457 61-373 (374)
349 PRK15400 lysine decarboxylase 99.5 6.7E-12 1.5E-16 130.0 21.6 173 124-316 193-377 (714)
350 TIGR00461 gcvP glycine dehydro 99.5 4.4E-11 9.6E-16 127.2 27.5 299 120-457 517-867 (939)
351 PLN02452 phosphoserine transam 99.5 4.1E-11 8.9E-16 117.2 25.4 318 84-457 7-363 (365)
352 TIGR03251 LAT_fam L-lysine 6-t 99.5 7.5E-11 1.6E-15 118.7 28.1 334 82-454 37-431 (431)
353 PRK13578 ornithine decarboxyla 99.4 3.1E-11 6.7E-16 125.3 23.9 172 124-316 172-365 (720)
354 PRK05367 glycine dehydrogenase 99.4 3.4E-11 7.5E-16 130.1 24.9 295 127-457 539-875 (954)
355 TIGR00699 GABAtrns_euk 4-amino 99.4 2.3E-10 5E-15 115.1 28.0 334 82-455 57-464 (464)
356 TIGR02617 tnaA_trp_ase tryptop 99.4 3.9E-10 8.4E-15 109.8 27.8 329 83-457 41-441 (467)
357 PRK12566 glycine dehydrogenase 99.4 2.5E-10 5.3E-15 120.9 28.6 301 120-457 530-876 (954)
358 KOG1357 Serine palmitoyltransf 99.4 8.8E-12 1.9E-16 118.5 15.9 329 84-455 137-500 (519)
359 PRK15399 lysine decarboxylase 99.4 2.5E-10 5.4E-15 118.5 25.3 190 124-335 193-395 (713)
360 PF00282 Pyridoxal_deC: Pyrido 99.3 1E-10 2.2E-15 115.1 19.1 282 104-409 54-370 (373)
361 KOG1404 Alanine-glyoxylate ami 99.3 1.4E-09 3E-14 102.1 24.2 334 82-451 49-432 (442)
362 PRK12462 phosphoserine aminotr 99.3 7.8E-10 1.7E-14 107.2 22.9 317 85-457 5-362 (364)
363 COG1982 LdcC Arginine/lysine/o 99.3 9.6E-10 2.1E-14 109.8 23.7 184 128-335 72-262 (557)
364 PLN02974 adenosylmethionine-8- 99.3 5E-09 1.1E-13 111.7 30.6 343 84-455 366-816 (817)
365 PRK05367 glycine dehydrogenase 99.3 1.1E-09 2.4E-14 118.6 25.3 306 87-452 80-437 (954)
366 PF06838 Met_gamma_lyase: Meth 99.3 2E-09 4.3E-14 100.9 22.5 204 103-334 26-250 (403)
367 PF00202 Aminotran_3: Aminotra 99.2 6.3E-10 1.4E-14 108.5 18.5 221 82-324 15-262 (339)
368 PLN02414 glycine dehydrogenase 99.2 4.1E-09 8.9E-14 113.8 25.5 311 87-453 107-465 (993)
369 TIGR03811 tyr_de_CO2_Ent tyros 99.2 2.4E-08 5.2E-13 103.1 26.9 164 102-275 95-326 (608)
370 KOG1402 Ornithine aminotransfe 99.1 4.4E-08 9.5E-13 90.1 21.0 308 103-456 77-426 (427)
371 COG3033 TnaA Tryptophanase [Am 99.0 2.5E-07 5.5E-12 86.2 25.7 311 120-457 73-444 (471)
372 PLN02994 1-aminocyclopropane-1 99.0 1.1E-09 2.4E-14 93.1 6.7 65 120-188 86-152 (153)
373 KOG1383 Glutamate decarboxylas 99.0 1.3E-07 2.9E-12 91.0 20.7 275 156-458 143-447 (491)
374 KOG1403 Predicted alanine-glyo 98.9 6.9E-08 1.5E-12 87.7 16.0 319 103-456 63-436 (452)
375 COG1921 SelA Selenocysteine sy 98.9 5.3E-07 1.1E-11 86.6 22.7 234 84-349 21-261 (395)
376 COG3844 Kynureninase [Amino ac 98.9 6E-07 1.3E-11 82.8 20.2 285 130-458 80-403 (407)
377 COG1003 GcvP Glycine cleavage 98.8 3E-06 6.5E-11 81.3 24.8 299 120-457 96-447 (496)
378 KOG1358 Serine palmitoyltransf 98.8 2.4E-07 5.1E-12 87.3 15.7 324 82-457 93-465 (467)
379 KOG2467 Glycine/serine hydroxy 98.8 7E-06 1.5E-10 76.9 24.8 330 84-456 41-425 (477)
380 PF05889 SLA_LP_auto_ag: Solub 98.7 2.4E-06 5.2E-11 82.1 19.9 282 150-456 75-389 (389)
381 TIGR00461 gcvP glycine dehydro 98.7 6.2E-06 1.3E-10 88.6 24.0 302 87-452 68-426 (939)
382 PF03841 SelA: L-seryl-tRNA se 98.6 6.2E-08 1.3E-12 92.2 6.7 261 99-391 15-296 (367)
383 COG4100 Cystathionine beta-lya 98.6 7.9E-06 1.7E-10 74.6 19.5 169 125-324 64-251 (416)
384 PF02347 GDC-P: Glycine cleava 98.5 1.2E-05 2.5E-10 79.3 20.4 307 87-451 69-429 (429)
385 KOG0628 Aromatic-L-amino-acid/ 98.3 0.00043 9.4E-09 67.2 24.4 147 120-276 103-279 (511)
386 COG0403 GcvP Glycine cleavage 98.3 0.00081 1.8E-08 65.0 24.5 314 87-454 79-447 (450)
387 KOG0629 Glutamate decarboxylas 98.3 9.6E-05 2.1E-09 70.9 18.1 284 144-456 155-508 (510)
388 COG1932 SerC Phosphoserine ami 98.2 0.00045 9.8E-09 65.5 21.0 166 263-458 171-364 (365)
389 KOG1405 4-aminobutyrate aminot 98.0 0.00024 5.2E-09 66.6 15.4 212 215-458 254-484 (484)
390 PRK12566 glycine dehydrogenase 97.7 0.0075 1.6E-07 65.2 22.9 303 86-452 82-439 (954)
391 KOG3843 Predicted serine hydro 97.2 0.008 1.7E-07 54.4 13.0 171 193-385 119-295 (432)
392 PLN02672 methionine S-methyltr 96.7 0.059 1.3E-06 59.7 16.0 198 107-324 407-618 (1082)
393 KOG2040 Glycine dehydrogenase 96.3 0.045 9.8E-07 55.7 11.4 142 120-271 569-719 (1001)
394 KOG2790 Phosphoserine aminotra 95.5 1.2 2.5E-05 41.4 16.0 184 238-457 155-368 (370)
395 KOG3846 L-kynurenine hydrolase 94.3 4.7 0.0001 37.9 22.4 301 126-458 111-462 (465)
396 TIGR01470 cysG_Nterm siroheme 84.0 31 0.00068 30.9 15.8 94 149-270 9-103 (205)
397 PF10087 DUF2325: Uncharacteri 76.8 21 0.00046 27.5 8.1 71 186-268 11-81 (97)
398 COG1648 CysG Siroheme synthase 76.2 59 0.0013 29.3 15.7 94 148-270 11-106 (210)
399 COG0552 FtsY Signal recognitio 74.7 14 0.0003 35.5 7.6 107 157-270 146-268 (340)
400 PF02662 FlpD: Methyl-viologen 71.4 10 0.00023 30.9 5.3 59 199-262 29-90 (124)
401 COG1105 FruK Fructose-1-phosph 70.5 73 0.0016 30.5 11.4 51 216-270 116-167 (310)
402 cd06568 GH20_SpHex_like A subg 69.4 10 0.00022 36.9 5.7 69 191-266 24-92 (329)
403 cd02742 GH20_hexosaminidase Be 68.4 12 0.00026 35.8 5.9 68 191-266 22-89 (303)
404 COG0031 CysK Cysteine synthase 67.4 31 0.00067 32.8 8.2 56 147-206 59-116 (300)
405 PF05368 NmrA: NmrA-like famil 66.9 58 0.0012 29.4 10.0 78 176-267 21-99 (233)
406 cd06562 GH20_HexA_HexB-like Be 65.7 11 0.00024 36.9 5.2 64 191-266 24-87 (348)
407 COG2984 ABC-type uncharacteriz 64.6 1.2E+02 0.0026 29.1 11.4 144 104-270 45-196 (322)
408 COG2102 Predicted ATPases of P 64.3 98 0.0021 28.0 10.2 99 152-266 4-116 (223)
409 KOG2741 Dimeric dihydrodiol de 63.4 32 0.00069 33.2 7.4 76 186-275 60-135 (351)
410 cd06570 GH20_chitobiase-like_1 62.7 13 0.00029 35.7 5.0 61 192-266 25-85 (311)
411 COG0296 GlgB 1,4-alpha-glucan 62.3 12 0.00026 39.3 4.9 37 238-277 206-242 (628)
412 KOG1209 1-Acyl dihydroxyaceton 59.1 59 0.0013 29.3 7.8 86 149-242 7-93 (289)
413 KOG2040 Glycine dehydrogenase 59.0 2.5E+02 0.0054 29.9 22.6 150 88-267 123-281 (1001)
414 PF14258 DUF4350: Domain of un 58.5 35 0.00077 24.3 5.6 23 246-268 47-70 (70)
415 KOG1465 Translation initiation 57.3 1.6E+02 0.0034 28.0 10.5 110 149-275 162-277 (353)
416 PF09885 DUF2112: Uncharacteri 57.0 20 0.00043 29.2 4.2 48 407-458 94-143 (143)
417 cd06569 GH20_Sm-chitobiase-lik 56.7 27 0.00058 35.5 6.2 76 191-266 28-114 (445)
418 PRK08535 translation initiatio 56.6 1.9E+02 0.0041 27.8 12.0 118 130-268 105-228 (310)
419 TIGR03815 CpaE_hom_Actino heli 54.5 1.8E+02 0.0039 27.9 11.5 132 128-270 75-213 (322)
420 COG1184 GCD2 Translation initi 52.8 2.1E+02 0.0046 27.2 11.8 102 149-267 119-226 (301)
421 PLN02955 8-amino-7-oxononanoat 52.2 2.8E+02 0.0061 28.5 14.1 162 119-302 109-287 (476)
422 PF01408 GFO_IDH_MocA: Oxidore 51.5 50 0.0011 26.1 6.1 68 187-267 51-118 (120)
423 TIGR02104 pulA_typeI pullulana 50.2 16 0.00034 38.8 3.5 36 237-275 220-255 (605)
424 PRK05234 mgsA methylglyoxal sy 49.5 99 0.0021 25.9 7.5 82 177-270 32-114 (142)
425 TIGR03271 methan_mark_5 putati 49.1 32 0.0007 27.9 4.2 48 407-458 93-142 (142)
426 cd06563 GH20_chitobiase-like T 49.0 41 0.00089 33.1 6.0 75 193-267 26-104 (357)
427 PLN02970 serine racemase 47.9 96 0.0021 30.0 8.3 54 150-206 76-129 (328)
428 COG2515 Acd 1-aminocyclopropan 47.9 2.5E+02 0.0054 26.8 10.4 104 152-260 66-177 (323)
429 smart00642 Aamy Alpha-amylase 47.5 27 0.00059 30.1 4.0 28 248-275 69-96 (166)
430 cd06449 ACCD Aminocyclopropane 47.4 98 0.0021 29.6 8.3 17 190-206 100-116 (307)
431 COG4050 Uncharacterized protei 47.0 36 0.00077 27.1 4.1 48 407-458 98-147 (152)
432 PF00728 Glyco_hydro_20: Glyco 46.9 16 0.00034 35.7 2.8 67 191-266 24-90 (351)
433 COG0156 BioF 7-keto-8-aminopel 46.9 3.1E+02 0.0067 27.3 15.8 157 119-300 46-207 (388)
434 PF04413 Glycos_transf_N: 3-De 46.4 2E+02 0.0043 25.2 9.4 100 151-270 22-126 (186)
435 TIGR00064 ftsY signal recognit 46.3 2.4E+02 0.0052 26.5 10.5 22 249-270 174-201 (272)
436 KOG1467 Translation initiation 46.2 2.7E+02 0.0059 28.4 10.8 128 126-270 325-470 (556)
437 TIGR00511 ribulose_e2b2 ribose 46.1 2.7E+02 0.006 26.6 12.3 118 129-267 99-222 (301)
438 PRK08246 threonine dehydratase 45.8 2.1E+02 0.0047 27.3 10.3 74 125-205 48-121 (310)
439 COG0647 NagD Predicted sugar p 45.3 2.7E+02 0.0058 26.2 11.7 141 103-257 26-179 (269)
440 PRK06500 short chain dehydroge 44.5 2E+02 0.0044 25.9 9.7 48 157-206 11-59 (249)
441 TIGR00524 eIF-2B_rel eIF-2B al 43.4 3E+02 0.0066 26.3 11.4 80 178-268 153-237 (303)
442 COG1909 Uncharacterized protei 42.9 1.3E+02 0.0028 25.7 7.1 77 238-334 84-161 (167)
443 cd06448 L-Ser-dehyd Serine deh 42.6 1.6E+02 0.0035 28.3 8.9 54 150-206 52-105 (316)
444 PRK08638 threonine dehydratase 42.6 1.1E+02 0.0023 29.8 7.8 53 150-205 76-128 (333)
445 cd01563 Thr-synth_1 Threonine 42.3 1.5E+02 0.0032 28.5 8.7 54 150-206 71-124 (324)
446 PRK10886 DnaA initiator-associ 42.2 2.3E+02 0.0051 25.1 9.2 34 228-268 109-142 (196)
447 COG0134 TrpC Indole-3-glycerol 42.2 1E+02 0.0022 28.6 7.0 73 176-256 155-227 (254)
448 cd01562 Thr-dehyd Threonine de 42.2 1.4E+02 0.003 28.4 8.4 54 150-206 66-119 (304)
449 PRK08265 short chain dehydroge 41.8 2.2E+02 0.0048 26.1 9.6 94 157-256 11-108 (261)
450 PRK06483 dihydromonapterin red 41.5 2.4E+02 0.0051 25.3 9.6 43 157-201 7-50 (236)
451 KOG3974 Predicted sugar kinase 40.6 1.7E+02 0.0037 27.2 7.9 106 150-270 31-140 (306)
452 PRK07476 eutB threonine dehydr 40.5 2.4E+02 0.0052 27.1 9.9 52 152-206 70-121 (322)
453 PRK05638 threonine synthase; V 39.9 1.4E+02 0.0031 30.3 8.4 53 150-205 113-165 (442)
454 PLN02565 cysteine synthase 39.3 2E+02 0.0044 27.7 9.1 51 152-205 70-120 (322)
455 PLN02556 cysteine synthase/L-3 38.2 1.9E+02 0.0042 28.5 8.9 84 152-243 114-197 (368)
456 TIGR00289 conserved hypothetic 37.9 2.9E+02 0.0064 25.0 9.2 96 157-266 7-115 (222)
457 PLN03244 alpha-amylase; Provis 37.9 53 0.0011 35.6 5.0 41 237-277 429-469 (872)
458 COG2089 SpsE Sialic acid synth 37.7 2.9E+02 0.0062 26.7 9.2 29 178-206 103-131 (347)
459 PRK06815 hypothetical protein; 37.2 1.7E+02 0.0036 28.2 8.1 54 150-206 69-122 (317)
460 cd07476 Peptidases_S8_thiazoli 37.0 99 0.0021 28.9 6.4 69 198-267 74-143 (267)
461 PRK06372 translation initiatio 36.8 3.5E+02 0.0076 25.1 11.6 100 150-267 87-190 (253)
462 PTZ00081 enolase; Provisional 36.7 2E+02 0.0044 29.1 8.8 96 163-268 283-382 (439)
463 TIGR02402 trehalose_TreZ malto 36.6 56 0.0012 34.2 5.0 35 239-276 153-187 (542)
464 KOG2865 NADH:ubiquinone oxidor 36.4 3.9E+02 0.0084 25.5 9.7 102 150-264 61-170 (391)
465 PLN03013 cysteine synthase 36.4 2.4E+02 0.0052 28.5 9.2 52 152-206 178-229 (429)
466 cd01422 MGS Methylglyoxal synt 36.2 2.2E+02 0.0048 22.7 10.7 79 177-267 27-106 (115)
467 TIGR01761 thiaz-red thiazoliny 35.8 1.8E+02 0.0039 28.4 8.1 71 185-268 51-121 (343)
468 PLN00191 enolase 35.7 2.6E+02 0.0057 28.5 9.4 99 159-269 296-395 (457)
469 PF00128 Alpha-amylase: Alpha 35.5 32 0.00069 32.5 2.9 29 248-276 51-79 (316)
470 KOG1201 Hydroxysteroid 17-beta 35.4 4E+02 0.0087 25.4 11.8 103 147-257 36-144 (300)
471 PRK11889 flhF flagellar biosyn 35.3 4.8E+02 0.01 26.3 11.5 52 215-270 304-361 (436)
472 cd01561 CBS_like CBS_like: Thi 34.9 1.4E+02 0.0031 28.2 7.2 53 151-206 55-107 (291)
473 PF05687 DUF822: Plant protein 34.7 1.7E+02 0.0036 24.4 6.3 40 381-432 27-66 (150)
474 TIGR02012 tigrfam_recA protein 34.7 2.6E+02 0.0055 27.1 8.8 42 411-455 263-305 (321)
475 TIGR00290 MJ0570_dom MJ0570-re 34.6 3.6E+02 0.0077 24.5 9.8 96 157-266 7-115 (223)
476 PRK14045 1-aminocyclopropane-1 34.4 1E+02 0.0023 29.8 6.2 15 192-206 113-127 (329)
477 PF04019 DUF359: Protein of un 34.3 2.5E+02 0.0055 22.7 7.4 32 238-270 39-71 (121)
478 PRK05562 precorrin-2 dehydroge 34.2 3.6E+02 0.0078 24.5 11.1 94 149-270 25-119 (223)
479 COG0352 ThiE Thiamine monophos 34.0 80 0.0017 28.4 4.9 50 216-270 24-73 (211)
480 PF13460 NAD_binding_10: NADH( 33.7 2.3E+02 0.0049 24.1 7.9 86 158-263 4-90 (183)
481 PF03652 UPF0081: Uncharacteri 33.6 1.4E+02 0.003 24.7 6.0 62 211-274 35-100 (135)
482 KOG4589 Cell division protein 33.5 3.3E+02 0.0071 24.2 8.2 43 215-259 121-164 (232)
483 cd02067 B12-binding B12 bindin 33.4 2.4E+02 0.0052 22.2 7.6 57 192-261 21-77 (119)
484 TIGR01501 MthylAspMutase methy 33.1 1.5E+02 0.0033 24.5 6.1 60 191-263 22-81 (134)
485 PLN02460 indole-3-glycerol-pho 32.9 55 0.0012 31.7 3.9 79 179-267 157-235 (338)
486 PRK06463 fabG 3-ketoacyl-(acyl 32.8 2.8E+02 0.006 25.2 8.7 25 157-183 12-37 (255)
487 PRK10785 maltodextrin glucosid 32.7 1.6E+02 0.0035 31.3 7.7 64 213-276 175-253 (598)
488 PRK12936 3-ketoacyl-(acyl-carr 32.6 3.6E+02 0.0078 24.0 9.5 92 157-255 11-108 (245)
489 TIGR02102 pullulan_Gpos pullul 32.5 49 0.0011 37.7 3.9 36 237-275 546-581 (1111)
490 PF04392 ABC_sub_bind: ABC tra 32.3 3.2E+02 0.0068 25.8 9.1 143 103-267 13-165 (294)
491 PRK09354 recA recombinase A; P 32.3 3.4E+02 0.0073 26.6 9.2 58 149-206 59-117 (349)
492 TIGR01137 cysta_beta cystathio 32.2 3.2E+02 0.007 27.6 9.7 54 150-206 63-116 (454)
493 TIGR00649 MG423 conserved hypo 32.2 5.3E+02 0.011 25.9 11.2 74 176-263 318-401 (422)
494 COG1519 KdtA 3-deoxy-D-manno-o 32.0 5.4E+02 0.012 25.8 10.8 121 129-270 28-154 (419)
495 PRK07048 serine/threonine dehy 31.6 2.2E+02 0.0047 27.4 7.9 54 150-206 73-126 (321)
496 PF01008 IF-2B: Initiation fac 31.5 2.6E+02 0.0057 26.2 8.4 120 129-268 91-216 (282)
497 PRK00278 trpC indole-3-glycero 31.4 1.3E+02 0.0028 28.0 6.1 58 203-270 111-168 (260)
498 PRK08329 threonine synthase; V 31.4 2E+02 0.0044 28.0 7.7 54 150-206 105-158 (347)
499 cd06564 GH20_DspB_LnbB-like Gl 31.3 50 0.0011 31.9 3.5 26 241-266 74-99 (326)
500 COG2102 Predicted ATPases of P 30.9 2.4E+02 0.0052 25.5 7.3 70 191-266 105-177 (223)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-67 Score=485.92 Aligned_cols=395 Identities=53% Similarity=0.915 Sum_probs=379.1
Q ss_pred cCCCCCCCCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHH
Q 012628 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (459)
Q Consensus 59 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~ 138 (459)
|++++..++|||+++.+.+++|+++++|||++|.|.|+.+.+|+.+.|.+|-+..++......|.|..|.+.++++++++
T Consensus 2 F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~l 81 (396)
T COG1448 2 FEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKL 81 (396)
T ss_pred ccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999988776678999999999999999999
Q ss_pred HhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHH
Q 012628 139 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEG 218 (459)
Q Consensus 139 l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~ 218 (459)
+++.....+..++|..+||.|||||+.++++++..+.|..+|++++|+|++|..+++..|.++..+|+.+.++..+|++.
T Consensus 82 lFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~ 161 (396)
T COG1448 82 LFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDG 161 (396)
T ss_pred hcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHH
Confidence 99987777888999999999999999999999999999899999999999999999999999999999988888999999
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012628 219 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (459)
Q Consensus 219 l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (459)
+.+.++..+++.+++++.++|||||..++.++|++|+++.++++++.+.|-|||+|+.+ .+.|.+.++.++.....+++
T Consensus 162 mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lv 240 (396)
T COG1448 162 MLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLV 240 (396)
T ss_pred HHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999987 88999999999988888999
Q ss_pred EEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
+.||||+||+.|.|+|++.+++.+.+...++.+++....|..|++||..++.+++.+|+++++..+|.++++.++.++.+
T Consensus 241 a~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~ 320 (396)
T COG1448 241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILE 320 (396)
T ss_pred EehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCcccccCCcceeeecCCCHHHHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHHHHHH
Q 012628 379 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l~~~~ 455 (459)
+|+.|.+.|+ +.+-+.+|+++..+.|||.++|++++++.+|.+++||+++..||||++++++.++++++++|.+++
T Consensus 321 mR~~lv~~L~-~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ni~~va~ai~~v~ 396 (396)
T COG1448 321 MRQALVDALK-ALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAVL 396 (396)
T ss_pred HHHHHHHHHH-hhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCCeeeeccCChhhHHHHHHHHHhhC
Confidence 9999999999 887777899999999999999999999999999999999999999999999999999999998763
No 2
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-64 Score=456.91 Aligned_cols=402 Identities=60% Similarity=1.016 Sum_probs=389.0
Q ss_pred ccccCCCCCCCCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHH
Q 012628 56 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 135 (459)
Q Consensus 56 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~ai 135 (459)
.+++++|++.|||||+++.++|++|+++.+|||++|.|+|+++.|++.|.|.+|.++........+|.|+.|+++|.+..
T Consensus 25 ~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~s 104 (427)
T KOG1411|consen 25 SSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLS 104 (427)
T ss_pred cchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999988766678999999999999999
Q ss_pred HHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCC
Q 012628 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (459)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d 215 (459)
++++.+.....+..++|+.+|+.+||+++.+.+.+++.+.++..|.+|+|+|.++.++++.+|+.+..+.+++..+.++|
T Consensus 105 akLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld 184 (427)
T KOG1411|consen 105 AKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLD 184 (427)
T ss_pred HHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccc
Confidence 99999998888889999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCe
Q 012628 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGME 295 (459)
Q Consensus 216 ~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 295 (459)
++.+.+.+.+.++...++++.+.|||||+..+.++|++|.++.++++.+.+.|.+||+|..++.+.|.++++.|++.+.+
T Consensus 185 ~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~ 264 (427)
T KOG1411|consen 185 FKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHE 264 (427)
T ss_pred hHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 012628 296 LLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGR 375 (459)
Q Consensus 296 ~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 375 (459)
++++.||.|++|+.|.|+|.+.++|.+.+...++.++++.+.+.++++||..+++++..+|+++++..+|..+++.+.++
T Consensus 265 ~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadR 344 (427)
T KOG1411|consen 265 ILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADR 344 (427)
T ss_pred eEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCCHHHHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHHHHHH
Q 012628 376 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 376 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l~~~~ 455 (459)
+...|+.|.+.|+ +.|.+.+|+++..+-|+|+|+|+++++++.|.+++.|+++..||||+++++..++.+++++|.++.
T Consensus 345 i~~mR~~L~d~L~-~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT~dGRiS~aG~ss~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 345 IISMRQQLFDALE-KEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLTKDGRISMAGLSSSNVPYLADAIHAVT 423 (427)
T ss_pred hhhhHHHHhHHhh-cCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeeccCceEeeccccccCCcccchhhHhHh
Confidence 9999999999999 998889999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhc
Q 012628 456 HNV 458 (459)
Q Consensus 456 ~~~ 458 (459)
+..
T Consensus 424 k~~ 426 (427)
T KOG1411|consen 424 KNT 426 (427)
T ss_pred cCC
Confidence 754
No 3
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.9e-61 Score=481.32 Aligned_cols=422 Identities=64% Similarity=1.064 Sum_probs=351.9
Q ss_pred cccccccccccchhhhhhccccccCCCCCCCCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhh
Q 012628 36 TAGFIKTKSFGRVSMVAAVNVSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLE 115 (459)
Q Consensus 36 ~~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~ 115 (459)
++||.+.+++.+-+|+.....+.|+++...++++|..+.+.++.+..+.+++|+.|.+.+..++|.+.+.+.++....+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~ 80 (423)
T PLN02397 1 SNPFLKAKSRSRSSMAAAAASSRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLA 80 (423)
T ss_pred CCcccccccccccchhhhhhhhHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhc
Confidence 36788888899999987766677999999999999998888877777789999999754666666556777777766554
Q ss_pred cCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh
Q 012628 116 RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN 195 (459)
Q Consensus 116 ~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~ 195 (459)
.+...+|++..|.++||+++++++.+.++....+++|..+++.+|+++..++..++..+.|||+|++++|+|+.|...++
T Consensus 81 ~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~ 160 (423)
T PLN02397 81 GSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFR 160 (423)
T ss_pred cCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH
Confidence 34445899999999999999999877655444455665556788888877665566666799999999999999999999
Q ss_pred hCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012628 196 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (459)
Q Consensus 196 ~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~ 275 (459)
.+|++++.+|+.+++++++|++.+++.+....++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.
T Consensus 161 ~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~ 240 (423)
T PLN02397 161 DAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFA 240 (423)
T ss_pred HcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCcc
Confidence 99999999998544468999999998887543478899999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHH
Q 012628 276 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 355 (459)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (459)
+++...+..++..+....+++++++||||.|+++|||+||+++++++++.++.+.+.+....+..+.+++.++|.++..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~ 320 (423)
T PLN02397 241 SGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATI 320 (423)
T ss_pred CCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHH
Confidence 75311123344444444457999999999999999999999654667776666776666666566667888999999999
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCCHHHHHHHHhcccEEEcCCCcEE
Q 012628 356 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRIS 435 (459)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis 435 (459)
|+++++.+.|.++++++++.++++|+.+.+.|+ ++|.+..|++..|+||||+|++++.+++++|++++||++.++|||+
T Consensus 321 L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~-~~~~~~~~~~~~p~gg~fl~~~l~~~~~~~Ll~~~~V~v~~~~Ri~ 399 (423)
T PLN02397 321 LGDPELFSEWTKELKGMADRIISMRQKLYDALE-ARGSPGDWSHITKQIGMFSFTGLNKEQVDRMTKEYHIYMTRDGRIS 399 (423)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCCCcccCCceEEEecCCCHHHHHHHHHhCCEEECCCCeEE
Confidence 999888888888899999999999999999999 8875555788889999999999998999999999999999999999
Q ss_pred EccCChhhHHHHHHHHHHHHhhc
Q 012628 436 LAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 436 ~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+++.+++++++++++|++++...
T Consensus 400 ~~~~~~~~i~~~~~~i~~~~~~~ 422 (423)
T PLN02397 400 MAGLSSKNVPYLADAIHAVVTNA 422 (423)
T ss_pred EeeCCHHHHHHHHHHHHHHHhcc
Confidence 99789999999999999998743
No 4
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-59 Score=416.92 Aligned_cols=402 Identities=47% Similarity=0.835 Sum_probs=382.1
Q ss_pred ccccCCCCCCCCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhc-CCCCCCCCCcccHHHHHH
Q 012628 56 VSRFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKEYLPIEGLAAFNKV 134 (459)
Q Consensus 56 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~~g~~~lr~a 134 (459)
++.|..++..+|+.++.+.+.++.+..+.++||++|.|+++++.||+.|.|+++-..+.++ ...++|.|..|.+.|+++
T Consensus 3 ~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~ 82 (410)
T KOG1412|consen 3 MSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKA 82 (410)
T ss_pred cchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhh
Confidence 3689999999999999999999989899999999999999999999999999988887644 356899999999999999
Q ss_pred HHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCC-CeeeeeeecCCCCC
Q 012628 135 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV-PWSEYRYYDPKTVG 213 (459)
Q Consensus 135 ia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~-~v~~v~~~~~~~~~ 213 (459)
.++.+.+.....+.++++.-+|+.+||||+.+++.++..+.+..+|.+..|+|.++..+++..|+ ++..+++-+.+.-.
T Consensus 83 A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~ 162 (410)
T KOG1412|consen 83 ATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKC 162 (410)
T ss_pred hHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCce
Confidence 99999999888888999999999999999999999999999889999999999999999999994 57788887777889
Q ss_pred CCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012628 214 LDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (459)
Q Consensus 214 ~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (459)
+|++.+...++..|+...++++.+.|||||..+++++|.+|+++.++++++.+.|-+||+|..++.+.|.|.++.+++.+
T Consensus 163 ~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g 242 (410)
T KOG1412|consen 163 VDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQG 242 (410)
T ss_pred ecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcC
Confidence 99999999999999888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHH
Q 012628 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 373 (459)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 373 (459)
..++++.||+|+||+.+.|+|-+.++..++..+..+.+++..+++..+++||..+++++..+|+.+++.++|.+.++.+.
T Consensus 243 ~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~Ms 322 (410)
T KOG1412|consen 243 FELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMS 322 (410)
T ss_pred CeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCCHHHHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHHHH
Q 012628 374 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIID 453 (459)
Q Consensus 374 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l~~ 453 (459)
.++++.|..|++.|. .++.|+.|+++..+.|+|.|+|+++..++.|.++|+|++.+.|||++++++..++|++.++|.+
T Consensus 323 sRI~~MR~aLrd~L~-aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~GRInisGLN~~NveyVAkAIde 401 (410)
T KOG1412|consen 323 SRIKKMRTALRDHLV-ALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDGRINISGLNMKNVEYVAKAIDE 401 (410)
T ss_pred HHHHHHHHHHHHHHH-hcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCCcEeeeccccccHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 012628 454 SYHNV 458 (459)
Q Consensus 454 ~~~~~ 458 (459)
.+..+
T Consensus 402 ~Vr~~ 406 (410)
T KOG1412|consen 402 TVRAI 406 (410)
T ss_pred HHHhh
Confidence 98764
No 5
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-58 Score=462.59 Aligned_cols=398 Identities=56% Similarity=0.985 Sum_probs=324.6
Q ss_pred cCCCCCCCCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHH
Q 012628 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (459)
Q Consensus 59 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~ 138 (459)
+.++...+++++.++.+.++.+.+++++||+.|.|.|..+...+.+.+.+++.+.+......+|+|..|.++||++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 84 (404)
T PTZ00376 5 FSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKL 84 (404)
T ss_pred hhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHH
Confidence 55666667777877777676554568999999997333332222345555555444323347899999999999999999
Q ss_pred HhcCCCCccccCceEEeecccchhHHHHHHHHHH-HhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHH
Q 012628 139 LFGADNSVLKEQRVATVQGLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFE 217 (459)
Q Consensus 139 l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~-~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e 217 (459)
+.+.++..+++++|++.+|.|+++++.++..++. .+.|||+|++++|+|+.|...++..|++++.+|+.+++++++|++
T Consensus 85 ~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~ 164 (404)
T PTZ00376 85 LFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFD 164 (404)
T ss_pred hcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHH
Confidence 8777666678899985559999999999855443 356999999999999999999999999999999954556899999
Q ss_pred HHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEE
Q 012628 218 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (459)
Q Consensus 218 ~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 297 (459)
.++++++...++++++++|+||||||.++|.+++++|+++|++||++||+||+|.++.+++...+..++..+....++++
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi 244 (404)
T PTZ00376 165 GMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFL 244 (404)
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEE
Confidence 99999975334578888999999999999999999999999999999999999999987531112233434333445899
Q ss_pred EEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012628 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 377 (459)
Q Consensus 298 ~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (459)
+++||||.|+++|||+||+++++.+++..+.+.+.+....+..+.+++.++|.++..+|+++++.+.|.+++++.+++++
T Consensus 245 ~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 324 (404)
T PTZ00376 245 VAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQ 324 (404)
T ss_pred EEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999996546688877777776665555556677888999999999998877778888899999999
Q ss_pred HHHHHHHHHHhhccCCCCCcccccCCcceeeecCCCHHHHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHHHHHHhh
Q 012628 378 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 378 ~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
++++.+.+.|+ +++.+..|.+..++||||+|++++.+++++|++++||.+.||||||+++++.+++++++++|++++..
T Consensus 325 ~~r~~l~~~L~-~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~L~~~~~v~v~p~~Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 325 NMRQLLYDELK-ALGSPGDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred HHHHHHHHHHH-hcCCCCcccccccCceEEEecCCCHHHHHHHHHhCCEeecCCCeEEEeccCHHhHHHHHHHHHHHHhc
Confidence 99999999999 87655446677899999999999999999999999999999999999877999999999999998864
No 6
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=7.6e-58 Score=456.38 Aligned_cols=393 Identities=50% Similarity=0.870 Sum_probs=323.5
Q ss_pred cCCCCCCCCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHH
Q 012628 59 FEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAEL 138 (459)
Q Consensus 59 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~ 138 (459)
++++...+++++..+...++.+..+++|||+.|.|.+++..++..+.+.+++.+.+......+|++..|.++||++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 81 (396)
T PRK09257 2 FEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL 81 (396)
T ss_pred cccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence 45566677778877776666544568999999987444333333478899988877544446899999999999999999
Q ss_pred HhcCCCCccccCce--EEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCH
Q 012628 139 LFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (459)
Q Consensus 139 l~~~~~~~~~~~~i--~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~ 216 (459)
+.+.++..+++++| ++ |+|+++++.++..++..+.|||+|++++|+|+.|...++..|++++.+|+.+++++++|+
T Consensus 82 ~~~~~~~~~~~~~i~v~i--T~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~ 159 (396)
T PRK09257 82 LFGADSPALAAGRVATVQ--TPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDF 159 (396)
T ss_pred hcCCCCcccccCeEEEEe--cCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCH
Confidence 98776666678887 77 999999999986555556899999999999999999999999999999984445689999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeE
Q 012628 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (459)
Q Consensus 217 e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (459)
+.++++++..+++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.++. +.+..++..+....+++
T Consensus 160 ~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~~~~~~~~~~~~~~v 238 (396)
T PRK09257 160 DAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGL-EEDAYGLRAFAAAGLEL 238 (396)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccch-HHHHHHHHHHHhcCCcE
Confidence 99999987544457888889999999999999999999999999999999999999998641 11234444444445689
Q ss_pred EEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012628 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 376 (459)
Q Consensus 297 i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 376 (459)
++++||||.|+++|||+||+++++++++....+...+....+..+.+++.+.|.++..+|.++++.+.|.+++++++++|
T Consensus 239 i~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~ 318 (396)
T PRK09257 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERI 318 (396)
T ss_pred EEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999654556665555666665554455667788999999999999887777888999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCCHHHHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHHHHHH
Q 012628 377 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 377 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l~~~~ 455 (459)
+++++.+.+.|+ +++.+..+++..|+||||+|++++.+++.++++++||.+.|.|||+|++++++++++++++|++++
T Consensus 319 ~~rr~~l~~~L~-~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~l~~~~~V~~~p~~ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 319 KAMRQLLVEALK-AKGPSRDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred HHHHHHHHHHHH-hcCCCCCcccccccceEEEecCCCHHHHHHHHHcCCEEEcCCCeEEEeeCCHHHHHHHHHHHHhhC
Confidence 999999999999 875333467888999999999999889999999999999999999999889999999999998763
No 7
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-57 Score=444.99 Aligned_cols=346 Identities=19% Similarity=0.236 Sum_probs=298.4
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCc-eEEeecccch
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGLSGT 161 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~-i~~~~t~ggt 161 (459)
.++|+|++|+| +++. |+.+.+++.+++..+.. .|++..|.++||++|++++.+.++..+++++ |++ |.|++
T Consensus 28 ~~vi~l~iG~P----d~~~-p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiiv--t~Ga~ 99 (393)
T COG0436 28 EDVIDLSIGEP----DFPT-PEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIV--TAGAK 99 (393)
T ss_pred CCEEEeCCCCC----CCCC-CHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCCHH
Confidence 57999999999 6664 88899999998876532 7889999999999999999999998888877 999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecC-CCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~-~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
+++.++ +...+.|||+|++++|.|+.|...++.+|++++.+|++.+ ++|.+|++.+++++++ +++++++|+|||
T Consensus 100 ~al~~~--~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~---ktk~i~ln~P~N 174 (393)
T COG0436 100 EALFLA--FLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP---KTKAIILNSPNN 174 (393)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc---cceEEEEeCCCC
Confidence 999998 5666889999999999999999999999999999998544 4899999999999997 899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++++++++|+++|++||++||+||+|.++.|++. ...++..+....+++++++||||.|+|+|||+||+++
T Consensus 175 PTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~--~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~-- 250 (393)
T COG0436 175 PTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA--EHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVG-- 250 (393)
T ss_pred CcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC--CcCCHhhcCCCcceEEEEecccccccccccceeEeec--
Confidence 999999999999999999999999999999999999752 2334434333347899999999999999999999955
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
++++ +.+.+.+++.....+++.++|.++..+|++++. . ..++++++.|+++|+.+.+.|. +++ +|++.
T Consensus 251 ~~~~----l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~---~~~~~~~~~~~~rrd~l~~~l~-~~~---g~~~~ 318 (393)
T COG0436 251 PPEE----LIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-D---EVVEEMREEYRERRDLLVEALN-EIG---GLSVV 318 (393)
T ss_pred ChHH----HHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc-h---HHHHHHHHHHHHHHHHHHHHHH-hcC---Ceeec
Confidence 3366 455555556667779999999999999998743 1 2357777999999999999999 875 26788
Q ss_pred c-CCcceeeecCCC-----HHHHHHHHhcccEEEcCC-------C----cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 401 L-RQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 401 ~-~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g-------g----Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
. |+|+||+|++++ .+++.+|++++||.++|| | |||++. +++++++++++|.+.++..
T Consensus 319 ~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 319 KPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLAEY 392 (393)
T ss_pred cCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHHhc
Confidence 7 889999999663 578999999999999997 2 999998 6799999999999998765
No 8
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.4e-50 Score=404.89 Aligned_cols=358 Identities=16% Similarity=0.154 Sum_probs=292.9
Q ss_pred CCCCCCCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHh
Q 012628 61 GVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLF 140 (459)
Q Consensus 61 ~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~ 140 (459)
++...+++.+..+..... ..++|+|+.|.| ..++ ++.+.+++.+.+..+ ..+|++..|.++||+++++++.
T Consensus 35 ~~~~~~~~~~~~~~~~~~---~~~~i~l~~G~P----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~ 105 (413)
T PLN00175 35 RLEKFKTTIFTQMSSLAI---KHGAINLGQGFP----NFDG-PDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFK 105 (413)
T ss_pred HhhcCCCCHHHHHHHHhh---cCCeEecCCCCC----CCCC-CHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHH
Confidence 344445555555444332 358999999999 4443 788899998888654 3789999999999999999998
Q ss_pred cCCCCccccC-ceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHH
Q 012628 141 GADNSVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM 219 (459)
Q Consensus 141 ~~~~~~~~~~-~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l 219 (459)
..++..++++ +|++ |+|+++++.++ +...+.|||+|++++|+|..|...++..|++++.+|+++ +++.+|++.+
T Consensus 106 ~~~g~~~~~~~~I~v--t~G~~~al~~~--~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~~l 180 (413)
T PLN00175 106 KDTGLVVDPEKEVTV--TSGCTEAIAAT--ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRP-PDFAVPEDEL 180 (413)
T ss_pred HHhCCCCCCCCCEEE--eCCHHHHHHHH--HHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCc-ccCCCCHHHH
Confidence 8888888887 7999 99999999988 444578999999999999999999999999999999963 3488999999
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012628 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (459)
Q Consensus 220 ~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (459)
++.+.+ +++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++ +..++..+....++++++
T Consensus 181 ~~~~~~---~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~---~~~s~~~~~~~~~~vi~i 254 (413)
T PLN00175 181 KAAFTS---KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG---DHISMASLPGMYERTVTM 254 (413)
T ss_pred HHhcCc---CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC---cccChhhCCCCcCcEEEE
Confidence 999875 67888899999999999999999999999999999999999999998753 222333333334689999
Q ss_pred EcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012628 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 379 (459)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 379 (459)
+||||.|+++|||+||+++ ++++++.+.. .......+++.+.|.++..+|+++ ..++++.++.|+++
T Consensus 255 ~SfSK~~~~~G~RiG~~v~---~~~l~~~l~~----~~~~~~~~~s~~~Q~a~~~~l~~~------~~~~~~~~~~~~~~ 321 (413)
T PLN00175 255 NSLGKTFSLTGWKIGWAIA---PPHLTWGVRQ----AHSFLTFATATPMQWAAVAALRAP------ESYYEELKRDYSAK 321 (413)
T ss_pred ecchhhccCcchheeeeEe---CHHHHHHHHH----HHhhccCCCCHHHHHHHHHHHhCC------HHHHHHHHHHHHHH
Confidence 9999999999999999976 8875554433 333334477888999999998765 23478899999999
Q ss_pred HHHHHHHHhhccCCCCCcccccCCcceeeecCC------C-HHHHHHHHhcccEEEcCC---------C----cEEEccC
Q 012628 380 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKD---------G----RISLAGL 439 (459)
Q Consensus 380 ~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l------~-~~~~~~ll~~~gI~v~~g---------g----Ris~~~~ 439 (459)
++.+.+.|+ +.| +.+..|+||+|+|+.+ + .++++.|++++||.+.|| + ||+|+.
T Consensus 322 ~~~l~~~L~-~~g----~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~- 395 (413)
T PLN00175 322 KDILVEGLK-EVG----FKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK- 395 (413)
T ss_pred HHHHHHHHH-HCC----CeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-
Confidence 999999999 876 5778899999999854 2 366788888889999986 1 999997
Q ss_pred ChhhHHHHHHHHHHHHhh
Q 012628 440 SLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 440 ~~e~i~~~~~~l~~~~~~ 457 (459)
+++++++++++|.+.+++
T Consensus 396 ~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 396 DEETLRAAVERMKTKLKR 413 (413)
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 899999999999998864
No 9
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-51 Score=380.20 Aligned_cols=365 Identities=15% Similarity=0.098 Sum_probs=293.2
Q ss_pred ccCCCCCCCCCccchhHHHhhhCCCCCcee-ecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHH
Q 012628 58 RFEGVTMAPPDPILGVSEAFKADTDEKKLN-LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 136 (459)
Q Consensus 58 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~-l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia 136 (459)
+.+++....++..-++....-+ ....+ |+.|.| ..|+ |+.|.++++++......++|++..|.++|+++++
T Consensus 8 ~~~~l~~~~~~vw~e~~~la~e---~~~~~~LgqGfp----~~~~-P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~ 79 (420)
T KOG0257|consen 8 RNRNLSTSKPYVWTEINRLAAE---HKVPNPLGQGFP----DFPP-PKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALA 79 (420)
T ss_pred ccccccccCCcHHHHHHHHHHh---cCCCCcccCCCC----CCCC-cHHHHHHHHHHhccchhccccccCCchHHHHHHH
Confidence 3445555555443333332221 12334 999998 5554 8999999999987765699999999999999999
Q ss_pred HHHhcCCCCcccc-CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeee------cC
Q 012628 137 ELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY------DP 209 (459)
Q Consensus 137 ~~l~~~~~~~~~~-~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~------~~ 209 (459)
+.+...+|..+.+ ++|++ |.|+.+++..+ ++..+++||+|+|.+|.|..|...++.+|++++.+|.. ..
T Consensus 80 k~~se~~~~~~~~~~eVlV--T~GA~~ai~~~--~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s 155 (420)
T KOG0257|consen 80 KAYSEFYGGLLDPDDEVLV--TAGANEAISSA--LLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSS 155 (420)
T ss_pred HHHHHHhccccCCcccEEE--ecCchHHHHHH--HHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccC
Confidence 9988766665555 56999 99999999987 67779999999999999999999999999999999986 45
Q ss_pred CCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH
Q 012628 210 KTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (459)
Q Consensus 210 ~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~ 289 (459)
.+|.+|++.++.++++ +|++|++|+||||||.++|+++|++|+++|++||+++|+||+|..+.+++ .++..+..+
T Consensus 156 ~~~~~D~~~le~~~t~---kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~--~~h~r~asl 230 (420)
T KOG0257|consen 156 SDWTLDPEELESKITE---KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDG--NKHIRIASL 230 (420)
T ss_pred ccccCChHHHHhhccC---CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCC--CcceeeecC
Confidence 6899999999999997 89999999999999999999999999999999999999999999999875 224455555
Q ss_pred HhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHH--HHHH
Q 012628 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFD--EWKA 367 (459)
Q Consensus 290 ~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~~~~ 367 (459)
-+..++++.++||||+||++|||+||+++ ++. +.+.+..+++.....+++..|.+.+..+..+.-.. .-..
T Consensus 231 Pgm~ertitvgS~gKtf~~TGWrlGW~ig---p~~----L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y 303 (420)
T KOG0257|consen 231 PGMYERTITVGSFGKTFGVTGWRLGWAIG---PKH----LYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSY 303 (420)
T ss_pred CchhheEEEeccccceeeeeeeeeeeeec---hHH----hhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchh
Confidence 55667999999999999999999999966 877 66666666666666777777777766554332100 0002
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCC-----------------HHHHHHHHhcccEEEcC
Q 012628 368 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------------KAQSDNMTNKWHVYMTK 430 (459)
Q Consensus 368 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~-----------------~~~~~~ll~~~gI~v~~ 430 (459)
.+.++.+.|+++|+.|.+.|. ++| +++..|+|++|+|++.+ ..++..++++.|+.+.|
T Consensus 304 ~~~~~~~~y~~krdil~k~L~-~lg----~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP 378 (420)
T KOG0257|consen 304 FITELVKEYKEKRDILAKALE-ELG----LKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIP 378 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcC----CccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeC
Confidence 246689999999999999999 998 68999999999998653 23467899999999988
Q ss_pred CC---------------cEEEccCChhhHHHHHHHHH
Q 012628 431 DG---------------RISLAGLSLAKCEYLADAII 452 (459)
Q Consensus 431 gg---------------Ris~~~~~~e~i~~~~~~l~ 452 (459)
+. |+++.. +++.++.+++.++
T Consensus 379 ~saF~s~~~~~~~~~~~r~~~~k-~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 379 PSAFGSREHIKVAERLVRFCFCK-ADETLRKAIERLK 414 (420)
T ss_pred chhcCCchhhHHHHHHHHHHHHh-hHHHHHHHHHHHh
Confidence 72 778877 7888888888887
No 10
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.6e-49 Score=395.69 Aligned_cols=342 Identities=14% Similarity=0.122 Sum_probs=271.8
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (459)
+.++|+|+.|++ ..++ ++.+.+++.+.+......+|++..|.++||+++|+++...+|..++++ +|++ |+|+
T Consensus 29 ~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~Gs 101 (388)
T PRK07366 29 GKELIDLSLGSS----DLPA-PAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLP--LIGS 101 (388)
T ss_pred CCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEE--CCCc
Confidence 457999999987 4444 788899988877544347799999999999999999988888888898 6999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++. ...+.+||+|++++|+|..|...++..|++++.+|+++++++.+|++.+++.+.+ +++++++|+|||
T Consensus 102 ~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~~p~N 176 (388)
T PRK07366 102 QEGTAHLP--LAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA---QARLMVLSYPHN 176 (388)
T ss_pred HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc---cceEEEEeCCCC
Confidence 99999983 3346799999999999999999999999999999997555678899999887764 577888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||++||+||+|.++.+++.. ...++..+.....++++++||||.||+||+|+||+++
T Consensus 177 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-- 253 (388)
T PRK07366 177 PTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV-EPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-- 253 (388)
T ss_pred CCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC-CCCChhhCCCCcccEEEEeecccccCCcchhheehcC--
Confidence 9999999999999999999999999999999999875311 1223333222335789999999999999999999965
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
++++++.+.+.. .....+.+...+.++...|.+. .+++++.++.++++++.+.+.|+ ++| +.+.
T Consensus 254 -~~~li~~l~~~~----~~~~~~~~~~~~~~a~~~l~~~------~~~l~~~~~~~~~~r~~l~~~L~-~~~----~~~~ 317 (388)
T PRK07366 254 -NAQLIQALRQVK----AVVDFNQYRGILNGAIAALTGP------QATVQQTVQIFRQRRDAFINALH-QIG----WPVP 317 (388)
T ss_pred -CHHHHHHHHHHH----hhcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----Cccc
Confidence 888555544432 2222233333333343344321 24578899999999999999999 876 5677
Q ss_pred cCCcceeeecCCC-------HHHHHHHHhcccEEEcCC--------C--cEEEccCChhhHHHHHHHHHHHH
Q 012628 401 LRQIGMFSFTGLN-------KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 401 ~~~~g~f~~~~l~-------~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
.|++|+|+|+.+. .++++.+++++||.+.|| + ||+++. +++++++++++|.+++
T Consensus 318 ~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 318 LPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAFL 388 (388)
T ss_pred CCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhC
Confidence 8899999998652 345678877789999997 1 999987 8899999999998753
No 11
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3e-49 Score=402.82 Aligned_cols=361 Identities=17% Similarity=0.127 Sum_probs=282.2
Q ss_pred CCCceeecccccCC---------------CCC---------CccCcHHHHHHHHHHhhcC--CCCCCCCCcccHHHHHHH
Q 012628 82 DEKKLNLGVGAYRT---------------EEL---------QPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVT 135 (459)
Q Consensus 82 ~~~~i~l~~g~~~~---------------~~~---------~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~ai 135 (459)
..++|+|++|+|-+ ... ....|..+.+++.+++... ....|++..|.++||++|
T Consensus 45 ~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ai 124 (481)
T PTZ00377 45 FDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAV 124 (481)
T ss_pred cceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHH
Confidence 36899999999921 111 0012557777777665431 236799999999999999
Q ss_pred HHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCC
Q 012628 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGL 214 (459)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~ 214 (459)
|+++...+|..+++++|++ |+|+++++.++.. ..+ .+||+|++++|+|+.|...++.+|++++.+|++++++|++
T Consensus 125 a~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~~~--~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~ 200 (481)
T PTZ00377 125 AAFIERRDGVPKDPSDIFL--TDGASSGIKLLLQ--LLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSL 200 (481)
T ss_pred HHHHHHhcCCCCChhhEEE--cCCHHHHHHHHHH--HhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCC
Confidence 9999888888899999999 9999999999843 346 5999999999999999999999999999999976667899
Q ss_pred CHHHHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh
Q 012628 215 DFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (459)
Q Consensus 215 d~e~l~~~i~~~---~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~ 291 (459)
|++.+++++++. ..++++++++|||||||.++|.+++++|+++|++||++||+||+|.++.|++. ....++..+..
T Consensus 201 d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~-~~~~s~~~~~~ 279 (481)
T PTZ00377 201 DQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGE-KPFISFRKVLL 279 (481)
T ss_pred CHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCC-CCcccHHHHHH
Confidence 999999998741 12577777789999999999999999999999999999999999999987421 12223322211
Q ss_pred ----c---CCeEEEEEcCCcC-cccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChh---
Q 012628 292 ----R---GMELLVAQSYSKN-LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA--- 360 (459)
Q Consensus 292 ----~---~~~~i~~~S~SK~-~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~--- 360 (459)
. ..++++++||||. +++||||+||+++...++++++.+. ..+.. ..+++.++|.++..+|+++.
T Consensus 280 ~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~----~~~~~-~~~~~~~~Q~a~~~~l~~~~~~~ 354 (481)
T PTZ00377 280 ELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIY----KLASI-NLCSNVVGQLMTGLMCNPPREGD 354 (481)
T ss_pred hhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHH----HHhhe-ecCCChHHHHHHHHHhCCCCCCc
Confidence 1 1368999999997 6999999999953224777444443 33322 33678889999999987532
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCC-----------------HHHHHHHHh
Q 012628 361 -LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------------KAQSDNMTN 422 (459)
Q Consensus 361 -~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~-----------------~~~~~~ll~ 422 (459)
..+.|.+++++.++.|+++++.+.+.|+ +++ ++.+..|+||||+|+.+. .+++..+++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~rr~~l~~~L~-~~~---g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~ 430 (481)
T PTZ00377 355 ASYPLYKRERDAIFTSLKRRAELLTDELN-KIE---GVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLE 430 (481)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCC---CcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHH
Confidence 2334667777888889999999999999 772 278889999999996431 234668888
Q ss_pred cccEEEcCCC-----------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 423 KWHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 423 ~~gI~v~~gg-----------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
++||.++||. ||||+. +++++++++++|.+++++
T Consensus 431 ~~gV~v~pG~~F~~~~~~~~~Rls~~~-~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 431 STGIVVVPGSGFGQKPGTYHFRITILP-PEEQIEEMVKKIKEFHES 475 (481)
T ss_pred HcCEEEeCCcccCCCCCCCEEEEEECC-CHHHHHHHHHHHHHHHHH
Confidence 8899999972 999994 888999999999998865
No 12
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=5.9e-49 Score=403.88 Aligned_cols=375 Identities=18% Similarity=0.158 Sum_probs=289.4
Q ss_pred cCCCCCCCCCccchhHHHhh--hCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHH
Q 012628 59 FEGVTMAPPDPILGVSEAFK--ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTA 136 (459)
Q Consensus 59 ~~~~~~~~~~~i~~~~~~~~--~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia 136 (459)
++++...+.+.+..+...++ ...+.++|+|+.|+| +..++++ |+.+.+++.+.+.. ..+|++..|.++||++||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p-~~~~~~~-p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReaia 195 (517)
T PRK13355 120 SHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNP-APFGFRT-PDEVVYDMAQQLTD--TEGYSDSKGLFSARKAIM 195 (517)
T ss_pred hHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCC-CcCCCCC-CHHHHHHHHHHhhc--CCCCCCCcChHHHHHHHH
Confidence 44444444444433333332 123568999999998 4444443 78888888887753 367999999999999999
Q ss_pred HHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCH
Q 012628 137 ELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (459)
Q Consensus 137 ~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~ 216 (459)
+++...++..+++++|++ |+|++++++++. ...+.+||+|++++|+|+.|...++..|++++.++++++++|.+|+
T Consensus 196 ~~~~~~~~~~~~~~~I~i--t~G~~eal~~~~--~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~ 271 (517)
T PRK13355 196 QYAQLKGLPNVDVDDIYT--GNGVSELINLSM--SALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDI 271 (517)
T ss_pred HHHHhcCCCCCChhHEEE--eCcHHHHHHHHH--HHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCH
Confidence 998777666788999999 999999999984 4447899999999999999999999999999999987666789999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeE
Q 012628 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMEL 296 (459)
Q Consensus 217 e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (459)
+++++++++ ++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+. ....+
T Consensus 272 ~~l~~~~~~---~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~--~~~s~~~~~-~~~~v 345 (517)
T PRK13355 272 DDIRSKITS---RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGL--EHTSIASLA-PDLFC 345 (517)
T ss_pred HHHHHhcCc---CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC--CcccHHHhC-CCCeE
Confidence 999998875 788888999999999999999999999999999999999999999987641 223433332 22357
Q ss_pred EEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012628 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 376 (459)
Q Consensus 297 i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 376 (459)
++++||||.|+++|||+||+++ .++++..+.+...+.... ....+++.++|.++..+|.+.... .+++++.+ ++
T Consensus 346 i~~~S~SK~~~~~G~RiG~~i~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~~---~~~~~~~~-~~ 419 (517)
T PRK13355 346 VTFSGLSKSHMIAGYRIGWMIL-SGNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQSV---KDYLVPGG-RV 419 (517)
T ss_pred EEEecchhhccCcccceEEEEe-eCchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCccH---HHHHHHHH-HH
Confidence 7889999999999999999964 235554445555444332 222367788999998888754222 23344443 34
Q ss_pred HHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC---------CHHHHHHHHhcccEEEcCCC----------cEEEc
Q 012628 377 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---------NKAQSDNMTNKWHVYMTKDG----------RISLA 437 (459)
Q Consensus 377 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l---------~~~~~~~ll~~~gI~v~~gg----------Ris~~ 437 (459)
.++++++.+.|+ +++ ++++..|+|+||+|+.+ +.+++.++++++||.++||. ||||+
T Consensus 420 ~~~r~~l~~~L~-~~~---g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~ 495 (517)
T PRK13355 420 YEQRELVYNALN-AIP---GISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL 495 (517)
T ss_pred HHHHHHHHHHHh-cCC---CcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC
Confidence 456899999999 872 26889999999999754 23567788888899999972 99997
Q ss_pred cCChhhHHHHHHHHHHHHhhc
Q 012628 438 GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 438 ~~~~e~i~~~~~~l~~~~~~~ 458 (459)
. +++++++++++|.+++.+.
T Consensus 496 ~-~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 496 P-RLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred C-CHHHHHHHHHHHHHHHHHh
Confidence 5 8999999999999998753
No 13
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-49 Score=395.38 Aligned_cols=338 Identities=17% Similarity=0.176 Sum_probs=276.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCcccc-CceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~gg 160 (459)
++++++|+.|.| ..++ ++.+.+++.+.+.....+.|. ..|.++||++||+++...+|..+++ ++|++ |+|+
T Consensus 31 ~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~G~ 102 (399)
T PRK07681 31 GHKMIDLSIGNP----DMPP-ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLL--LMGS 102 (399)
T ss_pred CCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEE--CCCc
Confidence 468999999987 3333 778888888877543335564 5899999999999998888888888 89999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++. ...+.+||+|++++|+|+.|...++.+|++++++|+++++++.+|++++++++.+ +++++++++|||
T Consensus 103 ~~al~~~~--~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~v~l~~P~N 177 (399)
T PRK07681 103 QDGLVHLP--MVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIAD---KAKMMILNFPGN 177 (399)
T ss_pred HHHHHHHH--HHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc---cceEEEEeCCCC
Confidence 99999984 3447799999999999999999999999999999996555678999999998865 678888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+++
T Consensus 178 PTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-- 253 (399)
T PRK07681 178 PVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-- 253 (399)
T ss_pred CcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCCCcccEEEEeecccccCCccceeEEEec--
Confidence 999999999999999999999999999999999987532 1222222222335799999999999999999999965
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
++++++++.. .......+++.+.|.++..+|+++. +++++.++.++++++.+.+.|+ +.| +++.
T Consensus 254 -~~~l~~~~~~----~~~~~~~~~s~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~ 317 (399)
T PRK07681 254 -NEEIVRALTQ----FKSNTDYGVFLPIQKAACAALRNGA------AFCEKNRGIYQERRDTLVDGFR-TFG----WNVD 317 (399)
T ss_pred -CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHH-HCC----Cccc
Confidence 7885555443 3323333678889999999988752 3467788899999999999999 876 5777
Q ss_pred cCCcceeeecCC-----CHHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHH
Q 012628 401 LRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIID 453 (459)
Q Consensus 401 ~~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~ 453 (459)
.|++|+|+|+.+ +.++++++++++||.+.||. ||+++. +++++++++++|++
T Consensus 318 ~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~ 384 (399)
T PRK07681 318 KPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN 384 (399)
T ss_pred CCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 789999999865 24567888887899999862 999986 78999999999987
No 14
>PLN02187 rooty/superroot1
Probab=100.00 E-value=7.5e-49 Score=396.33 Aligned_cols=366 Identities=14% Similarity=0.120 Sum_probs=286.2
Q ss_pred ccchhHHHh----hhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCC
Q 012628 69 PILGVSEAF----KADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 144 (459)
Q Consensus 69 ~i~~~~~~~----~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~ 144 (459)
+|+.+...+ .....+++|+|+.|+| +....+..++.+.+++.+.+..+....|.+..|.++||+++|+++...++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~ 126 (462)
T PLN02187 48 TLRGVIYMLFDNCGKDVNKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLP 126 (462)
T ss_pred hHhhHHHHHHhhcccCCCCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcC
Confidence 455554433 3334568999999987 32221224688889888887655457899999999999999999988788
Q ss_pred CccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHH
Q 012628 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (459)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~ 224 (459)
..+++++|++ |+|+++++.++.. ..+.|||+|++++|+|+.|...++..|++++.+++.+++++++|++.++++++
T Consensus 127 ~~~~~~~I~i--t~G~~~al~~~~~--~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~ 202 (462)
T PLN02187 127 HKLTPEDIFL--TAGCNQGIEIVFE--SLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD 202 (462)
T ss_pred CCCCcccEEE--eCCHHHHHHHHHH--HhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC
Confidence 8889999999 9999999999843 34679999999999999999999999999999998655679999999999886
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCc
Q 012628 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (459)
Q Consensus 225 ~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 304 (459)
+ ++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+ ....++++++||||
T Consensus 203 ~---~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~--~~~s~~~~-~~~~~vi~l~SfSK 276 (462)
T PLN02187 203 E---NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN--PFVSMGKF-ASIVPVLTLAGISK 276 (462)
T ss_pred C---CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CceeHHHh-ccCCcEEEEecchh
Confidence 5 678888999999999999999999999999999999999999999987542 22234333 22346999999999
Q ss_pred CcccCCCCcceEEEEeCChhHHHHHHHHHHhhcccc--ccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 012628 305 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK 382 (459)
Q Consensus 305 ~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (459)
.|++||||+||+++ .+++..-.+.+.+....... ..+++.++|.++..+|++.. .+++++.++.++++++.
T Consensus 277 ~f~~pGlRiG~~v~--~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~-----~~~l~~~~~~l~~~r~~ 349 (462)
T PLN02187 277 GWVVPGWKIGWIAL--NDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD-----KNFFAKKNKILKHNVDL 349 (462)
T ss_pred hcCCccceeEEEEe--cCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHH
Confidence 99999999999953 33332111222232222222 22457889999988887521 24578889999999999
Q ss_pred HHHHHhhccCCCCCcc-cccCCcceeeecCC---------CH-HHHHHHHhcccEEEcCCC--------cEEEccCChhh
Q 012628 383 LFDSLSAKDKSGKDWS-FILRQIGMFSFTGL---------NK-AQSDNMTNKWHVYMTKDG--------RISLAGLSLAK 443 (459)
Q Consensus 383 l~~~L~~~~g~~~~~~-~~~~~~g~f~~~~l---------~~-~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~ 443 (459)
+.+.|+ +++. .. +..|++|+|+|+.+ +. +++.++++++||.+.||. ||+|+. ++++
T Consensus 350 l~~~L~-~~~~---~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~ 424 (462)
T PLN02187 350 VCDRLK-DIPC---VVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHM 424 (462)
T ss_pred HHHHHh-hCCC---CcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHH
Confidence 999999 7741 22 34688999999854 22 557788788899999982 999998 7899
Q ss_pred HHHHHHHHHHHHhh
Q 012628 444 CEYLADAIIDSYHN 457 (459)
Q Consensus 444 i~~~~~~l~~~~~~ 457 (459)
+++++++|.+++++
T Consensus 425 l~~al~rL~~~l~~ 438 (462)
T PLN02187 425 LEDALERLKGFCTR 438 (462)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999865
No 15
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1e-48 Score=393.74 Aligned_cols=356 Identities=13% Similarity=0.099 Sum_probs=281.8
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+.++++++.|+| +..++++ |+.+.+++.+.+......+|++..|.++||+++++++...+|..+++++|++ |+|++
T Consensus 31 g~~~~~~~~G~p-~~~~~~~-p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~i--t~G~~ 106 (433)
T PRK06855 31 GVKITWENIGDP-IAKGEKI-PDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIF--FNGLG 106 (433)
T ss_pred cccccccccCCC-cccCCCC-CHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEE--cCcHH
Confidence 457899999998 3323343 7888888888775444478999999999999999999888888899999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh-hhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~-~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
+++.++. ..+.+||.|++++|+|+.|.... ...|++++.+|+++++++++|+++++++++.. ++++++++++|||
T Consensus 107 ~al~~~~---~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~i~l~~P~N 182 (433)
T PRK06855 107 DAIAKIY---GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN-PSIAGILLINPDN 182 (433)
T ss_pred HHHHHHH---HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC-CCceEEEEECCCC
Confidence 9999873 34679999999999999987543 45688999999865567899999999999742 2567788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.++|.+++++|+++|++||++||+||+|.++.+++. ...++..+.. ..++++++||||.|++||||+||+++..
T Consensus 183 PTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii~p~ 259 (433)
T PRK06855 183 PTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK--KTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIEVYN 259 (433)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEEEeC
Confidence 999999999999999999999999999999999987531 2234434322 2357999999999999999999995410
Q ss_pred C-ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc
Q 012628 321 S-SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 399 (459)
Q Consensus 321 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 399 (459)
. ++..+..+.+.+...... ..+++.+.|.++..+|+++.+ .+++++.++.|+++++.+.+.|+ ++. + +.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Q~a~~~~l~~~~~----~~~~~~~~~~~~~r~~~~~~~L~-~~~--~-~~~ 330 (433)
T PRK06855 260 ADKDEVFKKYINSILNAKMI-EVCSTTLPQMAIPRIMSHPEY----KNYLKERNKRYEKRSNIAYEKLK-DVP--G-LKV 330 (433)
T ss_pred CchhhHHHHHHHHHHHhhcc-ccCCChHHHHHHHHhhcCCcH----HHHHHHHHHHHHHHHHHHHHHHh-cCC--C-eec
Confidence 0 112222333333332222 335778899999999987654 35678899999999999999998 762 1 677
Q ss_pred ccCCcceeeecCCC--------------------------------HHHHHHHHhcccEEEcCCC---------cEEEcc
Q 012628 400 ILRQIGMFSFTGLN--------------------------------KAQSDNMTNKWHVYMTKDG---------RISLAG 438 (459)
Q Consensus 400 ~~~~~g~f~~~~l~--------------------------------~~~~~~ll~~~gI~v~~gg---------Ris~~~ 438 (459)
..|+||||+|+.+. .+++..+++++||.+.||. ||||+.
T Consensus 331 ~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~ 410 (433)
T PRK06855 331 NRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE 410 (433)
T ss_pred cCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC
Confidence 88999999998663 2345677778899999982 999998
Q ss_pred CChhhHHHHHHHHHHHHhh
Q 012628 439 LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 439 ~~~e~i~~~~~~l~~~~~~ 457 (459)
.+++++++++++|.+++++
T Consensus 411 ~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 411 RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 7899999999999999875
No 16
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-48 Score=390.40 Aligned_cols=345 Identities=17% Similarity=0.166 Sum_probs=277.9
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCcccc-CceEEeecccch
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT 161 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt 161 (459)
.+.|+|+.|.| .....++.+.+++.+.+.......|++..|.++||++|++++...+|..+++ ++|++ |+|++
T Consensus 39 ~~~i~l~~g~~----~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~i--t~Ga~ 112 (405)
T PRK06207 39 GRPVDFSHGDV----DAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELII--TPGTQ 112 (405)
T ss_pred CCceecCCcCC----CCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE--eCCcH
Confidence 47899999998 2212367888888887755434679989999999999999998877887888 89999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeee---cCCCCCCCHHHHHHHHHcCCCCcEEEEeCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY---DPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p 238 (459)
+++.++ +...+.+||+|++++|+|+.|...++.+|++++.++++ .++++++|++.+++++++ +++++++++|
T Consensus 113 ~al~~~--~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~---~~k~v~l~~P 187 (405)
T PRK06207 113 GALFLA--VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA---GVRVFLFSNP 187 (405)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh---cCeEEEECCC
Confidence 999998 34447799999999999999999999999999999985 234689999999999876 6778888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
|||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++++++||||.|++||+|+||+++
T Consensus 188 ~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~ 265 (405)
T PRK06207 188 NNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT--SYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG 265 (405)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc
Confidence 99999999999999999999999999999999999987532 1222322222356899999999999999999999966
Q ss_pred EeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 012628 319 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 398 (459)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 398 (459)
+++.++++... ......+.+.+.|.++..+|+++. .++++..+.++++++.+.+.|+ +++ +++
T Consensus 266 ---~~~l~~~~~~~----~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~r~~l~~~L~-~~~---~~~ 328 (405)
T PRK06207 266 ---SPAIIDRMEKL----QAIVSLRAAGYSQAVLRTWFSEPD------GWMKDRIARHQAIRDDLLRVLR-GVE---GVF 328 (405)
T ss_pred ---CHHHHHHHHHH----HhHhccCCCHHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHh-cCC---Cce
Confidence 78855554433 223334667788999988887531 1245566677888999999998 762 167
Q ss_pred cccCCcceeeecCCC------HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 399 FILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 399 ~~~~~~g~f~~~~l~------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+..|++|+|+|+.+. .++++.+++++||.+.||. ||||+. +++++++++++|.+++++.
T Consensus 329 ~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 329 VRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred ecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 778999999998753 3456777767899999972 999998 8899999999999998765
No 17
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.5e-48 Score=389.99 Aligned_cols=352 Identities=16% Similarity=0.167 Sum_probs=284.7
Q ss_pred CCCceeecccccCCCC-CCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEE-LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+.++|+|+.|+| +.. .++ .++.+.+++.+.+..+....|++..|.+++|+++++++...++..+++++|++ |+|+
T Consensus 51 ~~~~i~l~~G~P-~~~~~~~-~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i--t~G~ 126 (430)
T PLN00145 51 PRPVLPLGHGDP-SAFPCFR-TAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL--TAGC 126 (430)
T ss_pred CCCeeeCCCCCC-CCCCCCC-CCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE--eCCH
Confidence 458999999998 221 133 37889999998886654468999999999999999999888888899999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
+++++++... .+.+||+|++++|+|+.|.......|++++.+++.++++|.+|++.+++.+++ +++++++++|||
T Consensus 127 ~~al~l~~~~--l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~P~N 201 (430)
T PLN00145 127 AQAIEIIMSV--LAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE---NTVAMVIINPNN 201 (430)
T ss_pred HHHHHHHHHH--hcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc---CceEEEEeCCCC
Confidence 9999998443 36799999999999999999999999999999986566789999999998875 788889999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+ ....++++++||||.|++||||+||+++ .
T Consensus 202 PtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~~pG~RlG~iv~-~ 277 (430)
T PLN00145 202 PCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK--PFVPMGVF-GEVAPVLTLGSISKRWVVPGWRLGWIAT-C 277 (430)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC--Cccchhhh-cccCcEEEEeccccccCCCCeeEEEEEE-e
Confidence 999999999999999999999999999999999987531 22233332 3356899999999999999999999954 2
Q ss_pred CChhHHHH--HHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 012628 321 SSSDLAAR--VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 398 (459)
Q Consensus 321 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 398 (459)
.++..++. +...+.... ....+++.+.|.++..+|.+.. .+++++.++.++++++.+.+.|+ +++ ++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~-~~~---g~~ 347 (430)
T PLN00145 278 DPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTK-----EEFFTKTLGLLKETADICYEKIK-EIK---CIT 347 (430)
T ss_pred cchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHHHHHHHHh-cCC---CCC
Confidence 34443322 233333332 2344678889999988887521 24478889999999999999999 762 145
Q ss_pred c-ccCCcceeeecCCC----------HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 399 F-ILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 399 ~-~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
+ ..|+|++|+|++++ .+++.++++++||.+.||. ||+|+. ++++++.++++|.+++.+
T Consensus 348 ~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~ 424 (430)
T PLN00145 348 CPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLR 424 (430)
T ss_pred CCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHH
Confidence 4 47999999998652 3567889988899999982 999996 889999999999999865
No 18
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-48 Score=390.50 Aligned_cols=363 Identities=15% Similarity=0.130 Sum_probs=284.8
Q ss_pred cchhHHHhhhCCCCCceeecccccCCC-CCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccc
Q 012628 70 ILGVSEAFKADTDEKKLNLGVGAYRTE-ELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK 148 (459)
Q Consensus 70 i~~~~~~~~~~~~~~~i~l~~g~~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~ 148 (459)
+....+.+.++.++++|+|++|+| |. ..+++ ++.+.+++.+.+......+|.|..|.++||+++++++...+|..++
T Consensus 19 ~~~~~~~~~~~~~~~~i~l~~G~p-~~~~~~~~-p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~ 96 (409)
T PLN00143 19 VKFLKENFNEDDHRLAISFGFGDP-SCFECFRT-TNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLS 96 (409)
T ss_pred HHHHHHhcccCCCCceeeCCCCCC-CCCCCCCC-CHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC
Confidence 334444455667789999999998 31 12454 8899999988886544467999999999999999999888888889
Q ss_pred cCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCC
Q 012628 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (459)
Q Consensus 149 ~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~ 228 (459)
+++|++ |+|+++++.++. ...+.+||.|++++|+|+.|...++..|++++.+++.+++++.+|++.+++++++
T Consensus 97 ~~~I~i--t~G~~~al~~~~--~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 169 (409)
T PLN00143 97 PDDVYL--TLGCKHAAEIII--KVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE--- 169 (409)
T ss_pred HhhEEE--ecChHHHHHHHH--HHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc---
Confidence 999999 999999999984 4446899999999999999999999999999999986556788999999988865
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCccc
Q 012628 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 308 (459)
++++++++|||||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++.. ....+++++++||||.|++
T Consensus 170 ~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~--~~~~~~~-~~~~~~vi~~~SfSK~f~~ 246 (409)
T PLN00143 170 NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK--PFVPMGL-FASIVPVITLGSISKRWMI 246 (409)
T ss_pred CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC--CCcchhh-hcccCcEEEEccchhhcCC
Confidence 677888899999999999999999999999999999999999999987531 1222322 2344589999999999999
Q ss_pred CCCCcceEEEEeC-ChhHHHH--HHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 309 YAERIGAMNVVCS-SSDLAAR--VKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 309 ~G~RiG~~~~v~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
||+|+||++ +. ++...+. +.+.+...... ...++.+.|.++..+|.+.. ...+++.++.++++++.+.+
T Consensus 247 pGlRvG~~v--~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~ 318 (409)
T PLN00143 247 PGWGLGWLV--TCDPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEKTT-----EDFFSKTINILRAALAFCYD 318 (409)
T ss_pred CccceEEEE--eeCchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcCh-----HHHHHHHHHHHHHHHHHHHH
Confidence 999999994 43 3333221 22333332222 22346788999888887521 12356778888888899999
Q ss_pred HHhhccCCCCCcc-cccCCcceeeecCCC----------HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHH
Q 012628 386 SLSAKDKSGKDWS-FILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEY 446 (459)
Q Consensus 386 ~L~~~~g~~~~~~-~~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~ 446 (459)
.|+ +++. .. ...|+||+|+|+.+. .+++.++++++||.+.||. ||+|+. +++++++
T Consensus 319 ~L~-~~~~---~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l~~ 393 (409)
T PLN00143 319 KLK-EIPC---IMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSLED 393 (409)
T ss_pred HHh-cCCC---CCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHHHH
Confidence 998 7642 22 246889999998763 2456678777899999973 999997 7899999
Q ss_pred HHHHHHHHHhh
Q 012628 447 LADAIIDSYHN 457 (459)
Q Consensus 447 ~~~~l~~~~~~ 457 (459)
++++|++++++
T Consensus 394 al~rl~~~l~~ 404 (409)
T PLN00143 394 GLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 19
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=9e-49 Score=390.29 Aligned_cols=340 Identities=15% Similarity=0.156 Sum_probs=273.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (459)
++++|+|+.|.| ..+. ++.+.+++.+.+.......|+|..|.++||+++|+++...+|..++++ +|++ |.|+
T Consensus 31 ~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~i--t~G~ 103 (389)
T PRK08068 31 GHDVINLGQGNP----DQPT-PEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAI--LFGG 103 (389)
T ss_pred CCCeEEecCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEE--cCCc
Confidence 357899999987 3433 677888888877654446898899999999999999987778878888 7999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++ +...+.+||+|++++|+|..|...++..|++++.+|+++++++.+|++++++.+.+ +++++++++|||
T Consensus 104 ~~~l~~~--~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~P~N 178 (389)
T PRK08068 104 KAGLVEL--PQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE---KAKLMYLNYPNN 178 (389)
T ss_pred HHHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc---cceEEEEECCCC
Confidence 9999987 44446799999999999999999999999999999996555788999999998865 678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.++|.+++++|+++|++||++||+||+|.++.+++. ...++....+..+++++++||||.||++|+|+||+++
T Consensus 179 PTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-- 254 (389)
T PRK08068 179 PTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ--KPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-- 254 (389)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC--CCcChhhCCCccCCEEEEecchhccCCccceeEeEec--
Confidence 999999999999999999999999999999999887531 1122212222345789999999999999999999965
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
++++++.+... ......+++...|.++..+|.+. .+++++.++.++++++.+.+.|+ ++| +.+.
T Consensus 255 -~~~l~~~l~~~----~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~r~~~~~~L~-~~g----~~~~ 318 (389)
T PRK08068 255 -NESVIEAINLL----QDHLFVSLFGAIQDAAIEALLSD------QSCVAELVARYESRRNAFISACR-EIG----WEVD 318 (389)
T ss_pred -CHHHHHHHHHH----HhhccCCCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----Cccc
Confidence 88855555433 22333455566777777666543 13467889999999999999999 887 6778
Q ss_pred cCCcceeeecCC----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHH
Q 012628 401 LRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 401 ~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
+++||+|+|+.+ + .++.+++++++||.+.||. ||+++. ++++++.++++|.++
T Consensus 319 ~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 386 (389)
T PRK08068 319 APKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGKL 386 (389)
T ss_pred CCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHHh
Confidence 889999999855 2 3567788777899998861 999986 778888888888753
No 20
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-48 Score=390.41 Aligned_cols=347 Identities=13% Similarity=0.128 Sum_probs=275.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (459)
++++++|+.|.| ..+. ++.+.+++.+........+|++..|.++||+++|+++...++..++++ +|++ |+|+
T Consensus 32 ~~~~~~l~~g~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~i--t~G~ 104 (403)
T PRK08636 32 GEDIIDFSMGNP----DGPT-PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVA--TMGS 104 (403)
T ss_pred CCCEEEcCCcCC----CCCC-CHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--CCCh
Confidence 467899999988 3332 566666666655433347899999999999999999988788888887 7999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHH----HHHHHcCCCCcEEEEeC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGM----IADIKAAPGGSFILLHG 236 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l----~~~i~~~~~~~~~ii~~ 236 (459)
++++.++. ...+.+||.|++++|+|+.|...++..|++++++|++.++++++|++.+ +++++...+++++++++
T Consensus 105 ~~al~~~~--~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~ 182 (403)
T PRK08636 105 KEGYVHLV--QAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVN 182 (403)
T ss_pred HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEe
Confidence 99999983 4446799999999999999999999999999999985345689998865 55555433578888999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceE
Q 012628 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (459)
Q Consensus 237 ~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 316 (459)
+||||||.++|.+++++|+++|++|+++||+||+|.++.+++. ..+++..+....+++++++||||.||+||+|+||+
T Consensus 183 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i 260 (403)
T PRK08636 183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFV 260 (403)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcCCCccccEEEEEecccccCCccceeeee
Confidence 9999999999999999999999999999999999999987531 22233332122356788999999999999999998
Q ss_pred EEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 012628 317 NVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 396 (459)
Q Consensus 317 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 396 (459)
++ ++++++.+.... .....+++.+.|.++..++++. .++++++++.++++++.+.+.|+ +.|
T Consensus 261 v~---~~~li~~~~~~~----~~~~~~~~~~~q~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~---- 322 (403)
T PRK08636 261 VG---NKKLVGALKKIK----SWLDYGMFTPIQVAATIALDGD------QSCVEEIRETYRKRRDVLIESFA-NAG---- 322 (403)
T ss_pred eC---CHHHHHHHHHHH----HHhcccCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----
Confidence 65 888555544332 2222355667777777666532 23478889999999999999999 776
Q ss_pred cccccCCcceeeecCCC--------HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 397 WSFILRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 397 ~~~~~~~~g~f~~~~l~--------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+.+..|++|+|+|+.+. .++++.+++++||.+.||. ||+|+. +++++++++++|+++++..
T Consensus 323 ~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 323 WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIE-NENRIRQAARNIKKFLKEL 401 (403)
T ss_pred CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 57778999999999763 3556787877899999972 999985 8999999999999998764
No 21
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=1.2e-48 Score=388.08 Aligned_cols=342 Identities=16% Similarity=0.147 Sum_probs=281.7
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccch
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (459)
+++|+|+.|+| ..++ ++.+.+++.+.+... ...|.+..|.+++|+++|+++...+|..++++ +|++ |+|++
T Consensus 20 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~ 91 (378)
T PRK07682 20 EGVISLGVGEP----DFVT-PWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIV--TVGAS 91 (378)
T ss_pred CCeEEeCCCCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 47899999998 3333 667788888776543 36798899999999999999988778877776 7999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
++++++ +...+.+||+|++++|+|+.|...++..|++++.++++.++++++|++.+++++.+ +++++++++||||
T Consensus 92 ~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~~~~p~NP 166 (378)
T PRK07682 92 QALDVA--MRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA---KTKAILLCSPNNP 166 (378)
T ss_pred HHHHHH--HHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc---ccEEEEEECCCCC
Confidence 999998 34447799999999999999999999999999999986455689999999998875 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++|++|++++|+||+|.++.+++ ...++..+.+..+++++++||||.|++||+|+||+++
T Consensus 167 tG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~--- 240 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE---AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA--- 240 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC---CCCChhhcccccCCEEEEecCcccccChhhhhhhhhc---
Confidence 9999999999999999999999999999999998763 1223333333346899999999999999999999966
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++.+... ......+++.++|.++..+|+++. .++++.++.++++++.+.+.|+ ++| +++..
T Consensus 241 ~~~~i~~l~~~----~~~~~~~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~~ 305 (378)
T PRK07682 241 PVYFSEAMLKI----HQYSMMCAPTMAQFAALEALRAGN------DDVIRMRDSYRKRRNFFVTSFN-EIG----LTCHV 305 (378)
T ss_pred CHHHHHHHHHH----HHhhccCCCHHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHH-HCC----CccCC
Confidence 88855555443 223334678889999988887652 2367889999999999999999 886 57788
Q ss_pred CCcceeeecCC-----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhhcC
Q 012628 402 RQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNVS 459 (459)
Q Consensus 402 ~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~~~ 459 (459)
|+||+|+|+.+ + .++++.+++++||.+.||. |||++. +++++++++++|++++++++
T Consensus 306 p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~ 378 (378)
T PRK07682 306 PGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENKK 378 (378)
T ss_pred CCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhcC
Confidence 99999999743 3 3556788777899999861 999998 88999999999999998763
No 22
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-48 Score=387.98 Aligned_cols=353 Identities=14% Similarity=0.157 Sum_probs=280.4
Q ss_pred CCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCC
Q 012628 66 PPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (459)
Q Consensus 66 ~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~ 145 (459)
....+.++....+. .+++++|+.|.| ..++ ++.+.+++.+.+... ...|++..|.++||+++++++...++.
T Consensus 14 ~~~~~~~~~~~~~~--~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~ 85 (384)
T PRK06348 14 EVNIMAEIATLAKK--FPDIIDLSLGDP----DLIT-DESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYDL 85 (384)
T ss_pred CccHHHHHHHHHHh--cCCcEEcCCCCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCC
Confidence 34445555544432 357899999988 4443 567766555544333 378999999999999999999888888
Q ss_pred ccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc
Q 012628 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (459)
Q Consensus 146 ~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~ 225 (459)
.+++++|++ |+|+++++.++ +...+.+||+|++++|+|..|...++.+|++++.+|+.+++++.+|++.+++.+++
T Consensus 86 ~~~~~~i~i--t~G~~~al~~~--~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 161 (384)
T PRK06348 86 SFKRNEIMA--TVGACHGMYLA--LQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS 161 (384)
T ss_pred CCChhhEEE--cCChHHHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc
Confidence 889999999 99999999998 34447799999999999999999999999999999986556788999999998865
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC
Q 012628 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (459)
Q Consensus 226 ~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (459)
+++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++ ...++..+....+++++++||||.
T Consensus 162 ---~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~ 235 (384)
T PRK06348 162 ---KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE---DFVPMATLAGMPERTITFGSFSKD 235 (384)
T ss_pred ---CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC---CccchhhcCCCcCcEEEEecchhc
Confidence 56777888999999999999999999999999999999999999998753 122333332224689999999999
Q ss_pred cccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
||+||+|+||+++ +++..+. +.........+++.++|.++..+|.+. .+++++.++.++++++.+.+
T Consensus 236 ~~l~GlRiG~~v~---~~~~~~~----~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~r~~~~~~ 302 (384)
T PRK06348 236 FAMTGWRIGYVIA---PDYIIET----AKIINEGICFSAPTISQRAAIYALKHR------DTIVPLIKEEFQKRLEYAYK 302 (384)
T ss_pred cCCccccceeeec---CHHHHHH----HHHHHHhccCCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999966 7774444 333333333467888999998888653 34467889999999999999
Q ss_pred HHhhccCCCCCcccccCCcceeeecCC-----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHH
Q 012628 386 SLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLAD 449 (459)
Q Consensus 386 ~L~~~~g~~~~~~~~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~ 449 (459)
.|+ +++ ++++..|+||||+|+.+ + .++++.+++++||.+.||. |||++. ++++++++++
T Consensus 303 ~L~-~~~---~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~ 377 (384)
T PRK06348 303 RIE-SIP---NLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFN 377 (384)
T ss_pred HHh-cCC---CceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHHHHHHHHH
Confidence 998 763 25778899999999754 2 3557778877899999872 999985 8899999999
Q ss_pred HHHHH
Q 012628 450 AIIDS 454 (459)
Q Consensus 450 ~l~~~ 454 (459)
+|++.
T Consensus 378 ~l~~~ 382 (384)
T PRK06348 378 RIEKM 382 (384)
T ss_pred HHHhh
Confidence 98764
No 23
>PLN02231 alanine transaminase
Probab=100.00 E-value=9.9e-48 Score=391.97 Aligned_cols=354 Identities=15% Similarity=0.135 Sum_probs=276.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc--C-CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
.+++|+|+.|.+ .+ |..+++...+.+.. + ....|++..|.++||++||+++...+|..+++++|++ |+
T Consensus 128 ~p~~i~~~~~~~----~f---p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~i--T~ 198 (534)
T PLN02231 128 HPSLLDKSETHG----LF---SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFL--TD 198 (534)
T ss_pred CCccCCCCCccc----cC---CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEE--eC
Confidence 468888886554 44 34555555555543 2 3467999999999999999999888899999999999 99
Q ss_pred cchhHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC---CCcEEEE
Q 012628 159 SGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILL 234 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~-~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~---~~~~~ii 234 (459)
|+++++.++..+ .+. +||.|+++.|+|+.|...++..|+++++++++++++|++|+++|++++++.. .++++++
T Consensus 199 Ga~~ai~~~~~~--l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 199 GASPAVHMMMQL--LIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CHHHHHHHHHHH--hccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 999999998433 354 7999999999999999999999999999999766678999999999987521 2567788
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh------cCCeEEEEEcCCcCc-c
Q 012628 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT------RGMELLVAQSYSKNL-G 307 (459)
Q Consensus 235 ~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~-~ 307 (459)
++|||||||.+++.+++++|+++|++||++||+||+|+++.|++. ....++..+.. ...++++++||||.+ |
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g 355 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYG 355 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCccccc
Confidence 899999999999999999999999999999999999999998521 12233433321 123689999999975 8
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGRIKNVRQKL 383 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~l 383 (459)
++|+|+||+++...+++..+.+.+. .. ...+++..+|.++..+++.+ ..++.|.++.+.+++.|+++++.+
T Consensus 356 ~pGlRiGy~~~~~~~~~l~~~l~k~----~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l 430 (534)
T PLN02231 356 ECGKRGGYMEVTGFTSDVREQIYKV----AS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTL 430 (534)
T ss_pred CCccceEEEEEecCCHHHHHHHHHH----Hh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999996533367755544432 22 23356778888888888753 223344555677889999999999
Q ss_pred HHHHhhccCCCCCcccccCCcceeeecCC--CH---------------HHHHHHHhcccEEEcCCC-----------cEE
Q 012628 384 FDSLSAKDKSGKDWSFILRQIGMFSFTGL--NK---------------AQSDNMTNKWHVYMTKDG-----------RIS 435 (459)
Q Consensus 384 ~~~L~~~~g~~~~~~~~~~~~g~f~~~~l--~~---------------~~~~~ll~~~gI~v~~gg-----------Ris 435 (459)
.+.|+ ++. ++.+..|+||||+|+++ .. .++.+|++++||.++||. |++
T Consensus 431 ~~~L~-~~~---gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit 506 (534)
T PLN02231 431 EDALN-SLE---GVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCT 506 (534)
T ss_pred HHHHh-cCC---CceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEE
Confidence 99999 872 27888999999999543 21 135678888899999972 899
Q ss_pred EccCChhhHHHHHHHHHHHHhh
Q 012628 436 LAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 436 ~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
|.. +++++++++++|.+++++
T Consensus 507 ~~~-~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 507 ILP-QEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred eCC-CHHHHHHHHHHHHHHHHH
Confidence 976 889999999999988765
No 24
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=7e-48 Score=385.64 Aligned_cols=349 Identities=17% Similarity=0.135 Sum_probs=282.0
Q ss_pred CCCCceeecccccCCCC-CCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 81 TDEKKLNLGVGAYRTEE-LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
.++++|+|++|+| +.. .++ +++.+.+++.+++......+|++..|.+++|+++++++...+|..+++++|++ |+|
T Consensus 29 ~~~~~i~l~~G~p-~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G 104 (409)
T PLN02656 29 NGKRVISLGMGDP-TAYSCFH-TTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFI--TSG 104 (409)
T ss_pred cCCeeeecCCCCC-CcCCCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEE--eCC
Confidence 4578999999998 211 133 38899999998886654478999999999999999999888888888999999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
+++++.++. ...+.+||+|++++|+|+.|....+..|++++.+|+.+++++.+|++.+++.+++ +++++++++||
T Consensus 105 ~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~P~ 179 (409)
T PLN02656 105 CTQAIDVAL--SMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ---NTVALVIINPG 179 (409)
T ss_pred hHHHHHHHH--HHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc---CceEEEEECCC
Confidence 999999984 3346899999999999999998889999999999986555788999999998875 67888889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (459)
||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+ +...++++++||||.|++||+|+||+++
T Consensus 180 NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f~~pGlRiG~~i~- 255 (409)
T PLN02656 180 NPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVF-GSIVPVLTLGSLSKRWIVPGWRLGWFVT- 255 (409)
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHh-cccCcEEEEcccchhccCcceeEEEEEE-
Confidence 9999999999999999999999999999999999987642 22233222 3446899999999999999999999954
Q ss_pred eC-------ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 320 CS-------SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 320 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
+ +++.++++ ...... +.+++.++|.++..+|++.. .+++++.++.++++++.+.+.|+ +++
T Consensus 256 -~~~~~~~~~~~~~~~~----~~~~~~-~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~~r~~~~~~L~-~~~ 323 (409)
T PLN02656 256 -TDPSGSFRDPKIVERI----KKYFDI-LGGPATFIQAAVPTILEQTD-----ESFFKKTINILKQSSDICCDRIK-EIP 323 (409)
T ss_pred -eCcccccccHHHHHHH----HHHHhh-hcCCCHHHHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHHHHHh-hCC
Confidence 2 23534443 332222 33678889999998887531 23467888999999999999999 764
Q ss_pred CCCCcc-cccCCcceeeecCCC---------H-HHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHH
Q 012628 393 SGKDWS-FILRQIGMFSFTGLN---------K-AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIID 453 (459)
Q Consensus 393 ~~~~~~-~~~~~~g~f~~~~l~---------~-~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~ 453 (459)
. +. +..|+||+|+|+.++ . +++.++++++||.+.||. ||+|+. +++++++++++|++
T Consensus 324 ~---~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~eal~rl~~ 399 (409)
T PLN02656 324 C---ITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLEEALGRIKS 399 (409)
T ss_pred C---CcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHHHHHHHHHH
Confidence 1 22 357899999998652 2 456677777899999982 999997 89999999999999
Q ss_pred HHhhc
Q 012628 454 SYHNV 458 (459)
Q Consensus 454 ~~~~~ 458 (459)
++.+.
T Consensus 400 ~~~~~ 404 (409)
T PLN02656 400 FYLRH 404 (409)
T ss_pred HHHHh
Confidence 88753
No 25
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=5.5e-48 Score=385.51 Aligned_cols=357 Identities=17% Similarity=0.142 Sum_probs=281.3
Q ss_pred CCCCccchhHHHhh---hCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhc
Q 012628 65 APPDPILGVSEAFK---ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFG 141 (459)
Q Consensus 65 ~~~~~i~~~~~~~~---~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~ 141 (459)
.+++.+..+...++ ...+.++|+|+.|+| .+++ ++.+.+++.+.+.. ...|++..|.++||+++|+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~ 80 (396)
T PRK09147 8 LQPYPFEKLRALFAGVTPPADLPPISLSIGEP----KHPT-PAFIKDALAANLDG--LASYPTTAGLPALREAIAAWLER 80 (396)
T ss_pred CCcchHHHHHHHHHhhhhccCCCeEecCCCCC----CCCC-CHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHHHH
Confidence 34444544444443 234578999999998 4443 78888888877642 47899999999999999999988
Q ss_pred CCCCc-cccC-ceEEeecccchhHHHHHHHHHHHhCC---CCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCH
Q 012628 142 ADNSV-LKEQ-RVATVQGLSGTGSLRLAAALIERYFP---GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (459)
Q Consensus 142 ~~~~~-~~~~-~i~~~~t~ggt~a~~l~~~~~~~~~~---gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~ 216 (459)
.+|.. ++++ +|++ |+|+++++.++. ...+.+ ||.|++++|+|..|...++..|++++++|++++++|++|+
T Consensus 81 ~~g~~~~~~~~~i~i--t~G~~~al~~~~--~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~ 156 (396)
T PRK09147 81 RYGLPALDPATQVLP--VNGSREALFAFA--QTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDF 156 (396)
T ss_pred HhCCCcCCccceEEE--CCChHHHHHHHH--HHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCH
Confidence 77887 8885 8999 999999999983 344678 8999999999999999999999999999997556789999
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH--H--hc
Q 012628 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--A--TR 292 (459)
Q Consensus 217 e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~--~--~~ 292 (459)
+.+++.+.+ +++++++||||||||.++|.+++++|+++|++|+++||+||+|.++.+++.......+... . +.
T Consensus 157 ~~l~~~~~~---~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (396)
T PRK09147 157 DAVPAEVWA---RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDD 233 (396)
T ss_pred HHHHHHHhh---ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccc
Confidence 999988865 6788888999999999999999999999999999999999999999875311111111111 1 12
Q ss_pred CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q 012628 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 372 (459)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 372 (459)
.+++++++||||.|+++|+|+||+++ ++++++.+... ......+++.+.|.++...+.+. +++++.
T Consensus 234 ~~~vi~~~S~SK~~~~~GlRiG~~~~---~~~l~~~~~~~----~~~~~~~~~~~~q~a~~~~~~~~-------~~~~~~ 299 (396)
T PRK09147 234 FKRLVVFHSLSKRSNVPGLRSGFVAG---DAALLKKFLLY----RTYHGCAMPPAVQAASIAAWNDE-------AHVREN 299 (396)
T ss_pred cccEEEEeccccccCCccceeeeecC---CHHHHHHHHHH----hhhcccCCCHHHHHHHHHHhcch-------hHHHHH
Confidence 36899999999999999999999865 77755554432 22223366777888876666543 346888
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCC---HHHHHHHHhcccEEEcCC--------------C--c
Q 012628 373 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD--------------G--R 433 (459)
Q Consensus 373 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~g--------------g--R 433 (459)
++.++++++.+.+.|+ +. +.+..|++|+|+|+.+. .+++.++++++||.+.|| + |
T Consensus 300 ~~~~~~~~~~~~~~L~-~~-----~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iR 373 (396)
T PRK09147 300 RALYREKFDAVTPILA-PV-----LDVQLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVR 373 (396)
T ss_pred HHHHHHHHHHHHHHHH-Hh-----cCCCCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEE
Confidence 9999999999999998 64 35667899999999763 456778887789999875 1 9
Q ss_pred EEEccCChhhHHHHHHHHHHHHh
Q 012628 434 ISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 434 is~~~~~~e~i~~~~~~l~~~~~ 456 (459)
|+|+. +++++++++++|++++.
T Consensus 374 i~~~~-~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 374 IALVA-PLAECVEAAERIVDFCR 395 (396)
T ss_pred EEecC-CHHHHHHHHHHHHHHhc
Confidence 99998 78899999999998774
No 26
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=6.1e-48 Score=384.03 Aligned_cols=355 Identities=17% Similarity=0.213 Sum_probs=285.4
Q ss_pred CCCCccchhHHHhhh--CCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcC
Q 012628 65 APPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA 142 (459)
Q Consensus 65 ~~~~~i~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~ 142 (459)
..+.++.++...... ..++++++|+.|.| .+++ ++.+.+++.+.+.... ..|.+..|.+++|+++|+++...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~~-~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~ 85 (387)
T PRK08960 12 IEPFHVMALLARANELEAAGHDVIHLEIGEP----DFTT-AEPIVAAGQAALAAGH-TRYTAARGLPALREAIAGFYAQR 85 (387)
T ss_pred CCchHHHHHHHHHHHHHhcCCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHHHHHHHH
Confidence 345555555544321 12467899999998 4443 8889999998886443 67999999999999999999887
Q ss_pred CCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHH
Q 012628 143 DNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 222 (459)
Q Consensus 143 ~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~ 222 (459)
+|..+++++|++ |+|++++++++.. ..+.+||+|++++|+|+.+...++..|++++.+|++.+.++.+|++.+++.
T Consensus 86 ~g~~~~~~~i~i--t~G~~~al~~~~~--~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 161 (387)
T PRK08960 86 YGVDVDPERILV--TPGGSGALLLASS--LLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERH 161 (387)
T ss_pred hCCCCChhhEEE--ccCcHHHHHHHHH--HhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHH
Confidence 788888999999 9999999999843 346799999999999999999999999999999986555678999999998
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcC
Q 012628 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (459)
Q Consensus 223 i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 302 (459)
+++ +++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ ...++ ....+++++++||
T Consensus 162 ~~~---~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~---~~~~~---~~~~~~vi~~~S~ 232 (387)
T PRK08960 162 WNA---DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV---DAASV---LEVDDDAFVLNSF 232 (387)
T ss_pred hCc---cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCh---hhccCCEEEEeec
Confidence 875 67788889999999999999999999999999999999999999988753 12222 2334689999999
Q ss_pred CcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 012628 303 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK 382 (459)
Q Consensus 303 SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (459)
||.||++|+|+||+++ +++.++.+ .........+++.+.|.++..+|.+. . .+++++.++.++++++.
T Consensus 233 SK~~g~~GlRiG~~~~---~~~~~~~~----~~~~~~~~~~~s~~~q~a~~~~l~~~-~----~~~l~~~~~~~~~~~~~ 300 (387)
T PRK08960 233 SKYFGMTGWRLGWLVA---PPAAVPEL----EKLAQNLYISASTPAQHAALACFEPE-T----LAILEARRAEFARRRDF 300 (387)
T ss_pred ccccCCcccEEEEEEc---CHHHHHHH----HHHHhhhccCCCHHHHHHHHHHhhcC-c----HHHHHHHHHHHHHHHHH
Confidence 9999999999999976 77744443 33333334467888999888887642 1 34578889999999999
Q ss_pred HHHHHhhccCCCCCccc-ccCCcceeeecCC-----C-HHHHHHHHhcccEEEcCC---------C--cEEEccCChhhH
Q 012628 383 LFDSLSAKDKSGKDWSF-ILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKD---------G--RISLAGLSLAKC 444 (459)
Q Consensus 383 l~~~L~~~~g~~~~~~~-~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~g---------g--Ris~~~~~~e~i 444 (459)
+.+.|+ ++| +.+ ..|.+|+|+|+.+ + .++++++++++||.+.|| + ||+++. +.+++
T Consensus 301 l~~~L~-~~~----~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l 374 (387)
T PRK08960 301 LLPALR-ELG----FGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRL 374 (387)
T ss_pred HHHHHH-hcC----CcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHH
Confidence 999999 876 343 4688999999865 2 345678887789999987 1 999997 78888
Q ss_pred HHHHHHHHHHHh
Q 012628 445 EYLADAIIDSYH 456 (459)
Q Consensus 445 ~~~~~~l~~~~~ 456 (459)
+.++++|.+++.
T Consensus 375 ~~al~~l~~~~~ 386 (387)
T PRK08960 375 QEAVERIARGLR 386 (387)
T ss_pred HHHHHHHHHHHh
Confidence 999998888764
No 27
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=6.7e-48 Score=383.48 Aligned_cols=340 Identities=18% Similarity=0.152 Sum_probs=274.6
Q ss_pred CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeeccc
Q 012628 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLS 159 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~g 159 (459)
.++++++|+.|.| ..++ ++.+.+++.+.+......+|++..|.++||+++++++...++..++++ +|++ |+|
T Consensus 27 ~~~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~--t~G 99 (383)
T TIGR03540 27 EGVDVISLGIGDP----DLPT-PKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLS--LIG 99 (383)
T ss_pred cCCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEE--CCC
Confidence 3568999999988 4443 788889888877543347899999999999999999987777777776 6888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
+++++.++. ...+.+||+|++++|+|+.|...++..|++++.+|+++++++.+|++++++++.+ +++++++++||
T Consensus 100 ~~~~l~~~~--~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~---~~~~v~i~~P~ 174 (383)
T TIGR03540 100 SKEGIAHIP--LAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK---KAKLMFINYPN 174 (383)
T ss_pred cHHHHHHHH--HHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc---cceEEEEeCCC
Confidence 999999984 3346799999999999999999999999999999996555678899999988865 67888889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (459)
||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+++
T Consensus 175 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~- 251 (383)
T TIGR03540 175 NPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY--KAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG- 251 (383)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC--CCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-
Confidence 9999999999999999999999999999999999887531 1222222211235789999999999999999999965
Q ss_pred eCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc
Q 012628 320 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 399 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 399 (459)
++++++.+... ......+++.+.|.++..+|++. .+++++.++.++++++.+.+.|+ +.| +.+
T Consensus 252 --~~~l~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~ 314 (383)
T TIGR03540 252 --NADLIAGLGKV----KTNVDSGVFQAIQYAAIAALNGP------QDVVKEIRKIYQRRRDLLLEALK-KIG----IDV 314 (383)
T ss_pred --CHHHHHHHHHH----HHhcccCCChHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHH-hCC----CEe
Confidence 78855554433 22233466777888888888764 23467888999999999999999 876 577
Q ss_pred ccCCcceeeecCCC-----HHHHHHHHhcccEEEcCC--------C--cEEEccCChhhHHHHHHHHHH
Q 012628 400 ILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIID 453 (459)
Q Consensus 400 ~~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~e~i~~~~~~l~~ 453 (459)
..+++|+|+|+.+. .++++++++++||.+.|| + ||+++. ++++++.++++|++
T Consensus 315 ~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 315 EKPKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK 382 (383)
T ss_pred cCCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence 88899999998652 456778887789999987 2 999986 78888888888764
No 28
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-48 Score=384.42 Aligned_cols=339 Identities=19% Similarity=0.154 Sum_probs=273.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (459)
++++++|+.|.| ..++ ++.+.+++.+.+.......|++..|.++||+++++++...+|..++++ +|++ |+|+
T Consensus 30 ~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~--t~G~ 102 (385)
T PRK09276 30 GVDVISLGIGDP----DLPT-PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVIS--LIGS 102 (385)
T ss_pred CCCEEEecCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccCc
Confidence 467999999987 3333 778899998877543347898899999999999999987778777787 5888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++.. ..+.+||+|++++|+|+.|...++..|++++.+|+++++++.+|++.+++.+.+ ++++++++||||
T Consensus 103 ~~~i~~~~~--~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~---~~~~v~l~~p~N 177 (385)
T PRK09276 103 KEGIAHIPL--AFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK---KAKLMFINYPNN 177 (385)
T ss_pred HHHHHHHHH--HhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc---cceEEEEeCCCC
Confidence 999999843 346799999999999999999999999999999996555677899999888765 678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+++
T Consensus 178 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~-- 253 (385)
T PRK09276 178 PTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGY--KPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG-- 253 (385)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCC--CCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC--
Confidence 999999999999999999999999999999999886531 1223322212235789999999999999999999965
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
+++.++.+... ......+++...|.++..+|.+. .+++++.+++++++++.+.+.|+ ++| +++.
T Consensus 254 -~~~l~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~----~~~~ 317 (385)
T PRK09276 254 -NADLIAGLGKV----KSNVDSGVFQAIQEAGIAALNGP------QEVVEELRKIYQERRDILVEGLR-KLG----LEVE 317 (385)
T ss_pred -CHHHHHHHHHH----HhhccCCCCHHHHHHHHHHHcCc------HHHHHHHHHHHHHHHHHHHHHHH-hCC----Cccc
Confidence 88855555442 22333356667888888888652 24467889999999999999999 876 5777
Q ss_pred cCCcceeeecCCC-----HHHHHHHHhcccEEEcCC--------C--cEEEccCChhhHHHHHHHHHH
Q 012628 401 LRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIID 453 (459)
Q Consensus 401 ~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~e~i~~~~~~l~~ 453 (459)
.+++|+|+|+.+. .++++++++++||.+.|| + ||+|+. +++++.+++++|.+
T Consensus 318 ~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 318 PPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK 384 (385)
T ss_pred CCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence 8899999998652 355778887789999997 2 999986 78888888888764
No 29
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.1e-48 Score=383.64 Aligned_cols=342 Identities=15% Similarity=0.126 Sum_probs=276.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCc-cccC-ceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-LKEQ-RVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~-~~~~-~i~~~~t~g 159 (459)
+.++|+|+.|+| ...+ ++.+.+++.+.+.......|+ ..|.++||+++|+++...+|.. ++++ +|++ |+|
T Consensus 43 ~~~~i~L~~g~p----~~~~-~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~i--t~G 114 (410)
T PRK06290 43 DMELIDMGVGEP----DEMA-DESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIH--SIG 114 (410)
T ss_pred CCCeEEcCCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEE--ccC
Confidence 446899999998 3333 677888887766433335685 4899999999999998877887 8886 7999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
+++++.++. ...+.+||.|++++|+|+.|...++..|++++.+|+++++++.+|++.+++++.+ +++++++++||
T Consensus 115 s~~al~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~nP~ 189 (410)
T PRK06290 115 SKPALAMLP--SCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE---KAKLLYLNYPN 189 (410)
T ss_pred HHHHHHHHH--HHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc---cceEEEEECCC
Confidence 999999983 3346799999999999999999999999999999997555688899999998865 67888889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (459)
||||.+++.+++++|+++|++||++||+||+|.++.+++. ..++..+....+++++++||||.||++|+|+||+++
T Consensus 190 NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~---~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~- 265 (410)
T PRK06290 190 NPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK---PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG- 265 (410)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC---CcChhcCCCccccEEEEeechhhcCCchhheEeEEe-
Confidence 9999999999999999999999999999999999987531 123222222335789999999999999999999966
Q ss_pred eCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc
Q 012628 320 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 399 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 399 (459)
+++.++.+ .........+++.++|.++..+|+++.+ +++.+++++++++.+.+.|+ ++| +.+
T Consensus 266 --~~~l~~~l----~~~~~~~~~~~~~~~q~aa~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L~-~~g----~~~ 327 (410)
T PRK06290 266 --NELIVKAF----ATVKDNNDSGQFIAIQKAGIYALDHPEI-------TEKIREKYSRRLDKLVKILN-EVG----FKA 327 (410)
T ss_pred --CHHHHHHH----HHHHhccccCCcHHHHHHHHHHhhCcHH-------HHHHHHHHHHHHHHHHHHHH-hCC----Cee
Confidence 88854444 3333334446667889999888887532 57788999999999999999 886 577
Q ss_pred ccCCcceeeecCCC------------HHHHHHHHhcccEEEcCCC------cEEEccC--ChhhHHHHHHHHHHHHhhc
Q 012628 400 ILRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKDG------RISLAGL--SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 400 ~~~~~g~f~~~~l~------------~~~~~~ll~~~gI~v~~gg------Ris~~~~--~~e~i~~~~~~l~~~~~~~ 458 (459)
.+|+||||+|+.+. .+++++|+++.+|.+.||+ ||+++.. ++|+.++++++|++.+..+
T Consensus 328 ~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 328 EMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred cCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 88999999997542 3567888888778888862 9999843 6789999999999988764
No 30
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.3e-47 Score=383.51 Aligned_cols=366 Identities=13% Similarity=0.169 Sum_probs=287.0
Q ss_pred CccchhHHHhhhCC--CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCC
Q 012628 68 DPILGVSEAFKADT--DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNS 145 (459)
Q Consensus 68 ~~i~~~~~~~~~~~--~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~ 145 (459)
+++..+.+.++.+. ++++++|+.|.|.++...+ .++.+.+++.+.+.......|.|..|.++||+++++++... +.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~ 91 (401)
T TIGR01264 14 NPIRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DG 91 (401)
T ss_pred hHHHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CC
Confidence 34555555554432 3578999999982222233 37889999988776543467999999999999999998764 55
Q ss_pred ccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc
Q 012628 146 VLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (459)
Q Consensus 146 ~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~ 225 (459)
.+++++|++ |+|+++++.++. ...+.+||+|++++|+|..|...++..|++++.++++.++++++|++.+++.+++
T Consensus 92 ~~~~~~i~~--t~G~~~al~~~~--~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~ 167 (401)
T TIGR01264 92 PIEADDVVL--CSGCSHAIEMCI--AALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE 167 (401)
T ss_pred CCCHHHEEE--CcChHHHHHHHH--HHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc
Confidence 678999999 999999999984 3346799999999999999999999999999999986555789999999998875
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC
Q 012628 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (459)
Q Consensus 226 ~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (459)
+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+. ...++++++||||.
T Consensus 168 ---~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~-~~~~vi~~~SfSK~ 241 (401)
T TIGR01264 168 ---KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA--TFEPLASLS-STVPILSCGGLAKR 241 (401)
T ss_pred ---CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc--ccccHHHcC-CCCcEEEEccCccc
Confidence 567888899999999999999999999999999999999999999987531 223333332 22358999999999
Q ss_pred cccCCCCcceEEEEeCC-hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSS-SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 384 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (459)
|+++|+|+||+++ ++ ......+.+.+...... ..+++.++|.++..+|.+. . .+++++.++.++++++.+.
T Consensus 242 ~~~~GlRiG~iv~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~-~----~~~l~~~~~~~~~~r~~l~ 313 (401)
T TIGR01264 242 WLVPGWRLGWIII--HDRRGILRDIRDGLVKLSQR-ILGPCTIVQGALPSILLRT-P----QEYFDGTLSVLESNAMLCY 313 (401)
T ss_pred CCCccceEEEEEe--cCcchhHHHHHHHHHHHhhc-cCCCCcHHHHHHHHHHHhC-c----HHHHHHHHHHHHHHHHHHH
Confidence 9999999999965 32 12233344444443322 3366788999998888652 1 2457888999999999999
Q ss_pred HHHhhccCCCCCcccccCCcceeeecCCC----------HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHH
Q 012628 385 DSLSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEY 446 (459)
Q Consensus 385 ~~L~~~~g~~~~~~~~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~ 446 (459)
+.|+ +++ + +.+..|++|+|+|+.++ .++++++++++||.+.||+ ||+++. +++++++
T Consensus 314 ~~L~-~~~--~-~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~~ 388 (401)
T TIGR01264 314 GALA-AVP--G-LRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMMEE 388 (401)
T ss_pred HHHH-hCC--C-CcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHHH
Confidence 9999 772 2 67778999999999742 3557788877899999873 999997 7899999
Q ss_pred HHHHHHHHHhhc
Q 012628 447 LADAIIDSYHNV 458 (459)
Q Consensus 447 ~~~~l~~~~~~~ 458 (459)
++++|.+.++++
T Consensus 389 ~l~rl~~~~~~~ 400 (401)
T TIGR01264 389 ACSRIQEFCERH 400 (401)
T ss_pred HHHHHHHHHhcc
Confidence 999999998764
No 31
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.2e-47 Score=383.39 Aligned_cols=344 Identities=16% Similarity=0.149 Sum_probs=272.8
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (459)
++++|+|+.|.| ..++ ++.+.+++.+.+......+|++..|.++||+++|+++...+|..++++ +|++ |+|+
T Consensus 29 ~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i--t~G~ 101 (405)
T PRK09148 29 GADIIDLGMGNP----DLPT-PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVA--TLGS 101 (405)
T ss_pred CCCeEEcCCCCC----CCCC-CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCCh
Confidence 467899999987 4443 678888888776543347899999999999999999987777777887 8999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++.. ..+.+||+|++++|+|+.|...++..|++++.+|++++..+ ++.+++.++...++++++++++|||
T Consensus 102 ~~al~~~~~--~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~---~~~l~~~~~~~~~~~~~v~l~~P~N 176 (405)
T PRK09148 102 KEGFANMAQ--AITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF---FPALERAVRHSIPKPIALIVNYPSN 176 (405)
T ss_pred HHHHHHHHH--HhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC---ccCHHHHHhhccccceEEEEeCCCC
Confidence 999999843 34679999999999999999999999999999998644434 3444555543224778888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++++++||||.||+||+|+||+++
T Consensus 177 PtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~--~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-- 252 (405)
T PRK09148 177 PTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGN--PPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-- 252 (405)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCC--CCCChhhCCCccCcEEEEeccccccCCcchheeeeeC--
Confidence 999999999999999999999999999999999987531 1222322212235688999999999999999999965
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
+++.++.+. ........+++.++|.++..+|+++ .+++++.++.++++++.+.+.|+ ++| +.+.
T Consensus 253 -~~~~i~~l~----~~~~~~~~~~~~~~q~~~~~~L~~~------~~~~~~~~~~~~~~r~~l~~~L~-~~~----~~~~ 316 (405)
T PRK09148 253 -NERLIAALT----RVKSYLDYGAFTPIQVAATAALNGP------QDCIAEMRELYKKRRDVLVESFG-RAG----WDIP 316 (405)
T ss_pred -CHHHHHHHH----HHHHHhccCCChHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HcC----CccC
Confidence 888554443 3333333366778899998888754 24478889999999999999999 876 5667
Q ss_pred cCCcceeeecCCC--------HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 401 LRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 401 ~~~~g~f~~~~l~--------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
.|++|+|+|+.+. .++++.+++++||.+.||. ||+++. +++++++++++|.++++++
T Consensus 317 ~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~-~~~~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 317 PPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVE-NEQRIRQAARNIKRFLSSA 391 (405)
T ss_pred CCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHH
Confidence 7899999998652 3556778877899999972 999985 8899999999999988753
No 32
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=8.6e-48 Score=382.25 Aligned_cols=336 Identities=15% Similarity=0.180 Sum_probs=273.7
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCcccc-CceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~gg 160 (459)
.+++|+|+.|.| ..++ ++.+.+++.+.+.... ..|+|..|.++||+++++++...+|..+++ ++|++ |+|+
T Consensus 28 ~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~i--t~g~ 99 (384)
T PRK12414 28 QHDALNLSQGAP----NFAP-DPALVEGVARAMRDGH-NQYAPMAGIAALREALAEKTERLYGARYDPASEVTV--IASA 99 (384)
T ss_pred hCCeEEcCCCCC----CCCC-CHHHHHHHHHHHHhCC-CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--ECCh
Confidence 357999999998 4443 7888898888775443 789999999999999999987777776665 68999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++ +...+.+||+|++++|+|..|...++.+|++++.+|++ ++++.+|++.+++.+++ +++++++++|||
T Consensus 100 ~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~---~~~~v~i~~p~N 173 (384)
T PRK12414 100 SEGLYAA--ISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLS-PEDFRVNWDEVAAAITP---RTRMIIVNTPHN 173 (384)
T ss_pred HHHHHHH--HHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecC-ccccccCHHHHHhhcCc---ccEEEEEcCCCC
Confidence 9999998 44447899999999999999999999999999999985 34678999999998875 678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+....+++++++||||.||+||+|+||+++
T Consensus 174 PTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~-- 249 (384)
T PRK12414 174 PSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA--RHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLA-- 249 (384)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC--CccCcccCcCccCcEEEEecccccccCccceEEEEec--
Confidence 999999999999999999999999999999999887542 1112222222245899999999999999999999976
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
++++++.+.+ .......+++.++|.++..+|.++.. ..+.++.|+++++.+.+.|+ +.| +.+.
T Consensus 250 -~~~l~~~l~~----~~~~~~~~~s~~~q~a~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~g----~~~~ 312 (384)
T PRK12414 250 -PAELMDEIRK----VHQFMVFSADTPMQHAFAEALAEPAS-------YLGLGAFYQRKRDLLARELA-GSR----FELL 312 (384)
T ss_pred -CHHHHHHHHH----HHhheecCCCcHHHHHHHHHhcCChH-------HHHHHHHHHHHHHHHHHHHH-hCC----Ceec
Confidence 7775554443 33223346788899999999987543 23567889999999999999 876 6778
Q ss_pred cCCcceeeecCC-------CHHHHHHHHhcccEEEcCCC------------cEEEccCChhhHHHHHHHHHH
Q 012628 401 LRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG------------RISLAGLSLAKCEYLADAIID 453 (459)
Q Consensus 401 ~~~~g~f~~~~l-------~~~~~~~ll~~~gI~v~~gg------------Ris~~~~~~e~i~~~~~~l~~ 453 (459)
+++||||+|+.+ +.+++.++++++||.+.||. ||+++. +++++++++++|.+
T Consensus 313 ~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 313 PSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred CCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 899999999743 34667778877899999961 999998 88999999999865
No 33
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-47 Score=382.59 Aligned_cols=344 Identities=19% Similarity=0.191 Sum_probs=283.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
++++++|+.|.| ..++ ++.+.+++.+.+.... .+|.+..|.++||+++++++...+|..+++++|++ |+|++
T Consensus 32 ~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~--t~G~~ 103 (402)
T PRK06107 32 GRSIVDLTVGEP----DFDT-PDHIKQAAVAAIERGE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITV--GGGAK 103 (402)
T ss_pred cCCEEEcCCCCC----CCCC-CHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCCHH
Confidence 468999999998 3443 7888999988886543 68999999999999999999877788888999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
++++++ +...+.+||+|++++|+|..|...+...|++++.++++.++++.+|++.+++.+.+ +++++++++||||
T Consensus 104 ~al~~~--~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP 178 (402)
T PRK06107 104 QAIFLA--LMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP---RTRWLILNAPSNP 178 (402)
T ss_pred HHHHHH--HHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc---CceEEEEECCCCC
Confidence 999998 34447799999999999999999999999999888885455678999999998864 6777888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc-CCeeEEeccCCCCCCCCCCCChhHHHHHHh-cCCeEEEEEcCCcCcccCCCCcceEEEE
Q 012628 242 TGIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVV 319 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~-~~~ii~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (459)
||.+++.+++++|+++|++| ++++|+||+|.++.+.+. ..+++..+.. ..+++++++||||.|++||+|+||+++
T Consensus 179 tG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~- 255 (402)
T PRK06107 179 TGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE--PTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG- 255 (402)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC--CCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec-
Confidence 99999999999999999998 999999999999877532 2223333322 235899999999999999999999966
Q ss_pred eCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc
Q 012628 320 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 399 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 399 (459)
+++..+.+.. .......+++.+.|.++..+|++. ..++++.++.++++++.+.+.|+ +++ ++++
T Consensus 256 --~~~~~~~~~~----~~~~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~---g~~~ 319 (402)
T PRK06107 256 --PADLIAAINK----LQSQSSSCPSSISQAAAAAALNGD------QSFVTESVAVYKQRRDYALALLN-AIP---GLSC 319 (402)
T ss_pred --CHHHHHHHHH----HHHhcccCCChHHHHHHHHHhcCC------hHHHHHHHHHHHHHHHHHHHHHh-cCC---CCcc
Confidence 7885544443 333334478889999999998753 13468888999999999999999 762 1678
Q ss_pred ccCCcceeeecCC---------------C-HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHHH
Q 012628 400 ILRQIGMFSFTGL---------------N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 400 ~~~~~g~f~~~~l---------------~-~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
..|++|+|+|+.+ + .++++++++++||.+.||. ||+|+. ++|++++++++|.+.+
T Consensus 320 ~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~l~~~l 398 (402)
T PRK06107 320 LVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEEACARIERAV 398 (402)
T ss_pred cCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHH
Confidence 8899999999864 2 3557788888899999983 999997 8999999999999999
Q ss_pred hhc
Q 012628 456 HNV 458 (459)
Q Consensus 456 ~~~ 458 (459)
+++
T Consensus 399 ~~~ 401 (402)
T PRK06107 399 AAL 401 (402)
T ss_pred Hhc
Confidence 876
No 34
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.3e-47 Score=384.97 Aligned_cols=347 Identities=15% Similarity=0.179 Sum_probs=273.3
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhc-----------CCCCCCCCCcccHHHHHHHHHHHhcCCCC--ccccC
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-----------GENKEYLPIEGLAAFNKVTAELLFGADNS--VLKEQ 150 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~aia~~l~~~~~~--~~~~~ 150 (459)
++|+|+.+++ +...+.+.+.++...+. .....|++..|.++||++||+++...++. .++++
T Consensus 39 g~i~L~~~En------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~ 112 (468)
T PLN02450 39 GIIQMGLAEN------QLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN 112 (468)
T ss_pred eeEEeehhHh------HhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH
Confidence 6899999987 22245555555443210 12245888899999999999999876553 47899
Q ss_pred ceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-hCCCCeeeeeeecCCCCCCCHHHHHHHHHcC---
Q 012628 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKAA--- 226 (459)
Q Consensus 151 ~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~--- 226 (459)
+|++ |+|+++++.++ +...+.|||.|++++|+|+.|...+. ..|++++++|+++++++.+|++.+++++++.
T Consensus 113 ~Iii--t~Ga~~al~~l--~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~ 188 (468)
T PLN02450 113 KLVL--TAGATSANETL--MFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKL 188 (468)
T ss_pred HeEE--ccChHHHHHHH--HHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhc
Confidence 9999 99999999998 44446799999999999999988888 5899999999865567889999999988642
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh--------cCCeEEE
Q 012628 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT--------RGMELLV 298 (459)
Q Consensus 227 ~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~--------~~~~~i~ 298 (459)
..+++++++||||||||.+++.+++++|+++|++||++||+||+|.++.+++. +..++..... ..+++++
T Consensus 189 ~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~~~~~~vi~ 266 (468)
T PLN02450 189 NLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENTDVSNRVHI 266 (468)
T ss_pred CCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccCCCCCcEEE
Confidence 23677888899999999999999999999999999999999999999877532 2223222221 2468999
Q ss_pred EEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
++||||.|+++|+|+||+++ .++...+ .+.... .+..++.++|.++..+|+++.+.. .++++.++++++
T Consensus 267 l~S~SK~~~l~GlRiG~li~--~~~~l~~----~~~~~~--~~~~~s~~~Q~a~~~~L~~~~~~~---~~l~~~~~~l~~ 335 (468)
T PLN02450 267 VYSLSKDLGLPGFRVGAIYS--NDEMVVS----AATKMS--SFGLVSSQTQYLLSALLSDKKFTK---NYLEENQKRLKQ 335 (468)
T ss_pred EEeccccCCCCCccEEEEEE--CCHHHHH----HHHHHh--hcCCCCHHHHHHHHHHhCCchhHH---HHHHHHHHHHHH
Confidence 99999999999999999954 3344222 233222 123568889999999999876642 346788999999
Q ss_pred HHHHHHHHHhhccCCCCCcccccCCcceeeecCCC-----------HHHHHHHHhcccEEEcCCC----------cEEEc
Q 012628 379 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-----------KAQSDNMTNKWHVYMTKDG----------RISLA 437 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~-----------~~~~~~ll~~~gI~v~~gg----------Ris~~ 437 (459)
+++.+.+.|+ ++| +.+..+++|+|+|+.+. .++++++++++||.+.||. ||+|+
T Consensus 336 rr~~l~~~L~-~~g----i~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~ 410 (468)
T PLN02450 336 RQKKLVSGLE-AAG----IKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFA 410 (468)
T ss_pred HHHHHHHHHH-HcC----CcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEec
Confidence 9999999999 887 57788999999998763 2346677887899999982 99999
Q ss_pred cCChhhHHHHHHHHHHHHhhc
Q 012628 438 GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 438 ~~~~e~i~~~~~~l~~~~~~~ 458 (459)
..+++++++++++|++++.+.
T Consensus 411 ~~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 411 NMSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred CCCHHHHHHHHHHHHHHHHhc
Confidence 768899999999999988753
No 35
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=4.6e-47 Score=380.28 Aligned_cols=353 Identities=15% Similarity=0.154 Sum_probs=280.8
Q ss_pred CCCCceeecccccCCCC-CCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCC------CCccccCceE
Q 012628 81 TDEKKLNLGVGAYRTEE-LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD------NSVLKEQRVA 153 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~------~~~~~~~~i~ 153 (459)
.++++|+|+.|.| +.+ ... .++.+.+++.+.+......+|++..|.++||+++|+++...+ +..+++++|+
T Consensus 31 ~~~~~i~l~~g~p-~~~~~~~-p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~ 108 (412)
T PTZ00433 31 SPKSIIKLSVGDP-TLDGNLL-TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVV 108 (412)
T ss_pred CCCCeeecCCcCC-CCcCCCC-CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEE
Confidence 4578999999998 221 122 278899999887765434789988999999999999987543 4667899999
Q ss_pred EeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEE
Q 012628 154 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFIL 233 (459)
Q Consensus 154 ~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~i 233 (459)
+ |+|+++++.++. ...+.+||+|++++|+|..|...++..|++++.+|+++++++++|++++++.+++ +++++
T Consensus 109 i--t~G~~~al~~~~--~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~---~~~~i 181 (412)
T PTZ00433 109 L--CSGVSHAILMAL--TALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD---RTKAL 181 (412)
T ss_pred E--eCChHHHHHHHH--HHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc---CceEE
Confidence 9 999999999984 3346799999999999999999999999999999986556789999999988875 67788
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCc
Q 012628 234 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 313 (459)
Q Consensus 234 i~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri 313 (459)
+++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+ ....++++++||||.||+||+|+
T Consensus 182 ~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~SfSK~~~~pGlRl 258 (412)
T PTZ00433 182 IMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA--TFTSVADF-DTTVPRVILGGTAKNLVVPGWRL 258 (412)
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC--Cccchhhc-cCCCceEEEccchhhcCCCCeeE
Confidence 8999999999999999999999999999999999999999987531 22233333 22235899999999999999999
Q ss_pred ceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-C
Q 012628 314 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-K 392 (459)
Q Consensus 314 G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g 392 (459)
||+++ ..+....+.+.+.+...... ..+++.+.|.++..+|.+. . ..++++.++.++++++.+.+.|+ +. |
T Consensus 259 G~~i~-~~p~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~-~----~~~~~~~~~~~~~~r~~l~~~L~-~~~~ 330 (412)
T PTZ00433 259 GWLLL-VDPHGNGGDFLDGMKRLGML-VCGPCSVVQAALGEALLNT-P----QEHLEQIVAKLEEGAMVLYNHIG-ECIG 330 (412)
T ss_pred EEEEE-eCCcccHHHHHHHHHHHhhc-cCCCChHHHHHHHHHHhcC-c----HHHHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 99953 12221122244444443322 2367888999998888652 1 34578889999999999999998 75 4
Q ss_pred CCCCcccccCCcceeeecCCC----------HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHH
Q 012628 393 SGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 393 ~~~~~~~~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
+.+..|++|+|+|+.++ .++++.+++++||.+.||. ||+|+. .++++++++++|.++
T Consensus 331 ----~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~l~~al~~l~~~ 405 (412)
T PTZ00433 331 ----LSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEVLREAVERIKAF 405 (412)
T ss_pred ----CcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHH
Confidence 57788999999997542 3567888877899999973 999987 688999999999999
Q ss_pred Hhhc
Q 012628 455 YHNV 458 (459)
Q Consensus 455 ~~~~ 458 (459)
+++.
T Consensus 406 ~~~~ 409 (412)
T PTZ00433 406 CERH 409 (412)
T ss_pred HHHh
Confidence 8764
No 36
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-47 Score=378.95 Aligned_cols=340 Identities=17% Similarity=0.175 Sum_probs=269.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (459)
++++++|+.|.| ..++ ++.+.+++.+.+.......|++..|.++||+++++++...++..++++ +|++ |+|+
T Consensus 34 g~~~i~l~~g~p----~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~v--t~G~ 106 (394)
T PRK05942 34 GLDLIDLGMGNP----DGAA-PQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALP--LLGS 106 (394)
T ss_pred CCCeEEcCCCCC----CCCC-CHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEE--ccCh
Confidence 457899999987 3332 566777666655433347899999999999999999987777778887 4888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++. ...+.+||+|++++|+|+.+...++..|++++.+|++.++++.+|++.+++.+.+ ++++++++||||
T Consensus 107 ~~al~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~~P~N 181 (394)
T PRK05942 107 KEGLTHLA--LAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ---QAKILYFNYPSN 181 (394)
T ss_pred HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc---cceEEEEcCCCC
Confidence 99999983 4447899999999999999999899999999999996555688999999998875 788889899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+.+++++||||.||++|+|+||+++
T Consensus 182 PtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-- 257 (394)
T PRK05942 182 PTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY--QPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-- 257 (394)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCCChhhCCCccccEEEEecchhccCChhhheeeeec--
Confidence 999999999999999999999999999999999987532 1223322222234678999999999999999999966
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
+++.++.+.. .......+++.++|.++..+|+.. .+++++.+++++++++.+.+.|+ ++| +.+.
T Consensus 258 -~~~l~~~l~~----~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~ 321 (394)
T PRK05942 258 -NRHIIQGLRT----LKTNLDYGIFSALQKAAETALQLP------DSYLQQVQERYRTRRDFLIQGLG-ELG----WNIP 321 (394)
T ss_pred -CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HCC----Ceec
Confidence 7785555443 322223356778888888888643 34578889999999999999999 876 5777
Q ss_pred cCCcceeeecCC----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHH
Q 012628 401 LRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 401 ~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
.+++|+|+|+.+ + .+++.++++++||.+.||. ||+++. +.+.+.+++++|.++
T Consensus 322 ~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 322 PTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA 389 (394)
T ss_pred CCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 889999999865 2 3556778877899998861 999985 667777777777653
No 37
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=3.4e-47 Score=378.91 Aligned_cols=338 Identities=17% Similarity=0.232 Sum_probs=276.0
Q ss_pred CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
.++++++|+.|.| ..++ ++.+.+++.+.+... ...|++..|.++||+++|+++...+|..+++++|++ |+|+
T Consensus 28 ~~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G~ 99 (388)
T PRK07337 28 AGRDIIHMGIGEP----DFTA-PEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVV--TAGA 99 (388)
T ss_pred cCCCEEEeCCcCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEE--ecCc
Confidence 3568999999998 4443 678888888877644 367988899999999999999887888888999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
+++++++. ...+.+||+|++++|+|..+...++..|++++.+|+++++++++|++++++.+++ +++++++++|||
T Consensus 100 ~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~l~~p~N 174 (388)
T PRK07337 100 SAALLLAC--LALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE---RTRGVLLASPSN 174 (388)
T ss_pred HHHHHHHH--HHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc---cceEEEEECCCC
Confidence 99999984 3347799999999999999999999999999999996555789999999998875 678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|+++++++|+||+|.++.+.+. ..+. ....+++++++||||.||++|+|+||+++
T Consensus 175 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~---~~~~~~vi~~~S~SK~~~~~G~RiG~~~~-- 246 (388)
T PRK07337 175 PTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA---PVSA---LSLGDDVITINSFSKYFNMTGWRLGWLVV-- 246 (388)
T ss_pred CCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC---CcCh---hhccCCEEEEEechhhcCCchhheeeeec--
Confidence 999999999999999999999999999999999887531 1121 22346799999999999999999999966
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc-
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF- 399 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~- 399 (459)
+++.++.+.. .......+++.++|.++..++.+..+ +.+++.++.++++++.+.+.|+ ++| +.+
T Consensus 247 -~~~l~~~l~~----~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~r~~~~~~L~-~~~----~~~~ 311 (388)
T PRK07337 247 -PEALVGTFEK----LAQNLFICASALAQHAALACFEPDTL-----AIYERRRAEFKRRRDFIVPALE-SLG----FKVP 311 (388)
T ss_pred -CHHHHHHHHH----HHHHhccCCChHHHHHHHHHhccCch-----HHHHHHHHHHHHHHHHHHHHHH-hcC----Cccc
Confidence 7774444433 33233446788889998888865432 2246778999999999999999 776 343
Q ss_pred ccCCcceeeecCCC----------HHHHHHHHhcccEEEcCCC-----------cEEEccCChhhHHHHHHHHHHHH
Q 012628 400 ILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 400 ~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg-----------Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
..|++|+|+|+.+. .++++++++++||.+.||. ||+|+. +++++++++++|.+++
T Consensus 312 ~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 312 VMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred cCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 46789999998652 2456788887899998861 999998 7899999999998865
No 38
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-47 Score=376.24 Aligned_cols=343 Identities=18% Similarity=0.182 Sum_probs=280.9
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
+++|+|+.|+| ..++ ++.+.+++.+.+.+.. ..|++..|.+++|+++++++...+|..+++++|++ |+|+++
T Consensus 24 ~~~i~l~~g~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~--t~g~~~ 95 (382)
T PRK06108 24 EGVLPLWFGES----DLPT-PDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAV--TSSGVQ 95 (382)
T ss_pred CCeEEecCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEE--eCChHH
Confidence 57899999998 4544 7889999988876543 56999999999999999999877787788999999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecC-CCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~-~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
++.++. ...+.+||+|++++|+|..|...++..|++++.+|++.+ .++.+|++.+++.+++ +++++++++||||
T Consensus 96 al~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~i~l~~p~NP 170 (382)
T PRK06108 96 ALMLAA--QALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP---RTRALFINSPNNP 170 (382)
T ss_pred HHHHHH--HHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc---cceEEEEECCCCC
Confidence 999984 334679999999999999999999999999999998642 4577999999998865 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++|+++|+++|+||+|.++.++. .....++..+....+++++++||||.||++|+|+||+++
T Consensus 171 tG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~--- 246 (382)
T PRK06108 171 TGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVA--- 246 (382)
T ss_pred CCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeC---
Confidence 9999999999999999999999999999999998751 112222223333346899999999999999999999976
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++.+... ....+.+++.+.|.++..+|.+. .+++++.+++++++++.+.+.|+ +++ ++++..
T Consensus 247 ~~~~~~~~~~~----~~~~~~~~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~---~~~~~~ 312 (382)
T PRK06108 247 PPALGQVLEKL----IEYNTSCVAQFVQRAAVAALDEG------EDFVAELVARLRRSRDHLVDALR-ALP---GVEVAK 312 (382)
T ss_pred CHHHHHHHHHH----HHhcccCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hCC---CCcccC
Confidence 77755554432 22334567888899988888764 23467888999999999999998 762 267888
Q ss_pred CCcceeeecCCC-----HHHHHHHHhcccEEEcCC--------C--cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 402 RQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 402 ~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
|++|+|+|+.+. .+++++|++++||.+.|| + |||++. +++++++++++|++++++
T Consensus 313 p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~~ 382 (382)
T PRK06108 313 PDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLAR 382 (382)
T ss_pred CCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhC
Confidence 899999998652 356778888789999886 1 999998 999999999999998753
No 39
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.6e-46 Score=374.04 Aligned_cols=342 Identities=16% Similarity=0.178 Sum_probs=278.5
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCcccc-CceEEeecccch
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGT 161 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt 161 (459)
+++|+|+.|.| ...+ ++.+.+++.+.+.... ..|.+..|.++||+++++++...++..+++ ++|++ |+|++
T Consensus 30 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~i--t~G~~ 101 (391)
T PRK07309 30 PGILKLTLGEP----DFTT-PDHVKEAAKRAIDANQ-SHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILV--TIGAT 101 (391)
T ss_pred CCeEEcCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCChH
Confidence 57999999998 3333 6778888888775433 579999999999999999998877877764 78999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
++++++ +...+.+||+|++++|+|..|...++..|++++.+|.+ ++++.+|++.++++++..+++++++++++||||
T Consensus 102 ~al~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NP 178 (391)
T PRK07309 102 EALSAS--LTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPEMLEKAILEQGDKLKAVILNYPANP 178 (391)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHHHHHHHhhccCCCeEEEEEECCCCC
Confidence 999998 44447799999999999999999999999999999984 445789999999998754346788888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++|++||+++|+|++|.++.+++. ...++..+ ..+++++++||||.||++|+|+||+++
T Consensus 179 tG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRvG~~v~--- 251 (391)
T PRK07309 179 TGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE--PHVSIAEY--LPDQTILINGLSKSHAMTGWRIGLIFA--- 251 (391)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--CCCCHHHh--ccCCEEEEecChhhccCccceeEEEEe---
Confidence 99999999999999999999999999999999987431 22233222 236899999999999999999999976
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++.+.... .....+++.++|.++..+|++... .....+++++++++.+.+.|+ +.| +.+..
T Consensus 252 ~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~l~-~~~----~~~~~ 316 (391)
T PRK07309 252 PAEFTAQLIKSH----QYLVTAATTMAQFAAVEALTNGKD------DALPMKKEYIKRRDYIIEKMT-DLG----FKIIK 316 (391)
T ss_pred CHHHHHHHHHHH----hhcccCCChHHHHHHHHHHhCChh------HHHHHHHHHHHHHHHHHHHHH-HCC----CeecC
Confidence 888665554332 223336778889999888877532 134677888999999999999 876 57888
Q ss_pred CCcceeeecCCC-------HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 402 RQIGMFSFTGLN-------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 402 ~~~g~f~~~~l~-------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|++|+|+|+.+. .++++++++++||.+.||. ||+++. +.++++.++++|+++++++
T Consensus 317 p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 317 PDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred CCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 999999997542 3456677877899999872 999997 7899999999999998875
No 40
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-46 Score=375.10 Aligned_cols=344 Identities=18% Similarity=0.214 Sum_probs=277.7
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccc-cCceEEeecccch
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-EQRVATVQGLSGT 161 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~-~~~i~~~~t~ggt 161 (459)
+++++|+.|.| ..++ ++.+.+++.+.+.......|.+..|.+++|+++++++....|..++ +++|++ |+|++
T Consensus 27 ~~~~~l~~g~~----~~~~-~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~--t~G~~ 99 (389)
T PRK05957 27 PGTISLGQGVV----SYPP-PPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVV--TAGSN 99 (389)
T ss_pred CCeEEccCCCC----CCCC-CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE--eCChH
Confidence 57899999998 3443 7889999988775443467999999999999999999877777666 678999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++..+. ...+.+||+|++++|+|..+...++..|++++.+|. ++++++|++.+++++++ +++++++++||||
T Consensus 100 ~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~---~~klv~~~~p~NP 172 (389)
T PRK05957 100 MAFMNAI--LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPT--DDNYQLQPEAIEQAITP---KTRAIVTISPNNP 172 (389)
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeec--CCCCCcCHHHHHHhcCc---CceEEEEeCCCCC
Confidence 9998873 334679999999999999999989999999999998 45678999999999875 6788889999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++|++||+++|+||+|.++.+++. ...+...+.+...++++++||||.||++|+|+||+++
T Consensus 173 tG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~--- 247 (389)
T PRK05957 173 TGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV--KHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVI--- 247 (389)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC--CccChhhCCCccCcEEEEecchhhccCccceeEEEec---
Confidence 99999999999999999999999999999999987532 1112222234456899999999999999999999976
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++++.. .......+++.++|.++..+|+++. .++++.++.++++++.+.+.|+ +++ +.+.+.+
T Consensus 248 ~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~r~~l~~~L~-~~~--~~~~~~~ 314 (389)
T PRK05957 248 PIHLLEAIKK----IQDTILICPPVVSQYAALGALQVGK------SYCQQHLPEIAQVRQILLKSLG-QLQ--DRCTLHP 314 (389)
T ss_pred CHHHHHHHHH----HHhhcccCCCcHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHHHHH-hcC--CCccccC
Confidence 7775555443 3333344677889999888887642 2245666778999999999998 763 1135677
Q ss_pred CCcceeeecCC----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 402 RQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 402 ~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+++|+|+|+.+ + .++++++++++||.+.||. |||++..+++++++++++|.+.++++
T Consensus 315 ~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 315 ANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred CCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 89999999864 3 3667888877899999972 99998778899999999999988764
No 41
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.3e-46 Score=375.29 Aligned_cols=338 Identities=16% Similarity=0.120 Sum_probs=270.8
Q ss_pred CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCc--cccC-ceEEeec
Q 012628 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV--LKEQ-RVATVQG 157 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~--~~~~-~i~~~~t 157 (459)
.+.++++|+.|+| ..++ ++.+.+++.+.+.. ...|++..|.++||+++|+++...++.. ++++ +|++ |
T Consensus 26 ~~~~~i~l~~~~p----~~~~-~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~i--t 96 (393)
T TIGR03538 26 ASKPPIALSIGEP----KHPT-PAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLP--V 96 (393)
T ss_pred cCCCeEEecCCCC----CCCC-CHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEE--C
Confidence 3568999999998 4443 78899998887642 4789999999999999999998877765 6785 7999 9
Q ss_pred ccchhHHHHHHHHHHHhCCCCE--EEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEe
Q 012628 158 LSGTGSLRLAAALIERYFPGAK--VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 235 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~~gd~--Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~ 235 (459)
+|+++++.++. ...+.|||+ |++++|+|..|...++..|++++.+|+++++++.+|++.+++++.+ +++++++
T Consensus 97 ~Ga~~al~~~~--~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l 171 (393)
T TIGR03538 97 NGTREALFAFA--QAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR---RCQLLFV 171 (393)
T ss_pred CCcHHHHHHHH--HHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh---cceEEEE
Confidence 99999999984 334679986 9999999999999999999999999996555688999999998875 6778888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhH-HHHH--H--hcCCeEEEEEcCCcCcccCC
Q 012628 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS-VRLF--A--TRGMELLVAQSYSKNLGLYA 310 (459)
Q Consensus 236 ~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~-~~~~--~--~~~~~~i~~~S~SK~~~~~G 310 (459)
+|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ....+ ...+ . ...+++++++||||.|+++|
T Consensus 172 ~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G 250 (393)
T TIGR03538 172 CSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEG-NPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG 250 (393)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCC-CCCcCHHHhcccccccccccEEEEecchhhcCCcc
Confidence 99999999999999999999999999999999999999886521 01111 1111 1 12468999999999999999
Q ss_pred CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012628 311 ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 390 (459)
Q Consensus 311 ~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 390 (459)
+|+||+++ ++++++++... ......+++.+.|.++...+.+. +++++.++.++++++.+.+.|+ +
T Consensus 251 lRvG~~i~---~~~l~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~L~-~ 315 (393)
T TIGR03538 251 LRSGFVAG---DAEILKAFLRY----RTYHGCAMPIPTQLASIAAWNDE-------QHVRENRALYREKFAAVLEILG-Q 315 (393)
T ss_pred cceEEEec---CHHHHHHHHHH----HHhhccCcCHHHHHHHHHHhcCh-------HHHHHHHHHHHHHHHHHHHHHH-h
Confidence 99999865 77755554432 22222356778888877776543 3468889999999999999998 6
Q ss_pred cCCCCCcccccCCcceeeecCCC---HHHHHHHHhcccEEEcCC------------C----cEEEccCChhhHHHHHHHH
Q 012628 391 DKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD------------G----RISLAGLSLAKCEYLADAI 451 (459)
Q Consensus 391 ~g~~~~~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~g------------g----Ris~~~~~~e~i~~~~~~l 451 (459)
. +.+..|++|+|+|+.+. .++++.+++++||.+.|| | ||||+. +++++++++++|
T Consensus 316 ~-----~~~~~p~gg~f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l 389 (393)
T TIGR03538 316 V-----LDLELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERI 389 (393)
T ss_pred h-----CcccCCCeeEEEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHH
Confidence 5 24567899999999864 455778877789999765 1 999988 889999999999
Q ss_pred HHH
Q 012628 452 IDS 454 (459)
Q Consensus 452 ~~~ 454 (459)
+++
T Consensus 390 ~~~ 392 (393)
T TIGR03538 390 RSF 392 (393)
T ss_pred HHh
Confidence 875
No 42
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3.6e-47 Score=375.95 Aligned_cols=334 Identities=16% Similarity=0.134 Sum_probs=273.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+.++++|++|+| .++. ++.+ +++.+.+.... ..|++..|.++||++||+++.+ +++++|++ |+|++
T Consensus 25 ~~~~~~~~~~e~----~~~~-~~~~-~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~vi~--t~G~~ 90 (373)
T PRK07324 25 ESCIDSLTLEEL----LALA-GKNP-EAFYQELGQKK-LTYGWIEGSPEFKEAVASLYQN-----VKPENILQ--TNGAT 90 (373)
T ss_pred cCCCCCCcHHHH----Hhcc-Ccch-HHHHHHHhcCC-ccCCCCCCCHHHHHHHHHHhcC-----CChhhEEE--cCChH
Confidence 458999999998 3332 5566 77777776544 6899999999999999999753 34789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++ +...+.+||+|+++.|+|..|...++..|++++.+|+++++++.+|++.+++.+++ +++++++++||||
T Consensus 91 ~al~~~--~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~---~~kli~i~~p~NP 165 (373)
T PRK07324 91 GANFLV--LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRP---NTKLICINNANNP 165 (373)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCC---CCcEEEEeCCCCC
Confidence 999998 44447899999999999999999999999999999997556778999999988765 6788999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++++++++|+++|++||++||+||+|.++.+++ ...++ .+..+++++++||||.||++|+|+||+++
T Consensus 166 tG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s~---~~~~~~~I~~~s~SK~~~~~G~RiG~i~~--- 236 (373)
T PRK07324 166 TGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPSI---ADLYEKGISTNSMSKTYSLPGIRVGWIAA--- 236 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCCh---hhccCCEEEEecchhhcCCccceeEEEec---
Confidence 9999999999999999999999999999999988753 12222 23346789999999999999999999965
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.+++ +.+.+.....+++.+.|.++..+|++. .+.+++.++.++++++.+.+.|+ +.+ .+.+..
T Consensus 237 ~~~li~~----~~~~~~~~~~~~~~~~q~~a~~~l~~~------~~~l~~~~~~~~~~~~~l~~~l~-~~~---~~~~~~ 302 (373)
T PRK07324 237 NEEVIDI----LRKYRDYTMICAGVFDDMLASLALEHR------DAILERNRKIVRTNLAILDEWVA-KEP---RVSYVK 302 (373)
T ss_pred CHHHHHH----HHHHhCcEEecCChHHHHHHHHHHcCH------HHHHHHHHHHHHHHHHHHHHHHh-cCC---CceEEC
Confidence 7884444 444444444567788888888888753 34578889999999999999998 763 257788
Q ss_pred CCcceeeecCC-----CHHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 402 RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 402 ~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|++|+|.|+.+ +.++++++++++||.+.||. |||++. +++.+++++++|++++++.
T Consensus 303 p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 303 PKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred CCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 88888766543 24678888888899999983 999998 7899999999999998763
No 43
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.7e-46 Score=376.97 Aligned_cols=349 Identities=16% Similarity=0.214 Sum_probs=277.6
Q ss_pred CCC-CceeecccccCCCCCCccCcHHHHHHHHHHhh------c-----CCCCCCCCCcccHHHHHHHHHHHhcCCC--Cc
Q 012628 81 TDE-KKLNLGVGAYRTEELQPYVLDVVKKAENLMLE------R-----GENKEYLPIEGLAAFNKVTAELLFGADN--SV 146 (459)
Q Consensus 81 ~~~-~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~------~-----~~~~~Y~~~~g~~~lr~aia~~l~~~~~--~~ 146 (459)
.+| ++|+|+..++ ..+...+.+.+++..+ . .....|.+..|.++||+++|+++...++ ..
T Consensus 44 ~np~g~i~l~~aeN------~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~ 117 (447)
T PLN02607 44 HNPSGVIQMGLAEN------QVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKAR 117 (447)
T ss_pred cCCCceEEEechhh------hhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCC
Confidence 344 5999999986 2235666666655432 0 1124477889999999999999987666 36
Q ss_pred cccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-hCCCCeeeeeeecCCCCCCCHHHHHHHHHc
Q 012628 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (459)
Q Consensus 147 ~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~ 225 (459)
+++++|++ |+|++++++++. ...+.|||.|++++|+|+.|...+. ..|+++++|+++.+++|.+|++.+++++++
T Consensus 118 v~p~~Ivi--t~G~t~al~~l~--~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 118 FDPDRIVL--TAGATAANELLT--FILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred cCHHHeEE--cCChHHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence 88999999 999999999983 3346799999999999999988887 589999999986556788999999999874
Q ss_pred C---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc------CCeE
Q 012628 226 A---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR------GMEL 296 (459)
Q Consensus 226 ~---~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~------~~~~ 296 (459)
. ..++++++++|||||||.+++++++++|+++|++|++++|+||+|..+.+++ .+..++..+... .+++
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~--~~f~S~~s~~~~~~~~~~~~~v 271 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA--SEFVSVAEIVEARGYKGVAERV 271 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCcccHHHHHhhcCCCCCcCcE
Confidence 1 2367788889999999999999999999999999999999999999987753 223344443221 4589
Q ss_pred EEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012628 297 LVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 376 (459)
Q Consensus 297 i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 376 (459)
++++||||.||++|+|+||++ +.++++ ...+... ..+..++.++|.+++.+|+++++.+ +++++.++++
T Consensus 272 ~vi~s~SK~fg~~GlRvG~iv--s~n~~l----~~~~~~~--~~~~~~s~~~q~~~~~~L~d~~~~~---~~l~~~r~~l 340 (447)
T PLN02607 272 HIVYSLSKDLGLPGFRVGTIY--SYNDKV----VTTARRM--SSFTLVSSQTQHLLASMLSDEEFTE---NYIRTNRERL 340 (447)
T ss_pred EEEEcchhcCCCCcceEEEEE--EcCHHH----HHHHHHH--hhcCCCCHHHHHHHHHHhCCchhHH---HHHHHHHHHH
Confidence 999999999999999999994 445563 3333332 2233568889999999999987753 4578889999
Q ss_pred HHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCCH-----------HHHHHHHhcccEEEcCCC----------cEE
Q 012628 377 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK-----------AQSDNMTNKWHVYMTKDG----------RIS 435 (459)
Q Consensus 377 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~-----------~~~~~ll~~~gI~v~~gg----------Ris 435 (459)
+++++.+.+.|+ +.| +.+..+++|+|+|+++.. ++++++++++||.+.||. ||+
T Consensus 341 ~~~~~~~~~~L~-~~g----i~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~ 415 (447)
T PLN02607 341 RKRYEMIVQGLR-RAG----IECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVC 415 (447)
T ss_pred HHHHHHHHHHHH-hCC----CCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEE
Confidence 999999999999 887 577889999999997631 335678887899999982 999
Q ss_pred EccCChhhHHHHHHHHHHHHhh
Q 012628 436 LAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 436 ~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
|+..+++++++++++|.+++++
T Consensus 416 fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 416 FANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred eccCCHHHHHHHHHHHHHHHHH
Confidence 9977899999999999998864
No 44
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.6e-46 Score=381.16 Aligned_cols=350 Identities=15% Similarity=0.159 Sum_probs=271.5
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHh--h-----cCCCCCCCCCcccHHHHHHHHHHHhcCCC--CccccCceEE
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLML--E-----RGENKEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRVAT 154 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~-----~~~~~~Y~~~~g~~~lr~aia~~l~~~~~--~~~~~~~i~~ 154 (459)
++|+|+..++ ..-++.+.+.+.+.....+ . -.....|.+..|.++||++||+++...+| ..+++++|++
T Consensus 47 g~i~l~~aEN--~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivi 124 (496)
T PLN02376 47 GIIQMGLAEN--QLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVM 124 (496)
T ss_pred ceEEeecchh--hhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEE
Confidence 6999999875 1111222344443322211 0 01124588889999999999999987767 5688999999
Q ss_pred eecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-hCCCCeeeeeeecCCCCCCCHHHHHHHHHc---CCCCc
Q 012628 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGS 230 (459)
Q Consensus 155 ~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~ 230 (459)
|+|++++++++ +...+.|||.|++++|+|+.|...+. ..|++++++|++.++++++|++.+++++.. ...++
T Consensus 125 --t~Ga~~al~~l--~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~ 200 (496)
T PLN02376 125 --SGGATGANETI--MFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKV 200 (496)
T ss_pred --ccchHHHHHHH--HHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCe
Confidence 99999999998 44447899999999999999998887 589999999996556789999999877542 12367
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-------CCeEEEEEcCC
Q 012628 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-------GMELLVAQSYS 303 (459)
Q Consensus 231 ~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~S~S 303 (459)
++++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. +..++..+... .+++++++|||
T Consensus 201 k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~--~~~si~~l~~~~~~~~~~~~~v~vv~S~S 278 (496)
T PLN02376 201 KGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGG--DFVSVAEVVNDVDISEVNVDLIHIVYSLS 278 (496)
T ss_pred eEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC--CcccHHHhhccccccccCCCeEEEEEecc
Confidence 8888899999999999999999999999999999999999999887542 23444444321 13577899999
Q ss_pred cCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012628 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 383 (459)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (459)
|.||+||+|+||+++ .++. +.+.+.... .+..++.+.|.++..+|+++.+. ++++++.+++++++++.+
T Consensus 279 K~~glpGlRvG~li~--~~~~----l~~~~~~~~--~~~~vs~~~Q~a~~~~L~d~~~~---~~~l~~~r~~l~~r~~~l 347 (496)
T PLN02376 279 KDMGLPGFRVGIVYS--FNDS----VVSCARKMS--SFGLVSSQTQLMLASMLSDDQFV---DNFLMESSRRLGIRHKVF 347 (496)
T ss_pred ccCCCCcceEEEEEE--CCHH----HHHHHHHHh--hcCCCCHHHHHHHHHHhCChhHH---HHHHHHHHHHHHHHHHHH
Confidence 999999999999954 4444 333322222 22357889999999999987653 456788899999999999
Q ss_pred HHHHhhccCCCCCcccccCCcceeeecCCC------------HHHHHHHHhcccEEEcCCC----------cEEEccCCh
Q 012628 384 FDSLSAKDKSGKDWSFILRQIGMFSFTGLN------------KAQSDNMTNKWHVYMTKDG----------RISLAGLSL 441 (459)
Q Consensus 384 ~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~------------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~ 441 (459)
.+.|+ +.| +.+..+++|+|+|+++. .++++.+++++||.+.||. ||+|+..++
T Consensus 348 ~~~L~-~~g----i~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~ 422 (496)
T PLN02376 348 TTGIK-KAD----IACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDD 422 (496)
T ss_pred HHHHH-HCC----CcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCH
Confidence 99999 876 57888999999999762 2346677887899999972 999997688
Q ss_pred hhHHHHHHHHHHHHhh
Q 012628 442 AKCEYLADAIIDSYHN 457 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~ 457 (459)
++++.++++|++++.+
T Consensus 423 ~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 423 DTLHVALGRIQDFVSK 438 (496)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998853
No 45
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=1.1e-46 Score=374.72 Aligned_cols=353 Identities=16% Similarity=0.167 Sum_probs=284.9
Q ss_pred CCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCc
Q 012628 67 PDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV 146 (459)
Q Consensus 67 ~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~ 146 (459)
+..+.+....+. ..+++|+|+.|.| ..++ ++.+.+++.+.+... ...|++..|.++||+++++++...+|..
T Consensus 14 ~~~~~~~~~~~~--~~~~~i~l~~~~p----~~~~-~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~ 85 (387)
T PRK07683 14 ISGIRQFSNMVQ--NYDNLISLTIGQP----DFPT-PSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYDLH 85 (387)
T ss_pred ccHHHHHHHHHH--hcCCeEEecCCCC----CCCC-CHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 444444444443 2357899999987 3443 678899999888654 3789899999999999999998777887
Q ss_pred cccC-ceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc
Q 012628 147 LKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (459)
Q Consensus 147 ~~~~-~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~ 225 (459)
++++ +|++ |+|+++++.++. ...+.+||+|++++|+|..|...++..|++++++|.+ ++++.+|.+.+++.+++
T Consensus 86 ~~~~~~I~~--t~G~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~~ 160 (387)
T PRK07683 86 YSPESEIIV--TIGASEAIDIAF--RTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRLTAEALENAITE 160 (387)
T ss_pred CCCCCcEEE--eCChHHHHHHHH--HHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCCCHHHHHHhcCc
Confidence 8888 9999 999999999984 3346799999999999999999999999999999985 45677899999998875
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC
Q 012628 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (459)
Q Consensus 226 ~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (459)
+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++..+.+..+++++++||||.
T Consensus 161 ---~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~~~~vi~~~s~SK~ 234 (387)
T PRK07683 161 ---KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP---HTSIAHFPEMREKTIVINGLSKS 234 (387)
T ss_pred ---CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC---cCChhhccCCcCCeEEEeecccc
Confidence 677888899999999999999999999999999999999999999986531 22333332334689999999999
Q ss_pred cccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
||+||+|+||+++ +++.++++... ......+++.++|.++..+|.++. .++++.+++++++++.+.+
T Consensus 235 ~~~pGlRiG~i~~---~~~l~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~ 301 (387)
T PRK07683 235 HSMTGWRIGFLFA---PSYLAKHILKV----HQYNVTCASSISQYAALEALTAGK------DDAKMMRHQYKKRRDYVYN 301 (387)
T ss_pred ccCccceeEEEEc---CHHHHHHHHHH----HHhccCCCChHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999976 77755555443 223334567788999988887652 2367888999999999999
Q ss_pred HHhhccCCCCCcccccCCcceeeecCC-----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHH
Q 012628 386 SLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLAD 449 (459)
Q Consensus 386 ~L~~~~g~~~~~~~~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~ 449 (459)
.|. +.+ +.+..+++|+|+|+.+ + .+++.++++++||.+.||. ||+++. ++++++++++
T Consensus 302 ~l~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~ 375 (387)
T PRK07683 302 RLI-SMG----LDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLD 375 (387)
T ss_pred HHH-HcC----CcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHH
Confidence 999 776 5778899999999743 2 3556777888899999972 999998 8999999999
Q ss_pred HHHHHHhh
Q 012628 450 AIIDSYHN 457 (459)
Q Consensus 450 ~l~~~~~~ 457 (459)
+|.+++.+
T Consensus 376 ~l~~~l~~ 383 (387)
T PRK07683 376 RLEAFLQQ 383 (387)
T ss_pred HHHHHHHh
Confidence 99998865
No 46
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=9.1e-47 Score=375.75 Aligned_cols=340 Identities=18% Similarity=0.166 Sum_probs=272.5
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccch
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (459)
+++++|+.|.| ..+. ++.+.+++.+.+.... .+|++..|.++||+++++++...+|..++++ +|++ |+|++
T Consensus 26 ~~~i~l~~g~p----~~~~-p~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~--t~G~~ 97 (387)
T PRK08912 26 HGAINLGQGFP----DDPG-PEDVRRAAADALLDGS-NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMV--TSGAT 97 (387)
T ss_pred CCeEEccCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEE--eCCcH
Confidence 57899999998 3333 6677887777665443 7899999999999999999987778888888 9999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++ +...+.+||+|++++|+|..|...++..|++++.+|++ ++++++|++.+++.+.+ +++++++++||||
T Consensus 98 ~al~~~--~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP 171 (387)
T PRK08912 98 EALAAA--LLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLE-PPHWRLPRAALAAAFSP---RTKAVLLNNPLNP 171 (387)
T ss_pred HHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccCcCCHHHHHHHhCc---cceEEEEeCCCCC
Confidence 999887 44446799999999999999999999999999999984 34688999999998875 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+++
T Consensus 172 tG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~--- 246 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR--RHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCA--- 246 (387)
T ss_pred cCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC--CCcChhhCCCccCceEEEeechhhccCcCceeEEEec---
Confidence 99999999999999999999999999999999887531 1222222222236899999999999999999999966
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++.+... ......+.+...|.++...|... .+++++.+++++++++.+.+.|+ +.| +++.+
T Consensus 247 ~~~~~~~l~~~----~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~ 311 (387)
T PRK08912 247 APPLLRVLAKA----HQFLTFTTPPNLQAAVAYGLGKP------DDYFEGMRADLARSRDRLAAGLR-RIG----FPVLP 311 (387)
T ss_pred CHHHHHHHHHH----HhhccccCChHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHH-hCC----CcccC
Confidence 77755554432 22222244555677776666432 23357888999999999999999 876 57788
Q ss_pred CCcceeeecCCC-------H-HHHHHHHhcccEEEcCC----------C--cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 402 RQIGMFSFTGLN-------K-AQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 402 ~~~g~f~~~~l~-------~-~~~~~ll~~~gI~v~~g----------g--Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
+++|||+|+.+. . ++++.+++++||.+.|| + ||+|+. +++++++++++|.+++++
T Consensus 312 ~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 312 SQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR 386 (387)
T ss_pred CCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 899999997652 2 45777777789999986 1 999998 789999999999998764
No 47
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-46 Score=373.46 Aligned_cols=343 Identities=16% Similarity=0.160 Sum_probs=281.0
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
+++|+|+.|.| ..++ ++.+.+++.+.+.... ..|.|..|.++||+++|+++...+|..+++++|++ |+|+++
T Consensus 33 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~ 104 (391)
T PRK08361 33 ENVISLGIGEP----DFDT-PKNIKEAAKRALDEGW-THYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIV--TAGAYE 104 (391)
T ss_pred cCeEEcCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEE--eCChHH
Confidence 57899999998 4443 7888898888776543 67989999999999999998776777788999999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++. ...+.+||+|++++|+|..+...++..|++++.+|++++.++.+|++.+++.+++ +++++++++|||||
T Consensus 105 al~~~~--~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~v~i~~p~NPt 179 (391)
T PRK08361 105 ATYLAF--ESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK---RTRMIVINYPNNPT 179 (391)
T ss_pred HHHHHH--HHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc---ccEEEEEeCCCCCC
Confidence 999984 3346799999999999999999999999999999996555688999999999876 67788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|+++|+++++++|+||+|.++.+++. ...++..+ ..+++++++||||.||++|+|+||+++ +
T Consensus 180 G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~---~ 252 (391)
T PRK08361 180 GATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIA---P 252 (391)
T ss_pred CcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhcc---C
Confidence 9999999999999999999999999999999876431 12222221 235799999999999999999999966 7
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.++.+.. .......+++.+.|.++..+|+++.+. +++++.++.++++++.+.+.|+ +++ ++.+..+
T Consensus 253 ~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~L~-~~~---~~~~~~p 320 (391)
T PRK08361 253 EQVIKDMIK----LHAYIIGNVASFVQIAGIEALRSKESW----KAVEEMRKEYNERRKLVLKRLK-EMP---HIKVFEP 320 (391)
T ss_pred HHHHHHHHH----HHhhhccCCChHHHHHHHHHhcCCccc----HHHHHHHHHHHHHHHHHHHHHH-hCC---CCeecCC
Confidence 775554433 222233467788899998899876442 4578899999999999999999 762 2678889
Q ss_pred CcceeeecCC-----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 403 QIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 403 ~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
++|+|+|+.+ + .++++.+++++||.+.||. ||+++. ++++++.++++|+++++++
T Consensus 321 ~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~~ 391 (391)
T PRK08361 321 KGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEEL 391 (391)
T ss_pred CEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhcC
Confidence 9999999754 2 3556677777899999862 999997 7889999999999998764
No 48
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-46 Score=371.83 Aligned_cols=367 Identities=20% Similarity=0.223 Sum_probs=294.3
Q ss_pred ccCCCCCCCCCccchhHHHhhh--CCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHH
Q 012628 58 RFEGVTMAPPDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVT 135 (459)
Q Consensus 58 ~~~~~~~~~~~~i~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~ai 135 (459)
+++++...+++++.++.+.++. ...+.+++|+.|.| ..++ ++.+.+++.+.+.... ..|++..|.++||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~i 77 (393)
T PRK05764 4 LSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEP----DFDT-PEHIKEAAIEALDDGK-TKYTPAAGIPELREAI 77 (393)
T ss_pred hhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCC----CCCC-CHHHHHHHHHHHhcCC-CCcCCCCChHHHHHHH
Confidence 3556666667776555543331 22467999999998 4443 7889999888876543 5799999999999999
Q ss_pred HHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCC
Q 012628 136 AELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD 215 (459)
Q Consensus 136 a~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d 215 (459)
++++...++..+++++|++ |+|+++++.++ +...+.+||+|++++|+|..|...++.+|++++.+|+++++++.+|
T Consensus 78 a~~~~~~~~~~~~~~~i~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 153 (393)
T PRK05764 78 AAKLKRDNGLDYDPSQVIV--TTGAKQALYNA--FMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLT 153 (393)
T ss_pred HHHHHHHhCCCCCHHHEEE--eCCcHHHHHHH--HHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCC
Confidence 9999877777778999999 99999999987 3444779999999999999999999999999999999655578899
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH-HhcCC
Q 012628 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGM 294 (459)
Q Consensus 216 ~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~-~~~~~ 294 (459)
++.+++.+++ +++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+ .+..+
T Consensus 154 ~~~l~~~l~~---~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~ 228 (393)
T PRK05764 154 VEQLEAAITP---KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPELRD 228 (393)
T ss_pred HHHHHHhhCc---cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCCCcC
Confidence 9999999865 677888899999999999999999999999999999999999999886431 12233333 23346
Q ss_pred eEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 012628 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 374 (459)
Q Consensus 295 ~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 374 (459)
++++++||||.++++|+|+||+++ +++..+.+ .......+.+++.++|.++..+|++. .+++++.++
T Consensus 229 ~~i~~~s~SK~~~~~G~RiG~i~~---~~~~~~~~----~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~ 295 (393)
T PRK05764 229 RTITVNGFSKAYAMTGWRLGYAAG---PKELIKAM----SKLQSHSTSNPTSIAQYAAVAALNGP------QDEVEEMRQ 295 (393)
T ss_pred CEEEEecCcccccCccceeEEEec---CHHHHHHH----HHHHhhcccCCChHHHHHHHHHHcCC------hHHHHHHHH
Confidence 899999999999999999999965 78854444 33333445577888888888888631 234678888
Q ss_pred HHHHHHHHHHHHHhhcc-CCCCCcccccCCcceeeecCCC----------HHHHHHHHhcccEEEcCCC--------cEE
Q 012628 375 RIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RIS 435 (459)
Q Consensus 375 ~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--------Ris 435 (459)
.++++++.+.+.|+ ++ | +.+..++||+|+|+.+. .++.+.+++++||.+.||. |||
T Consensus 296 ~~~~~~~~l~~~L~-~~~g----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis 370 (393)
T PRK05764 296 AFEERRDLMVDGLN-EIPG----LECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS 370 (393)
T ss_pred HHHHHHHHHHHHHh-hCCC----CcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE
Confidence 99999999999999 87 4 67788999999997542 4556788887899999873 999
Q ss_pred EccCChhhHHHHHHHHHHHHhhc
Q 012628 436 LAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 436 ~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
++. +++++++++++|.++++++
T Consensus 371 ~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 371 YAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred ecC-CHHHHHHHHHHHHHHHHhh
Confidence 998 8999999999999998865
No 49
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=3e-46 Score=374.22 Aligned_cols=339 Identities=17% Similarity=0.153 Sum_probs=266.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC----CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
++++++|+.|+| ..++ ++.+.+++.+.+... ....|.+..|.++||+++|+++...+|..+++++|++ |
T Consensus 33 ~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~i--t 105 (409)
T PRK07590 33 EAKIIRLGIGDV----TQPL-PPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFI--S 105 (409)
T ss_pred CCceEEecCcCC----CCCC-CHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEE--C
Confidence 467999999998 4443 778888888877541 2368999999999999999998888888899999999 9
Q ss_pred ccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCC-----------eeeeeeecCCCCCCCHHHHHHHHHcC
Q 012628 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVP-----------WSEYRYYDPKTVGLDFEGMIADIKAA 226 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~-----------v~~v~~~~~~~~~~d~e~l~~~i~~~ 226 (459)
+|+++++.++ ...+.+||+|++++|+|..|...++..|++ ++++|+++++++.+|++.
T Consensus 106 ~Ga~~al~~l---~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~-------- 174 (409)
T PRK07590 106 DGAKCDTGNI---LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE-------- 174 (409)
T ss_pred CCHHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc--------
Confidence 9999999885 344679999999999999999999999987 899998544445555331
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc
Q 012628 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (459)
Q Consensus 227 ~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (459)
++++++++||||||||.++|.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++++++||||.|
T Consensus 175 -~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~ 251 (409)
T PRK07590 175 -EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS--LPHSIYEIEGARECAIEFRSFSKTA 251 (409)
T ss_pred -cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC--CCcchhhCCCcccceEEEecCcccc
Confidence 2677888899999999999999999999999999999999999999986531 1122322211234799999999999
Q ss_pred ccCCCCcceEEEEeCChhHHHHH--------HHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 307 GLYAERIGAMNVVCSSSDLAARV--------KSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
|+||+|+||+++ ++++++.+ ...........+.+++.++|.++..+|.+.. .+++++.++.+++
T Consensus 252 ~~pGlRiG~~i~---~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~-----~~~~~~~~~~~~~ 323 (409)
T PRK07590 252 GFTGTRCAYTVV---PKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG-----KAQIKELIDYYME 323 (409)
T ss_pred CCcCceeEEEEc---CHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc-----HHHHHHHHHHHHH
Confidence 999999999976 77755421 0111111122233578889999888887532 2346788999999
Q ss_pred HHHHHHHHHhhccCCCCCcccccCCcceeeecCC----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhh
Q 012628 379 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAK 443 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~ 443 (459)
+++.+.+.|+ ++| +.+..+.+|+|+|+.+ + .+++..+++++||.+.||. ||++.. ++++
T Consensus 324 ~r~~l~~~L~-~~~----~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~ 397 (409)
T PRK07590 324 NAKIIREGLE-SAG----FEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SREN 397 (409)
T ss_pred HHHHHHHHHH-hcC----CceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHHH
Confidence 9999999999 876 5777788999999875 2 3567788887899999872 999765 8899
Q ss_pred HHHHHHHHHHHH
Q 012628 444 CEYLADAIIDSY 455 (459)
Q Consensus 444 i~~~~~~l~~~~ 455 (459)
++.++++|.+++
T Consensus 398 l~~~l~rl~~~~ 409 (409)
T PRK07590 398 VLEAMERIKKAL 409 (409)
T ss_pred HHHHHHHHHhhC
Confidence 999999998753
No 50
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.7e-46 Score=373.38 Aligned_cols=336 Identities=14% Similarity=0.154 Sum_probs=273.8
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccch
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (459)
.++|+|+.|.| ..++ ++.+.+++.+.+.... ..|.+..|.+++|+++++++...++...+++ +|++ |+|++
T Consensus 30 ~~~i~l~~g~~----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~--t~G~~ 101 (386)
T PRK09082 30 HGAINLSQGFP----DFDG-PPYLVEALAYAMAAGH-NQYPPMTGVAALREAIAAKTARLYGRQYDADSEITV--TAGAT 101 (386)
T ss_pred CCEEEecCCCC----CCCC-CHHHHHHHHHHHHcCC-CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE--eCCHH
Confidence 57899999988 3433 6788888888776543 7899999999999999999887777766665 7999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++. ...+.+||+|++++|+|..|...++..|++++.+|++ ++++.+|++++++.+++ +++++++++||||
T Consensus 102 ~al~~~~--~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~---~~~~v~l~~p~NP 175 (386)
T PRK09082 102 EALFAAI--LALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQ-PPDFRVDWQRFAAAISP---RTRLIILNTPHNP 175 (386)
T ss_pred HHHHHHH--HHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccccCCHHHHHHhcCc---cceEEEEeCCCCC
Confidence 9999983 4447799999999999999999999999999999995 34689999999999875 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++++++++|+++|++||+++|+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+++
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~--- 250 (386)
T PRK09082 176 SGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA--GHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA--- 250 (386)
T ss_pred CCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC--CCCChhhCcCccCcEEEEeechhhccchhhhhhhhhC---
Confidence 99999999999999999999999999999999987531 1223333323346899999999999999999999965
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
++++++.+.+. ......+++.++|.++..++++. .+++++.++.++++++.+.+.|+ +.+ +++.+
T Consensus 251 ~~~l~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~~ 315 (386)
T PRK09082 251 PAALSAEFRKV----HQYNTFTVNTPAQLALADYLRAE------PEHYLELPAFYQAKRDRFRAALA-NSR----FKLLP 315 (386)
T ss_pred CHHHHHHHHHH----HhhhcCCCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHH-hCC----CcccC
Confidence 77855554443 32333467888999888888632 23467788999999999999999 776 67888
Q ss_pred CCcceeeecCC------C-HHHHHHHHhcccEEEcCCC------------cEEEccCChhhHHHHHHHHHH
Q 012628 402 RQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG------------RISLAGLSLAKCEYLADAIID 453 (459)
Q Consensus 402 ~~~g~f~~~~l------~-~~~~~~ll~~~gI~v~~gg------------Ris~~~~~~e~i~~~~~~l~~ 453 (459)
+++|+|+|+.+ + .++++.|++++||.+.||. |||++. +++++++++++|++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 316 CEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred CCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 99999999753 2 3556778888899998872 999998 88999999999875
No 51
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-45 Score=366.69 Aligned_cols=362 Identities=21% Similarity=0.262 Sum_probs=275.6
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccc---cCceEEeeccc
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK---EQRVATVQGLS 159 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~---~~~i~~~~t~g 159 (459)
.+++|.++|.+.+. +.+.+.+.+.+++.+... ....+|++..|.++||+++++++...++ ... .++|++ |+|
T Consensus 3 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~i--t~G 77 (388)
T PRK08637 3 ATKYNATIGMATEK-GGPMYLSSLQDLLNDLTP-DEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIV--TNA 77 (388)
T ss_pred ccceecceeeEecC-CCcchHHHHHHHHHhhcc-ccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeE--ccc
Confidence 36789999998444 444545666666665332 3348899999999999999999876543 222 257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-hCCCCeeeeeeecCCCCCCCHHHHHHHHHc-CCCCcEEEEeCC
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWSEYRYYDPKTVGLDFEGMIADIKA-APGGSFILLHGC 237 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~-~~~~~~~ii~~~ 237 (459)
+++++.++.. ..+.|||+|++++|+|+.|...+. ..|++++.+|+.. +++++|++.+++.++. .++.+++++++|
T Consensus 78 ~~~al~~~~~--~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~ 154 (388)
T PRK08637 78 LTHGLSLVAD--LFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNF 154 (388)
T ss_pred hHHHHHHHHH--HhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeC
Confidence 9999999843 336799999999999999998765 6899999999842 3467999999999871 123567788999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHh-----cCCeeEEeccCCCCCCCCCCCChhHH-HHHHhcCCeE--EEEEcCCcCcccC
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQE-----KNHIPFFDVAYQGFASGSLDNDASSV-RLFATRGMEL--LVAQSYSKNLGLY 309 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~-----~~~~ii~Deay~~~~~~~~~~~~~~~-~~~~~~~~~~--i~~~S~SK~~~~~ 309 (459)
||||||.++|.+++++|+++|++ |+++||+||+|.++.+++. ...++ ..+.+..+++ ++++||||.|++|
T Consensus 155 P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~--~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~p 232 (388)
T PRK08637 155 PNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDS--YKESLFAALANLHSNILAVKLDGATKEEFVW 232 (388)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCc--cchhhHHHhhcccccceEEEeccccccCCCc
Confidence 99999999999999999999875 8999999999999987542 12222 2223334464 4567999999999
Q ss_pred CCCcceEEEEe---CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 310 AERIGAMNVVC---SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 386 (459)
Q Consensus 310 G~RiG~~~~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (459)
|+|+||+++.. .+++..+.+...+....+....+++.++|.++..+|+++.+ .+++++.+..++++++.+.+.
T Consensus 233 GlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~~~r~~~~~~~ 308 (388)
T PRK08637 233 GFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF----DKEKQEKFQILKERYEKTKEV 308 (388)
T ss_pred ccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 99999995411 24665555544332222223347888999999999988654 456778888899999999999
Q ss_pred HhhccCCCCCcccccCCcceeeecCCC----HHHHHHHHhcccEEEcCCC----cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 387 LSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 387 L~~~~g~~~~~~~~~~~~g~f~~~~l~----~~~~~~ll~~~gI~v~~gg----Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|+ +.+.+..+.+.++++|+|+|+.+. .++++++++++||.+.+.+ ||+++..+++++++++++|.++++.+
T Consensus 309 l~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 309 LY-DGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred HH-hhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 98 664344478888999999998764 3456777777899887643 99999888999999999999999876
Q ss_pred C
Q 012628 459 S 459 (459)
Q Consensus 459 ~ 459 (459)
+
T Consensus 388 ~ 388 (388)
T PRK08637 388 R 388 (388)
T ss_pred C
Confidence 4
No 52
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-45 Score=337.56 Aligned_cols=367 Identities=15% Similarity=0.142 Sum_probs=300.5
Q ss_pred CccchhHHHhhh----CCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCC
Q 012628 68 DPILGVSEAFKA----DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD 143 (459)
Q Consensus 68 ~~i~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~ 143 (459)
.+++++...+.. +....+|.|+.|+|--..-++ ..+...+|+.+++..+..+.|+|..|....|+++|+|+++..
T Consensus 42 ~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~-ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l 120 (447)
T KOG0259|consen 42 VTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFR-TSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDL 120 (447)
T ss_pred ccHHHHHHHHhhcCCcccCceeccCCCCCCCcccccc-CCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCC
Confidence 345555544432 222368999999994333333 478999999999988878999999999999999999998888
Q ss_pred CCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHH
Q 012628 144 NSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (459)
Q Consensus 144 ~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i 223 (459)
...+++++|++ |+|.++|++++. ..+.+||..|++|.|+|+-|...+...|.+++++++.++++|.+|++.+++.+
T Consensus 121 ~~kl~a~DV~l--tsGC~qAIe~~i--~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~ 196 (447)
T KOG0259|consen 121 PNKLTADDVVL--TSGCSQAIELAI--SSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALA 196 (447)
T ss_pred CCccCcCceEE--eccchHHHHHHH--HHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhh
Confidence 78889999999 999999999994 44457999999999999999999999999999999988999999999999999
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCC
Q 012628 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (459)
Q Consensus 224 ~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (459)
++ +|+.+++.|||||+|.++|.+.+++|+++|++++++||.||+|.++.|++ ....++..| ...--++.++|.|
T Consensus 197 DE---NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~--~pfvpmg~f-ssiVPVitlggis 270 (447)
T KOG0259|consen 197 DE---NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD--KPFVPMGKF-SSIVPVITLGGIS 270 (447)
T ss_pred cc---CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC--CCccchhhc-cccCceEeecccc
Confidence 87 89999999999999999999999999999999999999999999999986 344454444 2334689999999
Q ss_pred cCcccCCCCcceEEEEeCChhHHH--HHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012628 304 KNLGLYAERIGAMNVVCSSSDLAA--RVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 381 (459)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (459)
|-|-.||||+||++. ..+..... .+.+.+....+ ...+++++.|.+.-.+|+... ++++......++.+.+
T Consensus 271 KrW~VPGWRlGWi~~-hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp-----~efF~k~~~~lk~na~ 343 (447)
T KOG0259|consen 271 KRWIVPGWRLGWIAL-HDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEKTP-----EEFFDKKLSFLKSNAD 343 (447)
T ss_pred cccccCCceeeeEEE-ecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhCh-----HHHHHHHHHHHHhhHH
Confidence 999999999999965 22222110 01122222222 245889999999988887532 4567888999999999
Q ss_pred HHHHHHhhccCCCCCcc-cccCCcceeeecCC----------CHHHHHHHHhcccEEEcCCC--------cEEEccCChh
Q 012628 382 KLFDSLSAKDKSGKDWS-FILRQIGMFSFTGL----------NKAQSDNMTNKWHVYMTKDG--------RISLAGLSLA 442 (459)
Q Consensus 382 ~l~~~L~~~~g~~~~~~-~~~~~~g~f~~~~l----------~~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e 442 (459)
..++.|+ +.+ + +. ...|+|.+|+|+++ +.+|+++|.+|..+.+.||- ||+++. ..+
T Consensus 344 l~y~~Lk-~IP--~-l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~~ 418 (447)
T KOG0259|consen 344 LCYSRLK-DIP--C-LTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EEE 418 (447)
T ss_pred HHHHHHh-cCC--C-cccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-ChH
Confidence 9999999 763 2 45 67899999999876 45789999999999999993 999998 889
Q ss_pred hHHHHHHHHHHHHhh
Q 012628 443 KCEYLADAIIDSYHN 457 (459)
Q Consensus 443 ~i~~~~~~l~~~~~~ 457 (459)
.+++++++|++++.+
T Consensus 419 ~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 419 MLEEAFSRIKEFCDR 433 (447)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998865
No 53
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.5e-45 Score=368.44 Aligned_cols=366 Identities=16% Similarity=0.138 Sum_probs=286.0
Q ss_pred cchhHHHhhhC--CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCcc
Q 012628 70 ILGVSEAFKAD--TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVL 147 (459)
Q Consensus 70 i~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~ 147 (459)
|.++.+.+++. .+.++++|+.|.|--....+ +++.+.+++.+.+.......|.+..|.+++|+++++++....+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 94 (403)
T TIGR01265 16 IRAIVDNLKVKPNPEKPIIPLSHGDPSVFGNLR-TDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKL 94 (403)
T ss_pred HHHHHHHHHHHHhcCCCeEEeCCCCCCccCCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Confidence 44555444432 24689999999981001123 3788999999888654446798999999999999999987777777
Q ss_pred ccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC
Q 012628 148 KEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 148 ~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~ 227 (459)
++++|++ |+|+|+++.++... .+.+||+|++++|+|..|...++..|++++.+++.+++++++|++.+++.+++
T Consensus 95 ~~~~ii~--t~G~t~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-- 168 (403)
T TIGR01265 95 TADDVVL--TSGCSQAIEICIEA--LANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE-- 168 (403)
T ss_pred CHHHEEE--ecChHHHHHHHHHH--hCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc--
Confidence 8999999 99999999998433 35799999999999999999999999999999985455788999999998865
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ....++..+ ....++++++||||.|+
T Consensus 169 -~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~~~~vi~~~S~SK~~~ 244 (403)
T TIGR01265 169 -KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASF-ASIVPVLSLGGISKRWV 244 (403)
T ss_pred -CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhh-ccCCcEEEEeecccccC
Confidence 67788889999999999999999999999999999999999999998753 122333333 23347999999999999
Q ss_pred cCCCCcceEEEEeCChhH-HHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDL-AARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 386 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (459)
+||+|+||+++ ..+++. .+.+.+.+...... ..+++.++|.++..+|.+.. ..++++.+++++++++.+.+.
T Consensus 245 ~pGlRiG~~v~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~ 317 (403)
T TIGR01265 245 VPGWRLGWIII-HDPHGIFRDTVLQGLKNLLQR-ILGPATIVQGALPDILENTP-----QEFFDGKISVLKSNAELCYEE 317 (403)
T ss_pred CCcceEEEEEE-eCchhhhHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhCh-----HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999954 112222 22244444333222 33678889999988886421 345788899999999999999
Q ss_pred HhhccCCCCCcccccCCcceeeecCCC----------HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHH
Q 012628 387 LSAKDKSGKDWSFILRQIGMFSFTGLN----------KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLA 448 (459)
Q Consensus 387 L~~~~g~~~~~~~~~~~~g~f~~~~l~----------~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~ 448 (459)
|+ .++ ++.+..|++|+|+|+.++ .++++++++++||.+.||. ||||+. +++++++++
T Consensus 318 L~-~~~---~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~-~~~~l~~~l 392 (403)
T TIGR01265 318 LK-DIP---GLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV-PESMLEEAC 392 (403)
T ss_pred Hh-cCC---CceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-CHHHHHHHH
Confidence 98 762 256677899999998652 3556777777899999983 999997 788999999
Q ss_pred HHHHHHHhhc
Q 012628 449 DAIIDSYHNV 458 (459)
Q Consensus 449 ~~l~~~~~~~ 458 (459)
++|.+++++.
T Consensus 393 ~~l~~~~~~~ 402 (403)
T TIGR01265 393 SRIKEFCERH 402 (403)
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 54
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=5e-46 Score=374.41 Aligned_cols=348 Identities=16% Similarity=0.195 Sum_probs=286.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc--CC-CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~-~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
.+.+++|+.|.| +...+| .....+++.+.+.. .. ...|.+..|.++||++|++++....|..+++++|++ |+
T Consensus 88 ~~~~i~f~~g~p-~~~~fp--~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~Iii--T~ 162 (459)
T COG1167 88 DPSVIDFAGGLP-DPSLFP--LEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVI--TS 162 (459)
T ss_pred CCceecCCCCCC-CcccCC--HHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEE--eC
Confidence 378999999997 333333 45666666666532 12 468888899999999999999878899999999999 99
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCC
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p 238 (459)
|+++|++++.+++ +.|||+|++++|+|.....+++..|++++.||++ ..++|+|.|++.++.. +...++++++.
T Consensus 163 G~q~al~l~~~~l--~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~-~~k~~y~~P~~ 236 (459)
T COG1167 163 GAQQALDLLLRLL--LDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQW-KPKAVYVTPTF 236 (459)
T ss_pred CHHHHHHHHHHHh--CCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhc-CCcEEEECCCC
Confidence 9999999985443 6699999999999999999999999999999995 4579999999999864 24567778999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
|||||.++|.+..++|+++|++||++||+||+|.++.+++.. .+++.. .+..++|++++||||+++ ||+|+||+++
T Consensus 237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p--~~~l~~-ld~~~rViy~gSFSK~l~-PglRlG~vv~ 312 (459)
T COG1167 237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPP--PPPLKA-LDAPGRVIYLGSFSKTLA-PGLRLGYVVA 312 (459)
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCC--CCChHh-hCCCCCEEEEeeehhhcc-cccceeeeeC
Confidence 999999999999999999999999999999999999987532 223333 245679999999999998 9999999977
Q ss_pred EeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 012628 319 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 398 (459)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 398 (459)
|++.++.+.. .+.....+++.+.|.+++.++.++.+ .++++++++.|+++++.+.+.|+ +.. |+...
T Consensus 313 ---p~~~~~~~~~----~k~~~~~~~s~~~Q~~la~~l~~G~~----~~hl~~lR~~y~~rr~~l~~~L~-~~~-~~~~~ 379 (459)
T COG1167 313 ---PPELIEKLLR----LKQAADLGPSSLSQAALAAFLLSGHY----DRHLRRLRREYARRRDALLEALA-EYL-PELAT 379 (459)
T ss_pred ---CHHHHHHHHH----HHHHhcCCCChHHHHHHHHHHHcCCH----HHHHHHHHHHHHHHHHHHHHHHH-HhC-CCCee
Confidence 8885554443 33345668899999999888886655 67899999999999999999999 763 33467
Q ss_pred cccCCcceeeecCC----CH-HHHHHHHhcccEEEcC-CC------------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 399 FILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTK-DG------------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 399 ~~~~~~g~f~~~~l----~~-~~~~~ll~~~gI~v~~-gg------------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+..|.+|+|+|+.+ +. ++++.+++ +||.+.| |. |++|+..+++++++++++|.+++++.
T Consensus 380 ~~~p~gG~flwl~l~~~~~~~~l~~~a~~-~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 380 WTRPEGGLFLWLELPEGIDARELLAAALE-KGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred eecCCceEEEEEEcCCCCCHHHHHHHHHH-CCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 88999999999966 33 45666666 5999988 41 99999989999999999999998763
No 55
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.1e-45 Score=367.88 Aligned_cols=355 Identities=14% Similarity=0.120 Sum_probs=279.4
Q ss_pred CCCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCC
Q 012628 65 APPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 144 (459)
Q Consensus 65 ~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~ 144 (459)
.++..+.++.+.+. .+++++|+.|.| ..+. ++.+.+++.+.+.... .+|.+..|.++||+++++++...+|
T Consensus 9 ~~~~~~~~~~~~~~---~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g 79 (387)
T PRK07777 9 FGTTIFAEMSALAV---RTGAVNLGQGFP----DEDG-PPEMLEAAQEAIAGGV-NQYPPGPGIPELRAAIAAQRRRRYG 79 (387)
T ss_pred cCccHHHHHHHHHh---hCCeEEccCCCC----CCCC-CHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 34445555555443 357899999998 3332 4567777777665443 6798899999999999999877778
Q ss_pred CccccC-ceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecC-CCCCCCHHHHHHH
Q 012628 145 SVLKEQ-RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP-KTVGLDFEGMIAD 222 (459)
Q Consensus 145 ~~~~~~-~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~-~~~~~d~e~l~~~ 222 (459)
..++++ +|++ |+|+++++.++ +...+.+||+|+++.|+|..|...++..|++++.++++++ .++.+|++++++.
T Consensus 80 ~~~~~~~~i~~--t~G~~~al~~~--~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~ 155 (387)
T PRK07777 80 LEYDPDTEVLV--TVGATEAIAAA--VLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAA 155 (387)
T ss_pred CCCCCCCcEEE--eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHh
Confidence 777776 7999 99999999987 4444679999999999999999999999999999998654 3678999999998
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcC
Q 012628 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (459)
Q Consensus 223 i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 302 (459)
+++ +++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++. ...++..+.+..+++++++||
T Consensus 156 ~~~---~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~ 230 (387)
T PRK07777 156 VTP---RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPGMRERTVTISSA 230 (387)
T ss_pred cCc---ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCCCcCcEEEEeec
Confidence 865 677888899999999999999999999999999999999999999887531 222333322224589999999
Q ss_pred CcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 012628 303 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQK 382 (459)
Q Consensus 303 SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (459)
||.||++|+|+||+++ ++++++.+... ......+.+.+.|.++..++.+. .+++++.++.++++++.
T Consensus 231 SK~~g~~GlRiG~~~~---~~~l~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~ 297 (387)
T PRK07777 231 AKTFNVTGWKIGWACG---PAPLIAAVRAA----KQYLTYVGGAPFQPAVAHALDHE------DAWVAALRDSLQAKRDR 297 (387)
T ss_pred hhhccCcCceeEEEec---CHHHHHHHHHH----HhhcccCCCCHHHHHHHHHHhCC------cHHHHHHHHHHHHHHHH
Confidence 9999999999999865 77755444432 22222245666777777777653 23367888999999999
Q ss_pred HHHHHhhccCCCCCcccccCCcceeeecCC------C-HHHHHHHHhcccEEEcCCC-------------cEEEccCChh
Q 012628 383 LFDSLSAKDKSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG-------------RISLAGLSLA 442 (459)
Q Consensus 383 l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l------~-~~~~~~ll~~~gI~v~~gg-------------Ris~~~~~~e 442 (459)
+.+.|+ +++ +++.++++++|+|+.+ + .+++++|++++||.+.||. ||+++. +++
T Consensus 298 l~~~L~-~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~ 371 (387)
T PRK07777 298 LAAGLA-EAG----FEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDD 371 (387)
T ss_pred HHHHHH-hCC----CCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHH
Confidence 999999 876 6788889999999653 2 4567888877899998861 999987 899
Q ss_pred hHHHHHHHHHHHHh
Q 012628 443 KCEYLADAIIDSYH 456 (459)
Q Consensus 443 ~i~~~~~~l~~~~~ 456 (459)
++++++++|++++.
T Consensus 372 ~l~~~l~~l~~~~~ 385 (387)
T PRK07777 372 TLDEAIRRLRALRG 385 (387)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988764
No 56
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=9.4e-46 Score=366.14 Aligned_cols=342 Identities=12% Similarity=0.087 Sum_probs=264.4
Q ss_pred chhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC
Q 012628 71 LGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ 150 (459)
Q Consensus 71 ~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~ 150 (459)
....+.+++..+.++++|+.|.| ..++ ++.+.+++.+.... ...|++..|.++||+++|+++...+|..++++
T Consensus 12 ~~~~~~~~~~~~~~~i~l~~~~p----~~~~-~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~ 84 (374)
T PRK05839 12 RELLKEITPNKEYKGLDLTIGEP----QFET-PKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRFKIELKEN 84 (374)
T ss_pred HHHHHHhhhcCCCCeEEcCCCCC----CCCC-CHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc
Confidence 34444444433458999999998 4443 68888888776532 47899999999999999999988888888899
Q ss_pred ceEEeecccchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCC
Q 012628 151 RVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 151 ~i~~~~t~ggt~a~~l~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 229 (459)
+|++ |+|+++++.++..++ .+ .+||.|++++|+|..|...++..|++++++|+++++++.+|++..+ + + +
T Consensus 85 ~I~i--t~G~~~al~~~~~~~-~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~---~ 155 (374)
T PRK05839 85 ELIP--TFGTREVLFNFPQFV-LFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-Q---E 155 (374)
T ss_pred eEEE--ecCcHHHHHHHHHHH-hcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-c---c
Confidence 9999 999999998873322 12 3789999999999999999999999999999965556777765432 2 2 5
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH-----hcCCeEEEEEcCCc
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-----TRGMELLVAQSYSK 304 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~S~SK 304 (459)
+++++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++ ...++.... ...+++++++||||
T Consensus 156 ~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~~~~~~~~vi~~~SfSK 232 (374)
T PRK05839 156 VDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILVGNESFKNVLVINSISK 232 (374)
T ss_pred ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhcccCccccCcEEEEecccc
Confidence 6788889999999999999999999999999999999999999986532 122222211 13368999999999
Q ss_pred CcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 305 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 384 (459)
Q Consensus 305 ~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (459)
.|++||+|+||+++ +++..+++.. .......+.+.+.|.++...+.+.+ ++++.+++++++++.+.
T Consensus 233 ~~~~~GlRiG~ii~---~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~ 298 (374)
T PRK05839 233 RSSAPGLRSGFIAG---DASILKKYKA----YRTYLGCASPLPLQKAAAVAWLDDE-------HAEFFRNIYAKNLKLAR 298 (374)
T ss_pred ccCCccceeEEEec---CHHHHHHHHH----HHhhcCCCCChHHHHHHHHHhccch-------HHHHHHHHHHHHHHHHH
Confidence 99999999999965 7775544433 3222233677788888877776543 35677888888888876
Q ss_pred HHHhhccCCCCCcccccCCcceeeecCC--CHHHHHHHHhcccEEEcCC----------C--cEEEccCChhhHHHHHHH
Q 012628 385 DSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKD----------G--RISLAGLSLAKCEYLADA 450 (459)
Q Consensus 385 ~~L~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~g----------g--Ris~~~~~~e~i~~~~~~ 450 (459)
+.|. +. .|++|+|+|+++ +.++++++++++||.+.|| + |||++. ++++++.++++
T Consensus 299 ~~l~--------~~--~p~gg~fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~ 367 (374)
T PRK05839 299 EILG--------IT--IPPATFYVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEI 367 (374)
T ss_pred HhcC--------CC--CCCeeEEEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHH
Confidence 6553 23 678999999987 3566778887789999986 2 999987 89999999999
Q ss_pred HHHHHh
Q 012628 451 IIDSYH 456 (459)
Q Consensus 451 l~~~~~ 456 (459)
|+++++
T Consensus 368 l~~~l~ 373 (374)
T PRK05839 368 IKTYLE 373 (374)
T ss_pred HHHHhh
Confidence 999875
No 57
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=2.5e-45 Score=366.13 Aligned_cols=343 Identities=13% Similarity=0.139 Sum_probs=272.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (459)
++++++|+.|.| ..++ ++.+.+++.+.+.......|++..|.++||+++++++...+|..++++ +|++ |+|+
T Consensus 28 ~~~~i~l~~g~p----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~--t~G~ 100 (395)
T PRK08175 28 GEDIIDFSMGNP----DGPT-PPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIV--TIGS 100 (395)
T ss_pred CCCeEEcCCCCC----CCCC-CHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--ccCc
Confidence 468999999987 2332 566777776665444447899999999999999999987778888887 7999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
+++++++. ...+.|||+|++++|+|+.+...++..|++++.+|++++. .++++++++++...++++++++++|||
T Consensus 101 ~~~l~~~~--~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~---~~~~~l~~~l~~~~~~~~~v~i~~p~N 175 (395)
T PRK08175 101 KEGLAHLM--LATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV---DFFNELERAIRESYPKPKMMILGFPSN 175 (395)
T ss_pred HHHHHHHH--HHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCC---CcHHHHHHHHhhccCCceEEEEeCCCC
Confidence 99999873 4447799999999999999999999999999999985332 347888888875434678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+....+++++++||||.||+||+|+||+++
T Consensus 176 PtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-- 251 (395)
T PRK08175 176 PTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW--KAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-- 251 (395)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC--CCcchhcCCCcccCEEEEeeccccccCcchhheeeeC--
Confidence 999999999999999999999999999999999887532 1122222211235688999999999999999999865
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
++++++.+.+ .......+++...|.++..+|.+. .++++++++.|+++++++.+.|+ ++| +.+.
T Consensus 252 -~~~l~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~L~-~~~----~~~~ 315 (395)
T PRK08175 252 -NPELVSALAR----IKSYHDYGTFTPLQVAAIAALEGD------QQCVRDIAEQYKRRRDVLVKGLH-EAG----WMVE 315 (395)
T ss_pred -CHHHHHHHHH----HHhhcccCCCcHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHH-HcC----Cccc
Confidence 8885554443 332223356666788887777653 34578889999999999999999 876 5777
Q ss_pred cCCcceeeecCCC--------HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 401 LRQIGMFSFTGLN--------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 401 ~~~~g~f~~~~l~--------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
.+++|+|+|+.+. .++++++++++||.+.||. ||+++. +++.+++++++|.+++++
T Consensus 316 ~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 316 MPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred CCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence 8889999998653 3556778877899999971 999985 889999999999998875
No 58
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2.8e-45 Score=366.32 Aligned_cols=349 Identities=17% Similarity=0.170 Sum_probs=280.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+.++|+|+.|.|-. ...++ ++.+.+++.+.+... ...|++..|.++||+++++++...+|..+++++|++ |+|++
T Consensus 29 ~~~~i~l~~g~p~~-~~~~p-~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G~~ 103 (398)
T PRK08363 29 GIKVIRLNIGDPVK-FDFQP-PEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRV--TAAVT 103 (398)
T ss_pred CCCeEEEeCCCCCc-CCCCC-CHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEE--eCCHH
Confidence 46899999999832 12232 788899998877544 267988999999999999999888888889999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++ +...+.+||+|++++|+|..|...++.+|++++.++..+++++.+|++.+++.+++ +++++++++||||
T Consensus 104 ~al~~~--~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~NP 178 (398)
T PRK08363 104 EALQLI--FGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE---KTKAIAVINPNNP 178 (398)
T ss_pred HHHHHH--HHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc---ceEEEEEECCCCC
Confidence 999998 34447899999999999999999999999998888432345678999999998865 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++|+++|+++|+||+|.++.+++ ...++..+ ....++++++||||.|+++|+|+||+++ .+
T Consensus 179 tG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~---~~~~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~~~-~~ 253 (398)
T PRK08363 179 TGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG---KHVSPGSL-TKDVPVIVMNGLSKVYFATGWRLGYIYF-VD 253 (398)
T ss_pred CCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC---cccCHHHc-CcCCcEEEEecchhccCCccceEEEEEE-eC
Confidence 9999999999999999999999999999999987653 22233332 2345799999999999999999999843 24
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++.+.+.+.......+ +++.++|.++..+|.+. .+++++.+++++++++.+.+.|+ +++ ++.+..
T Consensus 254 ~~~~~~~l~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~------~~~l~~~~~~~~~~~~~l~~~L~-~~~---~~~~~~ 322 (398)
T PRK08363 254 PEGKLAEVREAIDKLARIRL-CPNTPAQFAAIAGLTGP------MDYLEEYMKKLKERRDYIYKRLN-EIP---GISTTK 322 (398)
T ss_pred cHHHHHHHHHHHHHHhcccc-cCChHHHHHHHHHHhCC------hHHHHHHHHHHHHHHHHHHHHHh-cCC---CCEecC
Confidence 66666666666544322222 67888899888888653 24467888999999999999998 762 267778
Q ss_pred CCcceeeecCC-------CHHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 402 RQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 402 ~~~g~f~~~~l-------~~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
|+||||+|+.+ +.+++.++++++||.+.||. |||++. +++++++++++|++++++
T Consensus 323 p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 323 PQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFMRE 394 (398)
T ss_pred CCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 99999999633 24566777777899999872 999976 889999999999998875
No 59
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=5.4e-45 Score=364.77 Aligned_cols=352 Identities=16% Similarity=0.131 Sum_probs=273.3
Q ss_pred CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
.++++++|+.|.| +..+.++ ++.+.+++.+.+.. ...|++..|.++||+++|+++.......+++++|++ |+|+
T Consensus 31 ~~~~~i~l~~g~p-~~~~~~~-~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~--t~G~ 104 (404)
T PRK09265 31 EGHKILKLNIGNP-APFGFEA-PDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYI--GNGV 104 (404)
T ss_pred cCCCeEEecCCCC-CcCCCCC-CHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEE--eCCh
Confidence 3568999999987 3223333 67788887776543 368999999999999999998765544678999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++. ...+.+||+|++++|+|..|...++..|++++.++++.++++.+|++.+++.+++ +++++++++|||
T Consensus 105 ~~~l~~~~--~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~P~N 179 (404)
T PRK09265 105 SELIVMAM--QALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP---RTKAIVIINPNN 179 (404)
T ss_pred HHHHHHHH--HHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc---cceEEEEECCCC
Confidence 99999883 3346799999999999999999999999999999875445678999999998865 678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+ ....++++++||||.||+||+|+||+++ .
T Consensus 180 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~~~pGlRiG~~v~-~ 255 (404)
T PRK09265 180 PTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASL-APDLLCVTFNGLSKAYRVAGFRVGWMVL-S 255 (404)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHc-CCCceEEEEecchhhccCcccceEEEEE-e
Confidence 999999999999999999999999999999999987531 22233332 2234789999999999999999999953 2
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
++++..+.+.+.+.... ....+++.++|.++..+|.+.+.. .+.+ +..+++.++++.+.+.|+ +++ ++++.
T Consensus 256 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~---~~~~-~~~~~~~~~r~~~~~~L~-~~~---~~~~~ 326 (404)
T PRK09265 256 GPKKHAKGYIEGLDMLA-SMRLCANVPAQHAIQTALGGYQSI---NELI-LPGGRLYEQRDRAWELLN-AIP---GVSCV 326 (404)
T ss_pred CchHHHHHHHHHHHHHh-ccccCCCcHHHHHHHHHhcCchhH---HHHH-HHHHHHHHHHHHHHHHHh-cCC---CCccc
Confidence 45554444555443322 223467888999998888754322 1222 223567778999999998 762 26788
Q ss_pred cCCcceeeecCCC---------HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 401 LRQIGMFSFTGLN---------KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 401 ~~~~g~f~~~~l~---------~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
.|++|+|+|+.++ .+++.++++++||.+.||. ||+++. ++|+++.++++|+++++.
T Consensus 327 ~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~-~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 327 KPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLP-RVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred CCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHH
Confidence 8999999997542 3456677777899999872 999975 899999999999998875
No 60
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-45 Score=363.52 Aligned_cols=356 Identities=17% Similarity=0.154 Sum_probs=278.5
Q ss_pred CCccchhHHHhhh--CCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCC
Q 012628 67 PDPILGVSEAFKA--DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADN 144 (459)
Q Consensus 67 ~~~i~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~ 144 (459)
+..+.++.+.+.. ..+.+.|+|+.|.| ..++ ++.+.+++.+.+.......|.+..|.++||+++++++...+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g 85 (386)
T PRK07550 11 PPPIPEVRAWLAGYDGADGPLIDLSQAVP----GYPP-PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYG 85 (386)
T ss_pred ChHHHHHHHHHHHHhhcCCCeEEeCCCCC----CCCC-CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3344454443321 23457899999998 3333 788888888876544446798999999999999999988888
Q ss_pred CccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHH
Q 012628 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIK 224 (459)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~ 224 (459)
..+++++|++ |+|+++++.++... .+.+||+|++++|+|..+...++..|++++.+++++++++.+|++.+++.++
T Consensus 86 ~~~~~~~i~~--t~G~~~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~ 161 (386)
T PRK07550 86 AAISPEQVHI--TSGCNQAFWAAMVT--LAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT 161 (386)
T ss_pred CCCCcceEEE--ecCcHHHHHHHHHH--hcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc
Confidence 8888999999 99999999998433 3679999999999999999999999999999999644567789999999987
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCc
Q 012628 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (459)
Q Consensus 225 ~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 304 (459)
+ +++++++++||||||.+++.+++++|+++|++||++||+||+|.++.++.. ...++....+..+++++++||||
T Consensus 162 ~---~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK 236 (386)
T PRK07550 162 P---RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGG--APHDLFADPDWDDTLVHLYSFSK 236 (386)
T ss_pred c---cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCcchhhCCCccccEEEEecchh
Confidence 6 566777789999999999999999999999999999999999999875421 11111111122457999999999
Q ss_pred CcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 305 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 384 (459)
Q Consensus 305 ~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (459)
.||++|+|+||+++ +++.++.+.. .......+++.++|.++..+|.+. .+++++.++.++++++.+.
T Consensus 237 ~~g~~G~RiG~i~~---~~~~~~~~~~----~~~~~~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~ 303 (386)
T PRK07550 237 SYALTGHRVGAVVA---SPARIAEIEK----FMDTVAICAPRIGQIAVAWGLPNL------ADWRAGNRAEIARRRDAFR 303 (386)
T ss_pred hccCcccceEeeec---CHHHHHHHHH----HHhhcccCCCcHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHH
Confidence 99999999999965 7775544443 333334567888999998888752 3446778889999999999
Q ss_pred HHHhhccCCCCCcccccCCcceeeecCC-----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHH
Q 012628 385 DSLSAKDKSGKDWSFILRQIGMFSFTGL-----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLA 448 (459)
Q Consensus 385 ~~L~~~~g~~~~~~~~~~~~g~f~~~~l-----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~ 448 (459)
+.|. +++ ++.+ .+.+|+|+|+.+ + .+++++|++++||.+.||. ||+++..+++++++++
T Consensus 304 ~~L~-~~~---~~~~-~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~ 378 (386)
T PRK07550 304 AVFA-RLP---GWEL-LASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELV 378 (386)
T ss_pred HHHH-hCC---Ccee-CCCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHH
Confidence 9998 752 1443 467899999743 3 4557778887899999962 9999977889999999
Q ss_pred HHHHHH
Q 012628 449 DAIIDS 454 (459)
Q Consensus 449 ~~l~~~ 454 (459)
++|.++
T Consensus 379 ~~l~~~ 384 (386)
T PRK07550 379 ERLRAF 384 (386)
T ss_pred HHHHhh
Confidence 999764
No 61
>PLN02368 alanine transaminase
Probab=100.00 E-value=3e-45 Score=363.18 Aligned_cols=323 Identities=16% Similarity=0.153 Sum_probs=249.7
Q ss_pred CCCceeecccccCCCC-----CC----------------c-----cCcHHHHHHHHHHhh-cCCCCCCCCCcccHHHHHH
Q 012628 82 DEKKLNLGVGAYRTEE-----LQ----------------P-----YVLDVVKKAENLMLE-RGENKEYLPIEGLAAFNKV 134 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~-----~~----------------~-----~~~~~v~~a~~~~~~-~~~~~~Y~~~~g~~~lr~a 134 (459)
+.++|+|++|+| |.. ++ | ..++.+.+++..... ......|++..|.++||++
T Consensus 37 g~~vi~l~iG~P-d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~a 115 (407)
T PLN02368 37 GKKIIFTNVGNP-HALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKE 115 (407)
T ss_pred hhhhhcccCCCh-hHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Confidence 468999999998 210 01 1 125566666554322 2234789999999999999
Q ss_pred HHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCC
Q 012628 135 TAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG 213 (459)
Q Consensus 135 ia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~ 213 (459)
||+++.+.+|..+++++|++ |+|+++++.++ +...+ .+||+|++++|+|+.|...++.+|++++.+|++++++|+
T Consensus 116 ia~~~~~~~g~~~~~~~I~i--t~Ga~~al~~~--~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~ 191 (407)
T PLN02368 116 VAEFIERRDGYPSDPELIFL--TDGASKGVMQI--LNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWG 191 (407)
T ss_pred HHHHHHHhcCCCCChhhEEE--cccHHHHHHHH--HHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCC
Confidence 99999888788889999999 99999999988 33345 599999999999999999999999999999997666799
Q ss_pred CCHHHHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH
Q 012628 214 LDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (459)
Q Consensus 214 ~d~e~l~~~i~~~---~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~ 290 (459)
+|++.+++++++. ..++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.|++.. ...++..+.
T Consensus 192 ~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~-~~~s~~~~~ 270 (407)
T PLN02368 192 LDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDER-PFISAKKVL 270 (407)
T ss_pred CCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC-CcccHHHHH
Confidence 9999999998741 125788889999999999999999999999999999999999999999986421 222333322
Q ss_pred h-------cCCeEEEEEcCCcCc-ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChh--
Q 012628 291 T-------RGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA-- 360 (459)
Q Consensus 291 ~-------~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-- 360 (459)
. ..+++++++||||.| |++|||+||+++...+++.++.+.. .... ..+++.++|.++..+|++++
T Consensus 271 ~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~----~~~~-~~~~~~~~Q~aa~~~l~~~~~~ 345 (407)
T PLN02368 271 MDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYK----VASI-ALSPNVSGQIFMGLMVNPPKPG 345 (407)
T ss_pred hhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHH----Hhcc-cCCCCcHHHHHHHHHhCCCCCC
Confidence 1 234899999999998 8999999999521147774444433 3222 33688899999999997642
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC--CHHHHHH
Q 012628 361 --LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDN 419 (459)
Q Consensus 361 --~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ 419 (459)
....|.++++++++.|+++++.+.+.|+ +++ ++.+..|+|+||+|+++ ..+.+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~-~~~---g~~~~~P~Gafy~~~~i~lp~~~~~~ 404 (407)
T PLN02368 346 DISYDQFVRESKGILESLRRRARMMTDGFN-SCK---NVVCNFTEGAMYSFPQIKLPPKAIEA 404 (407)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCC---CeEeCCCCeeeEeccCCCCCHHHHHH
Confidence 1123456667789999999999999999 872 16888999999999754 5555543
No 62
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=2.1e-45 Score=370.72 Aligned_cols=330 Identities=16% Similarity=0.141 Sum_probs=264.5
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
..+++|+.|.| ..++ +|.+.+++.+.... ...|++..|.++||+++++++....+ .+++|++ |+|+++
T Consensus 85 ~~~i~L~~g~p----~~~~-~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iii--t~G~~~ 152 (431)
T PRK15481 85 TPLHDLAGGNP----DPQR-LPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDL--TSGAID 152 (431)
T ss_pred chhhhhhcCCC----ChhH-hHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEE--ecCcHH
Confidence 46789999987 3332 45677777765532 35799999999999999999764322 2468999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEe-CCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH-GCAHNP 241 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~-~~p~NP 241 (459)
++.++ +...+.|||.|++++|+|..|...++..|++++.+|++ + .++|++.++++++. +++++++ +|||||
T Consensus 153 al~~~--~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~--~g~~~~~l~~~~~~---~~k~i~~~p~p~NP 224 (431)
T PRK15481 153 AIERL--LCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVD-A--EGMQPEKLERALAQ---GARAVILTPRAHNP 224 (431)
T ss_pred HHHHH--HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccC-C--CCCCHHHHHHHHhc---CCCEEEECCCCCCC
Confidence 99998 44447799999999999999999999999999999984 2 25899999999875 4545444 599999
Q ss_pred CCCCCCHHHHHHHHHHHHhc-CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 242 TGIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~-~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
||.+++.+++++|+++|++| +++||+||+|.++.+++. ...+ ....+++++++||||.|+ ||+|+||+++
T Consensus 225 TG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~---~~~~---~~~~~~vi~~~SfSK~~~-~GlRiG~~i~-- 295 (431)
T PRK15481 225 TGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY---HSVI---PQTTQRWALIRSVSKALG-PDLRLAFVAS-- 295 (431)
T ss_pred CCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC---CCCC---cCCCCCEEEEeeeccccC-CCceeEEEeC--
Confidence 99999999999999999999 999999999999975421 1111 113468999999999999 9999999866
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
+++..+.+.... .....+++.++|.++..+|+++++ .+++++.++.++++++.+.+.|+ +.| +.+.
T Consensus 296 -~~~~~~~~~~~~----~~~~~~~s~~~q~a~~~~l~~~~~----~~~l~~~~~~~~~~r~~~~~~L~-~~~----~~~~ 361 (431)
T PRK15481 296 -DSATSARLRLRL----NSGTQWVSHLLQDLVYACLTDPEY----QARLAQARLFYAQRRQKLARALQ-QYG----IAIP 361 (431)
T ss_pred -CHHHHHHHHHHH----hccccCCCHHHHHHHHHHHhCccH----HHHHHHHHHHHHHHHHHHHHHHH-HcC----Cccc
Confidence 777555553322 222336788999999999988755 45688999999999999999999 876 5676
Q ss_pred cCCcceeeecCCC---HHHHHHHHhcccEEEcCCC-----------cEEEccCChhhHHHHHHHHHHHHh
Q 012628 401 LRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 401 ~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~gg-----------Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
.|++|+|+|+.+. .++++.|.+ +||.+.||. ||||+..+++++++++++|++++.
T Consensus 362 ~p~gg~f~~~~l~~~~~~~~~~l~~-~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 362 SPGDGLNLWLPLDTDSQATALTLAK-SGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred cCCCeEEEEEECCCCHHHHHHHHHH-CCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 8999999999873 355666654 699999861 999998889999999999999875
No 63
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-45 Score=370.53 Aligned_cols=339 Identities=14% Similarity=0.104 Sum_probs=257.6
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcC-CCCcc-c--cCceEEeeccc
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGA-DNSVL-K--EQRVATVQGLS 159 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~-~~~~~-~--~~~i~~~~t~g 159 (459)
++|+|+.|+| ++++ ++.+.++...+ . + ..|++..|.+++|++|++++..+ .+... . +++|++ |.|
T Consensus 101 ~~i~l~~g~p----~~~~-~~~v~e~~~~~-~-~--~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~v--T~G 169 (527)
T PRK09275 101 DAVSYVRDQL----GFDA-DEFVYELVDGI-I-G--DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFA--VEG 169 (527)
T ss_pred HHHhhcCCCC----CCCC-CHHHHHHHHHH-h-c--CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 4799999999 6765 77788855444 3 2 35999999999999999855443 22221 2 348999 999
Q ss_pred chhHHHHHHHHH---HHhCCCCEEEEcCCCCcchHHHhhhCCCC--eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEE
Q 012628 160 GTGSLRLAAALI---ERYFPGAKVLISSPTWGNHKNIFNDARVP--WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL 234 (459)
Q Consensus 160 gt~a~~l~~~~~---~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~--v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii 234 (459)
+++++..+...+ ..+.|||+|++++|+|+.|...++..|+. ++.++.+++++|.+|++.+++++++ ++++++
T Consensus 170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~---~tkai~ 246 (527)
T PRK09275 170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP---SIKALF 246 (527)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC---CCCEEE
Confidence 999999884432 14679999999999999999998877654 4555554456799999999998765 788888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHh--cCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCC
Q 012628 235 HGCAHNPTGIDPTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAER 312 (459)
Q Consensus 235 ~~~p~NPTG~~~s~~~l~~i~~l~~~--~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 312 (459)
++|||||||.+++.+++++|+++|++ +|++||+||+|.++.+. ..++... ..+++++++||||.||++|||
T Consensus 247 l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~s~~~~--~~~~~I~v~SfSK~f~mtG~R 319 (527)
T PRK09275 247 LVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-----FRSLFAV--LPYNTILVYSFSKYFGATGWR 319 (527)
T ss_pred EeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-----ccCHHHh--CCCCEEEEeehhhhccCcHhH
Confidence 89999999999999999999999964 59999999999998742 1222221 235899999999999999999
Q ss_pred cceEEEEeCChhHHHHHHH--------------------------------HHHhhccccccCCchHHHHHH-----HHH
Q 012628 313 IGAMNVVCSSSDLAARVKS--------------------------------QLKRLARPMYSNPPVHGARIV-----ANV 355 (459)
Q Consensus 313 iG~~~~v~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~-----~~~ 355 (459)
+||+++ +++...+++++ ....++...+.+++.+.|.++ ..+
T Consensus 320 lG~i~~--~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~al 397 (527)
T PRK09275 320 LGVIAL--HEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFAL 397 (527)
T ss_pred Hhhhhc--CchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 999954 33333333322 224455555667787777762 233
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCC---------------------H
Q 012628 356 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---------------------K 414 (459)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~---------------------~ 414 (459)
|.+. .++++++++.++++++.+.+.|. . + +...+|+|+||+|+++. .
T Consensus 398 l~~~------~~~~~~~~~~~~~Rr~~l~~~Lg-~-~----~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~ 465 (527)
T PRK09275 398 LDEE------DAYKKAMKDIIRRRYKALYEGLG-L-P----EPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPV 465 (527)
T ss_pred HhCc------hHHHHHHHHHHHHHHHHHHHHcC-C-C----CcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHH
Confidence 5443 23467889999999999988875 2 2 34457899999998652 2
Q ss_pred HHHHHHHhcccEEEcCCC---------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 415 AQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 415 ~~~~~ll~~~gI~v~~gg---------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
+++.+|++++||.+.||. |||++.++++++.++.++|++++++
T Consensus 466 ~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 466 DLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred HHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 457799999999999983 9999987899999999999998875
No 64
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-44 Score=360.96 Aligned_cols=341 Identities=16% Similarity=0.171 Sum_probs=272.2
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.++++|+.|.| ..++ ++.+.+++.+.... ...|++..|.+++|+++++++. .++..+++++|++ |+|+++
T Consensus 30 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~i~~--t~G~~~ 99 (397)
T PRK07568 30 IKVYHLNIGQP----DIKT-PEVFFEAIKNYDEE--VLAYSHSQGIPELREAFAKYYK-KWGIDVEPDEILI--TNGGSE 99 (397)
T ss_pred CCEEEecCCCC----CCCC-CHHHHHHHHHHhcC--CcCcCCCCCCHHHHHHHHHHHH-HhCCCCCcceEEE--cCChHH
Confidence 56899999997 4333 78888888776532 4679999999999999999987 5677788999999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCC-CCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVG-LDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~-~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
++.++. ...+.+||+|++++|+|..|...++..|++++.+++++++++. .|++.+++++++ +++++++++||||
T Consensus 100 al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~---~~~~v~i~~p~NP 174 (397)
T PRK07568 100 AILFAM--MAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP---KTKAILISNPGNP 174 (397)
T ss_pred HHHHHH--HHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc---cceEEEEECCCCC
Confidence 999984 3346799999999999999999999999999999985334444 367999888865 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+ +++
T Consensus 175 tG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~--~~~ 250 (397)
T PRK07568 175 TGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL--KYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCL--ISK 250 (397)
T ss_pred CCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC--CccChhhcCCCcCCEEEEecchhhccCCCcceEEE--ecC
Confidence 99999999999999999999999999999999987531 22233333223568999999999999999999998 445
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++.+.+. ... ..+++.+.|.++..+|++. .+++++.++.++++++.+.+.|+ +++ ++.+..
T Consensus 251 ~~~~~~~~~~~----~~~-~~~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~---~~~~~~ 315 (397)
T PRK07568 251 NKELIAAAMKL----CQA-RLSPPTLEQIGAAALLDTP------ESYFDEVREEYKKRRDILYEELN-KIP---GVVCEK 315 (397)
T ss_pred CHHHHHHHHHH----hhc-cCCCCcHHHHHHHHHhhCC------HHHHHHHHHHHHHHHHHHHHHHh-cCC---CceecC
Confidence 56654444332 212 2367788999998888754 23467889999999999999998 763 156778
Q ss_pred CCcceeeecCCC----HHHHHHHHhc-----ccEEEcCC-----------C--cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 402 RQIGMFSFTGLN----KAQSDNMTNK-----WHVYMTKD-----------G--RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 402 ~~~g~f~~~~l~----~~~~~~ll~~-----~gI~v~~g-----------g--Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|+||+|+|+.+. .++.+.++++ +||.+.|| + ||||+. +++++++++++|.+++++.
T Consensus 316 p~g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 316 PKGAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILKEALEKY 393 (397)
T ss_pred CCcceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHh
Confidence 899999998762 3556777664 69999885 1 999986 7899999999999988764
No 65
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.7e-44 Score=354.53 Aligned_cols=329 Identities=14% Similarity=0.117 Sum_probs=265.4
Q ss_pred ceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccchhH
Q 012628 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTGS 163 (459)
Q Consensus 85 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt~a 163 (459)
+++|+.|.| ..++ ++.+.+++.+.... ...|++..|.++||+++++++...+|+.++++ +|++ |+|++++
T Consensus 2 ~~~~~~g~p----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iii--t~Gs~~a 72 (350)
T TIGR03537 2 LFDFGTGDP----KEPT-PPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP--SAGSKEA 72 (350)
T ss_pred eEeccCCCC----CCCC-CHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE--cCChHHH
Confidence 579999988 4443 78899998887643 47798889999999999999988888888887 8999 9999999
Q ss_pred HHHHHHHHHHhCCC---CEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 164 LRLAAALIERYFPG---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 164 ~~l~~~~~~~~~~g---d~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
+.++. ...+.+| |+|++++|+|..|...++..|++++.+|+++++++.+|++++++++++ +++++++++|||
T Consensus 73 i~~~~--~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~p~N 147 (350)
T TIGR03537 73 IFHFP--LVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE---ETKIVWINYPHN 147 (350)
T ss_pred HHHHH--HHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh---ccEEEEEeCCCC
Confidence 99983 3346676 699999999999999999999999999996455678999999999876 678888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||++||+||+|.++.+++. ..++..+ ..+++++++||||.+|++|+|+||+++
T Consensus 148 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~-- 220 (350)
T TIGR03537 148 PTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP---PHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAG-- 220 (350)
T ss_pred CcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC---CCchhhc--CcCCEEEEeecccccCCccccceeeec--
Confidence 999999999999999999999999999999998876431 1122221 346899999999999999999999865
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
+++..+.+... ......+++.++|.++...+.+.. ++++.+++++++++.+.+.|+ +.| +++.
T Consensus 221 -~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~r~~l~~~~~~~~~~l~-~~g----~~~~ 283 (350)
T TIGR03537 221 -DEKLISFLRKL----RANFGVASPDFVQAAAKAAWSDDN-------HVLERRKIFKRKRDLFIEFFN-KVG----LEYL 283 (350)
T ss_pred -CHHHHHHHHHH----HHhhccCCCHHHHHHHHHHhCCcH-------HHHHHHHHHHHHHHHHHHHHH-HCC----Cccc
Confidence 77755554433 222333566667777766666532 356778899999999999999 876 5778
Q ss_pred cCCcceeeecCC----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHH
Q 012628 401 LRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIID 453 (459)
Q Consensus 401 ~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~ 453 (459)
.+++|+|+|+.+ + .++++.|++ +||.+.||. ||+++. +++++++++++|++
T Consensus 284 ~~~g~~~~~~~~~~~~~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~~-~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 284 YPDATFYLWVKVPSGIDAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVP-TLEECEEALRLWER 349 (350)
T ss_pred CCCeEEEEEEECCCCCCHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHhc
Confidence 889999999855 2 345667766 699999862 999975 88999999998865
No 66
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=3.3e-44 Score=358.69 Aligned_cols=337 Identities=16% Similarity=0.139 Sum_probs=259.1
Q ss_pred CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC----CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
+++++++|+.|+| ..++ ++.+.+++.+.+.+. ....|.|..|.++||+++|+++... .+++++|++
T Consensus 31 ~~~~~i~l~~~~~----~~~~-~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~i-- 100 (402)
T TIGR03542 31 PSADIIRLGIGDT----TQPL-PASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFI-- 100 (402)
T ss_pred CCCCeEEcCCCCC----CCCC-CHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEE--
Confidence 3568999999987 4443 788888888877542 2256989999999999999986432 266899999
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCC-----------CeeeeeeecCCCCCCCHHHHHHHHHc
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV-----------PWSEYRYYDPKTVGLDFEGMIADIKA 225 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~-----------~v~~v~~~~~~~~~~d~e~l~~~i~~ 225 (459)
|+|+++++.++ ...+.+||+|++++|+|..|...++.+|+ +++++|.++++++.+|++. .
T Consensus 101 t~Ga~~al~~l---~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~ 171 (402)
T TIGR03542 101 SDGAKCDVFRL---QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------E 171 (402)
T ss_pred CCCcHHHHHHH---HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------c
Confidence 99999999985 34467999999999999999999999999 9999998544445555421 1
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC
Q 012628 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (459)
Q Consensus 226 ~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (459)
+++++++++|||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+....+++++++||||.
T Consensus 172 --~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~ 247 (402)
T TIGR03542 172 --PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS--LPHSIFEIPGAKECAIEFRSFSKT 247 (402)
T ss_pred --CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC--CCcchhhCCCCcccEEEEecCccc
Confidence 2567888899999999999999999999999999999999999999986531 112222221123578999999999
Q ss_pred cccCCCCcceEEEEeCChhHH----HHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSSSDLA----ARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 381 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (459)
||+||+|+||+++ +++++ +.+...........+.+++.++|.++..++.+..+ +.+.+.++.++++++
T Consensus 248 ~g~pGlRiG~~i~---~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-----~~~~~~~~~~~~~~~ 319 (402)
T TIGR03542 248 AGFTGVRLGWTVV---PKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL-----QPILEAISYYMENAR 319 (402)
T ss_pred cCCCCcceEEEEe---cHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch-----hHHHHHHHHHHHHHH
Confidence 9999999999966 66644 11222222212223335778899988888876543 224567788999999
Q ss_pred HHHHHHhhccCCCCCcccccCCcceeeecCC----C-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHH
Q 012628 382 KLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEY 446 (459)
Q Consensus 382 ~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l----~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~ 446 (459)
.+.+.|+ +.| +++..+.+|+|+|+.+ + .++++.+++++||.+.||. ||+++. ++++++.
T Consensus 320 ~~~~~L~-~~~----~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~ 393 (402)
T TIGR03542 320 ILRKALE-AAG----FKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVE 393 (402)
T ss_pred HHHHHHH-hcC----ceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHH
Confidence 9999999 776 5677778899999865 2 3567888877899999972 999877 8899999
Q ss_pred HHHHHHHH
Q 012628 447 LADAIIDS 454 (459)
Q Consensus 447 ~~~~l~~~ 454 (459)
++++|+++
T Consensus 394 ~l~~l~~~ 401 (402)
T TIGR03542 394 ACERIKEA 401 (402)
T ss_pred HHHHHHhh
Confidence 99999875
No 67
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=9e-44 Score=351.32 Aligned_cols=346 Identities=14% Similarity=0.124 Sum_probs=262.6
Q ss_pred ccCCCCCCCCCccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHH
Q 012628 58 RFEGVTMAPPDPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE 137 (459)
Q Consensus 58 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~ 137 (459)
++++++..+...+.+....... ..+++++|+.|.| ..+ .++.+.+++.+... ..+|++..|.+++|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~~~p----~~~-~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~ 73 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAA-HPDGIVDLSVGTP----VDP-VPPVIQEALAAAAD---APGYPTTAGTPELREAIVG 73 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHh-cCCCEEEcCCCCC----CCC-CCHHHHHHHHHHHh---hCCCCCccCCHHHHHHHHH
Confidence 3455666566555554433332 3357899999987 333 26788888876543 2579888999999999999
Q ss_pred HHhcCCCCc-cccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCH
Q 012628 138 LLFGADNSV-LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF 216 (459)
Q Consensus 138 ~l~~~~~~~-~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~ 216 (459)
++...+|.. +++++|++ |+|+++++.++..++ .+.+||+|++++|+|+.|...++..|++++.++. +
T Consensus 74 ~l~~~~~~~~~~~~~I~i--t~G~~~~i~~~~~~l-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~ 141 (364)
T PRK07865 74 WLARRRGVTGLDPAAVLP--VIGSKELVAWLPTLL-GLGPGDVVVIPELAYPTYEVGARLAGATVVRADS---------L 141 (364)
T ss_pred HHHHHcCCCCCCcccEEE--ccChHHHHHHHHHHH-cCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------h
Confidence 998887876 88999999 999999999873222 1479999999999999999999999999887742 2
Q ss_pred HHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH--hcCC
Q 012628 217 EGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGM 294 (459)
Q Consensus 217 e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~--~~~~ 294 (459)
++++. ++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ....+.... ...+
T Consensus 142 ~~l~~------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~ 213 (364)
T PRK07865 142 TELGP------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE--PVSILDPRVCGGDHT 213 (364)
T ss_pred hhCCc------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC--CCccccccccCCccc
Confidence 22221 2567888889999999999999999999999999999999999999887531 111111100 1235
Q ss_pred eEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 012628 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 374 (459)
Q Consensus 295 ~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 374 (459)
++++++||||.|+++|+|+||+++ +++.++.+.... .....+++.+.|.++..+|.+.+ ++++.++
T Consensus 214 ~~i~~~S~SK~~~~~GlRiG~i~~---~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l~~~~-------~~~~~~~ 279 (364)
T PRK07865 214 GLLAVHSLSKQSNLAGYRAGFVAG---DPALVAELLEVR----KHAGMMVPAPVQAAMVAALGDDA-------HVREQRE 279 (364)
T ss_pred eEEEEeechhccCCCceeeEEEec---CHHHHHHHHHHH----HhcCCCcCHHHHHHHHHHhCCHH-------HHHHHHH
Confidence 899999999999999999999865 888555544432 22233677889998888887642 3567888
Q ss_pred HHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC--CHHHHHHHHhcccEEEcCCC----------cEEEccCChh
Q 012628 375 RIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLA 442 (459)
Q Consensus 375 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e 442 (459)
.++++++.+.+.|+ +.| +.+..+++|+|+|+.+ +...+.+.++++||.+.||. ||+++. +++
T Consensus 280 ~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~ 353 (364)
T PRK07865 280 RYARRRAVLRPALE-AAG----FRVDHSEAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA-TDE 353 (364)
T ss_pred HHHHHHHHHHHHHH-HcC----CcccCCCccEEEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC-CHH
Confidence 99999999999999 876 5777889999999865 33333344455799998861 999987 789
Q ss_pred hHHHHHHHHH
Q 012628 443 KCEYLADAII 452 (459)
Q Consensus 443 ~i~~~~~~l~ 452 (459)
++++++++|+
T Consensus 354 ~~~~~~~~l~ 363 (364)
T PRK07865 354 RIAAAVERLA 363 (364)
T ss_pred HHHHHHHHhh
Confidence 9999999885
No 68
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.8e-44 Score=356.71 Aligned_cols=345 Identities=20% Similarity=0.251 Sum_probs=276.0
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHH-HhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccch
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENL-MLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGT 161 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt 161 (459)
++|||+.|.|......++ ++...+++.+ .........|++..|.++||+++|+++...++..++++ +|++ ++|++
T Consensus 2 ~~I~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~--~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPP-PPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV--TSGAQ 78 (363)
T ss_dssp TEEESSSSSTSSTTSSHH-HHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE--ESHHH
T ss_pred CEEEEECCCCCCcccccc-hHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE--ecccc
Confidence 689999999844434433 5666666655 33333358999999999999999999987778888888 9999 88888
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCC---CcEEEEeCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG---GSFILLHGCA 238 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~---~~~~ii~~~p 238 (459)
+++..+..++. ..+||+|++++|+|+.|...++..|++++.+|++.++++.+|++.|++.+++.+. +++++++++|
T Consensus 79 ~~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p 157 (363)
T PF00155_consen 79 AALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNP 157 (363)
T ss_dssp HHHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESS
T ss_pred cchhhhhhccc-ccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccc
Confidence 88888732221 4599999999999999999999999999999987678899999999999987321 3568888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
|||||.+++.+++++|+++|++||++||+||+|.++.+++. +..+....++...+++++.||||.||++|+|+||+++
T Consensus 158 ~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~ 235 (363)
T PF00155_consen 158 NNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP--DFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA 235 (363)
T ss_dssp BTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS--HTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE
T ss_pred ccccccccccccccchhhhhcccccceeeeeceeccccCCC--ccCcccccccccccceeeeeccccccccccccccccc
Confidence 99999999999999999999999999999999999998642 2333234445566799999999999999999999966
Q ss_pred EeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 012628 319 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 398 (459)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 398 (459)
+++..+.+.. ...... .+.+.|.++..++.+.... .+++++.+++++++++.+.+.|+ +.| +.
T Consensus 236 ---~~~~~~~l~~----~~~~~~--~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~~l~~~L~-~~~----~~ 298 (363)
T PF00155_consen 236 ---PPELIERLRR----FQRSGL--SSSPMQAAAAAALSDPELV---EKWLEELRERLRENRDLLREALE-EIG----IT 298 (363)
T ss_dssp ---EHHHHHHHHH----HHHHTT--SSHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH-HTT----SE
T ss_pred ---hhhhhhhhhh----cccccc--ccchhhHHHHHhhhccccc---ccccccchhhHHHHHHHHHHHHH-Hhh----hh
Confidence 7775544443 332222 2777888888887766533 23578999999999999999999 776 68
Q ss_pred cccCCcceeeecCCCH----HHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHH
Q 012628 399 FILRQIGMFSFTGLNK----AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAI 451 (459)
Q Consensus 399 ~~~~~~g~f~~~~l~~----~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l 451 (459)
+..+++|+|+|+.++. ++.++|++++||.+.||. ||+++..+++++++++++|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 299 VLPPEAGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EEHHSBSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred eeeccCccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 8888899999997753 567888887799999963 9999656999999999986
No 69
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-43 Score=348.58 Aligned_cols=333 Identities=16% Similarity=0.227 Sum_probs=255.4
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCCCCCcccHHHHHHHHHHHhcCC--CCccccCceEEeeccc
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGAD--NSVLKEQRVATVQGLS 159 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~l~~~~--~~~~~~~~i~~~~t~g 159 (459)
+..++|+.|+| ..++ ++.+.+++.+.+.... ...| |..|.++||++||+++...+ +..+++++|++ |+|
T Consensus 28 ~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~i--t~G 99 (374)
T PRK02610 28 IQLDRLDTNEF----PYDL-PPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISV--GNG 99 (374)
T ss_pred cceeEecCCCC----CCCC-CHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEE--cCC
Confidence 35889999988 4443 7899999988775432 2567 55799999999999987765 56788999999 999
Q ss_pred chhHHHHHHHHHHHhCCCC-EEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC-CCCcEEEEeCC
Q 012628 160 GTGSLRLAAALIERYFPGA-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLHGC 237 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd-~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~ii~~~ 237 (459)
+++++.++ +...+.+|| +|++++|+|..|...++.+|++++.+|++ ++++++|+++++++++.. ..+++++++++
T Consensus 100 a~~al~~~--~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~ 176 (374)
T PRK02610 100 SDELIRSL--LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176 (374)
T ss_pred hHHHHHHH--HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeC
Confidence 99999876 344466776 89999999999999999999999999984 446899999999988631 12678888899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEE
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (459)
||||||.+++.+++++|+++| ++++||+||+|.+|.+.. .+.. +...+++++++||||.||+||+|+||++
T Consensus 177 P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~------~~~~-~~~~~~~ivi~SfSK~~g~~GlRiG~~v 247 (374)
T PRK02610 177 PNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT------LVGE-LAQHPNWVILRTFSKAFRLAAHRVGYAI 247 (374)
T ss_pred CCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCccc------hHHH-HhcCCCEEEEEecchhccCcccceeeee
Confidence 999999999999999999987 499999999999986421 1222 2344678999999999999999999996
Q ss_pred EEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 012628 318 VVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 397 (459)
Q Consensus 318 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 397 (459)
+ ++++++.+ ..... .+ +.+.++|.++..+|++.+ .+++.+++.+++ ++.+.+.|+ +++ ++
T Consensus 248 ~---~~~l~~~l----~~~~~-~~-~~~~~~q~a~~~~l~~~~------~~~~~~~~~~~~-r~~l~~~L~-~~~---~~ 307 (374)
T PRK02610 248 G---HPELIAVL----EKVRL-PY-NLPSFSQLAAQLALEHRQ------ELLAAIPEILQE-RDRLYQALQ-ELP---QL 307 (374)
T ss_pred c---CHHHHHHH----HHhcC-CC-CCCHHHHHHHHHHhcCHH------HHHHHHHHHHHH-HHHHHHHHH-hCC---Cc
Confidence 5 77744444 33322 23 567889999988887642 223444555544 677888888 763 14
Q ss_pred ccccCCcceeeecCC----CHHHHHHHHhcccEEEcCCC---cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 398 SFILRQIGMFSFTGL----NKAQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 398 ~~~~~~~g~f~~~~l----~~~~~~~ll~~~gI~v~~gg---Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
.+ .|++|+|+|+.+ +.+.+...++++||.+.++. |||++. .+++++++++|+++++++
T Consensus 308 ~~-~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~~~lRls~~~--~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 308 RV-WPSAANFLYLRLSQDAALAALHQALKAQGTLVRHTGGGLRITIGT--PEENQRTLERLQAALTQL 372 (374)
T ss_pred Ee-CCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeCCCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence 54 478899999865 33333333455799998753 999985 567899999999998765
No 70
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-43 Score=323.19 Aligned_cols=347 Identities=17% Similarity=0.153 Sum_probs=290.4
Q ss_pred CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
++++++.+.+.+. +++. +|.|.+|+++.++.+. ++|+ .+.+++-+++++|...+++..+.++.|++ +.|.
T Consensus 23 g~~DvlPmWVADM----Df~~-pp~i~~Al~~rvdhGv-fGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~--~p~V 92 (388)
T COG1168 23 GNEDVLPMWVADM----DFPT-PPEIIEALRERVDHGV-FGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVF--VPGV 92 (388)
T ss_pred CCCCcceeeeecc----cCCC-CHHHHHHHHHHHhcCC-CCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEE--cCcc
Confidence 3579999999986 5664 8999999999998875 8885 67788999999999999999999999999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeee-cCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY-DPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
-.++.++.+. .-.|||.|++..|.|+++....+..|.+++..|+. +++.+.+|++.|++++.+ ++.+++++||||
T Consensus 93 Vpgi~~~I~~--~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~iLCnPH 168 (388)
T COG1168 93 VPGISLAIRA--LTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLFILCNPH 168 (388)
T ss_pred hHhHHHHHHH--hCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--CCccEEEEeCCC
Confidence 9999998332 24599999999999999999999999999999986 344577799999999987 467899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH-HhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
||||.+++++++++|+++|.+||+.||+||+++++.+.+. .+.+...+ ..-.++.+.+.|-||+|+++|+.++++
T Consensus 169 NP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~--~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~-- 244 (388)
T COG1168 169 NPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH--KHIPFASLSERFADNSITLTSASKTFNLAGLKCAYI-- 244 (388)
T ss_pred CCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC--CccchhhcChhhhcceEEEeeccccccchhhhheeE--
Confidence 9999999999999999999999999999999999998752 23232222 122368999999999999999999999
Q ss_pred EeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 012628 319 VCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 398 (459)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 398 (459)
+..++++.+++.+.+.. ....+++.++..+...+.+++ +.| +++..+.++.+++++.+.|. +. +|+ ++
T Consensus 245 Ii~n~~lr~~~~~~l~~---~~~~~~n~lg~~A~~aAY~~G---~~W---Ld~L~~yl~~N~~~~~~~l~-~~-~P~-v~ 312 (388)
T COG1168 245 IISNRELRAKFLKRLKR---NGLHGPSALGIIATEAAYNQG---EPW---LDELLEYLKDNRDYVADFLN-KH-LPG-VK 312 (388)
T ss_pred EecCHHHHHHHHHHHHH---hcCCCCchHHHHHHHHHHHhc---hHH---HHHHHHHHHHHHHHHHHHHH-hh-CCC-cE
Confidence 55777766777777665 334477888877777777665 235 67888999999999999999 64 222 78
Q ss_pred cccCCcceeeecCC-----CH-HHHHHHHhcccEEEcCC--------C--cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 399 FILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD--------G--RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 399 ~~~~~~g~f~~~~l-----~~-~~~~~ll~~~gI~v~~g--------g--Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+..|+|.|.+|+++ +. +..+.++++.+|.+.+| | |+++++ +.+-+++++++|+.++++.
T Consensus 313 v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 313 VTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKKR 387 (388)
T ss_pred EecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhcc
Confidence 99999999999854 54 66788999999999998 2 999999 9999999999999998865
No 71
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.4e-43 Score=348.73 Aligned_cols=323 Identities=15% Similarity=0.159 Sum_probs=255.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
..++|+|+.|++ .+++ ++.+++++.+.+.. . ..| |..|.++||+++++++. +++++|++ |+|++
T Consensus 28 ~~~~i~l~~nen----~~~~-~~~v~~a~~~~~~~-~-~~Y-p~~g~~~Lr~aia~~~~------~~~~~I~v--t~Gs~ 91 (366)
T PRK01533 28 DHSFVKLASNEN----PFGC-SPRVLDELQKSWLD-H-ALY-PDGGATTLRQTIANKLH------VKMEQVLC--GSGLD 91 (366)
T ss_pred CCceEEeCCCCC----CCCC-CHHHHHHHHHHHHh-c-CcC-CCCCHHHHHHHHHHHhC------CCcceEEE--CCCHH
Confidence 357899999987 4544 78899988876643 2 345 77899999999999973 34899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++. ...+.+||+|++++|+|..|...++..|++++.+|++ ++++|++.+++++++ +++++++|+||||
T Consensus 92 e~i~~~~--~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~---~~~~v~i~~P~NP 163 (366)
T PRK01533 92 EVIQIIS--RAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDN---DTKIVWICNPNNP 163 (366)
T ss_pred HHHHHHH--HHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCc---CCcEEEEeCCCCC
Confidence 9999984 3346799999999999999999999999999999983 357999999998875 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++|++++ ++|+||+|.++.+++ +..+.....+..+++++++||||.||++|+|+||+++
T Consensus 164 TG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~--- 236 (366)
T PRK01533 164 TGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAK---DFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG--- 236 (366)
T ss_pred CCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccc---cCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC---
Confidence 999999999999999998876 567799999887542 1112222334557899999999999999999999965
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++.+ .... ..+ +++.++|.++..+|++.++ +++.++.++++++++.+.++ .+| +++.+
T Consensus 237 ~~~~~~~l----~~~~-~~~-~~~~~~q~aa~~~l~~~~~-------~~~~~~~~~~~r~~~~~~l~-~~g----~~~~~ 298 (366)
T PRK01533 237 HEELIEKL----NVVR-LPF-NVSSLAQKAATIAFGDDEF-------IEEIVRVNTEGLRQYESFCK-ENE----IPFYQ 298 (366)
T ss_pred CHHHHHHH----HHhc-CCC-CcCHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHHHHHH-hCC----CccCC
Confidence 77854444 3332 223 7889999999999987544 35566777788888888888 776 56777
Q ss_pred CCcceeeecCC-CH-HHHHHHHhcccEEEcCCC---cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 402 RQIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 402 ~~~g~f~~~~l-~~-~~~~~ll~~~gI~v~~gg---Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
++ |.|+|+.+ +. ++.+.|++ +||.|++-. |||++ +.++++.++++|+++++.
T Consensus 299 ~~-~nf~~~~~~~~~~~~~~l~~-~GI~Vr~~~~~iRis~~--~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 299 SQ-TNFIFLPVENGGEIYEACAH-AGFIIRPFPNGVRITVG--TREQNEGVISVLQQHFEN 355 (366)
T ss_pred Cc-CcEEEEeCCCHHHHHHHHHH-CCcEEccCCCceEEeCC--CHHHHHHHHHHHHHHHHh
Confidence 76 55788776 33 44555554 799998753 99988 679999999999998864
No 72
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.2e-43 Score=347.38 Aligned_cols=338 Identities=19% Similarity=0.236 Sum_probs=269.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC--CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
.+++++|+.|.| ..++ ++.+.+++.+.+... ....|.+..|.+++|+++++++...++..+++++|++ |+|
T Consensus 32 ~~~~~~l~~g~p----~~~~-~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~G 104 (394)
T PRK06836 32 ADNVFDFSLGNP----SVPP-PAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVM--TCG 104 (394)
T ss_pred CCCeEEecCcCC----CCCC-CHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEE--eCC
Confidence 357899999987 3333 788999888877532 2377989999999999999999888888888999999 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
++++++++. ...+.+||.|++++|+|..|...++..|++++.+|++ ++++++|++++++++++ +++++++++||
T Consensus 105 ~~~al~~~~--~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~~~~---~~~~v~~~~p~ 178 (394)
T PRK06836 105 AAGALNVAL--KAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTD-TDTFQPDLDALEAAITP---KTKAVIINSPN 178 (394)
T ss_pred hHHHHHHHH--HHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecC-CccCcCCHHHHHhhcCc---CceEEEEeCCC
Confidence 999999983 3346799999999999999999999999999999985 34578999999999975 67888889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHh------cCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCc
Q 012628 240 NPTGIDPTPEQWEKIADVIQE------KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI 313 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~------~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri 313 (459)
||||.+++.+++++|+++|++ ||++||+||+|.++.+++. ....+ ....+++++++||||.||+||+|+
T Consensus 179 NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~---~~~~~~~i~~~S~SK~~~~pGlRi 253 (394)
T PRK06836 179 NPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA--EVPYI---FKYYDNSIVVYSFSKSLSLPGERI 253 (394)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC--CCCCh---HHccCcEEEEecchhhccCcceee
Confidence 999999999999999999999 8999999999999987531 11121 233468999999999999999999
Q ss_pred ceEEEEeCChhHHH--HHHHHHHhhccc-cccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012628 314 GAMNVVCSSSDLAA--RVKSQLKRLARP-MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 390 (459)
Q Consensus 314 G~~~~v~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 390 (459)
||+++ +++..+ .+...+....+. .+.+++.+.|.++..++++.. .++.++++++.+.+.|+ +
T Consensus 254 G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-----------~~~~~~~~r~~l~~~L~-~ 318 (394)
T PRK06836 254 GYIAV---NPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV-----------DVSIYKRNRDLLYDGLT-E 318 (394)
T ss_pred EEEec---CHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH-----------HHHHHHHHHHHHHHHHH-h
Confidence 99865 555322 122222222221 123677888999888887641 24677888999999999 8
Q ss_pred cCCCCCcccccCCcceeeecCC---CH-HHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 391 DKSGKDWSFILRQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 391 ~g~~~~~~~~~~~~g~f~~~~l---~~-~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
.| +.+..+++|+|+|+.+ +. ++++. ++++||.+.||. ||+++. +++++++++++|++++++.
T Consensus 319 ~g----~~~~~~~gg~~~~~~~~~~~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 319 LG----FECVKPQGAFYLFPKSPEEDDVAFCEK-AKKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKLAKEY 392 (394)
T ss_pred CC----CEeecCCceEEEEEeCCCCCHHHHHHH-HHhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 76 6778889999999854 33 44544 455799999982 999985 9999999999999999764
No 73
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2e-43 Score=354.96 Aligned_cols=339 Identities=12% Similarity=0.073 Sum_probs=249.9
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHH-HHhcCCCCc-cccC--ceEEeeccc
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAE-LLFGADNSV-LKEQ--RVATVQGLS 159 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~-~l~~~~~~~-~~~~--~i~~~~t~g 159 (459)
++|+|+.|+| ++++ ++.+ .++.+.+.. ..|++..|..++|+++++ ++....+.. ..++ +|++ |.|
T Consensus 95 ~~i~l~~g~p----~~~~-~~~~-~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~i--t~G 163 (521)
T TIGR03801 95 DIISYVIDQL----GFDP-DAFL-YEMCDGIIG---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFA--VEG 163 (521)
T ss_pred HHHhhcCCCC----CCCC-CHHH-HHHHHHhhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEE--eCC
Confidence 4799999999 6663 4444 555554422 358777788888888875 554443332 2333 8999 999
Q ss_pred chhHHHHHHHHHH---HhCCCCEEEEcCCCCcchHHHhhhC--CCCeeeeeeecCCC-----CCCCHHHHHHHHHcCCCC
Q 012628 160 GTGSLRLAAALIE---RYFPGAKVLISSPTWGNHKNIFNDA--RVPWSEYRYYDPKT-----VGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 160 gt~a~~l~~~~~~---~~~~gd~Vlv~~p~y~~~~~~~~~~--G~~v~~v~~~~~~~-----~~~d~e~l~~~i~~~~~~ 229 (459)
+++++..+...+. .+.|||+|++++|+|+.|...++.. |++++.++.+++++ |.+|++.+++++++ +
T Consensus 164 at~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~---~ 240 (521)
T TIGR03801 164 GTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP---S 240 (521)
T ss_pred HHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCC---C
Confidence 9999999743321 4679999999999999999987765 67777777753333 88999999987664 7
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~--~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
+++++++|||||||.+++.+++++|+++|++| +++||+||+|..|.+. ..++... ..+++++++||||.||
T Consensus 241 ~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-----~~sl~~~--~~~~vI~v~SfSK~fg 313 (521)
T TIGR03801 241 IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-----FRSLFAE--LPYNTIGVYSFSKYFG 313 (521)
T ss_pred CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-----ccchhhh--CCCCEEEEEcchhhcc
Confidence 88888899999999999999999999999986 9999999999998742 1232222 2358999999999999
Q ss_pred cCCCCcceEEEEeCChhHHHHHH--------------------------------HHHHhhccccccCCchHHHH--H--
Q 012628 308 LYAERIGAMNVVCSSSDLAARVK--------------------------------SQLKRLARPMYSNPPVHGAR--I-- 351 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~--~-- 351 (459)
++|||+||+++ .+....++++ .....++...+.+.+.+.|. +
T Consensus 314 ~~G~RlG~i~~--~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~ 391 (521)
T TIGR03801 314 ATGWRLGTIAL--HKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALF 391 (521)
T ss_pred Cchhhhhhhhc--CchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHH
Confidence 99999999954 3332222222 22233344444455665554 3
Q ss_pred -HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCC-----------------
Q 012628 352 -VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----------------- 413 (459)
Q Consensus 352 -~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~----------------- 413 (459)
+..++..+ .++++++++.++++++.+.+.|. - . +...+++|+||+|+++.
T Consensus 392 a~~all~~~------~~y~~~~~~~~~~R~~~l~~~Lg-~-~----~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~ 459 (521)
T TIGR03801 392 SLFALMDKE------NAYKAETKDICRRREKLLFRGLG-L-P----LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKK 459 (521)
T ss_pred HHHHHhccc------hhHHHHHHHHHHHHHHHHHHhcC-C-C----CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhc
Confidence 33445433 23467888999999999988874 2 1 24467899999998653
Q ss_pred ----HHHHHHHHhcccEEEcCCC---------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 414 ----KAQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 414 ----~~~~~~ll~~~gI~v~~gg---------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
.+++.+|++++||.+.||. |||++.+++++++++.++|++++++
T Consensus 460 ~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 460 NYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred cCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 2467789999999999983 9999988999999999999998875
No 74
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.4e-42 Score=341.56 Aligned_cols=332 Identities=14% Similarity=0.116 Sum_probs=254.3
Q ss_pred cchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCc-cc
Q 012628 70 ILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSV-LK 148 (459)
Q Consensus 70 i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~-~~ 148 (459)
+.+.....+. ...++++|+.|.| ..++ ++.+.+++.+... ...|++..|.++||+++++++...++.. ++
T Consensus 9 ~~~~~~~~~~-~~~~~i~l~~~~p----~~~~-~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~ 79 (357)
T TIGR03539 9 LAPYKAKAAS-HPDGIVDLSVGTP----VDPV-PPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLD 79 (357)
T ss_pred HHHHHHHhhh-CCCCeEEccCCCC----CCCC-CHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCC
Confidence 3334444433 3457899999987 3333 6778888877653 3679889999999999999998887886 88
Q ss_pred cCceEEeecccchhHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC
Q 012628 149 EQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 149 ~~~i~~~~t~ggt~a~~l~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~ 227 (459)
+++|++ |+|+++++.++. ... +.+||.|++++|+|+.|...++..|++++.++ |++.+. .
T Consensus 80 ~~~I~i--t~G~~~~i~~~~--~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~----~-- 140 (357)
T TIGR03539 80 PTAVLP--VIGTKELVAWLP--TLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD----P-- 140 (357)
T ss_pred cCeEEE--ccChHHHHHHHH--HHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC----c--
Confidence 999999 999999999873 223 46999999999999999999999999888763 222222 1
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH--HhcCCeEEEEEcCCcC
Q 012628 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATRGMELLVAQSYSKN 305 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~ 305 (459)
++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ....+... ....+++++++||||.
T Consensus 141 ~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~ 218 (357)
T TIGR03539 141 VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR--PVSILDPRVCGGDHTGLLAVHSLSKR 218 (357)
T ss_pred cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC--CccceecccCCCccccEEEEeccccc
Confidence 2677888899999999999999999999999999999999999998887531 11111000 0123579999999999
Q ss_pred cccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
|+++|+|+||+++ +++.++++.+ .......+++.++|.++..+|.+. +++++.++.++++++.+.+
T Consensus 219 ~~~~G~R~G~~i~---~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~ 284 (357)
T TIGR03539 219 SNLAGYRAGFVAG---DPALVAELLT----VRKHAGLMVPAPVQAAMVAALGDD-------GHVAEQKARYAARRAQLKP 284 (357)
T ss_pred cCCCceeEEEEec---CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHcCCH-------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999965 7785555443 222333467888899888888763 2356788899999999999
Q ss_pred HHhhccCCCCCcccccCCcceeeecCC--CHHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHH
Q 012628 386 SLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAI 451 (459)
Q Consensus 386 ~L~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l 451 (459)
.|+ +.| +.+..+++|+|+|+.+ +...+...++++||.+.||. |||++. +++++++++++|
T Consensus 285 ~L~-~~g----~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l 356 (357)
T TIGR03539 285 ALE-KAG----FRIDHSEAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL 356 (357)
T ss_pred HHH-HcC----CCCcCCCccEEEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence 999 776 5778889999999865 33333344456799999862 999998 788999998876
No 75
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-42 Score=340.18 Aligned_cols=328 Identities=16% Similarity=0.177 Sum_probs=258.4
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhc--CCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
..++|+.|+| .+++ ++.+.+++.+.+.. .....| |..|.++||+++|+++...+|..+++++|++ |+|++
T Consensus 27 ~~i~l~~~~~----~~~~-~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~i--t~G~~ 98 (368)
T PRK03317 27 VPVRLNTNEN----PYPP-SPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWA--ANGSN 98 (368)
T ss_pred ceeEecCCCC----CCCC-CHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEE--CCCHH
Confidence 5689999987 4443 88899999887643 123567 5578999999999999888888889999999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++. ...+.+||.|+++.|+|..|...++..|.+++.++. ++++++|+++++++++. .+++++++++||||
T Consensus 99 ~~l~~~~--~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NP 172 (368)
T PRK03317 99 EILQQLL--QAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAE--HRPDVVFLTSPNNP 172 (368)
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCC
Confidence 9999983 334679999999999999999999999999988887 44688999999999875 25567778999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++| ++++|+||+|.++.+.+. . +...+.+..+++++++||||.||++|+|+||+++
T Consensus 173 tG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~---~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~--- 242 (368)
T PRK03317 173 TGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT---P-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAA--- 242 (368)
T ss_pred CCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC---c-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhC---
Confidence 99999999999998877 699999999999876431 1 2222334456899999999999999999999865
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++.+ .... ..+ +.+.++|.++..+|++.+ .+.+.+++++++++.+.+.|+ +.| +.+..
T Consensus 243 ~~~~~~~l----~~~~-~~~-~~s~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~ 304 (368)
T PRK03317 243 APAVVDAL----RLVR-LPY-HLSAVTQAAARAALRHAD-------ELLASVAALRAERDRVVAWLR-ELG----LRVAP 304 (368)
T ss_pred CHHHHHHH----HhcC-CCC-CCCHHHHHHHHHHhhCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CEeCC
Confidence 88844444 3332 223 677888888888887532 123444667888999999999 876 57778
Q ss_pred CCcceeeecCC-CH-HHHHHHHhcccEEEcCCC-----cEEEccCChhhHHHHHHHHHHHHh
Q 012628 402 RQIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 402 ~~~g~f~~~~l-~~-~~~~~ll~~~gI~v~~gg-----Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
++++|++|..+ +. ++.+.|++ +||.+.+.+ ||+++ +.++++.++++|+++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~iRi~~~--~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 305 SDANFVLFGRFADRHAVWQGLLD-RGVLIRDVGIPGWLRVTIG--TPEENDAFLAALAEVLA 363 (368)
T ss_pred CCCcEEEEeccCCHHHHHHHHHH-CCEEEEeCCCCCeEEEecC--CHHHHHHHHHHHHHHHH
Confidence 88998888654 33 44555554 699998865 99987 66889999999998875
No 76
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.9e-42 Score=336.21 Aligned_cols=318 Identities=18% Similarity=0.201 Sum_probs=249.8
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+.++|+|+.|++ .+.+ +|.+.+++.+.+.. ...|+ ..|.++||+++++++. +++++|++ |+|++
T Consensus 29 ~~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~~------~~~~~I~i--t~G~~ 92 (357)
T PRK14809 29 PDDLVKLSSNEN----PHGP-SPAAVEAIREAAER--VHSYP-KASHADLTAALADRWD------VSPEQVWL--ANGGD 92 (357)
T ss_pred ccceeEecCCCC----CCCC-CHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHhC------CCcceEEE--CCCHH
Confidence 357999999987 4443 67888888877653 36784 5789999999999973 45899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
++++++. ...+.+||.|++++|+|..|....+..|++++.+|+..++++.+|++.+++.+. ++++++++|||||
T Consensus 93 ~al~~~~--~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~----~~k~i~l~~p~NP 166 (357)
T PRK14809 93 GALDYLA--RAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD----GERIVYLTSPHNP 166 (357)
T ss_pred HHHHHHH--HHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc----CCcEEEEeCCCCC
Confidence 9999983 334679999999999999999888899999999998654567788888777652 4567778999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|+++|++ +++||+||+|.++.+.+ . .+ ......+++++++||||.||++|+|+||+++
T Consensus 167 TG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~---~--~~-~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~--- 236 (357)
T PRK14809 167 TGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP---S--AV-ALVEERDDVAVLRTFSKAYGLAGLRLGYAVV--- 236 (357)
T ss_pred CCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc---h--hH-HHHhhCCCEEEEecchhHhcCcchhheeeec---
Confidence 9999999999999999975 78999999999998531 1 12 2234457899999999999999999999966
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++++. +.. . ..+++.++|.++..+|.+.+ ++++.++.++++++.+.+.|. ..+ .
T Consensus 237 ~~~~~~~~~----~~~-~-~~~~~~~~~~~a~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~~--------~ 294 (357)
T PRK14809 237 PEEWADAYA----RVN-T-PFAASELACRAGLAALDDDE-------HVERTVETARWAREYIREELD-APT--------W 294 (357)
T ss_pred CHHHHHHHH----HhC-C-CCCCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHhc-Ccc--------C
Confidence 777544443 332 2 23567888888888887643 356778888899999999887 542 2
Q ss_pred CCcceeeecCC-C-HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHHHh
Q 012628 402 RQIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 402 ~~~g~f~~~~l-~-~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
+.+|+|+|+.+ + .++.+.+ +++||.+.||. ||+++ +.+++++++++|+++++
T Consensus 295 ~~~g~f~~~~~~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 295 ESAGNFVLAEVGDASAVAEAA-QERGVIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred CCCCCEEEEECCCHHHHHHHH-HHCCEEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 46788999876 3 3445555 55799999973 99987 56899999999998875
No 77
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.3e-41 Score=334.14 Aligned_cols=323 Identities=18% Similarity=0.191 Sum_probs=252.9
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.++++|+.|.+ ..++ ++.+.+++.+.+.. ...| |..+.++||+++|+++. +++++|++ |+|+++
T Consensus 19 ~~~~~l~~~~~----~~~~-p~~~~~a~~~~~~~--~~~Y-~~~~~~~lr~~ia~~~~------~~~~~i~i--t~Ga~~ 82 (354)
T PRK06358 19 NMILDFSANIN----PLGV-PESLKQAITENLDK--LVEY-PDPDYLELRKRIASFEQ------LDLENVIL--GNGATE 82 (354)
T ss_pred cceEEecCCCC----CCCC-CHHHHHHHHHHHHh--hhcC-CCccHHHHHHHHHHHhC------CChhhEEE--CCCHHH
Confidence 45899999986 2332 78899988887643 3668 45578999999999973 45899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++.. .+.+ +.|++++|+|+.|...++..|++++.+|+++++++.+| +++++.+.. +++++++++|||||
T Consensus 83 ~l~~~~~---~~~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~---~~~~v~~~~P~NPt 154 (354)
T PRK06358 83 LIFNIVK---VTKP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE---EIDLVFLCNPNNPT 154 (354)
T ss_pred HHHHHHH---HhCC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc---CCCEEEEeCCCCCC
Confidence 9998733 3444 68999999999999999999999999999655567899 666666654 56777789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|+++|++|+++||+||+|.++.+++ ...+.....+..+++++++||||.||++|+|+||++ +++
T Consensus 155 G~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~---~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv--~~~ 229 (354)
T PRK06358 155 GQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN---ETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGL--TSN 229 (354)
T ss_pred CCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc---cchhHHHhccCCCCEEEEEechhhccCcchhheeee--cCC
Confidence 999999999999999999999999999999998753 122222233455789999999999999999999994 445
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
+...+. +..... .+ +.+.++|.++..+|++.. ++++.++.++++++.+.+.|+ +++ ++++..+
T Consensus 230 ~~~~~~----~~~~~~-~~-~~~~~~q~~~~~~l~~~~-------~~~~~~~~~~~~r~~l~~~L~-~~~---~~~~~~~ 292 (354)
T PRK06358 230 KNLAEK----LLQMRE-PW-SINTFADLAGQTLLDDKE-------YIKKTIQWIKEEKDFLYNGLS-EFK---GIKVYKP 292 (354)
T ss_pred HHHHHH----HHHhCC-CC-cchHHHHHHHHHHhccHH-------HHHHHHHHHHHHHHHHHHHHh-cCC---CcEEcCC
Confidence 663333 333332 23 678888999988887642 357788888999999999999 763 1566777
Q ss_pred CcceeeecCCC--HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHH
Q 012628 403 QIGMFSFTGLN--KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 403 ~~g~f~~~~l~--~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
+|+ |+|+.+. .++.++|++ +||.+.||. ||+++ +.++.++++++|++++
T Consensus 293 ~g~-f~~~~~~~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 293 SVN-FIFFKLEKPIDLRKELLK-KGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL 353 (354)
T ss_pred cce-EEEEEcCchHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 655 7888763 455667776 699999862 99987 6789999999998875
No 78
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.6e-41 Score=341.36 Aligned_cols=343 Identities=16% Similarity=0.111 Sum_probs=253.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC----CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
++++|+|+.|.| + ..+++.+.+.+++.+.+... ....|++..|.++||++||+++...+|..+++++|++ |
T Consensus 29 ~~~~i~l~~g~p-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~i--t 103 (416)
T PRK09440 29 TPGAIMLGGGNP-A--HIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIAL--T 103 (416)
T ss_pred CCCceeccCCCC-C--ccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEE--c
Confidence 467899999998 2 12222356777777766432 2257999999999999999999888888889999999 9
Q ss_pred ccchhHHHHHHHHHHHhC-----CCCEEEE-cCCCCcchHHHhhhCC----CCeeeeeeecCC-CCCCCHHHHHHHHHcC
Q 012628 158 LSGTGSLRLAAALIERYF-----PGAKVLI-SSPTWGNHKNIFNDAR----VPWSEYRYYDPK-TVGLDFEGMIADIKAA 226 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~-----~gd~Vlv-~~p~y~~~~~~~~~~G----~~v~~v~~~~~~-~~~~d~e~l~~~i~~~ 226 (459)
+|+++++.++..++ +. +||.|++ ++|+|+.|...+...| ..+..+++.+++ .+++|++.++ +.
T Consensus 104 ~Ga~~al~~~~~~l--~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-- 177 (416)
T PRK09440 104 NGSQSAFFYLFNLF--AGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-- 177 (416)
T ss_pred cChHHHHHHHHHHH--hccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC--
Confidence 99999999984433 43 5899999 7999999988655333 222333442221 4689999987 33
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc
Q 012628 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (459)
Q Consensus 227 ~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (459)
+++++++++|||||||.+++.+++++|+++|++||++||+||+|..+... . ....... ...+++++++||||.
T Consensus 178 -~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~--~~~~~~~--~~~~~vI~~~SfSK~- 250 (416)
T PRK09440 178 -EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-I--IFSEATP--LWNPNIILCMSLSKL- 250 (416)
T ss_pred -CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-c--chhhcCc--cccCCeEEEeccccc-
Confidence 36788889999999999999999999999999999999999999764321 0 0001100 114689999999996
Q ss_pred ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHH-HHHHHHHHHHHHHH
Q 012628 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM-MAGRIKNVRQKLFD 385 (459)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 385 (459)
++||+|+||+++ ++++++.+... ......+++.++|.++..+|+++++. +++.+ .++.|+++++.+.+
T Consensus 251 ~~pGlRiG~~i~---~~~l~~~~~~~----~~~~~~~~s~~~q~~~~~~l~~~~~~----~~~~~~~~~~~~~r~~~~~~ 319 (416)
T PRK09440 251 GLPGVRCGIVIA---DEEIIEALSNM----NGIISLAPGRLGPAIAAEMIESGDLL----RLSETVIRPFYRQKVQLAIA 319 (416)
T ss_pred CCCcceEEEEeC---CHHHHHHHHHH----HHHhccCCCcHHHHHHHHHhccchHH----HHHHHHHHHHHHHHHHHHHH
Confidence 899999999966 88855554433 22333467889999999999987654 33333 67888888888888
Q ss_pred HHhhcc-CCCCCcccccCCcceeeecCC-----CH-HHHHHHHhcccEEEcCC---------------C--cEEEccCCh
Q 012628 386 SLSAKD-KSGKDWSFILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD---------------G--RISLAGLSL 441 (459)
Q Consensus 386 ~L~~~~-g~~~~~~~~~~~~g~f~~~~l-----~~-~~~~~ll~~~gI~v~~g---------------g--Ris~~~~~~ 441 (459)
.|. +. +. .++.+..|+||+|+|+.+ +. ++++.+ +++||.+.|| + ||||+. ++
T Consensus 320 ~L~-~~l~~-~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~ 395 (416)
T PRK09440 320 LLR-RYLPD-EPCLIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DD 395 (416)
T ss_pred HHH-Hhccc-CCeEEecCCCceEEEEECCCCCCCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecC-CH
Confidence 887 53 10 114556889999999854 33 344554 5579999874 2 999987 89
Q ss_pred hhHHHHHHHHHHHHhh
Q 012628 442 AKCEYLADAIIDSYHN 457 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~ 457 (459)
+++++++++|++++++
T Consensus 396 ~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 396 EEIEKGIAILAEEVEK 411 (416)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999876
No 79
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.4e-41 Score=361.06 Aligned_cols=343 Identities=11% Similarity=0.086 Sum_probs=263.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCcccc-CceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~gg 160 (459)
++++|+|+.|+| ..++ |+.+++++.+.+... .+ ..|.+++|+++++++...+|+..++ ++|++ ++|+
T Consensus 696 g~~vI~LsinE~----d~pp-Pp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIv--t~Gs 763 (1082)
T PLN02672 696 ESSLIHMDVDES----FLPV-PSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVY--GDTS 763 (1082)
T ss_pred CCCEEEEeCCCC----CCCC-CHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEE--eCCH
Confidence 468999999998 4554 889999998876432 22 3456789999999998888888765 58888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC-
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH- 239 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~- 239 (459)
++++.++ +...+.|||+|++++|+|+.|...++..|++++.+|+++++++.+|++.+++++++. .+..++++|||
T Consensus 764 ~elL~ll--l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~--~~~~I~L~nPnh 839 (1082)
T PLN02672 764 LALFNKL--VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV--KKPWVYISGPTI 839 (1082)
T ss_pred HHHHHHH--HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC--CCCEEEEECcCC
Confidence 9999887 444467999999999999999999999999999999965568999999999998641 23456678896
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH---hc---CCeEEEEEcCCcCcccCCCCc
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA---TR---GMELLVAQSYSKNLGLYAERI 313 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~---~~---~~~~i~~~S~SK~~~~~G~Ri 313 (459)
||||.+++.+++++|+++|++||++||+||+|.++.+++.....+++...+ +. ..++++++||||.|+++|||+
T Consensus 840 NPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRI 919 (1082)
T PLN02672 840 NPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEF 919 (1082)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHh
Confidence 999999999999999999999999999999999988753211111121111 11 237999999999999999999
Q ss_pred ceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012628 314 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 390 (459)
Q Consensus 314 G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 390 (459)
||+++ +++++++.+... .. ...+....|.++ ..++.+. ...|.+++++.++.++++++++.+.|+ +
T Consensus 920 GylIa--p~~eLi~~l~~~----~~--~s~~~~~~q~Aaaaalall~~~--~~~~~~~l~e~r~~Lk~rRd~L~e~L~-~ 988 (1082)
T PLN02672 920 GFLAL--NDSVLIDAFHSA----PG--LSRPHSTLKYTIKKLLGLKNQK--SSDLLDGVAEQKKILKSRAERLKETLE-A 988 (1082)
T ss_pred eeEEe--CCHHHHHHHHHh----hh--hcCCCcHHHHHHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 99954 445555555432 11 112222233333 3223211 123567788999999999999999999 8
Q ss_pred cCCCCCcccccCCcceeeecCC---------------------C-HHHHHHHHhcccEEEcCCC--------cEEEccCC
Q 012628 391 DKSGKDWSFILRQIGMFSFTGL---------------------N-KAQSDNMTNKWHVYMTKDG--------RISLAGLS 440 (459)
Q Consensus 391 ~g~~~~~~~~~~~~g~f~~~~l---------------------~-~~~~~~ll~~~gI~v~~gg--------Ris~~~~~ 440 (459)
+| +++.+|+||||+|+.+ + .++.+.|+++.||.+.||. ||+|+. +
T Consensus 989 ~G----i~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~-~ 1063 (1082)
T PLN02672 989 CG----WDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL-E 1063 (1082)
T ss_pred CC----CeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-C
Confidence 86 6888999999999732 2 3467788888899999972 999997 8
Q ss_pred hhhHHHHHHHHHHHHh
Q 012628 441 LAKCEYLADAIIDSYH 456 (459)
Q Consensus 441 ~e~i~~~~~~l~~~~~ 456 (459)
++++++++++|++.++
T Consensus 1064 ~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1064 DSEFDRALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8899999999998765
No 80
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.2e-41 Score=333.91 Aligned_cols=317 Identities=18% Similarity=0.195 Sum_probs=249.4
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
++.++|+.|++ ..++ ++.+.+++.+.+.. ...|++. +.++||++|++++. +++++|++ |+|+++
T Consensus 43 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~~------v~~e~I~i--t~Gs~~ 106 (370)
T PRK09105 43 EGAVFLNANEC----PLGP-SPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQEG------LPADHVMA--YAGSSE 106 (370)
T ss_pred CCcEEecCCCC----CCCC-CHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHhC------cChhhEEE--cCChHH
Confidence 57899999987 4443 78899998887643 2457554 48999999999863 34899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++. ...+.+||+|++++|+|..|...++..|++++.+|++ .++.+|++.+++. .+ +++++++|||||||
T Consensus 107 ai~~~~--~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~-~~---~~~~v~l~nP~NPT 178 (370)
T PRK09105 107 PLNYAV--LAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLR--ADGAHDVKAMLAA-DP---NAGLIYICNPNNPT 178 (370)
T ss_pred HHHHHH--HHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCC--CCCCCCHHHHHhc-CC---CCCEEEEeCCCCCC
Confidence 999983 3346799999999999999999999999999999984 3578999999876 22 57788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|++.|+ +++++|+||+|.+|... . +...+.+..+++++++||||.||++|+|+||+++ +
T Consensus 179 G~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~---~---s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~---~ 248 (370)
T PRK09105 179 GTVTPRADIEWLLANKP-AGSVLLVDEAYIHFSDA---P---SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAA---R 248 (370)
T ss_pred CcCcCHHHHHHHHHhCC-CCcEEEEECchHHhccC---c---chHHHHhhCCCEEEEecccHhhcCCccceeeeec---C
Confidence 99999999999999764 69999999999887532 1 2223344567899999999999999999999966 7
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.++.+ ... . +.+++..+|.++...|.++++ +++.+++++++++.+.+.|+ ++| +++.++
T Consensus 249 ~~~i~~l----~~~--~-~~~~~~~~~~aa~~~L~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~~ 309 (370)
T PRK09105 249 PDLLAKL----ARF--G-HNPLPVPAAAAGLASLRDPKL-------VPQRRAENAAVREDTIAWLK-KKG----YKCTPS 309 (370)
T ss_pred HHHHHHH----Hhc--C-CCCcCHHHHHHHHHHHhCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CCcCCC
Confidence 7754443 332 1 235777888888888876432 56778889999999999999 876 577788
Q ss_pred CcceeeecCC--C-HHHHHHHHhcccEEEcCC-----C--cEEEccCChhhHHHHHHHHHHHHh
Q 012628 403 QIGMFSFTGL--N-KAQSDNMTNKWHVYMTKD-----G--RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 403 ~~g~f~~~~l--~-~~~~~~ll~~~gI~v~~g-----g--Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
+++||+ +.+ + .++.+.|+++ ||.+..+ + ||+++ +++++++++++|+++++
T Consensus 310 ~~~f~~-~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~Ris~~--~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 310 QANCFM-VDVKRPAKAVADAMAKQ-GVFIGRSWPIWPNWVRVTVG--SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred CCcEEE-EeCCCCHHHHHHHHHHC-CcEEecCCCCCCCeEEEEcC--CHHHHHHHHHHHHHHhh
Confidence 888775 443 3 3566777765 9998421 2 99998 57889999999988763
No 81
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-41 Score=326.59 Aligned_cols=321 Identities=18% Similarity=0.225 Sum_probs=260.7
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
+++++|+.+++ ..++ ++.+.+++.+.++. .+.| |.....++++++++++.. +++++|++ ++|+++
T Consensus 22 ~~~i~LssNen----P~gp-~~~~~~~~~~~~~~--~~rY-Pd~~~~~l~~a~a~~~~~-----~~~~~V~~--gnGsde 86 (356)
T COG0079 22 PGIIKLSSNEN----PYGP-PPKVIEAIRAALDK--LNRY-PDPDYRELRAALAEYYGV-----VDPENVLV--GNGSDE 86 (356)
T ss_pred ccceeecCCCC----CCCC-CHHHHHHHHHHHHh--hccC-CCCcHHHHHHHHHHHhCC-----CCcceEEE--cCChHH
Confidence 36899998875 3443 68888888887763 3678 555889999999999753 33789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
.+.++. ...+.+||+|+++.|+|..|...++.+|++++.+|.. + |.+|++.+.+.+.+ +++++++|||||||
T Consensus 87 ~i~~l~--~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~--~-~~~d~~~~~~~~~~---~~~lv~i~nPNNPT 158 (356)
T COG0079 87 LIELLV--RAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLK--E-FRLDLDAILAAIRD---KTKLVFLCNPNNPT 158 (356)
T ss_pred HHHHHH--HHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEeccc--c-cccCHHHHHHhhhc---CCCEEEEeCCCCCC
Confidence 999983 4346799999999999999999999999999999994 3 89999999999986 67899999999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|..++.++++++++.+.+ +.++|+||||.+|... +...++...+++++++||||.||++|+|+||+++ +
T Consensus 159 G~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~-------~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia---~ 227 (356)
T COG0079 159 GTLLPREELRALLEALPE-GGLVVIDEAYIEFSPE-------SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIA---N 227 (356)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCCc-------hhhhhccCCCCEEEEEecHHhhhcchhceeeccC---C
Confidence 999999999999999988 9999999999999852 2222333567899999999999999999999866 8
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++ +++.+.+... .| +.+.+++.++..+|.+.+ ++++.++++.+.|+++.+.|+ .+|+ ..+.++
T Consensus 228 ~~----~i~~l~~vr~-p~-~v~~~a~~aa~aal~~~~-------~~~~~~~~~~~~r~rl~~~l~-~~~~---~~v~pS 290 (356)
T COG0079 228 PE----LIAALNKVRP-PF-NVSSPALAAAIAALRDAD-------YLEESVERIREERERLYAALK-ALGL---FGVFPS 290 (356)
T ss_pred HH----HHHHHHHhcC-CC-CCCHHHHHHHHHHcccHH-------HHHHHHHHHHHHHHHHHHHHH-hCCC---CeecCC
Confidence 88 4555554432 24 788899999999888763 368899999999999999999 8862 125555
Q ss_pred CcceeeecCCC---H-HHHHHHHhcccEEEcCCC---------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 403 QIGMFSFTGLN---K-AQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 403 ~~g~f~~~~l~---~-~~~~~ll~~~gI~v~~gg---------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+ +.|+++... . ++.+.|++ +||.++..+ ||+++ ++|+.+.++++|+++++..
T Consensus 291 ~-aNFvlv~~~~~~~~~l~~~L~~-~giivR~~~~~~~~~~~lRitvg--t~een~~ll~AL~~~~~~~ 355 (356)
T COG0079 291 Q-ANFVLVRVPDAEAAALAEALLK-KGILVRDCSSVGLLPGYLRITVG--TPEENDRLLAALREVLKGL 355 (356)
T ss_pred C-CcEEEEECCCccHHHHHHHHHH-CCEEEEeCCCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHHhcc
Confidence 5 678887663 2 34566666 599998762 99998 6677799999999988653
No 82
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.6e-41 Score=330.16 Aligned_cols=335 Identities=14% Similarity=0.136 Sum_probs=252.9
Q ss_pred ccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccc
Q 012628 69 PILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK 148 (459)
Q Consensus 69 ~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~ 148 (459)
++.+....+.. ...++++|+.|++ ..++ |+.+++++.+.+.. ...|+ ..+.+++|+++|+++. ++
T Consensus 7 ~~~~~~~~~~~-~~~~~i~l~~~~~----~~~~-p~~~~~a~~~~~~~--~~~y~-~~~~~~lr~~ia~~~~------~~ 71 (356)
T PRK08056 7 NIREAATVLGI-SPDQLLDFSANIN----PLGM-PVSLKRAIIDNLDC--AERYP-DVEYRHLHQALARHHQ------VP 71 (356)
T ss_pred cHHHHHHHhCC-ChhhEEEeccccC----CCCC-CHHHHHHHHHHHHh--cccCc-CccHHHHHHHHHHHhC------cC
Confidence 34444444432 2357899999987 4443 78899998877653 24674 4578999999999973 34
Q ss_pred cCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCC
Q 012628 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (459)
Q Consensus 149 ~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~ 228 (459)
+++|++ |+|+++++.++.. .+.+|+ +++++|+|..|...++..|++++.+|+++++++.+| +++++.+.+
T Consensus 72 ~~~i~i--t~Ga~~~l~~~~~---~l~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~--- 141 (356)
T PRK08056 72 ASWILA--GNGETESIFAVVS---GLKPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTP--- 141 (356)
T ss_pred hhhEEE--CCCHHHHHHHHHH---HhCCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccC---
Confidence 899999 9999999998743 346776 788899999999999999999999998655556666 455555653
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCccc
Q 012628 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL 308 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 308 (459)
+++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++ .. .+ ..+...+++++++||||.||+
T Consensus 142 ~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~--~~-~~~~~~~~~i~~~S~SK~~~~ 216 (356)
T PRK08056 142 DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE--TG--FI-PQLADNPHLWVLRSLTKFYAI 216 (356)
T ss_pred CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc--hH--HH-HHhccCCCEEEEEechhhccC
Confidence 67788889999999999999999999999999999999999999987542 11 11 123345689999999999999
Q ss_pred CCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012628 309 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 388 (459)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 388 (459)
+|+|+||++ +++++.++.+ .... . ..+++.++|.++..++++..+ +++.++.++++++.+.+.|+
T Consensus 217 ~G~RiG~~v--~~~~~~~~~l----~~~~-~-~~~~~~~~~~~a~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~ 281 (356)
T PRK08056 217 PGLRLGYLV--NSDDAAVARM----RRQQ-M-PWSINAFAALAGEVILQDRAY-------QQATWQWLAEEGARFYQALC 281 (356)
T ss_pred cchhheeee--cCCHHHHHHH----HHhC-C-CCchhHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHHHHHh
Confidence 999999994 4455643333 3222 2 235677788888888876533 46778899999999999998
Q ss_pred hccCCCCCcccccCCcceeeecCCC---HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHH
Q 012628 389 AKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 389 ~~~g~~~~~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
+++ ++.+.++ +|+|+|+.+. .++++.|++ +||.+.+|. ||+++ +.++.+.++++|++++
T Consensus 282 -~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 282 -ALP---LLTVWPG-RANYLFLRCERPDIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNVL 353 (356)
T ss_pred -cCC---CcEEcCC-CCcEEEEEcCCChHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHHH
Confidence 873 1555555 5788888652 455667765 699998762 99987 5688999999999876
Q ss_pred h
Q 012628 456 H 456 (459)
Q Consensus 456 ~ 456 (459)
+
T Consensus 354 ~ 354 (356)
T PRK08056 354 T 354 (356)
T ss_pred c
Confidence 5
No 83
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-41 Score=332.10 Aligned_cols=319 Identities=15% Similarity=0.164 Sum_probs=253.2
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
+++++|+.|+| ...+ ++.+.+++.+.+.. ..|.|..|.+++|+++|+++. +++++|++ |+|+++
T Consensus 29 ~~~i~l~~n~~----~~~~-~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~~------~~~~~i~~--t~G~~~ 92 (359)
T PRK03158 29 EKIVKLASNEN----PYGP-SPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHLG------VDEEQLLF--GAGLDE 92 (359)
T ss_pred CceEEecCCCC----CCCC-CHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHhC------CCHHHEEE--CCCHHH
Confidence 47899999987 3333 77899998887653 456688899999999999973 23789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++.. ..+.+||+|++++|+|+.|...+...|++++.+|++ ++++|++.+++.+++ +++++++++|||||
T Consensus 93 ~l~~~~~--~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~---~~~~v~i~~p~NPt 164 (359)
T PRK03158 93 VIQMISR--ALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDE---QTKIVWICNPNNPT 164 (359)
T ss_pred HHHHHHH--HHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCC---CCCEEEEeCCCCCC
Confidence 9998733 336799999999999999999999999999999984 467999999988865 67788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|++.|+ +|++||+||+|.++.+++... ..+ ...+..+++++++||||.||++|+|+||+++ +
T Consensus 165 G~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~--~~~-~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~ 237 (359)
T PRK03158 165 GTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYP--DTL-PLLEKYENLIVLRTFSKAYGLAALRVGYGIA---S 237 (359)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccc--cHH-HHHHhcCCEEEEEechHhhcCcchhhehhcC---C
Confidence 99999999999998875 699999999999988653111 122 2334557899999999999999999999966 7
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.++.+ ..... .+ +++.++|.++..+|++.++ +++.++.++++++.+.+.|+ +.| +.+.++
T Consensus 238 ~~~~~~~----~~~~~-~~-~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~l~-~~~----~~~~~~ 299 (359)
T PRK03158 238 EELIEKL----NIARP-PF-NTTRIAQYAAIAALEDQAF-------LKECVEKNAEGLEQYYAFCK-EYG----LFYYPS 299 (359)
T ss_pred HHHHHHH----HHhcC-CC-CCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CeeCCC
Confidence 7755444 33322 23 6788999999999986543 45667778888999999998 776 455544
Q ss_pred CcceeeecCC--C-HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHH
Q 012628 403 QIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 403 ~~g~f~~~~l--~-~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
+|+|+|+.+ + .++++.|++ +||.+.||. ||+++ +.++++.++++|+++
T Consensus 300 -~g~~i~~~~~~~~~~~~~~l~~-~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 300 -QTNFIFVDTGRDANELFEALLK-KGYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred -cCcEEEEECCCCHHHHHHHHHH-CCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 578999865 2 355667765 699999972 99988 678999999999875
No 84
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-41 Score=332.55 Aligned_cols=316 Identities=19% Similarity=0.199 Sum_probs=246.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
.+++|+|+.|++ ..++ +|.+.+++.... ....| |..+.++||+++++++. +++++|++ |+|++
T Consensus 51 ~~~~i~l~~n~~----p~~~-~~~v~~a~~~~~---~~~~Y-p~~~~~~lr~~ia~~~~------~~~~~I~~--t~Ga~ 113 (380)
T PLN03026 51 PEDIVKLDANEN----PYGP-PPEVLEALGNMK---FPYVY-PDPESRRLRAALAEDSG------LESENILV--GCGAD 113 (380)
T ss_pred ccceEEccCCCC----CCCC-CHHHHHHHHhhH---hhccC-CCCCHHHHHHHHHHHhC------cChhhEEE--cCCHH
Confidence 458999999986 3333 677888876532 12456 55678999999999974 34789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++. ...+.+||+|++++|+|..|...++..|++++.+|.+ +++.+|++.+++++.. ++++++++++||||
T Consensus 114 ~~i~~~~--~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~--~~~~~v~l~~P~NP 187 (380)
T PLN03026 114 ELIDLLM--RCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVET--HKPKLLFLTSPNNP 187 (380)
T ss_pred HHHHHHH--HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhc--cCCcEEEEeCCCCC
Confidence 9999983 3346799999999999999999999999999999983 4678999999999843 26788888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|++.+ ++||+||+|.+|.+.+ . .+ ......+++++++||||.||++|+|+||+++
T Consensus 188 TG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~---~--~~-~~~~~~~~viv~~SfSK~~glaGlRiGy~~~--- 254 (380)
T PLN03026 188 DGSIISDDDLLKILELP----ILVVLDEAYIEFSTQE---S--RM-KWVKKYDNLIVLRTFSKRAGLAGLRVGYGAF--- 254 (380)
T ss_pred CCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCc---c--hH-HHHHhCCCEEEEecchHhhcCccccceeeec---
Confidence 99999999999988753 8999999999987532 1 11 2334567899999999999999999999966
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++. +...... + +.+.++|.++..+|++.++ +++.++.++++++++.+.|+ +++. +. ..
T Consensus 255 ~~~~i~~----l~~~~~~-~-~~~~~~q~aa~~aL~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~~~---~~-~~ 316 (380)
T PLN03026 255 PLSIIEY----LWRAKQP-Y-NVSVAAEVAACAALSNPKY-------LEDVKNALVEERERLFGLLK-EVPF---LE-PY 316 (380)
T ss_pred CHHHHHH----HHHhcCC-C-CCCHHHHHHHHHHhhCHHH-------HHHHHHHHHHHHHHHHHHHH-HCCC---Ce-EC
Confidence 7774444 4333322 3 5778889998888876533 56788899999999999999 8752 23 35
Q ss_pred CCcceeeecCCC-----HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHH
Q 012628 402 RQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 402 ~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
+.+++|+|+.+. .++.+.|+ ++||.++++. |||++ +.+++++++++|+++
T Consensus 317 p~~~~f~~~~~~~~~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 317 PSDANFILCRVTSGRDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 677888887552 34566666 4699998752 99998 567889999988754
No 85
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5e-41 Score=330.86 Aligned_cols=320 Identities=19% Similarity=0.164 Sum_probs=249.7
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.++|+|+.|++ .+++ ++.+++++.+.+.......|++ .|.++||+++|+++.... .++|++ |+|+++
T Consensus 26 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~~-----~~~I~~--t~G~~~ 92 (356)
T PRK04870 26 TGMVKLDAMEN----PYRL-PAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGVPA-----GADVLL--GNGSDE 92 (356)
T ss_pred CCceeCcCCCC----CCCC-CHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCcCC-----CCcEEE--cCCHHH
Confidence 47999999987 4544 8999999998875433467865 688999999999974321 257988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++.. ..+.+||+|++++|+|..|...++..|++++.+|++ +++++|++.+++++.. .+++++++++|||||
T Consensus 93 ~i~~~~~--~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~--~~~~~v~l~~p~NPt 166 (356)
T PRK04870 93 LIQLLAL--ACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAE--HRPALVFLAYPNNPT 166 (356)
T ss_pred HHHHHHH--HhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhc--CCCCEEEEcCCCCCC
Confidence 9999843 336799999999999999999999999999999984 4588999999999874 266788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|+++| ++++|+||+|.++.+.. . . ......+++++++|||| ++++|+|+||+++ +
T Consensus 167 G~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~----~--~-~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~---~ 232 (356)
T PRK04870 167 GNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS----W--L-PRLARFPNLLVMRTVSK-LGLAGLRLGYLAG---H 232 (356)
T ss_pred CCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc----h--H-HHHhhCCCEEEEecchh-hhhHHHhhhhhhC---C
Confidence 9999999999999998 77899999999886431 1 1 12344568999999999 8999999999966 7
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.++. +.... ..+ +.+.++|.++..++++.+ .+++.+++++++++.+.+.|+ +++ ++.+. +
T Consensus 233 ~~~i~~----~~~~~-~~~-~~~~~~q~~a~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~---~~~~~-~ 294 (356)
T PRK04870 233 PAWIAE----LDKVR-PPY-NVNVLTQATALFALEHVD-------VLDAQAAQLRAERTRLAAALA-ALP---GVTVF-P 294 (356)
T ss_pred HHHHHH----HHHcc-CCC-cCCHHHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHH-hCC---CcEEC-C
Confidence 774444 33332 223 567788888877776532 256778888999999999998 762 15544 5
Q ss_pred CcceeeecCCC-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHH
Q 012628 403 QIGMFSFTGLN-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 403 ~~g~f~~~~l~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
.+|+|+|+.++ .+.+..+++++||.+.++. |||++ +.++++.++++|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 295 SAANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAAL 356 (356)
T ss_pred CCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHhC
Confidence 56778888773 4444455566799998762 99998 5788999999998763
No 86
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6e-41 Score=331.77 Aligned_cols=324 Identities=18% Similarity=0.209 Sum_probs=251.8
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
.+++|+|+.|+| ...+ ++.+.+++.+.... ..+|++..| .+||+++++++. +++++|++ |+|++
T Consensus 35 ~~~~i~l~~~~~----~~~~-~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~~------~~~~~i~~--t~G~~ 98 (371)
T PRK05166 35 VPRIAKLGSNEN----PLGP-SPAVRRAFADIAEL--LRLYPDPQG-RALREAIAARTG------VPADRIIL--GNGSE 98 (371)
T ss_pred CcceEEcCCCCC----CCCC-CHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHhC------cCHHHEEE--cCCHH
Confidence 457999999987 2322 67888888775533 367988888 499999999963 23789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++.. ..+.+||+|+++.|+|..+...++..|++++.+|++ .++++|++++++.+++ ++++++++|||||
T Consensus 99 ~~l~~~~~--~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~---~~~~v~l~~p~NP 171 (371)
T PRK05166 99 DLIAVICR--AVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVT--PDLGFDLDALCAAVAR---APRMLMFSNPSNP 171 (371)
T ss_pred HHHHHHHH--HhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHhhhc---CCCEEEEeCCCCC
Confidence 99998743 336799999999999999999999999999999984 3578999999998876 5677888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH-hcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA-TRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
||.+++.+++++|+++|++ +++||+||+|.++.+++ ...+..... ...+++++++||||.||++|+|+||+ ++
T Consensus 172 tG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~--i~ 245 (371)
T PRK05166 172 VGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGD---DYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYG--LV 245 (371)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCc---CcccHHHHHhhcCCCEEEEeechHhhhcchhheeee--ec
Confidence 9999999999999999874 88999999999998542 112222222 23457999999999999999999998 34
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
++++..+.+ .... . ..+++.++|.++...|.+.++ +++.++.++++++.+.+.|+ +.| +.+
T Consensus 246 ~~~~l~~~~----~~~~-~-~~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~g----~~~- 306 (371)
T PRK05166 246 SDPELVGLL----DRVR-T-PFNVNGAAQAAALAALDDEEH-------LAKGVALALAERERLKKELA-EMG----YRI- 306 (371)
T ss_pred CCHHHHHHH----HHhc-c-CCCCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCc----Cee-
Confidence 567744443 3322 2 236788888888777776432 56777888999999999999 876 454
Q ss_pred cCCcceeeecCC--C-HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHHHh
Q 012628 401 LRQIGMFSFTGL--N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 401 ~~~~g~f~~~~l--~-~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
.+.+|+|+|+.+ + .++.+.|++ +||.+.||. ||+++ +.++.++++++|+.++.
T Consensus 307 ~p~~g~fl~~~~~~~~~~l~~~l~~-~gi~v~p~~~~~~~~~iRi~~~--~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 307 APSRANFLFFDARRPASAVAEALLR-QGVIVKPWKQPGFETFIRVSIG--SPEENDHFVAALDKVLE 370 (371)
T ss_pred CCCcCCEEEEeCCCCHHHHHHHHHH-CCeEEecCCCCCCCCeEEEEcC--CHHHHHHHHHHHHHHhh
Confidence 455688999875 2 455667776 599999872 99998 45678888888877653
No 87
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-41 Score=329.82 Aligned_cols=316 Identities=17% Similarity=0.187 Sum_probs=245.4
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.++|+|+.|++ ..++ ++.+.+++.+.+.... ..|+ ..|.++||++||+++. +++++|++ |+|+++
T Consensus 24 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~~~-~~y~-~~~~~~lr~aia~~~~------~~~~~I~i--t~G~~~ 88 (353)
T PRK05387 24 AKLIKLNTNEN----PYPP-SPKVLEAIRAALGDDL-RLYP-DPNADALRQAIAAYYG------LDPEQVFV--GNGSDE 88 (353)
T ss_pred cceeeccCCCC----CCCC-CHHHHHHHHHHhhhhh-hcCC-CCcHHHHHHHHHHHhC------CCHHHEEE--cCCHHH
Confidence 47899999997 4444 7889999988775433 6784 4577999999999974 34899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++. ...+.+||+|++++|+|+.|...++..|++++.+|++ +++++|++++++ .+++++++||||||
T Consensus 89 al~~~~--~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~-------~~~~v~~~~P~NPt 157 (353)
T PRK05387 89 VLAHAF--LAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR-------PNGGIIFPNPNAPT 157 (353)
T ss_pred HHHHHH--HHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh-------cCCEEEEeCCCCCC
Confidence 999984 3447899999999999999999999999999999983 467899998863 23467789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|++.++ ++++|+||+|.++... .. . .+.+..+++++++||||.||++|+|+||+++ +
T Consensus 158 G~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~~----~~--~-~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~---~ 225 (353)
T PRK05387 158 GIALPLAEIERILAANP--DSVVVIDEAYVDFGGE----SA--I-PLIDRYPNLLVVQTFSKSRSLAGLRVGFAIG---H 225 (353)
T ss_pred CCCCCHHHHHHHHHhCC--CcEEEEeCcccccCCc----ch--H-HHHhhCCCEEEEEehhHhhcchhhhceeeec---C
Confidence 99999999999988653 9999999999877421 11 1 2334457899999999999999999999965 7
Q ss_pred hhHHHHHHHHHHhhcccc-ccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 323 SDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
++..+.+.. ..... ..+++.++|.++..+|.+.++ +++.+++++++++.+.+.|+ ++| +.+.
T Consensus 226 ~~~~~~l~~----~~~~~~~~~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L~-~~g----~~~~- 288 (353)
T PRK05387 226 PELIEALNR----VKNSFNSYPLDRLAQAGAIAAIEDEAY-------FEETRAKVIATRERLVEELE-ALG----FEVL- 288 (353)
T ss_pred HHHHHHHHH----hhccCCCCCcCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CeEC-
Confidence 775544433 22221 225678888888888876533 45678888999999999999 876 4544
Q ss_pred CCcceeeecCC---CH-HHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHHHh
Q 012628 402 RQIGMFSFTGL---NK-AQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 402 ~~~g~f~~~~l---~~-~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
+.+++|+|+.+ +. ++.+.|.+ +||.+.+.+ ||+++ +++++++++++|++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~~-~gi~v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 289 PSKANFVFARHPSHDAAELAAKLRE-RGIIVRHFNKPRIDQFLRITIG--TDEEMEALVDALKEILA 352 (353)
T ss_pred CCcCcEEEEECCCCCHHHHHHHHHH-CCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence 55677888765 33 45666654 699985431 99997 56899999999998865
No 88
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.5e-41 Score=330.18 Aligned_cols=323 Identities=13% Similarity=0.119 Sum_probs=252.7
Q ss_pred CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+....++|+.|++ +.++ ++.+.+++.+.... ...|++. +.++||++||+++. +++++|++ |+|+
T Consensus 30 g~~~~~~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~~------~~~~~I~i--t~G~ 93 (369)
T PRK08153 30 GRPFRARIGANES----GFGP-SPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHHG------VAPENIMV--GEGI 93 (369)
T ss_pred CCcceeEecCCCC----CCCC-CHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHhC------CCHHHEEE--cCCH
Confidence 3445679999987 5554 78899988877643 2568655 57999999999973 34789999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++.. ..+.+||.|++++|+|+.|...++..|++++.+|+++ ..+|++.+++.+.. .+++++++++|||
T Consensus 94 ~~~l~~~~~--~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~--~~~~~i~l~~P~N 166 (369)
T PRK08153 94 DGLLGLIVR--LYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARR--ENAPLVYLANPDN 166 (369)
T ss_pred HHHHHHHHH--HhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcc--cCCcEEEEeCCCC
Confidence 999999833 3367999999999999999998999999999999842 35899999887754 3667888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|+ ++++||+||+|.++.+++ ...+ +....+++++++||||.||++|+|+||+++
T Consensus 167 PtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~---~~~~---~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~-- 237 (369)
T PRK08153 167 PMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG---AAPP---IDTDDPNVIRMRTFSKAYGLAGARVGYAIG-- 237 (369)
T ss_pred CCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc---cchh---hhhcCCCEEEEecchHhccCcchheeeeec--
Confidence 9999999999999999987 499999999999998643 1222 223456899999999999999999999966
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
+++.++.+. ..... .+++.++|.++..+|+++++ +++.++.++++++.+.+.|+ +.| +...
T Consensus 238 -~~~~~~~l~----~~~~~--~~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~~~~~L~-~~g----~~~~ 298 (369)
T PRK08153 238 -APGTIKAFD----KVRNH--FGMNRIAQAAALAALKDQAY-------LAEVVGKIAAARDRIAAIAR-ANG----LTPL 298 (369)
T ss_pred -CHHHHHHHH----HhhcC--CCCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CccC
Confidence 777554443 33222 36788899999888876533 56778899999999999999 877 4433
Q ss_pred cCCcceeeecCCC------HHHHHHHHhcccEEEc-CC-----C--cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 401 LRQIGMFSFTGLN------KAQSDNMTNKWHVYMT-KD-----G--RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 401 ~~~~g~f~~~~l~------~~~~~~ll~~~gI~v~-~g-----g--Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+.+++|+|+.+. .++.++|++ +||.+. |+ + ||+++ ++++++.++++|++++...
T Consensus 299 -p~~~~f~~~~~~~~~~~a~~l~~~l~~-~Gi~v~~p~~~~~~~~iRis~~--~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 299 -PSATNFVAIDCGRDGAFARAVLDGLIA-RDIFVRMPGVAPLDRCIRVSCG--PDEELDLFAEALPEALEAA 366 (369)
T ss_pred -CCcCcEEEEECCCCcccHHHHHHHHHH-CCeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 667889997652 233455555 699995 43 2 99988 6899999999999988653
No 89
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=308.64 Aligned_cols=316 Identities=16% Similarity=0.196 Sum_probs=266.9
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCC--CccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-h
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D 196 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~--~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~ 196 (459)
..|.+-.|.+.+|+++|+++....+ +.++|+++++ +.|+|++++.+.-+ +.+|||..+||.|.|+++..-++ .
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv--~~G~T~ane~l~fc--LadpgdafLvPtPyY~gfdrdl~~r 190 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVV--TNGATSANETLMFC--LADPGDAFLVPTPYYPGFDRDLRWR 190 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEE--ecccchhhHHHHHH--hcCCCceeeecCCCCCcccccceec
Confidence 5677889999999999999876544 4678999999 99999999998433 36799999999999999977766 6
Q ss_pred CCCCeeeeeeecCCCCCCCHHHHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC
Q 012628 197 ARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (459)
Q Consensus 197 ~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~ 273 (459)
.|+++++|.+...++++++.+++|+++.++ ..+.+-+++.||+||.|++++++++..++++|.++++.+|+||+|.+
T Consensus 191 Tgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~ 270 (471)
T KOG0256|consen 191 TGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAG 270 (471)
T ss_pred cCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcc
Confidence 799999999988889999999999998762 34677888999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHh----cCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHH
Q 012628 274 FASGSLDNDASSVRLFAT----RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 349 (459)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (459)
-.++.. ...++..... ..+++.++.|+||.+|+||+|+|.++ +.++. +.+...+. ..+...+...|
T Consensus 271 sVF~~~--~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviY--S~ne~----VvsaA~km--ssf~~vSs~tQ 340 (471)
T KOG0256|consen 271 SVFDKS--EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIY--SNNED----VVSAATKM--SSFGLVSSQTQ 340 (471)
T ss_pred cccCcc--CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEE--ecChH----HHHHHHHH--hhccCCcHHHH
Confidence 998752 4445544433 23589999999999999999999994 45666 55554444 33557889999
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC-------C----HHHHH
Q 012628 350 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------N----KAQSD 418 (459)
Q Consensus 350 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l-------~----~~~~~ 418 (459)
..++.+|+|..+. ++++++.+++++.+.+++.+.|+ ++| +.+...++|+|+|+++ + -++++
T Consensus 341 ~~la~LLSD~~f~---~~yl~en~~Rl~~rh~~~~~gLk-~lg----I~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~ 412 (471)
T KOG0256|consen 341 YLLASLLSDEEFT---REYLRENNKRLRIRHRYIVEGLK-ALG----IPCLKSNAGLFCWVDLRKLLTSLTFEGELELWE 412 (471)
T ss_pred HHHHHHhchHHHH---HHHHHHHHHHHHHHHHHHHhhHH-hcC----CceeecCCeeEEEEEhHHhcCcCChHHHHHHHH
Confidence 9999999997776 56689999999999999999999 998 5899999999999975 1 24578
Q ss_pred HHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 419 NMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 419 ~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
+++++.++.+.||. |++|++..++.++.++++|++++.+
T Consensus 413 ~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 413 RILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred HHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 89988899999993 9999997777777799999998764
No 90
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-40 Score=327.07 Aligned_cols=332 Identities=16% Similarity=0.187 Sum_probs=256.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
..++|+|+.|.+ ..++ ++.+.+++.+.+.......|.+..|.+++|+++++++.. ++++|++ |+|++
T Consensus 27 ~~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~------~~~~v~~--~~g~t 93 (380)
T PRK06225 27 DKEMIWMGQNTN----HLGP-HEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGL------DDDEALI--TAGAT 93 (380)
T ss_pred cCCeEEccCCCC----CCCC-CHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCC------CCCcEEE--eCCHH
Confidence 357999999876 4443 788999999888654446798889999999999999742 3788999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeec-CCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++++.. ..+.+||+|++++|+|..+...++..|++++++|++. ++++.+|++.+++.+++ +++++++++|||
T Consensus 94 ~al~~~~~--~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p~N 168 (380)
T PRK06225 94 ESLYLVMR--AFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE---NTRLIYLIDPLN 168 (380)
T ss_pred HHHHHHHH--HhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC---CceEEEEeCCCC
Confidence 99999843 3467999999999999999999999999999999742 33578999999998875 677888889999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++++|+++|++||+++|+||+|.++..+. . ....+ ..++++++.||||.+|++|+|+||+++
T Consensus 169 ptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~----~-~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~-- 239 (380)
T PRK06225 169 PLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH----T-LAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVA-- 239 (380)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC----C-chhhc--CCCCEEEEeechhhcCCccceeEEEec--
Confidence 99999999999999999999999999999998876431 1 11111 235789999999999999999999966
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSF 399 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~ 399 (459)
+++.++.+... ... ..+.+.++|.++...|... .+++++.++.++++++.+.+.|+ ++ |. .+.
T Consensus 240 -~~~l~~~~~~~----~~~-~~~~~~~~~~~a~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~~--~~~- 303 (380)
T PRK06225 240 -TPDLIEVVKSI----VIN-DLGTNVIAQEAAIAGLKVK------DEWIDRIRRTTFKNQKLIKEAVD-EIEGV--FLP- 303 (380)
T ss_pred -CHHHHHHHHHH----Hhc-ccCCCHHHHHHHHHHHhcc------hHHHHHHHHHHHHHHHHHHHHHH-hCcCC--ccc-
Confidence 77755554332 222 2356778888877777542 12346667778888888888998 75 31 112
Q ss_pred ccCCcceeeecCC-----CH-HHHHHHHhcccEEEcCC-------C----cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 400 ILRQIGMFSFTGL-----NK-AQSDNMTNKWHVYMTKD-------G----RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 400 ~~~~~g~f~~~~l-----~~-~~~~~ll~~~gI~v~~g-------g----Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
..+.+|+|+|+.+ +. ++.+.|. ++||.+.|| | |+|++. ++|++++++++|+++++++
T Consensus 304 ~~~~~g~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 304 VYPSHGNMMVIDISEAGIDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETL 377 (380)
T ss_pred cCCCCCeEEEEEcccccCCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHh
Confidence 2345566777643 33 4455665 569999886 2 999987 8899999999999999875
No 91
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=3e-40 Score=325.64 Aligned_cols=321 Identities=14% Similarity=0.104 Sum_probs=240.7
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.++|+|+.|++ ..++ ++.+.+++.+.+.. ...|++. +.++||++||+++. +++++|++ |+|+++
T Consensus 22 ~~~i~l~~~~n----~~~~-~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~~------v~~~~I~i--t~G~~~ 85 (360)
T PRK07392 22 DAILDFSASIN----PLGP-PESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHHQ------LPPEWILP--GNGAAE 85 (360)
T ss_pred ccEEEeCCcCC----CCCC-CHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHhC------cChhhEEE--CCCHHH
Confidence 46899999876 3443 78888888877653 3678654 56899999999972 45899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCC---CCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTV---GLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~---~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
++.++. ..+.+||.|++++|+|..|...++.+|++++.+|+++++++ ..|++.+++.. +++++++++|||
T Consensus 86 ~i~~~~---~~l~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~nP~ 158 (360)
T PRK07392 86 LLTWAG---RELAQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL----TPNDGLLLNNPH 158 (360)
T ss_pred HHHHHH---HHhCCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc----cCCCEEEEeCCC
Confidence 999873 23567899999999999999999999999999999644333 24566665432 256788889999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (459)
||||.+++++++.++ ++++++ +|+||+|.++.+++. ..+.....+..+++++++||||.||++|+|+||+++
T Consensus 159 NPTG~~~~~~~l~~l---~~~~~~-~IiDE~y~~~~~~~~---~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~- 230 (360)
T PRK07392 159 NPTGKLWSREAILPL---LEQFAL-VVVDEAFMDFLPPDA---EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA- 230 (360)
T ss_pred CCCCCCcCHHHHHHH---HHHCCE-EEEECchhhhccCcc---ccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC-
Confidence 999999997765554 567775 666999999986531 122222344557899999999999999999999965
Q ss_pred eCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc
Q 012628 320 CSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 399 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 399 (459)
+++.++.+ .... . ..+++.++|.++..+|+++.+ .+..++.++++++.+.+.|+ +++ ++.+
T Consensus 231 --~~~~~~~~----~~~~-~-~~~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~~---~~~~ 291 (360)
T PRK07392 231 --HPDRLQRW----QQWR-D-PWPVNGLAAAAAIAALADRDF-------QQQTWAWLPPAREALFQGLA-SLP---GLTP 291 (360)
T ss_pred --CHHHHHHH----HhhC-C-CCCCCHHHHHHHHHHhccHHH-------HHHHHHHHHHHHHHHHHHHH-hCC---CcEE
Confidence 77744443 3322 2 236788999999999987544 24556678889999999998 763 1454
Q ss_pred ccCCcceeeecCCC---HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHh
Q 012628 400 ILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 400 ~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
. +.+++|+|+.+. .++.+.+++++||.+.||. ||+++. .++.+++.++|.+++.
T Consensus 292 ~-~~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 292 L-PSAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAILA 358 (360)
T ss_pred C-CCCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHhh
Confidence 4 477899998652 3556777777899999872 999985 4556777777776654
No 92
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-39 Score=315.93 Aligned_cols=311 Identities=14% Similarity=0.122 Sum_probs=233.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+.++|+|+.|++ .+++ ++.+.+++.+.+..+....|+ ..|.++||+++++++... + +++++|++ |+|++
T Consensus 18 ~~~~i~l~~~~~----~~~~-p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr~aia~~~~~~-~--~~~~~i~i--t~Ga~ 86 (335)
T PRK14808 18 KRDRTYLALNEN----PFPF-PEDLVDEVFRRLNSDTLRIYY-DSPDEELIEKILSYLDTD-F--LSKNNVSV--GNGAD 86 (335)
T ss_pred CCceeEecCCCC----CCCC-CHHHHHHHHHHhhhhhhhcCC-CCChHHHHHHHHHHhCCC-C--CCcceEEE--cCCHH
Confidence 358999999987 4554 888999988876543324464 458999999999998654 2 56899999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++.. .+ |.|++++|+|..|...++.+|++++.+|+++ ++.++... +. .+++++++|||||
T Consensus 87 ~~i~~~~~---~~---d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~~----~~~~i~i~nP~NP 150 (335)
T PRK14808 87 EIIYVMML---MF---DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----VG----EGDVVFIPNPNNP 150 (335)
T ss_pred HHHHHHHH---Hh---CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----cc----CCCEEEEeCCCCC
Confidence 99999833 23 7899999999999999999999999999842 34444321 22 4568888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++++++++|+ +++++||+||+|.+|... ... ..+...+++++++||||.||++|+|+||+++
T Consensus 151 TG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~~----~~~---~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~--- 216 (335)
T PRK14808 151 TGHVFEREEIERIL----KTGAFVALDEAYYEFHGE----SYV---DLLKKYENLAVIRTFSKAFSLAAQRIGYVVS--- 216 (335)
T ss_pred CCCCcCHHHHHHHH----hcCCEEEEECchhhhcCC----chH---HHHHhCCCEEEEEechhhccCcccceEEEEe---
Confidence 99999999988886 479999999999998521 111 2234456899999999999999999999976
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++. +..... ..+.+.++|.++..++++.++ +++.++.+.++++.+.+.|+ ++| +++.+
T Consensus 217 ~~~~~~~----l~~~~~--~~~~~~~~q~a~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~ 278 (335)
T PRK14808 217 SEKFIDA----YNRVRL--PFNVSYVSQMFAKVALDHREI-------FEERTKFIVEERERMKSALR-EMG----YRITD 278 (335)
T ss_pred CHHHHHH----HHHhcC--CCCCCHHHHHHHHHHHhCHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CEECC
Confidence 7774444 433332 235677888888777765422 35566777788899999999 876 56677
Q ss_pred CCcceeeecCC---CHHHHHHHHhcccEEEcCCC---cEEEccCChhhHHHHHHHHHHH
Q 012628 402 RQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG---RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 402 ~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~gg---Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
++| .|+|+.+ +.+.+...+.++||.++.-. |||++ +.+++++++++|+++
T Consensus 279 ~~g-~f~~~~l~~~~~~~~~~~l~~~Gi~V~~~~~~~Risi~--~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 279 SRG-NFVFIFMEKEEKERLLEHLRAKNIAVRSFREGVRITIG--KREENDMILKELEVF 334 (335)
T ss_pred CCC-eEEEEeCCCccHHHHHHHHHHCCeEEEECCCCeEEecC--CHHHHHHHHHHHHhh
Confidence 765 4667654 33344444445799998642 99988 568899999998753
No 93
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4e-39 Score=316.41 Aligned_cols=319 Identities=16% Similarity=0.134 Sum_probs=241.1
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
+..++|+.|++ ..++ |+.+.+++.+.+.......|++ .+.+++|+++|+++. +++++|++ |+|+++
T Consensus 22 ~~~~~l~~~~~----~~~~-p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~------~~~~~i~i--t~G~~~ 87 (351)
T PRK14807 22 PYKYKMDANET----PFEL-PEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYCS------VVPTNIFV--GNGSDE 87 (351)
T ss_pred CceeEccCCCC----CCCC-CHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHhC------CCcccEEE--ecCHHH
Confidence 35688999987 4443 7889999888775433467854 457999999999963 33789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++.. ..+.+||+|++++|+|..|...++..|++++.++++ +++++|++.+++++++ .+++++++++|||||
T Consensus 88 ~l~~~~~--~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~--~~~k~v~l~~p~NPt 161 (351)
T PRK14807 88 IIHLIML--AFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEK--YQPKLVFLCNPNNPT 161 (351)
T ss_pred HHHHHHH--HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhc--cCCCEEEEeCCCCCC
Confidence 9999843 347799999999999999999999999999999984 4578999999999874 256778889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|++ +++.++|+||+|.++. +. ... ......+++++++||||.||+||+|+||+++ +
T Consensus 162 G~~~~~~~l~~l~~---~~~~~~ivDe~y~~~~-~~---~~~---~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~---~ 228 (351)
T PRK14807 162 GSVIEREDIIKIIE---KSRGIVVVDEAYFEFY-GN---TIV---DVINEFENLIVLRTLSKAFGLAGLRVGYAVA---N 228 (351)
T ss_pred CCCCCHHHHHHHHH---hCCCEEEEeCcchhhc-cc---chH---HHhhhCCCEEEEecchHhcccchhceeeeec---C
Confidence 99999888777764 5577899999998874 21 111 2234457899999999999999999999965 8
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.++.+ ...... .+.+.++|.++..+|+++. +++..+.++++++.+.+.|+ ++. ++.+. +
T Consensus 229 ~~~~~~~----~~~~~~--~~~~~~~q~~~~~~l~~~~--------~~~~~~~~~~~r~~l~~~l~-~~~---g~~~~-~ 289 (351)
T PRK14807 229 ENILKYL----NLVKSP--YNINSLSQVIALKVLRTGV--------LKERVNYILNERERLIKELS-KIP---GIKVY-P 289 (351)
T ss_pred HHHHHHH----HHccCC--CCcCHHHHHHHHHHHhHHH--------HHHHHHHHHHHHHHHHHHHH-hCC---CcEEC-c
Confidence 8844444 333322 2567888999988887532 24455667788888999998 762 15655 4
Q ss_pred CcceeeecCCC-HHHHHHHHhcccEEEcCCC---------cEEEccCChhhHHHHHHHHHHHH
Q 012628 403 QIGMFSFTGLN-KAQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 403 ~~g~f~~~~l~-~~~~~~ll~~~gI~v~~gg---------Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
.+|+|+|+.+. .+.+.+.+.++||.+.+++ ||+++ +.++.+.++++|++++
T Consensus 290 ~~~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 290 SKTNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVS--SCEANDYLINGLKELL 350 (351)
T ss_pred CCccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC--CHHHHHHHHHHHHHhh
Confidence 45778898763 3444444444699986641 99998 5678899999998754
No 94
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3e-39 Score=315.23 Aligned_cols=309 Identities=17% Similarity=0.200 Sum_probs=236.1
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.+.|+|+.|++ .+++ ++.+.+++.+.+.......| |..|.+++|+++++++. +++++|++ |+|+++
T Consensus 18 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~Y-~~~g~~~lr~~ia~~~~------~~~~~I~~--t~G~~~ 83 (337)
T PRK03967 18 NYRIWLDKNEN----PFDL-PEELKEEIFEELKRVPFNRY-PHITSDPLREAIAEFYG------LDAENIAV--GNGSDE 83 (337)
T ss_pred CceEEecCCCC----CCCC-CHHHHHHHHHHhhcCccccC-CCCCHHHHHHHHHHHhC------cCcceEEE--cCCHHH
Confidence 46799999986 3433 78889988887754323678 45799999999999974 45899999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++. ..+ +||+|++++|+|..|...++..|++++.++++ +++++|++.+++.+. +++++++++|||||
T Consensus 84 ~l~~~~---~~~-~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~----~~~~v~~~~P~NPt 153 (337)
T PRK03967 84 LISYLV---KLF-EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKAK----NASAVFICSPNNPT 153 (337)
T ss_pred HHHHHH---HHh-CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhcc----CCCEEEEeCCCCCC
Confidence 998863 233 79999999999999999899999999999984 357899999987653 45677789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++.+++ ++++++|+||+|.++... +........+++++++||||.||++|+|+||+++ +
T Consensus 154 G~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~-------~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~---~ 219 (337)
T PRK03967 154 GNLQPEEEILKVL----ETGKPVVLDEAYAEFSGK-------SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIA---N 219 (337)
T ss_pred CCCCCHHHHHHHH----hcCCEEEEECchhhhccc-------chHHHHhhCCCEEEEecchHhhcchhhhheeeec---C
Confidence 9999988766664 479999999999988632 1112334456899999999999999999999966 7
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.++. +..... .+ +.+.++|.++..+|++.++ +.+.++.+.++++.+.+.|. +. ..+
T Consensus 220 ~~~i~~----~~~~~~-~~-~~~~~~q~~~~~~l~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~--------~~~ 277 (337)
T PRK03967 220 EEIIDA----LYRIKP-PF-SLNILTMKIVRLALDHYDL-------IEERIDYIIKERERVRRELG-EY--------AYP 277 (337)
T ss_pred HHHHHH----HHhhcC-CC-CCCHHHHHHHHHHHhCHHH-------HHHHHHHHHHHHHHHHHHhc-cC--------cCC
Confidence 774444 443332 23 6678999999988876543 23444555667778888887 54 235
Q ss_pred CcceeeecCCCHHHHHHHHhcccEEEcCCC-------cEEEccCChhhHHHHHHHHHHHHh
Q 012628 403 QIGMFSFTGLNKAQSDNMTNKWHVYMTKDG-------RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 403 ~~g~f~~~~l~~~~~~~ll~~~gI~v~~gg-------Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
.+++|+|+.++ +.+.|++ +||.+++++ ||+++ +.++.+.++++|+++..
T Consensus 278 ~~~~~~~~~~~--~~~~l~~-~gi~v~~~~~~~~~~~Ri~~~--~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 278 SDANFLLLKLD--AYDYLLE-NGIVVRKLSGRLEGHIRVTVG--KREENDEFIKALKEIKE 333 (337)
T ss_pred CCCcEEEEhHH--HHHHHHH-CCEEEEeCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHH
Confidence 77899998663 5666666 599997642 99988 45778888888887664
No 95
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=5.5e-39 Score=315.39 Aligned_cols=316 Identities=16% Similarity=0.135 Sum_probs=242.6
Q ss_pred CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
..++++||+.|++ ..++ ++.+.+++.+.+.. ...|++..|.+++|+++++++. +++++|++ |+|+
T Consensus 20 ~~~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~~------~~~~~I~i--t~Ga 84 (349)
T PRK07908 20 AGPGLLDFAVNVR----HDTP-PEWLRERLAARLGD--LAAYPSTEDERRARAAVAARHG------RTPDEVLL--LAGA 84 (349)
T ss_pred CCCCeEEecCCCC----CCCC-CHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHhC------cChhhEEE--CCCH
Confidence 3568999999986 3333 78899999887753 3679888899999999999973 34899999 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++++.++.. +.+ +.++++.|+|..+...++..|++++.+|+++ ++++|++.+ ++ ++++++++||||
T Consensus 85 ~~al~~~~~----l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~---~~~~i~l~np~N 150 (349)
T PRK07908 85 AEGFALLAR----LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PD---DADLVVIGNPTN 150 (349)
T ss_pred HHHHHHHHh----cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----cc---CCCEEEEcCCCC
Confidence 999998732 566 5677889999999999999999999999952 378888754 32 567888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++.+++.+ +|+ ++.++|+||+|.++..+. ..++.. ...+++++++||||.|+++|+|+||+++
T Consensus 151 PTG~~~~~~~l~~---l~~-~~~~iIvDe~y~~~~~~~----~~~l~~--~~~~~~i~i~S~SK~~~l~GlRiG~~~~-- 218 (349)
T PRK07908 151 PTSVLHPAEQLLA---LRR-PGRILVVDEAFADAVPGE----PESLAG--DDLPGVLVLRSLTKTWSLAGLRVGYALG-- 218 (349)
T ss_pred CCCCCcCHHHHHH---HHh-cCCEEEEECcchhhccCC----cccccc--ccCCCEEEEeecccccCCccceeeeeec--
Confidence 9999999886555 455 578899999999885431 122222 1335799999999999999999999966
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
+++.++.+ ...... + +.+...+.++..++.+.. .+++++.+++++++++++.+.|+ ++| +++.
T Consensus 219 -~~~~~~~~----~~~~~~-~-~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~~r~~l~~~L~-~~~----~~~~ 281 (349)
T PRK07908 219 -APDVLARL----TRGRAH-W-PVGTLQLEAIAACCAPRA-----VAEAAADAARLAADRAEMVAGLR-AVG----ARVV 281 (349)
T ss_pred -CHHHHHHH----HhcCCC-C-CccHHHHHHHHHHhcccc-----hHHHHHHHHHHHHHHHHHHHHHH-hCC----cEec
Confidence 77754444 332222 2 445556666666666332 24467889999999999999999 775 6777
Q ss_pred cCCcceeeecCCC-HHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHHHHHHh
Q 012628 401 LRQIGMFSFTGLN-KAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 401 ~~~~g~f~~~~l~-~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
.|.+|+|+|+.+. .+.+..+++++||.+.||. |||++ +++++++++++|++++.
T Consensus 282 ~p~~g~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 282 DPAAAPFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILK 346 (349)
T ss_pred cCCCceEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHh
Confidence 7788999999875 4556666677899998861 99996 67899999999988764
No 96
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=319.05 Aligned_cols=311 Identities=18% Similarity=0.220 Sum_probs=236.8
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
..++|+.+++ ..++ ++.+ .......| |.....++++++++++. +++++|++ |+|++++
T Consensus 29 ~~~~l~~Nen----p~~~-~~~~--------~~~~~~~Y-p~~~~~~l~~~~a~~~g------~~~~~I~~--~~Gs~e~ 86 (351)
T PRK01688 29 GDVWLNANEY----PTAV-EFQL--------TQQTLNRY-PECQPKAVIENYAAYAG------VKPEQVLV--SRGADEG 86 (351)
T ss_pred CceEecCCCC----CCCC-Chhh--------cccccccC-CCCChHHHHHHHHHHhC------CCHHHEEE--cCCHHHH
Confidence 4689998876 3332 3332 11123567 55556899999999953 24899999 9999999
Q ss_pred HHHHHHHHHHhCCC-CEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 164 LRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 164 ~~l~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
+.++.. ..+.+| |+|+++.|+|..|...++..|++++.+|++ +++++|++.+++++ + +++++++|||||||
T Consensus 87 i~~~~~--~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~~-~---~~~lv~l~nPnNPT 158 (351)
T PRK01688 87 IELLIR--AFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTL--DNWQLDLPAIADNL-D---GVKVVYVCSPNNPT 158 (351)
T ss_pred HHHHHH--HhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHHhc-c---CCcEEEEeCCCCCC
Confidence 999843 336686 999999999999999999999999999984 35899999999887 3 67788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|++.|++ +.+||+||+|.+|... . +...++...+++++++||||.||++|+|+||+++ +
T Consensus 159 G~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~---~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~---~ 228 (351)
T PRK01688 159 GNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ---A---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLA---N 228 (351)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC---C---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhC---C
Confidence 999999999999999986 6889999999998732 1 2223445567999999999999999999999965 7
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.++. +.+.... + +.+.++|.++..+|.+... +.+++.++.++++|+++.+.|+ +++. +..+.|
T Consensus 229 ~~~i~~----l~~~~~~-~-~v~~~~~~~a~~~L~~~~~-----~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~p 293 (351)
T PRK01688 229 EEVINL----LLKVIAP-Y-PLSTPVADIAAQALSPQGI-----AAMRERVAEINANRQWLIAALK-EIPC---VEQVFD 293 (351)
T ss_pred HHHHHH----HHhccCC-C-CCCHHHHHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHHH-hCCC---CCeECC
Confidence 884444 4333222 3 5667778888778875421 3356777888899999999999 8741 443456
Q ss_pred CcceeeecCCC--HHHHHHHHhcccEEEcCC----C-----cEEEccCChhhHHHHHHHHH
Q 012628 403 QIGMFSFTGLN--KAQSDNMTNKWHVYMTKD----G-----RISLAGLSLAKCEYLADAII 452 (459)
Q Consensus 403 ~~g~f~~~~l~--~~~~~~ll~~~gI~v~~g----g-----Ris~~~~~~e~i~~~~~~l~ 452 (459)
.+++|+|+.+. .++.+.|++ +||.++++ | |||++ ++++++.++++|+
T Consensus 294 s~~nfi~~~~~~~~~l~~~L~~-~gi~vr~~~~~~~~~~~iRis~~--~~~e~~~l~~al~ 351 (351)
T PRK01688 294 SETNYILARFTASSAVFKSLWD-QGIILRDQNKQPGLSNCLRITIG--TREECQRVIDALR 351 (351)
T ss_pred CCCcEEEEEcCCHHHHHHHHHH-CCeEEEECCCcCCCCCeEEEeCC--CHHHHHHHHHhhC
Confidence 67889888763 345666765 69999864 2 99998 6799999998873
No 97
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-39 Score=315.72 Aligned_cols=296 Identities=20% Similarity=0.259 Sum_probs=228.9
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHhhhCC
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDAR 198 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~G 198 (459)
..|+. .+..+||+++|+++. +++++|++ |+|+++++.++.. ..+.+| |+|++++|+|..|...++..|
T Consensus 54 ~~Y~~-~~~~~lr~~ia~~~~------~~~~~I~~--t~G~~~~l~~~~~--~~~~~g~~~vlv~~p~y~~~~~~~~~~g 122 (364)
T PRK04781 54 RRYPD-PQPPGLRSALAALYG------CAPEQLLI--GRGSDEAIDLLVR--ALCVPGRDAVLVTPPVFGMYAVCARLQN 122 (364)
T ss_pred ccCCC-CCHHHHHHHHHHHhC------cChHHEEE--eCCHHHHHHHHHH--HhcCCCCCeEEEcCCChHHHHHHHHHcC
Confidence 56754 457999999999973 34889999 9999999999843 335688 799999999999999889999
Q ss_pred CCeeeeeeec-CCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCC
Q 012628 199 VPWSEYRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (459)
Q Consensus 199 ~~v~~v~~~~-~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~ 277 (459)
++++.+|+.+ ++++.+|++++++.+.. ++++++++++||||||.+++.+++++|++.|+ ++++||+||+|.+|.+.
T Consensus 123 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~ 199 (364)
T PRK04781 123 APLVEVPLVDGADGFHADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDV 199 (364)
T ss_pred CEEEEEecCCCccCCCcCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCC
Confidence 9999999843 34567899998766543 36788888999999999999999999999986 48999999999999753
Q ss_pred CCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhC
Q 012628 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 357 (459)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 357 (459)
. +...+.+..+++++++||||.||++|+|+||+++ +++.+ +.+.+.... + +.+.++|.++..+|.
T Consensus 200 ~------~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~---~~~l~----~~l~~~~~~-~-~~~~~~~~~a~~~l~ 264 (364)
T PRK04781 200 P------SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIA---NAELI----AVLRRCQAP-Y-PVPTPCAALAEQALS 264 (364)
T ss_pred c------chHHHHhhCCCEEEEecChhhcccccceeeeeeC---CHHHH----HHHHhccCC-C-CCCHHHHHHHHHHHh
Confidence 1 2223345567899999999999999999999966 88844 444443322 3 667888888888888
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCC-HHHHHHHHhcccEEEcCCC----
Q 012628 358 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN-KAQSDNMTNKWHVYMTKDG---- 432 (459)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~-~~~~~~ll~~~gI~v~~gg---- 432 (459)
++.+ +.+.+..+.++++++.+.+.|+ +++ ++..+.|.+|+|+|+.+. .+.+...++++||.+.+|.
T Consensus 265 ~~~~-----~~~~~~~~~~~~~r~~l~~~L~-~~~---~~~~~~p~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~ 335 (364)
T PRK04781 265 APAL-----AVTARRVAEVRAERERLHAALA-QLP---GVRRVYPSQGNFLLVRFDDAEAAFQALLAAGVVVRDQRAAPR 335 (364)
T ss_pred cccH-----HHHHHHHHHHHHHHHHHHHHHH-hCC---CCCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEeeCCCCCC
Confidence 7543 1234555678999999999999 873 144345677899998773 3444444456799998862
Q ss_pred -----cEEEccCChhhHHHHHHHHHHHH
Q 012628 433 -----RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 433 -----Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
||+++ +.+++++++++|+++.
T Consensus 336 ~~~~~Ris~~--~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 336 LSDALRITLG--TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CCCeEEEeCC--CHHHHHHHHHHHHHHH
Confidence 99998 5788999999998754
No 98
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.6e-38 Score=314.60 Aligned_cols=322 Identities=16% Similarity=0.156 Sum_probs=251.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
..++++|+.|.+ ...+ ++.+.+++.+.... ...|++.. ..++|+++|+++.. ++++|++ |+|++
T Consensus 31 ~~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~~~------~~~~i~~--t~G~~ 94 (367)
T PRK02731 31 IADIIKLASNEN----PLGP-SPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKFGV------DPERIIL--GNGSD 94 (367)
T ss_pred CCceEEecCCCC----CCCC-CHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHhCc------CHHHEEE--cCCHH
Confidence 457999999975 2222 67788888887653 36786544 47999999999732 3789999 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
+++.++. ...+.+||+|++++|+|..|...++..|++++.+|. +++++|++.+++.+++ +++++++++||||
T Consensus 95 ~~l~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~---~~~~v~l~~p~np 166 (367)
T PRK02731 95 EILELLA--RAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTP---RTRLVFIANPNNP 166 (367)
T ss_pred HHHHHHH--HHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCC---CCcEEEEeCCCCC
Confidence 9998873 333679999999999999999888999999999987 2578999999999874 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|++.|+ +|+++|+||+|.++.+++. ...++ ...+..+++++++||||.||++|+|+||+++
T Consensus 167 tG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~--~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~--- 239 (367)
T PRK02731 167 TGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD--YEDGL-ELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA--- 239 (367)
T ss_pred CCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC--cccHH-HHHhhcCCEEEEeeehHhhcCcccceeeeeC---
Confidence 999999999999999875 6999999999998886432 12233 2234457899999999999999999999966
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++..+. +...... + +.+.++|.++..+|++.. .+++.++.++++++.+.+.|+ ++| +.+.
T Consensus 240 ~~~~~~~----l~~~~~~-~-~~~~~~~~~a~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~- 300 (367)
T PRK02731 240 PPEIIDA----LNRVRQP-F-NVNSLALAAAVAALDDDA-------FVEKSRALNAEGMAWLTEFLA-ELG----LEYI- 300 (367)
T ss_pred CHHHHHH----HHHccCC-C-CCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHH-HCC----CccC-
Confidence 7774444 4333222 2 556788999988887643 256778889999999999999 876 4555
Q ss_pred CCcceeeecCC----CH-HHHHHHHhcccEEEcCC------C--cEEEccCChhhHHHHHHHHHHHHh
Q 012628 402 RQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 402 ~~~g~f~~~~l----~~-~~~~~ll~~~gI~v~~g------g--Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
+.+|+|+|+.+ +. ++.+.|.+ +||.+.++ + ||+++ +.++++.++++|+++++
T Consensus 301 ~~~g~~~~i~~~~~~~~~~~~~~L~~-~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 301 PSVGNFILVDFDDGKDAAEAYQALLK-RGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHH-CCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 44577888765 33 44566655 69999886 2 99987 67899999999998875
No 99
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=1.3e-38 Score=313.27 Aligned_cols=323 Identities=15% Similarity=0.156 Sum_probs=246.4
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
+++|+|+.|.+ ..++ ++.+.+++.+.+.. ...| |..|.+++|+++|+++. +++++|++ |+|+++
T Consensus 22 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~--~~G~~~ 85 (352)
T PRK03321 22 PGAIKLSSNET----PFGP-LPSVRAAIARAAAG--VNRY-PDMGAVELRAALAEHLG------VPPEHVAV--GCGSVA 85 (352)
T ss_pred ccceeccCCCC----CCCC-CHHHHHHHHHHHHh--cCcC-CCCcHHHHHHHHHHHhC------cCHHHEEE--CCCHHH
Confidence 36899999987 4433 67899999887653 2557 56899999999999974 33789999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++. ...+.+||+|+++.|+|..|...++..|++++.+|++ .++++|++.+++.+++ +++++++++|||||
T Consensus 86 ~l~~~~--~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~~~~---~~~~v~l~~p~NPt 158 (352)
T PRK03321 86 LCQQLV--QATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLT--PDHTHDLDAMAAAITD---RTRLIFVCNPNNPT 158 (352)
T ss_pred HHHHHH--HHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCC--CCCCCCHHHHHHhhcc---CCCEEEEeCCCCCc
Confidence 998873 3346799999999999999999999999999999984 2478999999998875 66777788999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++.++++.| +++++||+||+|+++.+++. ...++. .....+++++++||||.||++|+|+||+++ +
T Consensus 159 G~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~--~~~~~~-~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~ 231 (352)
T PRK03321 159 GTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDD--VPDGLE-LVRDHPNVVVLRTFSKAYGLAGLRVGYAVG---H 231 (352)
T ss_pred CCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcC--CCcHHH-HHhhCCCEEEEecchHHhhhHHHhhhhhcC---C
Confidence 9999999988888876 47999999999999987531 112222 234457899999999999999999999965 7
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.++.+. +.. ...+.+.++|.++...|...+ .| .+..+.+.++++.+.+.|+ +.| +.+.+
T Consensus 232 ~~~~~~~~----~~~--~~~~~s~~~q~~a~~~l~~~~---~~----~~~~~~~~~~r~~~~~~L~-~~~----~~~~~- 292 (352)
T PRK03321 232 PEVIAALR----KVA--VPFSVNSLAQAAAIASLAAED---EL----LERVDAVVAERDRVRAALR-AAG----WTVPP- 292 (352)
T ss_pred HHHHHHHH----Hhc--CCCCCCHHHHHHHHHHhcCHH---HH----HHHHHHHHHHHHHHHHHHH-HCC----CccCC-
Confidence 77554443 322 223678888888877776432 12 2233344456677889998 776 45444
Q ss_pred CcceeeecCCC---HHHHHHHHhcccEEEcCCC----cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 403 QIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 403 ~~g~f~~~~l~---~~~~~~ll~~~gI~v~~gg----Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
.+|+|+|+.+. .++++.| +++||.+.+.+ ||+++ +.+++++++++|++++..
T Consensus 293 ~~g~~i~i~l~~~~~~~~~~l-~~~gI~v~~~~~~~iRi~~~--~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 293 SQANFVWLPLGERTADFAAAA-AEAGVVVRPFAGEGVRVTIG--APEENDAFLRAARAWRAG 351 (352)
T ss_pred CCCCEEEEeCCCCHHHHHHHH-HHCCEEEEccCCCcEEEeeC--CHHHHHHHHHHHHHHhcc
Confidence 45788998652 3445565 55799999853 99986 679999999999988754
No 100
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.5e-38 Score=309.78 Aligned_cols=285 Identities=14% Similarity=0.119 Sum_probs=215.6
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCC
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARV 199 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~ 199 (459)
..| |.....+||+++|+++... +++|++ |+|+++++.++.. .+.+| .|++++|+|..|...++..|+
T Consensus 35 ~~Y-p~~~~~~lr~~ia~~~~~~------~~~I~i--t~Gs~~~l~~~~~---~~~~~-~vv~~~P~y~~y~~~~~~~G~ 101 (332)
T PRK06425 35 SIY-PEISYTDIEDQIKIYTQGL------KIKVLI--GPGLTHFIYRLLS---YINVG-NIIIVEPNFNEYKGYAFTHGI 101 (332)
T ss_pred ccC-cCcCHHHHHHHHHHHhCCC------cceEEE--CCCHHHHHHHHHH---HhCCC-cEEEeCCChHHHHHHHHHcCC
Confidence 557 6666899999999996543 788999 9999999999843 35676 577779999999999999999
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.+|+++ +++|.+.+++ .+++++++||||||||.+++.+++++|+++|+++|++||+||+|.++.+++
T Consensus 102 ~v~~vp~~~---~~~~~~~l~~------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~- 171 (332)
T PRK06425 102 RISALPFNL---INNNPEILNN------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR- 171 (332)
T ss_pred eEEEEeCCc---ccCcHHHHhh------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc-
Confidence 999999842 3456554432 156677788999999999999999999999999999999999999998642
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCCh
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 359 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 359 (459)
..+...+....+++++++||||.||+||+|+||+++ +++.++. +...... + +.+..++. ++...
T Consensus 172 ---~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~---~~~li~~----l~~~~~~-~-~~~~~~~~----~l~~~ 235 (332)
T PRK06425 172 ---AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIAT---DDYNMKI----SRKITEP-W-SVCDPAID----FIRSI 235 (332)
T ss_pred ---chhHHHHhccCCCEEEEeecHHhcCCchhhheeeec---CHHHHHH----HHHcCCC-C-ccCHHHHH----HHHHh
Confidence 123334444557899999999999999999999966 7774444 3332221 2 22232222 22221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC--CHHHHHHHHhcccEEEcCCC-----
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----- 432 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~gg----- 432 (459)
.. ..++++.++.++++++.+.+.|+ ++| +.+..+.+|+|+|+.+ +.++.+.|++ +||.+.||.
T Consensus 236 ~~----~~~~~~~~~~~~~~r~~l~~~L~-~~g----~~~~~~~~g~f~~~~~~~~~~~~~~l~~-~gi~v~~~~~f~~~ 305 (332)
T PRK06425 236 DL----DYVAKHSLDIMENERSYLINNLE-AMG----FRAAGDPSANFITFMIPDAHDFYSYLLK-NGILVRLLDDYECL 305 (332)
T ss_pred hh----HHHHHHHHHHHHHHHHHHHHHHH-HCC----CEECCCCCceEEEEEcCCHHHHHHHHHH-CCeEEEECCCCCCC
Confidence 21 23457889999999999999999 886 5665444577888766 3455677776 599998861
Q ss_pred -----cEEEccCChhhHHHHHHHHHHHH
Q 012628 433 -----RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 433 -----Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
|||++ +.+++++++++|++++
T Consensus 306 ~~~~iRis~~--~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 306 GEQYIRIAIR--RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 99998 5689999999998775
No 101
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.4e-38 Score=306.09 Aligned_cols=304 Identities=15% Similarity=0.128 Sum_probs=227.6
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.++++|+.+++ +.+.| ++.+.. .. ...|+ ... .+||+++++++.-. ++++|++ |+|+++
T Consensus 24 ~~~i~ls~Nen--p~~~~--~~~~~~---~~-----~~~Yp-~~~-~~L~~~ia~~~~~~-----~~~~I~i--~~Gs~e 82 (339)
T PRK06959 24 DAWLDLSTGIN--PHGYP--VPPVPA---DA-----WRRLP-EDD-DGLAACAARYYGAP-----DAAHVLP--VAGSQA 82 (339)
T ss_pred hhhceeccCCC--CCCCC--CCCCCH---HH-----HHhCC-Cch-HHHHHHHHHHhCCC-----CcccEEE--CcCHHH
Confidence 46799999875 22222 112111 11 14474 444 89999999996432 2589999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++ ...+.+|| |++++|+|+.|...++..|++++.+|.++ +.+ .+ ..+++++|||||||
T Consensus 83 ~i~~l---~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~---~~~~v~l~nPnNPT 143 (339)
T PRK06959 83 AIRAL---PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PA---ALTHLIVVNPNNPT 143 (339)
T ss_pred HHHHH---HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cc---cCCEEEEeCCCCCC
Confidence 99875 33466776 89999999999999999999999887731 222 21 33467789999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|++.|++++.++|+||+|.++.+. .++..+. ..+++++++||||.||++|+|+||+++ +
T Consensus 144 G~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~------~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~---~ 213 (339)
T PRK06959 144 AERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA------ASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLA---A 213 (339)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc------ccchhcc-CCCCEEEEecChhhcCCcchheEEEec---C
Confidence 99999999999999999999999999999998642 1222222 346799999999999999999999966 7
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.++.+ ..... .+ +.+.++|.++..+|+++++ .++.++.++++++.+.+.|+ ++| +++.
T Consensus 214 ~~li~~l----~~~~~-~~-~vs~~~q~a~~~~L~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~g----~~~~-- 273 (339)
T PRK06959 214 PALLAAL----RDALG-AW-TVSGPARHAVRAAFADAAW-------QAAMRERLAADGARLAALLR-AHG----FAVH-- 273 (339)
T ss_pred HHHHHHH----HHhcC-CC-CCcHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHHHHHHHH-HCC----CCcc--
Confidence 8844444 43332 23 5678899999999987644 46778999999999999999 887 3443
Q ss_pred CcceeeecCC-CH-HHHHHHHhcccEEEcCCC-----cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 403 QIGMFSFTGL-NK-AQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 403 ~~g~f~~~~l-~~-~~~~~ll~~~gI~v~~gg-----Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
.+++|+|+.+ +. ++.+.|.+ +||.++..+ ||++++ +.+++++++++|+++++.+
T Consensus 274 ~~~~f~~~~~~~~~~l~~~l~~-~GI~vr~~~~~~~lRisi~~-~~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 274 ATPLFSWTDDPRAAALHAALAR-RGIWTRYFAPPPSVRFGLPA-DEAEWQRLEDALAECVPTL 334 (339)
T ss_pred CcceEEEEeCCCHHHHHHHHHh-CCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHHHH
Confidence 3578999876 33 44556655 699998753 999965 7789999999999887654
No 102
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-38 Score=311.89 Aligned_cols=312 Identities=15% Similarity=0.140 Sum_probs=235.3
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.+.++|+.+++ ..++ ++.+ . .. . ...|++ .+.++||+++|+++. +++++|++ |+|+++
T Consensus 31 ~~~~~l~~ne~----~~~~-~~~~-----~-~~-~-~~~Yp~-~~~~~Lr~aia~~~~------~~~~~I~i--t~Gs~~ 88 (354)
T PRK04635 31 RGDIWINANES----PFNN-EYKL-----D-LA-R-LNRYPE-CQPPELINAYSAYAG------VAPEQILT--SRGADE 88 (354)
T ss_pred CCcEEeeCCCC----CCCC-Chhh-----h-hH-H-hccCCC-CCHHHHHHHHHHHhC------cCHHHEEE--eCCHHH
Confidence 35689999886 3332 3322 1 11 1 266854 468999999999863 34899999 999999
Q ss_pred HHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 163 SLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 163 a~~l~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
++.++... .+.+| |+|++++|+|..|...++..|++++.+|++ +++.+|++.++ .+ + +++++++||||||
T Consensus 89 ~i~~~~~~--~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~-~~-~---~~~li~i~nP~NP 159 (354)
T PRK04635 89 AIELLIRA--FCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIE-QL-D---GAKLVFICNPNNP 159 (354)
T ss_pred HHHHHHHH--hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHH-hc-c---CCCEEEEeCCCCC
Confidence 99998433 35688 999999999999999999999999999984 35789998886 33 2 6778888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++++|++.|+ +++||+||+|.++... . +...+....+++++++||||.||++|+|+||+++
T Consensus 160 TG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~---~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~--- 228 (354)
T PRK04635 160 TGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE---Y---SVADLLASYPNLVVLRTLSKAFALAGARCGFTLA--- 228 (354)
T ss_pred CCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC---c---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhC---
Confidence 999999999999999876 4999999999988732 1 2223344557899999999999999999999966
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++.+ ..... .+ +.+...|.++..+|.+.++ +.+++.++.++++++.+.+.|+ +++. +.+.+
T Consensus 229 ~~~~~~~l----~~~~~-~~-~~~~~~~~~a~~~l~~~~~-----~~~~~~~~~~~~~r~~l~~~L~-~~~~---~~~~~ 293 (354)
T PRK04635 229 NEELIEIL----MRVIA-PY-PVPLPVSEIATQALSEAGL-----ARMKFQVLDLNAQGARLQAALS-MYGG---AKVLE 293 (354)
T ss_pred CHHHHHHH----HhhcC-CC-CCCHHHHHHHHHHHhcccH-----HHHHHHHHHHHHHHHHHHHHHH-hCCC---ceECC
Confidence 77744443 33222 22 5667777888777765432 2356777889999999999999 8741 46666
Q ss_pred CCcceeeecCC-CHHHHHHHHhcccEEEcCC------C--cEEEccCChhhHHHHHHHHHHH
Q 012628 402 RQIGMFSFTGL-NKAQSDNMTNKWHVYMTKD------G--RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 402 ~~~g~f~~~~l-~~~~~~~ll~~~gI~v~~g------g--Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
++ |.|+|+.+ +.+.+.++++++||.++++ + |||++ +.++++.++++|++.
T Consensus 294 ~~-g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~~ 352 (354)
T PRK04635 294 GN-GNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSFS--NRAETDKLIGLIRNQ 352 (354)
T ss_pred CC-CcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHh
Confidence 65 56888766 4444555556679998654 1 99997 679999999999764
No 103
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-38 Score=295.24 Aligned_cols=321 Identities=17% Similarity=0.132 Sum_probs=255.1
Q ss_pred CCCCCCCcccHHHHHHHHHHHh-cCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhC
Q 012628 119 NKEYLPIEGLAAFNKVTAELLF-GADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA 197 (459)
Q Consensus 119 ~~~Y~~~~g~~~lr~aia~~l~-~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~ 197 (459)
..+|++..|.++|+..|.++.. .-+.....+-+|++ |+|.|.+++.+ +...+++||.|++..++|......++..
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiii--t~G~t~~l~~~--l~~~~N~gd~vlie~~ty~~AL~s~~a~ 168 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIII--TNGNTDGLFKV--LRTLINRGDHVLIEEYTYPSALQSMEAL 168 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEE--ecCCchHHHHH--HHHhhcCCCceEEecccchHHHHhcccc
Confidence 4789999999999999999743 22333444458988 99999999998 4444889999999999999999999999
Q ss_pred CCCeeeeeeecCCCCCCCHHHHHHHHHc-------CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 198 RVPWSEYRYYDPKTVGLDFEGMIADIKA-------APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 198 G~~v~~v~~~~~~~~~~d~e~l~~~i~~-------~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
|+++++|+++ ..++++|.|++.+.. .+...+++.+++.+||||..++.+..++|.++|++||++||+||.
T Consensus 169 gv~~ipv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdp 245 (472)
T KOG0634|consen 169 GVKIIPVKMD---QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDP 245 (472)
T ss_pred CceEEecccc---CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCc
Confidence 9999999884 457999999998865 123456777999999999999999999999999999999999999
Q ss_pred CCCCCCCCC------CCChhHHHHHH----------hcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHH
Q 012628 271 YQGFASGSL------DNDASSVRLFA----------TRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 334 (459)
Q Consensus 271 y~~~~~~~~------~~~~~~~~~~~----------~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~ 334 (459)
|.-+.++.. +....+...+. +..++|+...||||.++ ||+|+||+.+ ++-.++++.+.
T Consensus 246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~---~~~~l~ril~~-- 319 (472)
T KOG0634|consen 246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITG---NSLFLKRILDL-- 319 (472)
T ss_pred cceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeec---CHHHHHHHhhh--
Confidence 998887621 11111211222 23469999999999999 9999999866 88755555443
Q ss_pred hhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-cccccCCcceeeecCCC
Q 012628 335 RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD-WSFILRQIGMFSFTGLN 413 (459)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~g~f~~~~l~ 413 (459)
....+.+++.+.|.++...|+.-+. +.|.+.+.+.+..|..+++.+...|. +. +|.. .++.+|.+|+|+|+.++
T Consensus 320 --ae~~t~~pSg~sq~iv~a~l~~wgq-eG~~~wi~~l~~~Yt~Rrn~~l~Al~-ky-lp~~~~~~~~P~aGmFiwv~i~ 394 (472)
T KOG0634|consen 320 --AEVATSGPSGFSQGIVYAMLKRWGQ-EGFLRWIQHLRSSYTERRNALLSALD-KY-LPKSVCEYHPPKAGMFIWVEIP 394 (472)
T ss_pred --cceeecCcccccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-CCCCeeEEecCCcceEEEEEec
Confidence 3344567899999998777764222 22456689999999999999999998 75 4555 67889999999999763
Q ss_pred -------------HHHHHHHHhcccEEEcCCC---------------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 414 -------------KAQSDNMTNKWHVYMTKDG---------------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 414 -------------~~~~~~ll~~~gI~v~~gg---------------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
.+.+..++.++||.+++|. |++++..+.|+++++++++..++++
T Consensus 395 ~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 395 YINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred ccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHH
Confidence 2345566677899999982 9999988999999999999999886
No 104
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=7.3e-38 Score=307.36 Aligned_cols=315 Identities=16% Similarity=0.178 Sum_probs=246.4
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.++|+|+.|.| +.++ +|.+.+++.+.... ...|++..+ +++|+++++++. +++++|++ |+|+++
T Consensus 19 ~~~i~l~~~~~----~~~~-~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~--~~G~~~ 82 (346)
T TIGR01141 19 KEVIKLNSNEN----PFGP-PPKAKEALRAEADK--LHRYPDPDP-AELKQALADYYG------VDPEQILL--GNGSDE 82 (346)
T ss_pred CceEEccCCCC----CCCC-CHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHhC------cChHHEEE--cCCHHH
Confidence 47999999987 4444 78899999987643 267866665 899999999975 23788999 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
+++++. ...+.+||+|++++|+|+.|...++..|++++.+|++ .++.+|++.+++.+.+ +++++++++|||||
T Consensus 83 ~l~~~~--~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~---~~~~v~l~~p~Npt 155 (346)
T TIGR01141 83 IIELLI--RAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLD--EDGQLDLEDILVAIDD---KPKLVFLCSPNNPT 155 (346)
T ss_pred HHHHHH--HHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccC--CCCCCCHHHHHHhcCC---CCCEEEEeCCCCCC
Confidence 998873 3346799999999999999998899999999999984 3467999999998754 67788889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|++.|+ +|+++|+|++|.++...+ +. . ......+++++++||||.||++|+|+||+++ +
T Consensus 156 G~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~---~~--~-~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~ 225 (346)
T TIGR01141 156 GNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP---ST--L-PLLAEYPNLIVLRTLSKAFGLAGLRIGYAIA---N 225 (346)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc---cH--H-HHHhhCCCEEEEehhhHhhhchhhhceeeec---C
Confidence 99999999999999887 799999999999876431 11 1 1223345789999999999999999999965 7
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCccccc
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFIL 401 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~ 401 (459)
++.. +.+..... ..+.+.++|.++..++++.+ ++++.+++++++++.+.+.|+ ++ | +++.
T Consensus 226 ~~~~----~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~~g----~~~~- 286 (346)
T TIGR01141 226 AEII----DALNKVRA--PFNLSRLAQAAAIAALRDDD-------FIEKTVEEINAERERLYDGLK-KLPG----LEVY- 286 (346)
T ss_pred HHHH----HHHHhccC--CCCCCHHHHHHHHHHhCCHH-------HHHHHHHHHHHHHHHHHHHHH-hcCC----CEEC-
Confidence 7744 44433322 22567778888888887653 256788999999999999998 77 4 5544
Q ss_pred CCcceeeecCCC---HHHHHHHHhcccEEEcCC-------C--cEEEccCChhhHHHHHHHHH
Q 012628 402 RQIGMFSFTGLN---KAQSDNMTNKWHVYMTKD-------G--RISLAGLSLAKCEYLADAII 452 (459)
Q Consensus 402 ~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~g-------g--Ris~~~~~~e~i~~~~~~l~ 452 (459)
+.+|+|+|+.+. .+++++|.+ +||.+.|| + |||++ +++++++++++|+
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~L~~-~gI~v~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l~ 346 (346)
T TIGR01141 287 PSDANFVLIRFPRDADALFEALLE-KGIIVRDLNSYPGLPNCLRITVG--TREENDRFLAALR 346 (346)
T ss_pred CCcCCEEEEecCCCHHHHHHHHHH-CCeEEEeCCCcCCCCCeEEEecC--CHHHHHHHHHHhC
Confidence 446778887653 344556655 69999885 2 99987 7889999998863
No 105
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.2e-37 Score=303.13 Aligned_cols=301 Identities=15% Similarity=0.158 Sum_probs=224.4
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
++|+|+.+++ ..++.++.+.+ ..+ ..|+. +..+||++|++++. +++|++ |+|++++
T Consensus 21 ~~i~l~~ne~----p~~~~~~~~~~---~~~-----~~yp~--~~~~Lr~~ia~~~~--------~~~I~i--t~Gs~~a 76 (330)
T PRK05664 21 DWLDLSTGIA----PWPWPVPAIPA---DAW-----ARLPE--TDDGLEAAARAYYG--------APQLLP--VAGSQAA 76 (330)
T ss_pred HheeecCCcC----CCCCCCcccCH---HHH-----HhCCC--ChHHHHHHHHHHhC--------CCCEEE--CcCHHHH
Confidence 6799999964 22221222222 111 23632 33899999999963 468999 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCC
Q 012628 164 LRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTG 243 (459)
Q Consensus 164 ~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG 243 (459)
+.++ + .+.+||+|++++|+|+.|...++..|++++.+|++ .+++.++ ++++++++|||||||
T Consensus 77 l~~~--~--~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~----~~~~v~l~nP~NPTG 138 (330)
T PRK05664 77 IQAL--P--RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD----SLDVLVVVNPNNPTG 138 (330)
T ss_pred HHHH--H--HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc----CCCEEEEeCCcCCCC
Confidence 9987 2 25799999999999999999999999999999862 2444443 455677899999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCCh
Q 012628 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (459)
Q Consensus 244 ~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~ 323 (459)
.+++.+++++|+++|+++|++||+||+|.++... .++..+ ...+++++++||||.||+||+|+||+++ ++
T Consensus 139 ~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~------~s~~~~-~~~~~vi~~~SfSK~~gl~GlRiG~~v~---~~ 208 (330)
T PRK05664 139 RRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ------HSLAAC-AHRPGLIVLRSFGKFFGLAGARLGFVLA---EP 208 (330)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc------cccccc-ccCCCEEEEeeccccccCCCcceEEEEe---CH
Confidence 9999999999999999999999999999877521 122233 2346899999999999999999999966 78
Q ss_pred hHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCC
Q 012628 324 DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ 403 (459)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 403 (459)
+.++.+ ...... + +.+..+|.++..+|.+..+ .++.++.++++++.+.+.|+ ++| +. +.
T Consensus 209 ~l~~~~----~~~~~~-~-~~~~~~~~~~~~~L~~~~~-------~~~~~~~~~~~r~~l~~~L~-~~~----~~---~~ 267 (330)
T PRK05664 209 ALLRAL----AELLGP-W-TVSGPTRWLAQAALADTPW-------QRRQRERLLAASQRLAALLR-RHG----LT---PA 267 (330)
T ss_pred HHHHHH----HHhcCC-C-CCCHHHHHHHHHHHhChHH-------HHHHHHHHHHHHHHHHHHHH-HCC----Cc---cc
Confidence 844444 333222 2 4567888888888876533 35678899999999999999 876 22 33
Q ss_pred cc--eeeecCC-CHHHHHHHHhcccEEEcCCC-----cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 404 IG--MFSFTGL-NKAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 404 ~g--~f~~~~l-~~~~~~~ll~~~gI~v~~gg-----Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+| +|+|+.. +.+.+.+.+.++||.+..-+ ||+++. +.++++++.++|+++.++.
T Consensus 268 ~~~~~f~~~~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~-~~~~~~~l~~al~~~~~~~ 329 (330)
T PRK05664 268 GGCALFQWVRTEDAAALHEFLARRGILTRLFEQPASLRFGLPA-DEADWARLDQALLAYRKEA 329 (330)
T ss_pred CCcceEEEEecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC-CHHHHHHHHHHHHHHHhhc
Confidence 44 7888865 34444444455799997642 999986 6788999999998887653
No 106
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=6.4e-37 Score=298.06 Aligned_cols=315 Identities=18% Similarity=0.189 Sum_probs=236.9
Q ss_pred CccchhHHHhhhCCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCcc
Q 012628 68 DPILGVSEAFKADTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVL 147 (459)
Q Consensus 68 ~~i~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~ 147 (459)
.+|..+..++. .+.+++++|+.|.+ ..++ + ..+.... . ..+|++..+ +++|+++++++. +
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~--~-~~~~~~~----~-~~~y~~~~~-~~lr~~la~~~~------~ 62 (330)
T TIGR01140 3 GNLRRAAARYG-IPPEDWLDFSTGIN----PLGP--P-VPPIPAS----A-WARYPDPEY-DELRAAAAAYYG------L 62 (330)
T ss_pred ccHHHHHHHcC-CChhheeEccccCC----CCCC--C-hhhcchH----H-HhhCCCccH-HHHHHHHHHHhC------C
Confidence 45666666654 34568999999986 3322 2 2221111 1 266866665 999999999974 2
Q ss_pred ccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC
Q 012628 148 KEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 148 ~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~ 227 (459)
++++|++ |+|+++++.++. ..+.+| +|++++|+|..|...++..|++++.++ |++.+++.++
T Consensus 63 ~~~~i~~--t~G~~~~i~~~~---~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~--- 124 (330)
T TIGR01140 63 PAASVLP--VNGAQEAIYLLP---RLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE--- 124 (330)
T ss_pred ChhhEEE--CCCHHHHHHHHH---HHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc---
Confidence 3789999 999999999863 335677 799999999999999999999988876 7888988874
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
+++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+.. ++..+.+..+++++++||||.||
T Consensus 125 -~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~------~~~~~~~~~~~~i~~~S~SK~~g 197 (330)
T TIGR01140 125 -ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA------SLAPQAARFPGLVVLRSLTKFFG 197 (330)
T ss_pred -cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc------chhhHhccCCCEEEEEecchhhc
Confidence 34467779999999999999999999999999999999999999887531 22223334568999999999999
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 387 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 387 (459)
++|+|+||+++ +++.++.+. .... .+ +++.++|.++..++++.++ .+..+++++++++.+.+.|
T Consensus 198 ~~G~R~G~i~~---~~~~~~~l~----~~~~-~~-~~s~~~q~~~~~~l~~~~~-------~~~~~~~~~~~~~~l~~~L 261 (330)
T TIGR01140 198 LAGLRLGFVVA---HPALLARLR----EALG-PW-TVNGPARAAGRAALADTAW-------QAATRARLAAERARLAALL 261 (330)
T ss_pred CchhhhhheeC---CHHHHHHHH----hcCC-CC-CchHHHHHHHHHHHhchHH-------HHHHHHHHHHHHHHHHHHH
Confidence 99999999966 777444433 3222 22 5567888899888886543 3466789999999999999
Q ss_pred hhccCCCCCcccccCCcceeeecCC--CHHHHHHHHhcccEEEcCCC----------cEEEccCChhhHHHHHHHH
Q 012628 388 SAKDKSGKDWSFILRQIGMFSFTGL--NKAQSDNMTNKWHVYMTKDG----------RISLAGLSLAKCEYLADAI 451 (459)
Q Consensus 388 ~~~~g~~~~~~~~~~~~g~f~~~~l--~~~~~~~ll~~~gI~v~~gg----------Ris~~~~~~e~i~~~~~~l 451 (459)
+ +++. +++ .+.+|+|+|+.+ +.++.++|++ +||.+.||. ||++++ ..++ +.++++|
T Consensus 262 ~-~~~~---~~~-~~~~~~f~~~~~~~~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 262 A-RLGG---LEV-VGGTALFLLVRTPDAAALHEALAR-RGILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred H-hCCC---ceE-CCCCCeEEEEEcCCHHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 9 8762 333 455789999876 3456777776 599999862 999986 4444 7777765
No 107
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.4e-36 Score=300.03 Aligned_cols=313 Identities=17% Similarity=0.198 Sum_probs=234.2
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeec-ccch
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGT 161 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t-~ggt 161 (459)
.++|+|+.|++ ..++ +|.+.+++.+.+.. ...|++.. .+++|+++++++.. ++++|++ + +|++
T Consensus 34 ~~~i~l~~~~~----~~~~-~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~~~------~~~~i~~--~~~Ga~ 97 (361)
T PRK00950 34 ESIIKLGSNEN----PLGP-SPKAVEAIEKELSK--IHRYPEPD-APELREALSKYTGV------PVENIIV--GGDGMD 97 (361)
T ss_pred cceEEccCCCC----CCCC-CHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHhCC------CHHHEEE--eCCCHH
Confidence 37899999976 3333 77888888877653 25675544 49999999999732 3677766 4 6778
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
++++++.. ..+.+||+|++++|+|..|...++..|++++.+|. ++++++|++.+++.+++ +++++++++||||
T Consensus 98 ~~i~~~~~--~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~---~~~~v~~~~p~np 170 (361)
T PRK00950 98 EVIDTLMR--TFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITE---KTKVIFLCTPNNP 170 (361)
T ss_pred HHHHHHHH--HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhcc---CCCEEEEeCCCCC
Confidence 88888733 33579999999999999999999999999999986 45678999999998865 6677778999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++.+++.+| |+++|+++|+||+|.++... ....+....+++++++||||.||++|+|+||+++
T Consensus 171 tG~~~~~~~l~~l---~~~~~~~li~De~y~~~~~~-------~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~--- 237 (361)
T PRK00950 171 TGNLIPEEDIRKI---LESTDALVFVDEAYVEFAEY-------DYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFV--- 237 (361)
T ss_pred CCCCcCHHHHHHH---HHHCCcEEEEECchhhhCcc-------chHHHHHhcCCEEEEEeehHhhcCchhhcchhcC---
Confidence 9999888876555 56789999999999887621 1222334456899999999999999999999965
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL 401 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 401 (459)
+++.++. +...... + +.+.++|.++..+|.+.++ +++.+++++++++.+.+.|. +.+.
T Consensus 238 ~~~~~~~----~~~~~~~-~-~~~~~~~~~a~~~l~~~~~-------~~~~~~~~~~~r~~l~~~l~--------~~~~- 295 (361)
T PRK00950 238 PEWLIDY----YMRAKTP-F-SLTRLSQAAAIAALSDKEY-------IEKSIEHGIKSREYLYNELP--------FKVY- 295 (361)
T ss_pred CHHHHHH----HHHhcCC-C-CCCHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHhhcC--------eeEC-
Confidence 7774443 3333222 2 4667788888888876433 45667778888888776664 2333
Q ss_pred CCcceeeecCC---C-HHHHHHHHhcccEEEcCC------C----cEEEccCChhhHHHHHHHHHHHHh
Q 012628 402 RQIGMFSFTGL---N-KAQSDNMTNKWHVYMTKD------G----RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 402 ~~~g~f~~~~l---~-~~~~~~ll~~~gI~v~~g------g----Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
+.+++|+|+.+ + .++++.|.+ +||.+.+| + |||++ +.+++++++++|+++++
T Consensus 296 ~~~~~~i~~~~~~~~~~~~~~~l~~-~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 296 PSEANFVLVDVTPMTAKEFCEELLK-RGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIVE 361 (361)
T ss_pred CCcceEEEEECCCCCHHHHHHHHHH-CCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHhC
Confidence 45678888754 3 355667766 59999875 1 99988 66899999999998763
No 108
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=2.1e-36 Score=291.93 Aligned_cols=292 Identities=14% Similarity=0.179 Sum_probs=211.1
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.++|+|+.|++ ..+ |+.+.+++.+.++. ...|+. ...+|+++++++. ++|++ |+|+++
T Consensus 8 ~~~i~l~~~~n----p~~--p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~v--t~G~~~ 65 (311)
T PRK08354 8 EGLIDFSASVN----PYP--PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVI--TAGITE 65 (311)
T ss_pred cceeEecCCCC----CCC--CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEE--CCCHHH
Confidence 46899999864 232 57888888877653 256743 4679999999863 46988 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
++.++. ..+.+||+|++++|+|..|...++..|++++.++ +|++.+++.+++ +++++++||||||
T Consensus 66 al~~~~---~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~~----~~~vi~~~P~NPT 130 (311)
T PRK08354 66 ALYLIG---ILALRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVER----NSVVFFCNPNNPD 130 (311)
T ss_pred HHHHHH---HhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhcC----CCEEEEecCCCCC
Confidence 999873 3345999999999999999999999999987653 578888887753 3467779999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|.+++.+++++|+++|+++|+++|+||+|.+|.+++. .. ..+++++++||||.|++||+|+||+++ .
T Consensus 131 G~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~-----~~-----~~~~vi~~~S~SK~~~l~GlRiG~~v~---~ 197 (311)
T PRK08354 131 GKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE-----SP-----EGENIIKLRTFTKSYGLPGIRVGYVKG---F 197 (311)
T ss_pred CCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc-----cc-----CCCcEEEEeccHhhcCCccceeeeeee---h
Confidence 9999999999999999999999999999999987531 11 246899999999999999999999954 2
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
. +.+...... + ..+..++.++..++++. + +++++.++.+++.++.+.+.+ ..++
T Consensus 198 ~-------~~l~~~~~~-~-~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~l~~~l-----------~~~~ 251 (311)
T PRK08354 198 E-------EAFRSVRMP-W-SIGSTGYAFLEFLIEDD-F-----EHLRKTMPLIWREKERFEKAL-----------YVKS 251 (311)
T ss_pred H-------HHHHHcCCC-c-cCCHHHHHHHHHHHHhH-H-----HHHHHHHHHHHHHHHHHHHhc-----------CCCC
Confidence 2 223332222 2 34445566666665532 1 223344444444444433222 2346
Q ss_pred CcceeeecCC-C-HHHHHHHHhcccEEEcCCC--------cEEEccCChhhHHHHHHHHHHH
Q 012628 403 QIGMFSFTGL-N-KAQSDNMTNKWHVYMTKDG--------RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 403 ~~g~f~~~~l-~-~~~~~~ll~~~gI~v~~gg--------Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
+++||++ .+ + .++++.+. ++||.+.||. ||+++ ..++.++++++|+++
T Consensus 252 ~~~~~~~-~~~~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~ 309 (311)
T PRK08354 252 DANFFIK-DVGDAEKFVEFLK-RNGILVRDCTSFGLPGYIRFSVR--DREENEKLIRALREW 309 (311)
T ss_pred CCcEEEE-ECCCHHHHHHHHH-HCCeEEEecccCCCCCeEEEEeC--CHHHHHHHHHHHHHh
Confidence 7776664 44 3 34566655 4699999983 99998 456778888888765
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=7.9e-33 Score=277.90 Aligned_cols=342 Identities=11% Similarity=0.044 Sum_probs=241.4
Q ss_pred CCCCceeecccccC-CCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 81 TDEKKLNLGVGAYR-TEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 81 ~~~~~i~l~~g~~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
.+.++++|++|+|. |... |.....+.+++.+++..+. ..|++..|.++||+++++++.. +++++ |+|
T Consensus 34 ~g~~~~~L~~g~p~~D~~t-ds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~~~--------~~vv~--t~g 101 (460)
T PRK13238 34 AGYNPFLLKSEDVFIDLLT-DSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIFGY--------PYTIP--THQ 101 (460)
T ss_pred cCCCEEeCCCCCCCCCCCC-CCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHhCC--------CcEEE--CCC
Confidence 45699999999983 2211 1112357777777775554 7899999999999999999743 46888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecC------CCC--CCCHHHHHHHHHcCC-CCc
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP------KTV--GLDFEGMIADIKAAP-GGS 230 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~------~~~--~~d~e~l~~~i~~~~-~~~ 230 (459)
|++++.++ +...+.||| |++++|.|..|...++..|++++.+|+++. +.| .+|++.|++.+++.. +++
T Consensus 102 gt~A~~~~--~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~t 178 (460)
T PRK13238 102 GRAAEQIL--FPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENV 178 (460)
T ss_pred HHHHHHHH--HHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCce
Confidence 99999998 445588999 999999999999999999999999998531 234 499999999998532 368
Q ss_pred EEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCC--CCCCCC---CCChhHHHHHHhcCCeEEEEEcCCc
Q 012628 231 FILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQG--FASGSL---DNDASSVRLFATRGMELLVAQSYSK 304 (459)
Q Consensus 231 ~~ii~~~p~NPTG-~~~s~~~l~~i~~l~~~~~~~ii~Deay~~--~~~~~~---~~~~~~~~~~~~~~~~~i~~~S~SK 304 (459)
+++++++|||||| .+++.+++++|.++|++||+++|+|+++.. ..+... .....++..+ +..++|++|
T Consensus 179 k~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i------~~~~~s~~D 252 (460)
T PRK13238 179 PFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI------AREMFSYAD 252 (460)
T ss_pred eEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH------hhhhcccCc
Confidence 8999999999997 999999999999999999999999997522 222100 0011122221 334467888
Q ss_pred CcccCCCCcc-----eEEEEeCChhHHHHHHHHHHhhccc-cccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 305 NLGLYAERIG-----AMNVVCSSSDLAARVKSQLKRLARP-MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 305 ~~~~~G~RiG-----~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
.+.++|||+| +++ ..+++++.+++.......... ++.+.+...|.+++..|.+. .. .++++. ..+
T Consensus 253 ~~~~Sg~K~g~~~~GG~i-~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~-~~---~~~~~~----~~~ 323 (460)
T PRK13238 253 GLTMSAKKDAMVNIGGLL-CFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEG-MD---EDYLAY----RIG 323 (460)
T ss_pred EEEEecccCCCCcceeEE-EcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHh-hC---hHHHHH----HHH
Confidence 8888888874 332 233456444443221111112 23333444456655444321 11 011122 233
Q ss_pred HHHHHHHHHhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHHHhcccEEEcCCC-------------
Q 012628 379 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG------------- 432 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l-------------~~~~~~~ll~~~gI~v~~gg------------- 432 (459)
++++|.+.|. +.| ++++.|.||+|+|+++ +.+++.+|+++.||.+.|+|
T Consensus 324 ~~~~l~~~L~-~~G----~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~ 398 (460)
T PRK13238 324 QVEYLGEGLE-EAG----VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQ 398 (460)
T ss_pred HHHHHHHHHH-HCC----CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccc
Confidence 5799999999 887 6888999999999854 24578899999999998863
Q ss_pred --------cEEEcc--CChhhHHHHHHHHHHHHhh
Q 012628 433 --------RISLAG--LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 433 --------Ris~~~--~~~e~i~~~~~~l~~~~~~ 457 (459)
|+++.- ++.+++++++++|+++.++
T Consensus 399 ~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 399 LPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred cCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 888764 4889999999999988753
No 110
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=2.8e-32 Score=267.85 Aligned_cols=332 Identities=20% Similarity=0.215 Sum_probs=249.5
Q ss_pred eeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHH
Q 012628 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (459)
Q Consensus 86 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~ 165 (459)
|||+.|.| .+.+ ++.+.+++.+.........|.+..|..++++.+++++...++....++++++ ++|+++++.
T Consensus 1 ~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~--~~~~t~a~~ 73 (350)
T cd00609 1 IDLSIGEP----DFPP-PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVV--TNGAQEALS 73 (350)
T ss_pred CCCCCCCC----CCCC-CHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEE--ecCcHHHHH
Confidence 57888877 3333 4445554443222223467888999999999999999887665555778988 999999999
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCH--HHHHHHHHcCCCCcEEEEeCCCCCCCC
Q 012628 166 LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDF--EGMIADIKAAPGGSFILLHGCAHNPTG 243 (459)
Q Consensus 166 l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~--e~l~~~i~~~~~~~~~ii~~~p~NPTG 243 (459)
.+.. ....+||+|++++|+|.++...++..|.+++.+|+++ ++..+. +.++..+. ++++++++++++||||
T Consensus 74 ~~~~--~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG 146 (350)
T cd00609 74 LLLR--ALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDE--EGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTG 146 (350)
T ss_pred HHHH--HhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEeccc--ccCCccCHHHHHhhcC---ccceEEEEECCCCCCC
Confidence 8833 3356899999999999999999999999999999853 333443 55555443 3677888888999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCCh
Q 012628 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS 323 (459)
Q Consensus 244 ~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~ 323 (459)
.+++.+++++|+++|+++|+++|+|++|..+.+.+.... ........+.+++++|++|.++++|.|+||+++ ++
T Consensus 147 ~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~---~~ 220 (350)
T cd00609 147 AVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPP---ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIA---PP 220 (350)
T ss_pred cccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccc---cccCcCccCcEEEEeecccccCCcccceEEEec---CH
Confidence 999999999999999999999999999998876532111 001123445789999999999999999999955 55
Q ss_pred -hHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC
Q 012628 324 -DLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR 402 (459)
Q Consensus 324 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 402 (459)
++.+.+.. .....+.+++..++.++..+|.... +.+++.+++++++++++.+.|+ +.+. +....+
T Consensus 221 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~ 286 (350)
T cd00609 221 EELLERLKK----LLPYTTSGPSTLSQAAAAAALDDGE------EHLEELRERYRRRRDALLEALK-ELGP---LVVVKP 286 (350)
T ss_pred HHHHHHHHH----HHHhcccCCChHHHHHHHHHHhCcH------HHHHHHHHHHHHHHHHHHHHHH-hcCC---ccccCC
Confidence 64444433 3333345777888888877777542 3367888999999999999999 8753 222456
Q ss_pred CcceeeecCCC----HHHHHHHHhcccEEEcCC------C----cEEEccCChhhHHHHHHHHH
Q 012628 403 QIGMFSFTGLN----KAQSDNMTNKWHVYMTKD------G----RISLAGLSLAKCEYLADAII 452 (459)
Q Consensus 403 ~~g~f~~~~l~----~~~~~~ll~~~gI~v~~g------g----Ris~~~~~~e~i~~~~~~l~ 452 (459)
.+|+++|+.+. .+.+.++++++||.+.++ + ||+++.. ++++++++++|+
T Consensus 287 ~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 287 SGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred CccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 77889888653 456777888789999886 3 9999985 999999999986
No 111
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-30 Score=232.29 Aligned_cols=354 Identities=16% Similarity=0.118 Sum_probs=251.0
Q ss_pred cchhHHHhh-hCCCCCceeecccccCCCCCCccCcHHHHHHH----HHHhhcC----CCCCCCCCcccHHHHHHHHHHHh
Q 012628 70 ILGVSEAFK-ADTDEKKLNLGVGAYRTEELQPYVLDVVKKAE----NLMLERG----ENKEYLPIEGLAAFNKVTAELLF 140 (459)
Q Consensus 70 i~~~~~~~~-~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~----~~~~~~~----~~~~Y~~~~g~~~lr~aia~~l~ 140 (459)
|..+++.+. .-..++.|.|+.|.| .. -|++.+.. .+.+.++ ...+|...+|...|.++++.+++
T Consensus 16 i~~lMdDl~d~Lrt~g~imLggGNP----a~---iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~ 88 (417)
T COG3977 16 ITQLMDDLNDGLRTPGAIMLGGGNP----AR---IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLR 88 (417)
T ss_pred HHHHHHHHHhhccCCCceeeCCCCc----cc---ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHH
Confidence 455554442 112467999999987 32 34454444 4444332 23689999999999999999999
Q ss_pred cCCCCccccCceEEeecccchhHHHHHHHHHHHhC-CCC--EEEE-cCCCCcchHHHhh------hCCCCeeeeeeecCC
Q 012628 141 GADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGA--KVLI-SSPTWGNHKNIFN------DARVPWSEYRYYDPK 210 (459)
Q Consensus 141 ~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~-~gd--~Vlv-~~p~y~~~~~~~~------~~G~~v~~v~~~~~~ 210 (459)
+.+|..+++++|.+ |+|++.+..-++.+++... .|+ +|+. ..|.|.+|..+.- ++.-++..+|-. .-
T Consensus 89 ~~ygwnit~~NIal--TnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g-~F 165 (417)
T COG3977 89 REYGWNITAQNIAL--TNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAG-QF 165 (417)
T ss_pred HHhCCCCccceeee--cCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCccccccc-ce
Confidence 99999999999999 9999999888755554333 443 4444 4688888865422 111112222210 11
Q ss_pred CCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC-CChhHHHHH
Q 012628 211 TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD-NDASSVRLF 289 (459)
Q Consensus 211 ~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~-~~~~~~~~~ 289 (459)
-+.+|++.+.- .+ .+-+++++-|.||||.+++.+++.+|..+|++||+.+|+|.+|.---.+ .. .|.. .
T Consensus 166 KY~vDF~~l~i--~e---~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~-iifsd~~---~- 235 (417)
T COG3977 166 KYHVDFEHLHI--GE---STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPG-IIFSDAT---P- 235 (417)
T ss_pred eeccCHHHccc--cc---ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCc-eeccccc---c-
Confidence 35678888753 33 6678888999999999999999999999999999999999998643211 10 0110 0
Q ss_pred HhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012628 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 369 (459)
Q Consensus 290 ~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~ 369 (459)
--.++++.|.|+||. |+||.|+|.+++ +++ +++.+..........+...++.+++.+++.+++.+.- -
T Consensus 236 -~w~~NiilC~SLSK~-GLPG~R~GIiIa---ne~----viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rls---e 303 (417)
T COG3977 236 -LWNENIILCMSLSKL-GLPGSRCGIIIA---NEK----VIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLS---E 303 (417)
T ss_pred -cCCCCEEEEeehhhc-CCCCcceeEEEc---cHH----HHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHH---H
Confidence 113689999999996 789999999877 887 6666665555555678888999999999988875321 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeec-----CCCHHHHHHHHhcccEEEcCCC------------
Q 012628 370 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT-----GLNKAQSDNMTNKWHVYMTKDG------------ 432 (459)
Q Consensus 370 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~-----~l~~~~~~~ll~~~gI~v~~gg------------ 432 (459)
+-++-.|+++.+...+.|++.++- ..|..+.|+|.+|+|+ .++.+.+...+++.||.++||.
T Consensus 304 qVIrPFY~~~~q~~~~~l~~~lp~-~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH 382 (417)
T COG3977 304 QVIRPFYRNRVQTTIAILRRYLPE-YRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPH 382 (417)
T ss_pred HhhhHHHHHHHHHHHHHHHHhcCc-cceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCC
Confidence 345667777777777777733432 2267789999999987 2355554444455699999982
Q ss_pred -----cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 433 -----RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 433 -----Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
|+|+.. ++++|+.++.+|.+.+++
T Consensus 383 ~hqC~Rmn~~~-~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 383 THQCMRMNYVP-EPEKIEKGVAILAEEVER 411 (417)
T ss_pred ccceEEEecCC-CHHHHHHHHHHHHHHHHH
Confidence 999998 899999999999998875
No 112
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=1e-29 Score=234.35 Aligned_cols=335 Identities=17% Similarity=0.138 Sum_probs=254.5
Q ss_pred cHHHHHHHHHHhhc--CCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEE
Q 012628 103 LDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV 180 (459)
Q Consensus 103 ~~~v~~a~~~~~~~--~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~V 180 (459)
|..+++.....+.. +....|+...|++-+|+.+|+|+.+++|.+.+|++|.+ |.|++.|+..+..++- -.+.+.|
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~L--T~GAS~ai~~il~l~~-~~~~~Gv 164 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFL--TTGASPAIRSILSLLI-AGKKTGV 164 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeee--cCCCcHHHHHHHHHHh-cCCCCce
Confidence 34444444455533 24467999999999999999999999998899999999 9999999999855541 2378999
Q ss_pred EEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 012628 181 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 258 (459)
Q Consensus 181 lv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~--~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~ 258 (459)
++|-|.|+-|...+..+|+..+.+-++++.+|.+|.++|+..++++ .-+.+++++-||.||||.++|++-+++|+++|
T Consensus 165 liPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa 244 (475)
T KOG0258|consen 165 LIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFA 244 (475)
T ss_pred EeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHH
Confidence 9999999999999999999999998988899999999999888763 23456777789999999999999999999999
Q ss_pred HhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh-c---C---CeEEEEEcCCcCc-ccCCCCcceEEEEeCChhHHHHHH
Q 012628 259 QEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-R---G---MELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVK 330 (459)
Q Consensus 259 ~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~-~---~---~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~ 330 (459)
.+++++++.||+||+-.|.+ +....+.+..+- . . .-++.++|.||.+ |=.|.|=||+-++..+++..+.+.
T Consensus 245 ~~~~l~llaDEVYQ~Nvy~~-~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~ 323 (475)
T KOG0258|consen 245 AEEGLVLLADEVYQDNVYTT-GSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIK 323 (475)
T ss_pred HHcCeEEechHHHHhhccCC-CcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHH
Confidence 99999999999999999864 223444433321 1 1 2456778889986 557899999987777777444433
Q ss_pred HHHHhhccccccCCchHHHHHHHHHhCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcce
Q 012628 331 SQLKRLARPMYSNPPVHGARIVANVVGNP----ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGM 406 (459)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~ 406 (459)
+.... -.+++..+|..+-...+-+ .-++.|..+-+.+.+.++++...+.+.++ ++. ++++.+++|.|
T Consensus 324 Kl~si-----~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~n-s~~---gi~cn~~qGAM 394 (475)
T KOG0258|consen 324 KLASI-----KLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFN-SLE---GISCNPVQGAM 394 (475)
T ss_pred HHHhh-----hhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHh-hcC---ceeeccCccce
Confidence 32221 2255566666665555422 12345667778888999999999999999 773 27899999999
Q ss_pred eeecCC---------------C-HHH-HHHHHhcccEEEcCCC-----------cEEEccCChhhHHHHHHHHHHH
Q 012628 407 FSFTGL---------------N-KAQ-SDNMTNKWHVYMTKDG-----------RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 407 f~~~~l---------------~-~~~-~~~ll~~~gI~v~~gg-----------Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
|+|..+ . ++| +.+||+..||.++||. |.+|-... + ..+++++++
T Consensus 395 Y~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~---~-~~i~~~~~f 466 (475)
T KOG0258|consen 395 YLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG---L-EIIEKFKKF 466 (475)
T ss_pred eecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch---h-HHHHHHHHH
Confidence 999743 2 234 6799999999999982 88876422 3 555555444
No 113
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=3.7e-29 Score=247.90 Aligned_cols=340 Identities=12% Similarity=0.106 Sum_probs=233.9
Q ss_pred CCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 81 TDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 81 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
.+-+++.|..|.++-+...+.....+.+++..++..+. ..|++..|.++|++++++++.. +++++ |+||
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g~--------~~vv~--t~~G 77 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFGF--------KHIIP--THQG 77 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHCC--------CeEEE--cCCH
Confidence 35688999999873222222112455555555554444 5699999999999999999743 56888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCC--------CCCCCHHHHHHHHHcC-CCCcE
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPK--------TVGLDFEGMIADIKAA-PGGSF 231 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~--------~~~~d~e~l~~~i~~~-~~~~~ 231 (459)
++|+.++ +...+.|||.| +++|+|..+...+..+|++++.++++++. .+.+|++.|++.+++. .++++
T Consensus 78 t~Al~la--~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~ 154 (431)
T cd00617 78 RGAENIL--FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIP 154 (431)
T ss_pred HHHHHHH--HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCcc
Confidence 9999998 44557899987 68999999999999999999999996432 2449999999999863 23477
Q ss_pred EEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCC--CC-----CCCCCChhHHHHHHhcCCeEEEEEcCC
Q 012628 232 ILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF--AS-----GSLDNDASSVRLFATRGMELLVAQSYS 303 (459)
Q Consensus 232 ~ii~~~p~NPT-G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~--~~-----~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (459)
++++++||||+ |.+++.+++++|.++|++||++||+|++.... .+ ++ ....++.. .++.++|++
T Consensus 155 ~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g--~~~~si~e------i~~e~~s~s 226 (431)
T cd00617 155 YIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEG--YRDKSIAE------IAREMFSYA 226 (431)
T ss_pred EEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhccccc--ccCCCHHH------HHHHhhccC
Confidence 88889999998 99999999999999999999999999993211 11 10 01112221 234556888
Q ss_pred cCcccCCCC-----cc-eEEEEeCChhHHHHHHHHHHhhcccc-ccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012628 304 KNLGLYAER-----IG-AMNVVCSSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 376 (459)
Q Consensus 304 K~~~~~G~R-----iG-~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 376 (459)
|.+.+.|+| +| |++ .+++++.+++........... +.+.+.....+++..|.+.. + .+...+++
T Consensus 227 d~~~mS~~K~~~~~~GG~i~--~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~------~-~~~l~~~~ 297 (431)
T cd00617 227 DGCTMSAKKDGLVNIGGFLA--LRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV------E-EDYLRHRV 297 (431)
T ss_pred CEEEEEeecCCCCccceEEE--eCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc------c-HHHHHHHH
Confidence 888888887 45 663 444566555443221111111 11222222222232343210 0 12334444
Q ss_pred HHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHHHhcccEEEcCC-----------C
Q 012628 377 KNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKD-----------G 432 (459)
Q Consensus 377 ~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l-------------~~~~~~~ll~~~gI~v~~g-----------g 432 (459)
+ ++++|.+.|. +.| |.+..|.||+++|++. +.+++.+|+++.||.+..- |
T Consensus 298 ~-~r~~l~~~L~-~~G----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~ 371 (431)
T cd00617 298 E-QVRYLGDRLD-EAG----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTG 371 (431)
T ss_pred H-HHHHHHHHHH-HCC----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCC
Confidence 4 5599999999 888 6888999999999854 2355778999899986541 1
Q ss_pred ----------cEEEc--cCChhhHHHHHHHHHHHHhh
Q 012628 433 ----------RISLA--GLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 433 ----------Ris~~--~~~~e~i~~~~~~l~~~~~~ 457 (459)
|+++. .+|.+++++++++|..+.++
T Consensus 372 ~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 372 ENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 88765 34889999999999998875
No 114
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=5.4e-29 Score=248.99 Aligned_cols=328 Identities=13% Similarity=0.096 Sum_probs=219.7
Q ss_pred ccCCCCCCccCcHHHHHHHHHHhhcCC-CCCCCCC-------cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 92 AYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 92 ~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~-------~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
.|+|..+..++|+.+.+++.+.+.... ...+.+. ..++++|+.++++++.. ++++|++ |+|+|++
T Consensus 18 iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~--t~g~t~~ 90 (398)
T TIGR03392 18 VYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAP-----DAENIVW--TRGTTES 90 (398)
T ss_pred EEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCChHHH
Confidence 344444555568999999988874311 1122221 23567999999997653 2678999 9999999
Q ss_pred HHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCC
Q 012628 164 LRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (459)
Q Consensus 164 ~~l~~~~~~--~~~~gd~Vlv~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~ 237 (459)
+++++..+. .+.+||+|++++|.|+. +...++..|++++.+|++ .++.+|++.+++++++ +++++++++
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~---~t~lv~i~~ 165 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG--ADLLPDIRQLPELLTP---RTRILALGQ 165 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHHhcc---CceEEEEEC
Confidence 999844331 14689999999999865 455678899999999984 3567899999999976 788999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEE
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (459)
||||||.+. ++++|+++|+++|+++++|++|..... .. .+ ...+.++++.|++|.+|++| +||++
T Consensus 166 ~~n~tG~~~---~~~~i~~~~~~~~~~~ivD~a~~~~~~-~~-----~~----~~~~~d~~~~s~~K~~gp~G--~G~l~ 230 (398)
T TIGR03392 166 MSNVTGGCP---DLARAITLAHQYGAVVVVDGAQGVVHG-PP-----DV----QALDIDFYAFSGHKLYGPTG--IGVLY 230 (398)
T ss_pred ccccccccC---CHHHHHHHHHHcCCEEEEEhhhhcCCC-CC-----Ch----hhcCCCEEEEecccccCCCc--eEEEE
Confidence 999999994 577899999999999999999754322 11 11 12234678889999999777 89997
Q ss_pred EEeCChhHHHHHHHHHHhh-----------------ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012628 318 VVCSSSDLAARVKSQLKRL-----------------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 380 (459)
Q Consensus 318 ~v~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 380 (459)
+ +++.++.+....... .+...++++..+..++...++ +.. ...+++++++.++.+
T Consensus 231 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~---~l~--~~g~~~i~~~~~~l~ 302 (398)
T TIGR03392 231 G---KTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALE---WLT--DIDIAAAEAWSVSLA 302 (398)
T ss_pred E---cHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHH---HHH--HhCHHHHHHHHHHHH
Confidence 6 677444332110000 000111233323222222221 111 112456778888899
Q ss_pred HHHHHHHhhccCCCCCccccc-CCcceeee--cCCCHHHHHHHHhcccEEEcCC--------------C--cEEEccC-C
Q 012628 381 QKLFDSLSAKDKSGKDWSFIL-RQIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAGL-S 440 (459)
Q Consensus 381 ~~l~~~L~~~~g~~~~~~~~~-~~~g~f~~--~~l~~~~~~~ll~~~gI~v~~g--------------g--Ris~~~~-~ 440 (459)
+++.+.|+ +++ ++.... +..+++.| .+++.+.+...++++||.+++| | |||++.. |
T Consensus 303 ~~l~~~l~-~l~---g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t 378 (398)
T TIGR03392 303 DLAEERLA-QLP---GFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT 378 (398)
T ss_pred HHHHHHHh-cCC---CeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCC
Confidence 99999998 762 144443 33344433 2455555444455679998753 3 9998765 8
Q ss_pred hhhHHHHHHHHHHHHhhc
Q 012628 441 LAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 441 ~e~i~~~~~~l~~~~~~~ 458 (459)
++|+++++++|+++++++
T Consensus 379 ~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 379 QQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 899999999999998875
No 115
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=4e-29 Score=250.24 Aligned_cols=327 Identities=15% Similarity=0.123 Sum_probs=221.7
Q ss_pred ccCCCCCCccCcHHHHHHHHHHhhcCCCC--CCC------CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 92 AYRTEELQPYVLDVVKKAENLMLERGENK--EYL------PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 92 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~------~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
.|+|..+..+.++.+.+++.+.+...... ... ....++++|+.++++++.. ++++|++ |+|+|++
T Consensus 21 ~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~-----~~~~i~~--~~~~t~~ 93 (401)
T PRK10874 21 VYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAP-----DAKNIVW--TRGTTES 93 (401)
T ss_pred EEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE--ECCHHHH
Confidence 34455555566899999999888532100 000 0223678999999997652 2788999 9999999
Q ss_pred HHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCC
Q 012628 164 LRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (459)
Q Consensus 164 ~~l~~~~~~--~~~~gd~Vlv~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~ 237 (459)
+++++..+. .+.+||+|++++|.|+. +...++..|++++.+|.+ .++.+|++++++.+++ +++++++++
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~---~t~lv~i~~ 168 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLG--ADRLPDVDLLPELITP---RTRILALGQ 168 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecC--CCCcCCHHHHHHhcCc---CcEEEEEeC
Confidence 999854432 24699999999999864 556667889999999983 4578999999999975 788999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEE
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (459)
|+||||.++ ++++|+++|+++|+++|+|++|.. +..+. .+ ...+.++++.|++|.+|++| +||++
T Consensus 169 ~~n~tG~~~---~~~~i~~l~~~~g~~~ivD~a~~~-g~~~~-----~~----~~~~~d~~~~s~~K~~gp~G--~G~l~ 233 (401)
T PRK10874 169 MSNVTGGCP---DLARAITLAHQAGMVVMVDGAQGA-VHFPA-----DV----QALDIDFYAFSGHKLYGPTG--IGVLY 233 (401)
T ss_pred CcccccCcC---CHHHHHHHHHHcCCEEEEECCccc-ccccC-----Cc----hhcCCCEEEEecccccCCCc--cEEEE
Confidence 999999995 567899999999999999999643 22111 11 12235688899999999888 69987
Q ss_pred EEeCChhHHHHHHHHHHh-----------------hccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012628 318 VVCSSSDLAARVKSQLKR-----------------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 380 (459)
Q Consensus 318 ~v~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 380 (459)
+ +++.++.+...... ..+...++++..++.++...++ +.. ....++..++.++.+
T Consensus 234 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~---~l~--~~g~~~~~~~~~~l~ 305 (401)
T PRK10874 234 G---KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALE---WLA--DIDINQAESWSRSLA 305 (401)
T ss_pred E---chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHH---HHH--HhCHHHHHHHHHHHH
Confidence 6 77744433211000 0001112334333333333331 111 112355778888889
Q ss_pred HHHHHHHhhcc-CCCCCccccc-CCcceeee--cCCCHHHHHHHHhcccEEEcCC--------------C--cEEEccC-
Q 012628 381 QKLFDSLSAKD-KSGKDWSFIL-RQIGMFSF--TGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAGL- 439 (459)
Q Consensus 381 ~~l~~~L~~~~-g~~~~~~~~~-~~~g~f~~--~~l~~~~~~~ll~~~gI~v~~g--------------g--Ris~~~~- 439 (459)
+++.+.|+ ++ | +.... +..+++.| .+++.+.+...|+++||.+.+| | |||++.+
T Consensus 306 ~~l~~~l~-~~~g----~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~n 380 (401)
T PRK10874 306 TLAEDALA-KLPG----FRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYN 380 (401)
T ss_pred HHHHHHHh-cCCC----EEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccC
Confidence 99999998 76 4 44443 34444333 2445555545555679998762 3 9999866
Q ss_pred ChhhHHHHHHHHHHHHhhc
Q 012628 440 SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 440 ~~e~i~~~~~~l~~~~~~~ 458 (459)
+++|++.++++|+++++.+
T Consensus 381 t~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 381 TQSDVDALVNAVDRALELL 399 (401)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8899999999999988764
No 116
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=2e-29 Score=238.97 Aligned_cols=326 Identities=17% Similarity=0.088 Sum_probs=241.8
Q ss_pred ccCCCCCCccCcHHHHHHHHHHhhcCC-----CCCCC--CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHH
Q 012628 92 AYRTEELQPYVLDVVKKAENLMLERGE-----NKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (459)
Q Consensus 92 ~~~~~~~~~~~~~~v~~a~~~~~~~~~-----~~~Y~--~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~ 164 (459)
.|+|++..+++.|+|.++|..++.... .+.|+ ....+++.|+.||+.++.+ +++|++ |+||||++
T Consensus 3 iYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~------~~eIiF--TSG~TEsn 74 (386)
T COG1104 3 IYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGAD------PEEIIF--TSGATESN 74 (386)
T ss_pred ccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--ecCCcHHH
Confidence 477888888889999999999885421 12222 2345688999999998765 789999 99999999
Q ss_pred HHHHHHHHHhC----CCCEEEEcCCCCcchHHHhhh---CCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCC
Q 012628 165 RLAAALIERYF----PGAKVLISSPTWGNHKNIFND---ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (459)
Q Consensus 165 ~l~~~~~~~~~----~gd~Vlv~~p~y~~~~~~~~~---~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~ 237 (459)
+++.+...... .|.+|+++.--++...+.++. .|++|.++|+ +.++.+|+++|+++|++ +|.++.++.
T Consensus 75 NlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V--~~~G~v~~e~L~~al~~---~T~LVSim~ 149 (386)
T COG1104 75 NLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPV--DSNGLVDLEQLEEALRP---DTILVSIMH 149 (386)
T ss_pred HHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCC--CCCCeEcHHHHHHhcCC---CceEEEEEe
Confidence 99965522222 467788877676666555554 5999999999 45789999999999997 899999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEE
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (459)
.||.||++ +++++|+++|+++++++++|.+ |.++--+. .+...+-++...|-+|.+|+.| +|+++
T Consensus 150 aNnE~G~I---QpI~ei~~i~k~~~i~fHvDAv-Qa~Gkipi---------~~~~~~vD~ls~SaHK~~GpkG--iGaLy 214 (386)
T COG1104 150 ANNETGTI---QPIAEIGEICKERGILFHVDAV-QAVGKIPI---------DLEELGVDLLSFSAHKFGGPKG--IGALY 214 (386)
T ss_pred cccCeeec---ccHHHHHHHHHHcCCeEEEehh-hhcCceec---------cccccCcceEEeehhhccCCCc--eEEEE
Confidence 99999999 9999999999999999999999 87773221 1233346788889999999999 89997
Q ss_pred EEeCChhHHHHHHHH--HHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012628 318 VVCSSSDLAARVKSQ--LKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 395 (459)
Q Consensus 318 ~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 395 (459)
+ ++......++.. ..+..|..+.+.+.+.....+.-+. .++++....++..+|++|.+.|. +.. |.
T Consensus 215 v--~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a--------~~~~~~~~~~~~~lr~~l~~~l~-~~~-p~ 282 (386)
T COG1104 215 V--RPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIA--------VEELEEENARLRKLRDRLEDGLL-EII-PD 282 (386)
T ss_pred E--CCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHH-hcC-Cc
Confidence 5 222222222221 2333445555666554333322111 34567788889999999999998 641 11
Q ss_pred Ccc------cccCCcceeeecCCCHHHHHHHHhcccEEEcCC-----------------C----------cEEEccC-Ch
Q 012628 396 DWS------FILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-----------------G----------RISLAGL-SL 441 (459)
Q Consensus 396 ~~~------~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~g-----------------g----------Ris~~~~-~~ 441 (459)
+. ...|+.-.|.|.++..+.+...++.+||++..| | ||||+.. ++
T Consensus 283 -~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~ 361 (386)
T COG1104 283 -VYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTE 361 (386)
T ss_pred -EEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCH
Confidence 11 223444567788999999888888899999887 1 9999876 78
Q ss_pred hhHHHHHHHHHHHHhhc
Q 012628 442 AKCEYLADAIIDSYHNV 458 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~~ 458 (459)
+|++++++++.++++++
T Consensus 362 eei~~~~~~l~~~i~~l 378 (386)
T COG1104 362 EEIDAAAEALKEIIKRL 378 (386)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999875
No 117
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=9.2e-28 Score=239.87 Aligned_cols=326 Identities=10% Similarity=0.092 Sum_probs=223.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCc---cc----HHHHHHHHHHHhcCCCCccccCceEE
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---GL----AAFNKVTAELLFGADNSVLKEQRVAT 154 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~---g~----~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (459)
+.++|||+.|.|+ +.+. +|++.+++.+.+.+.. ..|++.. |. .++++++|+++.. +++++
T Consensus 37 g~~~i~~~~~~~l---g~~~-~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g~--------~~~ii 103 (393)
T TIGR01822 37 GREVLNFCANNYL---GLSS-HPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLGT--------EDTIL 103 (393)
T ss_pred CceEEEeeCCCcc---ccCC-CHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhCC--------CcEEE
Confidence 4579999999875 4443 7888998888876421 3555554 65 8899999999754 34666
Q ss_pred eecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC---CCCcE
Q 012628 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSF 231 (459)
Q Consensus 155 ~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~ 231 (459)
++||++|+..+ +...+.+||+|++++|+|+.+...++..+.+.+.++ .+|++.+++.+++. ..+++
T Consensus 104 --~~~~~~a~~~~--~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 104 --YASCFDANGGL--FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred --ECchHHHHHHH--HHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCce
Confidence 68899999987 344478999999999999999988888887764432 36899999998752 12678
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh-cCCeEEEEEcCCcCcccCC
Q 012628 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYA 310 (459)
Q Consensus 232 ~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G 310 (459)
++++++++||||.+ .++++|+++|++||+++|+||+|. +++.+. ...+.....+ ..+.+++++|+||.++ |
T Consensus 173 ~v~~~~v~~~tG~~---~~l~~i~~la~~~~~~li~De~~~-~g~~~~--~~~~~~~~~~~~~~~di~~~s~sK~l~--g 244 (393)
T TIGR01822 173 LIATDGVFSMDGVI---APLDEICDLADKYDALVMVDECHA-TGFLGP--TGRGSHELCGVMGRVDIITGTLGKALG--G 244 (393)
T ss_pred EEEEeCCccCCCCc---CCHHHHHHHHHHcCCEEEEECCcc-ccCcCC--CCCchHHhcCCCCCCeEEEEEChHHhh--C
Confidence 88888899999999 568899999999999999999984 332111 1111111222 1245799999999864 7
Q ss_pred CCcceEEEEeCChhHHHHHHHHHHhhccccccC-CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012628 311 ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSN-PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 389 (459)
Q Consensus 311 ~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 389 (459)
+|+||+++ +++..+.+...... ..+.+ .+...+.++...|+ + .+..++.+++++++++++.+.|+
T Consensus 245 ~r~G~~~~---~~~~~~~l~~~~~~---~~~~~~~~~~~~~a~~~al~---~----~~~~~~~~~~~~~~~~~l~~~L~- 310 (393)
T TIGR01822 245 ASGGFTTA---RKEVVELLRQRSRP---YLFSNSLPPAVVGASIKVLE---M----LEASNELRDRLWANTRYFRERME- 310 (393)
T ss_pred CCcEEEEe---CHHHHHHHHHhCcc---ceecCCCCHHHHHHHHHHHH---H----HhcCHHHHHHHHHHHHHHHHHHH-
Confidence 89999866 78855555432111 11222 22222223333331 1 11245678899999999999998
Q ss_pred ccCCCCCcccccCCcceeeec--C-C-CHHHHHHHHhcccEEEcC-------CC----cEEEccC-ChhhHHHHHHHHHH
Q 012628 390 KDKSGKDWSFILRQIGMFSFT--G-L-NKAQSDNMTNKWHVYMTK-------DG----RISLAGL-SLAKCEYLADAIID 453 (459)
Q Consensus 390 ~~g~~~~~~~~~~~~g~f~~~--~-l-~~~~~~~ll~~~gI~v~~-------gg----Ris~~~~-~~e~i~~~~~~l~~ 453 (459)
+.| +.+..+.+.++.+. + . ..++++.|+++ ||.+.. .+ ||+++.. +++++++++++|.+
T Consensus 311 ~~g----~~~~~~~~~~~~i~~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 311 AAG----FDIKPADHPIIPVMLYDAVLAQRFARRLLEE-GIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred HcC----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHC-CeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 776 45544454444322 1 1 23456677765 998862 12 7777654 79999999999999
Q ss_pred HHhhc
Q 012628 454 SYHNV 458 (459)
Q Consensus 454 ~~~~~ 458 (459)
+++++
T Consensus 386 ~~~~~ 390 (393)
T TIGR01822 386 IGREL 390 (393)
T ss_pred HHHHh
Confidence 88764
No 118
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=2.5e-28 Score=238.42 Aligned_cols=316 Identities=13% Similarity=0.022 Sum_probs=209.3
Q ss_pred eeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHH
Q 012628 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (459)
Q Consensus 86 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~ 165 (459)
|||+..+. |.++|.+.+++.+... + ...|+|..+..+|+++++++++. +.+++ +.||++++.
T Consensus 2 ~~~~~~~~------~~p~~~~~~a~~~~~~-~-~~~Y~~~~~~~~L~~~la~~~g~--------~~~~v--~~~g~~a~~ 63 (333)
T PRK10534 2 IDLRSDTV------TRPSRAMLEAMMAAPV-G-DDVYGDDPTVNALQDYAAELSGK--------EAALF--LPTGTQANL 63 (333)
T ss_pred cccccccC------CCCCHHHHHHHHhccC-C-CcccCCCHHHHHHHHHHHHHhCC--------CeEEE--eCchHHHHH
Confidence 56665543 3348999999877543 3 36788888999999999999642 23345 788888877
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCcc-hHHH-hhhCC-CCeeeeeeecCCCCCCCHHHHHHHHHcCC---CCcEEEEeCCCC
Q 012628 166 LAAALIERYFPGAKVLISSPTWGN-HKNI-FNDAR-VPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFILLHGCAH 239 (459)
Q Consensus 166 l~~~~~~~~~~gd~Vlv~~p~y~~-~~~~-~~~~G-~~v~~v~~~~~~~~~~d~e~l~~~i~~~~---~~~~~ii~~~p~ 239 (459)
++ +...+.+||+|+++.|+|.. |... ....| ++++.+++ ++++.+|++++++++++.. .+++++++|||+
T Consensus 64 ~~--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~ 139 (333)
T PRK10534 64 VA--LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA--AADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH 139 (333)
T ss_pred HH--HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecC--CCCCCCCHHHHHHhhcccCcCcccceEEEEecCC
Confidence 76 44457799999999888753 4321 23333 67777776 3468899999999886410 146788888655
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcce-EEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA-MNV 318 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~-~~~ 318 (459)
||.+++.+++++|+++|++|++++++||+|.......... ....+....++++ .||||.||++ +|| +++
T Consensus 140 --~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~---~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~ 209 (333)
T PRK10534 140 --NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGC---ELKEITQYCDSFT--ICLSKGLGTP---VGSLLVG 209 (333)
T ss_pred --CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCC---CHHHHHhcCCEEE--EEeEcCCCCc---ccceEEc
Confidence 6999999999999999999999999999976221100001 1112222123333 4899998864 784 544
Q ss_pred EeCChhHHHHHHHHHHhhcccccc--CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 012628 319 VCSSSDLAARVKSQLKRLARPMYS--NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 396 (459)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 396 (459)
+++.++.+..... .... +....+|.++...|++. .+..++..+.++++.+.|+ ++|
T Consensus 210 ---~~~~i~~~~~~~~----~~~~~~~~~~~~~a~~~~~l~~~----------~~~~~~~~~~r~~l~~~L~-~~g---- 267 (333)
T PRK10534 210 ---NRDYIKRARRWRK----MTGGGMRQAGILAAAGLYALKHN----------VARLQEDHDNAAWLAEQLR-EAG---- 267 (333)
T ss_pred ---CHHHHHHHHHHHH----HhCCchhhHHHHHHHHHHHHHhh----------HHHHHHHHHHHHHHHHHHH-hCC----
Confidence 8886555543222 1111 22234455544444320 1222234446789999999 887
Q ss_pred cccccCCcceeeecCCC---HHHHHHHHhcccEEEcCCC--cEEEc-cCChhhHHHHHHHHHHHHh
Q 012628 397 WSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG--RISLA-GLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 397 ~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~gg--Ris~~-~~~~e~i~~~~~~l~~~~~ 456 (459)
+++.++ +++|+|+.+. .+.+.++++++||.++|+. |++.. ..++|++++++++|++++.
T Consensus 268 ~~~~~~-~~nfv~~~~~~~~~~~~~~~l~~~gi~v~~~~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 268 ADVMRQ-DTNMLFVRVGEEQAAALGEYMRERNVLINASPIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CccCCC-CceEEEEECCchhHHHHHHHHHHcCeeecCCceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 566766 4778888663 3445566666799999986 88653 2489999999999998764
No 119
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.96 E-value=1.9e-27 Score=231.48 Aligned_cols=293 Identities=15% Similarity=0.128 Sum_probs=206.5
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEE
Q 012628 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv 182 (459)
.|.+.++..+.++.- . ++..-..+|++.+|+++.. +++++++ ++||++++..+ +.+.+.+||+|++
T Consensus 35 ~~~~~~~~~~~~~~~--~--g~~~~~~~Le~~lA~~~g~------~~e~ilv--~~gg~~a~~~~--~~al~~~gd~Vli 100 (346)
T TIGR03576 35 GFKIDEEDLELLETY--V--GPAIFEEKVQELGREHLGG------PEEKILV--FNRTSSAILAT--ILALEPPGRKVVH 100 (346)
T ss_pred ChhHHHHHHHHHHHh--c--CCHHHHHHHHHHHHHHcCC------CcceEEE--ECCHHHHHHHH--HHHhCCCCCEEEE
Confidence 688888888877441 1 2334456777777777543 2688999 99999999998 4555779999997
Q ss_pred c---CCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 012628 183 S---SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (459)
Q Consensus 183 ~---~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~ 259 (459)
+ .|+|..|...++..|++++.+ .|++.++. . ++++++++ +++||+|.+++.+++++|+++|+
T Consensus 101 ~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~----~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~ 165 (346)
T TIGR03576 101 YLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I----DGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAK 165 (346)
T ss_pred CCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C----cCceEEEE-ECCCCCCcccCHHHHHHHHHHHH
Confidence 5 478888888899999875322 14454322 1 24566665 45799999999999999999999
Q ss_pred hcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccc
Q 012628 260 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP 339 (459)
Q Consensus 260 ~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~ 339 (459)
+||+++++||+|..+..+.... . ... ... ..+++.|||| +++|+|+||+++ +++.++. +....+.
T Consensus 166 ~~~~~livDEAy~~~~~~~~~~-~-~~~---~~~-~divv~s~SK--alaG~r~G~v~~---~~~li~~----l~~~~~~ 230 (346)
T TIGR03576 166 SKEAIVLVDDASGARVRRLYGQ-P-PAL---DLG-ADLVVTSTDK--LMDGPRGGLLAG---RKELVDK----IKSVGEQ 230 (346)
T ss_pred HcCCEEEEECCccccccccCCC-C-CHH---HcC-CcEEEeccch--hccccceEEEEe---CHHHHHH----HHHhhcC
Confidence 9999999999998765321111 1 111 112 2366779999 578999999876 8884444 4443333
Q ss_pred cccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCC----HH
Q 012628 340 MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLN----KA 415 (459)
Q Consensus 340 ~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~----~~ 415 (459)
...+.+.+.|.++...|+... .+..++.++++++.+.+.++ .++ +.++.++ |+|+.++ .+
T Consensus 231 ~~~s~~~~~~~aa~~aL~~~~--------~~~~~~~l~~r~~~~~~~l~-~~~------~~~~~~~-f~~~~~~~~~~~~ 294 (346)
T TIGR03576 231 FGLEAQAPLLAAVVRALEEFE--------LSRIRDAFKRKEEVYLRLFD-KLN------VERTPTG-FVIKGVEEEKLIE 294 (346)
T ss_pred cccCccHHHHHHHHHHHhhcc--------HHHHHHHHHHHHHHHHHHHH-hCC------CCcCCCe-EEEEeCCCCCHHH
Confidence 332456667777777775421 24567888888888888887 553 3444555 7888663 36
Q ss_pred HHHHHHhcccEEEcCC-------C--cEEEccCChh---hHHHHHHHHHHHHh
Q 012628 416 QSDNMTNKWHVYMTKD-------G--RISLAGLSLA---KCEYLADAIIDSYH 456 (459)
Q Consensus 416 ~~~~ll~~~gI~v~~g-------g--Ris~~~~~~e---~i~~~~~~l~~~~~ 456 (459)
++.++++++||.++|+ | |||++. +++ +++.++++|++.++
T Consensus 295 ~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~-~~~~~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 295 IGLDLLRNYGIITITAVGMPGASKTLRFDLAA-KDAERIGDDYLVEAVKDSLK 346 (346)
T ss_pred HHHHHHHhCCEEEeCCcccCCCCCeEEEEEec-ChHHhcCHHHHHHHHHhccC
Confidence 7889998899999995 2 999996 444 79999999987653
No 120
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=1.4e-27 Score=235.68 Aligned_cols=320 Identities=13% Similarity=0.037 Sum_probs=215.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc-CC-CCCC----CCCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-NKEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~Y----~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+.++|||+.|.|+ +++ .+|.+.+++.+.+.. +. ...| +......++++++++++.. ++.|++
T Consensus 15 g~~~id~~~~~~~---g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-------~~~i~~- 82 (360)
T TIGR00858 15 GRRLLNFSSNDYL---GLA-SHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-------EAALLF- 82 (360)
T ss_pred CceEEecccCCcc---cCC-CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-------CCEEEE-
Confidence 4678999999652 333 278899999888754 11 0112 1123356788999998642 466776
Q ss_pred ecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC-CCcEEEE
Q 012628 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILL 234 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~ii 234 (459)
++| ++++..+ +...+.+||+|+++.|+|..+...++..|++++.++. +|++.+++.++... +++++++
T Consensus 83 -~~G-~~~~~~~--l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~ 151 (360)
T TIGR00858 83 -SSG-YLANVGV--ISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIV 151 (360)
T ss_pred -Cch-HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEE
Confidence 665 5555544 3334679999999999999999999999999887763 58899999887632 3578888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH--hcCCeEEEEEcCCcCcccCCCC
Q 012628 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA--TRGMELLVAQSYSKNLGLYAER 312 (459)
Q Consensus 235 ~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~~~G~R 312 (459)
+++++||||.. .++++|.++|+++|+++|+||+|..+.++. +..+..... ...+++++++||||.|+++|
T Consensus 152 ~~~~~~~~G~~---~~~~~i~~l~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g-- 223 (360)
T TIGR00858 152 TDGVFSMDGDI---APLPQLVALAERYGAWLMVDDAHGTGVLGE---DGRGTLEHFGLKPEPVDIQVGTLSKALGSYG-- 223 (360)
T ss_pred EeCCccCCCCC---cCHHHHHHHHHHcCcEEEEECcccccCcCC---CCCchHHhcCCCccCCcEEEEechhhhhccC--
Confidence 89999999998 668889999999999999999987654431 111111111 22357899999999999876
Q ss_pred cceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 313 IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 313 iG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
||+++ +++..+.+....... ....+.+...+.++...++. .+..++.+++++++++++.+.|+ +++
T Consensus 224 -G~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~al~~-------~~~~~~~~~~~~~~~~~l~~~L~-~~~ 289 (360)
T TIGR00858 224 -AYVAG---SQALIDYLINRARTL--IFSTALPPAVAAAALAALEL-------IQEEPWRREKLLALIARLRAGLE-ALG 289 (360)
T ss_pred -cEEEc---CHHHHHHHHHhCccc--eecCCCCHHHHHHHHHHHHH-------HhhCHHHHHHHHHHHHHHHHHHH-HcC
Confidence 99865 777444433221110 11112333333333333321 11235678899999999999999 876
Q ss_pred CCCCcccccCCcceeeecCCC-----HHHHHHHHhcccEEEcCC-------C----cEEEccC-ChhhHHHHHHHHH
Q 012628 393 SGKDWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAGL-SLAKCEYLADAII 452 (459)
Q Consensus 393 ~~~~~~~~~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g-------g----Ris~~~~-~~e~i~~~~~~l~ 452 (459)
+.+..+ ++.|+|+.+. .++.++|++ +||.+.++ | ||+++.. +++++++++++|+
T Consensus 290 ----~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 290 ----FTLMPS-CTPIVPVIIGDNASALALAEELQQ-QGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred ----CccCCC-CCCEEEEEeCCHHHHHHHHHHHHH-CCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 455544 4556666442 245566655 69999641 2 9998854 8899999998873
No 121
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.96 E-value=2.1e-27 Score=237.72 Aligned_cols=330 Identities=12% Similarity=0.071 Sum_probs=224.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCC---CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY---LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y---~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+.++|||+.|.|. +++. ++.+.+++.+.+.... ..| ....|..++++++++++...++. +++|++ |+
T Consensus 41 g~~~i~l~~~~~~---~~~~-~~~i~~a~~~~~~~~~-~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~--ts 110 (397)
T PRK06939 41 GKEVINFCANNYL---GLAN-HPELIAAAKAALDSHG-FGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILY--SS 110 (397)
T ss_pred CCeEEEeeccCcc---ccCC-CHHHHHHHHHHHHHcC-CCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEE--cC
Confidence 5679999999752 4443 7889998888875421 233 23468888888887777665553 366777 66
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc---CCCCcEEEEe
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLH 235 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~ii~ 235 (459)
| ++++..+ +...+.+||+|++++|+|+.+...++.+|++++.++. .|++.+++.+++ ...+++++++
T Consensus 111 G-~~a~~~~--~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~ 180 (397)
T PRK06939 111 C-FDANGGL--FETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIAT 180 (397)
T ss_pred h-HHHHHHH--HHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEE
Confidence 6 7777777 3445789999999999999999999999998877754 478888888864 1226777887
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh-cCCeEEEEEcCCcCcccCCCCcc
Q 012628 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIG 314 (459)
Q Consensus 236 ~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RiG 314 (459)
.+.+||||.. +++++|.++|++||+++|+||+|.....+ .... ... .... ..+.+++++||||.++ |+|+|
T Consensus 181 ~~v~~~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~-~~~~-~~~-~~~~~~~~~~i~~~S~sK~~~--g~r~G 252 (397)
T PRK06939 181 DGVFSMDGDI---APLPEICDLADKYDALVMVDDSHAVGFVG-ENGR-GTV-EHFGVMDRVDIITGTLGKALG--GASGG 252 (397)
T ss_pred ecCcCCCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcC-CCCC-CHH-HHcCCCCCCcEEEEECHHHhC--ccCce
Confidence 7789999997 78999999999999999999998522111 1011 111 1112 1235799999999995 56999
Q ss_pred eEEEEeCChhHHHHHHHHHHhhccccccCC-chHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 012628 315 AMNVVCSSSDLAARVKSQLKRLARPMYSNP-PVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 393 (459)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 393 (459)
|+++ +++.++.+..... ...+.++ +...+.++...++. . +..++.+++++++++++.+.|+ +++
T Consensus 253 ~v~~---~~~~~~~l~~~~~---~~~~~~~~~~~~~~a~~~al~~---~----~~~~~~~~~~~~~~~~l~~~L~-~~~- 317 (397)
T PRK06939 253 YTAG---RKEVIDWLRQRSR---PYLFSNSLAPAIVAASIKVLEL---L----EESDELRDRLWENARYFREGMT-AAG- 317 (397)
T ss_pred EEEe---CHHHHHHHHHhCc---cccccCCCCHHHHHHHHHHHHH---H----hcCHHHHHHHHHHHHHHHHHHH-HcC-
Confidence 9866 7775555433211 1112222 22222333222211 0 1124677889999999999999 876
Q ss_pred CCCcccccCCcceeeec-C--C-CHHHHHHHHhcccEEEcCC-------C----cEEEcc-CChhhHHHHHHHHHHHHhh
Q 012628 394 GKDWSFILRQIGMFSFT-G--L-NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 394 ~~~~~~~~~~~g~f~~~-~--l-~~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~e~i~~~~~~l~~~~~~ 457 (459)
++...+.++++.+. + . +.++++.|+++ ||.+.++ + ||+++. .+++++++++++|++++++
T Consensus 318 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 318 ---FTLGPGEHPIIPVMLGDAKLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred ---CCcCCCCCCEEEEEECCHHHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 45555666666432 2 1 23557777776 9988642 1 888865 4899999999999999876
Q ss_pred c
Q 012628 458 V 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 394 ~ 394 (397)
T PRK06939 394 L 394 (397)
T ss_pred h
Confidence 4
No 122
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=5.1e-28 Score=240.63 Aligned_cols=323 Identities=13% Similarity=0.049 Sum_probs=217.9
Q ss_pred cCCCCCCccCcHHHHHHHHHHhhcCCCCCCC--------CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHH
Q 012628 93 YRTEELQPYVLDVVKKAENLMLERGENKEYL--------PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (459)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~--------~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~ 164 (459)
|+|..+..++++.+.+++.+.+.... .++. ...-++++|+.++++++.. +++|++ ++|+++++
T Consensus 3 yld~a~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~i~~--~~g~t~a~ 73 (381)
T PRK02948 3 YLDYAATTPMSKEALQTYQKAASQYF-GNESSLHDIGGTASSLLQVCRKTFAEMIGGE------EQGIYF--TSGGTESN 73 (381)
T ss_pred eccCCCCCCCCHHHHHHHHHHHHhcC-CCCccccHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCcHHHHH
Confidence 56666666678999999988775311 1111 0123567888899887543 688999 99999999
Q ss_pred HHHHHHHHH--hCCCCEEEEcCCCCcch---HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 165 RLAAALIER--YFPGAKVLISSPTWGNH---KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 165 ~l~~~~~~~--~~~gd~Vlv~~p~y~~~---~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
.++...+.. ..+||+|+++.+.|+.+ ...++..|++++.+|++ +++.+|++.+++.+++ +++++++++|+
T Consensus 74 ~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~---~~~lv~~~~~~ 148 (381)
T PRK02948 74 YLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVD--KSGLIRLVDLERAITP---DTVLASIQHAN 148 (381)
T ss_pred HHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC--CCCCCCHHHHHHhcCC---CCEEEEEECCc
Confidence 987433321 14789999998666544 44566789999999984 4567999999999875 67889999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (459)
||||.+ .++++|.++|+++|+++++|++ +.++..+.+ +...+.++++.|+||.+|++| +|++++
T Consensus 149 n~tG~~---~~~~~I~~l~~~~~~~vivD~~-~~~g~~~~~---------~~~~~~d~~~~s~~K~~gp~G--~G~l~~- 212 (381)
T PRK02948 149 SEIGTI---QPIAEIGALLKKYNVLFHSDCV-QTFGKLPID---------VFEMGIDSLSVSAHKIYGPKG--VGAVYI- 212 (381)
T ss_pred CCcEee---hhHHHHHHHHHHcCCEEEEECh-hhccccccC---------cccCCCCEEEecHHhcCCCCc--EEEEEE-
Confidence 999999 5577899999999999999965 666532211 123356788999999999989 799865
Q ss_pred eCChhH-HHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 012628 320 CSSSDL-AARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 398 (459)
Q Consensus 320 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 398 (459)
+++. +..+.............+++..++.++...|... .+.+++.+++++++++++.+.|+ ++|+ +
T Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~------~~~~~~~~~~~~~~~~~l~~~L~-~~~~----~ 279 (381)
T PRK02948 213 --NPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI------LKNMQEESLRFKELRSYFLEQIQ-TLPL----P 279 (381)
T ss_pred --cCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHh-cCCC----C
Confidence 4441 1111000000000112245555655555555321 23367888999999999999999 8863 3
Q ss_pred cccCC-cc-----e--eeecCCCHHHHHHHHhcccEEEcC-------------------------CC--cEEEccC-Chh
Q 012628 399 FILRQ-IG-----M--FSFTGLNKAQSDNMTNKWHVYMTK-------------------------DG--RISLAGL-SLA 442 (459)
Q Consensus 399 ~~~~~-~g-----~--f~~~~l~~~~~~~ll~~~gI~v~~-------------------------gg--Ris~~~~-~~e 442 (459)
+.... .. + |...+++.+.+...++++||.++. .+ |||++.. +++
T Consensus 280 v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~ 359 (381)
T PRK02948 280 IEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKD 359 (381)
T ss_pred EEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHH
Confidence 33221 11 1 111244544433344567999973 12 9998865 889
Q ss_pred hHHHHHHHHHHHHhhc
Q 012628 443 KCEYLADAIIDSYHNV 458 (459)
Q Consensus 443 ~i~~~~~~l~~~~~~~ 458 (459)
|++.++++|+++++++
T Consensus 360 di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 360 QIDTTIHALETIGNQF 375 (381)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988753
No 123
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=3.5e-27 Score=236.40 Aligned_cols=326 Identities=14% Similarity=0.083 Sum_probs=220.5
Q ss_pred ccCCCCCCccCcHHHHHHHHHHhhcCCCC----CCC----CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 92 AYRTEELQPYVLDVVKKAENLMLERGENK----EYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 92 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~Y~----~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
.|+|..+..++++.|.+++.+.+...... .|. ...-.+++|+++++++... ++++|++ |+|+|++
T Consensus 25 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~--t~g~t~~ 97 (406)
T PRK09295 25 AYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINAR-----SAEELVF--VRGTTEG 97 (406)
T ss_pred EEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcC-----CCCeEEE--eCCHHHH
Confidence 44555555566899999998887532111 110 0123568999999997642 2678999 9999999
Q ss_pred HHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCC
Q 012628 164 LRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (459)
Q Consensus 164 ~~l~~~~~~--~~~~gd~Vlv~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~ 237 (459)
+++++..+. .+.+||+|+++++.|++ |...++..|++++.+|.+ .++.+|++++++++++ +++++++++
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~---~t~lv~l~~ 172 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLN--PDGTLQLETLPALFDE---RTRLLAITH 172 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCCCHHHHHHhcCC---CcEEEEEec
Confidence 998854331 35689999999987753 455667789999999984 4567999999999875 788999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEE
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (459)
|+||||.++ ++++|+++|+++|+++++|++|.. +..+.+ +...+.++++.|++|.+|++| +||++
T Consensus 173 ~~n~tG~~~---~~~~i~~~~~~~~~~vivD~a~~~-g~~~~~---------~~~~~~D~~~~s~~K~~gp~G--~G~l~ 237 (406)
T PRK09295 173 VSNVLGTEN---PLAEMIALAHQHGAKVLVDGAQAV-MHHPVD---------VQALDCDFYVFSGHKLYGPTG--IGILY 237 (406)
T ss_pred chhcccccC---CHHHHHHHHHHcCCEEEEEccccc-CccccC---------chhcCCCEEEeehhhccCCCC--cEEEE
Confidence 999999995 467899999999999999999643 322111 122345688899999999877 79997
Q ss_pred EEeCChhHHHHHHHHHHhh------------------ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012628 318 VVCSSSDLAARVKSQLKRL------------------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 379 (459)
Q Consensus 318 ~v~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 379 (459)
+ +++..+.+....... .+...++++..+..++...++ +.. +..+++++++.+++
T Consensus 238 ~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~---~~~--~~g~~~i~~~~~~l 309 (406)
T PRK09295 238 V---KEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALD---YVS--ALGLNNIAEYEQNL 309 (406)
T ss_pred E---chHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHH---HHH--HhCHHHHHHHHHHH
Confidence 6 666443321100000 001111333333333333321 110 12356778888999
Q ss_pred HHHHHHHHhhccCCCCCcccccC--Ccceeeec--CCCHHHHHHHHhcccEEEcCC--------------C--cEEEccC
Q 012628 380 RQKLFDSLSAKDKSGKDWSFILR--QIGMFSFT--GLNKAQSDNMTNKWHVYMTKD--------------G--RISLAGL 439 (459)
Q Consensus 380 ~~~l~~~L~~~~g~~~~~~~~~~--~~g~f~~~--~l~~~~~~~ll~~~gI~v~~g--------------g--Ris~~~~ 439 (459)
++++.+.|. +++ ++++..+ ..+++.|. +.+.+.+...++++||.++.| | |+|++.+
T Consensus 310 ~~~l~~~l~-~~~---~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~y 385 (406)
T PRK09295 310 MHYALSQLE-SVP---DLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY 385 (406)
T ss_pred HHHHHHHHh-cCC---CEEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCC
Confidence 999999998 763 1444443 24555442 445555555667789999754 2 9998876
Q ss_pred -ChhhHHHHHHHHHHHHh
Q 012628 440 -SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 440 -~~e~i~~~~~~l~~~~~ 456 (459)
+++|++.++++|+++..
T Consensus 386 nt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 386 NTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 78999999999988754
No 124
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=3.9e-28 Score=212.64 Aligned_cols=277 Identities=19% Similarity=0.206 Sum_probs=213.0
Q ss_pred CccccCceEEeecccchhHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHH
Q 012628 145 SVLKEQRVATVQGLSGTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (459)
Q Consensus 145 ~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i 223 (459)
.++++++|++ ..|+-+.+.++.++ .+.|| ++|++.-|+|..|.-.+...+++|+.+|.+ .+|.+|.|++.+.+
T Consensus 82 kpLt~dnic~--GvGsDE~ID~iiR~--~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~--pdF~lnvdai~evl 155 (375)
T KOG0633|consen 82 KPLTSDNICV--GVGSDELIDLIIRC--VCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLN--PDFSLNVDAIAEVL 155 (375)
T ss_pred CCCCccceEE--ecCcHHHHHHHHhh--eecCCccceeecCCcceeEEEEeecCCceEEEecCC--CCccccHHHHHHHH
Confidence 3466899999 99999999998433 36699 899999999999988888899999999994 47999999999988
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCC
Q 012628 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (459)
Q Consensus 224 ~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (459)
+.. ...+++++++|+||||..++.+++++|.+-= -+.++++||+|.+|.... +-..++.+.++++++.+||
T Consensus 156 ~~d-s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p--~nglVVvDEAYidFsg~~------S~~~lV~kYpNLivlqTlS 226 (375)
T KOG0633|consen 156 ELD-SKIKCIFLTSPGNPTGSIIKEDDILKILEMP--DNGLVVVDEAYIDFSGVE------SRMKLVKKYPNLIVLQTLS 226 (375)
T ss_pred hcc-ccceEEEEcCCCCCCcccccHHHHHHHHhCC--CCcEEEEeeeeEeecccc------ccchHhHhCCceeehhhhh
Confidence 762 3577888999999999999999999888632 279999999999997421 2234578889999999999
Q ss_pred cCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012628 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 383 (459)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (459)
|.||++|+|+||... +.+ +...+.+.+.. + +.+..+..++..+|++... ..++..++.+-+.|.+|
T Consensus 227 KsfGLAGiRvG~~~~---~~~----ia~iln~~KaP-Y-NiS~~~s~~AL~Als~~n~-----kkme~~rdaiv~er~RL 292 (375)
T KOG0633|consen 227 KSFGLAGIRVGYGAF---PLS----IAEILNRAKAP-Y-NISVAGSVAALAALSDSNG-----KKMEDVRDAIVRERERL 292 (375)
T ss_pred hhcCcceeEeecccc---cHH----HHHHHHhccCC-c-cccchhHHHHHHhcCcccc-----hHHHHHHHHHHHHHHHH
Confidence 999999999999876 777 55555554444 3 5666677788888885432 34788889999999999
Q ss_pred HHHHhhccCCCCCcccccCCcceeeecCC-------CHHHHHHHHhcccEEEcCCC---------cEEEccCChhhHHHH
Q 012628 384 FDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG---------RISLAGLSLAKCEYL 447 (459)
Q Consensus 384 ~~~L~~~~g~~~~~~~~~~~~g~f~~~~l-------~~~~~~~ll~~~gI~v~~gg---------Ris~~~~~~e~i~~~ 447 (459)
...|. +.++-. ++..+....|+.+.+ +.....+++.++||.++--| ||+.+ ++|+...+
T Consensus 293 ~keLt-~v~~~~--~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG--t~EentvL 367 (375)
T KOG0633|consen 293 FKELT-EVPFLN--DYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG--TPEENTVL 367 (375)
T ss_pred HHHhh-cCcccc--CCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC--CcccchHH
Confidence 99998 764312 223333345655532 33445566667899987542 99988 66788899
Q ss_pred HHHHHHHH
Q 012628 448 ADAIIDSY 455 (459)
Q Consensus 448 ~~~l~~~~ 455 (459)
++.|++++
T Consensus 368 ~k~~K~~l 375 (375)
T KOG0633|consen 368 MKCLKQFL 375 (375)
T ss_pred HHHHHhhC
Confidence 99888753
No 125
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.96 E-value=9.3e-27 Score=232.00 Aligned_cols=331 Identities=14% Similarity=0.115 Sum_probs=224.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc-C-CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+++++||+.|.+. ++++ +|.+.+++.+.+.. . ....|.+..|..++++++++++....+. ++.+++ ++|
T Consensus 32 g~~~id~~~~~~~---g~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~--~sG 102 (385)
T TIGR01825 32 GKEVINLSSNNYL---GFAD-HPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVF--QSG 102 (385)
T ss_pred CceEEEeeccCcc---CCCC-CHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEE--CcH
Confidence 4688999998642 4543 78888888887753 2 1245777889999999999998766553 455666 655
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC-CCcEEEEeCCC
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCA 238 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~ii~~~p 238 (459)
++++..+ +...+.+||.|+++.|+|..+...+...|+++..++ .+|++++++.+++.. +++++++++++
T Consensus 103 -~~a~~~a--~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v 172 (385)
T TIGR01825 103 -FNTNQGV--LSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGV 172 (385)
T ss_pred -HHHHHHH--HHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecC
Confidence 6666665 344477999999999999999888888888776553 378888988887532 36788888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
+||||.+ .++++|.++|++||+++|+||+|..+.++.... .....+--..+.++++.||||.++++| ||+++
T Consensus 173 ~~~tG~~---~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~ 244 (385)
T TIGR01825 173 FSMDGDV---APLPEIVELAERYGAVTYVDDAHGSGVMGEAGR--GTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAG 244 (385)
T ss_pred CcCCCCc---cCHHHHHHHHHHhCCEEEEECcccccCcCCCCC--ccHhhcCCCcCCcEEEEeccHHhhcCC---CEEec
Confidence 9999998 457889999999999999999997665431101 111111112457899999999998766 99855
Q ss_pred EeCChhHHHHHHHHHHhhcccccc-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 012628 319 VCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDW 397 (459)
Q Consensus 319 v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 397 (459)
+++.++.+...... .... ..+...+.++...++.. .. ..+..++++++++++.+.|+ ++| +
T Consensus 245 ---~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~al~~~---~~----~~~~~~~~~~~~~~l~~~L~-~~g----~ 306 (385)
T TIGR01825 245 ---HKELIEYLKNRARP---FLFSTAQPPAVVAALAAAVDEL---QR----SPELMERLWDNTRFFKAGLG-KLG----Y 306 (385)
T ss_pred ---CHHHHHHHHHhCcc---ccccCCCCHHHHHHHHHHHHHH---hc----CHHHHHHHHHHHHHHHHHHH-HcC----C
Confidence 77755544322111 1112 22334444444433211 00 12355667778999999999 887 5
Q ss_pred ccccCCcceeeec-CC---CHHHHHHHHhcccEEEcCC-------C----cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 398 SFILRQIGMFSFT-GL---NKAQSDNMTNKWHVYMTKD-------G----RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 398 ~~~~~~~g~f~~~-~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
++..+++.++.+. +. +.++.+.|+++ ||.+.+. | |++++ ..+++++++++++|+++++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 307 DTGGSETPITPVVIGDEKAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 6666666544332 21 23556777776 9988531 2 67654 238999999999999998764
No 126
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=3.4e-27 Score=239.30 Aligned_cols=329 Identities=12% Similarity=0.060 Sum_probs=226.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc-CC-----CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+.+.+||+.|.|.+ ... +|.+.+++.+.+++ +. ...|++..+..+|++++++++.. ++.|++
T Consensus 108 G~~~id~~s~~~lg---l~~-~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-------~~~i~~- 175 (481)
T PLN02822 108 GKDVVNFASANYLG---LIG-NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-------PDSILY- 175 (481)
T ss_pred CceEEEeECCCcCC---CCC-CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-------CCEEEE-
Confidence 45789999997743 332 78899998888865 21 12477788899999999999753 567888
Q ss_pred ecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC---CCCc-E
Q 012628 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGS-F 231 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~-~ 231 (459)
++|++ ++..+ +.+...+||.|++....+..+...+...|.+++.++.++.+ +++...+.+... .+++ +
T Consensus 176 -s~G~~-a~~sa--i~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~----~l~~~l~~~~~~~~~~~~~~~ 247 (481)
T PLN02822 176 -SYGLS-TIFSV--IPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDME----SLRNTLEKLTAENKRKKKLRR 247 (481)
T ss_pred -CCHHH-HHHHH--HHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHH----HHHHHHHHHhhhhcccCCCcE
Confidence 77766 45554 33446799999988877777777788889999998874222 223322222221 1233 6
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh--cCCeEEEEEcCCcCcccC
Q 012628 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT--RGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 232 ~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~~ 309 (459)
++++..++|+||.+.+ +++|+++|++||+++|+||+|....++.... .+....+ ....++++.||||.||++
T Consensus 248 ~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~---G~~e~~~v~~~~~dii~~s~sKalg~~ 321 (481)
T PLN02822 248 YIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGR---GLSEHFGVPIEKIDIITAAMGHALATE 321 (481)
T ss_pred EEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCC---ChHHHcCCCCCCCeEEEecchhhhhhC
Confidence 8888999999999966 7889999999999999999988544442111 1112211 124578999999999999
Q ss_pred CCCcceEEEEeCChhHHHHHHHHHHhhcc-cccc-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 310 AERIGAMNVVCSSSDLAARVKSQLKRLAR-PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 387 (459)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 387 (459)
| ||+++ +++.++. +..... ..++ +.|...+.++...|+.. +...+.+++++++++++.+.|
T Consensus 322 G---G~i~g---~~~ii~~----~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l-------~~~~~~~~~l~~~~~~l~~~L 384 (481)
T PLN02822 322 G---GFCTG---SARVVDH----QRLSSSGYVFSASLPPYLASAAITAIDVL-------EDNPSVLAKLKENIALLHKGL 384 (481)
T ss_pred C---eEEEc---CHHHHHH----HHhcCCceeeccccCHHHHHHHHHHHHHH-------HhCHHHHHHHHHHHHHHHHHH
Confidence 8 99865 8874443 332222 2232 33455555655555321 112467789999999999999
Q ss_pred hhcc-CCCCCcccccCCcceeeecCCC-------------HHHHHHHHhcccEEEcCC------------C-cEEEcc-C
Q 012628 388 SAKD-KSGKDWSFILRQIGMFSFTGLN-------------KAQSDNMTNKWHVYMTKD------------G-RISLAG-L 439 (459)
Q Consensus 388 ~~~~-g~~~~~~~~~~~~g~f~~~~l~-------------~~~~~~ll~~~gI~v~~g------------g-Ris~~~-~ 439 (459)
+ +. | +.+..+.+++++++.+. .+++++|++++||.+.++ + ||+++. .
T Consensus 385 ~-~~~g----~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~ 459 (481)
T PLN02822 385 S-DIPG----LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGH 459 (481)
T ss_pred H-hcCC----cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCC
Confidence 9 75 4 56666667777665431 245778886779999864 1 887663 2
Q ss_pred ChhhHHHHHHHHHHHHhhc
Q 012628 440 SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 440 ~~e~i~~~~~~l~~~~~~~ 458 (459)
++++|++++++|+++++++
T Consensus 460 t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 460 TESDILKASESLKRVAASV 478 (481)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988763
No 127
>PLN02721 threonine aldolase
Probab=99.96 E-value=1.2e-26 Score=228.58 Aligned_cols=324 Identities=15% Similarity=0.112 Sum_probs=205.9
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
.+++|+.+.+ ..| ++.+.+++.+.........|. ....+|++++++++... .+++ +.+|+++
T Consensus 6 ~~~~~~~~~~----~~~--~~~~~~a~~~~~~~~~~~~~~--~~~~~l~~~la~~~~~~--------~~~~--~~~Gs~a 67 (353)
T PLN02721 6 RVVDLRSDTV----TKP--TDAMRAAMANAEVDDDVLGYD--PTALRLEEEMAKIFGKE--------AALF--VPSGTMG 67 (353)
T ss_pred hhhhhhcccc----cCC--CHHHHHHHHhccCCCcccCCC--HHHHHHHHHHHHHhCCc--------eeEE--ecCccHH
Confidence 4678998887 332 788888887641112223343 33789999999997542 2455 6677777
Q ss_pred HHHHHHHHHHhC-CCCEEEEcCCCCcchHH---HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC----CCCcEEEEe
Q 012628 164 LRLAAALIERYF-PGAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSFILLH 235 (459)
Q Consensus 164 ~~l~~~~~~~~~-~gd~Vlv~~p~y~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~----~~~~~~ii~ 235 (459)
+.++ +...+. +||+|++++|+|..... .+...|++++.+|.+ +++.+|++.+++.+++. .++++++++
T Consensus 68 ~~~~--l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l 143 (353)
T PLN02721 68 NLIS--VLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICL 143 (353)
T ss_pred HHHH--HHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEE
Confidence 6655 333456 99999999999854333 567789999999873 45679999999999731 025677776
Q ss_pred CC-CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcc
Q 012628 236 GC-AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (459)
Q Consensus 236 ~~-p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 314 (459)
++ +|||||.+++.+++++|.++|++||+++|+|++|.......... ....+.... ..++.|+||.++. ++|
T Consensus 144 ~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~---~~~~~~~~~--d~~~~s~sK~l~~---~~G 215 (353)
T PLN02721 144 ENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV---PVHRLVKAA--DSVSVCLSKGLGA---PVG 215 (353)
T ss_pred eccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC---CHHHHhhhC--CEEEEecccccCC---cee
Confidence 55 68999999999999999999999999999999975221100001 111222222 3445589999874 367
Q ss_pred eEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 012628 315 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSG 394 (459)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 394 (459)
|+ +..+++.++.+..... ....++...++.++..+. .+ ++.+++++ +..++++.+.+.|+ +++.
T Consensus 216 ~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~l----~~~~~~~~-~~~~~~~~l~~~L~-~~~~- 279 (353)
T PLN02721 216 SV--IVGSKSFIRKAKRLRK----TLGGGMRQVGVLAAAALV---AL----QENVPKLE-DDHKKAKLLAEGLN-QIKG- 279 (353)
T ss_pred eE--EecCHHHHHhHHHHHH----hcCCCeehhHHHHHHHHH---HH----HHHHHHHH-HHHHHHHHHHHHHH-hCCC-
Confidence 64 2347775544332211 111122222222221111 11 12233333 33556788999998 7631
Q ss_pred CCcc--cccCCcceeeecCC------CH-HHHHHHHhcccEEEcCCC----cEEEc-cCChhhHHHHHHHHHHHHhh
Q 012628 395 KDWS--FILRQIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 395 ~~~~--~~~~~~g~f~~~~l------~~-~~~~~ll~~~gI~v~~gg----Ris~~-~~~~e~i~~~~~~l~~~~~~ 457 (459)
+. +..+.++ |+|+.+ +. ++.++|. ++||.+.+++ |++++ ..+++++++++++|++++..
T Consensus 280 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 280 --LRVNVAAVETN-IVYFDITDGSRITAEKLCKSLE-EHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred --cEEecCCccce-EEEEEccCCccccHHHHHHHHH-hCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 32 2344444 566533 23 3455665 5799999986 99986 44899999999999998764
No 128
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=9.4e-27 Score=236.50 Aligned_cols=335 Identities=12% Similarity=0.023 Sum_probs=218.2
Q ss_pred CCCceeecccccCCCCCC-ccCcHHHHHHHHHHhhc--CCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQ-PYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~-~~~~~~v~~a~~~~~~~--~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
...++||+.-.|+.-... +.+.+.+.+++.+.-.. .....|++..+..++++++|+++.. ++.|++ ++
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~-------~~ai~~--~~ 169 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK-------PAAIVF--GM 169 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC-------CcEEEE--CC
Confidence 346899999888654322 22356777777665321 1224487888999999999999753 566777 55
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC----CCC-----
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGG----- 229 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~----~~~----- 229 (459)
| ..++..+ +...+.+||.|++++|+|..+...++..|++++.++.. |.+.+++.+++. .++
T Consensus 170 G-~~an~~~--i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~ 239 (489)
T PLN02483 170 G-YATNSTI--IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW 239 (489)
T ss_pred H-HHHHHHH--HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCC
Confidence 4 4444444 34457899999999999999999999999999999863 445555555421 111
Q ss_pred -cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh--cCCeEEEEEcCCcCc
Q 012628 230 -SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT--RGMELLVAQSYSKNL 306 (459)
Q Consensus 230 -~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~ 306 (459)
..++++....|++|.+ .++++|+++|++||+++|+||+|.....+. .......+.. ..+.+++++||||.|
T Consensus 240 ~k~livve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~---~G~g~~~~~~v~~~~~dI~~~SfSKs~ 313 (489)
T PLN02483 240 KKIIVIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGK---TGRGVCELLGVDPADVDIMMGTFTKSF 313 (489)
T ss_pred ceEEEEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCC---CCCchHHhcCCCcccCcEEEEecchhc
Confidence 2355566677999999 788899999999999999999986332221 1111112222 235689999999999
Q ss_pred ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHH--HHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA--NVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 384 (459)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (459)
|++| ||+++ +++.++.+...... .......++...|.+++ ..+.+.+- .+...+.+++++++++++.
T Consensus 314 g~~G---G~i~~---~~~li~~l~~~~~~-~~~~~~~~p~~~~~~~aaL~~l~~~~g----~~~~~~~~~~l~~~~~~l~ 382 (489)
T PLN02483 314 GSCG---GYIAG---SKELIQYLKRTCPA-HLYATSMSPPAVQQVISAIKVILGEDG----TNRGAQKLAQIRENSNFFR 382 (489)
T ss_pred ccCc---eEEEc---CHHHHHHHHHhCcc-ccccCCcCHHHHHHHHHHHHHHHhCcc----ccchHHHHHHHHHHHHHHH
Confidence 9887 99865 88855444332110 00111123333333322 22221110 0113455788999999999
Q ss_pred HHHhhccCCCCCcccccCCcceeeec--CC---CHHHHHHHHhcccEEEcCC---------C--cEEEcc-CChhhHHHH
Q 012628 385 DSLSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYL 447 (459)
Q Consensus 385 ~~L~~~~g~~~~~~~~~~~~g~f~~~--~l---~~~~~~~ll~~~gI~v~~g---------g--Ris~~~-~~~e~i~~~ 447 (459)
+.|+ ++| +.+..+.++..+|+ .. ..++.+.|++ +||.+++. + ||+++. .++|+++++
T Consensus 383 ~~L~-~~G----~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~ 456 (489)
T PLN02483 383 SELQ-KMG----FEVLGDNDSPVMPIMLYNPAKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSREDLIKA 456 (489)
T ss_pred HHHH-HCC----CcccCCCCCCEEEEEECCHHHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHH
Confidence 9999 887 45554444433332 21 2356777777 59998742 1 888875 389999999
Q ss_pred HHHHHHHHhhc
Q 012628 448 ADAIIDSYHNV 458 (459)
Q Consensus 448 ~~~l~~~~~~~ 458 (459)
+++|+++++.+
T Consensus 457 l~~L~~~~~~~ 467 (489)
T PLN02483 457 LEVISEVGDLV 467 (489)
T ss_pred HHHHHHHHHHh
Confidence 99999988754
No 129
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.96 E-value=1.2e-26 Score=230.73 Aligned_cols=332 Identities=13% Similarity=0.059 Sum_probs=215.7
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...|||..|.+.+..+. .+|.+.+++.+.+.... ...| +..-..+|.+.+++++ + .+++++ ++|
T Consensus 26 g~~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~~~~--~~s 92 (379)
T TIGR00707 26 GKEYLDFVAGIAVNSLGH--AHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS----G----ADRVFF--CNS 92 (379)
T ss_pred CCEEEEcCcchhhccCCC--CCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCC
Confidence 346899999865344443 36889999888775421 1234 3444566666677664 2 247888 999
Q ss_pred chhHHHHHHHHHHHhC-----CCCEEEEcCCCCcchHHHhhhCCCCeee----eeeecCCCCC--CCHHHHHHHHHcCCC
Q 012628 160 GTGSLRLAAALIERYF-----PGAKVLISSPTWGNHKNIFNDARVPWSE----YRYYDPKTVG--LDFEGMIADIKAAPG 228 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~-----~gd~Vlv~~p~y~~~~~~~~~~G~~v~~----v~~~~~~~~~--~d~e~l~~~i~~~~~ 228 (459)
|++++.++.+++..+. +||+|++++|+|..+.......+..... .++..+..+. .|++.+++.+++
T Consensus 93 g~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 169 (379)
T TIGR00707 93 GAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD--- 169 (379)
T ss_pred cHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh---
Confidence 9999999866554332 3799999999998887666655543321 2221111111 189999998875
Q ss_pred CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 229 GSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
++++++++.++||+|.. ++.+++++|.++|++||+++|+||+|.++++.+ ...... .....++++ +|||.++
T Consensus 170 ~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g---~~~~~~-~~~~~~d~~---t~sK~~~ 242 (379)
T TIGR00707 170 ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG---KFFAYE-HYGIEPDII---TLAKGLG 242 (379)
T ss_pred CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhhHH-hcCCCCCEE---EEccccc
Confidence 56777777677777764 789999999999999999999999998886532 111111 122233433 7899999
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 387 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 387 (459)
+|+|+||+++ +++ +++.+.........+.+.++|.++...|+.-. -....++++++++++.+.|
T Consensus 243 -~G~riG~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~--------~~~~~~~~~~~~~~~~~~l 306 (379)
T TIGR00707 243 -GGVPIGATLA---KEE----VAEAFTPGDHGSTFGGNPLACAAALAVLEVIE--------KERLLENVKEKGDYFKERL 306 (379)
T ss_pred -CCcccEEEEE---cHH----HHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHHHH
Confidence 9999999866 777 44444433222233566777777766553110 0234566667777777777
Q ss_pred hhccCCCCCcccccCCcceeeecCC--CH-HHHHHHHhcccEEEcCCC----cEEEcc-CChhhHHHHHHHHHHHH
Q 012628 388 SAKDKSGKDWSFILRQIGMFSFTGL--NK-AQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY 455 (459)
Q Consensus 388 ~~~~g~~~~~~~~~~~~g~f~~~~l--~~-~~~~~ll~~~gI~v~~gg----Ris~~~-~~~e~i~~~~~~l~~~~ 455 (459)
+ +++....+....+ .|.|+|+.+ +. ++.+.|.+ +||.+.|++ ||+++. .+++++++++++|++++
T Consensus 307 ~-~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 307 E-ELGKNYPNKEVRG-KGLMLGIELEAPCKDIVKKALE-KGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred H-HHHhhCCCCcccc-CceEEEEEecCcHHHHHHHHHH-CCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 6 5432111222223 466666644 23 44555554 699999875 888653 48999999999998764
No 130
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=1.4e-26 Score=232.21 Aligned_cols=330 Identities=13% Similarity=0.076 Sum_probs=221.8
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC--C--CCC----CCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--K--EYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~--~Y~----~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+++-|..|. ..++|+.+.+++.+.+..... . .+. ....++++|+.++++++... +++|++
T Consensus 18 ~~~yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~-----~~~v~~- 85 (403)
T TIGR01979 18 PLVYLDSAA------TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAAS-----DEEIVF- 85 (403)
T ss_pred ceEEEeCcc------ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCC-----CCeEEE-
Confidence 456666554 334588899999887643210 1 011 12356799999999975531 578999
Q ss_pred ecccchhHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCC
Q 012628 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~--~~~~gd~Vlv~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 229 (459)
|.|+++++++++..+. .+.+||+|+++++.|+. +....+..|++++.+|.+ +++.+|++.+++++++ +
T Consensus 86 -~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~---~ 159 (403)
T TIGR01979 86 -TRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTE---K 159 (403)
T ss_pred -eCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhcc---C
Confidence 9999999998744332 24689999999998764 345566789999999984 4577999999999976 7
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (459)
++++++++++||||.+++ +++|.++|+++|+++++|++|.... .+. . +...+.++++.|++|.+|++
T Consensus 160 ~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~-~~~-----~----~~~~~~d~~~~s~~K~~gp~ 226 (403)
T TIGR01979 160 TKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH-MPV-----D----VQALDCDFYVFSGHKMYGPT 226 (403)
T ss_pred CeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc-ccc-----C----ccccCCCEEEEecccccCCC
Confidence 888999999999999955 7789999999999999999965332 111 1 12224578999999999977
Q ss_pred CCCcceEEEEeCChhHHHHHHHHHHhh-----------------ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q 012628 310 AERIGAMNVVCSSSDLAARVKSQLKRL-----------------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 372 (459)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 372 (459)
| +|++++ +++..+.+....... .+...+.++.....++...++ +.. ...++++
T Consensus 227 G--~g~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~---~~~--~~g~~~~ 296 (403)
T TIGR01979 227 G--IGVLYG---KEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAID---YLE--AIGLENI 296 (403)
T ss_pred C--ceEEEE---chHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHH---HHH--HhCHHHH
Confidence 7 899876 666433321000000 000011233333333333221 110 1124677
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccccCC-----cceeeec--CCCHHHHHHHHhcccEEEcCC--------------
Q 012628 373 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-----IGMFSFT--GLNKAQSDNMTNKWHVYMTKD-------------- 431 (459)
Q Consensus 373 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~-----~g~f~~~--~l~~~~~~~ll~~~gI~v~~g-------------- 431 (459)
+++..++++++.+.|+ +++ ++++..+. ++++.|. +.+...+...++++||.+.+|
T Consensus 297 ~~~~~~l~~~l~~~l~-~~~---g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~ 372 (403)
T TIGR01979 297 EAHEHELTAYALERLG-EIP---GLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVP 372 (403)
T ss_pred HHHHHHHHHHHHHHHh-cCC---CEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCC
Confidence 8888999999999998 763 15555443 5555442 445555555666789998753
Q ss_pred C--cEEEccC-ChhhHHHHHHHHHHHHhhc
Q 012628 432 G--RISLAGL-SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 432 g--Ris~~~~-~~e~i~~~~~~l~~~~~~~ 458 (459)
| |||++.. +++|+++++++|+++++.+
T Consensus 373 ~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 373 ATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 2 9998865 7899999999999988765
No 131
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=1.7e-26 Score=225.97 Aligned_cols=308 Identities=16% Similarity=0.031 Sum_probs=210.8
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEE
Q 012628 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv 182 (459)
++.+.+++.+..... ..|.+.....++++.++++++ ++++++ +.||++++.++. ...+.+||+|++
T Consensus 11 ~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~g--------~~~~~~--~~~gt~a~~~~~--~~l~~~gd~v~~ 76 (338)
T cd06502 11 TPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELFG--------KEAALF--VPSGTAANQLAL--AAHTQPGGSVIC 76 (338)
T ss_pred CHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHhC--------CCeEEE--ecCchHHHHHHH--HHhcCCCCeEEE
Confidence 789999998865322 367777888999999999864 245667 788999988873 334679999999
Q ss_pred cCCCCcchHH---HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC----CCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012628 183 SSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (459)
Q Consensus 183 ~~p~y~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~----~~~~~ii~~~p~NPTG~~~s~~~l~~i~ 255 (459)
+.|+|..+.. ..+..|++++.+|.+ . +.+|++++++++++.. ++++++++++|||| |.+++.+++++|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~ 152 (338)
T cd06502 77 HETAHIYTDEAGAPEFLSGVKLLPVPGE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAIS 152 (338)
T ss_pred ecCcceeeecCCcHHHHcCceEEeecCC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHH
Confidence 9999875432 344589999999873 2 6799999999997521 25788889999998 6677999999999
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHh
Q 012628 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR 335 (459)
Q Consensus 256 ~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~ 335 (459)
++|++||+++|+||+|.......... .+... ....+ +++.|+||.|+++| |++ +..+++.++.+......
T Consensus 153 ~~~~~~~~~livDea~~~~~~~~~~~---~~~~~-~~~~d-~~~~s~sK~~~~~~---g~~--~~~~~~~~~~~~~~~~~ 222 (338)
T cd06502 153 ALAKENGLPLHLDGARLANAAAALGV---ALKTY-KSGVD-SVSFCLSKGGGAPV---GAV--VVGNRDFIARARRRRKQ 222 (338)
T ss_pred HHHHHcCCeEeechHHHHHHHHhcCC---CHHHH-HhcCC-EEEEeccccCCCcc---ceE--EECCHHHHHHHHHHHHH
Confidence 99999999999999975432110001 11111 12223 56889999999887 654 23477755555433221
Q ss_pred hccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeee-cCCCH
Q 012628 336 LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF-TGLNK 414 (459)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~-~~l~~ 414 (459)
. ....+.+.+.+.++...|++..+ .+..+++.++++++.+.|+ ++| +.+..+.++++++ ...+.
T Consensus 223 ~--~~~~~~~~~~~~a~~~~L~~~~~--------~~~~~~~~~~~~~l~~~L~-~~~----~~~~~~~~~~~~v~~~~~~ 287 (338)
T cd06502 223 A--GGGMRQSGFLAAAGLAALENDLW--------LRRLRHDHEMARRLAEALE-ELG----GLESEVQTNIVLLDPVEAN 287 (338)
T ss_pred h--CCChhhHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHHHHHHHH-hcC----CCcccccCCeEEEecCCcc
Confidence 1 11123455666666667765432 2445677777899999999 887 3555566665432 22222
Q ss_pred HHHHHHHh------cccEEEcCCC----cEEEccC-ChhhHHHHHHHHHH
Q 012628 415 AQSDNMTN------KWHVYMTKDG----RISLAGL-SLAKCEYLADAIID 453 (459)
Q Consensus 415 ~~~~~ll~------~~gI~v~~gg----Ris~~~~-~~e~i~~~~~~l~~ 453 (459)
.....+++ ++||.+.+.+ ||+.+.. ++++++++++++++
T Consensus 288 ~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 288 AVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 33333332 4699887653 9988755 88999999999865
No 132
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=1.2e-26 Score=232.16 Aligned_cols=333 Identities=13% Similarity=0.034 Sum_probs=216.8
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...|||..|.+-+..+. -.|.+.+++.+.+.... +....+..++++.+++++....+ .+++++ ++||+
T Consensus 38 g~~~iD~~~g~~~~~lG~--~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~~--~~gg~ 106 (396)
T PRK02627 38 GKEYLDFLAGIAVNNLGH--CHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELSG----MDKVFF--CNSGA 106 (396)
T ss_pred CCEEEECCccHHhccCCC--CCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhcC----CCEEEE--CCCcH
Confidence 357899999877333333 25889999888775421 11112235677777777765543 478999 99999
Q ss_pred hHHHHHHHHHHHhCC-----CCEEEEcCCCCcchHHHhhhCCCCee----eeeeecCCCC----CCCHHHHHHHHHcCCC
Q 012628 162 GSLRLAAALIERYFP-----GAKVLISSPTWGNHKNIFNDARVPWS----EYRYYDPKTV----GLDFEGMIADIKAAPG 228 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~-----gd~Vlv~~p~y~~~~~~~~~~G~~v~----~v~~~~~~~~----~~d~e~l~~~i~~~~~ 228 (459)
+|+.++.+++..... .++|++..++|.++.......+.... ..++. .++ ..|++.+++.+.+
T Consensus 107 eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~--- 181 (396)
T PRK02627 107 EANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITD--- 181 (396)
T ss_pred HHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCC---
Confidence 999999776543332 17899999999877655444332211 11111 111 1289999998864
Q ss_pred CcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 229 GSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG-~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
+++++++++++||+| .+++++.+++|.++|++||+++|+||+|.++++.+ ..++... ....+++ .+|||.++
T Consensus 182 ~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g---~~~~~~~-~~~~pdi---~t~sK~~~ 254 (396)
T PRK02627 182 KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG---KLFAYQH-YGIEPDI---MTLAKGLG 254 (396)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC---ceeeehh-cCCCCCE---EEEcchhh
Confidence 678888888899999 68899999999999999999999999999887542 1112111 1222333 37999999
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 387 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 387 (459)
+|+|+||+++ +++ +.+.+.......+.+.+.++|.++...|+.... +...++++++.+.+.+.|
T Consensus 255 -~G~rig~~~~---~~~----~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--------~~~~~~~~~~~~~~~~~l 318 (396)
T PRK02627 255 -GGVPIGAVLA---KEK----VADVFTPGDHGSTFGGNPLACAAALAVIEIIEE--------EGLLENAAEVGEYLRAKL 318 (396)
T ss_pred -CCcccEEEEE---cHH----HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh--------ccHHHHHHHHHHHHHHHH
Confidence 9999999976 777 344443322233346677788887766653211 122333344444444444
Q ss_pred hh---ccCCCCCcccccCCcceeeecCC---CHHHHHHHHhcccEEEcCCC----cEEEc-cCChhhHHHHHHHHHHHHh
Q 012628 388 SA---KDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 388 ~~---~~g~~~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~e~i~~~~~~l~~~~~ 456 (459)
.+ +++. +..+.. .|.++|+.+ ..+++++++++ ||.+.|++ ||+++ ..+++++++++++|+++++
T Consensus 319 ~~~~~~~~~---~~~~~~-~g~~~~i~~~~~~~~~~~~l~~~-Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~ 393 (396)
T PRK02627 319 RELLEKYPG---IKEVRG-LGLMIGIELDRPAAEIVKKALEK-GLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLK 393 (396)
T ss_pred HHHHHhCCC---eeeecc-CcEEEEEEecCcHHHHHHHHHHC-CeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHHH
Confidence 30 3321 222223 466777754 24567777775 99999875 88764 3489999999999999987
Q ss_pred hc
Q 012628 457 NV 458 (459)
Q Consensus 457 ~~ 458 (459)
++
T Consensus 394 ~~ 395 (396)
T PRK02627 394 EL 395 (396)
T ss_pred hh
Confidence 64
No 133
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=1.6e-26 Score=228.51 Aligned_cols=289 Identities=12% Similarity=0.028 Sum_probs=194.4
Q ss_pred cHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeee
Q 012628 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY 207 (459)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~ 207 (459)
+.++++.+|+++.. +.+.+ ++|+++++..+ +...+.+||+|+++.+.|......++..|++++.+|.+
T Consensus 53 ~~~~~e~lA~~~g~--------~~~~i--~~g~~~a~~~~--~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 53 IHDFLEDLAEFLGM--------DEARV--THGAREGKFAV--MHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred HHHHHHHHHHHhCC--------CceEE--ECChHHHHHHH--HHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 56888999999643 34556 79999999988 44446799999999888655446778999999999986
Q ss_pred cCCCCCCCHHHHHHHHHcCC----CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012628 208 DPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (459)
Q Consensus 208 ~~~~~~~d~e~l~~~i~~~~----~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~ 283 (459)
++.++.+|++++++.+++.. ++++++++++|+||||.. .++++|+++|+++|+++|+||+|.....+ .+
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~---~~l~~i~~la~~~~~~livDea~~~g~~~---~~- 193 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNL---PDAGKVAKVCREKGVPLLLNCAYTVGRMP---VS- 193 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccc---cCHHHHHHHHHHcCCeEEEECccccCCcC---CC-
Confidence 44568899999999986411 256788889999999998 66778999999999999999998764321 11
Q ss_pred hHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhcc----ccccCCchHHHHHHHHHhCCh
Q 012628 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLAR----PMYSNPPVHGARIVANVVGNP 359 (459)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~L~~~ 359 (459)
.. ..+..++++||||.++ +|.|+||+++ +++.++.+......... .........++.++...+.+
T Consensus 194 --~~----~~~~di~v~s~sK~~~-~~g~~G~l~~---~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~- 262 (370)
T TIGR02539 194 --AK----EIGADFIVGSGHKSMA-ASGPCGVLGM---SEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH- 262 (370)
T ss_pred --HH----HcCCCEEEeeCccccc-CCCCEEEEEE---CHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH-
Confidence 11 1124567799999999 5778999976 77855554432211000 00011111122223223321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc--cCCcceeeecCCC------------H-HHHHHHHhcc
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI--LRQIGMFSFTGLN------------K-AQSDNMTNKW 424 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~--~~~~g~f~~~~l~------------~-~~~~~ll~~~ 424 (459)
+.+.++...+.++. ++++.+.|+ ++| ++.+ .+..+.|+++... . .+.++|.+ +
T Consensus 263 -----~~~~l~~~~~~~~~-~~~l~~~L~-~~g----~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e-~ 330 (370)
T TIGR02539 263 -----VVERVKRWDEEVKK-TRWFVAELE-DIG----FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKK-R 330 (370)
T ss_pred -----HHHHHHHHHHHHHH-HHHHHHHHH-hCC----cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHh-C
Confidence 12334445555555 458999999 887 4532 2344556655321 1 23445554 6
Q ss_pred cEE-EcCCC----cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 425 HVY-MTKDG----RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 425 gI~-v~~gg----Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
||. ++++. ||++.+.+++++++++++|+++++++
T Consensus 331 GI~~ir~~~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 331 GIHGIRSGQTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred CCccccCCcceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 997 77753 88864449999999999999998764
No 134
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=1.8e-26 Score=232.57 Aligned_cols=331 Identities=15% Similarity=0.100 Sum_probs=219.2
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCC--C---CCC---CcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--E---YLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~---Y~~---~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+.+.|..+.. .+.++.|.+++.+.+...... . |.. ...++++|+.++++++.. ++++|++
T Consensus 32 ~~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~- 99 (424)
T PLN02855 32 KLVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINAS-----TSREIVF- 99 (424)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCEEEE-
Confidence 3566665543 345888999998876432101 1 110 123568999999997653 1578999
Q ss_pred ecccchhHHHHHHHHHH--HhCCCCEEEEcCCCCcc----hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCC
Q 012628 156 QGLSGTGSLRLAAALIE--RYFPGAKVLISSPTWGN----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~--~~~~gd~Vlv~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 229 (459)
|.|+|++++++...+. .+.+||+|+++++.|+. |...++..|++++.+|++ .++.+|++.+++.+++ +
T Consensus 100 -t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~--~~~~~~~~~l~~~i~~---~ 173 (424)
T PLN02855 100 -TRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT--PDEVLDVEQLKELLSE---K 173 (424)
T ss_pred -eCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHHhcc---C
Confidence 9999999999854332 35689999999997763 455667789999999984 3456999999999975 7
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (459)
++++++++++||||.+++ +++|+++|+++|+++++|++|. ++.... . +...+.++++.|++|.+|++
T Consensus 174 t~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~-~g~~~~-----~----~~~~~~d~~~~s~~K~~gp~ 240 (424)
T PLN02855 174 TKLVATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQS-VPHMPV-----D----VQTLGADFLVASSHKMCGPT 240 (424)
T ss_pred ceEEEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhh-cCCcCC-----C----chhcCCCEEEeecccccCCC
Confidence 889999999999999965 5678999999999999999964 322111 1 12223467899999998877
Q ss_pred CCCcceEEEEeCChhHHHHHHHHHHhh----------------ccccccCCchHHHHHH-HHHhCChhhHHHHHHHHHHH
Q 012628 310 AERIGAMNVVCSSSDLAARVKSQLKRL----------------ARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMM 372 (459)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~-~~~L~~~~~~~~~~~~~~~~ 372 (459)
| +||+++ +++.++.+....... ......+.+.+...++ ...++ +.. +..++++
T Consensus 241 G--~G~l~~---~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~---~~~--~~g~~~i 310 (424)
T PLN02855 241 G--IGFLWG---KSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAID---YLS--EIGMDRI 310 (424)
T ss_pred c--cEEEEE---chhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHH---HHH--HhCHHHH
Confidence 7 899977 666443321110000 0001112233332222 22221 111 1246788
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccccC-------Ccceeee--cCCCHHHH-HHHHhcccEEEcCC-----------
Q 012628 373 AGRIKNVRQKLFDSLSAKDKSGKDWSFILR-------QIGMFSF--TGLNKAQS-DNMTNKWHVYMTKD----------- 431 (459)
Q Consensus 373 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-------~~g~f~~--~~l~~~~~-~~ll~~~gI~v~~g----------- 431 (459)
+++.+++++++++.|+ ++. +++++.+ .++++.+ .+.+.+.+ ..|.+++||.++.|
T Consensus 311 ~~~~~~l~~~l~~~L~-~~~---g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~ 386 (424)
T PLN02855 311 HEYEVELGTYLYEKLS-SVP---GVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYL 386 (424)
T ss_pred HHHHHHHHHHHHHHHh-cCC---CEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHh
Confidence 8899999999999998 762 1444432 2344433 24555544 45545459998853
Q ss_pred ---C--cEEEccC-ChhhHHHHHHHHHHHHhhcC
Q 012628 432 ---G--RISLAGL-SLAKCEYLADAIIDSYHNVS 459 (459)
Q Consensus 432 ---g--Ris~~~~-~~e~i~~~~~~l~~~~~~~~ 459 (459)
+ |||+..+ +++|+++++++|++++++++
T Consensus 387 g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 387 GVNASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 9999766 88999999999999987653
No 135
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=6.6e-26 Score=227.44 Aligned_cols=327 Identities=15% Similarity=0.100 Sum_probs=216.0
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC------CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN------KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
...++|+...|+ +... +|.+++++.+.++.... ..|.......+|++.+++++.. ++.|++
T Consensus 46 ~~~~~~~sn~yl---~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-------~~~i~~-- 112 (410)
T PRK13392 46 RRVTIWCSNDYL---GMGQ-HPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-------ESALLF-- 112 (410)
T ss_pred ceEEEEECCCcc---CCCC-CHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-------CCEEEE--
Confidence 457888886662 3433 78899999887754210 1232233467899999999642 456666
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC-CCCcEEEEe
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLH 235 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~ii~ 235 (459)
++ |++++..+...+..+.+||.|++..+.|..+...++..|+++..++.. |++.+++.++.. .++++++++
T Consensus 113 ~s-G~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~~t~~v~i 184 (410)
T PRK13392 113 TS-GYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVDPDRPKLIAF 184 (410)
T ss_pred Cc-HHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhccCCCCEEEEE
Confidence 54 566766664333223488988887777777777778889887766531 455666666532 246889999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC-eEEEEEcCCcCcccCCCCcc
Q 012628 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELLVAQSYSKNLGLYAERIG 314 (459)
Q Consensus 236 ~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~G~RiG 314 (459)
++|+||||.+++ +++|.++|++||+++|+||+|....++.. ...+.......+ ..++++||||.||++| |
T Consensus 185 ~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~---g~g~~~~~~~~~~~div~~tlsK~~g~~G---G 255 (410)
T PRK13392 185 ESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGAR---GGGIAERDGLMDRIDMIQGTLAKAFGCLG---G 255 (410)
T ss_pred eCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCC---CCchhhhccCCCCCcEEEEEChHhhhccc---c
Confidence 999999999965 77899999999999999999873332211 111111111112 2488899999999988 8
Q ss_pred eEEEEeCChhHHHHHHHHHHhhcccc--ccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 315 AMNVVCSSSDLAARVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
|+++ +++.++.+. ...... ....+..++.++...|+... .....+++++++++++.+.|+ ++|
T Consensus 256 ~~~~---~~~~~~~l~----~~~~~~~~s~~~~~~~~~a~~aaL~~~~-------~~~~~~~~~~~~~~~l~~~L~-~~g 320 (410)
T PRK13392 256 YIAA---SADLIDFVR----SFAPGFIFTTALPPAVAAGATAAIRHLK-------TSQTERDAHQDRVAALKAKLN-ANG 320 (410)
T ss_pred hhhc---CHHHHHHHH----HhCcchhccCcCCHHHHHHHHHHHHHHh-------cCHHHHHHHHHHHHHHHHHHH-HcC
Confidence 8854 777444433 322221 22334455555555554221 123455778889999999999 887
Q ss_pred CCCCcccccCCccee-eecCCC---HHHHHHHHhcccEEEcCC-------C----cEEEccC-ChhhHHHHHHHHHHHHh
Q 012628 393 SGKDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTKD-------G----RISLAGL-SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 393 ~~~~~~~~~~~~g~f-~~~~l~---~~~~~~ll~~~gI~v~~g-------g----Ris~~~~-~~e~i~~~~~~l~~~~~ 456 (459)
+++.+++++++ ++++.. .++.++|++++||.+.+. | ||++... +++++++++++|.++.+
T Consensus 321 ----~~~~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~ 396 (410)
T PRK13392 321 ----IPVMPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWD 396 (410)
T ss_pred ----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 56666777765 555542 245667876679998753 2 8887533 89999999999999887
Q ss_pred hc
Q 012628 457 NV 458 (459)
Q Consensus 457 ~~ 458 (459)
++
T Consensus 397 ~~ 398 (410)
T PRK13392 397 RL 398 (410)
T ss_pred Hc
Confidence 64
No 136
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=1.1e-26 Score=231.08 Aligned_cols=329 Identities=12% Similarity=0.073 Sum_probs=219.4
Q ss_pred cCCCCCCccCcHHHHHHHHHHhhcCC-----CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHH
Q 012628 93 YRTEELQPYVLDVVKKAENLMLERGE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 167 (459)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~~~-----~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~ 167 (459)
|+|..+.+++++.|.+++.+.+.... .+.| +..+.+.++++++++.... +. .++++|++ |+|+|++++++
T Consensus 2 yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~~-~~-~~~~~i~~--t~g~teal~~~ 76 (382)
T TIGR03403 2 YLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKGI-NA-RDLDDIII--TSCATESNNWV 76 (382)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHHc-Cc-CCCCeEEE--eCCHHHHHHHH
Confidence 56777777778999999988875321 1223 2356678888888886432 21 14789999 99999999998
Q ss_pred HHHHHH---hCC-CCEEEEcCCCCcchHH---HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 168 AALIER---YFP-GAKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 168 ~~~~~~---~~~-gd~Vlv~~p~y~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
...+.. +.+ +++|+++.+.|+.+.. .++..|++++.+|++ +++.+|++.+++++++ +++++++++|||
T Consensus 77 ~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~--~~g~~d~~~l~~~i~~---~t~lv~~~~~~n 151 (382)
T TIGR03403 77 LKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN--EQGTITAEQVREAITE---KTALVSVMWANN 151 (382)
T ss_pred HHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC--CCCCCCHHHHHHhccc---CCeEEEEEcccC
Confidence 443311 145 4789999866665543 456789999999984 4568899999999975 678888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+++ +++|.++|+++|+++++|+++ .++.-+.+ ....+.++++.|++|.+|++| +|++++ .
T Consensus 152 ~tG~~~~---~~~I~~la~~~g~~~ivD~a~-~~g~~~~~---------~~~~~~D~~~~s~~K~~gp~G--~g~l~v-r 215 (382)
T TIGR03403 152 ETGMIFP---IKEIGEICKERGVLFHTDAVQ-AIGKIPVD---------VQKAGVDFLSFSAHKFHGPKG--VGGLYI-R 215 (382)
T ss_pred CCccccC---HHHHHHHHHHcCCEEEEechh-hcCCCccC---------ccccCCCEEEEcchhhCCCCc--eEEEEE-C
Confidence 9999965 567889999999999999994 44322111 112234588899999999888 688865 2
Q ss_pred CChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 321 SSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
.... .................+++..++.++...++. . .+.++...++++++++++.+.|+ +++ ++.+.
T Consensus 216 ~~~~-~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~---~---~~~~~~~~~~~~~l~~~l~~~L~-~~~---~~~~~ 284 (382)
T TIGR03403 216 KGVE-LTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRL---A---NEYLDFEKSHVRRLRDRLEDALL-ELP---DVFVV 284 (382)
T ss_pred CCCC-CCCcccCCCCCCCcccCCcChHHHHHHHHHHHH---H---HHhHHHHHHHHHHHHHHHHHHHh-cCC---CEEEE
Confidence 1111 001100000000011224455555444444421 1 23367778899999999999998 753 25555
Q ss_pred cCC----cce--eeecCCCHHHHHHHHhcccEEEcCC-------------------------C--cEEEccC-ChhhHHH
Q 012628 401 LRQ----IGM--FSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAGL-SLAKCEY 446 (459)
Q Consensus 401 ~~~----~g~--f~~~~l~~~~~~~ll~~~gI~v~~g-------------------------g--Ris~~~~-~~e~i~~ 446 (459)
.+. .++ |.+.+++.+.+...+.++||.++.| | |+|++.. |++|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~ 364 (382)
T TIGR03403 285 GDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDY 364 (382)
T ss_pred CCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHH
Confidence 432 122 3334556655444456679999842 3 9998876 8899999
Q ss_pred HHHHHHHHHhhc
Q 012628 447 LADAIIDSYHNV 458 (459)
Q Consensus 447 ~~~~l~~~~~~~ 458 (459)
++++|+++++++
T Consensus 365 ~~~~l~~~~~~~ 376 (382)
T TIGR03403 365 TIEVFKKAVQRL 376 (382)
T ss_pred HHHHHHHHHHHH
Confidence 999999988765
No 137
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=7.5e-26 Score=225.51 Aligned_cols=325 Identities=14% Similarity=0.072 Sum_probs=214.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--CCCCCCCcc----cHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g----~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+.+.|||+.|.++ ++.+ +|.+.+++.+.+.... ...|....| ..++++++++++. . ++.+++
T Consensus 38 g~~~id~~~~~~~---g~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-~------~~~i~~- 105 (385)
T PRK05958 38 GRRMLNFASNDYL---GLAR-HPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG-A------ERALLF- 105 (385)
T ss_pred CceEEEeeCCCcc---cCCC-CHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-C------CcEEEE-
Confidence 5689999998642 3322 7889999988775411 112222223 4667777777753 1 454554
Q ss_pred ecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEe
Q 012628 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 235 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~ 235 (459)
++|++++..+ +...+.+||+|+++.|+|+.+...++..|++++.+|. .|++.+++.+++.++.++++++
T Consensus 106 --~~g~~~~~~~--l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~ 174 (385)
T PRK05958 106 --SSGYAANLAV--LTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVT 174 (385)
T ss_pred --CcHHHHHHHH--HHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEE
Confidence 5566666655 3334679999999999999999988889999888765 3789999988763234677778
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcce
Q 012628 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 315 (459)
Q Consensus 236 ~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 315 (459)
++++||||.. .++++|+++|++||+++|+||+|....++......... ......++++++.||||.++++| ||
T Consensus 175 ~~~~~~~G~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G---g~ 247 (385)
T PRK05958 175 ESVFSMDGDL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAE-AGLAGEPDVILVGTLGKALGSSG---AA 247 (385)
T ss_pred EecccCCCCc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHh-hCCCCCCceEEEEechhhcccCC---cE
Confidence 8899999988 66889999999999999999998654332111111110 11233467899999999999877 88
Q ss_pred EEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012628 316 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 395 (459)
Q Consensus 316 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 395 (459)
+++ +++..+.+....... ....+++...+.++...|+.. .. .++.++++.++++++.+.|+ +++
T Consensus 248 ~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~aal~~~------~~-~~~~~~~~~~~~~~l~~~L~-~~~--- 311 (385)
T PRK05958 248 VLG---SETLIDYLINRARPF--IFTTALPPAQAAAARAALRIL------RR-EPERRERLAALIARLRAGLR-ALG--- 311 (385)
T ss_pred EEc---CHHHHHHHHHhCccc--eecCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHHHHHH-HcC---
Confidence 755 777444433211111 111123333333333333211 01 14567889999999999999 876
Q ss_pred CcccccCCcceeeecCCC-----HHHHHHHHhcccEEEcCC-------C----cEEEcc-CChhhHHHHHHHHHHHH
Q 012628 396 DWSFILRQIGMFSFTGLN-----KAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLADAIIDSY 455 (459)
Q Consensus 396 ~~~~~~~~~g~f~~~~l~-----~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~e~i~~~~~~l~~~~ 455 (459)
+++..+.++++ |+.+. .++.+.|.+ +||.+.++ | ||+++. .+++++++++++|++++
T Consensus 312 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 312 -FQLMDSQSAIQ-PLIVGDNERALALAAALQE-QGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred -CCcCCCCCCEE-EEEeCCHHHHHHHHHHHHH-CCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 46666666644 43331 245666665 69999752 2 999974 38999999999998763
No 138
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.7e-25 Score=220.31 Aligned_cols=326 Identities=17% Similarity=0.160 Sum_probs=234.2
Q ss_pred ccCCCCCCccCcHHHHHHHHHHhhc----CCCCCCCC----CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 92 AYRTEELQPYVLDVVKKAENLMLER----GENKEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 92 ~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~----~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
.|+|+......|..|.+++.+.+.. .+...|.. ..-+++.|+.++++++... .++|++ |.|+|++
T Consensus 24 vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~-----~~eIvf--t~~tT~a 96 (405)
T COG0520 24 VYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADS-----SDEIVF--TRGTTEA 96 (405)
T ss_pred EEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCC-----CCeEEE--eCChhHH
Confidence 3445555555689999999987632 11112221 2356899999999987651 388999 9999999
Q ss_pred HHHHHHHHHH-hCCCCEEEEcCCCCc----chHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCC
Q 012628 164 LRLAAALIER-YFPGAKVLISSPTWG----NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (459)
Q Consensus 164 ~~l~~~~~~~-~~~gd~Vlv~~p~y~----~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p 238 (459)
+++++..+.. +.+||+|++..--|+ ++....+..|++++.+|++ +++.+|.+.++..+++ +|+++.++..
T Consensus 97 ln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~---~Tklvais~v 171 (405)
T COG0520 97 LNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITP---KTKLVALSHV 171 (405)
T ss_pred HHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCC---CceEEEEECc
Confidence 9998665543 578999999997775 4555666789999999994 5678999999998876 8999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCc-CcccCCCCcceEE
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK-NLGLYAERIGAMN 317 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~~~G~RiG~~~ 317 (459)
+|.||++ .++++|+++|+++|+++++|.+ |...+.+.+ +...+.++++.|.+| .+|+.| +|.++
T Consensus 172 Sn~tG~~---~pv~~I~~la~~~ga~v~VDaa-q~~~h~~id---------v~~l~~Df~afsgHKwl~gP~G--iGvLy 236 (405)
T COG0520 172 SNVTGTV---NPVKEIAELAHEHGALVLVDAA-QAAGHLPID---------VQELGCDFLAFSGHKWLLGPTG--IGVLY 236 (405)
T ss_pred ccccccc---chHHHHHHHHHHcCCEEEEECc-cccCccCCC---------chhcCCCEEEEcccccccCCCc--eEEEE
Confidence 9999999 8899999999999999999999 666654322 244567899999999 888778 89998
Q ss_pred EEeCChhHHHHHHHHHH-----------------hhccccccCCchHHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012628 318 VVCSSSDLAARVKSQLK-----------------RLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNV 379 (459)
Q Consensus 318 ~v~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~ 379 (459)
+ .++.++.+..... ..-.....+++.+.+.+. ...+ ++.++ ..++++.++.+++
T Consensus 237 ~---r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl---~~~~~--ig~~~i~~~e~~L 308 (405)
T COG0520 237 V---RKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAAL---DYLLE--IGMEAIEAHEREL 308 (405)
T ss_pred E---chHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHH---HHHHH--HhHHHHHHHHHHH
Confidence 7 7775544311000 000011123334333333 2222 22222 2367889999999
Q ss_pred HHHHHHHHhhccCCCCCcccccC----Ccceeee--cCCCHHHHHHHHhcccEEEcCCC----------------cEEEc
Q 012628 380 RQKLFDSLSAKDKSGKDWSFILR----QIGMFSF--TGLNKAQSDNMTNKWHVYMTKDG----------------RISLA 437 (459)
Q Consensus 380 ~~~l~~~L~~~~g~~~~~~~~~~----~~g~f~~--~~l~~~~~~~ll~~~gI~v~~gg----------------Ris~~ 437 (459)
.+++.+.|+ +++. ++++.+ .++.+.| .++....+...|.++||.++.|. |+|++
T Consensus 309 ~~~~~~~L~-~~~~---v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~ 384 (405)
T COG0520 309 TEYLLEGLS-ELPG---VEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLH 384 (405)
T ss_pred HHHHHHHHh-cCCC---eEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEe
Confidence 999999999 7642 555544 3566555 36666666666666799998871 99988
Q ss_pred cC-ChhhHHHHHHHHHHHHh
Q 012628 438 GL-SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 438 ~~-~~e~i~~~~~~l~~~~~ 456 (459)
.+ |+|||++++++|+++.+
T Consensus 385 ~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 385 LYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred ecCCHHHHHHHHHHHHHHhh
Confidence 77 88999999999998764
No 139
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=1.4e-25 Score=220.52 Aligned_cols=320 Identities=16% Similarity=0.087 Sum_probs=211.0
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCC---C----CCCcccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE---Y----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---Y----~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
.+++|+...|+ |.+- +|+|.+++++.++... .+ | .......++++.+++++.. ++ .++
T Consensus 2 ~~~~~~~~~~~---~~~~-~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~la~~~~~-------~~-~iv-- 66 (349)
T cd06454 2 KVLNFCSNDYL---GLAN-HPEVIEAAKEALDKYG-VGAGGSRLISGTSDLHEELEEELAEFHGK-------EA-ALV-- 66 (349)
T ss_pred CceecccCCcc---ccCC-CHHHHHHHHHHHHHhC-CCCCCcCeecCCchHHHHHHHHHHHHhCC-------CC-EEE--
Confidence 35677766653 4443 6889999999886421 21 2 2234457888888888643 23 344
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC--CCCcEEEE
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILL 234 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~--~~~~~~ii 234 (459)
+++|++++..+ +...+.+||+|++++|+|..+...++..|++++.++. +|++.+++.+++. ++++++++
T Consensus 67 ~~sg~~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~ 137 (349)
T cd06454 67 FSSGYAANDGV--LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIV 137 (349)
T ss_pred eccHHHHHHHH--HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEE
Confidence 56667787765 3444679999999999999988888899999887753 4778888888753 24678888
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH-HhcCCeEEEEEcCCcCcccCCCCc
Q 012628 235 HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERI 313 (459)
Q Consensus 235 ~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~Ri 313 (459)
+++++||||.. .++++|+++|+++|+++|+|++|.....+.. .. ..... ....+.+++++|+||.++++|
T Consensus 138 ~~~~~~~tG~~---~~~~~i~~~~~~~~~~livD~a~~~g~~~~~-~~--~~~~~~~~~~~~~i~~~s~sK~~~~~g--- 208 (349)
T cd06454 138 TEGVYSMDGDI---APLPELVDLAKKYGAILFVDEAHSVGVYGPH-GR--GVEEFGGLTDDVDIIMGTLGKAFGAVG--- 208 (349)
T ss_pred EeccccCCCCc---cCHHHHHHHHHHcCCEEEEEccccccccCCC-CC--ChhhhccccccCcEEEeechhhhcccC---
Confidence 89999999998 6688999999999999999999764222111 11 11111 123356899999999998755
Q ss_pred ceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 012628 314 GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 393 (459)
Q Consensus 314 G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 393 (459)
||++. +++..+.+........ .....+...+.++...|+.. .+ .+..+++++++++.+.+.|. ++|
T Consensus 209 G~i~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~------~~-~~~~~~~~~~~~~~l~~~l~-~~g- 274 (349)
T cd06454 209 GYIAG---SKELIDYLRSYARGFI--FSTSLPPAVAAAALAALEVL------QG-GPERRERLQENVRYLRRGLK-ELG- 274 (349)
T ss_pred CEEEC---CHHHHHHHHHhchhhh--ccCCCCHHHHHHHHHHHHHH------hc-CHHHHHHHHHHHHHHHHHHH-hcC-
Confidence 88754 6775555443322111 11123333333333333211 11 35667899999999999999 876
Q ss_pred CCCcccccCCcceeeec-C---CC-HHHHHHHHhcccEEEcCC---------C--cEEEcc-CChhhHHHHHHHHHHH
Q 012628 394 GKDWSFILRQIGMFSFT-G---LN-KAQSDNMTNKWHVYMTKD---------G--RISLAG-LSLAKCEYLADAIIDS 454 (459)
Q Consensus 394 ~~~~~~~~~~~g~f~~~-~---l~-~~~~~~ll~~~gI~v~~g---------g--Ris~~~-~~~e~i~~~~~~l~~~ 454 (459)
+....+.++++.+. . .+ .++.+.|+++ ||.+.++ + ||+++. .+++++++++++|+++
T Consensus 275 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 275 ---FPVGGSPSHIIPPLIGDDPAKAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ---CcccCCCCCcEEEEeCCChHHHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 45554444443332 1 22 3445666665 9998652 2 999875 3899999999999764
No 140
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=2.9e-25 Score=206.79 Aligned_cols=314 Identities=20% Similarity=0.149 Sum_probs=209.0
Q ss_pred CCC-CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh---C-C----------CCEEEEcC
Q 012628 120 KEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---F-P----------GAKVLISS 184 (459)
Q Consensus 120 ~~Y-~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~---~-~----------gd~Vlv~~ 184 (459)
.+| +-..|++++|+..++.+... +++|+ .||+.+++++..++... . + .-+.|+|.
T Consensus 62 RNY~G~l~Gipe~r~l~a~llgv~------~~~vi----v~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPv 131 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELLGVP------PENVI----VGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPV 131 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHHTS-------GGGEE----E-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEE
T ss_pred cCCCCccCChHHHHHHHHHHhCCC------HHHEE----EeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecC
Confidence 579 88999999999999998544 78885 48888998876665432 1 1 23799999
Q ss_pred CCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHH-HHhcCC
Q 012628 185 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADV-IQEKNH 263 (459)
Q Consensus 185 p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l-~~~~~~ 263 (459)
|+|..|..+++.+|++.+.||+++ .++|.|.+++.+.+.+...-+..++..+||||+++|.+..++++.+ ....++
T Consensus 132 PGYDRHFai~E~~Giemi~VpM~~---dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DF 208 (425)
T PF12897_consen 132 PGYDRHFAITEHFGIEMIPVPMTE---DGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDF 208 (425)
T ss_dssp S--HHHHHHHHHCT-EEEEEEEET---TEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-
T ss_pred CCchHHHHHHHhhCcEEEecCCCC---CCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCe
Confidence 999999999999999999999973 3699999999987644444456677789999999999999999988 345899
Q ss_pred eeEEeccCCCCCC-CCCCCCh-hHHHHH---HhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhcc
Q 012628 264 IPFFDVAYQGFAS-GSLDNDA-SSVRLF---ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLAR 338 (459)
Q Consensus 264 ~ii~Deay~~~~~-~~~~~~~-~~~~~~---~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~ 338 (459)
.|+-|+||.-... ++.+... ..+... ....++++...|.||+-- ||-+++++.. +++.++.+.+.+..
T Consensus 209 RI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf-~GaGva~~aa---S~~Nl~~~~~~~~~--- 281 (425)
T PF12897_consen 209 RIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITF-PGAGVAFFAA---SEANLAWIKKHLSV--- 281 (425)
T ss_dssp EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE----HHHHHHHHHHHHH---
T ss_pred EEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccccc-CCcceeeeec---CHHHHHHHHHHhcC---
Confidence 9999999965443 2111111 122222 224569999999999874 8988999866 88888888777653
Q ss_pred ccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeeecCC---CH
Q 012628 339 PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL---NK 414 (459)
Q Consensus 339 ~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~~~l---~~ 414 (459)
.+.++.-+.|..-..+|.+.+ ...+++|++.++.++-+.+.+.+.|++++| ..+..++..|+||||++++. +.
T Consensus 282 -~tIgpdKvNQLRHvrff~d~~--gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G~A 358 (425)
T PF12897_consen 282 -QTIGPDKVNQLRHVRFFKDAE--GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDGTA 358 (425)
T ss_dssp -H-S---HHHHHHHHHHHHSHH--THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-H
T ss_pred -ceeCccHHHHHHHHHHhcChh--hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCChH
Confidence 355888999999999998743 122678999999999999999999985666 22334677899999998754 45
Q ss_pred HHHHHHHhcccEEEcCCC--------------cEEEccCChhhHHHHHHHHHHHHh
Q 012628 415 AQSDNMTNKWHVYMTKDG--------------RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 415 ~~~~~ll~~~gI~v~~gg--------------Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
..+..|.++.||.++|.| ||+.+..+.||++.+++.+.-.++
T Consensus 359 krvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 359 KRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp HHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 667777778899999964 998888788999999998877665
No 141
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.95 E-value=1e-25 Score=225.79 Aligned_cols=329 Identities=15% Similarity=0.185 Sum_probs=216.1
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcC------CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG------ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
...++|..|.. +++|.|++++...+... ....|....+.+++++.+++++....|.. ..+|++
T Consensus 19 ~~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~-- 87 (402)
T cd00378 19 RETLELIASEN-------FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQP-- 87 (402)
T ss_pred HhCeeeeccCC-------cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeec--
Confidence 45788877653 24889999998755211 12345566677778876555544333432 344544
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-----hhhCCCCeeeeeeecC-CCCCCCHHHHHHHHHcCCCCc
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-----FNDARVPWSEYRYYDP-KTVGLDFEGMIADIKAAPGGS 230 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~-----~~~~G~~v~~v~~~~~-~~~~~d~e~l~~~i~~~~~~~ 230 (459)
+ ||++++.++ +...+.|||+|++++|+|..+... ++..|.+++.+++..+ +++.+|++++++.+.. +++
T Consensus 88 ~-sgt~a~~~~--l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~--~~~ 162 (402)
T cd00378 88 H-SGSQANLAV--YFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE--FKP 162 (402)
T ss_pred C-CcHHHHHHH--HHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh--CCC
Confidence 4 678999887 444477999999999999876543 5667888877777433 2689999999999864 256
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccC-CCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC
Q 012628 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAY-QGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 231 ~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (459)
+++++++++||+ . .++++|+++|++||+++|+|++| .++.+.+. .... .. . ..++++|+||.+ +
T Consensus 163 ~~v~~~~~~~~~--~---~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~--~~~~----~~-~-~dv~~~s~sK~l--~ 227 (402)
T cd00378 163 KLIVAGASAYPR--P---IDFKRFREIADEVGAYLLVDMAHVAGLVAGGV--FPNP----LP-G-ADVVTTTTHKTL--R 227 (402)
T ss_pred CEEEecCcccCC--C---cCHHHHHHHHHhcCCEEEEEccchhhhhhccc--CCCc----cc-C-CcEEEeccccCC--C
Confidence 778888888874 3 46889999999999999999994 44433221 0001 11 2 247899999987 7
Q ss_pred CCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012628 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 389 (459)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 389 (459)
|+|.||++. .+++..+.+...... ...+++....+.++...+.. .. ....++.+++++++++++.+.|+
T Consensus 228 G~~gg~i~~--~~~~~~~~l~~~~~~---~~~~~~~~~~~~a~~~al~~--~~---~~~~~~~~~~~~~~~~~l~~~L~- 296 (402)
T cd00378 228 GPRGGLILT--RKGELAKKINSAVFP---GLQGGPHLHVIAAKAVALKE--AL---EPEFKAYAKQVVENAKALAEALK- 296 (402)
T ss_pred CCCceEEEe--ccHHHHHHHHHHhCc---cccCCchHHHHHHHHHHHHH--Hh---hHHHHHHHHHHHHHHHHHHHHHH-
Confidence 899999954 343655554432211 11222222222222222211 10 11346777889999999999999
Q ss_pred ccCCCCCcccc-cCCcceeeecCC-----CHHHHHHHHhcccEEEcCC-------------C-cEEEccC-----ChhhH
Q 012628 390 KDKSGKDWSFI-LRQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISLAGL-----SLAKC 444 (459)
Q Consensus 390 ~~g~~~~~~~~-~~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~g-------------g-Ris~~~~-----~~e~i 444 (459)
++| +.+. .+.+++++|+.+ +.+.+.++++++||.+.+. + ||++... +++++
T Consensus 297 ~~g----~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di 372 (402)
T cd00378 297 ERG----FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEM 372 (402)
T ss_pred hCC----CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHH
Confidence 877 4554 456788888865 3455666777789999531 1 8877543 58999
Q ss_pred HHHHHHHHHHHhh
Q 012628 445 EYLADAIIDSYHN 457 (459)
Q Consensus 445 ~~~~~~l~~~~~~ 457 (459)
+++++.|++++++
T Consensus 373 ~~~~~~l~~~~~~ 385 (402)
T cd00378 373 EEIADFIARALKD 385 (402)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998764
No 142
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=2e-25 Score=222.41 Aligned_cols=337 Identities=12% Similarity=0.052 Sum_probs=213.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-...+.. +|.|.+++.+.++... ...| ......++.+.+++.. + .+++++ ++|
T Consensus 30 G~~~lD~~~g~~~~~lGh~--~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~----~----~~~v~~--~~s 96 (389)
T PRK01278 30 GERYLDFASGIAVNSLGHA--HPHLVEALKEQAEKLWHVSNLY-RIPEQERLAERLVENS----F----ADKVFF--TNS 96 (389)
T ss_pred CCEEEECCccHhhccCCCC--CHHHHHHHHHHHHhcCcccccc-CChHHHHHHHHHHhhC----C----CCEEEE--cCC
Confidence 3568899887543333552 7889999988876421 0112 2223344555555442 1 367988 999
Q ss_pred chhHHHHHHHHHHHh--CCCC----EEEEcCCCCcchHHHhhhCCCCeeeeeee-c-CCCCC----CCHHHHHHHHHcCC
Q 012628 160 GTGSLRLAAALIERY--FPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYY-D-PKTVG----LDFEGMIADIKAAP 227 (459)
Q Consensus 160 gt~a~~l~~~~~~~~--~~gd----~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~-~-~~~~~----~d~e~l~~~i~~~~ 227 (459)
|++|++.+.++...+ .+|| +|++.+++|.++.......+......+.. + ..++. .|++.+++.+++
T Consensus 97 GseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-- 174 (389)
T PRK01278 97 GAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP-- 174 (389)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC--
Confidence 999999997776543 3666 99999999998876665544332221100 0 11111 589999998875
Q ss_pred CCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc
Q 012628 228 GGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG-~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (459)
++++++++.++||+| .+++.+.+++|.++|++||+++|+||+|.+++..+. ...... ....++ +.||||.+
T Consensus 175 -~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~-~~~~pd---i~t~sK~l 246 (389)
T PRK01278 175 -NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK---LFAHEW-AGVTPD---IMAVAKGI 246 (389)
T ss_pred -CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc---ceeecc-cCCCCC---EEEEehhc
Confidence 678888888899999 789999999999999999999999999998865421 111111 111223 24899999
Q ss_pred ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 386 (459)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (459)
+ +|+|+||+++ +++. .+.+.......+.+.+.++|.++...|+.-. .+.+.+++++..++++++.+.+.+
T Consensus 247 ~-~G~~ig~~~~---~~~~----~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~-~~~~~~~~~~~~~~l~~~l~~l~~- 316 (389)
T PRK01278 247 G-GGFPLGACLA---TEEA----AKGMTPGTHGSTYGGNPLAMAVGNAVLDVIL-APGFLDNVQRMGLYLKQKLEGLVD- 316 (389)
T ss_pred c-CCcceEEEEE---cHHH----HhccCCCCCCCCCCccHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHh-
Confidence 9 8999999866 6663 3333333333344566677777655443110 001123344444444444433322
Q ss_pred HhhccCCCCCcccccCCcceeeecCC---CHHHHHHHHhcccEEEcCCC----cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 387 LSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 387 L~~~~g~~~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
+++ .-+..+.+ .|+++|+.+ +.+++++|+++ ||.+.|++ ||+++. .+++++++++++|.++++++
T Consensus 317 ---~~~--~~~~~v~g-~G~~~~i~~~~~~~~~~~~l~~~-GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 317 ---RFP--DVIEEVRG-KGLLLGLKCVVPNRDLVQALRDE-GLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred ---hCC--CceeeEec-ccEEEEEEEecCHHHHHHHHHHC-CeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhC
Confidence 221 01223334 456665533 34567788876 99999976 888643 48999999999999998764
No 143
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=4.7e-25 Score=217.44 Aligned_cols=314 Identities=13% Similarity=0.095 Sum_probs=206.9
Q ss_pred CccCcHHHHHHHHHHhhcCCCCCCCCCcc--cHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCC
Q 012628 99 QPYVLDVVKKAENLMLERGENKEYLPIEG--LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 176 (459)
Q Consensus 99 ~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g--~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~ 176 (459)
.+++++.+.+++.+.... +.| +... .+++++.+++++.... ++.+++ +.||++++.++ +.+.+.+
T Consensus 7 ~~~~~~~v~~a~~~~~~~---~~~-~~~~~~~~~~~~~la~~~g~~~-----~~~~~~--~~~~t~al~~~--~~~~~~~ 73 (356)
T cd06451 7 PSNVPPRVLKAMNRPMLG---HRS-PEFLALMDEILEGLRYVFQTEN-----GLTFLL--SGSGTGAMEAA--LSNLLEP 73 (356)
T ss_pred CcCCCHHHHHHhCCCccC---CCC-HHHHHHHHHHHHHHHHHhcCCC-----CCEEEE--ecCcHHHHHHH--HHHhCCC
Confidence 344588899888654321 223 2222 5678888888875421 345667 88889999988 4444679
Q ss_pred CCEEEEcCCCCcc--hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 012628 177 GAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (459)
Q Consensus 177 gd~Vlv~~p~y~~--~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i 254 (459)
||+|+++.++|.. +...++..|++++.+|.+ .++.+|++++++.+++ .+++++++++|+||||.+++ +++|
T Consensus 74 g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~---~~~i 146 (356)
T cd06451 74 GDKVLVGVNGVFGDRWADMAERYGADVDVVEKP--WGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNP---LEGI 146 (356)
T ss_pred CCEEEEecCCchhHHHHHHHHHhCCCeEEeecC--CCCCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccC---HHHH
Confidence 9999999988765 566788899999999984 3468999999999975 25678888999999999955 6678
Q ss_pred HHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHH---
Q 012628 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS--- 331 (459)
Q Consensus 255 ~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~--- 331 (459)
.++|+++|+++++|++|. ++.... .+ ...+..+++.|.+|.++.| .++||+++ +++..+.+..
T Consensus 147 ~~~a~~~~~~li~D~~~~-~g~~~~-----~~----~~~~~d~~~~s~~K~l~~p-~g~G~l~~---~~~~~~~~~~~~~ 212 (356)
T cd06451 147 GALAKKHDALLIVDAVSS-LGGEPF-----RM----DEWGVDVAYTGSQKALGAP-PGLGPIAF---SERALERIKKKTK 212 (356)
T ss_pred HHHHHhcCCEEEEeeehh-ccCccc-----cc----cccCccEEEecCchhccCC-CCcceeEE---CHHHHHHHHhcCC
Confidence 889999999999999853 432111 11 1112346677999999854 35899976 7775554432
Q ss_pred HHH---------hh-c-cccccCCchHH-HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc
Q 012628 332 QLK---------RL-A-RPMYSNPPVHG-ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF 399 (459)
Q Consensus 332 ~~~---------~~-~-~~~~~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 399 (459)
... .. . ...+.+.+.+. +.++...++ +.. ...+++..++.+++++++.+.|+ ++| ++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~---~l~--~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~ 282 (356)
T cd06451 213 PKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALD---LIL--EEGLENRWARHRRLAKALREGLE-ALG----LKL 282 (356)
T ss_pred CCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHH---HHH--HhhHHHHHHHHHHHHHHHHHHHH-HcC----Cee
Confidence 000 00 0 00122223332 232222221 110 12356778888899999999999 776 344
Q ss_pred ccC---CcceeeecC----CCH-HHHHHHHhcccEEEcCC------C--cEEEccC-ChhhHHHHHHHHHHHHh
Q 012628 400 ILR---QIGMFSFTG----LNK-AQSDNMTNKWHVYMTKD------G--RISLAGL-SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 400 ~~~---~~g~f~~~~----l~~-~~~~~ll~~~gI~v~~g------g--Ris~~~~-~~e~i~~~~~~l~~~~~ 456 (459)
..+ ..+.+.|+. .+. ++++.|.+++||.+++| + |+|++.. ++|++++++++|+++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 283 LAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 322 133444432 233 45666666559999865 2 9998754 78999999999998774
No 144
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=2.3e-25 Score=222.91 Aligned_cols=323 Identities=15% Similarity=0.152 Sum_probs=208.6
Q ss_pred cCCCCCCccCcHHHHHHHHHHhhcCC---CCCCCCCcc----cHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHH
Q 012628 93 YRTEELQPYVLDVVKKAENLMLERGE---NKEYLPIEG----LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (459)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~Y~~~~g----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~ 165 (459)
|+|..+..++|+.+.+++.+.+.... ...|....+ .+++|+.++++++.. +++|++ +.|++++++
T Consensus 20 yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~------~~~v~~--~~~~t~~l~ 91 (397)
T TIGR01976 20 FFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNAD------PPEVVF--GANATSLTF 91 (397)
T ss_pred EecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCC------CCeEEE--eCCHHHHHH
Confidence 34444445568999999988875321 123433323 468899999987543 456888 999999988
Q ss_pred HHHHHHH-HhCCCCEEEEcCCCCcch----HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCC
Q 012628 166 LAAALIE-RYFPGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHN 240 (459)
Q Consensus 166 l~~~~~~-~~~~gd~Vlv~~p~y~~~----~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~N 240 (459)
++...+. .+.+||+|++++|.|... ...++..|++++.++++ ++++.+|++.+++++++ +++++++++|+|
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~i~~---~~~lv~i~~~~n 167 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVD-EATGELHPDDLASLLSP---RTRLVAVTAASN 167 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecc-ccCCCcCHHHHHHhcCC---CceEEEEeCCCC
Confidence 7644432 256999999999988654 34556789999999985 33578999999999975 788999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEe
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVC 320 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~ 320 (459)
|||.+ .++++|+++|++||+++++|+++. .+.... . +...+.++++.|++|.+| +|+||+++
T Consensus 168 ~tG~~---~~~~~i~~~~~~~~~~~ivD~a~~-~~~~~~-----~----~~~~~~d~~~~s~~K~~g---~~~G~l~~-- 229 (397)
T TIGR01976 168 TLGSI---VDLAAITELVHAAGALVVVDAVHY-APHGLI-----D----VQATGADFLTCSAYKFFG---PHMGILWG-- 229 (397)
T ss_pred CCCcc---CCHHHHHHHHHHcCCEEEEehhhh-ccccCC-----C----HHHcCCCEEEEechhhcC---CceEEEEE--
Confidence 99999 568889999999999999999953 222111 1 122334567789999875 46899876
Q ss_pred CChhHHHHHHHHHHhhc------cccccCCchH---HHHHHHHHhCChh------hHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 321 SSSDLAARVKSQLKRLA------RPMYSNPPVH---GARIVANVVGNPA------LFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~~~~~~L~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
+++.++.+........ +...++++.. +...+...+.+.+ ......+.+++.+++..+.++++.+
T Consensus 230 -~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 308 (397)
T TIGR01976 230 -RPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLV 308 (397)
T ss_pred -cHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 7774443322111000 0001112221 2223333332211 0111112357788888899999999
Q ss_pred HHhhccCCCCCcccccC-----Ccceeeec--CCCHH-HHHHHHhcccEEEcCC-----------------C--cEEEcc
Q 012628 386 SLSAKDKSGKDWSFILR-----QIGMFSFT--GLNKA-QSDNMTNKWHVYMTKD-----------------G--RISLAG 438 (459)
Q Consensus 386 ~L~~~~g~~~~~~~~~~-----~~g~f~~~--~l~~~-~~~~ll~~~gI~v~~g-----------------g--Ris~~~ 438 (459)
.|+ +++. +++..+ .++++.+. +.+.+ +.++| +++||.+..| + |||+..
T Consensus 309 ~L~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 383 (397)
T TIGR01976 309 GLS-DLPG---VTLYGVARLAARVPTVSFTVHGLPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAH 383 (397)
T ss_pred HHh-cCCC---EEEeCCCCccCCCceEEEEeCCcCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeec
Confidence 998 7641 455433 44444332 34444 45555 4469998754 2 999866
Q ss_pred C-ChhhHHHHHHHH
Q 012628 439 L-SLAKCEYLADAI 451 (459)
Q Consensus 439 ~-~~e~i~~~~~~l 451 (459)
. +++|+++++++|
T Consensus 384 ~~t~~di~~l~~~l 397 (397)
T TIGR01976 384 YNTAEEVDRLLEAL 397 (397)
T ss_pred cCCHHHHHHHHHhC
Confidence 5 788999998864
No 145
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=6.6e-25 Score=216.59 Aligned_cols=312 Identities=13% Similarity=0.031 Sum_probs=201.3
Q ss_pred CcHHHHHHHHHHhhcCCC-------CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh
Q 012628 102 VLDVVKKAENLMLERGEN-------KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY 174 (459)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~-------~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~ 174 (459)
+.+.+.+++.+....... ..+....-+.++++.++++++. +++++ |+|+++++.++ +...+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--------~~i~~--~~g~t~al~~~--l~~~~ 80 (361)
T cd06452 13 LTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--------DEARV--TPGAREGKFAV--MHSLC 80 (361)
T ss_pred CCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--------ceEEE--eCCHHHHHHHH--HHHhc
Confidence 478888888887632100 0111122357899999998632 57888 99999999988 44446
Q ss_pred CCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC----CCcEEEEeCCCCCCCCCCCCHHH
Q 012628 175 FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP----GGSFILLHGCAHNPTGIDPTPEQ 250 (459)
Q Consensus 175 ~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~----~~~~~ii~~~p~NPTG~~~s~~~ 250 (459)
.+||+|+++.++|......++..|++++.+|++.+.++.+|++.+++++++.. ++++++++++|+||||.. .+
T Consensus 81 ~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~ 157 (361)
T cd06452 81 EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HD 157 (361)
T ss_pred CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---cc
Confidence 79999999999877766678899999999998543456899999999987421 257788889999999988 78
Q ss_pred HHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHH
Q 012628 251 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK 330 (459)
Q Consensus 251 l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~ 330 (459)
+++|+++|+++|+++|+|++|...... . .. ...+.+++++|+||.++ +|.|+||+++ +++.++++.
T Consensus 158 ~~~i~~~~~~~~~~vivD~a~~~g~~~-~-----~~----~~~~~d~~~~s~~K~l~-~~~~~G~l~~---~~~~~~~l~ 223 (361)
T cd06452 158 AKKIAKVCHEYGVPLLLNGAYTVGRMP-V-----SG----KELGADFIVGSGHKSMA-ASAPIGVLAT---TEEWADIVF 223 (361)
T ss_pred HHHHHHHHHHcCCeEEEECCcccCCcC-C-----CH----HHcCCCEEEecCCcccc-CCCCeEEEEE---CHHHHHHHh
Confidence 889999999999999999998642211 1 11 12245789999999998 4569999976 777555443
Q ss_pred HHHHhh--cc-cccc-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCcccc---cC
Q 012628 331 SQLKRL--AR-PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFI---LR 402 (459)
Q Consensus 331 ~~~~~~--~~-~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~---~~ 402 (459)
...... .. .... +.....+..+...+. + +.+.+++..+. .++++++.+.|+ ++ | ++++ ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~---~---~~~~~~~~~~~-~~~~~~l~~~L~-~l~g----~~v~~~~~~ 291 (361)
T cd06452 224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFP---H---VKERVKRWDEE-VEKARWFVAELE-KIEG----IKQLGEKPK 291 (361)
T ss_pred ccccccccceeeeeccccCchHHHHHHHHHH---H---HHHHHHHHHHH-HHHHHHHHHHHh-cCCC----eEEECCCCC
Confidence 221100 00 0000 111111111111111 1 11223333333 334578889998 87 5 4543 22
Q ss_pred Ccceeeec-C-C----------CHHHHHHHHhcccEEEcCCC-----cEEEccCChhhHHHHHHHHHHHH
Q 012628 403 QIGMFSFT-G-L----------NKAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 403 ~~g~f~~~-~-l----------~~~~~~~ll~~~gI~v~~gg-----Ris~~~~~~e~i~~~~~~l~~~~ 455 (459)
...+..+- + + ..++.++|++ +||.+...| |++..+.++|+++.++++|+++.
T Consensus 292 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 292 NHDLMFFETPSFDEIAKKHKRRGYFLYSELKK-RGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CCceEEEEcCCcchhhhhccccchhHHHHHHH-cCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 22222211 1 1 1145667766 599975444 88874458999999999998764
No 146
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=4.3e-25 Score=220.84 Aligned_cols=328 Identities=13% Similarity=0.055 Sum_probs=216.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC--CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+.+.+||..|.+-+..+. -+|.+.+++.+.+++. ....|.+..+ .++.+.+++++... .++++++ ++|
T Consensus 42 g~~~lD~~s~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~~~~-----~~~~v~~--~~s 111 (398)
T PRK03244 42 GKEYLDLLGGIAVNALGH--AHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELLGAP-----EGGRVFF--CNS 111 (398)
T ss_pred CCEEEECCcCHhhccCCC--CCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhCCCC-----CCCEEEE--eCc
Confidence 457899998865333343 2688999998887642 1234643333 46666676664211 2468999 999
Q ss_pred chhHHHHHHHHHHHhCCC-CEEEEcCCCCcchHHHhhh-CC------------CCeeeeeeecCCCCCCCHHHHHHHHHc
Q 012628 160 GTGSLRLAAALIERYFPG-AKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKTVGLDFEGMIADIKA 225 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~g-d~Vlv~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~~~~d~e~l~~~i~~ 225 (459)
|++++..+.++... +| ++|+..+++|..+...... .| .++..+|+ .|++.+++.+.+
T Consensus 112 gsea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~ 182 (398)
T PRK03244 112 GAEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD 182 (398)
T ss_pred hHHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcC
Confidence 99999999776543 44 5788888899877433322 22 12223322 378999988854
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCc
Q 012628 226 APGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (459)
Q Consensus 226 ~~~~~~~ii~~~p~NPTG~~~s~~~-l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 304 (459)
+++++++++++||||.++++++ +++|.++|++||+++|+||+|.+++..+ ..+... .....+++ .+|||
T Consensus 183 ---~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g---~~~~~~-~~~~~pDi---~t~sK 252 (398)
T PRK03244 183 ---DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG---AWFAHQ-HDGVTPDV---VTLAK 252 (398)
T ss_pred ---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc---hHHhhh-hhCCCCCE---EEEch
Confidence 6778888999999999987655 9999999999999999999998876532 111111 11222343 38899
Q ss_pred CcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 305 NLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 384 (459)
Q Consensus 305 ~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (459)
.++ +|+|+||+++ +++.. +.+.......+.+.+.+++.++...|+.- . -+...++++++.+++.
T Consensus 253 ~l~-~G~~ig~~~~---~~~~~----~~~~~~~~~~t~~~~~~~~aaa~a~l~~~------~--~~~~~~~~~~~~~~l~ 316 (398)
T PRK03244 253 GLG-GGLPIGACLA---FGPAA----DLLTPGLHGSTFGGNPVACAAALAVLDTI------A--SEGLLENAERLGEQLR 316 (398)
T ss_pred hhh-CCcccEEEEE---cHHHH----hhccCCCCcCCCCCCHHHHHHHHHHHHHH------H--hccHHHHHHHHHHHHH
Confidence 999 8999999976 77743 33332222223356667777776654311 0 0234567777788899
Q ss_pred HHHhhccCCCCCcccccCCcceeeecCCC----HHHHHHHHhcccEEEcCCC----cEEEcc-CChhhHHHHHHHHHHHH
Q 012628 385 DSLSAKDKSGKDWSFILRQIGMFSFTGLN----KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY 455 (459)
Q Consensus 385 ~~L~~~~g~~~~~~~~~~~~g~f~~~~l~----~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~e~i~~~~~~l~~~~ 455 (459)
+.|+ +++.|. +..+. ..|.++|+.+. .++.+++++ +||.+.+.+ ||+++. .+++++++++++|.+++
T Consensus 317 ~~L~-~~~~~~-~~~v~-g~g~~~~i~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l 392 (398)
T PRK03244 317 AGIE-ALGHPL-VDHVR-GRGLLLGIVLTAPVAKAVEAAARE-AGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAIL 392 (398)
T ss_pred HHHH-hcCCCc-eeeEe-eccEEEEEEEeccHHHHHHHHHHH-CCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 9998 765321 11222 35677776552 234556665 699998754 888665 48999999999999999
Q ss_pred hhc
Q 012628 456 HNV 458 (459)
Q Consensus 456 ~~~ 458 (459)
+++
T Consensus 393 ~~~ 395 (398)
T PRK03244 393 DAA 395 (398)
T ss_pred Hhc
Confidence 865
No 147
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=2.2e-25 Score=221.57 Aligned_cols=321 Identities=15% Similarity=0.082 Sum_probs=211.6
Q ss_pred cCCCCCCccCcHHHHHHHHHHhhcCCCCCCCC-------CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHH
Q 012628 93 YRTEELQPYVLDVVKKAENLMLERGENKEYLP-------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (459)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-------~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~ 165 (459)
|+|..+..++++.|.+++.+.+.....+.+.. ..-++++|+.++++++.. +++|++ |+|+|++++
T Consensus 2 yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~i~~--t~~~t~a~~ 73 (379)
T TIGR03402 2 YLDNNATTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAE------PDEIIF--TSGGTESDN 73 (379)
T ss_pred cCCCcCCCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCcHHHHHH
Confidence 56766776778999999988875321111111 123567888888887543 678999 999999999
Q ss_pred HHHHHHHHh-CCCCEEEEcCCCCcchHHH---hhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC
Q 012628 166 LAAALIERY-FPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP 241 (459)
Q Consensus 166 l~~~~~~~~-~~gd~Vlv~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP 241 (459)
++...+... .+||+|+++...|+.+... ++..|++++.+|.+ .++.+|++++++.+++ +++++++++++||
T Consensus 74 ~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~g~~~~~~l~~~i~~---~~~lv~i~~~~n~ 148 (379)
T TIGR03402 74 TAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVD--EEGRLDLEELRAAITD---DTALVSVMWANNE 148 (379)
T ss_pred HHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccC--CCCcCCHHHHHHhcCC---CcEEEEEEcccCC
Confidence 885433212 4578999988888765443 34579999999983 3567999999999975 7888999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 242 TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 242 TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
||.+++ +++|.++|+++|+++++|+++. ++..+.+ +...+.++++.|.+|.+|++| +|++++
T Consensus 149 tG~~~~---~~~I~~l~~~~g~~vivD~~~~-~g~~~~~---------~~~~~~D~~~~s~~K~~gp~G--~g~l~v--- 210 (379)
T TIGR03402 149 TGTIFP---IEEIGEIAKERGALFHTDAVQA-VGKIPID---------LKEMNIDMLSLSGHKLHGPKG--VGALYI--- 210 (379)
T ss_pred eeeccc---HHHHHHHHHHcCCEEEEECccc-ccccccC---------cccCCCCEEEEcHHHcCCCCc--eEEEEE---
Confidence 999965 5679999999999999999954 4322111 122345678889999888888 788865
Q ss_pred ChhHHHHHHHHH-----HhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCC
Q 012628 322 SSDLAARVKSQL-----KRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGK 395 (459)
Q Consensus 322 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~ 395 (459)
.++.. +.... ....+. +.++..+..++...+ ++. .+.+++..++++++++++.+.|+ + +. +
T Consensus 211 ~~~~~--~~p~~~g~~~~~~~~~--gt~~~~~~~~l~~al---~~~---~~~~~~~~~~~~~l~~~l~~~l~-~~~~--~ 277 (379)
T TIGR03402 211 RKGTR--FRPLLRGGHQERGRRA--GTENVPGIVGLGKAA---ELA---TEHLEEENTRVRALRDRLEAGLL-ARIP--D 277 (379)
T ss_pred CCCCC--CCCcccCCccCCCcCC--CCccHHHHHHHHHHH---HHH---HHhHHHHHHHHHHHHHHHHHHHH-hhCC--C
Confidence 33210 11111 000111 122222222222222 122 22356677888889999999887 5 42 1
Q ss_pred CcccccCC----cc-ee-eecCCCHHHHHHHHhcccEEEcCC-------------------------C--cEEEccC-Ch
Q 012628 396 DWSFILRQ----IG-MF-SFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAGL-SL 441 (459)
Q Consensus 396 ~~~~~~~~----~g-~f-~~~~l~~~~~~~ll~~~gI~v~~g-------------------------g--Ris~~~~-~~ 441 (459)
+.+..+. .+ +. .+.+.+.+.+...++++||.+.+| | |+|++.+ |+
T Consensus 278 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~ 356 (379)
T TIGR03402 278 -ARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTE 356 (379)
T ss_pred -EEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCH
Confidence 3333221 12 22 334566666555666789998753 3 9999876 88
Q ss_pred hhHHHHHHHHHHHHhhc
Q 012628 442 AKCEYLADAIIDSYHNV 458 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~~ 458 (459)
+||++++++|+++++++
T Consensus 357 ~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 357 EDIDYVLEVLPPIIARL 373 (379)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988764
No 148
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.94 E-value=3.8e-25 Score=221.39 Aligned_cols=320 Identities=13% Similarity=0.081 Sum_probs=210.0
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCC-----CcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
.+++++.|.| ++++ |+.+.++..+. .. ...|.+ ..|.+++++++++++...+|.+ .+++++ +.
T Consensus 21 ~~~~l~~g~~----~~~~-p~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~--~~~v~~--~~ 88 (398)
T cd00613 21 SMSFLGSGTY----KHNP-PAVIKRNILEN--EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGMD--VANASL--QD 88 (398)
T ss_pred Cccccccccc----CCcC-cHHHHHHhccc--cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC--ccceec--cC
Confidence 5699999998 6654 66666666665 22 245665 6899999999999988776643 346766 56
Q ss_pred cchhHHHHHHHHHHHhCC--CCEEEEcCCCCcchHHHhhhCC----CCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEE
Q 012628 159 SGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFNDAR----VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~--gd~Vlv~~p~y~~~~~~~~~~G----~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ 232 (459)
+|+.+.+.+. ....+.+ ||+|++++|.|+.+...+...| ++++.+|+. +++.+|++.+++++.+ ++++
T Consensus 89 ~g~~~~~~~~-~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~---~t~~ 162 (398)
T cd00613 89 EATAAAEAAG-LAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVSE---EVAA 162 (398)
T ss_pred chHHHHHHHH-HHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcCC---CeEE
Confidence 4544434332 2223455 9999999999999988888777 899999883 3467899999999875 6888
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC---
Q 012628 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY--- 309 (459)
Q Consensus 233 ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~--- 309 (459)
+++++|+ |||.+. +.+++|+++|++||+++|+|+++.... .... ....+.++++.|+||.+ +|
T Consensus 163 viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~-~~~~---------~~~~~~d~~~~s~~K~~-~p~g~ 228 (398)
T cd00613 163 LMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLT-GLKP---------PGEYGADIVVGNLQKTG-VPHGG 228 (398)
T ss_pred EEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEecccccc-CCCC---------hHHcCCCEEEeeccccC-CCCCC
Confidence 8888885 899992 446999999999999999999854322 1110 11224679999999998 55
Q ss_pred -CCCcceEEEEeCChhHHHHHHHHH--------------------------HhhccccccCCchHHHHHHHHHhCChhhH
Q 012628 310 -AERIGAMNVVCSSSDLAARVKSQL--------------------------KRLARPMYSNPPVHGARIVANVVGNPALF 362 (459)
Q Consensus 310 -G~RiG~~~~v~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 362 (459)
|+|+||+++ +++..+.+.... .......+.+.+...+.++..+....
T Consensus 229 Ggp~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~--- 302 (398)
T cd00613 229 GGPGAGFFAV---KKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLG--- 302 (398)
T ss_pred CCCceeEEEE---hhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhC---
Confidence 799999976 666443321000 00001111122223333332222111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCccee--eecCCC-------HHHHHHHHhcccEEEcC---
Q 012628 363 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTGLN-------KAQSDNMTNKWHVYMTK--- 430 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f--~~~~l~-------~~~~~~ll~~~gI~v~~--- 430 (459)
.+.+++++++++++++++.+.|+ +++. .. .+.+.++ +++.+. .+++++|++ +||.+..
T Consensus 303 ---~~g~~~~~~~~~~~~~~l~~~L~-~~~~----~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~-~gi~~~~~~~ 372 (398)
T cd00613 303 ---PEGLKEIAERAHLNANYLAKRLK-EVGG----VL-PFNGPFFHEFVLRLPPLYGIRAEDLAKALID-GGFHAPTMYL 372 (398)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHH-hcCC----cc-cCCCCeeEEEEEEcCCcchHHHHHHHHhhhh-cCcccccccc
Confidence 23457888999999999999999 8752 22 2223322 233221 234556665 5987754
Q ss_pred -C-C--cEEEccC-ChhhHHHHHHHH
Q 012628 431 -D-G--RISLAGL-SLAKCEYLADAI 451 (459)
Q Consensus 431 -g-g--Ris~~~~-~~e~i~~~~~~l 451 (459)
+ + |+|+... +++||++++++|
T Consensus 373 ~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 373 PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 2 2 9987655 889999998864
No 149
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.94 E-value=1.8e-24 Score=217.90 Aligned_cols=337 Identities=15% Similarity=0.101 Sum_probs=222.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...+|+..|..-..-|.. +|.|.+++.+.+++.. ..+.+..+..+|++++++++.. .++|++ +.||+
T Consensus 47 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~-~~~~~~~~~~~lae~l~~~~~~-------~~~v~~--~~sGs 114 (423)
T TIGR00713 47 GNEYIDYVLSWGPLILGHA--HPRVVEAVKEALERGT-SYGAPTEAEILLAKEIISRVPS-------VEMVRF--VNSGT 114 (423)
T ss_pred CCEEEEccccccccccCCC--CHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCc-------ccEEEE--eCCHH
Confidence 4578999988763333443 7999999999887643 3233677889999999998643 257888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh---CCCCeeeeeeecC-------CCC---CCCHHHHHHHHHcCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND---ARVPWSEYRYYDP-------KTV---GLDFEGMIADIKAAPG 228 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~---~G~~v~~v~~~~~-------~~~---~~d~e~l~~~i~~~~~ 228 (459)
+|++.+.++...+...++|+..+++|.++...+.. .|......|..+. ... ..|++.+++.++..++
T Consensus 115 eA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 194 (423)
T TIGR00713 115 EATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE 194 (423)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC
Confidence 99999988776666779999999999987543322 1111111111000 000 0278999999874333
Q ss_pred CcEEEE-eCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc
Q 012628 229 GSFILL-HGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (459)
Q Consensus 229 ~~~~ii-~~~p~NPTG~~~s-~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (459)
++++++ .+.++| +|.+++ ++.+++|.++|++||+++|+||+|.++..+. .... ......+++ .+|||.+
T Consensus 195 ~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~----~~~~-~~~~~~pDi---~t~sK~l 265 (423)
T TIGR00713 195 EIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL----GGAQ-EYFGVEPDL---TTLGKII 265 (423)
T ss_pred cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc----chhH-HHhCCCcch---hhhhhhh
Confidence 555555 468888 798877 6889999999999999999999998886531 1111 122223343 3799999
Q ss_pred ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhC---ChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012628 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG---NPALFDEWKAEMEMMAGRIKNVRQKL 383 (459)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~---~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (459)
+ +|+|+||+++ +++..+.+... .......+.+.+.+++.++...|+ +.++ ++..++..+.+++.|
T Consensus 266 ~-~G~pig~v~~---~~~i~~~~~~~-~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~-------~~~~~~~~~~~~~~l 333 (423)
T TIGR00713 266 G-GGLPVGAFGG---RREIMERLAPE-GPVYQAGTLSGNPLAMAAGLATLKLLDEEGV-------YTELDELAKRLAEGL 333 (423)
T ss_pred c-CCCceeeeeE---HHHHHHhhCcC-CCeeeccCCCCCHHHHHHHHHHHHHHhcccH-------HHHHHHHHHHHHHHH
Confidence 9 9999999976 77744443211 011122233556666666655443 3222 456666777777777
Q ss_pred HHHHhhccCCCCCccc-ccCCcceee-ecCC------------CH----HHHHHHHhcccEEEcCCC----cEEEccCCh
Q 012628 384 FDSLSAKDKSGKDWSF-ILRQIGMFS-FTGL------------NK----AQSDNMTNKWHVYMTKDG----RISLAGLSL 441 (459)
Q Consensus 384 ~~~L~~~~g~~~~~~~-~~~~~g~f~-~~~l------------~~----~~~~~ll~~~gI~v~~gg----Ris~~~~~~ 441 (459)
.+.++ ++++ .. +...|+++. +++. +. .+...+++ +||.+.+++ ||++.. ++
T Consensus 334 ~~~~~-~~~~----~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~~~l~~~~-t~ 406 (423)
T TIGR00713 334 SEVLE-DTGI----PHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPSQFEACFLSAAH-TE 406 (423)
T ss_pred HHHHH-hcCC----CeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecCCccceeeECCC-CH
Confidence 77777 7663 22 234555553 2321 11 24456666 699987654 888764 99
Q ss_pred hhHHHHHHHHHHHHhhc
Q 012628 442 AKCEYLADAIIDSYHNV 458 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~~ 458 (459)
+++++++++|.++++++
T Consensus 407 ~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 407 EDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999998764
No 150
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=8.9e-25 Score=216.84 Aligned_cols=318 Identities=15% Similarity=0.105 Sum_probs=208.0
Q ss_pred cCCCCCCccCcHHHHHHHHHHhhcCCCC-CCCC-------CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHH
Q 012628 93 YRTEELQPYVLDVVKKAENLMLERGENK-EYLP-------IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (459)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y~~-------~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~ 164 (459)
|+|..+.+++++.+.+++.+.+...... ..++ .....++|+.+++++... +++++++ |+|+++++
T Consensus 2 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~--~~g~t~a~ 74 (373)
T cd06453 2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAP-----SPDEIIF--TRNTTEAI 74 (373)
T ss_pred cccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCC-----CCCeEEE--eCCHHHHH
Confidence 4566677777899999998877431100 0001 234568889999997543 1578988 99999999
Q ss_pred HHHHHHHHHhC---CCCEEEEcCCCCcch----HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCC
Q 012628 165 RLAAALIERYF---PGAKVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (459)
Q Consensus 165 ~l~~~~~~~~~---~gd~Vlv~~p~y~~~----~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~ 237 (459)
+++. .+... +||+|++++++|+.. ....+..|++++.+|++ +++.+|++++++.+.+ +++++++++
T Consensus 75 ~~~~--~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~---~~~~v~~~~ 147 (373)
T cd06453 75 NLVA--YGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTE---RTKLVAVTH 147 (373)
T ss_pred HHHH--HHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcC---CceEEEEeC
Confidence 9984 33344 899999999999764 33455789999999984 4678999999999976 678888999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEE
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (459)
++||||.+.+ +++|+++|++||+++++|++|...... . . ....+.++++.|++|.+++ .++|+++
T Consensus 148 ~~~~tG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~-~-----~----~~~~~~d~~~~s~~K~~~~--~g~g~~~ 212 (373)
T cd06453 148 VSNVLGTINP---VKEIGEIAHEAGVPVLVDGAQSAGHMP-V-----D----VQDLGCDFLAFSGHKMLGP--TGIGVLY 212 (373)
T ss_pred cccccCCcCC---HHHHHHHHHHcCCEEEEEhhhhcCcee-e-----e----ccccCCCEEEeccccccCC--CCcEEEE
Confidence 9999999954 678999999999999999997533211 0 1 1122345777899999985 4589986
Q ss_pred EEeCChhHHHHHHHHHHhhc-----------------cccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012628 318 VVCSSSDLAARVKSQLKRLA-----------------RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 380 (459)
Q Consensus 318 ~v~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 380 (459)
+ +++.++.+........ +....+++..+..+....+.. +. ++.+++++++.++++
T Consensus 213 ~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~--l~---~~g~~~~~~~~~~~~ 284 (373)
T cd06453 213 G---KEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDY--LE---KIGMEAIAAHEHELT 284 (373)
T ss_pred E---chHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHH--HH---HcCHHHHHHHHHHHH
Confidence 6 6664443332110000 000012333332222222210 10 122467778888899
Q ss_pred HHHHHHHhhccCCCCCccccc---CCcceeeec--CCCHHHHHHHHhcccEEEcCC--------------C--cEEEccC
Q 012628 381 QKLFDSLSAKDKSGKDWSFIL---RQIGMFSFT--GLNKAQSDNMTNKWHVYMTKD--------------G--RISLAGL 439 (459)
Q Consensus 381 ~~l~~~L~~~~g~~~~~~~~~---~~~g~f~~~--~l~~~~~~~ll~~~gI~v~~g--------------g--Ris~~~~ 439 (459)
+++.+.|+ +++. +++.. ..++++.+. +.+.+.+.+.++++||.+.+| + |||++..
T Consensus 285 ~~l~~~l~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~ 360 (373)
T cd06453 285 AYALERLS-EIPG---VRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLY 360 (373)
T ss_pred HHHHHHHh-cCCC---eEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCC
Confidence 99999998 7731 44442 234444332 334444444444479988643 2 9998854
Q ss_pred -ChhhHHHHHHHH
Q 012628 440 -SLAKCEYLADAI 451 (459)
Q Consensus 440 -~~e~i~~~~~~l 451 (459)
+++++++++++|
T Consensus 361 ~t~~di~~~~~~l 373 (373)
T cd06453 361 NTEEEIDALVEAL 373 (373)
T ss_pred CCHHHHHHHHhhC
Confidence 889999999874
No 151
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=1e-24 Score=215.91 Aligned_cols=316 Identities=14% Similarity=0.050 Sum_probs=207.2
Q ss_pred cCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEE
Q 012628 101 YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV 180 (459)
Q Consensus 101 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~V 180 (459)
.+++.+.+++.+.. ......|. .-+.++|+.++++++... +++.|++ +.+|+++++.+ +.+.+.+||+|
T Consensus 15 ~~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~~~~----~~~~i~~--~~~gt~~l~~~--~~~l~~~~~~v 83 (368)
T PRK13479 15 TTSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIATGEE----GYTCVPL--QGSGTFSVEAA--IGSLVPRDGKV 83 (368)
T ss_pred CCCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhCCCC----CceEEEE--cCCcHHHHHHH--HHhccCCCCeE
Confidence 34788887776543 11111232 356788999999876431 1245777 89999999998 45556799999
Q ss_pred EEcCCCCcch--HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 012628 181 LISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 258 (459)
Q Consensus 181 lv~~p~y~~~--~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~ 258 (459)
+++.++|.+. ...++..|++++.+|.. .++.+|++++++++++. ++++++.+++|+||||...+ +++|+++|
T Consensus 84 lv~~~~~~~~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~---~~~i~~l~ 157 (368)
T PRK13479 84 LVPDNGAYGARIAQIAEYLGIAHVVLDTG--EDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILNP---LDEIAAVA 157 (368)
T ss_pred EEEeCCchHHHHHHHHHHcCCcEEEEECC--CCCCCCHHHHHHHHHhC-CCCcEEEEEcccCccccccC---HHHHHHHH
Confidence 9999887665 46778899999999984 45679999999998753 24567778999999999954 67899999
Q ss_pred HhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC-cccCCCCcceEEEEeCChhHHHHHHHHHHh--
Q 012628 259 QEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN-LGLYAERIGAMNVVCSSSDLAARVKSQLKR-- 335 (459)
Q Consensus 259 ~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~-- 335 (459)
+++|+++|+|+ |+.++..+. . +...+..+++.|++|. +|++| +||+++ +++.++.+......
T Consensus 158 ~~~~~~livDa-~~~~g~~~~-----~----~~~~~~d~~v~s~~K~l~g~~G--~G~l~~---~~~~~~~~~~~~~~~~ 222 (368)
T PRK13479 158 KRHGKRLIVDA-MSSFGAIPI-----D----IAELGIDALISSANKCIEGVPG--FGFVIA---RRSELEACKGNSRSLS 222 (368)
T ss_pred HHcCCEEEEEc-ccccCCccc-----c----ccccCceEEEecCccccccCCC--ceEEEE---CHHHHHHhhcCCCCee
Confidence 99999999995 466653211 1 1122334677899996 47788 699977 77755544321100
Q ss_pred ------h-----ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCC-
Q 012628 336 ------L-----ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ- 403 (459)
Q Consensus 336 ------~-----~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~- 403 (459)
. ......+++..++.++...+.. +.+ ...+++..++++++++++.+.|+ ++| ++...+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~--l~~--~~~~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~ 293 (368)
T PRK13479 223 LDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLE--LEE--EGGVPARGARYANNQRTLVAGMR-ALG----FEPLLDAE 293 (368)
T ss_pred ecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHH--HHH--hhCHHHHHHHHHHHHHHHHHHHH-HcC----CcccCCch
Confidence 0 0010013333332332222211 000 01246677899999999999999 887 3433221
Q ss_pred ----cceeeec-C---CCH-HHHHHHHhcccEEEcCCC-------cEEE-ccCChhhHHHHHHHHHHHHhhc
Q 012628 404 ----IGMFSFT-G---LNK-AQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 404 ----~g~f~~~-~---l~~-~~~~~ll~~~gI~v~~gg-------Ris~-~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+...++. . .+. ++.+.|.+ +||.+.+|. ||+. +..++++++.++++|+++++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 294 IQSPIIVTFHAPADPAYDFKEFYERLKE-QGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred hcCceEEEEECCCCCCcCHHHHHHHHHH-CCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 1122332 2 233 44556555 599998862 9985 5558999999999999998764
No 152
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.94 E-value=9.4e-25 Score=219.66 Aligned_cols=338 Identities=12% Similarity=0.024 Sum_probs=212.7
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCC----cccHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI----EGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~----~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
+...|||..|......+. .+|.|.+++.+.+... ..|... .-..++.+.+++++ +. ..+++++ +
T Consensus 35 G~~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~----~~--~~~~v~~--~ 102 (413)
T cd00610 35 GNRYLDFLSGIGVLNLGH--NHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALT----PE--GLDKVFF--V 102 (413)
T ss_pred CCEEEEcCccHHhhccCC--CCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhC----CC--CCCEEEE--c
Confidence 357899988754233343 2788999998888542 334332 23345555555553 22 2678999 9
Q ss_pred ccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhC-------------CCCeeeeeeecC----CCCCCCHHHHH
Q 012628 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-------------RVPWSEYRYYDP----KTVGLDFEGMI 220 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-------------G~~v~~v~~~~~----~~~~~d~e~l~ 220 (459)
+||++++..+.+++..+.++++|++.+++|..+....... +.+++.+|.++. ..+..|++.++
T Consensus 103 ~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 182 (413)
T cd00610 103 NSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALE 182 (413)
T ss_pred CcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHH
Confidence 9999999999776655678999999999998764433322 224566665311 12445899999
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012628 221 ADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (459)
Q Consensus 221 ~~i~~~~~~~~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (459)
+.+++.+.+.+++++...+|++|.++ +++.+++|.++|++||+++|+||+|.+++..+ ..... ......++ +
T Consensus 183 ~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g---~~~~~-~~~~~~~d---~ 255 (413)
T cd00610 183 EALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTG---KMFAF-EHFGVEPD---I 255 (413)
T ss_pred HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhhH-hhcCCCCC---e
Confidence 99876444566777777778889876 77779999999999999999999999875322 11111 11122223 3
Q ss_pred EcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012628 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 379 (459)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 379 (459)
.||||.++. |+|+||+++ +++.++.+. ........+.+.+.+++.++...|+. . .+ +...++++++
T Consensus 256 ~t~sK~l~~-g~~~g~~~~---~~~~~~~~~--~~~~~~~~t~~~~~~~~~a~~a~l~~---l---~~--~~~~~~~~~~ 321 (413)
T cd00610 256 VTLGKGLGG-GLPLGAVLG---REEIMDAFP--AGPGLHGGTFGGNPLACAAALAVLEV---L---EE--EGLLENAAEL 321 (413)
T ss_pred EEEcccccC-ccccEEEEE---cHHHHHhhc--cCCCCCCCCCCcCHHHHHHHHHHHHH---H---Hh--ccHHHHHHHH
Confidence 489999995 899999866 777444430 12222222234455555555444321 0 11 2445667777
Q ss_pred HHHHHHHHhhccCCC-CCcccccCCcceeeecCC------------C-HHHHHHHHhcccEEEcCCC----cEEEccC-C
Q 012628 380 RQKLFDSLSAKDKSG-KDWSFILRQIGMFSFTGL------------N-KAQSDNMTNKWHVYMTKDG----RISLAGL-S 440 (459)
Q Consensus 380 ~~~l~~~L~~~~g~~-~~~~~~~~~~g~f~~~~l------------~-~~~~~~ll~~~gI~v~~gg----Ris~~~~-~ 440 (459)
.+++.+.|+ ++... +......+. |.++|+.+ . .++.+.|++ +||.+.|++ |++++.. +
T Consensus 322 ~~~l~~~l~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gv~v~~~~~~~lR~~~~~~~t 398 (413)
T cd00610 322 GEYLRERLR-ELAEKHPLVGDVRGR-GLMIGIELVKDRATKPPDKELAAKIIKAALE-RGLLLRPSGGNVIRLLPPLIIT 398 (413)
T ss_pred HHHHHHHHH-HHHhhCCcEEEeecC-ceEEEEEEecCCCcCCcchHHHHHHHHHHHH-CCeEEeecCCCEEEEECCCcCC
Confidence 777777776 54210 001112334 44444322 1 233555555 599999973 8876654 8
Q ss_pred hhhHHHHHHHHHHHH
Q 012628 441 LAKCEYLADAIIDSY 455 (459)
Q Consensus 441 ~e~i~~~~~~l~~~~ 455 (459)
++++++++++|.+++
T Consensus 399 ~~~i~~~~~~l~~~l 413 (413)
T cd00610 399 EEEIDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHHHHHHhC
Confidence 899999999998764
No 153
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=4.2e-24 Score=210.51 Aligned_cols=310 Identities=17% Similarity=0.115 Sum_probs=205.8
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEE
Q 012628 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 181 (459)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vl 181 (459)
+++.+.+++...... ....|. .-..++|+.++++++... +...|++ +.||++++..+ +...+.+||+|+
T Consensus 10 ~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~~~~~----~~~~i~~--~~~gt~~l~~~--~~~~~~~~~~vi 78 (355)
T TIGR03301 10 TSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALAGGDD----NHTCVLL--QGSGTFAVEAT--IGSLVPRDGKLL 78 (355)
T ss_pred CCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHhcCCC----CCcEEEE--eCCcHHHHHHH--HHhccCCCCeEE
Confidence 578888888773311 112342 446788999999875541 1235667 89999999998 444466788877
Q ss_pred EcCCCCcc--hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 012628 182 ISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (459)
Q Consensus 182 v~~p~y~~--~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~ 259 (459)
+.++.+.+ +...++..|.+++.++. ++++.+|++++++.+++. ++.+++++++++||||.. .++++|+++|+
T Consensus 79 ~~~~~~~~~~~~~~a~~~g~~~~~i~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~---~~~~~i~~l~~ 152 (355)
T TIGR03301 79 VLINGAYGERLAKICEYLGIPHTDLNF--SEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGIL---NPLEAIAKVAR 152 (355)
T ss_pred EECCCchhhHHHHHHHHcCCceEEEec--CCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccch---hHHHHHHHHHH
Confidence 77665443 45677889999999998 345789999999999763 355677778899999999 55889999999
Q ss_pred hcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc-ccCCCCcceEEEEeCChhHHHHHHHH------
Q 012628 260 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQ------ 332 (459)
Q Consensus 260 ~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~------ 332 (459)
+||+++|+|++ +.++..+ .. +...+.++++.|++|.+ |++| +||+++ +++.++.+...
T Consensus 153 ~~~~~livD~~-~s~g~~~-----~~----~~~~~~d~~~~s~~K~l~~~~G--~g~~~~---~~~~~~~~~~~~~~~~~ 217 (355)
T TIGR03301 153 SHGAVLIVDAM-SSFGAIP-----ID----IEELDVDALIASANKCLEGVPG--FGFVIA---RRDLLEASAGNARSLYL 217 (355)
T ss_pred HcCCEEEEEec-cccCCcc-----cc----hhhcCccEEEecCCcccccCCc--eeEEEE---CHHHHHHhhCCCCCcee
Confidence 99999999986 4444211 11 12234568899999986 6666 799977 77765554310
Q ss_pred --------HHhhccccccCCchHHHHHHHHHhCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC-
Q 012628 333 --------LKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAE-MEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR- 402 (459)
Q Consensus 333 --------~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~- 402 (459)
+.+. .....+++..++.++...|.. +. .+. +++..++++++++++.+.|+ ++| +++..+
T Consensus 218 ~~~~~~~~~~~~-~~~~~t~~~~~~~a~~~al~~--~~---~~g~~~~~~~~~~~~~~~~~~~L~-~~g----~~~~~~~ 286 (355)
T TIGR03301 218 DLYDQWAYMEKT-GKWRFTPPTHTVYAFAQALEE--LE---AEGGVPARIARYRRNRELLVDGLR-ALG----FQPLLPE 286 (355)
T ss_pred eHHHHHHHhhhc-CCCCCCCcHHHHHHHHHHHHH--HH---HcccHHHHHHHHHHHHHHHHHHHH-HcC----CeeecCC
Confidence 0000 011113454444444333321 10 111 46777888999999999999 877 444332
Q ss_pred --CcceeeecCC------CH-HHHHHHHhcccEEEcCCC-------cEEEc-cCChhhHHHHHHHHHHHH
Q 012628 403 --QIGMFSFTGL------NK-AQSDNMTNKWHVYMTKDG-------RISLA-GLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 403 --~~g~f~~~~l------~~-~~~~~ll~~~gI~v~~gg-------Ris~~-~~~~e~i~~~~~~l~~~~ 455 (459)
.+++++|+.+ +. ++.++|. ++||.+.+++ ||++. ..++++++.++++|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 287 RWQSPIIVSFLYPDDPDFDFDDFYQELK-ERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CCCCCcEEEEECCCCCcchHHHHHHHHH-HCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 2344555432 22 3344554 4699998873 99874 448899999999998753
No 154
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.94 E-value=3.9e-24 Score=213.45 Aligned_cols=323 Identities=13% Similarity=0.037 Sum_probs=214.7
Q ss_pred CCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCC
Q 012628 98 LQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (459)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~g 177 (459)
++..+++.|.+++.+... .| ...+..++++.+.+.+....+.. ..+.+++ +++||++++.+ +...+.+|
T Consensus 16 GP~~~~~~V~~a~~~~~~-----~~-~~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~--~~~gt~a~~~a--~~~~~~~G 84 (401)
T PLN02409 16 GPVNIPERVLRAMNRPNE-----DH-RSPAFPALTKELLEDVKYIFKTK-SGTPFIF--PTTGTGAWESA--LTNTLSPG 84 (401)
T ss_pred CCCCCCHHHHHHhcCCCC-----CC-CCHHHHHHHHHHHHHHHHHhCCC-CCCEEEE--eCCcHHHHHHH--HHhcCCCC
Confidence 445568999988866431 12 13345566666665554444432 1235666 78899999887 44457799
Q ss_pred CEEEEcCCCCcch--HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 012628 178 AKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKI 254 (459)
Q Consensus 178 d~Vlv~~p~y~~~--~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~ii~~~p~NPTG~~~s~~~l~~i 254 (459)
|+|+++++.|+.+ ...++..|++++.++.+ .+..+|++.+++++++.+ ++++++++++++||||.+++.+++.++
T Consensus 85 d~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l 162 (401)
T PLN02409 85 DKVVSFRIGQFSLLWIDQMQRLNFDVDVVESP--WGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKL 162 (401)
T ss_pred CEEEEeCCCchhHHHHHHHHHcCCceEEEECC--CCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHH
Confidence 9999999988655 46778889999999984 344689999999998521 267888889999999999876666555
Q ss_pred HHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHH-
Q 012628 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL- 333 (459)
Q Consensus 255 ~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~- 333 (459)
++ |+++|+++|+|+++. ++..+.+ ++..+.++++.|.+|.++.| .++||+++ +++.++++....
T Consensus 163 ~~-~~~~g~~~vvD~v~s-~g~~~id---------~~~~~~D~~~~s~~K~l~~P-~G~G~l~~---~~~~~~~~~~~~~ 227 (401)
T PLN02409 163 LD-CAQHPALLLVDGVSS-IGALDFR---------MDEWGVDVALTGSQKALSLP-TGLGIVCA---SPKALEASKTAKS 227 (401)
T ss_pred Hh-hhccCcEEEEEcccc-cCCcccc---------ccccCccEEEEcCccccCcC-CCcceeEE---CHHHHHHHhcCCC
Confidence 55 999999999999954 4422111 12234567888889998643 25999977 777655543210
Q ss_pred -----------Hhhccc-c-ccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc
Q 012628 334 -----------KRLARP-M-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI 400 (459)
Q Consensus 334 -----------~~~~~~-~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 400 (459)
...... . ..+++...+.++...++ +.. ...+++++++++++++++.+.|+ ++| +++.
T Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~---~~~--~~G~e~i~~~~~~l~~~l~~~L~-~~g----~~~~ 297 (401)
T PLN02409 228 PRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALD---LIF--EEGLENVIARHARLGEATRLAVE-AWG----LKLC 297 (401)
T ss_pred CCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHH---HHH--HhhHHHHHHHHHHHHHHHHHHHH-HcC----Ceec
Confidence 000000 1 11344434444433332 111 23468889999999999999999 887 3444
Q ss_pred cCC----cceeeec----CCCH-HHHHHHHhcccEEEcCC-----C---cEEEccC-ChhhHHHHHHHHHHHHhhc
Q 012628 401 LRQ----IGMFSFT----GLNK-AQSDNMTNKWHVYMTKD-----G---RISLAGL-SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 401 ~~~----~g~f~~~----~l~~-~~~~~ll~~~gI~v~~g-----g---Ris~~~~-~~e~i~~~~~~l~~~~~~~ 458 (459)
.+. .+...++ +++. ++...+++++||.+..| | ||+..+. +.+++..++++|.+++.++
T Consensus 298 ~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 298 TKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred cCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 332 1122222 3454 44568888899999876 2 9987665 8899999999999988764
No 155
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=4.5e-24 Score=212.49 Aligned_cols=222 Identities=15% Similarity=0.129 Sum_probs=161.7
Q ss_pred CCC--CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh----
Q 012628 121 EYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---- 194 (459)
Q Consensus 121 ~Y~--~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~---- 194 (459)
.|+ +..-..+|++.+|++... +.+++ ++||++++.++ +.+.+.+||+|+++.|.|..+...+
T Consensus 69 ~Y~r~~~Pt~~~LE~~lA~l~g~--------~~~l~--~~sG~~Ai~~a--l~al~~~GD~Vl~~~~~Y~~~~~~~~~~~ 136 (418)
T PLN02242 69 IYSRHFNPTVLNLGRQMAALEGT--------EAAYC--TASGMSAISSV--LLQLCSSGGHVVASNTLYGGTHALLAHFL 136 (418)
T ss_pred cccCCCChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHhh
Confidence 454 456678999999998643 34566 89999999998 5555789999999999998887665
Q ss_pred -hhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC
Q 012628 195 -NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (459)
Q Consensus 195 -~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~ 273 (459)
+..|++++.++. .|++.+++++++ .+++++++++|+||||.+ .++++|+++|++||+++|+|++|..
T Consensus 137 ~~~~G~~~~~~d~-------~d~e~l~~~i~~--~~tklV~lesp~NPtG~v---~dl~~I~~la~~~gi~livDea~~~ 204 (418)
T PLN02242 137 PRKCNITTTFVDI-------TDLEAVKKAVVP--GKTKVLYFESISNPTLTV---ADIPELARIAHEKGVTVVVDNTFAP 204 (418)
T ss_pred hhccCceEEEcCC-------CCHHHHHHhcCc--CCCEEEEEecCCCCCCcc---cCHHHHHHHHHHhCCEEEEECCCCc
Confidence 346777666654 288999998865 248889999999999999 5788999999999999999999976
Q ss_pred CCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCc-ceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHH
Q 012628 274 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV 352 (459)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (459)
+.+. .. ..+.++++.||||.++.+|+|+ ||+++ +++.++.+...... .....+++...|.++
T Consensus 205 ~~~~-------~~-----~~g~divv~S~SK~l~g~g~~~gG~iv~---~~~li~~l~~~~~~--~~~~~g~~~~~~~A~ 267 (418)
T PLN02242 205 MVLS-------PA-----RLGADVVVHSISKFISGGADIIAGAVCG---PAELVNSMMDLHHG--ALMLLGPTMNPKVAF 267 (418)
T ss_pred cCCC-------HH-----HcCCcEEEEeCccccCCCCCceEEEEEc---CHHHHHHHHHHhhh--hhhccCCCCCHHHHH
Confidence 6542 11 1135789999999999999985 77654 77755554432110 011224444455565
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 353 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
..+++... +....++++++++++.+.|+ +++
T Consensus 268 l~~~~l~t--------l~~r~~~~~~~a~~la~~L~-~~~ 298 (418)
T PLN02242 268 ELSERLPH--------LSLRMKEHCRRAMEYAKRMK-ELG 298 (418)
T ss_pred HHHcCCCc--------HHHHHHHHHHHHHHHHHHHH-hCC
Confidence 55544322 34566788999999999999 775
No 156
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.93 E-value=7e-24 Score=210.86 Aligned_cols=329 Identities=14% Similarity=0.062 Sum_probs=211.5
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-------CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-------NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+..|||..=. ...++++.+.+++.+...... ...+.......++|+.+|++++. +++++
T Consensus 18 ~~~~~~~~~~-----~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~--------~~~~~- 83 (387)
T PRK09331 18 EEFINLDPIQ-----RGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM--------DEARV- 83 (387)
T ss_pred ccccccChhh-----cCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC--------CcEEE-
Confidence 3566665322 122348889999988773211 11122233578999999999743 35677
Q ss_pred ecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC----CCCcE
Q 012628 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA----PGGSF 231 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~----~~~~~ 231 (459)
++|+++++.++ +...+.+||+|+++.++|......++..|++++.+|...++++.+|++.+++++++. .++++
T Consensus 84 -~~g~t~a~~~a--l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 160 (387)
T PRK09331 84 -THGAREGKFAV--MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPA 160 (387)
T ss_pred -eCCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCE
Confidence 89999999988 444578999999999998777667888999999999842346789999999999752 13678
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCC
Q 012628 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 311 (459)
Q Consensus 232 ~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 311 (459)
++++++|+||||.. .++++|+++|++||+++++|++|..-... . +. ...+.++++.|++|.++ .+.
T Consensus 161 lV~l~~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~g~~~-~--~~-------~~~g~D~~~~s~~K~l~-~~~ 226 (387)
T PRK09331 161 LALLTHVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTVGRMP-V--DG-------KKLGADFIVGSGHKSMA-ASA 226 (387)
T ss_pred EEEEECCCCCCccc---ccHHHHHHHHHHcCCEEEEECCcccCCcC-C--CH-------HHcCCCEEEeeCccccc-CCC
Confidence 88899999999988 78999999999999999999996632211 1 11 12235688999999998 456
Q ss_pred CcceEEEEeCChhHHHHHHHHHHhhc--c-cccc-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 312 RIGAMNVVCSSSDLAARVKSQLKRLA--R-PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 387 (459)
Q Consensus 312 RiG~~~~v~~~~~~~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 387 (459)
|+||+++ +++.++.+........ . ..+. +.+.....++...+ + .+.+.++ ..++..++.+++.+.|
T Consensus 227 ~~G~l~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal---~---~~~~~~~-~~~~~~~~~~~l~~~L 296 (387)
T PRK09331 227 PSGVLAT---TEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASF---P---HVVERVK-RWDEEVKKARWFVDEL 296 (387)
T ss_pred CEEEEEE---CHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHH---H---HHHHHHH-HHHHHHHHHHHHHHHH
Confidence 8999876 7775544433211000 0 0011 11111111111111 1 1122232 3344566777889999
Q ss_pred hhcc-CCCCCccccc---CCcceeee--cCC---------C-HHHHHHHHhcccEEEcCCC-----cEEEccCChhhHHH
Q 012628 388 SAKD-KSGKDWSFIL---RQIGMFSF--TGL---------N-KAQSDNMTNKWHVYMTKDG-----RISLAGLSLAKCEY 446 (459)
Q Consensus 388 ~~~~-g~~~~~~~~~---~~~g~f~~--~~l---------~-~~~~~~ll~~~gI~v~~gg-----Ris~~~~~~e~i~~ 446 (459)
+ ++ | +++.. ...++..+ .++ + .++.+.|. ++||...+.| |+...+.+++++++
T Consensus 297 ~-~l~g----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~gI~~~~~~~~~i~ri~~~g~t~~di~~ 370 (387)
T PRK09331 297 E-KIEG----FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELK-KRGIHGIKPGATKEFKLSTYGLTWEQVEY 370 (387)
T ss_pred h-cCCC----EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHH-HcCceEEccCCceEEEEEeccCCHHHHHH
Confidence 8 88 5 45442 22222211 111 1 23455665 4699854443 66654458999999
Q ss_pred HHHHHHHHHhhc
Q 012628 447 LADAIIDSYHNV 458 (459)
Q Consensus 447 ~~~~l~~~~~~~ 458 (459)
++++|+++++++
T Consensus 371 l~~aL~~i~~~~ 382 (387)
T PRK09331 371 VADAFKEIAEKY 382 (387)
T ss_pred HHHHHHHHHHhc
Confidence 999999988764
No 157
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=9.3e-24 Score=208.66 Aligned_cols=316 Identities=14% Similarity=0.030 Sum_probs=205.1
Q ss_pred CCccCcHHHHHHHHHHhhcCCCCCCCC--CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC
Q 012628 98 LQPYVLDVVKKAENLMLERGENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 175 (459)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~ 175 (459)
++..+++.|.+++.... ..+.+ ..-++++|+.++++++... .++.|++ |.|||++++.+ +.+.+.
T Consensus 10 gp~~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~r~~la~l~~~~~----~~~~i~~--t~~~t~al~~~--~~~l~~ 76 (363)
T TIGR02326 10 GPLTTSRTVKEAMLFDW-----CTWDSDYNIVVEQIRQQLLALATAEE----GYTSVLL--QGSGTFAVEAV--IGSAVP 76 (363)
T ss_pred CCCCCCHHHHHHhCCCC-----CCCChHHHHHHHHHHHHHHHHhCCCC----CceEEEE--cCCCHHHHHHH--HHhcCC
Confidence 33445677777665432 11221 1234677888998876531 0236888 99999999998 444467
Q ss_pred CCCEEEEcCCCCcch--HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 012628 176 PGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (459)
Q Consensus 176 ~gd~Vlv~~p~y~~~--~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~ 253 (459)
+||.|++..+++.+. ...++..|++++.+|+ +.++.+|++.++++++..+ +.+++.+++++||||+.+ ++++
T Consensus 77 ~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~---~i~~ 150 (363)
T TIGR02326 77 KDGKLLVVINGAYGARIVQIAEYLGIPHHVVDT--GEVEPPDVVEVEAILAADP-AITHIALVHCETTTGILN---PIEA 150 (363)
T ss_pred CCCeEEEEeCChhhHHHHHHHHHcCCceEEEeC--CCCCCCCHHHHHHHHhhCC-CccEEEEEeecCCccccC---cHHH
Confidence 888888877766544 4667889999999998 4467899999999998632 445677788999999995 4678
Q ss_pred HHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc-ccCCCCcceEEEEeCChhHHHHHHHH
Q 012628 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQ 332 (459)
Q Consensus 254 i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~ 332 (459)
|+++|++||+++++|++ +.++..+. . +...+..+++.|++|.+ |++| +||+++ +++.++.+...
T Consensus 151 I~~l~~~~g~~livD~~-~~~g~~~~-----~----~~~~~~D~~~~s~~K~l~~p~G--~G~l~~---~~~~~~~~~~~ 215 (363)
T TIGR02326 151 VAKLAHRHGKVTIVDAM-SSFGGIPI-----D----IAELHIDYLISSANKCIQGVPG--FGFVIA---RQAELAACKGN 215 (363)
T ss_pred HHHHHHHcCCEEEEEcc-ccccCccc-----c----hhhcCccEEEecCccccccCCc--ceEEEE---CHHHHHHhhcC
Confidence 99999999999999987 55543211 1 12234568889999976 6667 799976 66655443210
Q ss_pred --------------HHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 012628 333 --------------LKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 398 (459)
Q Consensus 333 --------------~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 398 (459)
...........++...+.+....+.. +.. ...+++.+++++++++++++.|+ ++|+ .
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~--l~~--~g~~~~~~~~~~~~~~~l~~~L~-~~g~----~ 286 (363)
T TIGR02326 216 ARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLE--LEK--EGGVAARHQRYQQNQKTLVAGMR-ALGF----E 286 (363)
T ss_pred CCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHH--HHH--hhCHHHHHHHHHHHHHHHHHHHH-HcCC----e
Confidence 00000001113444444443333321 100 01246678999999999999998 8873 4
Q ss_pred cccC---Cccee---eecC---CCHHHHHHHHhcccEEEcCCC-------cEEE-ccCChhhHHHHHHHHHHHHh
Q 012628 399 FILR---QIGMF---SFTG---LNKAQSDNMTNKWHVYMTKDG-------RISL-AGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 399 ~~~~---~~g~f---~~~~---l~~~~~~~ll~~~gI~v~~gg-------Ris~-~~~~~e~i~~~~~~l~~~~~ 456 (459)
...+ ..+.. .+.. ++...+...++++||.+.+|. ||++ +..+.++++.++++|++++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 287 PLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred eccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 4322 23332 2222 233344444455699998883 9985 44589999999999998875
No 158
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.93 E-value=5.2e-24 Score=213.03 Aligned_cols=329 Identities=15% Similarity=0.092 Sum_probs=212.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC-CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+||..|.--+..|. -+|.|.+++.+.+++... .......-..++.+.++++. + .+.+.+ +++|
T Consensus 39 G~~~iD~~~~~~~~~lGh--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~sG 106 (403)
T PRK05093 39 GKEYIDFAGGIAVTALGH--CHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT----F----AERVFF--ANSG 106 (403)
T ss_pred CCEEEEcCcCHHhccCCC--CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC----C----CCEEEE--eCch
Confidence 356899987743233354 378899999888754210 11111112235555555542 1 257888 9999
Q ss_pred hhHHHHHHHHHHHhC------CCCEEEEcCCCCcchHH-HhhhCC------------CCeeeeeeecCCCCCCCHHHHHH
Q 012628 161 TGSLRLAAALIERYF------PGAKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKTVGLDFEGMIA 221 (459)
Q Consensus 161 t~a~~l~~~~~~~~~------~gd~Vlv~~p~y~~~~~-~~~~~G------------~~v~~v~~~~~~~~~~d~e~l~~ 221 (459)
++|+..+.++..... ..++|+..+-+|.+... .+...| .+++.+|. .|++.+++
T Consensus 107 seA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 179 (403)
T PRK05093 107 AEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKA 179 (403)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHH
Confidence 999999988765542 23678888888776532 222111 12222222 27899998
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012628 222 DIKAAPGGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (459)
Q Consensus 222 ~i~~~~~~~~~ii~~~p~NPTG~~~--s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (459)
.+.+ ++++++++ |.||+|.++ +.+.+++|.++|++||+++|+||+|.++++.+. .++... .+..++ +
T Consensus 180 ~l~~---~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~---~~~~~~-~~~~pd---i 248 (403)
T PRK05093 180 VIDD---HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD---LFAYMH-YGVTPD---I 248 (403)
T ss_pred HhcC---CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc---chhhhh-cCCCCC---E
Confidence 8864 66677765 888887765 899999999999999999999999998876531 222111 122223 4
Q ss_pred EcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012628 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 379 (459)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 379 (459)
.||||.++ +|+|+||+++ +++ +.+.+.......+.+.+.+.|.++...|+.. . -.+..++++++
T Consensus 249 ~s~sK~l~-~G~rig~vv~---~~~----i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~------~--~~~~~~~~~~~ 312 (403)
T PRK05093 249 LTSAKALG-GGFPIGAMLT---TAE----IASHFKVGTHGSTYGGNPLACAVAEAVFDII------N--TPEVLEGVKAR 312 (403)
T ss_pred EEeccccc-CCcceEEEEE---cHH----HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH------h--hccHHHHHHHH
Confidence 58999999 8999999976 777 4444433222333356666777776644211 0 12445788889
Q ss_pred HHHHHHHHhhccCCCCCcccccCCcceeeecCC-------CHHHHHHHHhcccEEEcCCC----cEEEccC-ChhhHHHH
Q 012628 380 RQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------NKAQSDNMTNKWHVYMTKDG----RISLAGL-SLAKCEYL 447 (459)
Q Consensus 380 ~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l-------~~~~~~~ll~~~gI~v~~gg----Ris~~~~-~~e~i~~~ 447 (459)
++++.+.|+ +++....+....+.+|+++|+.+ +.++++.++++ ||.+.++| ||+++.. ++++++++
T Consensus 313 ~~~l~~~L~-~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~-Gv~v~~~g~~~lRl~~~~~~~~~~i~~~ 390 (403)
T PRK05093 313 RQRFVDGLQ-KINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEE-GVMVLVAGPDVLRFAPSLVIEEADIDEG 390 (403)
T ss_pred HHHHHHHHH-HHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHC-CeEEecCCCCEEEEeCCCCCCHHHHHHH
Confidence 999999998 76311111122345577777643 23557777774 99999865 8865544 89999999
Q ss_pred HHHHHHHHhhc
Q 012628 448 ADAIIDSYHNV 458 (459)
Q Consensus 448 ~~~l~~~~~~~ 458 (459)
+++|.+++.++
T Consensus 391 ~~~l~~~l~~~ 401 (403)
T PRK05093 391 LARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 159
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.93 E-value=1.9e-23 Score=209.51 Aligned_cols=327 Identities=15% Similarity=0.100 Sum_probs=210.3
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC------CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN------KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
.+.++|+...|+ +... +|.+.+++.+.++.... ..|.+.....+|++.+|+++. . ++.+++
T Consensus 46 ~~~~~~~s~dyl---gl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-~------~~~~~~-- 112 (407)
T PRK09064 46 REVTVWCSNDYL---GMGQ-HPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-K------EAALVF-- 112 (407)
T ss_pred ceEEEEECCCCc---CCCC-CHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-C------CcEEEE--
Confidence 468899988774 5544 78899999887754210 123345567889999999863 2 455555
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC-CCcEEEEe
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLH 235 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~ii~ 235 (459)
++|++++..+..++....+++.|+.....+......++..|+++..++. .|++.+++.++... ++++++++
T Consensus 113 -~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~ 184 (407)
T PRK09064 113 -TSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAF 184 (407)
T ss_pred -CcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 5566776666444322347776666665665555566667777655543 37788888776432 36788999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEEcCCcCcccCCCCcc
Q 012628 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 314 (459)
Q Consensus 236 ~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG 314 (459)
++++||+|.+ .++++|.++|++||+++|+||+|....+++. .. .+....+. ...+++++||||.||++| |
T Consensus 185 ~~v~s~~G~~---~~l~~i~~l~~~~~~~livDEa~~~G~~g~~-g~--g~~~~~~~~~~~div~~t~sKa~g~~G---G 255 (407)
T PRK09064 185 ESVYSMDGDI---APIAEICDLADKYNALTYLDEVHAVGMYGPR-GG--GIAERDGLMDRIDIIEGTLAKAFGVMG---G 255 (407)
T ss_pred eCCCCCCccc---cCHHHHHHHHHHcCCEEEEECCCcccccCCC-CC--ChHHhcCCCCCCeEEEEecchhhhccC---c
Confidence 9999999999 4588899999999999999999862222211 11 11111111 234788999999999888 9
Q ss_pred eEEEEeCChhHHHHHHHHHHhhcccc--ccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 315 AMNVVCSSSDLAARVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
|+++ +++.++.+.. ..... ..+.+..++.++...|+ +. +.....+++++++++++.+.|+ ++|
T Consensus 256 ~~~~---~~~~~~~l~~----~~~~~~~t~~~~~~~~~aa~~al~---~~----~~~~~~~~~~~~~~~~l~~~L~-~~g 320 (407)
T PRK09064 256 YIAG---SAALVDAVRS----YAPGFIFTTSLPPAIAAAALASIR---HL----KESNEERERHQERAAKLKAALD-AAG 320 (407)
T ss_pred eEec---CHHHHHHHHH----hCccccccCcCCHHHHHHHHHHHH---HH----hcCHHHHHHHHHHHHHHHHHHH-HcC
Confidence 9755 7774444432 22211 11333344444433332 11 1123446788889999999999 887
Q ss_pred CCCCcccccCCcceee-ecCC---CHHHHHHHHhcccEEEcCC-------C----cEEEccC-ChhhHHHHHHHHHHHHh
Q 012628 393 SGKDWSFILRQIGMFS-FTGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAGL-SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 393 ~~~~~~~~~~~~g~f~-~~~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~~-~~e~i~~~~~~l~~~~~ 456 (459)
++++.+.++++. .++. ..++.++|++++||.+.+. | ||+++.. +++++++++++|+++++
T Consensus 321 ----~~~~~~~~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~ 396 (407)
T PRK09064 321 ----IPVMPNESHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWA 396 (407)
T ss_pred ----CCCCCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 466656555432 2232 1245667777679998642 2 8887643 88999999999999887
Q ss_pred hc
Q 012628 457 NV 458 (459)
Q Consensus 457 ~~ 458 (459)
++
T Consensus 397 ~~ 398 (407)
T PRK09064 397 RL 398 (407)
T ss_pred Hc
Confidence 64
No 160
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.93 E-value=1.8e-23 Score=209.25 Aligned_cols=327 Identities=14% Similarity=0.072 Sum_probs=210.0
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-C-----CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-----KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-----~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
...++|+...|+ +... +|.+.+++.+.++... . ..|.......+|++.+++++.. ++.+ +
T Consensus 45 ~~~~~~~sn~yl---gl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-------~~~l-~-- 110 (402)
T TIGR01821 45 KDVTVWCSNDYL---GMGQ-HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-------ESAL-V-- 110 (402)
T ss_pred eeEEEeEccCcC---CCCC-CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-------CeEE-E--
Confidence 468899988774 4443 7889999988875421 0 0122344467899999998642 3334 4
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC-CCcEEEEe
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLH 235 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~ii~ 235 (459)
+++|++++..+..++....+|+.|+.....|......++..|+++..++. .|++++++.++... ++++++++
T Consensus 111 ~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~ 183 (402)
T TIGR01821 111 FTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAF 183 (402)
T ss_pred ECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 46678888877544422336777766655665555666677777655543 26777877776432 35788899
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEEcCCcCcccCCCCcc
Q 012628 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 314 (459)
Q Consensus 236 ~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG 314 (459)
++|+||||.+. ++++|.++|++||+++|+||+|....+++... .+...... ...+++++||||.||++| |
T Consensus 184 e~~~~~~G~~~---~l~~i~~l~~~~~~~livDea~~~G~~g~~g~---g~~~~~~~~~~~div~~t~sKa~g~~G---G 254 (402)
T TIGR01821 184 ESVYSMDGDIA---PIEEICDLADKYGALTYLDEVHAVGLYGPRGG---GIAERDGLMHRIDIIEGTLAKAFGVVG---G 254 (402)
T ss_pred cCCCCCCCCcc---CHHHHHHHHHHcCCEEEEeCcccccccCCCCC---ccchhccCCCCCeEEEEechhhhccCC---c
Confidence 99999999995 47889999999999999999977322221111 11111111 123688899999999888 8
Q ss_pred eEEEEeCChhHHHHHHHHHHhhccc--cccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 315 AMNVVCSSSDLAARVKSQLKRLARP--MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
|+++ +++.++.+.. .... .+.+.+..++.++...|+.. ++ .+..++++.++++++.+.|+ ++|
T Consensus 255 ~i~~---~~~~~~~l~~----~~~~~~~t~~~~~~~~aaa~aaL~~~------~~-~~~~~~~~~~~~~~l~~~L~-~~g 319 (402)
T TIGR01821 255 YIAA---SRKLIDAIRS----YAPGFIFTTSLPPAIAAGATASIRHL------KE-SQDLRRAHQENVKRLKNLLE-ALG 319 (402)
T ss_pred eeec---CHHHHHHHHH----hCcCceecCcCCHHHHHHHHHHHHHh------hc-CHHHHHHHHHHHHHHHHHHH-HcC
Confidence 8754 7774444432 2211 12234444444444444321 11 13445666788899999999 887
Q ss_pred CCCCcccccCCcceeee-cCC---CHHHHHHHHhcccEEEcCC-------C----cEEEccC-ChhhHHHHHHHHHHHHh
Q 012628 393 SGKDWSFILRQIGMFSF-TGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAGL-SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 393 ~~~~~~~~~~~~g~f~~-~~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~~-~~e~i~~~~~~l~~~~~ 456 (459)
+++..+.++++.+ ++. ..++.++|++++||.+.+. | ||++... +++++++++++|+++++
T Consensus 320 ----~~~~~~~~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~ 395 (402)
T TIGR01821 320 ----IPVIPNPSHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWD 395 (402)
T ss_pred ----CCcCCCCCCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 4666666664322 232 1345667777679998652 2 8887543 89999999999999987
Q ss_pred hc
Q 012628 457 NV 458 (459)
Q Consensus 457 ~~ 458 (459)
++
T Consensus 396 ~~ 397 (402)
T TIGR01821 396 RL 397 (402)
T ss_pred Hc
Confidence 64
No 161
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.93 E-value=2.7e-24 Score=215.12 Aligned_cols=324 Identities=15% Similarity=0.106 Sum_probs=212.0
Q ss_pred ccCCCCCCccCcHHHHHHHHHHhhcCCCCCC--------CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 92 AYRTEELQPYVLDVVKKAENLMLERGENKEY--------LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 92 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--------~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
.|+|..+..++++.|.+++.+.+........ .....++++|+.+++++... +++|++ |+|+|++
T Consensus 5 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--~~g~t~a 76 (402)
T TIGR02006 5 IYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGAD------SREIVF--TSGATES 76 (402)
T ss_pred EEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHH
Confidence 4555556666789999999887742211111 11234677889999986533 678999 9999999
Q ss_pred HHHHHHHHHH--hCCCCEEEEcCCCCcchHHHh---hhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCC
Q 012628 164 LRLAAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (459)
Q Consensus 164 ~~l~~~~~~~--~~~gd~Vlv~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p 238 (459)
+++++..+.. ..+||+|+++.+.|..+...+ +..|++++.+|++ +++.+|++.+++.+++ ++++++++++
T Consensus 77 ~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~---~~~lv~v~~~ 151 (402)
T TIGR02006 77 NNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRD---DTILVSIMHV 151 (402)
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCC---CCEEEEEECC
Confidence 9998544432 258999999999998765443 4569999999984 4577999999999875 6788889999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
+||||.+ .++++|.++|+++|+++++|+++ .++..+.+ +.....++++.|++|.+|++| +|++++
T Consensus 152 ~n~tG~~---~~~~~I~~l~~~~g~~livD~a~-a~g~~~~~---------~~~~~~D~~~~s~~K~~gp~G--~G~l~~ 216 (402)
T TIGR02006 152 NNEIGVI---QDIAAIGEICRERKVFFHVDAAQ-SVGKIPIN---------VNELKVDLMSISGHKIYGPKG--IGALYV 216 (402)
T ss_pred CcCceec---ccHHHHHHHHHHcCCEEEEEcch-hcCCcccC---------ccccCCCEEEEehhhhcCCCc--eEEEEE
Confidence 9999999 56788999999999999999994 44432111 122345688889999998778 799865
Q ss_pred EeCChhHHHHHHHHHHh--hccccc-cCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012628 319 VCSSSDLAARVKSQLKR--LARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 395 (459)
Q Consensus 319 v~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 395 (459)
.++....+...... ..+... ..++.....++...|+ +. ++.++...++++++++++.+.|+ +++
T Consensus 217 ---~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~---~~---~~~~~~~~~~~~~l~~~l~~~l~-~~~--- 283 (402)
T TIGR02006 217 ---RRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFR---IA---KEEMAQDTAHVLALRDRLLNGIK-SIE--- 283 (402)
T ss_pred ---ccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHH---HH---HHhHHHHHHHHHHHHHHHHHHHh-cCC---
Confidence 32211111110000 000111 1233333222333332 11 23356778899999999999998 653
Q ss_pred Cccccc------CCcceeeecCCCHHHHHHHHhcccEEEcCC-------------------------C--cEEEccC-Ch
Q 012628 396 DWSFIL------RQIGMFSFTGLNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAGL-SL 441 (459)
Q Consensus 396 ~~~~~~------~~~g~f~~~~l~~~~~~~ll~~~gI~v~~g-------------------------g--Ris~~~~-~~ 441 (459)
++.... |....+.|.+.+.+.+...+ .+|.+..| | |+|++.. |+
T Consensus 284 ~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~ 361 (402)
T TIGR02006 284 EVYLNGDLEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTE 361 (402)
T ss_pred CEEEeCCccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCH
Confidence 133221 11123555555554433333 25654332 2 9999876 88
Q ss_pred hhHHHHHHHHHHHHhhc
Q 012628 442 AKCEYLADAIIDSYHNV 458 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~~ 458 (459)
+|+++++++|+++++.+
T Consensus 362 edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 362 EEIDYAVKLVKSAIDKL 378 (402)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988654
No 162
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=1.9e-23 Score=207.53 Aligned_cols=334 Identities=10% Similarity=0.016 Sum_probs=213.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...+|+..|......|. .+|.|.+++.+.++... .. ......++++.+++++....+ .+.+++ +++|+
T Consensus 28 G~~~lD~~s~~~~~~lG~--~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~~~~~----~~~~~~--~~sG~ 96 (377)
T PRK02936 28 GKTYLDFTSGIAVCNLGH--CHPTVTKAVQEQLDDIW--HV-SNLFTNSLQEEVASLLAENSA----GDLVFF--CNSGA 96 (377)
T ss_pred CCEEEECCcchhhccCCC--CCHHHHHHHHHHHHhcc--cc-ccccCCHHHHHHHHHHHhcCC----CCEEEE--eCCcH
Confidence 357889988863222354 37889999999886521 12 223446888999999866532 256888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HhhhCCCCee---eeeeecCCCC--CCCHHHHHHHHHcCCCCcEEEEe
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARVPWS---EYRYYDPKTV--GLDFEGMIADIKAAPGGSFILLH 235 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~-~~~~~G~~v~---~v~~~~~~~~--~~d~e~l~~~i~~~~~~~~~ii~ 235 (459)
++++.+.++......+++|++.+++|..... .+...|.... ..|..++..+ -.|++.+++.+.+ +++++++
T Consensus 97 ~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~ii~ 173 (377)
T PRK02936 97 EANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE---EVAAVML 173 (377)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC---CeEEEEE
Confidence 9999997654433344779999999874422 2222221110 1111100000 1178999988864 6778888
Q ss_pred CCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcc
Q 012628 236 GCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIG 314 (459)
Q Consensus 236 ~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 314 (459)
..+++++|.. .+++.+++|.++|++||+++|+||+|.+++..+ ..+....+ ...+++ .+|||.++ +|+|+|
T Consensus 174 e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g---~~~~~~~~-~~~~di---~t~sK~l~-~G~~ig 245 (377)
T PRK02936 174 EVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG---TLFAYEQF-GLDPDI---VTVAKGLG-NGIPVG 245 (377)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhh-CCCCcE---EEEccccc-CCCccE
Confidence 8899999977 588999999999999999999999998887543 12222121 222333 37999999 899999
Q ss_pred eEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--C
Q 012628 315 AMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD--K 392 (459)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g 392 (459)
|+++ +++ +.+.+.......+.+.+.++|.++...|+.... +...++++++.+++.+.|+ +. +
T Consensus 246 ~v~~---~~~----~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--------~~~~~~~~~~~~~l~~~L~-~~~~~ 309 (377)
T PRK02936 246 AMIG---KKE----LGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ--------PSFLEEVQEKGEYFLQKLQ-EELEH 309 (377)
T ss_pred EEEE---cHH----HHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--------ccHHHHHHHHHHHHHHHHH-HHHhh
Confidence 9866 777 444443322223335677777777766643210 2334555666666666666 42 1
Q ss_pred CCCCcccccCCcceeeecCCC--HHHHHHHHhcccEEEcCCC----cEEEc-cCChhhHHHHHHHHHHHH
Q 012628 393 SGKDWSFILRQIGMFSFTGLN--KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 393 ~~~~~~~~~~~~g~f~~~~l~--~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~e~i~~~~~~l~~~~ 455 (459)
++. +..+.+ .|+++|+.+. .+.+...+.++||.+.|+| ||++. ..+++++++++++|.+++
T Consensus 310 ~~~-~~~v~~-~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 310 LEC-VKNIRG-KGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred CCc-EEeEee-cceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 111 222223 4678887663 3334444455799999876 88852 348999999999998764
No 163
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=2.5e-23 Score=208.61 Aligned_cols=322 Identities=15% Similarity=0.079 Sum_probs=209.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC---C--CCCC-CCCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG---E--NKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~---~--~~~Y-~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+...++|+...|++-.. .|.+.+++.+.+++. . ...| .......+|++.+|+++.. +.+++
T Consensus 53 g~~~~~~~~~~YL~l~~----~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--------~~~~~- 119 (407)
T PRK07179 53 GPDAIILQSNDYLNLSG----HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF--------ESCLL- 119 (407)
T ss_pred CCcEEEeecCCccCCCC----CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC--------CcEEE-
Confidence 45789999888865432 677888888777431 0 1112 1223467888999998632 34667
Q ss_pred ecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEe
Q 012628 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH 235 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~ 235 (459)
++||++|+.++. .....+||.|++..+.|......++..|++++.++. .|++.+++.+++ ..++++++
T Consensus 120 -~~sG~~An~~~l--~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~--~~~~lV~v 187 (407)
T PRK07179 120 -CQSGWAANVGLL--QTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIER--HGPGIIVV 187 (407)
T ss_pred -ECCHHHHHHHHH--HHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHh--cCCeEEEE
Confidence 899999999883 334568999999998888777777778887665532 489999999975 24678888
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC-eEEEEEcCCcCcccCCCCcc
Q 012628 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM-ELLVAQSYSKNLGLYAERIG 314 (459)
Q Consensus 236 ~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~G~RiG 314 (459)
++++||||.+.+ +++|.++|++||+++|+||+|.....+ ... ...+..+ +..+ .++++.|+||.+| .|+|
T Consensus 188 ~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g-~~g-~g~~~~~-~~~~~vdi~~~S~sK~~g---~~~G 258 (407)
T PRK07179 188 DSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHG-PQG-AGLVAEL-GLTSRVHFITASLAKAFA---GRAG 258 (407)
T ss_pred CCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcC-CCC-CchHHhc-CCCCCCCEEEeechHhhh---ccCe
Confidence 999999999965 678999999999999999998643222 111 1111111 1112 3588999999997 2689
Q ss_pred eEEEEeCChhHHHHHHHHHHhhccc-cccCCchHHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 315 AMNVVCSSSDLAARVKSQLKRLARP-MYSNPPVHGARI-VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
|+++ +++.++.+ ...... .++++....+.+ +...++. .+..+..+++++++++++.+.|+ ++|
T Consensus 259 ~l~~---~~~~~~~~----~~~~~~~~~~~t~~~~~~aa~~aal~~-------~~~~~~~~~~l~~~~~~l~~~L~-~~g 323 (407)
T PRK07179 259 IITC---PRELAEYV----PFVSYPAIFSSTLLPHEIAGLEATLEV-------IESADDRRARLHANARFLREGLS-ELG 323 (407)
T ss_pred EEEe---CHHHHHHH----HHhCcCeeeCCCCCHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHH-HcC
Confidence 9865 67743333 221111 122221222122 2222211 11124567889999999999999 886
Q ss_pred CCCCcccccCCcceeeecCC----CHHHHHHHHhcccEEE----cCC-----C--cEEEccC-ChhhHHHHHHHHHHHHh
Q 012628 393 SGKDWSFILRQIGMFSFTGL----NKAQSDNMTNKWHVYM----TKD-----G--RISLAGL-SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 393 ~~~~~~~~~~~~g~f~~~~l----~~~~~~~ll~~~gI~v----~~g-----g--Ris~~~~-~~e~i~~~~~~l~~~~~ 456 (459)
+++. ..+. ++++.+ +.+.+...+.++||.+ .|+ + ||+++.. +++++++++++|+++++
T Consensus 324 ----~~v~-~~~~-i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~ 397 (407)
T PRK07179 324 ----YNIR-SESQ-IIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARD 397 (407)
T ss_pred ----CCCC-CCCC-EEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 4544 3444 443322 2234444455569973 332 2 9998754 89999999999999987
Q ss_pred hc
Q 012628 457 NV 458 (459)
Q Consensus 457 ~~ 458 (459)
+.
T Consensus 398 ~~ 399 (407)
T PRK07179 398 EV 399 (407)
T ss_pred hh
Confidence 64
No 164
>PRK07049 methionine gamma-lyase; Validated
Probab=99.93 E-value=3.3e-23 Score=207.09 Aligned_cols=224 Identities=18% Similarity=0.164 Sum_probs=163.4
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh----h
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----N 195 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~ 195 (459)
.+| +......|++++|++.. .+++++ ++||++++.++ +.+.+.+||+|+++.|+|..+...+ +
T Consensus 78 ~R~-~~Pt~~~Le~~lA~leg--------~~~~iv--~~sG~~Ai~~~--l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~ 144 (427)
T PRK07049 78 SRF-NHPNSEIVEDRLAVYEG--------AESAAL--FSSGMSAIATT--LLAFVRPGDVILHSQPLYGGTETLLAKTFR 144 (427)
T ss_pred cCC-CCcCHHHHHHHHHHHhC--------CCcEEE--EccHHHHHHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHH
Confidence 344 45556899999999963 245767 79999998887 5556789999999999999997664 4
Q ss_pred hCCCCeeeeeeecCCCCCCCHHHHHHHHHcC--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh---cCCeeEEecc
Q 012628 196 DARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE---KNHIPFFDVA 270 (459)
Q Consensus 196 ~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~--~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~---~~~~ii~Dea 270 (459)
..|++++.++. ..|++.+++++.+. .++++++++++||||||.+++.+++.+|++.|+. +++++|+||+
T Consensus 145 ~~Gi~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDet 218 (427)
T PRK07049 145 NFGVGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNT 218 (427)
T ss_pred hcCcEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECC
Confidence 67888777652 24778888777531 1368899999999999999999999999988654 6899999999
Q ss_pred CCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc-cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHH
Q 012628 271 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 349 (459)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (459)
|....... .+ ..+.++++.||||.++ ++|+|+||+++ +++..+.+.. .......+.+...|
T Consensus 219 y~~~~~~~------pl-----~~g~divv~S~SK~~gG~~glr~G~vv~---~~~l~~~l~~----~~~~~g~~ls~~~a 280 (427)
T PRK07049 219 LLGPVFQK------PL-----EHGADLSVYSLTKYVGGHSDLVAGAVLG---RKALIRQVRA----LRSAIGTQLDPHSC 280 (427)
T ss_pred ccccccCC------cc-----ccCCCEEEEcCceeecCCCCcEEEEEEC---CHHHHHHHHH----HHHhcCCCCCHHHH
Confidence 87654211 11 1235688899999999 69999999854 7775555443 22233335666677
Q ss_pred HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 350 RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 350 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
.++...|+. +....++..++++.+.+.|+ +.
T Consensus 281 ~l~~r~L~t----------l~~R~~~~~~~a~~la~~L~-~~ 311 (427)
T PRK07049 281 WMLGRSLET----------LVLRMERANRNARAVAEFLR-DH 311 (427)
T ss_pred HHHHcCCCh----------HHHHHHHHHHHHHHHHHHHH-hC
Confidence 776655542 34445666888889999998 65
No 165
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=3.1e-23 Score=205.66 Aligned_cols=322 Identities=11% Similarity=0.071 Sum_probs=205.8
Q ss_pred CcHHHHHHHHHHhhcC--CCCCCCC-CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh--CC
Q 012628 102 VLDVVKKAENLMLERG--ENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FP 176 (459)
Q Consensus 102 ~~~~v~~a~~~~~~~~--~~~~Y~~-~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~--~~ 176 (459)
..|.+.+++.+.+... ....|.. ..-..++++.++++++.. +.++++ ++||++++..+...+... .+
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~------~~~~~~--~~ggt~a~~~a~~~~~~~~~~~ 103 (371)
T PRK13520 32 PHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLP------DAYGYI--TSGGTEANIQAVRAARNLAKAE 103 (371)
T ss_pred chHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCC------CCCeEE--ecCcHHHHHHHHHHHHhhccCC
Confidence 3788889888877542 1111211 111246777777776422 456777 899999998875444322 25
Q ss_pred CCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 012628 177 GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (459)
Q Consensus 177 gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~ 256 (459)
||+|++.+++|..+...++..|++++.+|. ++++.+|++.+++++++ ++++++++.++||||.+ .++++|.+
T Consensus 104 ~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~--~~~~~~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~---~~l~~I~~ 175 (371)
T PRK13520 104 KPNIVVPESAHFSFDKAADMLGVELRRAPL--DDDYRVDVKAVEDLIDD---NTIGIVGIAGTTELGQV---DPIPELSK 175 (371)
T ss_pred CceEEecCcchHHHHHHHHHcCceEEEecC--CCCCcCCHHHHHHHHhh---CCEEEEEEcCCcCCccc---CCHHHHHH
Confidence 799999999999999888999999999998 34668999999999986 56666667789999999 55888999
Q ss_pred HHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhh
Q 012628 257 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL 336 (459)
Q Consensus 257 l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~ 336 (459)
+|+++|+++++|++|..+..+ .......+. ....+...+..|.+| |+++|.++|+++ ..+++..+.+.. ....
T Consensus 176 l~~~~g~~livD~a~~~~~~~-~~~~~~~~~--~~~~~vd~~~~s~~K-~~~a~~~~G~~~--~~~~~~~~~l~~-~~~~ 248 (371)
T PRK13520 176 IALENGIFLHVDAAFGGFVIP-FLDDPPNFD--FSLPGVDSITIDPHK-MGLAPIPAGGIL--FRDESYLDALAV-DTPY 248 (371)
T ss_pred HHHHcCCCEEEEecchhHHHH-hhcCCCCcc--ccCCCCceEEECCcc-ccCccCCceEEE--EcCHHHHHhhcc-cCcc
Confidence 999999999999998765421 000000000 011223455668888 555788999884 345553333211 0000
Q ss_pred c----ccc-ccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc-cccCCcceeeec
Q 012628 337 A----RPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-FILRQIGMFSFT 410 (459)
Q Consensus 337 ~----~~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~~~~~g~f~~~ 410 (459)
. +.. ....+.....++...|..- ..+.+++.+++..++++++.+.|+ ++| ++ +..+..+++.+.
T Consensus 249 ~~~~~~~~~~gt~~~~~~~~~~~al~~l-----~~~g~~~~~~~~~~~~~~l~~~L~-~~g----~~~~~~~~~~~v~~~ 318 (371)
T PRK13520 249 LTSKKQATLTGTRSGAGVAATYAVMKYL-----GREGYRKVVERCMENTRWLAEELK-ERG----FEPVIEPVLNIVAFD 318 (371)
T ss_pred ccCCCCcceEeeccChHHHHHHHHHhhh-----cHhHHHHHHHHHHHHHHHHHHHHH-hCC----CEEecCCCceEEEEe
Confidence 0 000 0011122222222223210 012356778889999999999999 876 45 445555544332
Q ss_pred CCCHH-HHHHHHhcccEEEcCCC-----cEEEccC-ChhhHHHHHHHHHHHHhh
Q 012628 411 GLNKA-QSDNMTNKWHVYMTKDG-----RISLAGL-SLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 411 ~l~~~-~~~~ll~~~gI~v~~gg-----Ris~~~~-~~e~i~~~~~~l~~~~~~ 457 (459)
--+.+ +...|.+ +||.+..++ |||+... +++++++++++|++++++
T Consensus 319 ~~~~~~v~~~L~~-~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 319 DPNPDEVREKLRE-RGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred cCCHHHHHHHHHH-CCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhhC
Confidence 11334 4555555 599987753 9987644 889999999999988753
No 166
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=7.5e-23 Score=204.20 Aligned_cols=326 Identities=11% Similarity=0.106 Sum_probs=209.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+|+..|..-..-|. -+|.|.+++.+.++... ...+.......+|.+.++++. + .+.+++ +++|
T Consensus 39 G~~~lD~~~g~~~~~lGh--~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~--~~SG 106 (396)
T PRK04073 39 GNRYMDMLSAYSAVNQGH--RHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT----G----KDMVLP--MNTG 106 (396)
T ss_pred CCEEEEcCCCHHhccCCC--CCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC----C----CCeEEE--cCCh
Confidence 456888877754222233 37889999988876421 111222233345666666552 1 257888 9999
Q ss_pred hhHHHHHHHHHHHh-------CCC-CEEEEcCCCCcchH-HHhhhCCCC------------eeeeeeecCCCCCCCHHHH
Q 012628 161 TGSLRLAAALIERY-------FPG-AKVLISSPTWGNHK-NIFNDARVP------------WSEYRYYDPKTVGLDFEGM 219 (459)
Q Consensus 161 t~a~~l~~~~~~~~-------~~g-d~Vlv~~p~y~~~~-~~~~~~G~~------------v~~v~~~~~~~~~~d~e~l 219 (459)
++|++.+.++...+ .+| ++|+..+-+|.+.. ..+...+.. +..+|. .|++.+
T Consensus 107 seA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 179 (396)
T PRK04073 107 AEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEAL 179 (396)
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHH
Confidence 99999998776554 134 78888887776543 222222211 122222 278999
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012628 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (459)
Q Consensus 220 ~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~-~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (459)
++.+++ +++++++++++||||.+++++ .+++|.++|++||+++|+||+|.+++..+ ..+.. ......++++
T Consensus 180 ~~~i~~---~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g---~~~~~-~~~~~~pdi~- 251 (396)
T PRK04073 180 KAAITP---NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTG---KLFAC-DWDNVTPDMY- 251 (396)
T ss_pred HHhccc---CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCc---HHHHh-hhcCCCCCEE-
Confidence 888865 678888899999999998765 69999999999999999999999886532 11111 1112223333
Q ss_pred EEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
+|||.+|.+|+|+||+++ +++. .+.+.......+.+.+.+++.++...|+.. .+ +...++.++
T Consensus 252 --~~sK~lg~gg~~ig~~~~---~~~i----~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~------~~--~~l~~~~~~ 314 (396)
T PRK04073 252 --ILGKALGGGVFPISCVAA---NRDI----LGVFTPGSHGSTFGGNPLACAVSIAALEVL------EE--EKLPERSLE 314 (396)
T ss_pred --EecccccCCCCcceEEEE---cHHH----HhhhcCCCCCCCCCCCHHHHHHHHHHHHHH------Hh--cCHHHHHHH
Confidence 589999988899999976 7774 443332222233355667777766655311 00 134466677
Q ss_pred HHHHHHHHHhhccCCCCCcccccCCcceeeecCC---CHHHHHHHHhcccEEEcCCC----cEEEc-cCChhhHHHHHHH
Q 012628 379 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADA 450 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~e~i~~~~~~ 450 (459)
+++++.+.|+ +++.+ .+..+.+. |.|+++.+ +.++.++|++ +||.+.+.+ ||+.. ..++|++++++++
T Consensus 315 ~~~~l~~~L~-~l~~~-~i~~~~~~-g~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~ 390 (396)
T PRK04073 315 LGEYFKEQLK-EIDNP-MIKEVRGR-GLFIGVELNEPARPYCEALKE-EGLLCKETHETVIRFAPPLVITKEELDWAFEK 390 (396)
T ss_pred HHHHHHHHHH-hhcCC-cccceecc-eEEEEEEecchHHHHHHHHHH-CCeEEecCCCCEEEEECCcccCHHHHHHHHHH
Confidence 7899999998 76432 13334455 45555544 2355667666 599998754 88843 2299999999999
Q ss_pred HHHHH
Q 012628 451 IIDSY 455 (459)
Q Consensus 451 l~~~~ 455 (459)
|++++
T Consensus 391 l~~~l 395 (396)
T PRK04073 391 IKAVL 395 (396)
T ss_pred HHHHh
Confidence 99875
No 167
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.92 E-value=6e-23 Score=206.37 Aligned_cols=344 Identities=8% Similarity=0.005 Sum_probs=216.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...+|+..|..-...|. -+|.+.+++.+.+++.. +.+.+..+.+.. ..+++++....+... .+++++ +.+|+
T Consensus 40 G~~~lD~~~g~~~~~lGh--~~~~i~~a~~~~~~~~~-~~~~~~~~~~~~-~~la~~l~~~~~~~~-~~~~~f--~~sGs 112 (425)
T PRK08088 40 GREYLDFAGGIAVLNTGH--LHPKVVAAVEAQLKKLS-HTCFQVLAYEPY-LELCEKMNQKVPGDF-AKKTLL--VTTGS 112 (425)
T ss_pred CCEEEEcCCchhhcCCCC--CCHHHHHHHHHHHhhCC-CccccccCCHHH-HHHHHHHHHhCCCCC-CCEEEE--eCCcH
Confidence 356889988765222233 37889999998886532 222222223333 356666554333222 146777 88899
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCee----------------eeeeecCCCCCC--CHHHHHHHH
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWS----------------EYRYYDPKTVGL--DFEGMIADI 223 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~----------------~v~~~~~~~~~~--d~e~l~~~i 223 (459)
+|++.+.++...+....+|+..+++|.+....+...+.... .+|.+ ..+... +++.+++.+
T Consensus 113 ea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~l 191 (425)
T PRK08088 113 EAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCP-LHGVSEDDAIASIERIF 191 (425)
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcc-ccCccHHHHHHHHHHHH
Confidence 99999988876666567788889999877655444332211 12221 111111 155678777
Q ss_pred Hc--C-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEE
Q 012628 224 KA--A-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (459)
Q Consensus 224 ~~--~-~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (459)
+. . .+...+++-+..+|+++..++++.+++|.++|++||+++|+||+|.+++..+ ..+++.. ...+.-+.
T Consensus 192 ~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g---~~~~~~~----~~~~pdi~ 264 (425)
T PRK08088 192 KNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTG---TLFAMEQ----MGVAADLT 264 (425)
T ss_pred HhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---chhHHhh----cCCCCCEE
Confidence 52 1 2234455566678888888999999999999999999999999999876532 1222211 12233468
Q ss_pred cCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012628 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 380 (459)
Q Consensus 301 S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 380 (459)
||||.++ +|+|+||+++ +++.++.+ .......+.+.+.+.|.++..+|+.... .+.+++.++..+.++
T Consensus 265 s~sK~l~-~G~rig~v~~---~~~~~~~~----~~~~~~~t~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~ 332 (425)
T PRK08088 265 TFAKSIA-GGFPLAGVTG---RAEVMDAI----APGGLGGTYAGNPIACAAALAVLKVFEQ----ENLLQKANALGEKLK 332 (425)
T ss_pred EEecccc-CCCcceeeEe---cHHHHhhc----CCCCCCCCCCcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHH
Confidence 9999999 8999999976 87844443 3333344446677788888877764322 233455555555555
Q ss_pred HHHHHHHhhccCCCCCcccccCCcceeeecCC-------------CHHHHHHHHhcccEEEcCCC------cEEEcc-CC
Q 012628 381 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-------------NKAQSDNMTNKWHVYMTKDG------RISLAG-LS 440 (459)
Q Consensus 381 ~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l-------------~~~~~~~ll~~~gI~v~~gg------Ris~~~-~~ 440 (459)
+.+.+.+. +.+. +..+... |+++|+.+ ..++.+.+++ +||.+.+++ ||+++. .+
T Consensus 333 ~~l~~l~~-~~~~---~~~v~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~iRl~~~~~~t 406 (425)
T PRK08088 333 DGLLAIAE-KHPE---IGDVRGL-GAMIAIELFEDGDHSKPNAKLTAQIVARARD-KGLILLSCGPYYNVLRILVPLTIE 406 (425)
T ss_pred HHHHHHHH-hCCC---eEEEecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHh-CCCEEecCCCCCCEEEEECCCCcC
Confidence 55544444 4431 2222223 77888754 1233455555 599887754 999884 48
Q ss_pred hhhHHHHHHHHHHHHhhc
Q 012628 441 LAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 441 ~e~i~~~~~~l~~~~~~~ 458 (459)
+++|++++++|.+++.+.
T Consensus 407 ~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 407 DAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
No 168
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.92 E-value=2.1e-23 Score=204.83 Aligned_cols=299 Identities=12% Similarity=0.011 Sum_probs=208.0
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHH-h-------
Q 012628 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-Y------- 174 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~-~------- 174 (459)
+..+.+.+...++... ..|....+..++++++++++.+..|.+..+.++++ |+|||+++.++...+.. .
T Consensus 12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~--t~ggt~a~~~al~~~~~~~~~~~~~~ 88 (345)
T cd06450 12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVF--TSGGSESNLLALLAARDRARKRLKAG 88 (345)
T ss_pred HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEE--eCChhHHHHHHHHHHHHHhhhhhhcc
Confidence 4556666666665433 55888889999999999998776665434567888 99999999998544422 1
Q ss_pred --CC--CCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc---CCCCcEEEEeCCCCCCCCCCCC
Q 012628 175 --FP--GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPT 247 (459)
Q Consensus 175 --~~--gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~ii~~~p~NPTG~~~s 247 (459)
.+ ++.|+++.++|..+...++..|++++.+|++ +++.+|++.+++++++ ...+++++++++++||||.+
T Consensus 89 ~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~-- 164 (345)
T cd06450 89 GGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVD--EDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI-- 164 (345)
T ss_pred cccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeC--CCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC--
Confidence 12 3488889999999988888889999999984 3458999999999975 22256778889999999998
Q ss_pred HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHH
Q 012628 248 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA 327 (459)
Q Consensus 248 ~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~ 327 (459)
+++++|+++|+++|+++++|++|..+.... +..... .....+-+.+..|++|.++ ++.|+|++++ +
T Consensus 165 -~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~---~~~~~~-~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~---~----- 230 (345)
T cd06450 165 -DPLEEIADLAEKYDLWLHVDAAYGGFLLPF---PEPRHL-DFGIERVDSISVDPHKYGL-VPLGCSAVLV---R----- 230 (345)
T ss_pred -CCHHHHHHHHHHhCCeEEEechhhHHHhhC---hhhHHH-hcCccccCEEEEchhHhhC-CCcchHHHHH---H-----
Confidence 788999999999999999999987766421 110100 1111234567789999765 5677888732 1
Q ss_pred HHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc-cCCcce
Q 012628 328 RVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI-LRQIGM 406 (459)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-~~~~g~ 406 (459)
.+++.++...+.. ..++++.++..++++++.+.|+ +++. +.+. .++.++
T Consensus 231 ------------------~~~~~~~l~~l~~--------~g~~~~~~~~~~~~~~l~~~L~-~~~~---~~~~~~~~~~i 280 (345)
T cd06450 231 ------------------ALKLWATLRRFGR--------DGYGEHIDRIVDLAKYLAELIR-ADPG---FELLGEPNLSL 280 (345)
T ss_pred ------------------HHHHHHHHHHHhH--------HHHHHHHHHHHHHHHHHHHHHh-cCCC---eEEecCCceeE
Confidence 3333344433432 2356778888889999999998 7631 4443 356676
Q ss_pred eeec--C-----CC-HHHHHHHHhcccEEEcCC------C--cEEEccC--ChhhHHHHHHHHHH
Q 012628 407 FSFT--G-----LN-KAQSDNMTNKWHVYMTKD------G--RISLAGL--SLAKCEYLADAIID 453 (459)
Q Consensus 407 f~~~--~-----l~-~~~~~~ll~~~gI~v~~g------g--Ris~~~~--~~e~i~~~~~~l~~ 453 (459)
+.|. + .+ .++.++|.+ +|+.+.++ + ||+++.. +++++++++++|++
T Consensus 281 v~f~~~~~~~~~~~~~~i~~~L~~-~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 281 VCFRLKPSVKLDELNYDLSDRLNE-RGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEEECCcchhhHHHHHHHHHHHh-cCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 6654 2 12 244556655 45443332 2 9999853 78999999999875
No 169
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=3.9e-22 Score=199.77 Aligned_cols=327 Identities=16% Similarity=0.106 Sum_probs=208.5
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-C-----CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-----KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-----~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
...++|+...|+ +... +|+|.+++.+.++... . ..+....-..+|++.+++++.. +..++
T Consensus 45 ~~~~~~~sn~yl---gl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~-------~~~~~--- 110 (406)
T PRK13393 45 REVTVWCSNDYL---GMGQ-HPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK-------EAALL--- 110 (406)
T ss_pred ccEEEeeccccc---CCCC-CHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEE---
Confidence 468899988774 3332 7889999988875421 0 0111222357788888888642 23344
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC-CCCcEEEEe
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLH 235 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~ii~ 235 (459)
.++|++++..+.+.+....+||.|+.....|......++..|++++.++. .|++.+++.++.. +++++++++
T Consensus 111 ~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~ 183 (406)
T PRK13393 111 FTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAF 183 (406)
T ss_pred eCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEE
Confidence 45666788887554433337887777777777767777778887776664 2677777777642 235778889
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEEcCCcCcccCCCCcc
Q 012628 236 GCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIG 314 (459)
Q Consensus 236 ~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG 314 (459)
++++||+|.+. ++++|.++|+++|+++|+||+|....++... . .+...... ...+++++||||.||++| |
T Consensus 184 ~~v~~~~G~~~---~l~~i~~l~~~~~~~livDea~~~g~~g~~G-~--g~~~~~~~~~~~~i~~~tlsKa~g~~G---G 254 (406)
T PRK13393 184 ESVYSMDGDIA---PIAEICDVAEKHGAMTYLDEVHAVGLYGPRG-G--GIAEREGLADRLTIIEGTLAKAFGVMG---G 254 (406)
T ss_pred cCCCCCCCchh---CHHHHHHHHHHcCCEEEEECCccccccCCCC-C--chhhhcCCCCCCeEEEEeCchhhcccC---c
Confidence 99999999994 5888999999999999999997622222211 1 11111111 123677899999999888 8
Q ss_pred eEEEEeCChhHHHHHHHHHHhhcccc--ccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 315 AMNVVCSSSDLAARVKSQLKRLARPM--YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 315 ~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
|+++ +++..+.+ ....+.. +.+.+..++.++...|+.. ++. ...+++++++++++.+.|+ ++|
T Consensus 255 ~~~~---~~~~~~~l----~~~~~~~~~t~~~~p~~~aa~~aaL~~~------~~~-~~~~~~~~~~~~~l~~~L~-~~g 319 (406)
T PRK13393 255 YITG---SAALCDFI----RSFASGFIFTTSLPPAVAAGALASVRHL------KAS-SAERERHQDRVARLRARLD-KAG 319 (406)
T ss_pred eeeC---CHHHHHHH----HHhCcCceecCccCHHHHHHHHHHHHHH------hhC-HHHHHHHHHHHHHHHHHHH-HcC
Confidence 8754 77744443 3322221 2233444444444444311 111 1234567788999999998 776
Q ss_pred CCCCcccccCCcceeee-cCC---CHHHHHHHHhcccEEEcC--------C-C--cEEEccC-ChhhHHHHHHHHHHHHh
Q 012628 393 SGKDWSFILRQIGMFSF-TGL---NKAQSDNMTNKWHVYMTK--------D-G--RISLAGL-SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 393 ~~~~~~~~~~~~g~f~~-~~l---~~~~~~~ll~~~gI~v~~--------g-g--Ris~~~~-~~e~i~~~~~~l~~~~~ 456 (459)
++++.+.+.++.+ ++. ..++.++|++++||.+.+ | + ||++... +++++++++++|.++++
T Consensus 320 ----~~~~~~~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~ 395 (406)
T PRK13393 320 ----IPHLPNPSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWA 395 (406)
T ss_pred ----CCcCCCCCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 4556666665432 232 134456777767999864 2 2 8887643 89999999999999887
Q ss_pred hc
Q 012628 457 NV 458 (459)
Q Consensus 457 ~~ 458 (459)
++
T Consensus 396 ~~ 397 (406)
T PRK13393 396 RL 397 (406)
T ss_pred hc
Confidence 53
No 170
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=1.7e-22 Score=198.66 Aligned_cols=315 Identities=17% Similarity=0.108 Sum_probs=199.8
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
..+||.+ |.. +.-+.+++++++.+++.+..+. |. +.+++++++.+++...+| .+++++ |+|+|.
T Consensus 8 ~~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~--~~g~t~ 71 (363)
T TIGR01437 8 KKVINAS-GKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVI--VSSASA 71 (363)
T ss_pred ceEEECC-cEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEE--EcCHHH
Confidence 3566644 333 3335555699999999998743 32 234556665555544444 246778 999999
Q ss_pred HHHHHHHHHHHhCCCC---------------EEEEcCCCCcch----HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHH
Q 012628 163 SLRLAAALIERYFPGA---------------KVLISSPTWGNH----KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd---------------~Vlv~~p~y~~~----~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i 223 (459)
|++++ +.+.+.+|| +|+++.|.|..| ...+...|+++++++. ++.+|++++++++
T Consensus 72 al~~a--l~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai 145 (363)
T TIGR01437 72 GIAQS--VAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAI 145 (363)
T ss_pred HHHHH--HHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhc
Confidence 99998 455577887 999999888766 5677889999999876 3469999999999
Q ss_pred HcCCCCcEEEE-eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcC
Q 012628 224 KAAPGGSFILL-HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (459)
Q Consensus 224 ~~~~~~~~~ii-~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 302 (459)
++ ++++++ +++|+||+|.+.+ +++|+++|++||+++|+|++|.. . . ..... .+.+++++|+
T Consensus 146 ~~---~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~-~-------~---~~~~~-~g~D~~~~S~ 207 (363)
T TIGR01437 146 TE---KTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE-D-------L---QKYYR-LGADLVIYSG 207 (363)
T ss_pred Ch---hceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC-c-------h---HHHHH-cCCCEEEEeC
Confidence 86 566554 6889999999955 56799999999999999999751 1 1 11111 2346788999
Q ss_pred CcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhcccccc-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012628 303 SKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 381 (459)
Q Consensus 303 SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (459)
+|.+ +|++.|+++. +++.++.+........+..-. ..+..+..++...+.+. -.+..+.+.++++
T Consensus 208 ~K~l--~gp~~G~l~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~---------~~~~~~~~~~~~~ 273 (363)
T TIGR01437 208 AKAI--EGPTSGLVLG---KKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLST---------GKESGAEMVAKLT 273 (363)
T ss_pred Cccc--CCCceEEEEE---cHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHcc---------CcccHHHHHHHHH
Confidence 9976 5888999855 666444432111110000000 11122333332222211 1122334445667
Q ss_pred HHHHHHhhccCCCCCcccccC--Ccce------eeec----CCCHHHHHHHHhccc--EEEcC----CC--cEEEccCCh
Q 012628 382 KLFDSLSAKDKSGKDWSFILR--QIGM------FSFT----GLNKAQSDNMTNKWH--VYMTK----DG--RISLAGLSL 441 (459)
Q Consensus 382 ~l~~~L~~~~g~~~~~~~~~~--~~g~------f~~~----~l~~~~~~~ll~~~g--I~v~~----gg--Ris~~~~~~ 441 (459)
.+.+.|. +++ ++.+..+ ..+. ..|. +++.+.+...|++++ |.+++ .| |+++...++
T Consensus 274 ~l~~~L~-~i~---g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~~~~ 349 (363)
T TIGR01437 274 PFIEALN-TLK---GVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRSVTG 349 (363)
T ss_pred HHHHHHh-cCC---CeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeecCCH
Confidence 7888888 762 1444421 1111 1121 456655555555456 77774 34 777777799
Q ss_pred hhHHHHHHHHHHHH
Q 012628 442 AKCEYLADAIIDSY 455 (459)
Q Consensus 442 e~i~~~~~~l~~~~ 455 (459)
+|++.++++|++.+
T Consensus 350 ~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 350 GQLDIIVERIREIV 363 (363)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998764
No 171
>PRK14012 cysteine desulfurase; Provisional
Probab=99.92 E-value=3.9e-23 Score=206.97 Aligned_cols=324 Identities=16% Similarity=0.128 Sum_probs=203.7
Q ss_pred ccCCCCCCccCcHHHHHHHHHHhh--cCCCCC--------CCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 92 AYRTEELQPYVLDVVKKAENLMLE--RGENKE--------YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 92 ~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~--------Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
.|+|..+..++++.+.+++.+.+. ...... |.......++|+.+++++... +++|++ ++|+|
T Consensus 5 iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~------~~~v~~--~~g~t 76 (404)
T PRK14012 5 IYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGAD------PREIVF--TSGAT 76 (404)
T ss_pred EEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcC------cCeEEE--eCCHH
Confidence 566776776778999999988774 211010 111234667889999987543 678988 99999
Q ss_pred hHHHHHHHHHHH--hCCCCEEEEcCCCCcchHHHh---hhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeC
Q 012628 162 GSLRLAAALIER--YFPGAKVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 236 (459)
Q Consensus 162 ~a~~l~~~~~~~--~~~gd~Vlv~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~ 236 (459)
++++++...+.. +.+||+|+++.++|+.+...+ +..|++++.++.+ .++.+|++.+++++++ ++++++++
T Consensus 77 ~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~--~~g~~d~~~l~~~i~~---~t~lv~~~ 151 (404)
T PRK14012 77 ESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ--SNGIIDLEKLEAAMRD---DTILVSIM 151 (404)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC--CCCcCCHHHHHHhcCC---CCEEEEEE
Confidence 999998544422 358999999999997765444 3469999999884 4677899999999976 78899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceE
Q 012628 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (459)
Q Consensus 237 ~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 316 (459)
+++||||.+ .++++|.++|+++|+++|+|+++ .++....+ ......++++.|++|.+|++| +|++
T Consensus 152 ~~~n~tG~~---~~~~~I~~la~~~g~~vivD~a~-~~g~~~~~---------~~~~~~D~~~~s~~K~~gp~g--~G~l 216 (404)
T PRK14012 152 HVNNEIGVI---QDIAAIGEICRERGIIFHVDAAQ-SVGKVPID---------LSKLKVDLMSFSAHKIYGPKG--IGAL 216 (404)
T ss_pred CcCCCccch---hhHHHHHHHHHHcCCEEEEEcch-hcCCcccC---------cccCCCCEEEEehhhccCCCc--eEEE
Confidence 999999999 56789999999999999999995 44422111 112234677789999888544 8998
Q ss_pred EEEeCChhHHHHHHHHHHhh--ccccccC-CchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 012628 317 NVVCSSSDLAARVKSQLKRL--ARPMYSN-PPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 393 (459)
Q Consensus 317 ~~v~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 393 (459)
++ +++...++....... .+....+ ++..........+. +. +..++...++.+++++++.+.|+ ++.
T Consensus 217 ~~---~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~---~~---~~~~~~~~~~~~~l~~~l~~~L~-~~~- 285 (404)
T PRK14012 217 YV---RRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAAR---IA---KEEMATENERIRALRDRLWNGIK-DIE- 285 (404)
T ss_pred EE---ecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHH---HH---HhhHHHHHHHHHHHHHHHHHHHh-cCC-
Confidence 65 322111111100000 0001111 22221111112221 11 12245567788888888888888 653
Q ss_pred CCCccccc--C---CcceeeecC-CCHHHHHHHHhcccEEEcCC-------------------------C--cEEEccC-
Q 012628 394 GKDWSFIL--R---QIGMFSFTG-LNKAQSDNMTNKWHVYMTKD-------------------------G--RISLAGL- 439 (459)
Q Consensus 394 ~~~~~~~~--~---~~g~f~~~~-l~~~~~~~ll~~~gI~v~~g-------------------------g--Ris~~~~- 439 (459)
++.... + ...+++|.. .+.+.+...++ ++.+..| + |||+...
T Consensus 286 --~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~ 361 (404)
T PRK14012 286 --EVYLNGDLEQRVPGNLNVSFNYVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT 361 (404)
T ss_pred --CEEEeCCccccCCCEEEEEEeCcCHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCC
Confidence 122221 1 112233333 33333333333 3433221 2 9998865
Q ss_pred ChhhHHHHHHHHHHHHhhc
Q 012628 440 SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 440 ~~e~i~~~~~~l~~~~~~~ 458 (459)
+++|+++++++|+++++.+
T Consensus 362 t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 362 TEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988754
No 172
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=7.1e-23 Score=203.43 Aligned_cols=321 Identities=18% Similarity=0.155 Sum_probs=205.4
Q ss_pred cCCCCCCc-cCcHHHHHHHHHHhhcCC-C---CCCCC----CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 93 YRTEELQP-YVLDVVKKAENLMLERGE-N---KEYLP----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 93 ~~~~~~~~-~~~~~v~~a~~~~~~~~~-~---~~Y~~----~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
|+|..+.+ +.|+.+.+++.+.+.... . ..|.. ..+..++|+.+++++.... +++|++ |.|++++
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~-----~~~v~~--~~g~t~a 74 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPS-----SAHVVF--TNNATTA 74 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCC-----CCeEEE--eCCHHHH
Confidence 34444433 247889999888775421 1 12322 2567899999999975431 357988 9999999
Q ss_pred HHHHHHHHHHhCCCCEEEEcCCCCcchHH----HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 164 LRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 164 ~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
++++ +.+.+.+||+|+++.++|..+.. ..+..|++++.++.+ .++.+|++.+++++++ +++++++++||
T Consensus 75 l~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~---~~~~v~~~~~~ 147 (376)
T TIGR01977 75 LNIA--LKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIKT---NTKLIVVSHAS 147 (376)
T ss_pred HHHH--HHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcCC---CCeEEEEECCC
Confidence 9987 44456799999999999877543 445569999999884 4567899999999965 67888899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc-cCCCCcceEEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNV 318 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~ 318 (459)
||||.+++ +++|.++|+++|+++|+|+++ .++....+ ......++++.|++|.++ ++| +|++++
T Consensus 148 n~tG~~~~---~~~i~~l~~~~~~~livD~a~-~~g~~~~~---------~~~~~~D~~~~s~~K~l~~p~g--~g~l~~ 212 (376)
T TIGR01977 148 NVTGTILP---IEEIGELAQENGIFFILDAAQ-TAGVIPID---------MTELAIDMLAFTGHKGLLGPQG--TGGLYI 212 (376)
T ss_pred CCccccCC---HHHHHHHHHHcCCEEEEEhhh-ccCccCCC---------chhcCCCEEEecccccccCCCC--ceEEEE
Confidence 99999965 567889999999999999994 44432111 122345688899999875 345 677754
Q ss_pred EeCChhHHHHHHHH---HHh--------h-ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 319 VCSSSDLAARVKSQ---LKR--------L-ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 386 (459)
Q Consensus 319 v~~~~~~~~~~~~~---~~~--------~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (459)
.++..+..+... ... . .+...++++.....+....|+ +.. +..++.++++.+++.+++.+.
T Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~---~~~--~~g~~~~~~~~~~l~~~~~~~ 285 (376)
T TIGR01977 213 --REGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIK---FIE--KIGIANIAKKECMLTEKLLNG 285 (376)
T ss_pred --cCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHH---HHH--HhCHHHHHHHHHHHHHHHHHH
Confidence 232211111100 000 0 001111233332222222221 110 123567788889999999999
Q ss_pred HhhccCCCCCcccccC-----Ccceeee--cCCCHHHH-HHHHhcccEEEcCC----------------C--cEEEccC-
Q 012628 387 LSAKDKSGKDWSFILR-----QIGMFSF--TGLNKAQS-DNMTNKWHVYMTKD----------------G--RISLAGL- 439 (459)
Q Consensus 387 L~~~~g~~~~~~~~~~-----~~g~f~~--~~l~~~~~-~~ll~~~gI~v~~g----------------g--Ris~~~~- 439 (459)
|. +.+. +++..+ ..+...+ .+.+.+.+ ..|.+++||.+..| + ||++...
T Consensus 286 l~-~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~ 361 (376)
T TIGR01977 286 LR-EINK---VKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFN 361 (376)
T ss_pred Hh-cCCC---eEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCC
Confidence 98 6531 444332 2233222 24555554 45555559988653 2 9998765
Q ss_pred ChhhHHHHHHHHHH
Q 012628 440 SLAKCEYLADAIID 453 (459)
Q Consensus 440 ~~e~i~~~~~~l~~ 453 (459)
+++++++++++|++
T Consensus 362 t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 362 TEEEIEKLLEALSE 375 (376)
T ss_pred CHHHHHHHHHHHhh
Confidence 88999999999975
No 173
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.91 E-value=2.6e-22 Score=199.14 Aligned_cols=318 Identities=10% Similarity=0.044 Sum_probs=198.2
Q ss_pred cHHHHHHHHHHhhcC--CCCCCCC-CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh----C
Q 012628 103 LDVVKKAENLMLERG--ENKEYLP-IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY----F 175 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~--~~~~Y~~-~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~----~ 175 (459)
.+.+.+++...+... ....|.. ..-..++++.++++++.. ++++++ +.|+++++.++...+..+ .
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~------~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~ 104 (373)
T TIGR03812 33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLP------DAYGYI--VSGGTEANIQAVRAAKNLAREEK 104 (373)
T ss_pred hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCC------CCCeEE--eccHHHHHHHHHHHHHHHHhccC
Confidence 556677776665321 1112311 112256778888886442 466777 899999988764333221 3
Q ss_pred CCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012628 176 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (459)
Q Consensus 176 ~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~ 255 (459)
+||+|++++++|..|...++..|++++.+|++ .++.+|++++++.+++ ++..++..+|+||||.+ .++++|.
T Consensus 105 ~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~---~~~~vv~~~~~~~tG~~---~~~~~i~ 176 (373)
T TIGR03812 105 RTPNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDD---NTIGIVGIAGTTELGQI---DDIEELS 176 (373)
T ss_pred CCcEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhh---CcEEEEEECCCCCCCcc---CCHHHHH
Confidence 67999999999999999999999999999984 4678999999999976 44433434489999999 6788899
Q ss_pred HHHHhcCCeeEEeccCCCCCCC--CCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHH
Q 012628 256 DVIQEKNHIPFFDVAYQGFASG--SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL 333 (459)
Q Consensus 256 ~l~~~~~~~ii~Deay~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~ 333 (459)
++|+++|+++++|++|..+... ........+. +....-..+..|.+| |++++.|.|+++ ..+++.++.+...
T Consensus 177 ~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d--~~~~~~d~~~~s~~K-~~~~~~~~G~~~--~~~~~~~~~l~~~- 250 (373)
T TIGR03812 177 KIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD--FSLPGVQSITIDPHK-MGLSPIPAGGIL--FRSKSYLKYLSVD- 250 (373)
T ss_pred HHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc--ccCCCCCEEEECccc-cCCCcCCceEEE--EeCHHHHhhhccc-
Confidence 9999999999999998654310 0000000000 011122345568889 666788899774 3466644433110
Q ss_pred Hhhccc----cc-cCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceee
Q 012628 334 KRLARP----MY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS 408 (459)
Q Consensus 334 ~~~~~~----~~-~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~ 408 (459)
...... .+ ...+.....++...|+.- . ++.+++..+++.++++++.+.|+ ++|. ..+..+..++..
T Consensus 251 ~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l--~---~~g~~~~~~~~~~~~~~l~~~L~-~~g~---~~~~~~~~~~v~ 321 (373)
T TIGR03812 251 APYLTVKKQATITGTRSGASAAATYAVIKYL--G---REGYRKIVAECMENTRYLVEELK-KIGF---EPVIEPVLNIVA 321 (373)
T ss_pred CcccCCCCCcceEeechhHHHHHHHHHHHHh--C---HHHHHHHHHHHHHHHHHHHHHHH-hCCC---eEEcCCCceEEE
Confidence 010000 00 012222222223333210 0 23467788999999999999999 8863 123344444333
Q ss_pred ecCC-C-HHHHHHHHhcccEEEcCCC-----cEEEccC-ChhhHHHHHHHHHH
Q 012628 409 FTGL-N-KAQSDNMTNKWHVYMTKDG-----RISLAGL-SLAKCEYLADAIID 453 (459)
Q Consensus 409 ~~~l-~-~~~~~~ll~~~gI~v~~gg-----Ris~~~~-~~e~i~~~~~~l~~ 453 (459)
+.+ + .++.++|.+ +||.+..+. ||++... +++++++++++|++
T Consensus 322 -~~~~~~~~v~~~L~~-~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 322 -FEVDDPEEVRKKLRD-RGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -EEeCCHHHHHHHHHH-CCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 332 2 344556655 599997752 9998754 88999999999975
No 174
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=5.5e-22 Score=196.66 Aligned_cols=328 Identities=12% Similarity=0.083 Sum_probs=214.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~gg 160 (459)
+...+|+..|.. ...... .|++.+++.+.++.. ..+ +..-..++++.+++.+... ++ .+++ +++|
T Consensus 28 g~~~lD~~s~~~--~~~lG~-~p~v~~a~~~~~~~~--~~~-~~~~~~~~~~~la~~l~~~------~~~~~~~--~~SG 93 (375)
T PRK04260 28 GKKYLDFSSGIG--VTNLGF-HPQVQQALQKQAGLI--WHS-PNLYLNSLQEEVAQKLIGD------KDYLAFF--CNSG 93 (375)
T ss_pred CCEEEECCCCcc--cccCCC-CHHHHHHHHHHHHhc--Ccc-cCccCCHHHHHHHHHHhcC------cCCEEEE--cCcc
Confidence 346889887742 112333 677999999888642 122 2223457888999876442 23 3567 8999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchH-HHhhhCCCC---------eeeeeeecCCCCCCCHHHHHHHHHcCCCCc
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARVP---------WSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~-~~~~~~G~~---------v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 230 (459)
++++..+.++.....++++|++.+.+|.+.. ..+...|.+ +..++.. ...|++.+++.+.+ +.
T Consensus 94 seA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~dl~~l~~~l~~---~~ 166 (375)
T PRK04260 94 AEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA----IFNDLNSVKALVNK---NT 166 (375)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe----CCCCHHHHHHhcCC---Ce
Confidence 9999999777665667788999999887532 222222211 1112211 12488999988754 66
Q ss_pred EEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC
Q 012628 231 FILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 231 ~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (459)
.++++.+++|++|.+. +.+.+++|.++|+++|+++|+||+|.+++..+ ..+... .....+++ .||||.++ +
T Consensus 167 a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g---~~~~~~-~~~~~pdi---~t~sK~l~-~ 238 (375)
T PRK04260 167 AAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG---KLYAFE-HYGIEPDI---FTLAKGLA-N 238 (375)
T ss_pred EEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhhH-hhCCCCCE---EEeccccc-C
Confidence 7888899999999875 46779999999999999999999998876432 122211 12223443 38999999 8
Q ss_pred CCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012628 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 389 (459)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 389 (459)
|+|+||+++ +++. .+.+.......+.+.+.+++.++...|+.... .+.+++.++..+..++.+.+.+.
T Consensus 239 G~~ig~~~~---~~~~----~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~- 306 (375)
T PRK04260 239 GVPVGAMLA---KSSL----GGAFGYGSHGSTFGGNKLSMAAASATLDIMLT----AGFLEQALENGNYLQEQLQKALQ- 306 (375)
T ss_pred CcceEEEEE---cHHH----HhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHh-
Confidence 999999976 7774 33333222222335566677777666643221 13356667777777777777776
Q ss_pred ccCCCCCcccccCCcceeeecCC--CH-HHHHHHHhcccEEEcCCC----cEEE-ccCChhhHHHHHHHHHHHH
Q 012628 390 KDKSGKDWSFILRQIGMFSFTGL--NK-AQSDNMTNKWHVYMTKDG----RISL-AGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 390 ~~g~~~~~~~~~~~~g~f~~~~l--~~-~~~~~ll~~~gI~v~~gg----Ris~-~~~~~e~i~~~~~~l~~~~ 455 (459)
+.+. +..+. ..|+++|+.+ +. ++.+++.+ +||.+.+.+ ||++ ...+++++++++++|++++
T Consensus 307 ~~~~---~~~~~-~~g~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 307 DKET---VTTVR-GLGYMIGIETTADLSQLVEAARD-KGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred hCCC---eeEEe-ccceEEEEEecCcHHHHHHHHHh-CCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 5531 22222 3688888864 33 44555555 699998875 8887 4558999999999998753
No 175
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.91 E-value=1.8e-22 Score=204.92 Aligned_cols=318 Identities=14% Similarity=0.086 Sum_probs=200.5
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCC-----CcccHHHHHHHHHHH---hcCCCCccccCceEEe
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELL---FGADNSVLKEQRVATV 155 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~aia~~l---~~~~~~~~~~~~i~~~ 155 (459)
.+++++.|.| .+. ++..+.++..... . ...|.| ..| .+++++++. ....|.+ ++++.+
T Consensus 69 ~~~~lg~g~~----~~~-~p~~~~~~~~~~~--~-~~~y~~~~~~~~~g---~~~~~~e~~~~la~l~g~~--~~~v~~- 134 (447)
T PRK00451 69 YPSFLGAGAY----DHY-IPAVVDHIISRSE--F-YTAYTPYQPEISQG---TLQAIFEYQTMICELTGMD--VANASM- 134 (447)
T ss_pred CcccCccccc----CCc-CcHHHHHHHhchh--H-HHhcCCCCCccchH---HHHHHHHHHHHHHHHhCCC--cceEEe-
Confidence 5778898887 333 2555554443221 1 123544 333 444444222 3333332 567888
Q ss_pred ecccchhHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHhhh----CCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCc
Q 012628 156 QGLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~----~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 230 (459)
|+|||++++.+ +.+. +.+||+|++++|.|+.+...++. .|++++.+|++ ++ .+|++++++++++ ++
T Consensus 135 -~~g~t~~~~~~--~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~--~~-~~d~~~l~~~i~~---~t 205 (447)
T PRK00451 135 -YDGATALAEAA--LMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE--DG-VTDLEALEAAVDD---DT 205 (447)
T ss_pred -cCcHHHHHHHH--HHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC--CC-CCCHHHHHHhcCC---Ce
Confidence 99999988877 3333 36899999999999988877664 69999999984 34 8999999999975 78
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE--eccCCCCCCCCCCCChhHHHHHHhcCCeEEEEE---cCCcC
Q 012628 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF--DVAYQGFASGSLDNDASSVRLFATRGMELLVAQ---SYSKN 305 (459)
Q Consensus 231 ~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~--Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---S~SK~ 305 (459)
+++++++| ||||.+ +++++|+++|+++|+++++ |.+..++... ....+.++++. +|||.
T Consensus 206 ~~v~l~~p-n~tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g~~~~------------~~~~~~D~~~~s~~k~~~~ 269 (447)
T PRK00451 206 AAVVVQYP-NFFGVI---EDLEEIAEIAHAGGALFIVGVDPVSLGLLKP------------PGEYGADIVVGEGQPLGIP 269 (447)
T ss_pred EEEEEECC-CCCCee---CCHHHHHHHHHHCCCEEEEEcChHHhccCCC------------cccCCCCEEEECCCcCCCC
Confidence 88888899 899999 7799999999999999998 5442211100 01223345554 78888
Q ss_pred cccCCCCcceEEEEeCChhHHHHHHH------------------------HHHhhccccccCCchHHH-HHHHHHhCChh
Q 012628 306 LGLYAERIGAMNVVCSSSDLAARVKS------------------------QLKRLARPMYSNPPVHGA-RIVANVVGNPA 360 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~-~~~~~~L~~~~ 360 (459)
+.+.|+|+||+++ +++..+.+.. ..+........+.+...+ .++...+..
T Consensus 270 ~~~~Gpg~G~l~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~-- 344 (447)
T PRK00451 270 LSFGGPYLGFFAT---RKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSL-- 344 (447)
T ss_pred CCCCCCCchHHHh---hHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHH--
Confidence 8889999999966 6664443200 001111111112222222 222211110
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeee--cC--CC-HHHHHHHHhcccEEE-cCC---
Q 012628 361 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF--TG--LN-KAQSDNMTNKWHVYM-TKD--- 431 (459)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~--~~--l~-~~~~~~ll~~~gI~v-~~g--- 431 (459)
+. .+.++++.+++.++++++.+.|+ +++. +++. ++++|.+ +. .+ .++.++|+++ ||.. .++
T Consensus 345 ~~---~~g~~~~~~~~~~~~~~l~~~L~-~~~g---~~~~--~~~~~~~~~v~~~~~~~~~~~~L~~~-gi~~~~~~~~~ 414 (447)
T PRK00451 345 LG---PEGLRELAEQNHQKAHYLAERLA-EIGG---VELF--DGPFFNEFVVRLPKPAEEVNEALLEK-GILGGYDLGRY 414 (447)
T ss_pred HC---HHHHHHHHHHHHHHHHHHHHHHh-hcCC---EEec--CCCeEEEEEEecCCCHHHHHHHHHhc-CCCCCcccccc
Confidence 00 23468889999999999999999 8741 4544 4455533 33 23 4557777765 6642 111
Q ss_pred -----C--cEEEccC-ChhhHHHHHHHHHHHH
Q 012628 432 -----G--RISLAGL-SLAKCEYLADAIIDSY 455 (459)
Q Consensus 432 -----g--Ris~~~~-~~e~i~~~~~~l~~~~ 455 (459)
+ |+|++.. +++++++++++|++++
T Consensus 415 ~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 415 YPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred cCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 2 8888643 8899999999998764
No 176
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.91 E-value=2.3e-22 Score=201.03 Aligned_cols=336 Identities=14% Similarity=0.048 Sum_probs=211.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-+.-+.. +|.|.+++.+.+.... ...| ......++.+.++++. + .+.+++ +++
T Consensus 38 G~~~lD~~~g~~~~~lGh~--~p~v~~A~~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~----~----~~~v~~--~~s 104 (406)
T PRK12381 38 GKEYIDFAGGIAVNALGHA--HPALREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT----F----ADRVFF--CNS 104 (406)
T ss_pred CCEEEEcCcCHhhccCCCC--CHHHHHHHHHHHhhcccccCcc-CCHHHHHHHHHHHhhC----C----CCeEEE--cCC
Confidence 3568899887543344554 7889999988875421 1122 1222345666666552 1 368888 999
Q ss_pred chhHHHHHHHHHHHhC------CCCEEEEcCCCCcchHHHhhhCCCCee----eeeeec--CCCCCCCHHHHHHHHHcCC
Q 012628 160 GTGSLRLAAALIERYF------PGAKVLISSPTWGNHKNIFNDARVPWS----EYRYYD--PKTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~------~gd~Vlv~~p~y~~~~~~~~~~G~~v~----~v~~~~--~~~~~~d~e~l~~~i~~~~ 227 (459)
|++|++.+.++..... ++.+|+..+.+|.+........+.... ..|+.+ ......|++.+++.+++
T Consensus 105 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-- 182 (406)
T PRK12381 105 GAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD-- 182 (406)
T ss_pred cHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC--
Confidence 9999999988876552 457899999999876543322222110 001100 00112478999988864
Q ss_pred CCcEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC
Q 012628 228 GGSFILLHGCAHNPTGIDP--TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~~--s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (459)
+++++++ .|.||+|-++ +++.+++|.++|++||+++|+||+|.+++..+ ..+.... ....+++ .||||.
T Consensus 183 -~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G---~~~~~~~-~~v~pDi---~t~sK~ 253 (406)
T PRK12381 183 -QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMH-YGVTPDV---LTTAKA 253 (406)
T ss_pred -CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc---chhhhHh-hCCCCCE---EEehhh
Confidence 5666665 6899998754 78999999999999999999999998886543 1222111 1222333 499999
Q ss_pred cccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
++ +|+|+||+++ +++ +.+.+.......+.+.+.+++.++...|+- . . -+..+++++++.+++.+
T Consensus 254 l~-gG~~ig~~~~---~~~----~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~---l---~--~~~~~~~~~~~~~~l~~ 317 (406)
T PRK12381 254 LG-GGFPIGAMLT---TEK----CASVMTVGTHGTTYGGNPLASAVAGKVLEL---I---N--TPEMLNGVKQRHDWFVE 317 (406)
T ss_pred hh-CCCceEEEEE---cHH----HHhhcCCCCCCCCCCCCHHHHHHHHHHHHH---H---h--hccHHHHHHHHHHHHHH
Confidence 99 8999999976 777 444443322233335556666666554421 1 0 13567888888888888
Q ss_pred HHhhccCCCCCcccccCCcceeeecCCC------HHHHHHHHhcccEEEcCCC----cEEEcc-CChhhHHHHHHHHHHH
Q 012628 386 SLSAKDKSGKDWSFILRQIGMFSFTGLN------KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDS 454 (459)
Q Consensus 386 ~L~~~~g~~~~~~~~~~~~g~f~~~~l~------~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~e~i~~~~~~l~~~ 454 (459)
.|+ +++....+.......|+++++.+. ...+...+.++||.+.+.| ||+++. .+++++++++++|.++
T Consensus 318 ~L~-~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~ 396 (406)
T PRK12381 318 RLN-TINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFARA 396 (406)
T ss_pred HHH-HHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 888 653111111112233566555432 1233344444699998755 887764 4999999999999999
Q ss_pred Hhhc
Q 012628 455 YHNV 458 (459)
Q Consensus 455 ~~~~ 458 (459)
++++
T Consensus 397 l~~~ 400 (406)
T PRK12381 397 CERF 400 (406)
T ss_pred HHHH
Confidence 8765
No 177
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.91 E-value=3.2e-23 Score=197.43 Aligned_cols=201 Identities=14% Similarity=0.058 Sum_probs=161.1
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhc----CC-C-CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER----GE-N-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----~~-~-~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
.+.+.|..+ .+++.++.|.+++...+.. .+ . +.|.+..+.++.|+.+|++++++ +++|+|
T Consensus 42 ~~~vyld~~------at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd------~~dIiF-- 107 (428)
T KOG1549|consen 42 TRPVYLDNQ------ATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD------PSDIVF-- 107 (428)
T ss_pred CccEEEecC------cCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC------CCcEEE--
Confidence 355555544 4566799999999988743 11 1 34445667899999999999887 677999
Q ss_pred cccchhHHHHHHHHHHHhCCCC----EEEEcCCCCcchHHHh---hhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCC
Q 012628 157 GLSGTGSLRLAAALIERYFPGA----KVLISSPTWGNHKNIF---NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd----~Vlv~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 229 (459)
|+|+|++++++.+-+. +..+| +|++..-.|......+ +..|++++++|+. +++.+|.+.+++.|++ +
T Consensus 108 ts~ATEs~Nlvl~~v~-~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~---~ 181 (428)
T KOG1549|consen 108 TSGATESNNLVLKGVA-RFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRS---K 181 (428)
T ss_pred eCCchHHHHHHHHHhh-ccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCC---C
Confidence 9999999999955543 23556 8888887777665544 4579999999994 5678999999999997 8
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (459)
|+++.+...+|.+|++ .+++||+++|+++++++++|.| |..+.- +-.+.+.+-+++..|.+|.||++
T Consensus 182 T~lv~I~~Vnn~~gv~---~Pv~EI~~icr~~~v~v~~DaA-QavG~i---------~vDV~eln~D~~s~s~HK~ygp~ 248 (428)
T KOG1549|consen 182 TRLVSIMHVNNEIGVL---QPVKEIVKICREEGVQVHVDAA-QAVGKI---------PVDVQELNADFLSISAHKIYGPP 248 (428)
T ss_pred ceEEEEEecccCcccc---ccHHHHHHHhCcCCcEEEeehh-hhcCCc---------cccHHHcCchheeeecccccCCC
Confidence 9999999999999999 8888999999999999999999 777632 22345667788999999999999
Q ss_pred CCCcceEEE
Q 012628 310 AERIGAMNV 318 (459)
Q Consensus 310 G~RiG~~~~ 318 (459)
| +|++++
T Consensus 249 ~--iGaLYv 255 (428)
T KOG1549|consen 249 G--IGALYV 255 (428)
T ss_pred c--ceEEEE
Confidence 9 999987
No 178
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=1.5e-21 Score=194.10 Aligned_cols=216 Identities=16% Similarity=0.088 Sum_probs=152.5
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----hhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~G~ 199 (459)
+..+..+|++++|++... +++++ ++||++++.++ +...+.+||+|+++.|.|..+... ++..|+
T Consensus 62 ~~p~~~~Le~~iA~~~g~--------~~~l~--~~sG~~Ai~~a--l~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 129 (400)
T PRK06234 62 GNPTSTEVENKLALLEGG--------EAAVV--AASGMGAISSS--LWSALKAGDHVVASDTLYGCTFALLNHGLTRYGV 129 (400)
T ss_pred CCccHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHhhCCe
Confidence 788899999999999753 24556 79999999887 455678999999999988765443 467899
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CCeeEEeccCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASG 277 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~--~~~ii~Deay~~~~~~ 277 (459)
+++.++. .|++++++++++ +++++++++|+||||.+. ++++|+++|+++ |+++|+|++|......
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~~---~tklI~iesP~NPtG~v~---dl~~I~~la~~~~~~i~livDea~~~~~~~ 196 (400)
T PRK06234 130 EVTFVDT-------SNLEEVRNALKA---NTKVVYLETPANPTLKVT---DIKAISNIAHENNKECLVFVDNTFCTPYIQ 196 (400)
T ss_pred EEEEECC-------CCHHHHHHHhcc---CCeEEEEECCCCCCCCcC---CHHHHHHHHHhcCCCCEEEEECCCCchhcC
Confidence 9888875 278999999976 788999999999999995 477888999986 9999999998766432
Q ss_pred CCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCc-ceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHh
Q 012628 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV 356 (459)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 356 (459)
. .+ ..+.++++.|+||.++.+|+|+ ||+++ +++.++++....... ......+...+..+..-|
T Consensus 197 ~------~l-----~~g~Divv~S~sK~l~g~g~~~gG~v~~---~~~~~~~l~~~~~~~--~~g~~l~p~~a~l~~~~l 260 (400)
T PRK06234 197 R------PL-----QLGADVVVHSATKYLNGHGDVIAGFVVG---KEEFINQVKLFGIKD--MTGSVIGPFEAFLIIRGM 260 (400)
T ss_pred C------ch-----hhCCcEEEeeccccccCCCCceeEEEEe---cHHHHHHHHHHHHHH--hcCCCCCHHHHHHHHhcc
Confidence 1 11 1135689999999999899887 88755 677555554321111 111233333333333333
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 357 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
+. +....++..++...+.+.|+ +.
T Consensus 261 ~t----------l~~r~~~~~~na~~~a~~L~-~~ 284 (400)
T PRK06234 261 KT----------LQIRMEKHCKNAMKVAKFLE-SH 284 (400)
T ss_pred Cc----------HHHHHHHHHHHHHHHHHHHH-cC
Confidence 32 23444445566666777776 54
No 179
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=7.1e-22 Score=198.75 Aligned_cols=324 Identities=16% Similarity=0.181 Sum_probs=197.1
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCC------CCcccHHH----HHHHHHHHhcCCCCccccCce
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAF----NKVTAELLFGADNSVLKEQRV 152 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~l----r~aia~~l~~~~~~~~~~~~i 152 (459)
.+.++|..++. + +++.|++++...+.......++ ...-...+ |+.++++++.. ..+|
T Consensus 25 ~~~~~l~~~~n------~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~------~~~i 91 (416)
T PRK00011 25 EEHIELIASEN------F-VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAE------YANV 91 (416)
T ss_pred hcCeeeecccC------c-CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC------ceee
Confidence 57799998764 3 4889999987664221100110 11112223 33556665432 3445
Q ss_pred EEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-----HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC
Q 012628 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-----IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 153 ~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~-----~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~ 227 (459)
++ + +|+.++..+ +...+.+||+|+++.|+|..+.. .+...|++++.++++ .+++.+|++++++.+++
T Consensus 92 ~~--~-sgt~al~~~--l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~-- 163 (416)
T PRK00011 92 QP--H-SGSQANAAV--YFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVD-EETGLIDYDEVEKLALE-- 163 (416)
T ss_pred ec--C-CchHHHHHH--HHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcC-cccCCcCHHHHHHHHHh--
Confidence 54 4 568888887 34446799999999999976532 123456788888874 24578999999999975
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC-CCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc
Q 012628 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (459)
.+++++++++++|| .. .++++|+++|+++|+++|+|++|.. +.+.+. .. ..+. ..+++++|+||.+
T Consensus 164 ~~~k~v~~~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~---~~---~~~~--~~di~~~S~~K~l 230 (416)
T PRK00011 164 HKPKLIIAGASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGV---HP---SPVP--HADVVTTTTHKTL 230 (416)
T ss_pred cCCCEEEECCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCc---cC---CCCC--CCcEEEecCCcCC
Confidence 24667776655554 44 5688999999999999999999642 221110 00 0011 2357799999976
Q ss_pred ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 386 (459)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (459)
+|+|.||+++ .+++..+.+...... ....++....+.++...+. ... .+.+++.+++++++++++.+.
T Consensus 231 --~g~~gg~i~~--~~~~~~~~l~~~~~~---~~~~~~~~~~~aa~~~a~~--~~~---~~~~~~~~~~~~~~~~~l~~~ 298 (416)
T PRK00011 231 --RGPRGGLILT--NDEELAKKINSAVFP---GIQGGPLMHVIAAKAVAFK--EAL---EPEFKEYAQQVVKNAKALAEA 298 (416)
T ss_pred --CCCCceEEEe--CCHHHHHHHHHHhCc---cccCCccHHHHHHHHHHHH--HHH---hhhHHHHHHHHHHHHHHHHHH
Confidence 6888999844 445644444332211 1121222212111111111 111 123577888999999999999
Q ss_pred HhhccCCCCCccccc-CCcceeeecCC-----CHHHHHHHHhcccEEEcCC-------------C-cEEE-----ccCCh
Q 012628 387 LSAKDKSGKDWSFIL-RQIGMFSFTGL-----NKAQSDNMTNKWHVYMTKD-------------G-RISL-----AGLSL 441 (459)
Q Consensus 387 L~~~~g~~~~~~~~~-~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~~g-------------g-Ris~-----~~~~~ 441 (459)
|+ ++| +++.. ...++++|+.+ +.+.+...++++||.+..+ + |++. .++++
T Consensus 299 L~-~~g----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~ 373 (416)
T PRK00011 299 LA-ERG----FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKE 373 (416)
T ss_pred HH-hCC----CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCH
Confidence 99 876 44432 11236666644 3444555556679998731 2 7743 13478
Q ss_pred hhHHHHHHHHHHHHhh
Q 012628 442 AKCEYLADAIIDSYHN 457 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~ 457 (459)
+++++++++|+++++.
T Consensus 374 ~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 374 AEMKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988764
No 180
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.91 E-value=1.1e-21 Score=193.32 Aligned_cols=274 Identities=14% Similarity=0.156 Sum_probs=187.1
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~G~ 199 (459)
+.....+|++++|++.... . .++ ++||++++.++ +..+.+||+|++++|+|+.. ...++..|+
T Consensus 50 ~~pt~~~le~~la~l~g~~-------~-~~~--~~sG~~ai~~~---~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 116 (366)
T PRK08247 50 GNPTRGVLEQAIADLEGGD-------Q-GFA--CSSGMAAIQLV---MSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNV 116 (366)
T ss_pred CCchHHHHHHHHHHHhCCC-------c-EEE--EcCHHHHHHHH---HHHhCCCCEEEEecCCcCcHHHHHHHHhhccCc
Confidence 4556789999999996543 2 344 68889999876 34567999999999999864 445566899
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++. .|++.+++++++ +++++++++|+||+|.. .++++|+++|+++|+++|+|++|.......
T Consensus 117 ~v~~vd~-------~d~~~l~~~i~~---~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~~- 182 (366)
T PRK08247 117 RFVYVNT-------ASLKAIEQAITP---NTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQR- 182 (366)
T ss_pred eEEEECC-------CCHHHHHHhccc---CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccccC-
Confidence 9888865 388999999876 78899999999998776 999999999999999999999984332210
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccC-CCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
++ ....++++.|+||.++.+ +.+.|+++ ++++++.+++... +.......+...|.++...|+.
T Consensus 183 -----p~-----~~g~di~i~S~sK~~~g~~d~~~G~iv--~~~~~l~~~~~~~----~~~~g~~~s~~~a~l~~~~l~t 246 (366)
T PRK08247 183 -----PL-----EEGADIVIHSATKYLGGHNDVLAGLVV--AKGQELCERLAYY----QNAAGAVLSPFDSWLLIRGMKT 246 (366)
T ss_pred -----ch-----hcCCcEEEeecceeccCCCceeeeEEe--cChHHHHHHHHHH----HHhcCCCCChHHHHHHHhccCc
Confidence 11 123579999999999743 46889874 3335544444322 2222223444555555544432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc-c-ccCCcceeeecCC-CHHHHHHHHhc------------
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-F-ILRQIGMFSFTGL-NKAQSDNMTNK------------ 423 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~-~~~~~g~f~~~~l-~~~~~~~ll~~------------ 423 (459)
+....++++++++.+.+.|+ +.+ + +. + .++.||+|.|. + +.+...++++.
T Consensus 247 ----------l~~r~~~~~~~a~~l~~~L~-~~p--~-v~~v~~P~~gg~~sf~-~~~~~~~~~~~~~l~~~~~~~slg~ 311 (366)
T PRK08247 247 ----------LALRMRQHEENAKAIAAFLN-EQP--G-VTDVLYPGRGGMLSFR-LQDEEWVNPFLKSLKLITFAESLGG 311 (366)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-hCC--C-eeEEecCCcCcEEEEE-ECCHHHHHHHHHcCCcceEccCCCC
Confidence 34455567889999999999 763 1 33 3 34489999884 3 23333333331
Q ss_pred -ccEEEcCC---------------C------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 424 -WHVYMTKD---------------G------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 424 -~gI~v~~g---------------g------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
..+.+.|+ | |||++- |+++.+++-|.++++.+
T Consensus 312 ~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 312 VESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQV 365 (366)
T ss_pred CceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhhc
Confidence 23344443 2 889865 67888888888888754
No 181
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.90 E-value=1.4e-21 Score=193.95 Aligned_cols=329 Identities=12% Similarity=0.080 Sum_probs=201.4
Q ss_pred eeecccccCCCCCCccCcHHHHHHHHHHhhc-------CCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLER-------GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 86 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-------~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+||+...|+ +... .|+++++..+.+++ .. ..|+...+..+|++++|+++.. ++.+++ ++
T Consensus 1 ~~f~s~dyL---gl~~-~~~~~~~~~~a~~~~g~~~~~sr-~~yg~~~~~~~LE~~lA~~~g~-------e~al~~--~s 66 (392)
T PLN03227 1 LNFATHDFL---STSS-SPTLRQTALESLSHYGCGSCGPR-GFYGTIDAHLELEQCMAEFLGT-------ESAILY--SD 66 (392)
T ss_pred CCCcCcCcc---CCCC-CHHHHHHHHHHHHHhCCCCcccc-cccCChHHHHHHHHHHHHHhCC-------CcEEEe--cC
Confidence 356666554 3332 67888888887754 12 3377777899999999999754 355766 55
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC--------CCCc
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--------PGGS 230 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~--------~~~~ 230 (459)
|.+... .+ +...+.+||.|+++++.|..+...+...+++++.++..+ .-|++.+.+.+... .+++
T Consensus 67 G~~a~~-~~--i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d----~~~l~~~~~~i~~~~~a~~~~~~~~t 139 (392)
T PLN03227 67 GASTTS-ST--VAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND----MKDLRRVLEQVRAQDVALKRKPTDQR 139 (392)
T ss_pred cHHHHH-HH--HHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC----HHHHHHHHHHhhhhccccccccCCCc
Confidence 555554 44 344578999999999999998887777788777776631 12445555555421 1367
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH-H-hcCCeEEEEEcCCcCccc
Q 012628 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-A-TRGMELLVAQSYSKNLGL 308 (459)
Q Consensus 231 ~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~~S~SK~~~~ 308 (459)
+++++.+++||+|.+.+ +++|.++|++||+++|+||+|. ++..+.. .......+ + ...+.++++.|+||.+|+
T Consensus 140 ~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~-~g~~g~~-G~g~~~~~g~~p~~~~Div~~slsk~~g~ 214 (392)
T PLN03227 140 RFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS-FGTLGKS-GRGSLEHAGLKPMVHAEIVTFSLENAFGS 214 (392)
T ss_pred EEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-ccccCCC-CCcHHHHcCCCCCCCceEEEeechhhhhc
Confidence 88889999999999965 7789999999999999999986 4432111 11122111 1 112347888999998764
Q ss_pred CCCCcceEEEEeCChhHHHHHHHHHHhhcccccc-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 309 YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSL 387 (459)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 387 (459)
. .|++.+ +++.++.+.. ......++ +.+...+.++...+... ...++..++++++.+++.+.|
T Consensus 215 ~---gg~v~~---~~~~~~~~~~---~~~~~~~~~~~~p~~~~aa~~al~~~-------~~~~~~~~~l~~~~~~l~~~L 278 (392)
T PLN03227 215 V---GGMTVG---SEEVVDHQRL---SGSGYCFSASAPPFLAKADATATAGE-------LAGPQLLNRLHDSIANLYSTL 278 (392)
T ss_pred c---CcEEec---CHHHHHHHHH---hCcCccccCCCCHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHH
Confidence 3 477644 7774433321 11112222 22333334443222211 001356778888899999999
Q ss_pred hhccCCCC------CcccccCCcceeeecCCC--------------HHHHHHHHhcccEEEcCC-------------C--
Q 012628 388 SAKDKSGK------DWSFILRQIGMFSFTGLN--------------KAQSDNMTNKWHVYMTKD-------------G-- 432 (459)
Q Consensus 388 ~~~~g~~~------~~~~~~~~~g~f~~~~l~--------------~~~~~~ll~~~gI~v~~g-------------g-- 432 (459)
+ +.+.|. .........+.++.+.+. .++.+.+++ +||.+.+. .
T Consensus 279 ~-~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gi~~~~~~~~~~~~~~~~P~~~i 356 (392)
T PLN03227 279 T-NSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLS-EGVAVVSTGGHVKKFLQLVPPPCL 356 (392)
T ss_pred H-hcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHH-CCCEEEecccccCCcCCCCCCceE
Confidence 8 654321 000001111222222221 134556665 59987531 1
Q ss_pred cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 433 RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 433 Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
|+++.. .|+||+++++++|+++++++
T Consensus 357 R~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 357 RVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 888764 39999999999999998763
No 182
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=1.3e-22 Score=199.76 Aligned_cols=291 Identities=15% Similarity=0.092 Sum_probs=189.5
Q ss_pred CCCCCCccCcHHHHHHHHHHhhcCCC--CCCCCC------cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHH
Q 012628 94 RTEELQPYVLDVVKKAENLMLERGEN--KEYLPI------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLR 165 (459)
Q Consensus 94 ~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~------~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~ 165 (459)
+|..+..++++.+.+++.+.+..... ..+... .-++++|+.+++++... +++|++ |+|+|++++
T Consensus 2 ld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--~~g~t~a~~ 73 (353)
T TIGR03235 2 LDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGAD------TEEVIF--TSGATESNN 73 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHHHH
Confidence 45666666789999999888743110 111111 12568889999987543 678999 999999999
Q ss_pred HHHHHHHHh--CCC-CEEEEcCCCCcchHH---HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 166 LAAALIERY--FPG-AKVLISSPTWGNHKN---IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 166 l~~~~~~~~--~~g-d~Vlv~~p~y~~~~~---~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
++...+... .+| +.|++....|+.+.. .++..|++++.+|++ +++.+|++++++.+++ +++++++++++
T Consensus 74 ~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~---~~~lv~~~~~~ 148 (353)
T TIGR03235 74 LAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVD--ESGRIDVDELADAIRP---DTLLVSIMHVN 148 (353)
T ss_pred HHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhCCC---CCEEEEEEccc
Confidence 874433221 256 778888766665433 345679999999984 4577999999999875 67889899999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (459)
||||.++ ++++|+++|+++|+++++|++ +.++....+ ....+.++++.|++|.+|++| +|++++
T Consensus 149 n~tG~~~---~~~~I~~l~~~~~~~~ivD~a-~~~g~~~~~---------~~~~~~D~~~~s~~K~~gp~g--~g~l~~- 212 (353)
T TIGR03235 149 NETGSIQ---PIREIAEVLEAHEAFFHVDAA-QVVGKITVD---------LSADRIDLISCSGHKIYGPKG--IGALVI- 212 (353)
T ss_pred CCceecc---CHHHHHHHHHHcCCEEEEEch-hhcCCcccc---------ccccCCCEEEeehhhcCCCCc--eEEEEE-
Confidence 9999995 478899999999999999999 444432111 122345677889999998777 799865
Q ss_pred eCChhHHHHHHHHHHhh---------ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012628 320 CSSSDLAARVKSQLKRL---------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 390 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 390 (459)
+++..... ..... ....+.+++.+.+ ....++ + +.+.+++.+++++++++++++.|+ +
T Consensus 213 --~~~~~~~~--~~~~~~~~~~~~~~~~~gt~~~~~~~a--l~~al~---~---~~~~~~~~~~~~~~l~~~l~~~l~-~ 279 (353)
T TIGR03235 213 --RKRGKPKA--PLKPIMFGGGQERGLRPGTLPVHLIVG--MGEAAE---I---ARRNAQAWEVKLRAMRNQLRDALQ-T 279 (353)
T ss_pred --ccCccccc--ccCceeeCCCCcCccccCCCChHHHHH--HHHHHH---H---HHhhHHHHHHHHHHHHHHHHHHhc-c
Confidence 43321110 01100 0111122223222 222221 1 123467888999999999999998 7
Q ss_pred cCCCCCcccccCC----ccee--eecCCCHHHHHHHHhcccEEEcCC
Q 012628 391 DKSGKDWSFILRQ----IGMF--SFTGLNKAQSDNMTNKWHVYMTKD 431 (459)
Q Consensus 391 ~g~~~~~~~~~~~----~g~f--~~~~l~~~~~~~ll~~~gI~v~~g 431 (459)
.| +++..+. .++. ...+.+.+.+...|++ +|.+.+|
T Consensus 280 ~g----~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 280 LG----VKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred CC----eEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEEch
Confidence 76 4544221 1222 2245666676666665 8999887
No 183
>PLN02651 cysteine desulfurase
Probab=99.90 E-value=2.5e-22 Score=198.43 Aligned_cols=296 Identities=15% Similarity=0.073 Sum_probs=189.1
Q ss_pred cCCCCCCccCcHHHHHHHHHHhhcCCCCC------CCC--CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHH
Q 012628 93 YRTEELQPYVLDVVKKAENLMLERGENKE------YLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSL 164 (459)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~--~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~ 164 (459)
|+|..+..++++.+.+++.+.+....... +.. ..-++++|+.+++++... +++|++ |+|+|+++
T Consensus 2 Yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~------~~~v~~--t~~~t~a~ 73 (364)
T PLN02651 2 YLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGAD------PKEIIF--TSGATESN 73 (364)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCC------CCeEEE--eCCHHHHH
Confidence 56666666778999999988774311111 111 122567788888887543 678999 99999999
Q ss_pred HHHHHHHHH--hCCCCEEEEcCCCCcchHHH---hhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 165 RLAAALIER--YFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 165 ~l~~~~~~~--~~~gd~Vlv~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
+++...+.. ..+||+|+++...|+.+... ++..|++++.+|++ +++.+|++.+++++++ +++++++++++
T Consensus 74 ~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~---~t~lv~v~~~~ 148 (364)
T PLN02651 74 NLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRP---DTALVSVMAVN 148 (364)
T ss_pred HHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCC---CcEEEEEECCC
Confidence 887444322 35899999999777655433 34578999999883 4577999999999976 78899999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVV 319 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v 319 (459)
||||.+ .++++|+++|+++|+++++|.+ +.++.-+.+ +...+.++++.|.+|.+|++| +|++++
T Consensus 149 n~tG~~---~~l~~I~~~~~~~g~~~~vD~a-~~~g~~~~~---------~~~~~~D~~~~s~hK~~gp~G--~g~l~v- 212 (364)
T PLN02651 149 NEIGVI---QPVEEIGELCREKKVLFHTDAA-QAVGKIPVD---------VDDLGVDLMSISGHKIYGPKG--VGALYV- 212 (364)
T ss_pred CCceec---ccHHHHHHHHHHcCCEEEEEcc-hhhCCcccC---------cccCCCCEEEechhhhCCCCc--eEEEEE-
Confidence 999999 5678899999999999999999 444432221 223346788899999877666 799866
Q ss_pred eCChhHHHHHHHHHHh--h-ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 012628 320 CSSSDLAARVKSQLKR--L-ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKD 396 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 396 (459)
+++....+...... . ......+++..+...+...|+ + +.+..++++++.+++++++.+.|+ +. +| +
T Consensus 213 --~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~---~---~~~~~~~i~~~~~~l~~~l~~~l~-~~-~~-~ 281 (364)
T PLN02651 213 --RRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACE---L---AMKEMDYDEKHMKALRERLLNGLR-AK-LG-G 281 (364)
T ss_pred --cCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHH---H---HHHhHHHHHHHHHHHHHHHHHHHH-hh-CC-C
Confidence 44322222111100 0 001122333333333333322 1 123356778888999999999887 53 11 1
Q ss_pred cccccC---C---ccee--eecCCCHHHHHHHHhcccEEEcC
Q 012628 397 WSFILR---Q---IGMF--SFTGLNKAQSDNMTNKWHVYMTK 430 (459)
Q Consensus 397 ~~~~~~---~---~g~f--~~~~l~~~~~~~ll~~~gI~v~~ 430 (459)
++...+ + .+.. ...+++.+.+...|++ |.+..
T Consensus 282 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~ 321 (364)
T PLN02651 282 VRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSS 321 (364)
T ss_pred EEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEc
Confidence 444432 1 2333 3346666665544453 76643
No 184
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.90 E-value=1.1e-20 Score=189.10 Aligned_cols=328 Identities=11% Similarity=0.071 Sum_probs=208.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+|+..|..-...|. -.|.|.+++.+.++... ...+.......+|.+.++++.. .+++++ +++|
T Consensus 40 g~~~lD~~~~~~~~~~Gh--~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--------~~~~~~--~~SG 107 (401)
T PRK00854 40 GNRYLDCLSAYSAVNQGH--CHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTG--------SHKVLP--MNSG 107 (401)
T ss_pred CCEEEEcCcchhhccCCC--CCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCC--------CCEEEE--eCCc
Confidence 346788877743112222 27889999888876421 1112233445667777777631 246888 8999
Q ss_pred hhHHHHHHHHHHHh-----C--CC-CEEEEcCCCCcchHHHhhhCCC-------------CeeeeeeecCCCCCCCHHHH
Q 012628 161 TGSLRLAAALIERY-----F--PG-AKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGM 219 (459)
Q Consensus 161 t~a~~l~~~~~~~~-----~--~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~v~~v~~~~~~~~~~d~e~l 219 (459)
++|++.+.+++... . +| ++|++.+-+|.+....+...+. .+..+|. .|++.+
T Consensus 108 s~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 180 (401)
T PRK00854 108 AEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEAL 180 (401)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence 99999997776543 1 23 6888888887654322222221 1222222 378999
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012628 220 IADIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (459)
Q Consensus 220 ~~~i~~~~~~~~~ii~~~p~NPTG~~~s~-~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (459)
++.+.+ +++++++++|+||+|.++++ +.+++|.++|++||+++|+||+|.+++..+ ..+.. ......+++++
T Consensus 181 e~~i~~---~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g---~~~~~-~~~g~~~D~~~ 253 (401)
T PRK00854 181 EAAITP---NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTG---KLLAE-EHEGIEADVTL 253 (401)
T ss_pred HHHhCC---CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---hHhHH-hhcCCCCCEEE
Confidence 998875 78899999999999999874 469999999999999999999998776532 11111 11122223332
Q ss_pred EEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
++|.++-..+|+||+++ +++.++ .+.......+.+.+.+++.++...|+.. .+ +...+++++
T Consensus 254 ---~~K~l~gg~~~ig~v~~---~~~~~~----~l~~~~~~~t~~~~~~~~aa~~a~L~~l------~~--~~~~~~~~~ 315 (401)
T PRK00854 254 ---IGKALSGGFYPVSAVLS---NSEVLG----VLKPGQHGSTFGGNPLACAVARAALKVL------TE--EGMIENAAE 315 (401)
T ss_pred ---ecccccCCccCeEEEEE---cHHHHh----cccCCCCCCCCCcCHHHHHHHHHHHHHH------HH--cCHHHHHHH
Confidence 46999843379999866 777443 3332222223345666666666555321 10 235678888
Q ss_pred HHHHHHHHHhhccCCCCCcccccCCcceeeec--CC---CHHHHHHHHhcccEEEcCCC----cEEEc-cCChhhHHHHH
Q 012628 379 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLA 448 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~--~l---~~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~e~i~~~~ 448 (459)
+.+++.+.|+ +++.+. +....+.|.++.+. +- ..++++.|++ +||.+.+.+ |+++. ..++++|++++
T Consensus 316 ~~~~l~~~L~-~~~~~~-~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~-~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i 392 (401)
T PRK00854 316 MGAYFLEGLR-SIRSNI-VREVRGRGLMLAVELEPEAGGARQYCEALKE-RGLLAKDTHDHTIRLAPPLVITREQVDWAL 392 (401)
T ss_pred HHHHHHHHHH-hhccCc-eEEEeccceEEEEEEecCchhHHHHHHHHHH-CCeEEecCCCCEEEEeCCcccCHHHHHHHH
Confidence 8899999998 765211 11234455555442 21 2345667776 599998653 88864 23899999999
Q ss_pred HHHHHHHh
Q 012628 449 DAIIDSYH 456 (459)
Q Consensus 449 ~~l~~~~~ 456 (459)
++|++++.
T Consensus 393 ~~l~~~l~ 400 (401)
T PRK00854 393 EQIAKVLA 400 (401)
T ss_pred HHHHHHhh
Confidence 99998874
No 185
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.89 E-value=8.2e-21 Score=188.25 Aligned_cols=236 Identities=14% Similarity=0.121 Sum_probs=159.2
Q ss_pred cHHHHHHHHHHhhcCCCCCCC--CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEE
Q 012628 103 LDVVKKAENLMLERGENKEYL--PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKV 180 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~--~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~V 180 (459)
.+.+.+++.........+.|+ ...-..+|++.+++++.. +++++ ++||++|+.++ +...+.+||+|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~--------~~~v~--~ssG~~Ai~~a--l~al~~~Gd~V 103 (390)
T PRK08133 36 FESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGA--------EACVA--TASGMAAILAV--VMALLQAGDHV 103 (390)
T ss_pred cCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEE
Confidence 445555554443221112233 334467899999998643 45667 89999999987 44557899999
Q ss_pred EEcCCCCcchH----HHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 012628 181 LISSPTWGNHK----NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (459)
Q Consensus 181 lv~~p~y~~~~----~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~ 256 (459)
+++.+.|.... ..++..|++++.++.+ |++++++++++ +++++++++|+||||.+. ++++|++
T Consensus 104 i~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-------d~~~l~~~i~~---~tklV~ie~p~NptG~v~---dl~~I~~ 170 (390)
T PRK08133 104 VSSRSLFGSTVSLFEKIFARFGIETTFVDLT-------DLDAWRAAVRP---NTKLFFLETPSNPLTELA---DIAALAE 170 (390)
T ss_pred EEccCcchhHHHHHHHHHHHcCcEEEEECCC-------CHHHHHHhcCc---CCeEEEEECCCCCCCCcC---CHHHHHH
Confidence 99999887644 3456789999888762 78899988875 788999999999999994 6788999
Q ss_pred HHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhh
Q 012628 257 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL 336 (459)
Q Consensus 257 l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~ 336 (459)
+|+++|+++|+|++|....... .+ .. ..++++.|+||.++.+|+++|+++ +.+++.++++...+..
T Consensus 171 la~~~gi~livD~t~~~~~~~~------pl----~~-g~Divv~S~sK~~~g~g~~~GG~v--v~~~~~~~~~~~~~~~- 236 (390)
T PRK08133 171 IAHAAGALLVVDNCFCTPALQQ------PL----KL-GADVVIHSATKYLDGQGRVLGGAV--VGSKELMEEVFGFLRT- 236 (390)
T ss_pred HHHHcCCEEEEECCCcccccCC------ch----hh-CCcEEEeecceeecCCcceEeEEE--EcCHHHHHHHHHHHHH-
Confidence 9999999999999986543221 11 11 235789999999998999996653 3366655444433222
Q ss_pred ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 337 ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
.....+...+.. ++..- +.+..+.+++.+++..+.+.|+ +.
T Consensus 237 ---~g~~~~~~~a~~---~l~gl-------~tl~~R~~~~~~~a~~la~~L~-~~ 277 (390)
T PRK08133 237 ---AGPTLSPFNAWV---FLKGL-------ETLSLRMEAHSANALALAEWLE-AH 277 (390)
T ss_pred ---hCCCCCHHHHHH---HHccc-------chHHHHHHHHHHHHHHHHHHHH-hC
Confidence 111233333222 23321 2245556666678888888888 65
No 186
>PLN00144 acetylornithine transaminase
Probab=99.89 E-value=1.7e-20 Score=185.65 Aligned_cols=328 Identities=14% Similarity=0.035 Sum_probs=201.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...+|+..|..-...+.. +|.|.+++.+.++... .+.. ....+....+++.+....+ .+.+.+ +++|+
T Consensus 14 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~--~~~~-~~~~~~~~~la~~l~~~~~----~~~v~f--~~sGs 82 (382)
T PLN00144 14 GKEYLDMAAGIAVNALGHG--DPDWVKAVAEQAGTLA--HVSN-VYHTIPQVELAKRLVASSF----ADRVFF--CNSGT 82 (382)
T ss_pred CCEEEECCcCHHhccCCCC--CHHHHHHHHHHHHhcC--Cccc-cccCHHHHHHHHHHHhcCC----CCeEEE--eCCcH
Confidence 3578888877532223443 7889999988886421 1111 1112223334444332211 357888 99999
Q ss_pred hHHHHHHHHHHHhCC-------------CCEEEEcCCCCcchHHHhhhCCCC-------------eeeeeeecCCCCCCC
Q 012628 162 GSLRLAAALIERYFP-------------GAKVLISSPTWGNHKNIFNDARVP-------------WSEYRYYDPKTVGLD 215 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~-------------gd~Vlv~~p~y~~~~~~~~~~G~~-------------v~~v~~~~~~~~~~d 215 (459)
+|++.+.++...+.. ..+|+....+|.+........... +..+|. .|
T Consensus 83 eA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d 155 (382)
T PLN00144 83 EANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-------GN 155 (382)
T ss_pred HHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-------CC
Confidence 999999888765531 257999998887664332221111 112221 27
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012628 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPT--PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (459)
Q Consensus 216 ~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s--~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (459)
++.+++.+.. ....++++...+|| |.+++ .+.+++|.++|++||+++|+||+|.+++..+ ..+.. .+....
T Consensus 156 ~~~l~~~~~~--~~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g---~~~~~-~~~~~~ 228 (382)
T PLN00144 156 LEAARKLIQK--GKTAAVFVEPVQGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTG---YLWAH-EAYGVE 228 (382)
T ss_pred HHHHHHhcCC--CCeEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hHhhh-hhcCCC
Confidence 8899888853 24445555555999 54444 4449999999999999999999999887542 12221 122223
Q ss_pred CeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHH---HHhCChhhHHHHHHHHH
Q 012628 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEME 370 (459)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~ 370 (459)
++ +.+|||.++ +|+|+||+++ +++..+.+ .......+.+.+.+++.++. .+++++++ .++++
T Consensus 229 PD---i~t~sK~l~-~G~pig~v~~---~~~~~~~~----~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~----~~~~~ 293 (382)
T PLN00144 229 PD---IMTLAKPLA-GGLPIGAVLV---TEKVASAI----NPGDHGSTFAGGPLVCNAALAVLDKISKPGF----LASVA 293 (382)
T ss_pred CC---EEEeccccc-CCcceEEEEE---cHHHHhcc----CCCCCCCCCCCCHHHHHHHHHHHHHHhhchH----HHHHH
Confidence 44 568999999 8999999976 77744333 22222223355556666665 45555443 23344
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC---CHHHHHHHHhcccEEEcCCC-----cEEEcc-CCh
Q 012628 371 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL---NKAQSDNMTNKWHVYMTKDG-----RISLAG-LSL 441 (459)
Q Consensus 371 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l---~~~~~~~ll~~~gI~v~~gg-----Ris~~~-~~~ 441 (459)
++.+.+ ++.+.+.+. +.+. +..+. ..|+++|+.+ ...+.+.+++ +||.+.|++ ||+++. .++
T Consensus 294 ~~g~~l---~~~l~~~~~-~~~~---~~~vr-g~G~~~~l~l~~~~~~~~~~~~~-~Gv~i~~~~~~~~lrl~p~~~~~~ 364 (382)
T PLN00144 294 KKGEYL---RELLRRKLG-GNPH---VKEVR-GVGLLVGIQLDVPAGPLVDACRD-SGLLVLTAGKGDVVRLVPPLVISE 364 (382)
T ss_pred HHHHHH---HHHHHHHHh-hCCC---ceeee-cCceEEEEEecCccHHHHHHHHH-CCeEEeecCCCCEEEEeCCCccCH
Confidence 444444 334444444 4421 11122 3688888865 2345566665 699998864 888876 589
Q ss_pred hhHHHHHHHHHHHHhhc
Q 012628 442 AKCEYLADAIIDSYHNV 458 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~~ 458 (459)
+++++++++|.+++.++
T Consensus 365 ~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 365 AELEQAVEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999865
No 187
>PRK06460 hypothetical protein; Provisional
Probab=99.89 E-value=8.7e-21 Score=187.15 Aligned_cols=214 Identities=14% Similarity=0.057 Sum_probs=145.0
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCC----cchHHHhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW----GNHKNIFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y----~~~~~~~~~~G~ 199 (459)
......+|++++|++.... ..+++ ++|++++..+ +...+.+||+|+++.|.| ..|...++..|+
T Consensus 43 ~~p~~~~L~~~lA~l~g~~-------~~v~~---~sG~~ai~~~--l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~ 110 (376)
T PRK06460 43 ANPTVLELTKKIVELENAE-------MGVAF---SSGMGAISTT--ALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGV 110 (376)
T ss_pred CCccHHHHHHHHHHHhCCC-------cEEEe---CCHHHHHHHH--HHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCc
Confidence 3567789999999997542 34544 6667888887 444578999999998654 455677788899
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++.+ +.+.+++.++ ++++++++++||||||.+++. ++|+++|+++|+++|+|++|......
T Consensus 111 ~v~~~~~~-------~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~~~~-- 175 (376)
T PRK06460 111 NVDASNPG-------SDNIIEKAKS---KRYDVVFVENITNPLLRVVDI---TELSKVCKENGSILIVDATFSTPINQ-- 175 (376)
T ss_pred EEEEECCC-------CHHHHHHhcC---CCceEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcCccccC--
Confidence 98887752 1233443333 378899999999999999765 46888899999999999998754211
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccC-CCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
. . + ..+.++++.|+||.++.. |.|+||+++ +++.++.+..... ....+.+.. .+..++..
T Consensus 176 --~--~---l--~~~~divv~S~sK~l~G~~~~~~G~~~~---~~~l~~~l~~~~~----~~g~~~~~~---~a~~~l~~ 236 (376)
T PRK06460 176 --K--P---L--ELGADIVVHSASKFLAGHNDVIAGLAAG---YGKLLNVIDQMRR----TLGTSLDPH---AAYLTLRG 236 (376)
T ss_pred --C--h---h--hcCCCEEEeecceeccCCCCceEEEEec---CHHHHHHHHHHHH----hcCCCCCHH---HHHHHHhc
Confidence 0 1 1 123568999999998622 367999855 7775555543222 222233332 22333333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
. +.++...+++.++++.+.+.|+ +.
T Consensus 237 ~-------~~l~~r~~~~~~n~~~l~~~L~-~~ 261 (376)
T PRK06460 237 I-------KTLKIRMDVINRNAEQIAEFLE-GH 261 (376)
T ss_pred h-------hhHHHHHHHHHHHHHHHHHHHH-cC
Confidence 2 2256677788889999999998 65
No 188
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.89 E-value=7.4e-21 Score=187.12 Aligned_cols=274 Identities=16% Similarity=0.115 Sum_probs=178.6
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh----hhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~G~ 199 (459)
+.....+|++++|++. . ++.+ + +.+|++++.++ +.+.+.+||+|++++|+|..+...+ +..|+
T Consensus 49 ~~p~~~~Le~~lA~l~-~-------~~~v-~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 49 SNPTWRALEAALGELE-G-------AEAL-V--FPSGMAAITAV--LRALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred CCccHHHHHHHHHHHc-C-------CCEE-E--ECCHHHHHHHH--HHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 6778899999999996 2 3444 4 57778898887 4555789999999999998886644 45799
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++..++ .+ .+. ++++++++++|+||||.+ .++++|+++|+++|+++|+|++|.... + .
T Consensus 116 ~v~~v~~~~~------~~----~~~---~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~~-~-~ 177 (366)
T PRK07582 116 TVREAPTAGM------AE----AAL---AGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATPL-G-Q 177 (366)
T ss_pred EEEEECCCCh------HH----Hhc---cCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCcc-c-c
Confidence 9999887311 11 222 267888889999999988 678899999999999999999985321 1 1
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCc-ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
. .+ + ....++++|+||.+ |.+|+|+||+ ++++++..+++.... ......++...+..+...|..
T Consensus 178 --~--p~----~-~g~Divv~S~sK~l~G~~g~~~G~v--~~~~~~l~~~l~~~~----~~~g~~~~~~~a~l~~r~l~t 242 (366)
T PRK07582 178 --R--PL----E-LGADLVVASDTKALTGHSDLLLGYV--AGRDPELMAAVERWR----LLAGAIPGPFEAWLAHRSLGT 242 (366)
T ss_pred --C--ch----h-cCCcEEEecccccccCCCCeeEEEE--EcCcHHHHHHHHHHH----HHhCCCCCHHHHHHHHhcccc
Confidence 0 11 1 12347889999998 4577999998 445566555444322 222334455555555444443
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc----ccC-----------Ccceeeec-CCCHHHHHHHHh
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF----ILR-----------QIGMFSFT-GLNKAQSDNMTN 422 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~----~~~-----------~~g~f~~~-~l~~~~~~~ll~ 422 (459)
+....++..++...+.+.|+ +.+.-..+.+ -.| .||++.|. + +.+.+.+.++
T Consensus 243 ----------l~~R~~~~~~na~~la~~L~-~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~~~~~ 310 (366)
T PRK07582 243 ----------LGLRFARQCANALAVAELLA-GHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAERFVA 310 (366)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-hCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHHHHHH
Confidence 23444566677777777787 6532000110 012 36666553 3 5566667776
Q ss_pred cccEEEc---------------------CCC--cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 423 KWHVYMT---------------------KDG--RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 423 ~~gI~v~---------------------~gg--Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+.++... +.| |+|++- |+.+.+++.|.++++.+
T Consensus 311 ~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~~ 366 (366)
T PRK07582 311 ASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDAL 366 (366)
T ss_pred hCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhhC
Confidence 6665432 112 999876 56677777777777653
No 189
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.88 E-value=3.1e-20 Score=185.93 Aligned_cols=338 Identities=10% Similarity=0.013 Sum_probs=198.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+|+..|..-...|. .+|.|.+++.+.++... ...........++++.++++. + .+.+++ +++|
T Consensus 30 g~~~lD~~~~~~~~~~Gh--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~----~~~~~~--~~SG 97 (400)
T PTZ00125 30 GKKYYDFLSAYSAVNQGH--CHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF----G----YDKVLP--MNSG 97 (400)
T ss_pred CCEEEEcccCHhhccCCc--CCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC----C----CCEEEE--eCCc
Confidence 356889887743111122 37889999988775321 011111223344555555542 1 256778 8999
Q ss_pred hhHHHHHHHHHHHh--------CCCCEEEEcCCCCcchHHHhh-hCCCCee---eeeeecC--CCCCCCHHHHHHHHHcC
Q 012628 161 TGSLRLAAALIERY--------FPGAKVLISSPTWGNHKNIFN-DARVPWS---EYRYYDP--KTVGLDFEGMIADIKAA 226 (459)
Q Consensus 161 t~a~~l~~~~~~~~--------~~gd~Vlv~~p~y~~~~~~~~-~~G~~v~---~v~~~~~--~~~~~d~e~l~~~i~~~ 226 (459)
++|++.+.++.... ..+++|++.+-+|........ ..+.... ..+.... .-...|++.+++.++.
T Consensus 98 s~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~- 176 (400)
T PTZ00125 98 AEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD- 176 (400)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC-
Confidence 99999997765432 135789988888776533222 2221100 0010000 0001389999999862
Q ss_pred CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC
Q 012628 227 PGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (459)
Q Consensus 227 ~~~~~~ii~~~p~NPTG~~~s-~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (459)
++++++++.+++||||.+++ .+.+++|.++|++||+++|+||+|.+++..+ ..+.. ......++++ ++||.
T Consensus 177 -~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G---~~~~~-~~~~~~pd~~---~~sK~ 248 (400)
T PTZ00125 177 -PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTG---KLLAH-DHEGVKPDIV---LLGKA 248 (400)
T ss_pred -CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhhHH-HhcCCCCCEE---EEccc
Confidence 36788888889999999886 4569999999999999999999998876532 11111 1111222333 47899
Q ss_pred cccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
++.+++|+||+++ +++..+. +.......+.+.+.+.+.++...|+.- .+ +...++.+++.+.+.+
T Consensus 249 l~~g~~~ig~v~~---~~~~~~~----~~~~~~~~t~~~~~~~~~aa~~~l~~i------~~--~~~~~~~~~~~~~l~~ 313 (400)
T PTZ00125 249 LSGGLYPISAVLA---NDDVMLV----IKPGEHGSTYGGNPLACAVAVEALEVL------KE--EKLAENAQRLGEVFRD 313 (400)
T ss_pred ccCCCcCcEEEEE---cHHHHhh----ccCCCCCCCCCcCHHHHHHHHHHHHHH------Hh--cCHHHHHHHHHHHHHH
Confidence 9854469999876 7774433 332222223344555666654443210 00 1223444445555566
Q ss_pred HHhhcc-CCCCCcccccCCcceeeecCC------C-HHHHHHHHhcccEEEcCCC----cEEEcc-CChhhHHHHHHHHH
Q 012628 386 SLSAKD-KSGKDWSFILRQIGMFSFTGL------N-KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAII 452 (459)
Q Consensus 386 ~L~~~~-g~~~~~~~~~~~~g~f~~~~l------~-~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~e~i~~~~~~l~ 452 (459)
.|+ ++ +..+.+....+. |.+.|+.+ + .++.++|++ +||.+.|++ ||+... .+++++++++++|.
T Consensus 314 ~l~-~l~~~~~~~~~~~~~-g~~~~v~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~ 390 (400)
T PTZ00125 314 GLK-ELLKKSPWVKEIRGK-GLLNAIVFDHSDGVNAWDLCLKLKE-NGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIK 390 (400)
T ss_pred HHH-HHHhcCCCeEEEecc-cEEEEEEEccCcchHHHHHHHHHHH-CCeEEeecCCCEEEEECCccCCHHHHHHHHHHHH
Confidence 665 43 111112223444 44544422 1 245667765 599999875 888542 38999999999999
Q ss_pred HHHhhc
Q 012628 453 DSYHNV 458 (459)
Q Consensus 453 ~~~~~~ 458 (459)
++++++
T Consensus 391 ~~l~~~ 396 (400)
T PTZ00125 391 KVLKSF 396 (400)
T ss_pred HHHHHH
Confidence 988765
No 190
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.88 E-value=2.4e-20 Score=184.98 Aligned_cols=274 Identities=14% Similarity=0.102 Sum_probs=177.5
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh----hCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~----~~G~ 199 (459)
+.....+|++.+|++... ++.++ +++|+.++..+ +...+.+||+|+++.|.|......+. ..|+
T Consensus 59 ~~pt~~~Le~~lA~l~G~-------~~al~---~~sG~~Ai~~~--l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi 126 (386)
T PRK06767 59 GNPTVKLFEERMAVLEGG-------EEALA---FGSGMAAISAT--LIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMI 126 (386)
T ss_pred CCcchHHHHHHHHHHhCC-------CcEEE---ECCHHHHHHHH--HHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCe
Confidence 555678999999999643 34444 47778888877 45557899999999998876555443 3454
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
++..++. .|++++++++++ +++++++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 127 ~~~~~~~-------~d~~~l~~~i~~---~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~- 192 (386)
T PRK06767 127 THSFCDM-------ETEADIENKIRP---NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQR- 192 (386)
T ss_pred EEEEeCC-------CCHHHHHHhhCc---CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 4433322 478999998875 7889999999999999954 6788899999999999999986433210
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCc-ceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
.+ . ...++++.|+||.++.+|+|+ ||+++ +++.++++....... .....+.+.+.++...|+.
T Consensus 193 -----pl----~-~g~Div~~S~sK~l~g~g~~~gG~v~~---~~~~i~~~~~~~~~~---~g~~~~~~~a~l~~~~L~t 256 (386)
T PRK06767 193 -----PL----E-LGCDAVVHSATKYIGGHGDVVAGVTIC---KTRALAEKIRPMRKD---IGGIMAPFDAWLLLRGLKT 256 (386)
T ss_pred -----ch----h-cCCcEEEecCcceecCCCCceeEEEEe---ChHHHHHHHHHHHHH---hCCCCCHHHHHHHHcCCCc
Confidence 11 1 123578899999999899997 77654 666555544332221 1112333333333332322
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc-c-----------cCCcceeeec-CCCH----HHHHHHH
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF-I-----------LRQIGMFSFT-GLNK----AQSDNMT 421 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~-----------~~~~g~f~~~-~l~~----~~~~~ll 421 (459)
+....++.+++.+.+.+.|+ +++. +.. . ...+|++.|. .-+. ++++.|
T Consensus 257 ----------l~~r~~~~~~~a~~la~~L~-~~p~---v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l- 321 (386)
T PRK06767 257 ----------LAVRMDRHCDNAEKIVSFLK-NHDA---VEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDL- 321 (386)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-cCCC---ccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhC-
Confidence 34556677888888888998 7631 331 1 1235666543 2122 233333
Q ss_pred hcccEEEcCCC-------------------------------cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 422 NKWHVYMTKDG-------------------------------RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 422 ~~~gI~v~~gg-------------------------------Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
+..++.+.=|| |||++- |+.+.+++-|.++++.
T Consensus 322 ~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 322 HFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALKK 385 (386)
T ss_pred CccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 44566554441 899865 6778888888887764
No 191
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=1.2e-20 Score=187.07 Aligned_cols=216 Identities=18% Similarity=0.152 Sum_probs=150.8
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~G~ 199 (459)
+..-..+|++.+|++... ++.++ +++|++++.++ +...+.+||+|+++.|+|..... .++..|+
T Consensus 62 ~~p~~~~le~~lA~l~g~--------~~~i~--~ssG~~Ai~~~--l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi 129 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGA--------EAATA--FSTGMAAISNT--LYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGV 129 (398)
T ss_pred CChHHHHHHHHHHHHhCC--------CeEEE--eCChHHHHHHH--HHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCe
Confidence 455678999999999653 23445 68888999887 44557899999999999987543 3456788
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++. .|++.+++++++ +++++++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 130 ~v~~vd~-------~d~e~l~~~i~~---~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~- 195 (398)
T PRK08249 130 DVTLCET-------GDHEQIEAEIAK---GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN- 195 (398)
T ss_pred EEEEcCC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC-
Confidence 7776543 589999999975 7889999999999999955 7779999999999999999988654321
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCCh
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 359 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 359 (459)
.+ . ....+++.|+||.++.+|.++|++ ++.+++..+++.... .......+...+.++..-|+
T Consensus 196 -----~l----~-~~~Divv~S~sK~l~g~~~~~gG~--vv~~~~l~~~l~~~~----~~~g~~~s~~~a~l~l~~l~-- 257 (398)
T PRK08249 196 -----PL----A-LGADLVIHSATKFLSGHADALGGV--VCGSKELMEQVYHYR----EINGATMDPMSAYLILRGMK-- 257 (398)
T ss_pred -----ch----h-hCCCEEeccCceecCCCCCceEEE--EECCHHHHHHHHHHH----HhcCCCCCHHHHHHHHhCcc--
Confidence 11 1 123477899999999788888655 334777555544322 22222444444444332222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
.+....++..++++.+.+.|+ +.+
T Consensus 258 --------tL~~R~~~~~~na~~la~~L~-~~p 281 (398)
T PRK08249 258 --------TLKLRVRQQQESAMALAKYLQ-THP 281 (398)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 234555666777788888887 653
No 192
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.88 E-value=1.5e-20 Score=187.42 Aligned_cols=329 Identities=14% Similarity=0.101 Sum_probs=205.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-+.-|.. +|.|.+++.+.+++.. ...| +..-..+|.+.++++. + .+.+.+ +++
T Consensus 34 G~~ylD~~~g~~~~~lGh~--~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~L~~~~----~----~~~~~f--~~S 100 (397)
T TIGR03246 34 GKEYIDFAGGIAVNALGHA--HPELVKALIEQADKLWHIGNGY-TNEPVLRLAKKLVDAT----F----ADKVFF--CNS 100 (397)
T ss_pred CCEEEECCcCHhhccCCCC--CHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCEEEE--eCC
Confidence 4578999887543344553 7899999988876421 1122 2222345666666552 1 257888 999
Q ss_pred chhHHHHHHHHHHHhC------CCCEEEEcCCCCcchH-HHhhhCCC------------CeeeeeeecCCCCCCCHHHHH
Q 012628 160 GTGSLRLAAALIERYF------PGAKVLISSPTWGNHK-NIFNDARV------------PWSEYRYYDPKTVGLDFEGMI 220 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~------~gd~Vlv~~p~y~~~~-~~~~~~G~------------~v~~v~~~~~~~~~~d~e~l~ 220 (459)
|++|++.+.++...+. ..++|+..+-+|.+.. ..+...|. .+..+|. .|++.++
T Consensus 101 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 173 (397)
T TIGR03246 101 GAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAK 173 (397)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHH
Confidence 9999999988776552 2367888887776653 22232221 1122222 3789999
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012628 221 ADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (459)
Q Consensus 221 ~~i~~~~~~~~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (459)
+.+.+ +++++++..++++.|... +++.+++|.++|++||+++|+||+|.+++..+ ..+....+ ...++++
T Consensus 174 ~~l~~---~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G---~~~a~~~~-gv~pDi~-- 244 (397)
T TIGR03246 174 ALISD---KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG---ELYAYMHY-GVTPDIL-- 244 (397)
T ss_pred HHhcc---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc---cchhhhhc-CCCCCEE--
Confidence 98864 677777776666667554 88999999999999999999999998886432 12221111 2223333
Q ss_pred EcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012628 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 379 (459)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 379 (459)
++||.++ .|+|+||+++ +++ +.+.+.......+.+.+.+++.++...|+.. . -++..++++++
T Consensus 245 -t~~K~lg-gG~pigav~~---~~~----i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~------~--~~~l~~~~~~~ 307 (397)
T TIGR03246 245 -TSAKALG-GGFPIGAMLT---TTE----IAAHLKVGTHGTTYGGNPLACAVAGKVLDLV------N--TPELLAGVKQR 307 (397)
T ss_pred -Eeehhhh-CCcceeEEEE---cHH----HHHhccCCCcCCCCCCCHHHHHHHHHHHHHH------h--hccHHHHHHHH
Confidence 7999998 8999999876 777 4443332222222234445555554444311 0 13456788888
Q ss_pred HHHHHHHHhhccCCCCC-cccccCCcceeeec--C----CCHHHHHHHHhcccEEEcCCC----cEEEcc-CChhhHHHH
Q 012628 380 RQKLFDSLSAKDKSGKD-WSFILRQIGMFSFT--G----LNKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYL 447 (459)
Q Consensus 380 ~~~l~~~L~~~~g~~~~-~~~~~~~~g~f~~~--~----l~~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~e~i~~~ 447 (459)
.+++.+.|+ +++.... +..+...|.++.+. . ....+++.|++ +||.+.+.| |++.+. .++++++++
T Consensus 308 ~~~l~~~L~-~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~ 385 (397)
T TIGR03246 308 HDLFVDGLE-KINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAE-EGVIALIAGPNVVRFAPSLVISDDDIDEG 385 (397)
T ss_pred HHHHHHHHH-HHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHH-CCeEEeecCCCEEEEeCCCCCCHHHHHHH
Confidence 888888887 6541111 22233344433221 1 12345666666 599987654 774332 289999999
Q ss_pred HHHHHHHHhhc
Q 012628 448 ADAIIDSYHNV 458 (459)
Q Consensus 448 ~~~l~~~~~~~ 458 (459)
+++|.+++.++
T Consensus 386 ~~~l~~~l~~~ 396 (397)
T TIGR03246 386 LARFERAIEQV 396 (397)
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 193
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.88 E-value=1.4e-20 Score=186.98 Aligned_cols=215 Identities=12% Similarity=0.113 Sum_probs=146.6
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh----hhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~G~ 199 (459)
+..-..+|++.+|++.... . ..+ +++|+.++..+ +...+.+||+|+++.|.|..+...+ +..|+
T Consensus 63 ~~p~~~~Le~~lA~l~G~~-------~-~~~--~~sG~~Ai~~~--l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 130 (398)
T PRK07504 63 SNPTVDMFEKRMCALEGAE-------D-ARA--TASGMAAVTAA--ILCQVKAGDHVVAARALFGSCRYVVETLLPRYGI 130 (398)
T ss_pred CCchHHHHHHHHHHHhCCC-------e-eeE--ecCHHHHHHHH--HHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCe
Confidence 4556789999999996442 2 233 57888888766 4455789999999999998765443 45688
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++ .+|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 131 ~v~~vd-------~~d~e~l~~ai~~---~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~- 196 (398)
T PRK07504 131 ESTLVD-------GLDLDNWEKAVRP---NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK- 196 (398)
T ss_pred EEEEEC-------CCCHHHHHHhcCc---CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC-
Confidence 777764 2689999999875 7889999999999999964 7788899999999999999987544321
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHH-HHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAAR-VKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
.. ..+.++++.|+||.++.+|+|+|+++ +.+++.+.+ +...+. ......+...+.++..-|+
T Consensus 197 -----~~-----~~gaDivv~S~sK~l~g~g~~~GG~v--v~~~~~i~~~~~~~~~----~~g~~~s~~~A~~~l~~L~- 259 (398)
T PRK07504 197 -----PL-----ELGAHIVVYSATKHIDGQGRCLGGVV--LSDKAWIEEHLQDYFR----HTGPSLSPFNAWTLLKGLE- 259 (398)
T ss_pred -----ch-----hhCCCEEEeeccccccCCccceEEEE--EeCcHHHHHHHHHHHH----HhCCCCCHHHHHHHHhccc-
Confidence 11 11346889999999998999998663 235553332 222222 1122333333333332222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
.+....++..++...+.+.|+ +.
T Consensus 260 ---------tl~~R~~~~~~na~~la~~L~-~~ 282 (398)
T PRK07504 260 ---------TLPVRVRQQTESAAAIADFLA-GH 282 (398)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHH-cC
Confidence 234455555667777777777 54
No 194
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.88 E-value=1.7e-20 Score=185.99 Aligned_cols=315 Identities=18% Similarity=0.169 Sum_probs=212.3
Q ss_pred cCCCCCCccCcHHHHHHHHHHhhcCCCC----CCCC----CcccHHHHHHHHHHHhcCCCCcccc-CceEEeecccchhH
Q 012628 93 YRTEELQPYVLDVVKKAENLMLERGENK----EYLP----IEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTGS 163 (459)
Q Consensus 93 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~Y~~----~~g~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt~a 163 (459)
|+|..+..++|+.|.+++.+.+...... .+.. ..-+.++|+.++++++.. + ++|++ +.|+|.+
T Consensus 2 Yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~------~~~~v~~--~~~~t~a 73 (371)
T PF00266_consen 2 YLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAP------PDEEVVF--TSNGTEA 73 (371)
T ss_dssp EEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSS------TTEEEEE--ESSHHHH
T ss_pred EeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCc------ccccccc--ccccchh
Confidence 4566666677999999999887432111 1111 224468899999998765 4 78988 9999999
Q ss_pred HHHHHHHHHH-hCCCCEEEEcCCCCcchH----HHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCC
Q 012628 164 LRLAAALIER-YFPGAKVLISSPTWGNHK----NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (459)
Q Consensus 164 ~~l~~~~~~~-~~~gd~Vlv~~p~y~~~~----~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p 238 (459)
++.+...+.. +.+||+|++.+-.|+... ...+..|++++.+|.+ .+..+|++.+++++++ ++++++++..
T Consensus 74 ~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~--~~~~~~~~~~~~~l~~---~~~lv~~~~~ 148 (371)
T PF00266_consen 74 LNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD--PGGSLDLEDLEEALNP---DTRLVSISHV 148 (371)
T ss_dssp HHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG--TTSSCSHHHHHHHHHT---TESEEEEESB
T ss_pred hhhhhhccccccccccccccccccccccccccccccccchhhhcccccc--ccchhhhhhhhhhhcc---ccceEEeecc
Confidence 9998444321 679999999998887655 3445779999999984 4568999999999985 8889988999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
+|-||.. .++++|.++|+++|+++++|.+ +.++..+.+ +...+.++++.|..|.+|++| +|++++
T Consensus 149 ~~~tG~~---~pi~~I~~~~~~~~~~~~vD~~-~~~g~~~id---------~~~~~~D~~~~s~~Kl~gp~G--~g~l~v 213 (371)
T PF00266_consen 149 ENSTGVR---NPIEEIAKLAHEYGALLVVDAA-QSAGCVPID---------LDELGADFLVFSSHKLGGPPG--LGFLYV 213 (371)
T ss_dssp ETTTTBB---SSHHHHHHHHHHTTSEEEEE-T-TTTTTSS-----------TTTTTESEEEEESTSTTSSST--EEEEEE
T ss_pred cccccEE---eeeceehhhhhccCCceeEech-hcccccccc---------ccccccceeeecccccCCCCc--hhhhee
Confidence 9999999 5677899999999999999999 556543222 233456789999999777777 799987
Q ss_pred EeCChhHHHHHHHHHH-----------h-----hccccc-cCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Q 012628 319 VCSSSDLAARVKSQLK-----------R-----LARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQ 381 (459)
Q Consensus 319 v~~~~~~~~~~~~~~~-----------~-----~~~~~~-~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (459)
+++..+++..... . ...... +.++.....++...++ +.. +..+++++++..++.+
T Consensus 214 ---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~---~~~--~~g~~~i~~~~~~l~~ 285 (371)
T PF00266_consen 214 ---RPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALK---LLE--EIGIERIRERIRELAE 285 (371)
T ss_dssp ---EHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHH---HHH--HHHHHHHHHHHHHHHH
T ss_pred ---hhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHh---hhh--ccccccchhhhhhHHH
Confidence 7775555521100 0 000011 1233333333222221 111 2346888899999999
Q ss_pred HHHHHHhhccCCCCCcccccC-----Cccee--eecCCCHHHHHHHHhcccEEEcCC--------------C--cEEEcc
Q 012628 382 KLFDSLSAKDKSGKDWSFILR-----QIGMF--SFTGLNKAQSDNMTNKWHVYMTKD--------------G--RISLAG 438 (459)
Q Consensus 382 ~l~~~L~~~~g~~~~~~~~~~-----~~g~f--~~~~l~~~~~~~ll~~~gI~v~~g--------------g--Ris~~~ 438 (459)
++.+.|. +++. +.+..+ .++.. .+.+.+.+.+...+++.||.+..| | |||+..
T Consensus 286 ~~~~~l~-~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~ 361 (371)
T PF00266_consen 286 YLREALE-ELPG---IEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHY 361 (371)
T ss_dssp HHHHHHH-HTTT---EEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GT
T ss_pred HHHhhhh-cCCc---eeEeeecccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccC
Confidence 9999999 8752 444332 23333 334667766665555569999874 3 999887
Q ss_pred C-ChhhHHHH
Q 012628 439 L-SLAKCEYL 447 (459)
Q Consensus 439 ~-~~e~i~~~ 447 (459)
+ |++||+++
T Consensus 362 ~nt~~dv~~l 371 (371)
T PF00266_consen 362 YNTEEDVDRL 371 (371)
T ss_dssp TSSHHHHHHH
T ss_pred CCCHHHHhhC
Confidence 7 78888875
No 195
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.88 E-value=4.5e-20 Score=182.20 Aligned_cols=222 Identities=14% Similarity=0.078 Sum_probs=149.3
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-CC
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR 198 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~G 198 (459)
.+| +.....+|++++|++.. .+++++ ++||++++.++ +...+.+||+|+++.|+|......+.. .+
T Consensus 46 ~R~-~~p~~~~le~~lA~l~g--------~~~v~~--~~gg~~Ai~~~--l~all~~GD~Vl~~~p~y~~~~~~~~~~~~ 112 (382)
T TIGR02080 46 SRS-GNPTRDLLQQALAELEG--------GAGAVV--TNTGMSAIHLV--TTALLGPDDLLVAPHDCYGGTYRLLNALAK 112 (382)
T ss_pred cCC-CCchHHHHHHHHHHHhC--------CCcEEE--EcCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHh
Confidence 344 55567899999999863 256888 99999999998 444578999999999999865544432 22
Q ss_pred CCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCC
Q 012628 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGS 278 (459)
Q Consensus 199 ~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~ 278 (459)
.....+...+ ..|++.+++++++ +++++++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 113 ~~~~~v~~~d----~~d~~~l~~ai~~---~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~ 182 (382)
T TIGR02080 113 KGCFRVLFVD----QGDEQALRAALAQ---KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN 182 (382)
T ss_pred hcCeEEEEEC----CCCHHHHHHhcCc---CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 2223333321 1378999999875 6889999999999999965 6678888999999999999997654221
Q ss_pred CCCChhHHHHHHhcCCeEEEEEcCCcCcc-cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhC
Q 012628 279 LDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVG 357 (459)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 357 (459)
.+. . ..+++++|+||.++ .+|++.|++ ++.+++..+++... ........+...+..+..-++
T Consensus 183 ------pl~----~-gaDivv~S~sK~l~G~~~~~~G~i--~~~~~~~~~~l~~~----~~~~g~~~sp~~a~l~lr~l~ 245 (382)
T TIGR02080 183 ------PLA----L-GADLVLHSCTKYLNGHSDVIAGAV--IAKDPQVAEELAWW----ANNLGVTGGAFDSYLTLRGLR 245 (382)
T ss_pred ------chh----h-CCCEEEeecceeccCCCCceeEEE--EeCCHHHHHHHHHH----HHccCCCCCHHHHHHHHcccc
Confidence 111 1 23588899999885 578899997 45566654444322 222222444444443322222
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 358 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
.+....++..++...+.+.|+ ..+
T Consensus 246 ----------tl~~R~~~~~~na~~~a~~L~-~~p 269 (382)
T TIGR02080 246 ----------TLVARMRLQQRNAQAIVEYLQ-TQP 269 (382)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 234445566677777777777 543
No 196
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.87 E-value=1.2e-19 Score=181.97 Aligned_cols=338 Identities=11% Similarity=0.014 Sum_probs=197.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|.--..-+.. +|.|.+++.+.+++.....+ .+.....++-+.+++..... ..+.+.+ +++
T Consensus 32 G~~ylD~~~g~~~~~lGh~--~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~v~f--~~s 102 (420)
T TIGR00700 32 GNRLIDFASGIAVLNIGHS--HPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGS-----GPKKSVF--FNS 102 (420)
T ss_pred CCEEEECccCHHhccCCCC--CHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCC-----CCCEEEE--eCC
Confidence 3567888887542223443 68899999888865321122 12222334555555543211 0257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhC-C--------C-----CeeeeeeecCCC---------CCCCH
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-R--------V-----PWSEYRYYDPKT---------VGLDF 216 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-G--------~-----~v~~v~~~~~~~---------~~~d~ 216 (459)
|++|++.+.++...+....+|+....+|.+........ | . .+..+|...... +.-++
T Consensus 103 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
T TIGR00700 103 GAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGEL 182 (420)
T ss_pred cHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHH
Confidence 99999999988876665678999998887653322211 1 1 122233210000 00024
Q ss_pred HHHHHHHH--cCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012628 217 EGMIADIK--AAPGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (459)
Q Consensus 217 e~l~~~i~--~~~~~~~~ii~~~p~NPTG~~~s-~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (459)
+.+++.+. ..++....+|+...+.-+|.+++ ++.+++|.++|++||+++|+||+|.+++..+ ..++...+ +..
T Consensus 183 ~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g---~~~a~~~~-~~~ 258 (420)
T TIGR00700 183 AAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG---AMFACEHE-GPE 258 (420)
T ss_pred HHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc---hhHHHhhc-CCC
Confidence 56666653 22346677777777777888665 4459999999999999999999999997643 12222221 222
Q ss_pred CeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHh---CChhhHHHHHHHHH
Q 012628 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEME 370 (459)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~~~~~~~~~~~~~~ 370 (459)
+++ .+|||.++ +|+|+||+++ ++++ .+.+.......+.+.+.+++.++...| +++.+ .+.++
T Consensus 259 pDi---~~lsK~l~-~G~pig~v~~---~~~i----~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~----~~~~~ 323 (420)
T TIGR00700 259 PDL---ITTAKSLA-DGLPLSGVTG---RAEI----MDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGL----IERAR 323 (420)
T ss_pred CCE---EEeecccc-CCcceEEEEe---cHHH----HhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccH----HHHHH
Confidence 343 36999999 9999999976 7774 333322222233355666776664443 33222 22223
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC--------CHHH----HHHHHhcccEEEcCCC------
Q 012628 371 MMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL--------NKAQ----SDNMTNKWHVYMTKDG------ 432 (459)
Q Consensus 371 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l--------~~~~----~~~ll~~~gI~v~~gg------ 432 (459)
+..++ .++.|.+... +++. +..+.+. |.+.|+.+ +.++ .+.++ ++||.+.|++
T Consensus 324 ~~g~~---l~~~L~~l~~-~~~~---~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~p~~~f~~~l 394 (420)
T TIGR00700 324 QIGRL---VTDRLTTLKA-VDPR---IGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAAH-AAGLLLLTCGMFGNII 394 (420)
T ss_pred HHHHH---HHHHHHHHHh-hCCC---EEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeccCCCCCEE
Confidence 33333 2223322222 3321 3344555 44544422 1222 33334 4699999863
Q ss_pred cEEEcc-CChhhHHHHHHHHHHHHh
Q 012628 433 RISLAG-LSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 433 Ris~~~-~~~e~i~~~~~~l~~~~~ 456 (459)
||+++. .+++++++++++|.++++
T Consensus 395 Rl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 395 RFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EEECCCCcCHHHHHHHHHHHHHHhh
Confidence 888754 489999999999999875
No 197
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.87 E-value=1.2e-19 Score=181.76 Aligned_cols=336 Identities=10% Similarity=0.064 Sum_probs=199.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-...+.. +|.|.+++.+.++......+ .+..-..++-+.+++..... ..+.+.+ +++
T Consensus 39 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~~~f--~~s 109 (421)
T PRK09792 39 GNEYIDFAAGIAVLNTGHR--HPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVS-----GQAKTAF--FTT 109 (421)
T ss_pred CCEEEEccCchhhhcCCCC--CHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCC-----CCceEEE--eCC
Confidence 3567888777542223443 78899998888765321111 12222234444444432110 0256888 889
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-CC--------C-----CeeeeeeecCCCCCC----CHHHHHH
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDPKTVGL----DFEGMIA 221 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~G--------~-----~v~~v~~~~~~~~~~----d~e~l~~ 221 (459)
|++|++.+.++...+....+|+....+|.+....... .| . .+..+|+..+. .++ +++.+++
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~ 188 (421)
T PRK09792 110 GAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIER 188 (421)
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHH
Confidence 9999999988877665556899999888765322111 11 0 12333332111 122 3477777
Q ss_pred HHHc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012628 222 DIKA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (459)
Q Consensus 222 ~i~~--~~~~~~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (459)
.+.. .+++..++++...++|+|..+ +++.+++|.++|++||+++|+||+|.+++..+ ..+....+ ...++
T Consensus 189 ~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~~~-~~~pD--- 261 (421)
T PRK09792 189 LFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG---KLFAMDHY-ADKPD--- 261 (421)
T ss_pred HHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHhc-CCCCc---
Confidence 7763 123556666667799999865 89999999999999999999999999987543 23333333 22334
Q ss_pred EEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHH---HHhCChhhHHHHHHHHHHHHHH
Q 012628 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAGR 375 (459)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~ 375 (459)
+.+|||.++ +|+|+||+++ +++..+.+ .......+.+.+.+++.++. .+++++++ +++.+ .
T Consensus 262 i~t~gK~l~-~G~pigav~~---~~~i~~~~----~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~-------~~~~~-~ 325 (421)
T PRK09792 262 LMTMAKSLA-GGMPLSGVVG---NANIMDAP----APGGLGGTYAGNPLAVAAAHAVLNIIDKESL-------CERAN-Q 325 (421)
T ss_pred EEEeehhhc-CCCceEEEEE---cHHHHhcc----CCCCcCCCCCCCHHHHHHHHHHHHHHHhhhH-------HHHHH-H
Confidence 358999999 8999999866 77744333 22112223345556666443 33433322 23333 2
Q ss_pred HHHHHHHHHHHHhhccCCCCCcccccCCc-ceeeecCCC------------HHHHHHHHhcccEEEcCCC------cEEE
Q 012628 376 IKNVRQKLFDSLSAKDKSGKDWSFILRQI-GMFSFTGLN------------KAQSDNMTNKWHVYMTKDG------RISL 436 (459)
Q Consensus 376 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~-g~f~~~~l~------------~~~~~~ll~~~gI~v~~gg------Ris~ 436 (459)
+.++.+...+.|.++++ .+....| |+++|+.+. ..+.+.+++ +||.+.+.| |+.+
T Consensus 326 ~g~~l~~~l~~l~~~~p-----~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~g~~~~~irl~P 399 (421)
T PRK09792 326 LGQRLKNTLIDAKESVP-----AIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALA-QGLLLLTCGAYGNVIRFLY 399 (421)
T ss_pred HHHHHHHHHHHHHHhCC-----CcceecccceEEEEEecCCccCCcchHHHHHHHHHHHH-CCcEEeecCCCCCEEEEeC
Confidence 22222222223331343 1234455 778776541 123445555 599986532 7776
Q ss_pred cc-CChhhHHHHHHHHHHHHh
Q 012628 437 AG-LSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 437 ~~-~~~e~i~~~~~~l~~~~~ 456 (459)
+. .+++++++++++|.++++
T Consensus 400 ~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 400 PLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCcCCHHHHHHHHHHHHHHHh
Confidence 65 599999999999999875
No 198
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=7.8e-20 Score=181.21 Aligned_cols=217 Identities=14% Similarity=0.096 Sum_probs=148.4
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hHHHhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~----~~~~~~~~G~ 199 (459)
+.....+|++++|++.... ..++ +++|+.++.++ +...+.+||+|+++.|.|.. +...+...|+
T Consensus 57 ~~p~~~~le~~lA~l~g~~--------~av~--~~sG~~Ai~~~--l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~ 124 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLEGTE--------AAVA--TSSGMGAIAAT--LLTILKAGDHLISDECLYGCTFALLEHALTKFGI 124 (391)
T ss_pred CCchHHHHHHHHHHHhCCC--------cEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCe
Confidence 4455678999999997542 3455 78888998887 44557899999999998764 3444566898
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++.+ |++.+++++++ +++++++++|+||||.+. ++++|+++|+++|+++|+|++|.......
T Consensus 125 ~~~~vd~~-------d~e~l~~~i~~---~tklV~le~p~Np~G~v~---dl~~I~~la~~~gi~livD~a~a~~~~~~- 190 (391)
T TIGR01328 125 QVDFINMA-------IPEEVKAHIKD---NTKIVYFETPANPTMKLI---DMERVCRDAHSQGVKVIVDNTFATPMLTN- 190 (391)
T ss_pred EEEEECCC-------CHHHHHHhhcc---CCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCchhccCC-
Confidence 88888762 78999998875 788999999999999994 57789999999999999999987543221
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCCh
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 359 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 359 (459)
.+ .. ...+++.|+||.++.+|.++|++ ++.+++.++++....... ......+...+.++...|+.
T Consensus 191 -----~~----~~-g~Divv~S~sK~lgg~g~~~gG~--v~~~~~li~~l~~~~~~~--~~g~~l~~~~a~l~l~~L~t- 255 (391)
T TIGR01328 191 -----PV----AL-GVDVVVHSATKYIGGHGDVVAGL--ICGKAELLQQIRMVGIKD--MTGSVISPFDAWLILRGLKT- 255 (391)
T ss_pred -----ch----hc-CCCEEEccccccccCCCCceEEE--EEcCHHHHHHHHHHHHHh--CCCCCCCcHHHHHHHhCcCc-
Confidence 11 11 24588899999999999887554 344777665554322111 11112233333333322322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
+....++..++.+.+.+.|+ +.
T Consensus 256 ---------l~~r~~~~~~na~~la~~L~-~~ 277 (391)
T TIGR01328 256 ---------LNIRMKRHSENAMKVAEYLK-SH 277 (391)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHH-hC
Confidence 33445666667777777777 54
No 199
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.87 E-value=6.1e-20 Score=184.41 Aligned_cols=338 Identities=14% Similarity=0.078 Sum_probs=210.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...+|+..|.+-...|.. +|.|.+++.+.++... ..|.+..+..+|.+.+++.... .+.+.+ +++|+
T Consensus 49 G~~~lD~~~g~~~~~lGh~--~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~~~-------~~~v~~--~~sGs 116 (426)
T PRK00062 49 GNEYIDYVGSWGPMILGHA--HPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELVPS-------IEMVRM--VNSGT 116 (426)
T ss_pred CCEEEEcccchhhhhcCCC--CHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhCCC-------CCEEEE--ecCHH
Confidence 4578999988763333443 7899999998887643 4455667777888888877421 357888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhC-C------------CCeeeeeeecCCCCCCCHHHHHHHHHcCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-R------------VPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-G------------~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~ 228 (459)
+|++.+.++...+..+++|+..+++|.++...+... | .....++.....-.-.|++.+++.+...++
T Consensus 117 eA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 196 (426)
T PRK00062 117 EATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGD 196 (426)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCC
Confidence 999999887766656789999999999875322211 1 100001000000001378899888865344
Q ss_pred CcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 229 GSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~~s-~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
+..++++.....-+|.+.+ ++.+++|.++|++||+++|+||+|.++..+. .... ...+..+++ .+|||.++
T Consensus 197 ~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~----~~~~-~~~~~~pDi---~~~gK~l~ 268 (426)
T PRK00062 197 EIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL----GGAQ-GYYGVTPDL---TTLGKIIG 268 (426)
T ss_pred cEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC----ccHH-HHhCCCcch---HhhhhHhh
Confidence 5666666644445887775 8889999999999999999999998885431 1122 112222332 48999999
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHh---CChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEMEMMAGRIKNVRQKLF 384 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (459)
.||++|++++ +++..+.+... .......+.+.+.+++.++...| ++.++ .++.++..+..++.|.
T Consensus 269 -~G~p~ga~~~---~~~i~~~~~~~-~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~-------~~~~~~~~~~~~~~l~ 336 (426)
T PRK00062 269 -GGLPVGAFGG---RREIMEQLAPL-GPVYQAGTLSGNPLAMAAGLATLKLLKEPGF-------YEELEALTKRLAEGLK 336 (426)
T ss_pred -CCCcceeeeE---HHHHHHhhccC-CCceecccCcCCHHHHHHHHHHHHHHhcchH-------HHHHHHHHHHHHHHHH
Confidence 8999999865 77744443211 11111222244455555554443 22211 2344444444455555
Q ss_pred HHHhhccCCCCCccc-ccCCcceeee-cCC------------C----HHHHHHHHhcccEEEcCCC----cEEEccCChh
Q 012628 385 DSLSAKDKSGKDWSF-ILRQIGMFSF-TGL------------N----KAQSDNMTNKWHVYMTKDG----RISLAGLSLA 442 (459)
Q Consensus 385 ~~L~~~~g~~~~~~~-~~~~~g~f~~-~~l------------~----~~~~~~ll~~~gI~v~~gg----Ris~~~~~~e 442 (459)
+.++ +.+. .. +...|.++.+ +.. + ..+...+++ +||.+.+.+ ++++.. +++
T Consensus 337 ~~~~-~~~~----~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~-~Gv~v~~~~~~~~~~~~~~-t~~ 409 (426)
T PRK00062 337 EAAK-KAGI----PLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLD-EGVYLAPSQFEAGFVSAAH-TDE 409 (426)
T ss_pred HHHH-HcCC----ceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHH-CCeEeecCCcCceeeeccC-CHH
Confidence 4444 4542 22 3345655532 111 1 233455555 699998865 777544 999
Q ss_pred hHHHHHHHHHHHHhhc
Q 012628 443 KCEYLADAIIDSYHNV 458 (459)
Q Consensus 443 ~i~~~~~~l~~~~~~~ 458 (459)
++++++++|.++++++
T Consensus 410 ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 410 DIEKTLEAARKAFAAL 425 (426)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999875
No 200
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.5e-19 Score=173.35 Aligned_cols=317 Identities=15% Similarity=0.081 Sum_probs=212.5
Q ss_pred CCccCcHHHHHHHHHHhhcCCCCCCCCC--cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC
Q 012628 98 LQPYVLDVVKKAENLMLERGENKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF 175 (459)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~--~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~ 175 (459)
++.++++.|+++|..-.- .++.|. .-+.++++.+...+.... .+-+++ +.+||.+++.+ +.+.+.
T Consensus 12 GP~~v~~~V~~am~~~~~----~h~s~~F~~~~~~~~~~L~~v~~t~~-----~~~~ll--~gsGt~amEAa--v~sl~~ 78 (383)
T COG0075 12 GPVPVPPRVLLAMARPMV----GHRSPDFVGIMKEVLEKLRKVFGTEN-----GDVVLL--SGSGTLAMEAA--VASLVE 78 (383)
T ss_pred CCCCCCHHHHHHhcCCCC----CCCCHHHHHHHHHHHHHHHHHhcCCC-----CcEEEE--cCCcHHHHHHH--HHhccC
Confidence 445568999988876432 233331 122344444444433221 133444 78889999998 666678
Q ss_pred CCCEEEEcCCCCcc--hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHH
Q 012628 176 PGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEK 253 (459)
Q Consensus 176 ~gd~Vlv~~p~y~~--~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~ 253 (459)
|||+|++..-+.++ +..+++.+|++++.+.. +++..+|++++++++++.+ ...++.+.+.-.+||+. .++++
T Consensus 79 pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~~-~~~~V~~vH~ETSTGvl---npl~~ 152 (383)
T COG0075 79 PGDKVLVVVNGKFGERFAEIAERYGAEVVVLEV--EWGEAVDPEEVEEALDKDP-DIKAVAVVHNETSTGVL---NPLKE 152 (383)
T ss_pred CCCeEEEEeCChHHHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhcCC-CccEEEEEeccCccccc---CcHHH
Confidence 99999999988764 57889999999999988 6778999999999999644 44456666677778988 79999
Q ss_pred HHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc-ccCCCCcceEEEEeCChhHHHHHHHH
Q 012628 254 IADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQ 332 (459)
Q Consensus 254 i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~ 332 (459)
|+++|++||.++|+|.+ ..++-.+.+.+.| +-++++.+--|.+ ++|| +|++.+ +++.++.+...
T Consensus 153 I~~~~k~~g~l~iVDaV-sS~Gg~~~~vd~w---------giDv~itgSQK~l~~PPG--la~v~~---S~~a~e~~~~~ 217 (383)
T COG0075 153 IAKAAKEHGALLIVDAV-SSLGGEPLKVDEW---------GIDVAITGSQKALGAPPG--LAFVAV---SERALEAIEER 217 (383)
T ss_pred HHHHHHHcCCEEEEEec-ccCCCcccchhhc---------CccEEEecCchhccCCCc--cceeEE---CHHHHHHHhcC
Confidence 99999999999999999 7777554433333 4455555556666 5677 687766 77755555432
Q ss_pred ------------HHhhc--cccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 012628 333 ------------LKRLA--RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS 398 (459)
Q Consensus 333 ------------~~~~~--~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 398 (459)
..... ..+..++|.....+....|+.- -.+.++...++++++.+++++.++ .+|+ +
T Consensus 218 ~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i-----~~EGle~r~~RH~~~~~a~r~~~~-alGl----~ 287 (383)
T COG0075 218 KHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLI-----LEEGLEARIARHRRLAEALRAGLE-ALGL----E 287 (383)
T ss_pred CCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHH-HcCC----c
Confidence 11111 1222234443333333333211 135578999999999999999999 9985 4
Q ss_pred cccCC-------cceeeecCCCHH-HHHHHHhcccEEEcCC-----C---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 399 FILRQ-------IGMFSFTGLNKA-QSDNMTNKWHVYMTKD-----G---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 399 ~~~~~-------~g~f~~~~l~~~-~~~~ll~~~gI~v~~g-----g---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
..... ..+++-.+++.+ ....+++++||.+.+| | ||+..+ .+.+++...+.+|..++.++
T Consensus 288 ~~~~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 288 LFADPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred cccCcccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 44311 111222245543 3447888889999887 2 997544 48899999999999998865
No 201
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=8e-20 Score=181.53 Aligned_cols=215 Identities=13% Similarity=0.097 Sum_probs=149.7
Q ss_pred CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hHHHhhhCCCC
Q 012628 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFNDARVP 200 (459)
Q Consensus 125 ~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~----~~~~~~~~G~~ 200 (459)
.....+|++.+|++... ++.++ +++|++++.++ +...+.+||+|+++.|+|.. +...++..|.+
T Consensus 59 ~p~~~~Le~~lA~l~g~-------~~~v~---~~sG~~Ai~~~--l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~ 126 (405)
T PRK08776 59 NPTRDLLGEALAELEGG-------AGGVI---TATGMGAINLV--LNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFA 126 (405)
T ss_pred ChHHHHHHHHHHHHhCC-------CceEE---EcCHHHHHHHH--HHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcE
Confidence 33457889999988543 34454 57778999987 44457899999999999986 44455566777
Q ss_pred eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012628 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (459)
Q Consensus 201 v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~ 280 (459)
++.++. .|++.+++++++ +++++++++|+||||.+ .++++|+++|+++|+++|+|++|......
T Consensus 127 v~~v~~-------~d~~~l~~~i~~---~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~~~--- 190 (405)
T PRK08776 127 LITADL-------TDPRSLADALAQ---SPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPALQ--- 190 (405)
T ss_pred EEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 777754 378999988875 68889999999999999 67889999999999999999998753211
Q ss_pred CChhHHHHHHhcCCeEEEEEcCCcCcccC-CCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCCh
Q 012628 281 NDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 359 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 359 (459)
. .+ . ....+++.|.+|.++.+ +...|++ ++.+++..+++..... ....+.+.+.+.++...++
T Consensus 191 -~--pl----~-~gaDivv~S~tK~l~g~~~~~~G~v--v~~~~~l~~~l~~~~~----~~g~~~s~~~a~l~~~gl~-- 254 (405)
T PRK08776 191 -K--PL----E-FGADLVLHSTTKYINGHSDVVGGAV--VARDAELHQQLVWWAN----ALGLTGSPFDAFLTLRGLR-- 254 (405)
T ss_pred -C--cc----c-ccCCEEEecCceeecCCCCceEEEE--EeCCHHHHHHHHHHHH----hcCCCCCHHHHHHHHhhhC--
Confidence 0 11 1 12358889999999755 4667776 4556665554443222 1222445555554443322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
.++...++..++...+.+.|+ +.+
T Consensus 255 --------tl~~r~~~~~~na~~la~~L~-~~p 278 (405)
T PRK08776 255 --------TLDARLRVHQENADAIAALLD-GHA 278 (405)
T ss_pred --------cHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 245667777778888888887 553
No 202
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.87 E-value=7e-20 Score=181.16 Aligned_cols=327 Identities=11% Similarity=0.030 Sum_probs=190.8
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhc-----CCCCCCC----CCcccHHHHHHHHHHHhcCCCCccccCceE
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-----GENKEYL----PIEGLAAFNKVTAELLFGADNSVLKEQRVA 153 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----~~~~~Y~----~~~g~~~lr~aia~~l~~~~~~~~~~~~i~ 153 (459)
..+++|+...|++....|++.+.+.+++.+.... ....... ...-+.++++.+|++++. ++.++
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~-------~~~l~ 76 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA-------PEAFI 76 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC-------CeEEE
Confidence 4689999999999888777677788877776421 0011111 334568899999999755 23365
Q ss_pred EeecccchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC---CCC
Q 012628 154 TVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGG 229 (459)
Q Consensus 154 ~~~t~ggt~a~~l~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~---~~~ 229 (459)
+ ++|. .++.. +...+ .+||.|++..-.+......++......+.++ ..|++.+++.++.. ++.
T Consensus 77 ~--~sG~-~a~~~---~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~ 143 (370)
T PRK05937 77 V--PSGY-MANLG---LCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFG 143 (370)
T ss_pred E--CChH-HHHHH---HHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCC
Confidence 5 5555 44432 23334 4777777766666555555554433333332 25889999988742 134
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (459)
++++++++++|+||.+. ++++|.++|+++|+++++||+|.....+ .+.. .........+.++.+.||||.+|+.
T Consensus 144 ~~~v~v~~v~s~~G~i~---pl~eI~~l~~~~~~~livDea~~~G~~g-~~g~--g~~~~~~~~~~~~~~~tlsK~~g~~ 217 (370)
T PRK05937 144 RIFIFVCSVYSFKGTLA---PLEQIIALSKKYHAHLIVDEAHAMGIFG-DDGK--GFCHSLGYENFYAVLVTYSKALGSM 217 (370)
T ss_pred cEEEEEecCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCccccccC-CCCC--chHHhhCCCCCcEEEEechhhhhcC
Confidence 66777899999999994 5778999999999999999997643222 1111 1111111112235678999999987
Q ss_pred CCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012628 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 389 (459)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 389 (459)
| .|.+ . .++..+.+.......... . +.+..+..++...+ ++. .+.-+..+++++++++++.+.|.
T Consensus 218 G--~~vl-~---~~~~~~~~~~~~~~~~~s-~-~~~~~~~~a~~aal---~~l---~~~~~~~~~~l~~l~~~l~~~l~- 282 (370)
T PRK05937 218 G--AALL-S---SSEVKQDLMLNSPPLRYS-T-GLPPHLLISIQVAY---DFL---SQEGELARKQLFRLKEYFAQKFS- 282 (370)
T ss_pred c--eEEE-c---CHHHHHHHHHhCCCCeec-C-CCCHHHHHHHHHHH---HHH---HhCcHHHHHHHHHHHHHHHHhcC-
Confidence 7 3332 2 444333333221111111 1 22233222222222 111 01113445677777788877776
Q ss_pred ccCCCCCcccccCCcceeeecCCCHHHHHHHHhcccEEEcC-----CC--cEEEccC-ChhhHHHHHHHHHHHHhhc
Q 012628 390 KDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTK-----DG--RISLAGL-SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 390 ~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~-----gg--Ris~~~~-~~e~i~~~~~~l~~~~~~~ 458 (459)
..+. ... ..+.+.+...+.+.+.++++||.+.. .+ |||++.. ++||+++++++|+++++++
T Consensus 283 ~~~~----~~~----~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 283 SAAP----GCV----QPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred CCCC----CCE----EEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4320 111 11222334444455555557998863 13 9998754 8999999999999988754
No 203
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=1.8e-19 Score=178.47 Aligned_cols=192 Identities=17% Similarity=0.077 Sum_probs=141.6
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHH-hCCCCEE
Q 012628 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKV 180 (459)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~-~~~gd~V 180 (459)
+.+.-.+++.+.+..+. . .+.....+|++++++++.. +++++ ++|||+|+.++ +... +.+||+|
T Consensus 12 ~~~~e~~~~~~~l~~~~-~--~~g~~~~~le~~la~~~g~--------~~~v~--~~sgt~al~la--l~al~~~~Gd~V 76 (379)
T PRK11658 12 MGDEELAAVKEVLRSGW-I--TTGPKNQALEQAFCQLTGN--------QHAIA--VSSATAGMHIT--LMALGIGPGDEV 76 (379)
T ss_pred CCHHHHHHHHHHHHcCC-c--cCCHhHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHcCCCCCCEE
Confidence 45666778888776543 2 2344578999999999754 34666 89999999998 4444 5699999
Q ss_pred EEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012628 181 LISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 260 (459)
Q Consensus 181 lv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~ 260 (459)
++++|+|..+...+...|++++.++++ .+++.+|++.+++++++ ++++++ |+||+|.. .++++|.++|++
T Consensus 77 iv~~~~~~~~~~~~~~~G~~~v~vd~~-~~~~~~d~~~l~~~i~~---~tkav~---~~~~~G~~---~d~~~i~~~a~~ 146 (379)
T PRK11658 77 ITPSLTWVSTLNMIVLLGATPVMVDVD-RDTLMVTPEAIEAAITP---RTKAII---PVHYAGAP---ADLDAIRAIGER 146 (379)
T ss_pred EECCCcHHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhccc---CCeEEE---EeCCCCCc---CCHHHHHHHHHH
Confidence 999999999999999999999999985 45677999999999975 677776 67889998 667889999999
Q ss_pred cCCeeEEeccCCC-CCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHH
Q 012628 261 KNHIPFFDVAYQG-FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS 331 (459)
Q Consensus 261 ~~~~ii~Deay~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~ 331 (459)
+|+++|+|++|.. ..+.+. . +..... .+.||++...+++.+-|++ ++.++++.+++..
T Consensus 147 ~gi~vi~D~a~a~g~~~~~~-----~----~g~~g~--~~~Sf~~~K~l~~g~GG~v--~~~~~~~~~~~~~ 205 (379)
T PRK11658 147 YGIPVIEDAAHAVGTYYKGR-----H----IGARGT--AIFSFHAIKNITCAEGGLV--VTDDDELADRLRS 205 (379)
T ss_pred cCCeEEEECCCccCCeECCe-----e----cCCCCC--EEEeCCCCCcCcccCceEE--EECCHHHHHHHHH
Confidence 9999999999653 222210 0 112222 3456665555566677776 4566776666554
No 204
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=8.9e-20 Score=180.21 Aligned_cols=216 Identities=14% Similarity=0.097 Sum_probs=153.1
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh----hCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~----~~G~ 199 (459)
+......|++++|++... +++++ ++||++++.++ +...+.+||+|++++|+|+.....+. ..|.
T Consensus 50 ~~pt~~~L~~~lA~l~g~--------~~~i~--~~sg~~Ai~~~--l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 50 GNPTRDVVQRALAELEGG--------AGAVL--TNTGMSAIHLV--TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred CCccHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCe
Confidence 555678999999999542 34777 89999999998 44557899999999999986443333 2333
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
++..++ ..|++.+++++++ +++++++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 118 ~v~~vd-------~~d~e~l~~~l~~---~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~~- 183 (386)
T PRK08045 118 RVLFVD-------QGDEQALRAALAE---KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQN- 183 (386)
T ss_pred EEEEeC-------CCCHHHHHHhccc---CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 444432 2588999998875 6788899999999999965 6678888999999999999987654311
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcc-cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
.+ .. ...+++.|++|.++ ..+.+.|++ ++.+++..+++.. .......+.+...+.++...|+.
T Consensus 184 -----pl----~~-gaDivv~S~tK~l~G~~d~~~G~v--i~~~~~~~~~l~~----~~~~~g~~~~p~~~~l~~rgl~t 247 (386)
T PRK08045 184 -----PL----AL-GADLVLHSCTKYLNGHSDVVAGVV--IAKDPDVVTELAW----WANNIGVTGGAFDSYLLLRGLRT 247 (386)
T ss_pred -----ch----hh-CCCEEEeecceeccCCCCceeEEE--EeCcHHHHHHHHH----HHHhcCCCCCHHHHHHHHhhhcc
Confidence 11 11 22488999999985 566778987 4556664444432 22233335666666666655543
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
+....++..+++..+.+.|+ +.+
T Consensus 248 ----------l~~R~~~~~~na~~la~~L~-~~p 270 (386)
T PRK08045 248 ----------LVPRMELAQRNAQAIVKYLQ-TQP 270 (386)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence 45667777788888888887 653
No 205
>PLN02624 ornithine-delta-aminotransferase
Probab=99.87 E-value=1.6e-19 Score=183.16 Aligned_cols=333 Identities=12% Similarity=0.066 Sum_probs=203.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+||..|.--...|+. +|.|.+++.+.++... ...+.......+|.+.++++. . .+.+++ +++|
T Consensus 74 G~~ylD~~sg~~~~~~Gh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~-~-------~~~~~f--~~SG 141 (474)
T PLN02624 74 GKKYLDFLSAYSAVNQGHC--HPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF-G-------YDMVLP--MNTG 141 (474)
T ss_pred CCEEEEcccchhcccCCCC--CHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc-C-------CCeEEE--eCCh
Confidence 3568888877432222332 7899999988886421 111123344566777777763 1 257888 8999
Q ss_pred hhHHHHHHHHHHHhC------C-CC-EEEEcCCCCcchHHHhhhCCC-------------CeeeeeeecCCCCCCCHHHH
Q 012628 161 TGSLRLAAALIERYF------P-GA-KVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGM 219 (459)
Q Consensus 161 t~a~~l~~~~~~~~~------~-gd-~Vlv~~p~y~~~~~~~~~~G~-------------~v~~v~~~~~~~~~~d~e~l 219 (459)
++|++.+.++...+. + ++ +|+...-+|.+.......... .+..+|. .|++.+
T Consensus 142 seA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 214 (474)
T PLN02624 142 AEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDAL 214 (474)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHH
Confidence 999999988776541 1 33 577777777654222111111 1122222 278999
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012628 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (459)
Q Consensus 220 ~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~-l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (459)
++.++..+++..++++.+++|++|.++++++ +++|.++|++||+++|+||+|.+++..+ ..+... .....++++
T Consensus 215 ~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG---~~~a~~-~~~i~pDiv- 289 (474)
T PLN02624 215 EKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTG---KMLACD-WEEVRPDVV- 289 (474)
T ss_pred HHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCc---chhhHH-hcCCCCCEE-
Confidence 9988765557888899999999999887775 9999999999999999999998776432 122211 112223333
Q ss_pred EEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
++||.+|.+++++|++++ +++ +...+.......+.+.+.+++.++...|+.- . + ....++..+
T Consensus 290 --~lsK~lggG~~pigav~~---~~~----i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l--~-~-----~~l~~~~~~ 352 (474)
T PLN02624 290 --ILGKALGGGVIPVSAVLA---DKD----VMLCIKPGEHGSTFGGNPLASAVAMAALQVV--Q-D-----EKLAERSAK 352 (474)
T ss_pred --EecccccCCCCcceeeee---cHH----HHhHhccCCcCCCCCCCHHHHHHHHHHHHHH--H-h-----chHHHHHHH
Confidence 468999977799999966 666 3333332222233345556666665544311 0 0 122334444
Q ss_pred HHHHHHHHHhhccC--CCCCcccccCCcceee-ecCCC-------HHHHHHHHhcccEEEcCCC----cEEEc-cCChhh
Q 012628 379 VRQKLFDSLSAKDK--SGKDWSFILRQIGMFS-FTGLN-------KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAK 443 (459)
Q Consensus 379 ~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~-~~~l~-------~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~e~ 443 (459)
+.+.+.+.|+ ++. ++..+..+.+.|.++. +++.+ .++++.|.+ +||.+.|++ ||+.. ..++++
T Consensus 353 ~~~~l~~~L~-~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e-~GV~v~p~~~~~lR~~p~l~~t~e~ 430 (474)
T PLN02624 353 LGQELRDQLQ-KIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKE-RGLLAKPTHDTIIRLAPPLSISEDE 430 (474)
T ss_pred HHHHHHHHHH-HHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHh-CCeEEecCCCCEEEEECCccCCHHH
Confidence 4455555554 431 1111233445555553 33321 234556555 699999875 77742 238999
Q ss_pred HHHHHHHHHHHHhh
Q 012628 444 CEYLADAIIDSYHN 457 (459)
Q Consensus 444 i~~~~~~l~~~~~~ 457 (459)
|++++++|++++++
T Consensus 431 id~~l~~L~~~l~~ 444 (474)
T PLN02624 431 LQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998864
No 206
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.87 E-value=2.3e-19 Score=181.53 Aligned_cols=339 Identities=13% Similarity=0.080 Sum_probs=194.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCC--CCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...||+..|..-..-|+. +|.|.+++.+.++...... +....-..++-+.+++.+.... .+.+.+ +++
T Consensus 53 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~-----~~~v~f--~~s 123 (451)
T PRK06918 53 GNQYIDFAGAIGTINVGHS--HPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSF-----DKKVLF--LNS 123 (451)
T ss_pred CCEEEEcCCchhhcCCCCC--CHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCC-----CCEEEE--cCC
Confidence 3567888877642233443 7889999988886531111 1112223344455554432110 157888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhC-CC-------------CeeeeeeecC--CCCCCC--------
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-RV-------------PWSEYRYYDP--KTVGLD-------- 215 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-G~-------------~v~~v~~~~~--~~~~~d-------- 215 (459)
|++|++.+.++.+.+....+|+....+|.+........ |- .+..+|.... ...++.
T Consensus 124 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (451)
T PRK06918 124 GAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFM 203 (451)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHH
Confidence 99999999988877665578999998887664332221 10 1222332100 001111
Q ss_pred HHHHHHHHHc--CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012628 216 FEGMIADIKA--APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (459)
Q Consensus 216 ~e~l~~~i~~--~~~~~~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (459)
++.+++.+.. .++....+|+...+.-.|.++ +.+.+++|.++|++||+++|+||+|.+++..+ ..++...+ +.
T Consensus 204 ~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g---~~~a~~~~-~v 279 (451)
T PRK06918 204 IEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTG---KYFAIEHF-DV 279 (451)
T ss_pred HHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccC---ceehhHhc-CC
Confidence 1233333321 123444555433333346644 55669999999999999999999999997643 22333222 22
Q ss_pred CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHh---CChhhHHHHHHHH
Q 012628 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEM 369 (459)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~~~~~~~~~~~~~ 369 (459)
.++ +.||||.++ +|+|+||+++ +++.. +.+.......+.+.+.+++.++...| +++.+
T Consensus 280 ~pD---i~t~sK~l~-~G~pig~v~~---~~~i~----~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~-------- 340 (451)
T PRK06918 280 VPD---LITVSKSLG-AGVPISGVIG---RKEIM----DESAPGELGGTYAGSPLGCAAALAVLDIIEKENL-------- 340 (451)
T ss_pred CCC---EEeeehhhc-CCCccEEEEE---cHHHH----hccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCH--------
Confidence 234 348999999 8999999976 77743 33332222334456667777754444 22222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc--CCCCCcccccCCcceeeecCC--------CHHH----HHHHHhcccEEEcCCC---
Q 012628 370 EMMAGRIKNVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL--------NKAQ----SDNMTNKWHVYMTKDG--- 432 (459)
Q Consensus 370 ~~~~~~~~~~~~~l~~~L~~~~--g~~~~~~~~~~~~g~f~~~~l--------~~~~----~~~ll~~~gI~v~~gg--- 432 (459)
.++.++..+++.+.|+ ++ +.| .+..+...|+++.|.-. +.+. .+.+ .++||.+.|++
T Consensus 341 ---~~~~~~~g~~l~~~l~-~l~~~~~-~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~~ 414 (451)
T PRK06918 341 ---NDRAIELGKVVMNRFE-EMKNKYN-CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTYG 414 (451)
T ss_pred ---HHHHHHHHHHHHHHHH-HHHhhCC-CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCCC
Confidence 2233333344444443 32 111 12234566777765321 2222 3333 44699999863
Q ss_pred ---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 433 ---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 433 ---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
||+++. .+++++++++++|.++++++
T Consensus 415 ~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 415 NVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 888764 58999999999999998753
No 207
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=2.3e-19 Score=179.75 Aligned_cols=340 Identities=14% Similarity=0.078 Sum_probs=211.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-..-+.. +|.|.+++.+.+++.....+ .+.....++-+.+++..... ..+.+.+ +++
T Consensus 39 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-----~~~~~~f--~~s 109 (421)
T PRK06777 39 GREYIDFAAGIAVLNTGHR--HPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPID-----GPAKTAF--FTT 109 (421)
T ss_pred CCEEEEcccCHHhhccCCC--CHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCC-----CCceEEE--eCC
Confidence 3567888777532222333 78899999888865321112 12333334555555443111 0357888 899
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-CCC-------------CeeeeeeecCCCCC----CCHHHHHH
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARV-------------PWSEYRYYDPKTVG----LDFEGMIA 221 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~~~----~d~e~l~~ 221 (459)
|++|++.+.++........+|+....+|.+....... .|. .+..+|.. +...+ .+++.+++
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~l~~ 188 (421)
T PRK06777 110 GAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYP-NELHGVSVEEALSSVER 188 (421)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCC-ccccCcCHHHHHHHHHH
Confidence 9999999988877665557899999888766433221 121 11222221 10111 13666777
Q ss_pred HHHc--CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012628 222 DIKA--APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (459)
Q Consensus 222 ~i~~--~~~~~~~ii~~~p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (459)
.+.. .++....+++...+++.|. +++++.+++|.++|++||+++|+||+|.+++..+ ..+....+ +..++++
T Consensus 189 ~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g---~~~~~~~~-~~~pDiv- 263 (421)
T PRK06777 189 LFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTG---KLFAMEYY-DVKPDLI- 263 (421)
T ss_pred HHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCC---chhhhhhc-CCCCCEE-
Confidence 7753 2345667777777888885 5889999999999999999999999999887543 22232222 2234433
Q ss_pred EEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
++||.++ +|+|+||+++ +++ +.+.+.......+.+.+.+++.++...|+.. ++ +...+++++
T Consensus 264 --~~sK~l~-~G~pigav~~---~~~----i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~------~~--~~l~~~~~~ 325 (421)
T PRK06777 264 --TMAKSLG-GGMPISAVVG---RAE----VMDAPAPGGLGGTYAGNPLAVAAALAVLDVI------AE--EKLCQRALI 325 (421)
T ss_pred --eeehhhc-CCCceEEEEE---cHH----HHhccCCCCCCCCCCcCHHHHHHHHHHHHHH------Hh--ccHHHHHHH
Confidence 7999999 9999999976 777 4333332222333356777777776666311 11 355677777
Q ss_pred HHHHHHHHHhhccCCC-CCcccccCCcceeee-cCC------CHHHH----HHHHhcccEEEcCCC------cEEEc-cC
Q 012628 379 VRQKLFDSLSAKDKSG-KDWSFILRQIGMFSF-TGL------NKAQS----DNMTNKWHVYMTKDG------RISLA-GL 439 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~-~~~~~~~~~~g~f~~-~~l------~~~~~----~~ll~~~gI~v~~gg------Ris~~-~~ 439 (459)
+.+++.+.|+ ++... +.+..+.+.|.+|.+ +.. +.++. ..+++ +||.+.|++ ||+.. ..
T Consensus 326 ~g~~l~~~L~-~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~~~~g~~lr~~ppl~i 403 (421)
T PRK06777 326 LGAHLVEVLE-KAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALE-EGLLLLSCGVHGNVIRFLYPLTI 403 (421)
T ss_pred HHHHHHHHHH-HHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHh-CCeEEeecCCCCCEEEEeCCCCC
Confidence 7778877777 54210 013345677777754 321 12232 33444 699999864 77764 24
Q ss_pred ChhhHHHHHHHHHHHHh
Q 012628 440 SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 440 ~~e~i~~~~~~l~~~~~ 456 (459)
+++++++++++|.+++.
T Consensus 404 ~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 404 PDAQFSKALNILTRLLA 420 (421)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 89999999999998874
No 208
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2e-19 Score=178.23 Aligned_cols=215 Identities=15% Similarity=0.114 Sum_probs=145.7
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh----hhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~G~ 199 (459)
+.....+|++++|++.... ..++ +.+|++++.++ +...+.+||+|+++.|+|......+ ...|+
T Consensus 59 ~~p~~~~Le~~lA~~~g~~-------~~i~---~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi 126 (388)
T PRK07811 59 GNPTRTALEEQLAALEGGA-------YGRA---FSSGMAATDCL--LRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGV 126 (388)
T ss_pred CCccHHHHHHHHHHHhCCC-------ceEE---eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence 5677899999999997543 2344 46778999998 4445789999999999998543332 23576
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++. .|++++++++++ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|.......
T Consensus 127 ~~~~~d~-------~d~e~l~~~i~~---~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~~- 192 (388)
T PRK07811 127 EYTPVDL-------SDLDAVRAAITP---RTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQQ- 192 (388)
T ss_pred EEEEeCC-------CCHHHHHHhcCc---CCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 6666543 489999999875 78899999999999988 888999999999999999999987654321
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
.+ . ....+++.|++|.++.+| .+.||++ ++++++.+++.. .........+...+.++...|+.
T Consensus 193 -----p~----~-~gaDivv~S~sK~l~g~~~~~gG~vv--~~~~~l~~~~~~----~~~~~g~~~s~~~a~l~~~~L~t 256 (388)
T PRK07811 193 -----PL----A-LGADVVVHSTTKYIGGHSDVVGGALV--TNDEELDEAFAF----LQNGAGAVPGPFDAYLTLRGLKT 256 (388)
T ss_pred -----ch----h-hCCcEEEecCceeecCCCCcEEEEEE--ECCHHHHHHHHH----HHHhcCCCCCHHHHHHHHhccCc
Confidence 11 1 123589999999998665 4568873 455664333322 11111212333333333333332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
+....++..++...+.+.|+ +.
T Consensus 257 ----------l~~R~~~~~~na~~la~~L~-~~ 278 (388)
T PRK07811 257 ----------LAVRMDRHSENAEAVAEFLA-GH 278 (388)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-hC
Confidence 34445555667777777777 55
No 209
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.86 E-value=2.8e-19 Score=176.92 Aligned_cols=216 Identities=16% Similarity=0.152 Sum_probs=151.0
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hHHHhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~----~~~~~~~~G~ 199 (459)
+..-..+|++.++++... +++++ +++|+.++.++ +...+.+||+|+++.+.|.. +...++..|+
T Consensus 52 ~~p~~~~le~~la~l~g~--------~~~~~--~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 52 ANPTVAAFEERIAALEGA--------ERAVA--TATGMSAIQAA--LMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence 344578999999998643 34666 89999999988 44457899999999988864 3445677899
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++.. |++.+++++++ +++++++++|+||+|.+ .++++|.++|+++|+++|+|++|.......
T Consensus 120 ~v~~v~~~-------d~~~l~~~i~~---~tklV~le~p~np~g~~---~dl~~I~~la~~~gi~livD~a~~~~~~~~- 185 (380)
T TIGR01325 120 EVSFVDPT-------DLNAWEAAVKP---NTKLVFVETPSNPLGEL---VDIAALAELAHAIGALLVVDNVFATPVLQQ- 185 (380)
T ss_pred EEEEECCC-------CHHHHHHhcCC---CceEEEEECCCCCCCee---eCHHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 98888762 68889888865 68899999999999999 568889999999999999999987543221
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCCh
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 359 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 359 (459)
.+ . ...++++.|+||.++.+|.++|.++ ..+++..+.+...+.. .....+...+.+ ++..-
T Consensus 186 -----pl----~-~g~Divv~S~sK~l~g~g~~~gG~v--v~~~~~~~~l~~~~~~----~g~~~~p~~a~~---~l~~l 246 (380)
T TIGR01325 186 -----PL----K-LGADVVVYSATKHIDGQGRVMGGVI--AGSEELMAEVAVYLRH----TGPAMSPFNAWV---LLKGL 246 (380)
T ss_pred -----ch----h-hCCCEEEeeccceecCCCCeEEEEE--EeCHHHHHHHHHHHHh----hCCCCCHHHHHH---HHhcc
Confidence 11 1 1246888899999998898885542 2366655555443322 111222222222 22221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
+.+....++..+++..+.+.|+ +.+
T Consensus 247 -------~tl~~r~~~~~~~a~~la~~L~-~~p 271 (380)
T TIGR01325 247 -------ETLSLRMQKQFDSALAIAEWLQ-AQP 271 (380)
T ss_pred -------CcHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 2244556667778888888888 764
No 210
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.86 E-value=1.5e-19 Score=178.43 Aligned_cols=216 Identities=18% Similarity=0.115 Sum_probs=152.6
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----hhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~G~ 199 (459)
+.....+|++.++++... ++.++ +++|++|+.++ +...+.+||+|+++.+.|...... ++..|+
T Consensus 38 ~~p~~~~le~~la~l~g~--------~~a~~--~~sG~~Ai~~~--l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 38 GNPTVDALEKKLAALEGG--------EAALA--FSSGMAAISTV--LLALLKAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred CChhHHHHHHHHHHHHCC--------CCEEE--EcCHHHHHHHH--HHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 556678999999998643 34555 68889999998 444578999999999999875543 446788
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
++..++.+ |++.+++++++ +++++++.+|+||||.+ .++++|+++|++||+++|+|++|.......
T Consensus 106 ~~~~v~~~-------d~~~l~~~i~~---~~~~v~~e~~~np~g~~---~dl~~i~~la~~~g~~livD~t~~~~~~~~- 171 (369)
T cd00614 106 EVTFVDPD-------DPEALEAAIKP---ETKLVYVESPTNPTLKV---VDIEAIAELAHEHGALLVVDNTFATPYLQR- 171 (369)
T ss_pred EEEEeCCC-------CHHHHHHhcCC---CCeEEEEECCCCCCCee---cCHHHHHHHHHHcCCEEEEECCCcchhcCC-
Confidence 88877652 58899988875 67888899999999999 457889999999999999999986544211
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
.+ ..+.++++.|+||.++.+| .+.||+++ .+++..+++...... .....+...+.++...|+.
T Consensus 172 -----~~-----~~g~Divv~S~tK~l~g~~~~~gG~v~~--~~~~l~~~l~~~~~~----~g~~~~p~~a~~~l~~l~t 235 (369)
T cd00614 172 -----PL-----ELGADIVVHSATKYIGGHSDVIAGVVVG--SGEALIQRLRFLRLA----LGTILSPFDAWLLLRGLKT 235 (369)
T ss_pred -----hh-----hhCCcEEEeccceeccCCCCceEEEEEe--CcHHHHHHHHHHHHh----hCCCCCHHHHHHHHcCCCC
Confidence 11 1234688999999998766 77888844 333655555443221 1223444444444333332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
+....++..++.+.+.+.|+ +.+
T Consensus 236 ----------l~~r~~~~~~na~~la~~L~-~~~ 258 (369)
T cd00614 236 ----------LPLRMERHSENALKVAEFLE-KHP 258 (369)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-cCC
Confidence 23455666778888888888 764
No 211
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=2.5e-19 Score=176.70 Aligned_cols=196 Identities=15% Similarity=0.077 Sum_probs=139.6
Q ss_pred ccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHH-hCCCC
Q 012628 100 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGA 178 (459)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~-~~~gd 178 (459)
|.+.+...+++.+.+..+.. +....-..++.+.+++++ + .+++++ |+|||+++.++. ... +.|||
T Consensus 7 p~~~~~e~~a~~~~~~~~~~--~~~g~~~~~~e~~la~~~----g----~~~~v~--~~sgt~aL~~~l--~al~~~pGd 72 (376)
T TIGR02379 7 PPVTGQELEYIAEAISEGKL--SGDGPFSRRCETWLENRT----G----TKKALL--TPSCTAALEMAA--LLLDIQPGD 72 (376)
T ss_pred CCCCHHHHHHHHHHHHcCCc--cCCcHHHHHHHHHHHHHh----C----CCeEEE--eCCHHHHHHHHH--HHcCCCCcC
Confidence 33467778888888865431 211112345555555553 2 467888 999999999873 333 56999
Q ss_pred EEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 012628 179 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 258 (459)
Q Consensus 179 ~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~ 258 (459)
+|++++|+|..+...+...|++++.++++ ++++.+|++.+++++++ ++++++ |+||+|.. .++++|.++|
T Consensus 73 ~Viv~~~t~~~~~~~~~~~G~~~v~vd~d-~~~~~~d~~~le~~i~~---~tk~Ii---p~~~~G~~---~d~~~I~~la 142 (376)
T TIGR02379 73 EVIMPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIESAITH---RTKAIV---PVHYAGVA---CDMDTIMALA 142 (376)
T ss_pred EEEECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCCCHHHHHHhcCc---CceEEE---EeCCCCCc---cCHHHHHHHH
Confidence 99999999999999999999999999995 45678999999999875 677776 68899998 4577899999
Q ss_pred HhcCCeeEEeccCCCCC-CCCCCCChhHHHHHHhcCCeEEEEEcC--CcCcccCCCCcceEEEEeCChhHHHHHHHH
Q 012628 259 QEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKSQ 332 (459)
Q Consensus 259 ~~~~~~ii~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~ 332 (459)
++||++||+|++|.... +.+. .+ ... ..+.+.|| +|.+. +|.+.|++ ++.++++.+++...
T Consensus 143 ~~~~i~vIeDaa~~~g~~~~~~-----~~----g~~-~~~~~fSf~~~K~l~-~g~~gG~v--~~~~~~~~~~~~~~ 206 (376)
T TIGR02379 143 NKHQLFVIEDAAQGVMSTYKGR-----AL----GSI-GHLGTFSFHETKNYT-SGGEGGAL--LINDQAFIERAEII 206 (376)
T ss_pred HHCCCEEEEECccccCCccCCc-----cc----CCC-CCEEEEeCCCCCcCc-ccCCceEE--EECCHHHHHHHHHH
Confidence 99999999999976554 3221 11 111 12333343 47786 67778998 56778866666544
No 212
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.86 E-value=1.9e-19 Score=179.17 Aligned_cols=216 Identities=17% Similarity=0.118 Sum_probs=147.1
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~G~ 199 (459)
+.....+|+++++++.... . .++ +++|+.++.++ +...+.+||+|+++.|+|... ...++..|+
T Consensus 63 ~~p~~~~le~~lA~l~g~~-------~-~i~--~~sG~~Al~~~--l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~ 130 (403)
T PRK07503 63 SNPTLALLEQRMASLEGGE-------A-AVA--LASGMGAITAT--LWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGV 130 (403)
T ss_pred CCchHHHHHHHHHHHhCCC-------c-EEE--EcCHHHHHHHH--HHHHcCCCCEEEEccCccchHHHHHHHHHhhCCE
Confidence 4456789999999986542 3 344 57889999888 444578999999999988653 344567899
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++.. |++.+++++++ +++++++++|+||||.+ .++++|+++|+++|+++|+|++|.......
T Consensus 131 ~v~~vd~~-------d~~~l~~~i~~---~tklV~le~p~NPtG~~---~di~~I~~la~~~gi~lIvD~a~a~~~~~~- 196 (403)
T PRK07503 131 TVRHVDLT-------DPAALKAAISD---KTRMVYFETPANPNMRL---VDIAAVAEIAHGAGAKVVVDNTYCTPYLQR- 196 (403)
T ss_pred EEEEeCCC-------CHHHHHHhcCc---cCcEEEEeCCCCCCCee---eCHHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 88888762 68999998875 67888889999999999 567889999999999999999987543211
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
.+ . ...++++.|+||.++.+| .|.|+++ .+++..+++..... ........+.+.+.++..-|+
T Consensus 197 -----~l----~-~g~Di~v~S~tK~l~g~gd~~gG~v~---~~~~l~~~l~~~~~--~~~~g~~~s~~~a~l~l~~L~- 260 (403)
T PRK07503 197 -----PL----E-LGADLVVHSATKYLGGHGDITAGLVV---GGKALADRIRLEGL--KDMTGAVMSPFDAFLLMRGLK- 260 (403)
T ss_pred -----ch----h-hCCCEEEccccccccCCCceeEEEEE---cCHHHHHHHHhhhH--HhCcCCCCCHHHHHHHHcCcc-
Confidence 11 1 134588999999999776 6677764 37775555542111 111122344444444333232
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
.+....++..++...+.+.|+ +.
T Consensus 261 ---------tl~~r~~~~~~na~~~a~~L~-~~ 283 (403)
T PRK07503 261 ---------TLALRMDRHCASAQAVAEWLA-RH 283 (403)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHH-hC
Confidence 233344444566666677776 54
No 213
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.86 E-value=6.6e-19 Score=176.21 Aligned_cols=331 Identities=9% Similarity=0.050 Sum_probs=205.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+|+..|..--..|. .+|.|.+++.+.++... ........-..++.+.+++++ + .+.+++ +++|
T Consensus 36 g~~~lD~~s~~~~~~~Gh--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~-------~~~~~~--~~SG 103 (401)
T TIGR01885 36 GKRYLDFLSAYSAVNQGH--CHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF-G-------YDKVLP--MNTG 103 (401)
T ss_pred CCEEEEcccCHhhccCCC--CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc-C-------CCEEEE--eCcc
Confidence 356889988743111122 37899999988875421 111112334456777777764 2 256888 9999
Q ss_pred hhHHHHHHHHHHHh-------CC-CCEEEEcCCCCcch-HHHhhhC---------CC---CeeeeeeecCCCCCCCHHHH
Q 012628 161 TGSLRLAAALIERY-------FP-GAKVLISSPTWGNH-KNIFNDA---------RV---PWSEYRYYDPKTVGLDFEGM 219 (459)
Q Consensus 161 t~a~~l~~~~~~~~-------~~-gd~Vlv~~p~y~~~-~~~~~~~---------G~---~v~~v~~~~~~~~~~d~e~l 219 (459)
++|++.+.++...+ .+ .++|+...-+|... ...+... |. .++.+|. .|++.+
T Consensus 104 s~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 176 (401)
T TIGR01885 104 AEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEAL 176 (401)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHH
Confidence 99999997776543 13 35677777777643 2222222 11 1223332 268999
Q ss_pred HHHHHcCCCCcEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012628 220 IADIKAAPGGSFILLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (459)
Q Consensus 220 ~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~-~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (459)
++.++..+++..++++..+++++|.+.+++ .+++|.++|++||+++|+||+|.+++..+ ..+.. ......++++
T Consensus 177 e~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G---~~~~~-~~~~~~~di~- 251 (401)
T TIGR01885 177 EEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTG---KLLCV-DHENVKPDIV- 251 (401)
T ss_pred HHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHH-hhcCCCCCEE-
Confidence 998875445667778888999999988644 69999999999999999999998876532 12222 1112223433
Q ss_pred EEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 299 AQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 299 ~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
++||.++..|+|+|+++. +++..+ .+.......+.+.+.+++.++...|+.. .+ +...++.++
T Consensus 252 --~~gK~l~~g~~~ig~v~~---~~~i~~----~~~~~~~~~t~~~~p~~~~aa~a~L~~i------~~--~~l~~~~~~ 314 (401)
T TIGR01885 252 --LLGKALSGGVYPVSAVLA---DDDVML----TIKPGEHGSTYGGNPLACAVAVAALEVL------EE--EKLAENAEK 314 (401)
T ss_pred --EeeccccCCCCCcEEEEE---cHHHHh----hccCCCCCCCCCCCHHHHHHHHHHHHHH------Hh--ccHHHHHHH
Confidence 467999976699999866 777433 3332112222234455556655444311 11 134456677
Q ss_pred HHHHHHHHHhhccCCCCCcccccCCcceee-ecCCC------HHHHHHHHhcccEEEcCCC----cEEEc-cCChhhHHH
Q 012628 379 VRQKLFDSLSAKDKSGKDWSFILRQIGMFS-FTGLN------KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEY 446 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~-~~~l~------~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~e~i~~ 446 (459)
+.+++.+.|+ +++.+ -+..+.+.|.++. +++.+ .++..+|.+ +||.+.|.+ ||+.. ..++++|++
T Consensus 315 ~~~~~~~~L~-~l~~~-~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~-~Gv~v~~~~~~~lRi~p~l~~t~~~i~~ 391 (401)
T TIGR01885 315 LGEIFRDQLK-KLPKP-IITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKE-KGLLAKPTHGNIIRLAPPLVITEEQLDE 391 (401)
T ss_pred HHHHHHHHHH-hccCC-ceeEEeecCeeEEEEeccCcchhHHHHHHHHHHh-CCEEEEecCCCEEEEeCCccCCHHHHHH
Confidence 7889999998 87521 1222345566554 34332 234556655 699998875 77754 248999999
Q ss_pred HHHHHHHHHh
Q 012628 447 LADAIIDSYH 456 (459)
Q Consensus 447 ~~~~l~~~~~ 456 (459)
++++|.++++
T Consensus 392 ~l~~l~~~l~ 401 (401)
T TIGR01885 392 GLEIIKKVID 401 (401)
T ss_pred HHHHHHHHhC
Confidence 9999998763
No 214
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.86 E-value=3e-19 Score=181.70 Aligned_cols=330 Identities=12% Similarity=0.056 Sum_probs=203.4
Q ss_pred eecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCC---CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY---LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y---~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
-++.|.+ .+.+ +|.+.+++.+.......+.| ....|..+++..+.+++....|.+ +..+..+.|+++.
T Consensus 72 ~~g~G~~----~~~~-~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~----~~~l~~~~GA~a~ 142 (481)
T PRK04366 72 FYPLGSC----TMKY-NPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD----AVTLQPAAGAHGE 142 (481)
T ss_pred eecCccc----CCCC-CHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC----ceEEEeCcHHHHH
Confidence 3666765 3333 77788877765211123567 346688899998888887776653 3333224444444
Q ss_pred HHHHHHHHH--HhCCCC----EEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCC
Q 012628 164 LRLAAALIE--RYFPGA----KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (459)
Q Consensus 164 ~~l~~~~~~--~~~~gd----~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~ 237 (459)
+..+. ++. ...+|| +|++++|.|+.|...++..|++++.+|+ +.++.+|++.+++++++ +++++++++
T Consensus 143 ~~~l~-~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~--~~~~~~D~e~L~~~i~~---~t~~V~v~~ 216 (481)
T PRK04366 143 LTGLL-MIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS--NEDGLVDLEALKAAVGE---DTAALMLTN 216 (481)
T ss_pred HHHHH-HHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec--CCCCCcCHHHHHhhccc---CCeEEEEeC
Confidence 44321 122 245676 9999999999999999999999999998 34678999999999875 678888889
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC-CCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC----CCC
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY----AER 312 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~R 312 (459)
|| |||.+ .+++++|+++|+++|.++++|+++. .+ .+.. + ....+.+++++|.+|.++.| |-.
T Consensus 217 Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g~~--~-------~~~~GaD~~~~~~hK~l~~P~g~Ggp~ 283 (481)
T PRK04366 217 PN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANL-NAILGKA--R-------PGDMGFDVVHLNLHKTFSTPHGGGGPG 283 (481)
T ss_pred CC-Ccccc--chHHHHHHHHHHHcCCEEEEEecCh-hhhcccC--C-------ccccCCCEEEEechhhcCCCCCCCCCC
Confidence 88 99965 3589999999999999999999953 22 1100 0 12234678899999988644 344
Q ss_pred cceEEEEeCChhHHHHHHHHHH--h-------h------ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Q 012628 313 IGAMNVVCSSSDLAARVKSQLK--R-------L------ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIK 377 (459)
Q Consensus 313 iG~~~~v~~~~~~~~~~~~~~~--~-------~------~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (459)
+|++.+ .+++.+.+...+. . . .+......+.....++...+..-+ .+.++++.++..
T Consensus 284 ~G~l~~---~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G-----~~Gl~~~a~~~~ 355 (481)
T PRK04366 284 SGPVGV---KEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLG-----AEGLREVSEDAV 355 (481)
T ss_pred eeeeee---hhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHH-----HHHHHHHHHHHH
Confidence 678755 4443332210000 0 0 000000111122222222221101 244667777888
Q ss_pred HHHHHHHHHHhhccCCCCCcccccCCcceeee--c-----CCCHH-HHHHHHhcccEEEc-------CCC--cEEEccC-
Q 012628 378 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF--T-----GLNKA-QSDNMTNKWHVYMT-------KDG--RISLAGL- 439 (459)
Q Consensus 378 ~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~--~-----~l~~~-~~~~ll~~~gI~v~-------~gg--Ris~~~~- 439 (459)
.+.+++.+.|+ ++ +. +.+..+...-|++ . +.+.. ..++|.+ +||.+. ..+ |+|++..
T Consensus 356 ~~a~~l~~~L~-~~-~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~-~Gi~~~~~~~p~~~~~~l~is~~e~~ 430 (481)
T PRK04366 356 LNANYLKARLK-DI-YD--LPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLD-YGFHPPTIYFPLIVPEALMIEPTETE 430 (481)
T ss_pred HHHHHHHHHhH-hh-Cc--ccCCCCeeEEEEEECccccccCCCHHHHHHHHHH-CCccCCccccccccCCeEEEcccCCC
Confidence 88999999998 75 10 1211111111222 1 23444 4556665 698764 123 7887644
Q ss_pred ChhhHHHHHHHHHHHHhh
Q 012628 440 SLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 440 ~~e~i~~~~~~l~~~~~~ 457 (459)
++++|+.++++|.++.++
T Consensus 431 t~edid~l~~~l~~i~~~ 448 (481)
T PRK04366 431 SKETLDAFIAAMKQIAEE 448 (481)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 789999999999998765
No 215
>PRK07505 hypothetical protein; Provisional
Probab=99.86 E-value=9.2e-19 Score=175.21 Aligned_cols=323 Identities=11% Similarity=0.049 Sum_probs=183.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc-C-CCCCC----CCCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-ENKEY----LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-~~~~Y----~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+...+|++...++ +. .-+|+|.+++.+.++. + ..... ...+...++++.+++++. .+.+++
T Consensus 45 g~~~ld~~s~~~l---gl-~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~~~~- 111 (402)
T PRK07505 45 GHTFVNFVSCSYL---GL-DTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFG--------ASVLTF- 111 (402)
T ss_pred CceEEEeecCCcc---CC-CCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhC--------CCEEEE-
Confidence 3567898765442 32 2378899999888754 1 11111 123345677777777752 133444
Q ss_pred ecccchhHHHHHHHHHHH-h-CCCC-EEEEcCCCCcchH---HHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCC
Q 012628 156 QGLSGTGSLRLAAALIER-Y-FPGA-KVLISSPTWGNHK---NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~-~-~~gd-~Vlv~~p~y~~~~---~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 229 (459)
++|++++..+.+++.. + .+|+ .|++.+..|.+-. ......+.+++.+|. .|++.+++.+++ +
T Consensus 112 --~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~---~ 179 (402)
T PRK07505 112 --TSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKT---N 179 (402)
T ss_pred --CChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhc---C
Confidence 5667788877555432 2 2233 4667775553321 111223456666665 378999998875 4
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh-cCCeEEEEEcCCcCccc
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGL 308 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~ 308 (459)
++++++++|+||||.+++ +++|.++|++||+++|+||+|...+++.. ........+.. ..+++++++||||.|++
T Consensus 180 ~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~-g~~~~~~~~~~~~~d~~i~~~s~sK~~~~ 255 (402)
T PRK07505 180 KTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKN-GEGYVRSELDYRLNERTIIAASLGKAFGA 255 (402)
T ss_pred CCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCC-CCchHHHHcCCCCCCCeEEEEechhhhhc
Confidence 567777899999999976 67788899999999999999754433321 11122222211 34678999999999997
Q ss_pred CCCCcceEEEEeCChhHHHHHHHHHHhhcc-cccc-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 309 YAERIGAMNVVCSSSDLAARVKSQLKRLAR-PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 386 (459)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (459)
+| ||+ ++.+++..+.+. .... .+++ +++..++.++...++- .. ++.+.+..+.++++.+.+.+.
T Consensus 256 ~G---g~~--~~~~~~~~~~~~----~~~~~~t~~~~~~~~a~aa~~a~l~~--~~---~~~~~~~~~~l~~~~~~~~~~ 321 (402)
T PRK07505 256 SG---GVI--MLGDAEQIELIL----RYAGPLAFSQSLNVAALGAILASAEI--HL---SEELDQLQQKLQNNIALFDSL 321 (402)
T ss_pred cC---eEE--EeCCHHHHHHHH----HhCCCceeCCCCCHHHHHHHHHHHHH--Hh---ccCcHHHHHHHHHHHHHHHHH
Confidence 76 886 345666444443 2222 2222 3333444444333320 00 111233344444444433322
Q ss_pred HhhccCCCCCcccccCCcceeeec--CC---CHHHHHHHHhcccEEEcCC-------C----cEEEcc-CChhhHHHHHH
Q 012628 387 LSAKDKSGKDWSFILRQIGMFSFT--GL---NKAQSDNMTNKWHVYMTKD-------G----RISLAG-LSLAKCEYLAD 449 (459)
Q Consensus 387 L~~~~g~~~~~~~~~~~~g~f~~~--~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~-~~~e~i~~~~~ 449 (459)
+. .. ....+.++.++ +. ..++.++|++ +||.+.+. + ||+++. .++|+++++++
T Consensus 322 ~~-~~--------~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~ 391 (402)
T PRK07505 322 IP-TE--------QSGSFLPIRLIYIGDEDTAIKAAKQLLD-RGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCS 391 (402)
T ss_pred HH-hc--------CCCCCCCEEEEEeCCHHHHHHHHHHHHH-CCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHH
Confidence 22 10 01111111122 21 2345667775 59999753 2 888763 28999999999
Q ss_pred HHHHHHhh
Q 012628 450 AIIDSYHN 457 (459)
Q Consensus 450 ~l~~~~~~ 457 (459)
+|.+++++
T Consensus 392 ~l~~~l~~ 399 (402)
T PRK07505 392 LLKEILDE 399 (402)
T ss_pred HHHHHHHh
Confidence 99998864
No 216
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=6.7e-19 Score=174.62 Aligned_cols=215 Identities=13% Similarity=0.088 Sum_probs=148.1
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----HhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----IFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~G~ 199 (459)
+.....+|++.++++.. .+++++ ++||++|+.++ +...+.+||+|++++|+|..+.. .++..|+
T Consensus 63 ~~pt~~~Le~~lA~l~g--------~~~~l~--~~sgt~Ai~~~--l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 63 ATPTSLALAQRLAEIEG--------GRHALL--QPSGLAAISLV--YFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGI 130 (394)
T ss_pred CCHHHHHHHHHHHHHhC--------CCeEEE--eccHHHHHHHH--HHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence 55567889999998853 257888 99999999998 44457899999999999998664 4567898
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++.. +.+.+++++++ +++++++++|+||+|.. .++++|+++|+++|+++|+|++|......
T Consensus 131 ~v~~vd~~-------~~~~l~~~i~~---~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~~-- 195 (394)
T PRK07050 131 TVRFYDPL-------IGAGIADLIQP---NTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLAF-- 195 (394)
T ss_pred EEEEECCC-------CHHHHHHhcCC---CCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCccccccc--
Confidence 88887641 34678888775 78899999999999876 99999999999999999999998654321
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCccc-CCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
. ++ . .+.++++.|++|.++- .+.+.|++ ++.+++..+++..... ....+.+...+..+...|.+
T Consensus 196 --~--~l----~-~GaDi~v~S~tK~~~g~~~~~gG~v--~~~~~~~~~~~~~~~~----~~G~~~~~~~a~l~lr~l~t 260 (394)
T PRK07050 196 --K--PF----E-HGVDISVQALTKYQSGGSDVLMGAT--ITADAELHAKLKLARM----RLGIGVSADDCSLVLRGLPS 260 (394)
T ss_pred --C--HH----H-cCCeEEEEECCceecCCCCeeEEEE--EECCHHHHHHHHHHHH----hcCCCCCHHHHHHHHcCCCc
Confidence 0 11 1 1347889999999962 33457877 4567775555443222 22224444444444333332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
+....++..++...+.+.|+ +.
T Consensus 261 ----------l~~Rl~~~~~~a~~la~~L~-~~ 282 (394)
T PRK07050 261 ----------LQVRLAAHDRSALEVAEWLK-AR 282 (394)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-hC
Confidence 22334444445556666666 44
No 217
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.85 E-value=4e-19 Score=176.60 Aligned_cols=214 Identities=9% Similarity=0.023 Sum_probs=149.6
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCC----cchHHHhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW----GNHKNIFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y----~~~~~~~~~~G~ 199 (459)
+.....+|++.+|++... ++.++ +++|+.++..+ +...+.+||+|+++...| ..+...++..|+
T Consensus 68 ~~p~~~~le~~lA~l~g~--------~~al~--~~sG~~Ai~~~--l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~ 135 (403)
T PRK07810 68 GNPTVSMFEERLRLIEGA--------EACFA--TASGMSAVFTA--LGALLGAGDRLVAARSLFGSCFVVCNEILPRWGV 135 (403)
T ss_pred CCchHHHHHHHHHHHhCC--------CcEEE--ECChHHHHHHH--HHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence 455678999999999643 34556 79999999887 445578999999988554 445566778899
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++. .|++++++++++ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|.......
T Consensus 136 ~v~~vd~-------~d~~~l~~ai~~---~tklV~~esp~Nptg~v---~dl~~I~~la~~~g~~vivD~a~a~~~~~~- 201 (403)
T PRK07810 136 ETVFVDG-------EDLSQWEEALSV---PTQAVFFETPSNPMQSL---VDIAAVSELAHAAGAKVVLDNVFATPLLQR- 201 (403)
T ss_pred EEEEECC-------CCHHHHHHhcCc---CceEEEEECCCCCCCee---cCHHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 9988864 288999999876 78899999999999999 468889999999999999999987544321
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCc-ceEEEEeCChhHHH-HHHHHHHhhccccccCCchHHHHHHHHHhC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERI-GAMNVVCSSSDLAA-RVKSQLKRLARPMYSNPPVHGARIVANVVG 357 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 357 (459)
++ ..+.++++.|++|.++.+|.++ |+++ + +++.+. .+..... ......+...+.++..-|+
T Consensus 202 -----~~-----~~gaDivv~S~tK~l~g~g~~~gG~v~--~-~~~~~~~~l~~~~~----~~g~~~s~~~a~l~l~~L~ 264 (403)
T PRK07810 202 -----GL-----PLGADVVVYSGTKHIDGQGRVLGGAIL--G-DREYIDGPVQKLMR----HTGPALSAFNAWVLLKGLE 264 (403)
T ss_pred -----hh-----hcCCcEEEccCCceecCCcCceeEEEE--e-ChHHHHHHHHHHHH----HhCCCCCHHHHHHHHhccC
Confidence 11 1134688999999999899998 5543 2 555333 2322212 2222445544444444333
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 358 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
. +....++..++...+.+.|+ +.
T Consensus 265 t----------l~~R~~~~~~~a~~~a~~L~-~~ 287 (403)
T PRK07810 265 T----------LALRVRHSNASALRIAEFLE-GH 287 (403)
T ss_pred c----------HHHHHHHHHHHHHHHHHHHh-cC
Confidence 2 34555566666666777777 54
No 218
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=1.5e-18 Score=174.39 Aligned_cols=341 Identities=14% Similarity=0.055 Sum_probs=198.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC--CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|.--..-|+. +|.|.+++.+.+++... ..|.......++-+.+++..... -+.+.+ +++
T Consensus 40 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~------~~~v~f--~~s 109 (443)
T PRK08360 40 GNEYIDFLSDAAVQNVGHN--NPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGD------NPKVSF--GLS 109 (443)
T ss_pred CCEEEEccccHhhcccCCC--CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCC------CCEEEE--cCC
Confidence 3578898888543333443 78899999888865211 11212222234444444443211 257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HhhhCC------------CCeeeeeeecCCC--CC--------CCH
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKT--VG--------LDF 216 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~-~~~~~G------------~~v~~v~~~~~~~--~~--------~d~ 216 (459)
|++|++.+.++...+....+|+...-+|.+... .+...| ..+..+|..+... +. -++
T Consensus 110 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08360 110 GSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV 189 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH
Confidence 999999999887766656788888888866431 111111 1133343311100 10 124
Q ss_pred HHHHHHHHc--CCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012628 217 EGMIADIKA--APGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (459)
Q Consensus 217 e~l~~~i~~--~~~~~~~ii~~~p~NPTG~~~s-~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (459)
+.+++.+.. .+++...+++...+||+|.+++ ++.+++|.++|++||+++|+||+|.+++..+ ..+....+ +..
T Consensus 190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G---~~~a~~~~-~~~ 265 (443)
T PRK08360 190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTG---KWFAIEHF-GVE 265 (443)
T ss_pred HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---cchhhhhc-CCC
Confidence 456666653 1245777777767899999887 5579999999999999999999999887542 22222222 333
Q ss_pred CeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHH
Q 012628 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 373 (459)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 373 (459)
++++ ++||.++ +|+|+||+++ +++..+. +.......+.+.+.+++.++...|+.- ++ +...
T Consensus 266 pDii---tlsK~l~-~G~pigav~~---~~~i~~~----~~~~~~~~T~~~~p~~~aaa~a~l~~l------~~--~~l~ 326 (443)
T PRK08360 266 PDII---TLGKPLG-GGLPISATIG---RAEIMDS----LPPLAHAFTLSGNPVASAAALAVIEEI------EE--KNLL 326 (443)
T ss_pred CCEE---Eeccccc-CCceeEEEEE---cHHHHhh----hcCCCCCCCCCcCHHHHHHHHHHHHHH------HH--cCHH
Confidence 4443 7799999 8999999866 7774433 332222223344555566665554311 00 1234
Q ss_pred HHHHHHHHHHHHHHhhcc--CCCCCcccccCCcceeee--cCC------C----HHHHHHHHhcccEEEcCC-C---cEE
Q 012628 374 GRIKNVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSF--TGL------N----KAQSDNMTNKWHVYMTKD-G---RIS 435 (459)
Q Consensus 374 ~~~~~~~~~l~~~L~~~~--g~~~~~~~~~~~~g~f~~--~~l------~----~~~~~~ll~~~gI~v~~g-g---Ris 435 (459)
++.+++-+++.+.|+ ++ ..|- +..+...|-++.. ..- + ..+...+++ +||.+.+. + |++
T Consensus 327 ~~~~~~g~~l~~~L~-~l~~~~~~-v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~~~lr~~ 403 (443)
T PRK08360 327 KRAEKLGNYTKKRLE-EMKKKHEL-IGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTFFSGNVLRIQ 403 (443)
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCC-eeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHH-CCeEEeecCCCEEEEe
Confidence 455555555555554 33 1110 1223334333321 110 1 133455555 69998753 3 774
Q ss_pred Ecc-CChhhHHHHHHHHHHHHhhc
Q 012628 436 LAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 436 ~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
.+. .++++++++++++.++++.+
T Consensus 404 P~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 404 PPLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 332 29999999999999998764
No 219
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=8.4e-19 Score=172.77 Aligned_cols=216 Identities=10% Similarity=0.026 Sum_probs=148.1
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----hhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~G~ 199 (459)
+......|++++|++.. .+++++ ++||++++.++ +...+.+||+|+++.|+|...... ....|+
T Consensus 51 ~npt~~~Le~~lA~leg--------~e~ivv--t~gg~~Ai~~~--l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi 118 (388)
T PRK08861 51 GNPNRGLLEQTLSELES--------GKGAVV--TNCGTSALNLW--VSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDF 118 (388)
T ss_pred CCchHHHHHHHHHHHhC--------CCeEEE--ECCHHHHHHHH--HHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCe
Confidence 45567899999999964 367888 99999999998 444578999999999999864333 234466
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++. .|++.+++++++ +++++++++|+||||.+++ +++|.++|+++|+++|+|++|.......
T Consensus 119 ~v~~vd~-------~d~e~l~~~i~~---~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~~- 184 (388)
T PRK08861 119 KVQFVDQ-------SDAAALDAALAK---KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQK- 184 (388)
T ss_pred EEEEECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccCC-
Confidence 7666642 488999988875 7889999999999999965 5678888999999999999987643221
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccC-CCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
.+ ..+-++++.|++|.++-+ +...|+++ +.+++..+++.. +.. ......+...+..+..-|+.
T Consensus 185 -----pl-----~~GaDivv~S~tK~l~G~~d~~gG~i~--~~~~~~~~~~~~-~~~---~~G~~~~p~~a~l~~rgl~T 248 (388)
T PRK08861 185 -----PL-----ELGADFVIHSTTKYINGHSDVIGGVLI--TKTKEHAEELAW-WGN---CIGATGTPFDSYMTLRGIRT 248 (388)
T ss_pred -----Cc-----ccCCCEEEeecceeccCCCcceeEEEE--ecHHHHHHHHHH-HHh---ccCCCCChHHHHHHHhcCCC
Confidence 11 113468999999998743 46677773 445554444332 121 22223344444444333333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
+..+.++..+....+.+.|+ ..+
T Consensus 249 ----------l~lR~~~~~~~a~~~a~~L~-~~p 271 (388)
T PRK08861 249 ----------LGARMRVHEESAQQILAYLQ-TQS 271 (388)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-hCC
Confidence 34455666667777777777 553
No 220
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.85 E-value=2.3e-18 Score=166.73 Aligned_cols=323 Identities=14% Similarity=0.114 Sum_probs=216.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc-C-----CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-G-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~-----~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+..++||+...|+ +... .|.+++++.+.+++ + ...-++...-..+|.+.+|+|+.. +.-+++
T Consensus 38 ~~~~~nf~SNdYL---GLa~-~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~-------e~al~f- 105 (388)
T COG0156 38 GRKVLNFCSNDYL---GLAS-HPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA-------EAALLF- 105 (388)
T ss_pred CceeEeeeccCcc---cccC-CHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-------CcEEEE-
Confidence 4679999999885 3332 67788888887754 1 112244455567899999999644 344555
Q ss_pred ecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC---CCcEE
Q 012628 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP---GGSFI 232 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~---~~~~~ 232 (459)
.+|=.|+..+ +-+.+.++|.|+...-.+.....-++..+++++.+.. .|++.|++.+++.+ .+.++
T Consensus 106 --~SGy~AN~~~--i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~ 174 (388)
T COG0156 106 --SSGFVANLGL--LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKL 174 (388)
T ss_pred --cccchhHHHH--HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceE
Confidence 4444455444 3444668999999999998888889999999999876 37889998887621 13577
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH-HH-HhcCCeEEEEEcCCcCcccCC
Q 012628 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR-LF-ATRGMELLVAQSYSKNLGLYA 310 (459)
Q Consensus 233 ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~-~~-~~~~~~~i~~~S~SK~~~~~G 310 (459)
|++...-.-.|.+ .++++|++++++|+.++++||+|.-..+++ ....+. .+ +...+.+++++||||.||..|
T Consensus 175 IvtegVfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~---~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G 248 (388)
T COG0156 175 IVTEGVFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGP---NGRGLAEHFGLEPEEVDIIVGTLGKALGSSG 248 (388)
T ss_pred EEEeccccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCC---CCccHHHHhCCCCccceEEEEEchhhhcccC
Confidence 7778888888999 899999999999999999999987666653 112222 22 122345899999999999776
Q ss_pred CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 012628 311 ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK 390 (459)
Q Consensus 311 ~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 390 (459)
||+.+ +....+.++......... +.-||..+ .++...|+ . .+.-...+++++++...+.+.++ .
T Consensus 249 ---g~v~g---~~~~~d~L~~~ar~~ifS-talpP~~a-aa~~~al~---~----l~~~~~~r~~L~~~~~~~~~~~~-~ 312 (388)
T COG0156 249 ---GYIAG---SAALIDYLRNRARPFIFS-TALPPAVA-AAALAALR---I----LEEGPERRERLQELAAFFRSLLK-A 312 (388)
T ss_pred ---ceeeC---cHHHHHHHHHhCCceecc-CCCCHHHH-HHHHHHHH---H----HHhCHHHHHHHHHHHHHHHHHHH-h
Confidence 77644 999776666654443322 22233332 12222221 1 11124667777778888876666 6
Q ss_pred cCCCCCcccccCCccee-eecCC---CHHHHHHHHhcccEEEcCC-------C----cEEEccC-ChhhHHHHHHHHHHH
Q 012628 391 DKSGKDWSFILRQIGMF-SFTGL---NKAQSDNMTNKWHVYMTKD-------G----RISLAGL-SLAKCEYLADAIIDS 454 (459)
Q Consensus 391 ~g~~~~~~~~~~~~g~f-~~~~l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~~-~~e~i~~~~~~l~~~ 454 (459)
.+ +...+....+. +.+|. ..+....|+++ ||++.+- | |++++.. ++++|+.+++++.++
T Consensus 313 ~~----~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 313 LG----LVLLPSESPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred cC----CccCCCCCCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 66 34434444433 33454 23556788887 9988653 3 8887654 899999999998775
No 221
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.1e-18 Score=172.43 Aligned_cols=215 Identities=16% Similarity=0.115 Sum_probs=145.5
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh---hCCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN---DARVP 200 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~---~~G~~ 200 (459)
......+|++.+|+++.. +++++ +++|+.|+..+ +...+.+||+|+++.|+|..+...++ ..|++
T Consensus 51 ~np~~~~lE~~lA~l~g~--------~~~l~--~~sG~~Ai~~~--l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~ 118 (385)
T PRK08574 51 ENPTLRPLEEALAKLEGG--------VDALA--FNSGMAAISTL--FFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVK 118 (385)
T ss_pred CCccHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcE
Confidence 345678999999999643 45666 78999999988 55558899999999999998776664 45666
Q ss_pred eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012628 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (459)
Q Consensus 201 v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~ 280 (459)
++.++ +|++.+++++++ .+++++++++|+||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 119 v~~~~--------~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~--- 182 (385)
T PRK08574 119 VVLAY--------PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY--- 182 (385)
T ss_pred EEEEC--------CCHHHHHHhcCc--cCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC---
Confidence 55432 367889888864 26788889999999999965 678999999999999999997432211
Q ss_pred CChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcce-EEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCCh
Q 012628 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA-MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP 359 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 359 (459)
. .+ ..+.++++.|+||.++.+|-.+|. + ++.+++..+++..... ......+...+..+..-|+.
T Consensus 183 -~--~l-----~~GaDivv~S~sK~l~g~~d~~gG~v--i~~~~~~~~~~~~~~~----~~g~~~~p~~a~l~l~~l~t- 247 (385)
T PRK08574 183 -R--PL-----RHGADFVVHSLTKYIAGHNDVVGGVA--VAWSGEFLEELWEWRR----RLGTIMQPFEAYLVLRGLKT- 247 (385)
T ss_pred -C--hh-----hhCCcEEEeeCceeecCCCCceeEEE--EECcHHHHHHHHHHHH----hcCCCCCHHHHHHHHcccCc-
Confidence 1 11 123578999999999877776644 5 3566775555443222 11223333333333322222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
+....++..++...+.+.|+ ..
T Consensus 248 ---------L~~R~~~~~~na~~la~~L~-~~ 269 (385)
T PRK08574 248 ---------LEVRFERQCRNAMAIAEFLS-EH 269 (385)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHH-cC
Confidence 33444555556677777776 54
No 222
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.84 E-value=1.1e-18 Score=174.95 Aligned_cols=328 Identities=16% Similarity=0.088 Sum_probs=194.2
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhc---CCC-CCCC---CCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER---GEN-KEYL---PIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~---~~~-~~Y~---~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
++++.|..+.- + + +|+.+.+++.+++.. ... ..+. ......+.++.+ ++++. ++++|++
T Consensus 26 ~~~iyld~~a~----g-~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~------~~~~v~~- 91 (406)
T TIGR01814 26 NAVIYLDGNSL----G-L-MPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGA------KEDEVVV- 91 (406)
T ss_pred CCcEEecCCCc----C-c-CcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCC------CCCcEEE-
Confidence 34566664432 3 3 488888888876632 100 1111 101112222333 34332 3789999
Q ss_pred ecccchhHHHHHHHHHHHhCCC---CEEEEcCCCCcch----HHHhhhCCCCe----eeeeeecCCCCCCCHHHHHHHHH
Q 012628 156 QGLSGTGSLRLAAALIERYFPG---AKVLISSPTWGNH----KNIFNDARVPW----SEYRYYDPKTVGLDFEGMIADIK 224 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~~g---d~Vlv~~p~y~~~----~~~~~~~G~~v----~~v~~~~~~~~~~d~e~l~~~i~ 224 (459)
|.|+|+++++++.. .+.+| +.|++....|+.. ...++..|+++ +.++. ++++.+|++.+++.++
T Consensus 92 -~~~~t~~l~~~~~~--~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~ 166 (406)
T TIGR01814 92 -MNTLTINLHLLLAS--FYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIE 166 (406)
T ss_pred -eCCchHHHHHHHHH--hcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHH
Confidence 99999999997433 24554 3688888888763 22345678887 35554 3456789999999886
Q ss_pred cCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCc
Q 012628 225 AAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSK 304 (459)
Q Consensus 225 ~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 304 (459)
...++++++++++++|.||.+ .++++|+++|+++|+++++|++ |.++.-+.+ +...+.++++.|.+|
T Consensus 167 ~~~~~t~lv~~~~v~~~tG~~---~~~~~i~~~~~~~g~~~~vD~a-q~~G~~~id---------~~~~gvD~~~~s~hK 233 (406)
T TIGR01814 167 KNGDDIAVILLSGVQYYTGQL---FDMAAITRAAHAKGALVGFDLA-HAVGNVPLD---------LHDWGVDFACWCTYK 233 (406)
T ss_pred hcCCCeEEEEEecccccccee---cCHHHHHHHHHHcCCEEEEEcc-cccCCcccc---------cccCCCCEEEEcCcc
Confidence 444578999999999999999 5688899999999999999999 666643221 223356789999999
Q ss_pred Cc-ccCCCCcceEEEEeCChhHHHHHHHHHHhh-------------------ccccccCCchHHHHHHHHHhCChhhHHH
Q 012628 305 NL-GLYAERIGAMNVVCSSSDLAARVKSQLKRL-------------------ARPMYSNPPVHGARIVANVVGNPALFDE 364 (459)
Q Consensus 305 ~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 364 (459)
.+ |.|| |++++ . ++. ...+....... .+...++++..+..++...|+ +..
T Consensus 234 ~l~g~pG---~~l~v-~-~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~---~~~- 303 (406)
T TIGR01814 234 YLNAGPG---AGAFV-H-EKH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLD---IFD- 303 (406)
T ss_pred ccCCCCC---eEEEE-e-hhh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHH---HHH-
Confidence 87 4455 43433 2 222 11111100000 000012233333222222221 110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCcccccC-----Ccceeee-cCCCHHH-HHHHHhcccEEEcCC--C--
Q 012628 365 WKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILR-----QIGMFSF-TGLNKAQ-SDNMTNKWHVYMTKD--G-- 432 (459)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~-----~~g~f~~-~~l~~~~-~~~ll~~~gI~v~~g--g-- 432 (459)
...+++++++.+++.+++.+.|+ ++ |...++++..+ .+++..+ ...+.+. .+.|. ++||.+... +
T Consensus 304 -~~g~~~i~~~~~~l~~~l~~~l~-~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~-~~gi~v~~~~~~~i 380 (406)
T TIGR01814 304 -QAGMEALRKKSLLLTDYLEELIK-ARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALI-KRGVIGDKREPSVI 380 (406)
T ss_pred -hcCHHHHHHHHHHHHHHHHHHHH-hhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHH-HCCEEEeccCCCeE
Confidence 12257788888899999999887 64 20111333333 1334332 2234444 45554 469988653 2
Q ss_pred cEEEc-cC-ChhhHHHHHHHHHHHH
Q 012628 433 RISLA-GL-SLAKCEYLADAIIDSY 455 (459)
Q Consensus 433 Ris~~-~~-~~e~i~~~~~~l~~~~ 455 (459)
|||++ .+ +++||++++++|++++
T Consensus 381 RiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 381 RVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EEechhccCCHHHHHHHHHHHHHHh
Confidence 99984 34 8899999999998875
No 223
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.84 E-value=1.2e-18 Score=170.84 Aligned_cols=277 Identities=17% Similarity=0.158 Sum_probs=178.7
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeee
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~ 203 (459)
+.....+|++++|++.. .+++++ ++||++|+.++ + ..+.+||+|+++.+.|..-...+.....+. .
T Consensus 52 ~~p~~~~le~~lA~leg--------~~~~v~--~~sG~aAi~~~--l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~ 117 (364)
T PRK07269 52 KNPTRAKLEETLAAIES--------ADYALA--TSSGMSAIVLA--F-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEG-R 117 (364)
T ss_pred CCccHHHHHHHHHHHhC--------CCeEEE--eCCHHHHHHHH--H-HHhCCCCEEEEecCCcCchHHHHHHHHhcC-c
Confidence 45667899999999963 357888 99999999987 3 347899999999999975544433221110 1
Q ss_pred eeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012628 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (459)
Q Consensus 204 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~ 283 (459)
+.. .+..|++++++++++ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|.......
T Consensus 118 ~~~----~~~~d~~~l~~~i~~---~TklV~lesP~NPtg~~---~di~~I~~la~~~gi~vvvD~t~~~~~~~~----- 182 (364)
T PRK07269 118 FHF----TYANTEEELIAAIEE---DTDIVYIETPTNPLMVE---FDIEKVAKLAHAKGAKVIVDNTFYSPIYQR----- 182 (364)
T ss_pred EEE----EecCCHHHHHHhcCc---CceEEEEECCCCCCCee---eCHHHHHHHHHHcCCEEEEECCCcccccCC-----
Confidence 111 234689999999975 78899999999999998 688899999999999999999975432211
Q ss_pred hHHHHHHhcCCeEEEEEcCCcCcccCCCC-cceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhH
Q 012628 284 SSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALF 362 (459)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 362 (459)
.+ . ..-++++.|++|.++-+|-= -|++ ++.++++.+++..... ......+...+..+..-|+.
T Consensus 183 -pl----~-~gaDivv~S~tK~l~g~~d~~gG~v--~~~~~~l~~~~~~~~~----~~G~~~s~~~a~l~~~~L~t---- 246 (364)
T PRK07269 183 -PI----E-LGADIVLHSATKYLSGHNDVLAGVV--VTNDLELYEKLFYNLN----TTGAVLSPFDSYLLMRGLKT---- 246 (364)
T ss_pred -ch----h-hCCcEEEecCceeccCCCcccceEE--EeCcHHHHHHHHHHHH----HhCCCCCHHHHHHHHcCCCc----
Confidence 11 1 13458999999999755532 3554 3556675555542211 11123344444444433332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCCHHHHHHHHhc-------------ccEEEc
Q 012628 363 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNK-------------WHVYMT 429 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~-------------~gI~v~ 429 (459)
+....++.+++...+.+.|+ ..+. -...++++.||++.|.-.+.+.+.++++. ..+.+.
T Consensus 247 ------L~~r~~~~~~na~~~a~~L~-~~p~-v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~ 318 (364)
T PRK07269 247 ------LSLRMERSTANAQEVVAFLK-KSPA-VKEVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITY 318 (364)
T ss_pred ------HHHHHHHHHHHHHHHHHHHH-hCCC-ccEEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeC
Confidence 45666677777888888887 6531 01223467788887652233333333322 122333
Q ss_pred CC---------------C------cEEEccCChhhHHHHHHHHHHHHh
Q 012628 430 KD---------------G------RISLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 430 ~g---------------g------Ris~~~~~~e~i~~~~~~l~~~~~ 456 (459)
|. | |+|++- |+.+.+++-|.++++
T Consensus 319 p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 319 PTTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred CcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 32 1 999975 677888888887764
No 224
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.84 E-value=2.1e-18 Score=171.76 Aligned_cols=339 Identities=13% Similarity=-0.002 Sum_probs=198.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...+|+..|..-..-|.. +|.|.+++.+.++... + +.+.. ..+....+++.+...... .+.+.+ +++|+
T Consensus 39 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~-~-~~~~~-~~~~~~~la~~L~~~~~~---~~~v~f--~~sGs 108 (408)
T PRK04612 39 GREYLDLAAGIAVCGLGHN--DPDLVAALTEQAGKLW-H-TSNVF-YSAPPLKLAEELVTASRF---AEKVFL--CNSGT 108 (408)
T ss_pred CCEEEEcCccHhhccCCCC--CHHHHHHHHHHHHhcc-c-ccccc-CCHHHHHHHHHHHhhCCC---CCEEEE--cCchH
Confidence 3578898877542333443 7889999988876421 1 11111 112233444444332111 267888 99999
Q ss_pred hHHHHHHHHHHHhC--C-----CCEEEEcCCCCcchHHHhh-hCCCCee---eeeeecC--CCCCCCHHHHHHHHHcCCC
Q 012628 162 GSLRLAAALIERYF--P-----GAKVLISSPTWGNHKNIFN-DARVPWS---EYRYYDP--KTVGLDFEGMIADIKAAPG 228 (459)
Q Consensus 162 ~a~~l~~~~~~~~~--~-----gd~Vlv~~p~y~~~~~~~~-~~G~~v~---~v~~~~~--~~~~~d~e~l~~~i~~~~~ 228 (459)
+|++.+.++...+. . ..+|+....+|.+...... ..|.... .-|..+. .-.-.|++.+++.+..
T Consensus 109 eA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--- 185 (408)
T PRK04612 109 EANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG--- 185 (408)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC---
Confidence 99999988877652 1 2469999998876533222 2221100 0011000 0011378888888853
Q ss_pred CcEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc
Q 012628 229 GSFILLHGCAHNPTGIDPT--PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~~s--~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (459)
.....++..|.+++|.+++ ++.+++|.++|++||+++|+||+|.+++..+ ..+.. ...+.+..+.+|||.+
T Consensus 186 ~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G---~~~a~----~~~~~~pdi~t~~K~l 258 (408)
T PRK04612 186 GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG---TLFAH----WQEQVTPDIVTLAKAL 258 (408)
T ss_pred CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---chhhh----hhcCCCCCEEEEcchh
Confidence 3344455667888886665 5689999999999999999999999887542 11111 1223445667999999
Q ss_pred ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 386 (459)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (459)
+ +|+|+||+++ +++..+.+ .......+.+.+.+++.++...|+.- ++ +...++.+++.+++.+.
T Consensus 259 ~-~G~piga~~~---~~~~~~~~----~~~~~~~t~~~~p~~~aaa~a~L~~~------~~--~~l~~~~~~~g~~l~~~ 322 (408)
T PRK04612 259 G-GGFPIGAMLA---GPKVAETM----QFGAHGTTFGGNPLAAAVARVALRKL------AS--PQIAANVARQSAALRAG 322 (408)
T ss_pred c-CCCceEEEEE---CHHHHhhh----cCCCcCCCCCCCHHHHHHHHHHHHHH------Hh--ccHHHHHHHHHHHHHHH
Confidence 9 8999999865 66633333 22222223345566666665554311 01 24455666666666666
Q ss_pred HhhccCCCC-CcccccCCcceeee--cC-C---CHHHHHHHHhcccEEEcCCC----cEEEc-cCChhhHHHHHHHHHHH
Q 012628 387 LSAKDKSGK-DWSFILRQIGMFSF--TG-L---NKAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDS 454 (459)
Q Consensus 387 L~~~~g~~~-~~~~~~~~~g~f~~--~~-l---~~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~e~i~~~~~~l~~~ 454 (459)
|+ ++.... .+..+...|.++.. .. . ..++.+.+. ++||.+.+.| |+... ..+++++++++++|.++
T Consensus 323 l~-~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~-~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~ 400 (408)
T PRK04612 323 LE-ALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAA-EHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLA 400 (408)
T ss_pred HH-HHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHH-HCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHH
Confidence 66 542100 01223444433321 11 1 112344444 4699998765 66532 23899999999999999
Q ss_pred Hhhc
Q 012628 455 YHNV 458 (459)
Q Consensus 455 ~~~~ 458 (459)
+.++
T Consensus 401 l~~~ 404 (408)
T PRK04612 401 LADY 404 (408)
T ss_pred HHHH
Confidence 8753
No 225
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=2.8e-18 Score=168.83 Aligned_cols=219 Identities=12% Similarity=0.076 Sum_probs=151.7
Q ss_pred CCCCC--CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh---
Q 012628 120 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF--- 194 (459)
Q Consensus 120 ~~Y~~--~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~--- 194 (459)
+.|+. ..+...|+++||++..+ +++++ ++||++|+..+ +.+.+.+||+|++++|.|.++...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~~--------~~~~~--~~sG~~Ai~~~--l~all~~GD~Vvv~~~~Y~~t~~l~~~~ 120 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEGG--------AGTAL--YPSGAAAISNA--LLSFLKAGDHLLMVDSCYEPTRDLCDKI 120 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHh
Confidence 45655 34557999999998532 35777 89999999998 5556889999999999998776543
Q ss_pred -hhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC
Q 012628 195 -NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (459)
Q Consensus 195 -~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~ 273 (459)
...|+++..++.. |.+.+++++++ +++++++++|+||||.+ .++++|+++|+++|+++++|++|..
T Consensus 121 l~~~Gi~v~~v~~~-------~~e~l~~~l~~---~TklV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 121 LKGFGIETTYYDPM-------IGEGIRELIRP---NTKVLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhcceEEEEECCC-------CHHHHHHhcCc---CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 4577777766431 45778888765 78999999999999988 8999999999999999999999865
Q ss_pred CCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHH
Q 012628 274 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV 352 (459)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (459)
.... . ++ ..+-++++.|.+|.++-+| ...|++ +.+++..+.+..... ......+...+..+
T Consensus 188 p~~~--~----Pl-----~~GaDivv~S~tK~l~Gh~d~~~G~~---~~~~~~~~~l~~~~~----~~G~~~~p~~a~l~ 249 (394)
T PRK09028 188 PINS--R----PF-----EMGVDISIQAATKYIVGHSDVMLGTA---TANEKHWDQLREHSY----LMGQCTSPDDVYLA 249 (394)
T ss_pred cccC--C----cc-----ccCceEEEEeCCeEecCCCCEEEEEE---ECCHHHHHHHHHHHH----hcCCCCCHHHHHHH
Confidence 3311 1 11 2346799999999995444 545543 346664444433221 11223344333333
Q ss_pred HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 353 ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
..-|+. +..+.++..++...+.+.|+ +.+
T Consensus 250 ~rgl~T----------L~lR~~~~~~na~~la~~L~-~~p 278 (394)
T PRK09028 250 MRGLRT----------LGVRLAQHEKNALKVANWLA-TRP 278 (394)
T ss_pred HcccCc----------HHHHHHHHHHHHHHHHHHHh-cCC
Confidence 333332 45566777778888888888 653
No 226
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=1.6e-18 Score=171.87 Aligned_cols=212 Identities=16% Similarity=0.129 Sum_probs=141.7
Q ss_pred ccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHhhhCCCCee
Q 012628 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARVPWS 202 (459)
Q Consensus 127 g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~G~~v~ 202 (459)
-..+|++.+|++... +..++ +++|+.++.++ + ..+.+||+|++++|.|+.. ...++..|++++
T Consensus 55 ~~~~le~~lA~l~g~-------~~~v~---~~sG~~ai~~~--l-~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~ 121 (390)
T PRK08064 55 TREALEDIIAELEGG-------TKGFA---FASGMAAISTA--F-LLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHT 121 (390)
T ss_pred hHHHHHHHHHHHhCC-------CCeEE---ECCHHHHHHHH--H-HHhCCCCEEEEccCccchHHHHHHHHHHHcCCEEE
Confidence 457899999999643 23454 46667788776 3 3578999999999999743 244567899999
Q ss_pred eeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCC
Q 012628 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (459)
Q Consensus 203 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~ 282 (459)
.++.. |++.+++++++ +++++++++|+||||.+ .++++|.++|+++|+++|+|++|.......
T Consensus 122 ~v~~~-------d~~~l~~~l~~---~tklV~l~~p~NptG~~---~dl~~I~~la~~~g~~vvvD~a~~~~~~~~---- 184 (390)
T PRK08064 122 FVDMT-------NLEEVAQNIKP---NTKLFYVETPSNPLLKV---TDIRGVVKLAKAIGCLTFVDNTFLTPLLQK---- 184 (390)
T ss_pred EECCC-------CHHHHHHhcCC---CceEEEEECCCCCCcEe---ccHHHHHHHHHHcCCEEEEECCCCcccccC----
Confidence 88762 68899988875 78899999999999999 577889999999999999999987654211
Q ss_pred hhHHHHHHhcCCeEEEEEcCCcCcc-cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhh
Q 012628 283 ASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPAL 361 (459)
Q Consensus 283 ~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 361 (459)
.+ ..+.++++.|+||.++ .+|...|+++ ..+++..+++.... .......+...+.. .+.+-
T Consensus 185 --~~-----~~g~Divv~S~tK~~~G~~~~laG~~v--~~~~~~~~~l~~~~----~~~g~~~~~~~a~l---~~~gl-- 246 (390)
T PRK08064 185 --PL-----DLGADVVLHSATKFLAGHSDVLAGLAV--VKDEELAQKLYFLQ----NSFGAVLGVQDCWL---VLRGL-- 246 (390)
T ss_pred --ch-----hhCCcEEEeecceeccCCccceeEEEE--eCCHHHHHHHHHHH----HhcCCCCCHHHHHH---HHccc--
Confidence 11 1235688999999985 3445567763 45566444443322 22111222222222 22211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 362 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
+.+....++..++...+.+.|+ +.+
T Consensus 247 -----~tl~~R~~~~~~~a~~la~~L~-~~~ 271 (390)
T PRK08064 247 -----KTLHVRLEHSSETANKIALYLQ-EHP 271 (390)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 1234555666667777777777 553
No 227
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.84 E-value=1.6e-18 Score=173.49 Aligned_cols=159 Identities=18% Similarity=0.131 Sum_probs=125.1
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~G~ 199 (459)
+..-..+|++.+|++... +..++ +++|+.++..+ +...+.+||+|+++.+.|+.. ...++..|+
T Consensus 55 ~~p~~~~le~~lA~l~g~--------~~~v~--~~sG~~Ai~~a--l~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 122 (418)
T TIGR01326 55 MNPTTDVLEQRIAALEGG--------VAALA--VASGQAAITYA--ILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGI 122 (418)
T ss_pred CChhHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCc
Confidence 445568999999999643 34556 79999999888 445578999999999988643 344667899
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++. + |++++++++++ +++++++++|+||||.+. ++++|+++|+++|+++|+|++|......
T Consensus 123 ~v~~v~~--~-----d~~~l~~~l~~---~t~~V~le~p~NPtg~v~---dl~~I~~la~~~~i~livD~t~~~~~~~-- 187 (418)
T TIGR01326 123 EVRFVDP--D-----DPEEFEKAIDE---NTKAVFAETIGNPAINVP---DIEAIAEVAHAHGVPLIVDNTFATPYLC-- 187 (418)
T ss_pred EEEEECC--C-----CHHHHHHhcCc---CCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCchhhcC--
Confidence 9988874 1 78999998875 678888899999999994 5788999999999999999997633211
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
. . + ..+.++++.|+||.++.+|+|+||+++
T Consensus 188 --~--~---l--~~g~Divv~S~sK~l~g~G~~lGg~v~ 217 (418)
T TIGR01326 188 --R--P---I--DHGADIVVHSATKYIGGHGTAIGGVIV 217 (418)
T ss_pred --C--c---h--hcCCeEEEECccccccCCccceEEEEE
Confidence 0 1 1 124689999999999999999999965
No 228
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=2.8e-18 Score=171.71 Aligned_cols=337 Identities=11% Similarity=0.057 Sum_probs=195.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC--CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-..-++. +|.|.+++.+.++.... ..+.+.+...++-+.+++...... .+.+.+ +++
T Consensus 39 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~-----~~~v~f--~~S 109 (425)
T PRK07495 39 GRRYIDFAAGIAVVNTGHR--HPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDF-----AKKTIF--VTT 109 (425)
T ss_pred CCEEEEccccHHhhccCCC--CHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCC-----CCEEEE--CCc
Confidence 4578898887542233443 78899999888764210 112233333445555555432110 257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-CC-------------CCeeeeeeecCCCCCCC----HHHHHH
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR-------------VPWSEYRYYDPKTVGLD----FEGMIA 221 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~G-------------~~v~~v~~~~~~~~~~d----~e~l~~ 221 (459)
|++|++.+.++........+|+....+|.+....... .| ..++.+|...+ ..+.+ ++.+++
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~l~~ 188 (425)
T PRK07495 110 GAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQSLAALDK 188 (425)
T ss_pred hHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHHHHHHHH
Confidence 9999999988877665567899999888765322111 11 12333444211 11233 444566
Q ss_pred HHHc--CCCCcEE-EEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEE
Q 012628 222 DIKA--APGGSFI-LLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (459)
Q Consensus 222 ~i~~--~~~~~~~-ii~~~p~NPTG-~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 297 (459)
.+.. .+++..+ ++-+..+| +| ..++++.+++|.++|++||+++|+||+|.+++..+ ..+... ..+...
T Consensus 189 ~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G---~~~a~~----~~gv~p 260 (425)
T PRK07495 189 LFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTG---KLFAME----HHEVAA 260 (425)
T ss_pred HHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCC---Cceeec----ccCCCC
Confidence 6642 1223444 44444566 88 45799999999999999999999999999886542 111111 112223
Q ss_pred EEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHH---HhCChhhHHHHHHHHHHHHH
Q 012628 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN---VVGNPALFDEWKAEMEMMAG 374 (459)
Q Consensus 298 ~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~L~~~~~~~~~~~~~~~~~~ 374 (459)
-+.+|||.++ +|+|+|++++ +++..+. +.......+.+.+.+++.++.. ++++++ ..+
T Consensus 261 Di~tlsK~l~-~G~pigav~~---~~~i~~~----~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~-----------l~~ 321 (425)
T PRK07495 261 DLTTMAKGLA-GGFPLAAVTG---RAEIMDA----PGPGGLGGTYGGNPLGIAAAHAVLDVIEEED-----------LCE 321 (425)
T ss_pred CEEeehhhhc-CCccceEEEE---cHHHHhc----cCCCCcCCCCCCCHHHHHHHHHHHHHHHhch-----------HHH
Confidence 3568999999 8999999876 7774333 3222222233455555554433 333322 233
Q ss_pred HHHHHHHHHHHHHhhccC--CCCCcccccCCcceeeecCCC--------H----HHHHHHHhcccEEEcCCC------cE
Q 012628 375 RIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGLN--------K----AQSDNMTNKWHVYMTKDG------RI 434 (459)
Q Consensus 375 ~~~~~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~~~~l~--------~----~~~~~ll~~~gI~v~~gg------Ri 434 (459)
+.+++.+++.+.|+ ++- .|. +..+... |+++|+.+. . .+.+.+++ +||.+.+.| ||
T Consensus 322 ~~~~~g~~l~~~L~-~l~~~~~~-i~~vrG~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~g~~~~~~r~ 397 (425)
T PRK07495 322 RANQLGNRLKQRLA-SLRETVPE-IADIRGP-GFMNAVEFNDADSGLPSAEFANRVRLKALE-KGLILLTCGVHGNVIRF 397 (425)
T ss_pred HHHHHHHHHHHHHH-HHHhhCCC-eeeeecC-ceEEEEEEecCCCCCccHHHHHHHHHHHHH-CCeEEeecCCCCCEEEE
Confidence 34444444444443 320 110 1112222 677776441 1 22344455 699986532 66
Q ss_pred EEc-cCChhhHHHHHHHHHHHHhhcC
Q 012628 435 SLA-GLSLAKCEYLADAIIDSYHNVS 459 (459)
Q Consensus 435 s~~-~~~~e~i~~~~~~l~~~~~~~~ 459 (459)
.-. .++++++++++++|.+++++++
T Consensus 398 ~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 398 LAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 532 2389999999999999998764
No 229
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=2e-18 Score=172.66 Aligned_cols=158 Identities=19% Similarity=0.150 Sum_probs=123.9
Q ss_pred CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcc----hHHHhhhCCCC
Q 012628 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN----HKNIFNDARVP 200 (459)
Q Consensus 125 ~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~----~~~~~~~~G~~ 200 (459)
..-...|.+.+|++... +..++ +++|++++..+ +.+.+.+||+|+++.+.|+. +...++..|++
T Consensus 63 ~p~~~~Le~~lA~leg~--------~~al~--~~sG~~Ai~~a--l~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~ 130 (431)
T PRK08248 63 NPTTDVFEKRIAALEGG--------IGALA--VSSGQAAITYS--ILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGIT 130 (431)
T ss_pred CchHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence 34467888999998643 34556 79999999988 55567899999999998864 33456678999
Q ss_pred eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012628 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (459)
Q Consensus 201 v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~ 280 (459)
++.++. .|++.+++++++ +++++++++|+||||.+.+ +++|+++|+++|+++|+|++|... ..
T Consensus 131 v~~vd~-------~d~e~l~~ai~~---~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~-~~--- 193 (431)
T PRK08248 131 VKFVDP-------SDPENFEAAITD---KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP-YL--- 193 (431)
T ss_pred EEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc-cc---
Confidence 988876 278999999875 6788888999999999954 678999999999999999997521 11
Q ss_pred CChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
...+ ..+.++++.|++|.+|.+|.++|++++
T Consensus 194 --~~pl-----~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 194 --LRPI-----EHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred --CChh-----HcCCCEEEEcCccccCCCCCceEEEEE
Confidence 0011 234678889999999999999999865
No 230
>PRK05939 hypothetical protein; Provisional
Probab=99.83 E-value=5.9e-18 Score=167.72 Aligned_cols=154 Identities=16% Similarity=0.146 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH---HhhhCCCCeeeee
Q 012628 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFNDARVPWSEYR 205 (459)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~---~~~~~G~~v~~v~ 205 (459)
.+|++.++++..+. ..++ +++|+.|+..+ +...+.+||+|+++++.|+.+.. .++..|++++.++
T Consensus 50 ~~lE~~la~leg~~-------~~v~---~ssG~~Ai~~~--l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~ 117 (397)
T PRK05939 50 AALEAKITKMEGGV-------GTVC---FATGMAAIAAV--FLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVD 117 (397)
T ss_pred HHHHHHHHHHhCCC-------eEEE---eCCHHHHHHHH--HHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEEC
Confidence 48999999986442 3344 46678999887 44557899999999999976544 4567899988887
Q ss_pred eecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhH
Q 012628 206 YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS 285 (459)
Q Consensus 206 ~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~ 285 (459)
. .|++++++++++ +++++++++|+||||.+ .++++|+++|+++|+++|+|++|..... .+ .
T Consensus 118 ~-------~d~e~l~~~l~~---~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~~--~~--~-- 178 (397)
T PRK05939 118 A-------TDVQNVAAAIRP---NTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPWL--FR--P-- 178 (397)
T ss_pred C-------CCHHHHHHhCCC---CCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCcccccc--cC--c--
Confidence 5 278999999875 78899999999999999 8899999999999999999999754321 10 0
Q ss_pred HHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 286 VRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 286 ~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
...+.++++.|+||.++.+|.++|++++
T Consensus 179 -----~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 179 -----KDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred -----cccCCEEEEecCeecccCCCCeEEEEEe
Confidence 1124679999999999989999999854
No 231
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=4.6e-18 Score=161.51 Aligned_cols=327 Identities=15% Similarity=0.128 Sum_probs=212.1
Q ss_pred CCCCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC--CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 80 DTDEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 80 ~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
+.+..-|||..|.-.+..++. +|.+.+++++.+++- ..+.| .+.-..+|-+.+++... ..+.|++ +
T Consensus 39 ~~G~~YlDf~~Giav~~lGH~--hP~iv~al~~Q~~kl~h~sn~~-~~~~~~~la~~L~~~s~-------~~d~vff--~ 106 (404)
T COG4992 39 QQGREYLDFAAGIAVNNLGHC--HPALVEALKEQAEKLWHVSNLF-YNEPQAELAEKLVELSP-------FADRVFF--C 106 (404)
T ss_pred CCCCEeeeeccceeeeccCCC--CHHHHHHHHHHHHHhhhccccc-CChHHHHHHHHHHhhCc-------cccEEEE--c
Confidence 345688999999876666664 799999998876541 12334 22233344444444421 1588999 9
Q ss_pred ccchhHHHHHHHHHHHhCC---CCEEEEcCCCCcchHHHhhhCCC-------------CeeeeeeecCCCCCCCHHHHHH
Q 012628 158 LSGTGSLRLAAALIERYFP---GAKVLISSPTWGNHKNIFNDARV-------------PWSEYRYYDPKTVGLDFEGMIA 221 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~~---gd~Vlv~~p~y~~~~~~~~~~G~-------------~v~~v~~~~~~~~~~d~e~l~~ 221 (459)
++|+||++.+.++.+.+.. ..+|+...-+|.+-.-..-+.+. .++.+|+ -|++++++
T Consensus 107 NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ 179 (404)
T COG4992 107 NSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEA 179 (404)
T ss_pred CCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHH
Confidence 9999999999999887764 34788888777632211111111 2334444 28999999
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEE
Q 012628 222 DIKAAPGGSFILLHGCAHNPTGIDPTP-EQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (459)
Q Consensus 222 ~i~~~~~~~~~ii~~~p~NPTG~~~s~-~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (459)
++++ .+..+++-..+-..|+++.+ +-++++.++|++||+++|.||+..+++-. .+.+....+ .-.++++
T Consensus 180 ai~~---~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRT---Gk~fA~e~~-gV~PDI~--- 249 (404)
T COG4992 180 AIDE---DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRT---GKLFAYEHY-GVEPDIL--- 249 (404)
T ss_pred Hhcc---CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCcc---chHHHHHHh-CCCCCEE---
Confidence 9997 88889888889999987654 55999999999999999999998888743 344544333 3345555
Q ss_pred cCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHH---hCChhhHHHHHHHHHHHHHHHH
Q 012628 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEMEMMAGRIK 377 (459)
Q Consensus 301 S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---L~~~~~~~~~~~~~~~~~~~~~ 377 (459)
++.|.+| .|+.||.+.+ .+. +.+.+.......+.+-+.++..++... +.++ ...++.+
T Consensus 250 tlaK~Lg-GG~PigA~la---~~~----~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e-----------~ll~~v~ 310 (404)
T COG4992 250 TLAKALG-GGFPIGAMLA---TEE----IASAFTPGDHGSTFGGNPLACAVALAVLEVLLEE-----------GLLENVR 310 (404)
T ss_pred Eeecccc-CCccceeeEE---chh----hhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcch-----------hHHHHHH
Confidence 6899999 8999999965 444 333344333334444455555554333 3333 3345555
Q ss_pred HHHHHHHHHHhhccCCCCCcccccCCcceeeecCC----C---HHHHHHHHhcccEEEcCCC----cEEEcc-CChhhHH
Q 012628 378 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----N---KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCE 445 (459)
Q Consensus 378 ~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l----~---~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~e~i~ 445 (459)
++-+++.+.|+ ++.-+ +.++..--|.-+++|+ + .++++.+.+ +||.+.+.| |+.-.- +++|+++
T Consensus 311 ~~g~~~~~~L~-~l~~~--~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~-~gvL~~~a~~~ViR~~PpL~i~~eei~ 386 (404)
T COG4992 311 EKGEYLLQRLR-ELKRR--YPLVKEVRGRGLMIGIELKEPYRARDIVRALRE-EGVLVLPAGPNVIRFLPPLVITEEEID 386 (404)
T ss_pred HHHHHHHHHHH-HHhhc--CCceeeeecceeEEEEEecCcccHHHHHHHHHH-CCeEEecCCCCeEEecCCccCCHHHHH
Confidence 66666666666 54211 1122222233333332 2 345666666 599998877 776443 3899999
Q ss_pred HHHHHHHHHHhhc
Q 012628 446 YLADAIIDSYHNV 458 (459)
Q Consensus 446 ~~~~~l~~~~~~~ 458 (459)
+++++|.++++.+
T Consensus 387 ~~~~~l~~~l~~~ 399 (404)
T COG4992 387 EALDALERALAAA 399 (404)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999864
No 232
>PRK05968 hypothetical protein; Provisional
Probab=99.83 E-value=3.5e-18 Score=169.48 Aligned_cols=212 Identities=14% Similarity=0.108 Sum_probs=142.5
Q ss_pred cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHhhhCCCCe
Q 012628 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARVPW 201 (459)
Q Consensus 126 ~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~G~~v 201 (459)
.-..+|++++|++.... ..++ +++|+.++.++ +...+.+||+|+++.+.|... ...+...|+++
T Consensus 63 p~~~~le~~lA~l~g~~-------~av~---~~sG~~Ai~~a--l~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v 130 (389)
T PRK05968 63 PTVRAFEEMLAKLEGAE-------DARG---FASGMAAISST--VLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEV 130 (389)
T ss_pred hhHHHHHHHHHHHhCCC-------cEEE---ECCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceE
Confidence 34679999999996542 3344 57778898887 445578999999999999753 34566789998
Q ss_pred eeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012628 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (459)
Q Consensus 202 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~ 281 (459)
+.++. .|++.+++++ + +++++++++|.||++.+ .++++|+++|++||+++|+|++|....+..
T Consensus 131 ~~vd~-------~d~~~l~~~i-~---~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~--- 193 (389)
T PRK05968 131 DYVDG-------RDEEAVAKAL-P---GAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR--- 193 (389)
T ss_pred EEeCC-------CCHHHHHHhc-c---cCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC---
Confidence 88864 2788998887 3 56677776666665555 999999999999999999999986654321
Q ss_pred ChhHHHHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChh
Q 012628 282 DASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 360 (459)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 360 (459)
++ . ...++++.|+||.++.+| .+.|+++. +++.++++....... .....+...+.++...|+.
T Consensus 194 ---p~----~-~g~Divv~S~tK~l~g~~~~~gG~i~~---~~~~~~~l~~~~~~~---~g~~~~~~~A~~~l~~L~t-- 257 (389)
T PRK05968 194 ---PI----T-LGVDLVIHSASKYLGGHSDTVAGVVAG---SKEHIARINAEAYPY---LGAKLSPFEAWLLLRGLRT-- 257 (389)
T ss_pred ---ch----h-cCCcEEEeeccccccCCCCeEEEEEEE---CHHHHHHHHHHHHHh---CCCCCChHHHHHHHcccCc--
Confidence 11 1 123578889999998755 46787754 777666555432221 1123333443444333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 361 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
+....++..+..+.+.+.|+ ++
T Consensus 258 --------l~~r~~~~~~~a~~la~~L~-~~ 279 (389)
T PRK05968 258 --------LPLRMKAHEASALEIARRLK-AH 279 (389)
T ss_pred --------HHHHHHHHHHHHHHHHHHHH-hC
Confidence 34444555556777777787 65
No 233
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.83 E-value=1.4e-17 Score=165.46 Aligned_cols=197 Identities=17% Similarity=0.074 Sum_probs=138.8
Q ss_pred cCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHH-hCCCCE
Q 012628 101 YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAK 179 (459)
Q Consensus 101 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~-~~~gd~ 179 (459)
.+.++-.+++.+.+..+. |.......+|++++++++... +.++ ++||++|+.++ +.+. +.+||+
T Consensus 7 ~~~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g~~--------~~v~--~~sgt~al~~~--l~al~~~~Gd~ 71 (380)
T TIGR03588 7 SIDQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVGAK--------YAVA--FNSATSALHIA--CLALGVGPGDR 71 (380)
T ss_pred CCCHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHCCC--------eEEE--EcCHHHHHHHH--HHHcCCCCCCE
Confidence 345666777877775532 444556789999999997542 3444 57899999998 3333 569999
Q ss_pred EEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 012628 180 VLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADVI 258 (459)
Q Consensus 180 Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~ 258 (459)
|+++.|+|..+...++..|++++.++++ ++++.+|++.+++.+++.+ ++++++++ .|++|.. .++++|.++|
T Consensus 72 Viv~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~---~~~~~i~~l~ 144 (380)
T TIGR03588 72 VWTTPITFVATANCALYCGAKVDFVDID-PDTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKS---VDMQAIAALA 144 (380)
T ss_pred EEeCCcchHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCcc---CCHHHHHHHH
Confidence 9999999999999999999999999985 3467899999999998310 25677763 5689987 5688999999
Q ss_pred HhcCCeeEEeccCCCCC-CCCCCCChhHHHHHHhcCCeEEEEEcCC--cCcccCCCCcceEEEEeCChhHHHHHHH
Q 012628 259 QEKNHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKS 331 (459)
Q Consensus 259 ~~~~~~ii~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RiG~~~~v~~~~~~~~~~~~ 331 (459)
++||++||+|+++.... +++ .... . .. ..++.+.||+ |.++. | .-|++ ++.+++..+++..
T Consensus 145 ~~~~~~lI~D~a~a~g~~~~~---~~~g--~-~~--~~d~~~~S~~~~K~~~~-~-~GG~v--~~~~~~~~~~~~~ 208 (380)
T TIGR03588 145 KKHGLKIIEDASHALGAEYGG---KPVG--N-CR--YADATVFSFHPVKIITT-A-EGGAV--TTNDEELAERMRL 208 (380)
T ss_pred HHcCCEEEEECCCcccCccCC---EeCC--C-cc--ccceEEEecCCCCcccc-c-CceEE--EECCHHHHHHHHH
Confidence 99999999999965432 221 1111 0 00 1256667776 88874 3 24555 4667776555543
No 234
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.82 E-value=3.4e-19 Score=170.57 Aligned_cols=172 Identities=15% Similarity=0.020 Sum_probs=130.2
Q ss_pred CCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCe
Q 012628 122 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW 201 (459)
Q Consensus 122 Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v 201 (459)
+.|..-+.++++.+|+++.. ++-+++ |+|+|+++..+ +.+.+.+||+|+++.|+|..+...+...|+++
T Consensus 55 ~~~~g~i~~~~~~~A~~~ga-------~~~~~~--~~Gst~a~~~~--l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~ 123 (294)
T cd00615 55 LDPTGPIKEAQELAARAFGA-------KHTFFL--VNGTSSSNKAV--ILAVCGPGDKILIDRNCHKSVINGLVLSGAVP 123 (294)
T ss_pred CCCChHHHHHHHHHHHHhCC-------CCEEEE--cCcHHHHHHHH--HHHcCCCCCEEEEeCCchHHHHHHHHHCCCEE
Confidence 33555578899999999753 244555 88999999887 55557899999999999999888899999999
Q ss_pred eeeeeecCCC----CCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCC-CC
Q 012628 202 SEYRYYDPKT----VGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGF-AS 276 (459)
Q Consensus 202 ~~v~~~~~~~----~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~-~~ 276 (459)
++++...+.. +.+|++.+++++++. ++++++++++| ||||.++ ++++|+++|+++|+++|+||+|... .+
T Consensus 124 ~~v~~~~~~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p-~~~G~~~---dl~~I~~~~~~~g~~livDeA~~~~~~~ 198 (294)
T cd00615 124 VYLKPERNPYYGIAGGIPPETFKKALIEH-PDAKAAVITNP-TYYGICY---NLRKIVEEAHHRGLPVLVDEAHGAHFRF 198 (294)
T ss_pred EEecCccCcccCcCCCCCHHHHHHHHHhC-CCceEEEEECC-CCCCEec---CHHHHHHHHHhcCCeEEEECcchhhhcc
Confidence 9987743332 378999999999753 35677777888 7999995 5788999999999999999998753 22
Q ss_pred CCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEE
Q 012628 277 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMN 317 (459)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~ 317 (459)
.+. . .. .....+.++++.|++|.+ +|++.|+++
T Consensus 199 ~~~---~-~~--~~~~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 199 HPI---L-PS--SAAMAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred Ccc---c-Cc--chhhcCCcEEEEchhccc--chHhHHHHH
Confidence 210 0 10 112235789999999985 678776663
No 235
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.82 E-value=6.2e-18 Score=167.47 Aligned_cols=193 Identities=18% Similarity=0.132 Sum_probs=134.1
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEE
Q 012628 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 181 (459)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vl 181 (459)
+.+.-.+++.+.+..+. .|+ ..++++++.+++....+ .+++++ ++||++++.++...+ .+.+||+|+
T Consensus 9 ~~~~~~~~~~~~l~~~~--~~g----~~~~~~~~e~~la~~~g----~~~~v~--~~sgt~al~~~l~~~-~~~~Gd~Vi 75 (375)
T PRK11706 9 VVGTELDYIQQAMSSGK--LCG----DGGFTRRCQQWLEQRFG----SAKVLL--TPSCTAALEMAALLL-DIQPGDEVI 75 (375)
T ss_pred CCHHHHHHHHHHHHcCC--ccC----CCHHHHHHHHHHHHHhC----CCeEEE--ECCHHHHHHHHHHHh-CCCCCCEEE
Confidence 35555677777775542 232 22344444444333333 367888 999999998873221 256999999
Q ss_pred EcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012628 182 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (459)
Q Consensus 182 v~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~ 261 (459)
++.|+|..+...+...|++++.++++ ++++.+|++++++++++ +++++++ .|+||.. .++++|.++|++|
T Consensus 76 v~~~t~~~~~~~~~~~G~~~v~~d~d-~~~~~~d~~~le~~i~~---~tk~i~~---~~~~G~~---~~~~~i~~la~~~ 145 (375)
T PRK11706 76 MPSYTFVSTANAFVLRGAKIVFVDIR-PDTMNIDETLIEAAITP---KTRAIVP---VHYAGVA---CEMDTIMALAKKH 145 (375)
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhcCC---CCeEEEE---eCCCCCc---cCHHHHHHHHHHc
Confidence 99999999999999999999999985 44678999999999875 6777774 3679988 6678899999999
Q ss_pred CCeeEEeccCCCCC-CCCCCCChhHHHHHHhcCCeEEEEEcCC--cCcccCCCCcceEEEEeCChhHHHHHHH
Q 012628 262 NHIPFFDVAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKS 331 (459)
Q Consensus 262 ~~~ii~Deay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RiG~~~~v~~~~~~~~~~~~ 331 (459)
|++||+|++|..+. +++ . .+ ... ..+.+.||+ |.++ +|.+.+++ +.++++.+++..
T Consensus 146 ~i~vIeD~a~a~g~~~~~---~--~~----g~~-~~~~~~Sf~~~K~l~-~g~gG~~~---~~~~~~~~~~~~ 204 (375)
T PRK11706 146 NLFVVEDAAQGVMSTYKG---R--AL----GTI-GHIGCFSFHETKNYT-AGEGGALL---INDPALIERAEI 204 (375)
T ss_pred CCEEEEECccccccccCC---e--ee----ecC-cCEEEEeCCCCcccc-ccCCeEEE---ECCHHHHHHHHH
Confidence 99999999976554 221 0 11 111 134445655 9998 58765554 457776655544
No 236
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.82 E-value=7.9e-18 Score=165.70 Aligned_cols=293 Identities=17% Similarity=0.075 Sum_probs=183.4
Q ss_pred HHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHH-hCCCCEEEEcCCC
Q 012628 108 KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER-YFPGAKVLISSPT 186 (459)
Q Consensus 108 ~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~-~~~gd~Vlv~~p~ 186 (459)
+++.+.+..+. |.......++++.+++++.. +++++ +++||++++++. ... +.+||+|+++.++
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~~--------~~~~~--~~sgt~al~~~l--~~l~~~~gd~vl~~~~~ 67 (352)
T cd00616 3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLGV--------KYAVA--VSSGTAALHLAL--RALGIGPGDEVIVPSFT 67 (352)
T ss_pred HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHHHH--HHcCCCCCCEEEeCCcc
Confidence 44555555432 33445678999999999742 35667 789999999983 333 4699999999999
Q ss_pred CcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 187 WGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 187 y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
|..+...+...|++++.++++ ++++.+|++.+++.+++ +++++++ .||+|.. .++++|.++|+++|+++|
T Consensus 68 ~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~~---~~~~G~~---~~~~~i~~l~~~~~i~li 137 (352)
T cd00616 68 FVATANAILLLGATPVFVDID-PDTYNIDPELIEAAITP---RTKAIIP---VHLYGNP---ADMDAIMAIAKRHGLPVI 137 (352)
T ss_pred hHHHHHHHHHcCCeEEEEecC-CCcCCcCHHHHHHhcCc---CCeEEEE---ECCCCCc---CCHHHHHHHHHHcCCeEE
Confidence 999999999999999999984 34688999999998864 6777775 4689988 567889999999999999
Q ss_pred EeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCC--cCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccc-----
Q 012628 267 FDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS--KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP----- 339 (459)
Q Consensus 267 ~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~----- 339 (459)
+|+++....... .. . .... ..+.+.||+ |.++ +.+.|++ ++.+++..+++..........
T Consensus 138 ~D~a~~~g~~~~---~~-~----~~~~-~d~~~~S~~~~K~~~--~~~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (352)
T cd00616 138 EDAAQALGATYK---GR-K----VGTF-GDAGAFSFHPTKNLT--TGEGGAV--VTNDEELAERARLLRNHGRDRDRFKY 204 (352)
T ss_pred EECCCCCCCeEC---CE-E----cccC-cceeEEcCCCCCCCc--ccCceEE--EECCHHHHHHHHHHHHcCCCCCCCcc
Confidence 999965322110 00 0 0111 245667766 8874 3335666 455566555443321111000
Q ss_pred ------cccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCc------cee
Q 012628 340 ------MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI------GMF 407 (459)
Q Consensus 340 ------~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~------g~f 407 (459)
.....+.+...++... .+.+++..++.+++.+++.+.|. +++ ++++..+.. .++
T Consensus 205 ~~~~~~~~~~~~~~~aa~~~~~----------l~~~~~~~~~~~~~~~~~~~~L~-~~~---g~~~~~~~~~~~~~~~~~ 270 (352)
T cd00616 205 EHEILGYNYRLSEIQAAIGLAQ----------LEKLDEIIARRREIAERYKELLA-DLP---GIRLPDVPPGVKHSYHLY 270 (352)
T ss_pred ccceeeeccCcCHHHHHHHHHH----------HHhhHHHHHHHHHHHHHHHHHhc-CCC---CccCCCCCCCCceeeEEE
Confidence 0001222222222111 12346667777888889999998 652 144432211 223
Q ss_pred ee-c----CCCHHHHHHHHhcccEEEc----CC-------------------------C--cEEEcc-CChhhHHHHHHH
Q 012628 408 SF-T----GLNKAQSDNMTNKWHVYMT----KD-------------------------G--RISLAG-LSLAKCEYLADA 450 (459)
Q Consensus 408 ~~-~----~l~~~~~~~ll~~~gI~v~----~g-------------------------g--Ris~~~-~~~e~i~~~~~~ 450 (459)
.+ + +.+.+.+.+.|+++||.+. |. + ||++.. .+++|+++++++
T Consensus 271 ~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~ 350 (352)
T cd00616 271 VIRLDPEAGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEA 350 (352)
T ss_pred EEEECCcCCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHH
Confidence 22 2 2455555444455699553 10 1 666654 388999999988
Q ss_pred HH
Q 012628 451 II 452 (459)
Q Consensus 451 l~ 452 (459)
|+
T Consensus 351 l~ 352 (352)
T cd00616 351 LR 352 (352)
T ss_pred hC
Confidence 73
No 237
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.82 E-value=1.1e-17 Score=165.66 Aligned_cols=319 Identities=13% Similarity=0.028 Sum_probs=193.8
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcC-CC-CCCCCCccc----HHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN-KEYLPIEGL----AAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~-~~Y~~~~g~----~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
...++|+...|+ +... .|.++++..+.+++- .. ..-.-..|. .+|.+.+|+++.. +..++
T Consensus 102 r~~l~FsSndYL---GL~~-~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~--------e~all-- 167 (476)
T PLN02955 102 KKLLLFSGNDYL---GLSS-HPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK--------EDCLV-- 167 (476)
T ss_pred ceEEEeeccCcc---CCCC-CHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC--------CcEEE--
Confidence 468999998885 3332 678888888877531 00 000012333 7899999999743 33444
Q ss_pred cccchhHHHHHHHHHHH------------hCCCCEEEEcCCCCcchHHHhhhC----CCCeeeeeeecCCCCCCCHHHHH
Q 012628 157 GLSGTGSLRLAAALIER------------YFPGAKVLISSPTWGNHKNIFNDA----RVPWSEYRYYDPKTVGLDFEGMI 220 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~------------~~~gd~Vlv~~p~y~~~~~~~~~~----G~~v~~v~~~~~~~~~~d~e~l~ 220 (459)
.++|-.++..+...+.. ..++|.|+...-.+.....-++.. +++++.++. .|++.|+
T Consensus 168 ~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le 240 (476)
T PLN02955 168 CPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLN 240 (476)
T ss_pred ECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHH
Confidence 57777666665322210 124556777666776666666655 466666665 3789999
Q ss_pred HHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh-cCCeEEEE
Q 012628 221 ADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVA 299 (459)
Q Consensus 221 ~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ 299 (459)
+.++..+...++|++....+++|.+. ++++|.++|++||+++|+||+|..+..+.. ...+..... ..+.++++
T Consensus 241 ~~L~~~~~~~~~Vv~EgV~SmdGdia---pL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~---G~G~~e~~g~~~di~ii~ 314 (476)
T PLN02955 241 SLLSSCKMKRKVVVTDSLFSMDGDFA---PMEELSQLRKKYGFLLVIDDAHGTFVCGEN---GGGVAEEFNCEADVDLCV 314 (476)
T ss_pred HHHHhCCCCceEEEEeCCCCCCCCcC---CHHHHHHHHHHcCcEEEEcccccCceecCC---CCcHHHHhCCCCCCcEEE
Confidence 98876544567777788899999994 477888899999999999999886665421 112222221 23578999
Q ss_pred EcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHH--HHHhCChhhHHHHHHHHHHHHHHHH
Q 012628 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDEWKAEMEMMAGRIK 377 (459)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~L~~~~~~~~~~~~~~~~~~~~~ 377 (459)
+||||.+|..| ||+.+ +++.++.+........ ..+..++..+..+. ...+... ...+++++
T Consensus 315 ~TLsKA~G~~G---Gfi~g---s~~~~~~l~~~~~~~i-fStalpp~~aaa~laal~l~~~~----------~~~r~~L~ 377 (476)
T PLN02955 315 GTLSKAAGCHG---GFIAC---SKKWKQLIQSRGRSFI-FSTAIPVPMAAAAYAAVVVARKE----------KWRRKAIW 377 (476)
T ss_pred EeCccchhccC---ceeec---HHHHHHHHHHhCCCCe-ecccccHHHHHHHHHHHHHHhcC----------HHHHHHHH
Confidence 99999998776 88754 7775544443222211 11112222221111 1122111 23445555
Q ss_pred HHHHHHHHHHhhccCCCCCcccccCCccee-eecCCC---HHHHHHHHhcccEEEcCC-------C----cEEEccC-Ch
Q 012628 378 NVRQKLFDSLSAKDKSGKDWSFILRQIGMF-SFTGLN---KAQSDNMTNKWHVYMTKD-------G----RISLAGL-SL 441 (459)
Q Consensus 378 ~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f-~~~~l~---~~~~~~ll~~~gI~v~~g-------g----Ris~~~~-~~ 441 (459)
++.+++.+. .| +.. ...++ ++++.. .++.++|++ +||++.+- | ||+++.. ++
T Consensus 378 ~n~~~fr~~----~G----~~~---~sPI~pI~ig~~~~a~~~~~~L~~-~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~ 445 (476)
T PLN02955 378 ERVKEFKAL----SG----VDI---SSPIISLVVGNQEKALKASRYLLK-SGFHVMAIRPPTVPPNSCRLRVTLSAAHTT 445 (476)
T ss_pred HHHHHHHHh----cC----CCC---CCCEEEEEeCCHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCceEEEeeCCCCCH
Confidence 666555542 23 222 12333 455542 234567766 59987542 2 8888654 89
Q ss_pred hhHHHHHHHHHHHHhh
Q 012628 442 AKCEYLADAIIDSYHN 457 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~ 457 (459)
+||+.++++|.++.+.
T Consensus 446 edId~lv~~L~~~~~~ 461 (476)
T PLN02955 446 EDVKKLITALSSCLDF 461 (476)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999987764
No 238
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=1e-17 Score=165.35 Aligned_cols=214 Identities=15% Similarity=0.145 Sum_probs=142.4
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcc-hH---HHhhhCCC
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN-HK---NIFNDARV 199 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~-~~---~~~~~~G~ 199 (459)
+.....+|++.++++... +..++ +++|+.++..+ +..+.+||+|++++|+|.. |. ..+...|+
T Consensus 48 ~~p~~~~Le~~lA~l~g~-------~~~~~---~~sG~aai~~~---~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~ 114 (377)
T PRK07671 48 GNPTRAALEELIAVLEGG-------HAGFA---FGSGMAAITAV---MMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGI 114 (377)
T ss_pred CChHHHHHHHHHHHHhCC-------CceEE---eCCHHHHHHHH---HHHhCCCCEEEECCCccchHHHHHHHHHhcCCe
Confidence 344567899999998643 23344 46667777665 3457899999999999984 43 23456788
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.++. .|++.+++++++ +++++++++|+||||.+ .++++|.++|+++|+++|+|++|.......
T Consensus 115 ~v~~v~~-------~d~~~l~~ai~~---~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~~- 180 (377)
T PRK07671 115 EHTFVDT-------SNLEEVEEAIRP---NTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQS- 180 (377)
T ss_pred EEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccCC-
Confidence 8888864 378999999975 78899999999999998 678889999999999999999986543221
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCCCC-cceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYAER-IGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
.+ . ...++++.|+||.++.++-- .|++ ++.+++..+++..... ......+...+..+..-+
T Consensus 181 -----p~----~-~g~Divv~S~sK~l~G~~~~~~G~~--v~~~~~l~~~~~~~~~----~~g~~~~~~~a~l~~~~l-- 242 (377)
T PRK07671 181 -----PI----S-LGADIVLHSATKYLGGHSDVVAGLV--VVNSPELAEDLHFVQN----STGGILGPQDSWLLLRGL-- 242 (377)
T ss_pred -----hh----h-hCCeEEEecCcccccCCccceeEEE--EeCcHHHHHHHHHHHH----hhcCCCCHHHHHHHHcCc--
Confidence 11 1 13469999999999855432 3444 4556665444432221 211122333222222211
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
+.+....++..++...+.+.|+ +.
T Consensus 243 --------~tl~~R~~~~~~na~~la~~L~-~~ 266 (377)
T PRK07671 243 --------KTLGIRMEEHETNSRAIAEFLN-NH 266 (377)
T ss_pred --------ChHHHHHHHHHHHHHHHHHHHH-cC
Confidence 1244566666777788888887 54
No 239
>PRK02769 histidine decarboxylase; Provisional
Probab=99.82 E-value=1.3e-17 Score=164.00 Aligned_cols=289 Identities=15% Similarity=0.117 Sum_probs=189.2
Q ss_pred HHHHHHHHHHhcCCCCccccCce--EEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeee
Q 012628 130 AFNKVTAELLFGADNSVLKEQRV--ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY 207 (459)
Q Consensus 130 ~lr~aia~~l~~~~~~~~~~~~i--~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~ 207 (459)
+.++.++++++.. ++++ .+ |+|||+++..+....+.+.++++|++++-.+......++..|.+...+|+.
T Consensus 69 ~~~~~~a~l~g~~------~~~~~G~~--TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 69 DVMNFFAELFKIP------FNESWGYI--TNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred HHHHHHHHHhCCC------CCCCCEEE--ecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 5555666665432 3444 56 999999987764333335688999999999999999999999999999984
Q ss_pred cCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC---CeeEEeccCCCCCCCCCCCChh
Q 012628 208 DPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN---HIPFFDVAYQGFASGSLDNDAS 284 (459)
Q Consensus 208 ~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~---~~ii~Deay~~~~~~~~~~~~~ 284 (459)
.++.+|+++|++++++...++++++.+.++|+||.+ +++++|+++|++|| +++++|.+|..+... ......
T Consensus 141 --~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p-~~~~~~ 214 (380)
T PRK02769 141 --PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILP-FVNNPP 214 (380)
T ss_pred --CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeec-ccCccc
Confidence 367899999999998744458888899999999999 88999999999998 699999997765432 101110
Q ss_pred HHHHHHhcCCeEEEEEcCCcCcc-cCCCCcceEEEEeCChhHHHHHHH---HHHhhccccccCCchH---HHHHHHHHhC
Q 012628 285 SVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKS---QLKRLARPMYSNPPVH---GARIVANVVG 357 (459)
Q Consensus 285 ~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~L~ 357 (459)
.+. ... .-+.+..|.+|.++ +.| +|.+++ .++..+.+.. .+........++.+.. +..++...+.
T Consensus 215 ~~d--~~~-~vDsis~s~HK~~~~P~g--~G~l~~---r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg 286 (380)
T PRK02769 215 PFS--FAD-GIDSIAISGHKFIGSPMP--CGIVLA---KKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLG 286 (380)
T ss_pred cCC--ccC-CCCEEEECCcccCCCCCC--cEEEEE---ehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHC
Confidence 110 111 45677889999987 444 898865 3443332211 0000000011122222 2222222232
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc-ccCCcceeeecCCCHHHHHHHHhcccEEEcCCC-cEE
Q 012628 358 NPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF-ILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG-RIS 435 (459)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~gg-Ris 435 (459)
.+.++++.++..++.+++.+.|+ +.|+ +. ..|.....+|...+.+. .+++.+...++. ||.
T Consensus 287 --------~~G~~~~~~~~~~la~~l~~~L~-~~g~----~~~~~p~~~~v~f~~~~~~~----~~~w~l~~~~~~~hi~ 349 (380)
T PRK02769 287 --------SKGLRQRVQHCLDMAQYAVDRLQ-ANGI----PAWRNPNSITVVFPCPSERI----WKKWHLATSGNQAHII 349 (380)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHH-hCCC----EEEcCCCceEEEEcCCCHHH----HhCeeEcccCCEEEEE
Confidence 23467888899999999999998 7763 43 34554444554334332 244555554444 887
Q ss_pred Ecc-CChhhHHHHHHHHHHHHhh
Q 012628 436 LAG-LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 436 ~~~-~~~e~i~~~~~~l~~~~~~ 457 (459)
+.. .+.|.++.+++-|.+.+..
T Consensus 350 ~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 350 TMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred ECCCCCHHHHHHHHHHHHHHHhc
Confidence 764 3778899999998887653
No 240
>PLN02509 cystathionine beta-lyase
Probab=99.82 E-value=1.4e-17 Score=166.79 Aligned_cols=221 Identities=14% Similarity=0.128 Sum_probs=142.5
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----hh
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FN 195 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~ 195 (459)
+.|... |.+ .++++.+++....+ .++.++ +++|++++.++ +..+.+||+|+++.|.|..+... +.
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~--~~SG~aAi~~i---l~ll~~GD~VI~~~~~y~~t~~ll~~~l~ 193 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFC--FTSGMAALSAV---THLIKNGEEIVAGDDVYGGSDRLLSQVVP 193 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEE--eCcHHHHHHHH---HHHhCCCCEEEEcCCchhhHHHHHHHHHH
Confidence 567544 543 35555554433322 345555 67888887665 34578999999999999987643 45
Q ss_pred hCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012628 196 DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (459)
Q Consensus 196 ~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~ 275 (459)
..|++++.++. .|++++++++++ +++++++++|+||||.+ .++++|+++|++||+++|+|++|....
T Consensus 194 ~~G~~v~~vd~-------~d~e~l~~ai~~---~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~ 260 (464)
T PLN02509 194 RSGVVVKRVNT-------TNLDEVAAAIGP---QTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPV 260 (464)
T ss_pred HCCeEEEEeCC-------CCHHHHHHhCCc---CCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccc
Confidence 67888887754 368999988865 78899999999999998 999999999999999999999965433
Q ss_pred CCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHH
Q 012628 276 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV 355 (459)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (459)
... .+ ....++++.|++|.++-+|--+|.++ ++.++...+++.. +.. ......+...+.++..-
T Consensus 261 ~~~------pl-----~~gaDivv~S~tK~l~G~gdv~gG~v-~~~~~~l~~~~~~-~~~---~~g~~l~p~~A~l~lr~ 324 (464)
T PLN02509 261 LSR------PL-----ELGADIVMHSATKFIAGHSDVMAGVL-AVKGEKLAKEVYF-LQN---SEGSGLAPFDCWLCLRG 324 (464)
T ss_pred cCC------hh-----hcCCcEEEecCcccccCCCccceeEE-EeccHHHHHHHHH-HHH---hcCCCcCHHHHHHHHhh
Confidence 210 11 12346889999999875443234432 2344443333221 111 11112233222222222
Q ss_pred hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 356 VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 356 L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
| +.+....++..++.+.+.+.|+ +.
T Consensus 325 L----------~tL~~R~~r~~~nA~~la~~L~-~~ 349 (464)
T PLN02509 325 I----------KTMALRIEKQQENARKIAMYLS-SH 349 (464)
T ss_pred h----------hhHHHHHHHHHHHHHHHHHHHh-cC
Confidence 1 3356667777778888888887 65
No 241
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=8.7e-18 Score=169.42 Aligned_cols=340 Identities=11% Similarity=0.033 Sum_probs=197.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCC--CCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...||+..|..-...|.. +|.|.+++.+.++..... .........+|.+.++++.... .+.+.+ +++
T Consensus 42 G~~ylD~~~g~~~~~lGh~--~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~------~~~v~f--~~S 111 (433)
T PRK08117 42 GKEYLDFTSGIAVANVGHR--HPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGG------LDCFFF--SNS 111 (433)
T ss_pred CCEEEECCcchhhccCCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCc
Confidence 3578898888542333443 788999998887642101 1113334456666666664221 357888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-hCC-------------CCeeeeeeecCCC--CC--------CC
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR-------------VPWSEYRYYDPKT--VG--------LD 215 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~G-------------~~v~~v~~~~~~~--~~--------~d 215 (459)
|++|++.+.++...+....+|+..+-+|.+...... ..+ ..+..+|...... .+ -|
T Consensus 112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (433)
T PRK08117 112 GAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLEC 191 (433)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHH
Confidence 999999998876655555789888888876432211 111 0122333311000 00 15
Q ss_pred HHHHHHHHHc--CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012628 216 FEGMIADIKA--APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (459)
Q Consensus 216 ~e~l~~~i~~--~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (459)
++.+++.++. .++...++++.....-.|.+ .+++.+++|.++|++||+++|+||+|.+++..+ ..+.... .+.
T Consensus 192 ~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G---~~~~~~~-~gv 267 (433)
T PRK08117 192 LRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTG---EWFAAQT-FGV 267 (433)
T ss_pred HHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccc---cchhHhh-cCC
Confidence 5667766653 22345666666666666765 578889999999999999999999999876532 1111111 111
Q ss_pred CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q 012628 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 372 (459)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 372 (459)
.++ +.+|||.++ +|+++|++++ +++..+. +.......+.+.+.+++.++...|+.- ++ +..
T Consensus 268 ~pD---i~t~sK~lg-~G~pigav~~---~~~i~~~----~~~~~~~~T~~~np~~~aaa~a~L~~l------~~--~~l 328 (433)
T PRK08117 268 VPD---IMTIAKGIA-SGLPLSAVVA---SKELMEQ----WPLGSHGTTFGGNPVACAAALATLEVI------KE--EKL 328 (433)
T ss_pred CCC---Eeehhhhcc-CCCcceeEEE---cHHHHhh----ccCCCCCCCCCcCHHHHHHHHHHHHHH------Hh--ccH
Confidence 223 359999999 8999999866 7774433 322222223344566666665554311 00 123
Q ss_pred HHHHHHHHHHHHHHHhhccC--CCCCcccccCCcceeeecCC-------C----HHHHHHHHhcccEEEcCCC------c
Q 012628 373 AGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGL-------N----KAQSDNMTNKWHVYMTKDG------R 433 (459)
Q Consensus 373 ~~~~~~~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~~~~l-------~----~~~~~~ll~~~gI~v~~gg------R 433 (459)
.++++++.+++.+.|+ ++. .+. +..+ +..|.++.+.+ + ..+.+.+++ +||.+.+.| |
T Consensus 329 ~~~~~~~g~~l~~~L~-~l~~~~~~-~~~v-rg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g~~~~~lR 404 (433)
T PRK08117 329 LDNANEMGAYALERLE-VLKEKHPV-IGDV-RGIGLMIGIEIVDPDGEPDGDAVEKILDKCLE-KGLLFYLCGNAGNVLR 404 (433)
T ss_pred HHHHHHHHHHHHHHHH-HHHhcCCc-eeee-ecCCcEEEEEEecCCCCcchHHHHHHHHHHHH-CCCEEeecCCCCCEEE
Confidence 4444555555555555 431 110 1112 22234433221 1 123445555 699886532 7
Q ss_pred EEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 434 ISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 434 is~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|+.+ ..++++|++++++|.++++++
T Consensus 405 l~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 405 MIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred EeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 7752 339999999999999998764
No 242
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=5.9e-18 Score=167.19 Aligned_cols=163 Identities=16% Similarity=0.148 Sum_probs=120.5
Q ss_pred cHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----hhhCCCCeee
Q 012628 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPWSE 203 (459)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~G~~v~~ 203 (459)
..+|++.+++++.. +++++ +++|+.++.++ +..+.+||+|+++.+.|..+... ++..|++++.
T Consensus 49 ~~~le~~la~l~g~--------~~~l~--~~sG~~al~~~---l~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 115 (378)
T TIGR01329 49 RTALESLLAKLDKA--------DRAFA--FSSGMAALDVI---TRLLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVH 115 (378)
T ss_pred HHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH---HHHhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEE
Confidence 56788888887543 34555 57778888875 23578999999999999876543 4567999998
Q ss_pred eeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012628 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (459)
Q Consensus 204 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~ 283 (459)
++. .|++.+++++++ +++++++++|+||||.+ .++++|+++|+++|+++|+|++|......
T Consensus 116 vd~-------~d~~~le~~i~~---~tklv~le~psnptg~v---~dl~~I~~la~~~g~~vivD~a~~~~~~~------ 176 (378)
T TIGR01329 116 VDT-------TDLDKVKAALGP---KTKLVLLESPTNPLQKI---VDIRKISEMAHAQNALVVVDNTMMSPLLC------ 176 (378)
T ss_pred eCC-------CCHHHHHHhcCc---CceEEEEECCCCCCCee---ecHHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 876 278999999875 78899999999999999 56889999999999999999996432211
Q ss_pred hHHHHHHhcCCeEEEEEcCCcCccc-CCCCcceEEEEeCChhHHHHH
Q 012628 284 SSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARV 329 (459)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RiG~~~~v~~~~~~~~~~ 329 (459)
..+ . ...++++.|++|.++- .+.+.|+++ +++++..+++
T Consensus 177 ~~l----~-~g~Di~v~S~tK~l~G~~~~~~G~v~--~~~~~~~~~~ 216 (378)
T TIGR01329 177 NPL----E-LGADIVYHSATKFLAGHSDVMAGVLA--VKGEEIAKKV 216 (378)
T ss_pred Chh----h-cCCcEEEEecceeccCCccceeEEEE--eCcHHHHHHH
Confidence 011 1 1346899999998753 357788884 4555533444
No 243
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.81 E-value=3.1e-17 Score=152.86 Aligned_cols=313 Identities=17% Similarity=0.085 Sum_probs=199.5
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEE
Q 012628 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv 182 (459)
.|++.++|.+.-.. ....|+..+-..++.+.+++.+.. ..++| +.+||.++.++ +...+.||+.|++
T Consensus 13 ~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~g~--------~a~~F--v~sGT~aN~la--l~~~~~~~~~vi~ 79 (342)
T COG2008 13 TPEMREALAAANAV-GDDVYGEDPTTNALEQRIAELFGK--------EAALF--VPSGTQANQLA--LAAHCQPGESVIC 79 (342)
T ss_pred CHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHHhCC--------ceEEE--ecCccHHHHHH--HHHhcCCCCeEEE
Confidence 79999999887643 346787777777777777777532 56788 89999999998 5555789999999
Q ss_pred cCCCCcchHH--HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc----CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 012628 183 SSPTWGNHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA----APGGSFILLHGCAHNPTGIDPTPEQWEKIAD 256 (459)
Q Consensus 183 ~~p~y~~~~~--~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~----~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~ 256 (459)
..-.+....+ ..+..+ .+..++..+..++.+++|++++.+.. ..+...+++ -|.+|.-|+++|.+++++|.+
T Consensus 80 ~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~-e~~~te~GtVy~l~el~~i~~ 157 (342)
T COG2008 80 HETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVL-ENTATEGGTVYPLDELEAISA 157 (342)
T ss_pred eccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEE-eeccCCCceecCHHHHHHHHH
Confidence 8876643211 122222 23444554456889999999998875 223344444 444557799999999999999
Q ss_pred HHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhh
Q 012628 257 VIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL 336 (459)
Q Consensus 257 l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~ 336 (459)
+|++||+.++.|.+--....-....+...+.. ..+++..++||..+.| +|.+ +..++++++++....+..
T Consensus 158 ~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~-----~~D~v~~~~tK~g~~~---~gAi--v~gn~~~~~~a~~~rK~~ 227 (342)
T COG2008 158 VCKEHGLPLHMDGARLANALVALGVALKTIKS-----YVDSVSFCLTKGGGAP---VGAI--VFGNRDFAKRARRWRKRA 227 (342)
T ss_pred HHHHhCCceeechHHHHHHHHHcCCCHHHHHh-----hCCEEEEecccCCcce---eeeE--EEcCHHHHHHHHHHHHHh
Confidence 99999999999998432211101112222222 2456777899998866 5888 678999776665544432
Q ss_pred ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCcccccCCcceeeecCCCHH
Q 012628 337 ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGLNKA 415 (459)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~g~f~~~~l~~~ 415 (459)
.+ .. .-..+.+.....+|++.-+ .....+-.+....|.+.|. .. | +++..|.-...+|+.+...
T Consensus 228 Gg-l~-~k~r~laA~~~~~l~~~~~--------~~~~~Han~mA~~La~~~~-~~~G----~~~~~~~~tN~vf~~l~~~ 292 (342)
T COG2008 228 GG-LM-RKARFLAAQGLYALEDDVW--------RLAADHANAMAARLAEGLE-AKPG----VKLAFPVETNMVFVRLPES 292 (342)
T ss_pred cc-cH-hhhhHHHHHHHHHHhccHH--------HHHHHHHHHHHHHHHHhhh-hcCC----ceeccCCcccEEEEECChH
Confidence 22 12 2223333333445554322 1222333345777788887 44 5 4655544455667766543
Q ss_pred HHH-----HHHhcccEEEcCCC---cEEEccC-ChhhHHHHHHHHHHHH
Q 012628 416 QSD-----NMTNKWHVYMTKDG---RISLAGL-SLAKCEYLADAIIDSY 455 (459)
Q Consensus 416 ~~~-----~ll~~~gI~v~~gg---Ris~~~~-~~e~i~~~~~~l~~~~ 455 (459)
..+ ..+...|+.+.+++ |+..+.- ++++++.++..+++++
T Consensus 293 ~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 293 AIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 333 23334577777765 7743322 8899999999998765
No 244
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.81 E-value=2.1e-17 Score=163.73 Aligned_cols=230 Identities=13% Similarity=0.039 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHhcCCCCccccCceEEeecccchh-HHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG-SLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~-a~~l~~~~~~~~~-~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
.+|.+.+++++..+. .+..++ ++|+|+ ++.++...+.... +||.|+++.-+|......+..+|++++.+|.
T Consensus 108 ~~~e~~~~~~~G~~~-----~~~a~~--v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~ 180 (444)
T TIGR03531 108 NKLVKDFLKLLGLRS-----IKSAFV--VPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHcCCCC-----CCEEEE--ECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeee
Confidence 345555555543210 134666 789995 6666622211112 5899999999988888999999999999996
Q ss_pred -ecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhH
Q 012628 207 -YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS 285 (459)
Q Consensus 207 -~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~ 285 (459)
.+++++.+|++.++++|++..++++++++++|+ |+.....+++++|+++|++||+++|+|+||..... .
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~--------~ 250 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN--------K 250 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh--------h
Confidence 346689999999999998643245666666655 55545559999999999999999999999875321 1
Q ss_pred HHHHHh----cCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhh
Q 012628 286 VRLFAT----RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPAL 361 (459)
Q Consensus 286 ~~~~~~----~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 361 (459)
...+.. .+.-++++.|++|.+.+||+ |+++. +.++++.+.+.. ..... ..+...+.+...++..+
T Consensus 251 ~~~~~~~g~~~Grad~vv~s~hK~l~~pg~--Gg~I~-~~d~el~~~i~~----~y~g~--~~~s~~~~~~~~ll~~G-- 319 (444)
T TIGR03531 251 YMELINKAIKVGRVDAVVSSTDKNFMVPVG--GAIIY-SFDENFIQEISK----SYPGR--ASASPSLDVLITLLSLG-- 319 (444)
T ss_pred hhhhhhccccccCCCeEEEeCccCCCCCCC--EEEEE-ECCHHHHHHHHH----hccCC--CCChHHHHHHHHHHHhC--
Confidence 111111 11226778899999998887 77643 667775544433 21111 23344555555554332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 362 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
.+.++++.+++.++++++.+.|+ ++
T Consensus 320 ----~~g~~~li~~~~~~a~~l~~~L~-~l 344 (444)
T TIGR03531 320 ----SKGYLELLKERKEMYKYLKELLQ-KL 344 (444)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 34467778888888888888887 54
No 245
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.81 E-value=9.2e-18 Score=167.17 Aligned_cols=333 Identities=12% Similarity=0.063 Sum_probs=203.5
Q ss_pred cCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh------
Q 012628 101 YVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------ 174 (459)
Q Consensus 101 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~------ 174 (459)
++.|.+.+.+...+.... ..+.......++.+.+.+++....|.+-..+++.+..|+|||+|++++.......
T Consensus 52 ~~~p~~~~~~~~~l~~~~-~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKNM-IDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 347788898888885432 2222222222344433344333333310014565544799999999985333211
Q ss_pred CCC-----CEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHH
Q 012628 175 FPG-----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPE 249 (459)
Q Consensus 175 ~~g-----d~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~ 249 (459)
..| ..|++++-.+..+...++..|++++.+|+++ +++.+|++.|+++|++ ++.+|+++..+|.||.+ +
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~---~t~lV~~t~g~t~tG~i---d 203 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDE---NTIGVVCILGTTYTGEY---E 203 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhh---CCeEEEEEeCCCCCccc---C
Confidence 112 3688888889999888888999999999953 3468999999999986 68888889999999999 8
Q ss_pred HHHHHHHHHHhc------CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc-ccCCCCcceEEEEeCC
Q 012628 250 QWEKIADVIQEK------NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSS 322 (459)
Q Consensus 250 ~l~~i~~l~~~~------~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~ 322 (459)
++++|+++|+++ |+++++|.+|.++... .... .++.......-+.+..|.+|.+ ++.| +|++++ ++
T Consensus 204 pi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p-~~~~--~~~~~~~~~~~DSis~s~HK~~~~P~g--~G~l~~--r~ 276 (431)
T TIGR01788 204 DVKALNDALDEYNAKTGWDIPIHVDAASGGFIAP-FVYP--DLEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIW--RD 276 (431)
T ss_pred CHHHHHHHHHHHHhhhCCCceEEEecccHHHHHH-HhCC--CchhhcCCCCceEEEECchhccCCCCC--cEEEEE--eC
Confidence 999999999999 9999999998754310 0000 1111112223456788999976 8777 798854 33
Q ss_pred hhHHHHHHHHHHh---hccc----cccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012628 323 SDLAARVKSQLKR---LARP----MYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 395 (459)
Q Consensus 323 ~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 395 (459)
++. +...+.. +... .....+..+..++..++. +...-.+.++++.++..++.+++.+.|+ +.+
T Consensus 277 ~~~---l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~---l~~lG~~G~~~i~~~~~~la~~l~~~L~-~~~--- 346 (431)
T TIGR01788 277 EEA---LPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYN---FLRLGREGYRKIMQNSLDVARYLAEEIA-KLG--- 346 (431)
T ss_pred hHH---cchhheecccccCCCCCCcceecCchHHHHHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHH-hCC---
Confidence 331 1111110 0000 001111111111211111 0000024567888899999999999998 774
Q ss_pred CcccccC--Ccceeeec--C-----CCHHHHHHHHhcccEEE----cCC---C----cEEEc-cCChhhHHHHHHHHHHH
Q 012628 396 DWSFILR--QIGMFSFT--G-----LNKAQSDNMTNKWHVYM----TKD---G----RISLA-GLSLAKCEYLADAIIDS 454 (459)
Q Consensus 396 ~~~~~~~--~~g~f~~~--~-----l~~~~~~~ll~~~gI~v----~~g---g----Ris~~-~~~~e~i~~~~~~l~~~ 454 (459)
+|+++.+ ..+...|. + .+...+...|++.|+.+ .|. | |+++. ..+.+.++.+++.|.++
T Consensus 347 ~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~ 426 (431)
T TIGR01788 347 PFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAA 426 (431)
T ss_pred CEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 2565543 55655553 2 33334333444469863 332 3 88875 34788999999999999
Q ss_pred Hhhc
Q 012628 455 YHNV 458 (459)
Q Consensus 455 ~~~~ 458 (459)
+.++
T Consensus 427 ~~~~ 430 (431)
T TIGR01788 427 LAYL 430 (431)
T ss_pred HHhh
Confidence 8775
No 246
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=5.3e-17 Score=163.22 Aligned_cols=344 Identities=12% Similarity=0.062 Sum_probs=196.8
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCC---CCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|+..|..-..-|+. +|.|.+++.+.+++.... .| +..-..+|.+.+++..... -+.+.+ ++
T Consensus 41 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~~------~~~v~f--~~ 109 (423)
T PRK05964 41 GRELIDAISSWWVATHGHN--HPYIDQAIREQLDRLDHVIFAGF-THEPAERLAQRLVALTPGG------LDHVFF--SD 109 (423)
T ss_pred CCEEEEcchhHHhccCCCC--CHHHHHHHHHHHhhCCCcccccc-CCHHHHHHHHHHHHhCCCC------CCEEEE--eC
Confidence 3578898888543333443 789999999888652211 12 2222234444444442111 257888 99
Q ss_pred cchhHHHHHHHHHHHh------CCCCEEEEcCCCCcchHHHhhhC-C------------CCeeeeeeecCCCCCCCHHHH
Q 012628 159 SGTGSLRLAAALIERY------FPGAKVLISSPTWGNHKNIFNDA-R------------VPWSEYRYYDPKTVGLDFEGM 219 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~------~~gd~Vlv~~p~y~~~~~~~~~~-G------------~~v~~v~~~~~~~~~~d~e~l 219 (459)
+|++|++.+.++.+.+ ....+|+...-+|.+........ + ..+..+|....+....+++.+
T Consensus 110 sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l 189 (423)
T PRK05964 110 SGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDAL 189 (423)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHH
Confidence 9999999998887765 12368999998887653322211 1 112233331111011227888
Q ss_pred HHHHHcCCCCcEEEEeCC-CCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEE
Q 012628 220 IADIKAAPGGSFILLHGC-AHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELL 297 (459)
Q Consensus 220 ~~~i~~~~~~~~~ii~~~-p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 297 (459)
++.+.+.++....+++.. .++..|..+ +++.+++|.++|++||+++|+||++.+++..+ ..+... ..+..++++
T Consensus 190 ~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G---~~~a~~-~~~v~pDi~ 265 (423)
T PRK05964 190 EALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTG---TLFACE-QAGVSPDIM 265 (423)
T ss_pred HHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chhHHH-hcCCCCCee
Confidence 888865444555555544 578888765 89999999999999999999999988876432 111211 112223433
Q ss_pred EEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHH--HHh-hccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHH
Q 012628 298 VAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ--LKR-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAG 374 (459)
Q Consensus 298 ~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 374 (459)
+++|.++..++++|++++ +++..+.+... -.. ....++ +.+.++..++...|+- . ++ +...+
T Consensus 266 ---~~~K~l~gG~~p~~av~~---~~~i~~~~~~~~~~~~~~~~~T~-~~np~~~aaa~a~l~~---l---~~--~~~~~ 330 (423)
T PRK05964 266 ---CLSKGLTGGYLPLAATLC---TAEIFEAFYSDDRAKAFMHSPSY-TANPLACAAANASLDL---F---ED--EPVLE 330 (423)
T ss_pred ---eeehhhhcCcccceEEEE---cHHHHHhhhcCCcccccccCCCC-CcCHHHHHHHHHHHHH---H---Hh--cCHHH
Confidence 778999844489999866 77744444211 000 111222 2344443444333320 0 00 12345
Q ss_pred HHHHHHHHHHHHHhhcc-CCCCCcccccCCcceee-ecC-CC----H-HHHHHHHhcccEEEcCCC---cEEEcc-CChh
Q 012628 375 RIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFS-FTG-LN----K-AQSDNMTNKWHVYMTKDG---RISLAG-LSLA 442 (459)
Q Consensus 375 ~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~g~f~-~~~-l~----~-~~~~~ll~~~gI~v~~gg---Ris~~~-~~~e 442 (459)
+..++-+++.+.|+ ++ +.|. +..+...|.++. .+. .+ . .+...|++ +||.+.+.+ ||+... .+++
T Consensus 331 ~~~~~g~~l~~~l~-~l~~~~~-i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~-~Gv~v~~~~~~lR~~p~l~~t~e 407 (423)
T PRK05964 331 RVAALSAGLAEGLE-PFRDLPG-VADVRVLGAIGAVELDRPVLERDGPALRAFALE-RGVLLRPLGNTIYLMPPYIITAE 407 (423)
T ss_pred HHHHHHHHHHHHHH-hhccCCC-eEEeecccEEEEEEeccCcchhHHHHHHHHHHH-CCeEEEecCCEEEEeCCcccCHH
Confidence 55555666666666 54 2111 111223333321 122 11 2 33455555 699998765 887552 2999
Q ss_pred hHHHHHHHHHHHHhhc
Q 012628 443 KCEYLADAIIDSYHNV 458 (459)
Q Consensus 443 ~i~~~~~~l~~~~~~~ 458 (459)
+|+++++++.++++++
T Consensus 408 dId~~v~~l~~al~~~ 423 (423)
T PRK05964 408 ELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999999875
No 247
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.80 E-value=6e-17 Score=161.88 Aligned_cols=343 Identities=10% Similarity=0.011 Sum_probs=194.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCC--CCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGAD--NSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~--~~~~~~~~i~~~~t~g 159 (459)
+...||+..|.--..-+.. +|.|.+++++.++... ... ......+.+..+++.+.... .... .+.+.+ .+++
T Consensus 34 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~-~~~-~~~~~~~~~~~lae~l~~~~~~~~~~-~~~~~f-~~~s 107 (412)
T TIGR02407 34 GKEYIDFFAGAGALNYGHN--NPKLKQALIDYLADDG-IIH-SLDMATEAKREFLETFNEIILKPRGL-DYKVQF-PGPT 107 (412)
T ss_pred CCEEEEcccchhhccCCCC--CHHHHHHHHHHHhhcc-cee-ccccCcHHHHHHHHHHHHhccCccCC-CceEEE-eCCC
Confidence 3578898877542233443 7899999988875311 111 11111233333444433210 0000 123544 1489
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-CC------------CCeeeeeeecCCC-CCCCHHHHHHHHHc
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKT-VGLDFEGMIADIKA 225 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~-~~~d~e~l~~~i~~ 225 (459)
|++|++.+.++...+....+|+....+|.+....... .| ..+..+|..+... ..-+++.+++.+.+
T Consensus 108 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~ 187 (412)
T TIGR02407 108 GTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLED 187 (412)
T ss_pred chHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHh
Confidence 9999999988877665557899999888766432221 11 1223344311000 00246777877764
Q ss_pred CC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEc
Q 012628 226 AP---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (459)
Q Consensus 226 ~~---~~~~~ii~~~p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (459)
.. +....+++...+++.|. .++++.+++|.++|++||+++|+||++.+++-.+ ..+.... ....++++ +
T Consensus 188 ~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~~~-~~v~PDi~---~ 260 (412)
T TIGR02407 188 SSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTG---TFFSFEP-AGIEPDIV---C 260 (412)
T ss_pred ccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhHHhcc-cCCCCCEE---E
Confidence 21 24567777778899998 6789999999999999999999999988775321 1111111 12234433 6
Q ss_pred CCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHH---HHHH-HhCChhhHHHHHHHHHHHHHHHH
Q 012628 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGAR---IVAN-VVGNPALFDEWKAEMEMMAGRIK 377 (459)
Q Consensus 302 ~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~L~~~~~~~~~~~~~~~~~~~~~ 377 (459)
+||.++..|+|+|++++ +++. +.+. ......++ +.+.++.. ++.. +++++++ .++++++.++++
T Consensus 261 ~~K~lg~~G~pigav~~---~~~~-~~~~---~~~~~~T~-~gnpl~~aaa~a~l~~~i~~~~l----~~~~~~~g~~l~ 328 (412)
T TIGR02407 261 LSKSISGYGLPLALTLI---KPEL-DVWK---PGEHNGTF-RGNNLAFVTATAALEYYWSDDAF----EKAVQRKSEIIQ 328 (412)
T ss_pred echhccCCccceeEEEE---chhh-hccC---CCccCCCC-CccHHHHHHHHHHHHHHhcccHH----HHHHHHHHHHHH
Confidence 88999933999999976 5552 2221 11112222 33333222 2233 2444333 233344444444
Q ss_pred HHHHHHHHHHhhccCCCCCcccccCCcceeeecCCCH-----HHHHHHHhcccEEEcCCC------cEEEcc-CChhhHH
Q 012628 378 NVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNK-----AQSDNMTNKWHVYMTKDG------RISLAG-LSLAKCE 445 (459)
Q Consensus 378 ~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~-----~~~~~ll~~~gI~v~~gg------Ris~~~-~~~e~i~ 445 (459)
++.+.+.+.+. .. ....+..|+++|+.+.. ++...+++ +||.+.+.| ||+.+. .++++++
T Consensus 329 ~~l~~l~~~~~-~~------~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~-~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~ 400 (412)
T TIGR02407 329 ERLDRIVAEYP-EL------IKQVRGRGLMQGIECGDGDLAGKIAKAAFE-NGLIIETSGPNDEVIKLLPPLTIDEETLQ 400 (412)
T ss_pred HHHHHHHhhCC-Cc------eEeeecceeEEEEEecChHHHHHHHHHHHH-CCCEEeccCCCCCEEEEECCCCCCHHHHH
Confidence 43333332222 11 12234457888876631 33445555 699997643 776543 3899999
Q ss_pred HHHHHHHHHHhh
Q 012628 446 YLADAIIDSYHN 457 (459)
Q Consensus 446 ~~~~~l~~~~~~ 457 (459)
+++++|.+++++
T Consensus 401 ~~~~~l~~~l~~ 412 (412)
T TIGR02407 401 QGLDILEQAVEE 412 (412)
T ss_pred HHHHHHHHHHhC
Confidence 999999999864
No 248
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=4.6e-17 Score=160.26 Aligned_cols=217 Identities=13% Similarity=0.038 Sum_probs=146.4
Q ss_pred CCCCCCccc---HHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH---
Q 012628 120 KEYLPIEGL---AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI--- 193 (459)
Q Consensus 120 ~~Y~~~~g~---~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~--- 193 (459)
+.|+. .|. ..|++++|++..+ +++++ ++||++|+..+ +.+.+.+||+|++++|.|......
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~g~--------~~~~~--~~sG~~Ai~~a--l~all~~GD~Vl~~~~~y~~t~~~~~~ 108 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELEGG--------AGCYL--YPSGLAAVTNS--ILAFVKAGDHVLMVDSAYEPTRYFCDI 108 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHhCC--------CcEEE--ECcHHHHHHHH--HHHhcCCCCEEEEcCCCcHHHHHHHHH
Confidence 45652 343 5899999998542 46777 89999999998 555588999999999999876543
Q ss_pred -hhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC
Q 012628 194 -FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (459)
Q Consensus 194 -~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~ 272 (459)
++..|+++..++. . +.+.+++++++ +++++++++|+||||.+ .++++|+++|+++|+++|+|++|.
T Consensus 109 ~~~~~gi~v~~~d~--~-----~~e~l~~~i~~---~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 109 VLKRMGVDITYYDP--L-----IGEDIATLIQP---NTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred HHHhcCcEEEEECC--C-----CHHHHHHhcCC---CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCc
Confidence 3567877766643 1 22778888775 78999999999999988 899999999999999999999976
Q ss_pred CCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC-CCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHH
Q 012628 273 GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY-AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI 351 (459)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (459)
...... .+ ..+.++++.|++|.++-+ +...|++++ +++.++++..... ......+......
T Consensus 176 ~g~~~~------pl-----~~gaDivv~S~tK~l~G~~d~~gG~v~~---~~~~~~~l~~~~~----~~G~~l~p~~a~~ 237 (377)
T TIGR01324 176 AGLLFK------PL-----EHGVDISIQAGTKYLVGHSDIMIGTVVA---NARTWDQLREHSY----LMGQMVDADDAYT 237 (377)
T ss_pred cccccC------cc-----ccCceEEEecCceeccCCCCceEEEEEe---CHHHHHHHHHHHH----HhCCCCCHHHHHH
Confidence 533211 11 224568999999999644 355676644 6665555543221 1111223322222
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 352 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 352 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
+..-++ .+....++..++...+.+.|+ +.
T Consensus 238 ~~rgl~----------tl~~R~~~~~~~a~~la~~L~-~~ 266 (377)
T TIGR01324 238 TLRGLR----------TLGVRLKQHQESSLAIAKWLS-EQ 266 (377)
T ss_pred HHhhhh----------hHHHHHHHHHHHHHHHHHHHH-hC
Confidence 222222 234445666666666777776 54
No 249
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=3.6e-17 Score=163.48 Aligned_cols=158 Identities=16% Similarity=0.096 Sum_probs=119.3
Q ss_pred CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh----hCCCC
Q 012628 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVP 200 (459)
Q Consensus 125 ~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~----~~G~~ 200 (459)
.....+|++.+|++... +..++ +++|++++.++ +...+.+||+|+++.+.|......+. ..|++
T Consensus 57 ~pt~~~Le~~lA~l~g~--------~~~l~--~ssG~~Ai~~a--l~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~ 124 (425)
T PRK06084 57 NPTNDVLEQRVAALEGG--------VGALA--VASGMAAITYA--IQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIE 124 (425)
T ss_pred CchHHHHHHHHHHHhCC--------CceeE--ehhHHHHHHHH--HHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeE
Confidence 34457899999999542 23445 78899999998 44457899999999999985444433 24555
Q ss_pred eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012628 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (459)
Q Consensus 201 v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~ 280 (459)
+..++. .|++.+++++++ +++++++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 125 v~~~d~-------~d~e~le~ai~~---~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~--- 188 (425)
T PRK06084 125 TRFAAH-------DDIAALEALIDE---RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC--- 188 (425)
T ss_pred EEEECC-------CCHHHHHHHhcc---CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 555432 389999999976 6788888999999999965 788999999999999999997643221
Q ss_pred CChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
. .+ ....++++.|++|.++.+|.++|.+++
T Consensus 189 -~--p~-----~~gaDivv~S~tK~l~G~g~~~gG~v~ 218 (425)
T PRK06084 189 -R--PF-----EHGADIVVHSLTKYIGGHGTSIGGIVV 218 (425)
T ss_pred -C--hh-----hcCCCEEEECchhcccccccceeEEEE
Confidence 0 11 123468999999999999999999854
No 250
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.80 E-value=1.4e-16 Score=159.88 Aligned_cols=209 Identities=13% Similarity=-0.043 Sum_probs=139.3
Q ss_pred eecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHH
Q 012628 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRL 166 (459)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l 166 (459)
.|++|.+.-....+.+++.-.+++.+.+.... ..+++ ...+|++++++++.. +++++ +++||+++.+
T Consensus 27 ~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~-~~~G~--~~~~fe~~lA~~~g~--------~~~v~--~~sGt~al~~ 93 (438)
T PRK15407 27 PFVPGKSPIPPSGKVIDAKELQNLVDASLDFW-LTTGR--FNDAFEKKLAEFLGV--------RYALL--VNSGSSANLL 93 (438)
T ss_pred cccCCCCCCCcCccCCCHHHHHHHHHHHHhCc-ccCCh--hHHHHHHHHHHHhCC--------CeEEE--ECCHHHHHHH
Confidence 36777762122222334433444444443322 22222 357899999999743 35777 8999999998
Q ss_pred HHHHHH-------HhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCC
Q 012628 167 AAALIE-------RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAH 239 (459)
Q Consensus 167 ~~~~~~-------~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~ 239 (459)
+...+. .+.|||+|+++.|+|..+...+...|++++.++++ .+++.+|++.+++++++ +++++++++
T Consensus 94 aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd-~~~~~id~~~le~~i~~---~tkaVi~~~-- 167 (438)
T PRK15407 94 AFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVE-LPTYNIDASLLEAAVSP---KTKAIMIAH-- 167 (438)
T ss_pred HHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHHcCc---CCeEEEEeC--
Confidence 844332 24699999999999999999999999999999985 35788999999999875 677777543
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcC--CcCcccCCCCcceEE
Q 012628 240 NPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMN 317 (459)
Q Consensus 240 NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~~ 317 (459)
++|.. .++++|.++|++||++||+|+++......+ +. . +.... ++.+.|| +|.+. .|.. |++
T Consensus 168 -~~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~---g~-~----~G~~g-d~~~fSf~~~k~~~-~geG-G~l- 231 (438)
T PRK15407 168 -TLGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYD---GR-M----TGTFG-DIATLSFYPAHHIT-MGEG-GAV- 231 (438)
T ss_pred -CCCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcC---Ce-e----eeccC-ceEEEeCCCCCCcc-ccCc-eEE-
Confidence 56654 688999999999999999999954332110 00 1 11111 3455566 46675 4553 676
Q ss_pred EEeCChhHHHHHHH
Q 012628 318 VVCSSSDLAARVKS 331 (459)
Q Consensus 318 ~v~~~~~~~~~~~~ 331 (459)
++.++++.+++..
T Consensus 232 -~t~d~~l~~~~~~ 244 (438)
T PRK15407 232 -FTNDPLLKKIIES 244 (438)
T ss_pred -EECCHHHHHHHHH
Confidence 5677776555443
No 251
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=3.6e-17 Score=162.44 Aligned_cols=153 Identities=20% Similarity=0.187 Sum_probs=118.8
Q ss_pred cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----hhhCCCCe
Q 012628 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPW 201 (459)
Q Consensus 126 ~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~G~~v 201 (459)
.-...|.+.+|++..+ +..+. +++|+.|+.++ +.+.+.+||+|+++.++|...... +...|+++
T Consensus 61 Ptv~~lE~~la~leg~--------~~av~--~~SG~aAi~~a--l~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v 128 (432)
T PRK06702 61 PTLAAFEQKLAELEGG--------VGAVA--TASGQAAIMLA--VLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV 128 (432)
T ss_pred cHHHHHHHHHHHHhCC--------CcEEE--ECCHHHHHHHH--HHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEE
Confidence 3467899999999644 23556 89999999998 555688999999999999755554 67789998
Q ss_pred eeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012628 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (459)
Q Consensus 202 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~ 281 (459)
+.++. .+|++.++++|++ +|++|++.+|+||++.+ .++++|+++|++||+++|+|++|..-..
T Consensus 129 ~~vd~------~~d~~~l~~~I~~---~Tk~I~~e~pgnP~~~v---~Di~~I~~iA~~~gi~livD~T~~tP~~----- 191 (432)
T PRK06702 129 TFFNP------NLTADEIVALAND---KTKLVYAESLGNPAMNV---LNFKEFSDAAKELEVPFIVDNTLATPYL----- 191 (432)
T ss_pred EEECC------CCCHHHHHHhCCc---CCeEEEEEcCCCccccc---cCHHHHHHHHHHcCCEEEEECCCCchhh-----
Confidence 88853 3689999999986 78888889999999999 5588899999999999999999742111
Q ss_pred ChhHHHHHHhcCCeEEEEEcCCc-----CcccCCCCc
Q 012628 282 DASSVRLFATRGMELLVAQSYSK-----NLGLYAERI 313 (459)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK-----~~~~~G~Ri 313 (459)
.+.+ ...-+|++.|+|| ..+++|.++
T Consensus 192 ----~~pl--~~GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 192 ----CQAF--EHGANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred ----CChh--hcCCCEEEEccccccCCCcceeceEEE
Confidence 1111 2234699999999 666666655
No 252
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=3.1e-17 Score=166.14 Aligned_cols=327 Identities=13% Similarity=0.130 Sum_probs=194.4
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCC---Ccc------cHH-HHHHHHHHHhcCCCCccccCce
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP---IEG------LAA-FNKVTAELLFGADNSVLKEQRV 152 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g------~~~-lr~aia~~l~~~~~~~~~~~~i 152 (459)
...|+|...++ .++|.+++++...+.......++. ..| +++ .|+.++++++.+ ++++
T Consensus 34 ~~~l~l~~sen-------~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~------~~~~ 100 (452)
T PTZ00094 34 IEGLELIASEN-------FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLD------PEEW 100 (452)
T ss_pred HcCeeEecccc-------cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCC------cccc
Confidence 47899998775 238889999888774322112211 111 232 456777777553 4555
Q ss_pred EE-eecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh----------CCCCeeeeeeecCCCCCCCHHHHHH
Q 012628 153 AT-VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND----------ARVPWSEYRYYDPKTVGLDFEGMIA 221 (459)
Q Consensus 153 ~~-~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~----------~G~~v~~v~~~~~~~~~~d~e~l~~ 221 (459)
.+ ++.++|++++.++ +.+.+.+||+|++....+..+...... .+.++..++++ .++.+|++++++
T Consensus 101 ~~~~~~~sgt~an~~v--~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~--~~g~id~~~L~~ 176 (452)
T PTZ00094 101 GVNVQPYSGSPANFAV--YTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN--EKGLIDYDKLEE 176 (452)
T ss_pred eeecCCCchHHHHHHH--HHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC--CCCCcCHHHHHH
Confidence 44 2237899999997 344477999999987776655433211 11334445553 347899999999
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEc
Q 012628 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (459)
Q Consensus 222 ~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (459)
.+++. +++++++. ++.+|.. .++++|.++|+++|+++++|++ +.++.-+.+..... ....++++.|
T Consensus 177 ~l~~~--~~~lvi~~--~s~~g~~---~di~~I~~i~~~~ga~l~vDaa-q~~G~i~~~~~~~~------~~~~D~l~~S 242 (452)
T PTZ00094 177 LAKAF--RPKLIIAG--ASAYPRD---IDYKRFREICDSVGAYLMADIA-HTSGLVAAGVLPSP------FPYADVVTTT 242 (452)
T ss_pred HHHHh--CCCEEEEe--CCCCCCc---cCHHHHHHHHHHcCCEEEEecc-chhccccCCCCCCC------CCCCcEEEcC
Confidence 99652 33445442 4459988 6677888999999999999999 55543211110001 1135688999
Q ss_pred CCcCc-ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccc-cCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH
Q 012628 302 YSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNV 379 (459)
Q Consensus 302 ~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 379 (459)
++|++ |+.| |++++ +++..+.+...........+ ++++.....+....|+.- . ....+++++++.++
T Consensus 243 ~hK~l~GP~G---g~l~~---~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~---~--~~~~~~~~~~i~~l 311 (452)
T PTZ00094 243 THKSLRGPRS---GLIFY---RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEV---Q--SPEWKEYAKQVLKN 311 (452)
T ss_pred CccCCCCCCc---eEEEE---ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHH---h--ChhHHHHHHHHHHH
Confidence 99976 5443 77654 44433333332221111111 122222222222222110 0 12345778889999
Q ss_pred HHHHHHHHhhccCCCCCcccccC--Cccee--ee--cCCCHHHHHHHHhcccEEEcC------------CC-cEEEccCC
Q 012628 380 RQKLFDSLSAKDKSGKDWSFILR--QIGMF--SF--TGLNKAQSDNMTNKWHVYMTK------------DG-RISLAGLS 440 (459)
Q Consensus 380 ~~~l~~~L~~~~g~~~~~~~~~~--~~g~f--~~--~~l~~~~~~~ll~~~gI~v~~------------gg-Ris~~~~~ 440 (459)
+++|.+.|. +.| +++..+ ..... .+ .+.+.+.+..+++++||.+.. ++ |+|...++
T Consensus 312 ~~~l~~~L~-~~g----~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~t 386 (452)
T PTZ00094 312 AKALAAALE-KRG----YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALT 386 (452)
T ss_pred HHHHHHHHH-hCC----cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHH
Confidence 999999998 766 343321 11111 11 144667777777878999942 23 89875443
Q ss_pred -----hhhHHHHHHHHHHHHh
Q 012628 441 -----LAKCEYLADAIIDSYH 456 (459)
Q Consensus 441 -----~e~i~~~~~~l~~~~~ 456 (459)
++|++++++.|.++++
T Consensus 387 t~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 387 TRGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred hCCCCHHHHHHHHHHHHHHHH
Confidence 7999999999999886
No 253
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.79 E-value=2.3e-16 Score=158.43 Aligned_cols=345 Identities=12% Similarity=0.081 Sum_probs=194.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc-CCCCC-CCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GENKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~-Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...||+..|..-...|.. +|.|.+++++.++. ...+. +.......+|-+.+++.+....+. .+.+.+ .+++
T Consensus 38 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~---~~~~~f-~~~s 111 (425)
T PRK09264 38 GKEYIDFFAGAGALNYGHN--NPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGL---DYKVQF-TGPT 111 (425)
T ss_pred CCEeeecccchhhccCCCC--CHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCC---CceEEE-eCCC
Confidence 4578898888542333443 78899999887753 11111 111222234444444432111111 124544 1479
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhC----------C---CCeeeeeeecCCCC-CCCHHHHHHHHHc
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA----------R---VPWSEYRYYDPKTV-GLDFEGMIADIKA 225 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~----------G---~~v~~v~~~~~~~~-~~d~e~l~~~i~~ 225 (459)
|++|++.+.++.+.+....+|+....+|.+.....-.. | ..+..+|....... .-|++.+++.+.+
T Consensus 112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~ 191 (425)
T PRK09264 112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED 191 (425)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh
Confidence 99999999988876655578999998887654321111 1 12344444211000 1267788888864
Q ss_pred CC---CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEc
Q 012628 226 AP---GGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (459)
Q Consensus 226 ~~---~~~~~ii~~~p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (459)
.. +...++|+-....-.|. +++++.+++|.++|++||+++|+||++.+++..+ ..+.... .+..++++ +
T Consensus 192 ~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG---~~~~~~~-~~v~PDi~---t 264 (425)
T PRK09264 192 SSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTG---TFFSFER-AGITPDIV---T 264 (425)
T ss_pred ccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcccc---HHHHHhh-cCCCCCEE---E
Confidence 21 24556666666666776 5789999999999999999999999998876332 1222221 12234433 7
Q ss_pred CCcCcccCCCCcceEEEEeCChhHHHHHHHHHHh-hccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012628 302 YSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 380 (459)
Q Consensus 302 ~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 380 (459)
+||.++..|+++|++++ +++. . .+.. ....++ +.+.++..++...|.+ .|.+ ....++.+++.
T Consensus 265 ~~K~l~~~G~pigav~~---~~~i-~----~~~~~~~~~T~-~gnp~~~aaa~a~l~~-----~~~~--~~l~~~~~~~g 328 (425)
T PRK09264 265 LSKSISGYGLPMALVLI---KPEL-D----VWKPGEHNGTF-RGNNLAFVTATAALEE-----YWSD--DAFEKEVKAKG 328 (425)
T ss_pred eccccCCCccceEEEEE---chhh-h----ccCCCccCCCC-CCCHHHHHHHHHHHHH-----HHhh--hHHHHHHHHHH
Confidence 79999955999999966 6552 2 1211 111222 2333333333233211 0111 13444555555
Q ss_pred HHHHHHHhhcc--CCCCCcccccCCcceeeecCCC-H----HHHHHHHhcccEEEcCCC----cEEEc-c--CChhhHHH
Q 012628 381 QKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGLN-K----AQSDNMTNKWHVYMTKDG----RISLA-G--LSLAKCEY 446 (459)
Q Consensus 381 ~~l~~~L~~~~--g~~~~~~~~~~~~g~f~~~~l~-~----~~~~~ll~~~gI~v~~gg----Ris~~-~--~~~e~i~~ 446 (459)
+++.+.|+ ++ ..|. +.......|+++++.+. . .+...+++ +||.+.+.| ||.+. . .+++++++
T Consensus 329 ~~l~~~l~-~l~~~~~~-~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~ 405 (425)
T PRK09264 329 ELVRERLE-EIAAKYPG-LGAEVRGRGMMQGIDFGDGELAGKIAAEAFE-NGLIIETSGPEDEVVKLLPPLTIDEEELEE 405 (425)
T ss_pred HHHHHHHH-HHHHhCCC-ceecceecccEEEEEecChHHHHHHHHHHHH-CCCEEeccCCCCCEEEEeCCCCCCHHHHHH
Confidence 55555554 33 1111 11112334666666552 1 33455555 599997754 55554 2 37999999
Q ss_pred HHHHHHHHHhhc
Q 012628 447 LADAIIDSYHNV 458 (459)
Q Consensus 447 ~~~~l~~~~~~~ 458 (459)
++++|.++++++
T Consensus 406 ~~~~l~~~l~~~ 417 (425)
T PRK09264 406 GLDILEEAVAEV 417 (425)
T ss_pred HHHHHHHHHHHH
Confidence 999999998753
No 254
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=2e-16 Score=159.57 Aligned_cols=342 Identities=11% Similarity=0.033 Sum_probs=195.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...||+..|..-..-|+. +|.|.+++.+.+++.. .+.......+.+..+++.+....... ..+.+.+ +++|+
T Consensus 55 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f--~~sGs 127 (443)
T PRK06058 55 GNRLIDLGSGIAVTSVGNS--APRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSAL--FNSGA 127 (443)
T ss_pred CCEEEEcCcchhhhccCCC--CHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCC-CCCEEEE--eCCcH
Confidence 3568888887542333443 7899999988886521 11111122244444555543322100 0146777 89999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-CC--------C-----CeeeeeeecCCC----CCCC--------
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR--------V-----PWSEYRYYDPKT----VGLD-------- 215 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~G--------~-----~v~~v~~~~~~~----~~~d-------- 215 (459)
+|++.+.++...+...++|+...++|.++...... .+ . .+..+|.....+ ...+
T Consensus 128 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (443)
T PRK06058 128 EAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARA 207 (443)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHH
Confidence 99999988877666668999999999877533221 11 1 122222210100 0011
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCCCCC-CCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012628 216 FEGMIADIKAAPGGSFILLHGCAHNPT-GID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (459)
Q Consensus 216 ~e~l~~~i~~~~~~~~~ii~~~p~NPT-G~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (459)
++.+++.+. +++...+| ..|-+.. |.+ ++++.+++|.++|++||+++|.||++.+++..+ ..+... ..+..
T Consensus 208 ~~~l~~~~~--~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG---~~fa~~-~~gv~ 280 (443)
T PRK06058 208 ITVIEKQVG--ADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTG---AWFACE-HEGIV 280 (443)
T ss_pred HHHHHHhhC--CCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCh---hhhHHH-hcCCC
Confidence 122222222 23455555 4555555 444 468889999999999999999999999886432 122222 12233
Q ss_pred CeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHH
Q 012628 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 373 (459)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 373 (459)
++++ +++|.++ .|+++|++++ +++. .+.+.......+.+.+.+++.++...|+. + ++ +...
T Consensus 281 PDiv---~~gK~l~-~G~Pi~av~~---~~~i----~~~~~~~~~~~T~~gnpl~~aaa~a~L~~--~----~~--~~l~ 341 (443)
T PRK06058 281 PDLI---TTAKGIA-GGLPLSAVTG---RAEI----MDAPHPGGLGGTYGGNPVACAAALAAIET--I----EE--DDLV 341 (443)
T ss_pred CCEE---EEccccc-CCCccEEEEE---cHHH----HhhccCCCCCCCCCCCHHHHHHHHHHHHH--H----HH--cCHH
Confidence 4444 4589999 8999999876 7774 33333222223335566666666555431 1 01 2345
Q ss_pred HHHHHHHHHHHHHHhhccCCC-CCcccccCCcceeeec--CC-----CHH----HHHHHHhcccEEEcCCC------cEE
Q 012628 374 GRIKNVRQKLFDSLSAKDKSG-KDWSFILRQIGMFSFT--GL-----NKA----QSDNMTNKWHVYMTKDG------RIS 435 (459)
Q Consensus 374 ~~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~g~f~~~--~l-----~~~----~~~~ll~~~gI~v~~gg------Ris 435 (459)
++.+++.++|.+.|+ ++.-. +-+..+...|.++.+. .- +.+ +.+.+++ +||.+.+++ |+.
T Consensus 342 ~~~~~~g~~l~~~L~-~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~~~~~~~~~~~lr~~ 419 (443)
T PRK06058 342 ARARQIEALMTDRLR-ALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHA-AGVIVLTCGTYGNVIRLL 419 (443)
T ss_pred HHHHHHHHHHHHHHH-HHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHH-CCeEEeccCCCCCEEEEE
Confidence 666666777777776 54100 0012245566555331 11 122 2344555 699998753 664
Q ss_pred Ec-cCChhhHHHHHHHHHHHHhhc
Q 012628 436 LA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 436 ~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
.+ ..+++++++++++|.++++++
T Consensus 420 Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 420 PPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred CCCccCHHHHHHHHHHHHHHHHhC
Confidence 22 239999999999999998764
No 255
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=7.4e-17 Score=159.24 Aligned_cols=165 Identities=16% Similarity=0.172 Sum_probs=120.7
Q ss_pred ccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHhhhCCCCee
Q 012628 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPWS 202 (459)
Q Consensus 127 g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~G~~v~ 202 (459)
-...|++.++++.... ..++ +++|+.++.++ +..+.|||+|++++|.|.... ..+...|++++
T Consensus 51 ~~~~Le~~la~l~g~~-------~al~---~~SG~~Al~~~---l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~ 117 (380)
T PRK06176 51 TRFALEELIADLEGGV-------KGFA---FASGLAGIHAV---FSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCT 117 (380)
T ss_pred hHHHHHHHHHHHhCCC-------CEEE---ECCHHHHHHHH---HHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEE
Confidence 4678999999986432 3344 57777888765 345789999999999987543 34556788877
Q ss_pred eeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCC
Q 012628 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (459)
Q Consensus 203 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~ 282 (459)
.++. .|++.+++++++ +++++++++|+||||.+ .++++|+++|+++|+++|+|++|.......
T Consensus 118 ~vd~-------~d~e~l~~ai~~---~t~lV~lesP~Nptg~~---~di~~I~~la~~~gi~vivD~t~a~~~~~~---- 180 (380)
T PRK06176 118 IIDT-------SDLSQIKKAIKP---NTKALYLETPSNPLLKI---TDLAQCASVAKDHGLLTIVDNTFATPYYQN---- 180 (380)
T ss_pred EcCC-------CCHHHHHHhcCc---CceEEEEECCCCCCcee---cCHHHHHHHHHHcCCEEEEECCccccccCC----
Confidence 7754 378999998875 78889999999999999 567789999999999999999987543321
Q ss_pred hhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHH
Q 012628 283 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARV 329 (459)
Q Consensus 283 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~ 329 (459)
.+ ....++++.|++|.++.+|-.+|.++ ++.+++..+++
T Consensus 181 --p~-----~~gaDivv~S~tK~l~g~~d~~gG~v-v~~~~~~~~~~ 219 (380)
T PRK06176 181 --PL-----LLGADIVVHSGTKYLGGHSDVVAGLV-TTNNEALAQEI 219 (380)
T ss_pred --cc-----ccCCCEEEecCceeccCCccceeeEE-EecHHHHHHHH
Confidence 11 12346889999999986765555543 34555644444
No 256
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=1.3e-16 Score=156.87 Aligned_cols=217 Identities=11% Similarity=0.035 Sum_probs=143.3
Q ss_pred CCCCCCcccH---HHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----
Q 012628 120 KEYLPIEGLA---AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---- 192 (459)
Q Consensus 120 ~~Y~~~~g~~---~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~---- 192 (459)
+.|+ ..|.+ .|++.++.+-.+ +..++ +.+|++|+..+ +++.+.+||+|++++|.|+++..
T Consensus 56 y~Ys-R~gnPt~~~Le~~la~le~~-------~~~v~---~sSG~aAi~~~--l~all~~GD~Vlv~~~~Y~~~~~l~~~ 122 (395)
T PRK05967 56 YTYG-TRGTPTTDALCKAIDALEGS-------AGTIL---VPSGLAAVTVP--FLGFLSPGDHALIVDSVYYPTRHFCDT 122 (395)
T ss_pred CccC-CCCChHHHHHHHHHHHHhCC-------CCEEE---ECcHHHHHHHH--HHHhcCCCCEEEEccCCcHHHHHHHHH
Confidence 4564 33433 466666655221 34455 46689999988 56668899999999999998765
Q ss_pred HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC
Q 012628 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (459)
Q Consensus 193 ~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~ 272 (459)
.++..|+++..++.. +.+.+++++++ +++++++++|+||++.+ .++++|+++|+++|+++++|++|.
T Consensus 123 ~l~~~Gi~v~~vd~~-------~~e~l~~al~~---~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a 189 (395)
T PRK05967 123 MLKRLGVEVEYYDPE-------IGAGIAKLMRP---NTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWA 189 (395)
T ss_pred HHHhcCeEEEEeCCC-------CHHHHHHhcCc---CceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCcc
Confidence 456789888887541 34778888875 78999999999998877 999999999999999999999987
Q ss_pred CCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHH
Q 012628 273 GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARI 351 (459)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (459)
...+.. ++ ..+-++++.|.+|.++-.| .-.|++ +.+++..+++..... ......+...+..
T Consensus 190 ~p~~~~------pl-----~~GaDivv~S~tKy~~Gh~d~~~G~v---~~~~~~~~~l~~~~~----~~G~~~~p~da~l 251 (395)
T PRK05967 190 TPLYFR------PL-----DFGVDISIHAATKYPSGHSDILLGTV---SANEKCWPQLLEAHG----TLGLCAGPDDTYQ 251 (395)
T ss_pred CceecC------hh-----HcCCCEEEEecccccCCCCCeeEEEE---EcCHHHHHHHHHHHH----HcCCCCCHHHHHH
Confidence 654221 11 2245699999999975333 445544 335664444432222 1122333333222
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 352 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 352 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
+..-| +.+....++..++...+.+.|+ +.
T Consensus 252 ~~rgl----------~Tl~lR~~~~~~na~~lA~~L~-~h 280 (395)
T PRK05967 252 ILRGL----------RTMGIRLEHHRKSALEIARWLE-GR 280 (395)
T ss_pred HHcCc----------ccHHHHHHHHHHHHHHHHHHHH-hC
Confidence 22222 2244555666677777777787 55
No 257
>PLN03032 serine decarboxylase; Provisional
Probab=99.78 E-value=9.8e-17 Score=156.53 Aligned_cols=325 Identities=12% Similarity=0.047 Sum_probs=198.2
Q ss_pred eecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCC-------CcccHHHHHHHHHHHhcCCCCccccCce--EEeec
Q 012628 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-------IEGLAAFNKVTAELLFGADNSVLKEQRV--ATVQG 157 (459)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-------~~g~~~lr~aia~~l~~~~~~~~~~~~i--~~~~t 157 (459)
....|.|.+.+ ....+.+++...+.++...-+.. ..-..+.++.+++++... ++++ ++ |
T Consensus 24 ~~~~gy~~~~~----~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~------~~~~~G~f--T 91 (374)
T PLN03032 24 SVHFGYPYNLD----FDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE------KDEYWGYI--T 91 (374)
T ss_pred hhccCCCchhc----cChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC------CccCCEEE--e
Confidence 34566664332 24456777777664321111111 112245555566655432 5665 77 9
Q ss_pred ccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCC
Q 012628 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~ 237 (459)
+|||+|+.++....+...++..|+++.-.+......++..|.+++.||+ +.++.+|++.|+++|++....+.+++++.
T Consensus 92 sGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~--d~~g~id~~~L~~~i~~~~~~~~lvv~ta 169 (374)
T PLN03032 92 TCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPT--LPSGEIDYDDLERALAKNRDKPAILNVNI 169 (374)
T ss_pred CchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeee--CCCCcCcHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999988544333346678889888888888889999999999999 45678999999999986433577888888
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcC-----CeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc-cCCC
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKN-----HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAE 311 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~-----~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~ 311 (459)
.+|+||.+ +++++|+++|+++| +++++|.+|...... .....+.+. + ...-+.++.|.+|.++ +.|
T Consensus 170 gtt~tG~i---dpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p-~~~~~~~~~-~--~~~vDSis~s~HK~~g~P~g- 241 (374)
T PLN03032 170 GTTVKGAV---DDLDRILRILKELGYTEDRFYIHCDGALFGLMMP-FVSRAPEVT-F--RKPIGSVSVSGHKFLGCPMP- 241 (374)
T ss_pred cCcCCccC---CCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhh-ccCCCcccC-C--CcCCcEEEECcccccCCCcC-
Confidence 99999999 99999999999996 589999997654321 100111110 1 1124567789999998 555
Q ss_pred CcceEEEEeCChhHHHHHHHHHHhh--cccc-ccCCchH---HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 312 RIGAMNVVCSSSDLAARVKSQLKRL--ARPM-YSNPPVH---GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 312 RiG~~~~v~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~---~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
+|.+++ .....+.+.....-+ ...+ .++-+.. ...+....+. .+.+.++.++..++.+++.+
T Consensus 242 -~G~ll~---r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G--------~~g~~~~~~~~~~~a~~l~~ 309 (374)
T PLN03032 242 -CGVALT---RKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKG--------YRGIKRDVQHCMRNAHYLKD 309 (374)
T ss_pred -eEEEEE---EchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhC--------HHHHHHHHHHHHHHHHHHHH
Confidence 888865 233232221110000 0000 1111111 1111111122 24567888888889999999
Q ss_pred HHhhccCCCCCccc-ccCCcceeeecCCCHHHHHHHHhcccEEEcCCC-cEEEcc-CChhhHHHHHHHHHH
Q 012628 386 SLSAKDKSGKDWSF-ILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG-RISLAG-LSLAKCEYLADAIID 453 (459)
Q Consensus 386 ~L~~~~g~~~~~~~-~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~gg-Ris~~~-~~~e~i~~~~~~l~~ 453 (459)
.|+ +.+ +.. ..|.....+|..-..+. +.+++.+...++. ||+++. .+.+.++++++-|++
T Consensus 310 ~l~-~~~----~~~~~~p~~~~V~f~~~~~~~---~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 310 RLT-EAG----LTCRLNELSSTVVFERPMDEA---FIKKWQLACEGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred HHH-hCC----CcEEECCCceEEEEcCCCcHh---HhheeeecccCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 998 776 343 44554444554332221 3344555544433 888765 477888888888765
No 258
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=6.2e-16 Score=148.74 Aligned_cols=196 Identities=21% Similarity=0.152 Sum_probs=145.8
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEE
Q 012628 102 VLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 181 (459)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vl 181 (459)
+.....+++.+.++.++ +..-.-..+|.+++++|+.. ++.+. +++||.|++++.+.+. +.|||+||
T Consensus 13 i~~~e~~~v~~vl~sg~---i~~G~~v~~FE~~~ae~~G~--------k~ava--~~sgT~AL~laL~al~-ig~GDeVI 78 (374)
T COG0399 13 IGEEELAAVQEVLKSGW---LTGGPFVRRFEQAFAEYLGV--------KYAVA--VSSGTAALHLALLALA-IGPGDEVI 78 (374)
T ss_pred cchHHHHHHHHHHHcCC---eecChHHHHHHHHHHHHhCC--------CeEEE--ecChHHHHHHHHHhcC-CCCCCEEE
Confidence 45777888888887654 22334568999999999754 45666 8999999999955444 77999999
Q ss_pred EcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012628 182 ISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (459)
Q Consensus 182 v~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~ 261 (459)
+++-+|....+.+-..|++++.++++ .+++.+|++.++++|++ +++.|+. -+=-|.. .++++|.++|++|
T Consensus 79 ~ps~TfvATan~i~~~Ga~PVFvDid-~~T~nid~~~ie~aIt~---~tKAIip---Vhl~G~~---~dm~~i~~la~~~ 148 (374)
T COG0399 79 VPSFTFVATANAVLLVGAKPVFVDID-PDTLNIDPDLIEAAITP---RTKAIIP---VHLAGQP---CDMDAIMALAKRH 148 (374)
T ss_pred ecCCchHHHHHHHHHcCCeEEEEecC-CcccCCCHHHHHHHccc---CCeEEEE---ehhccCC---CCHHHHHHHHHHc
Confidence 99999999999999999999999996 56789999999999997 6777773 2334555 6888899999999
Q ss_pred CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcC--CcCcccCCCCcceEEEEeCChhHHHHHHHHHH
Q 012628 262 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 334 (459)
Q Consensus 262 ~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~ 334 (459)
|++||+|.+ +.++..- ....+ ... .++.++|| .|.++ +|. =|.+ ++.++++.++++....
T Consensus 149 ~l~vIEDaA-qa~Ga~y---~gk~v---Gt~--Gd~~~fSF~~~K~it-tgE-GGav--~tnd~ela~k~~~lr~ 210 (374)
T COG0399 149 GLPVIEDAA-QAHGATY---KGKKV---GSF--GDIGAFSFHATKNLT-TGE-GGAV--VTNDEELAEKARSLRN 210 (374)
T ss_pred CCeEEEEcc-hhccCee---cCccc---ccc--cceEEEEecCCCCcc-ccC-ceEE--EeCCHHHHHHHHHHHH
Confidence 999999999 6665321 00011 111 23455565 78888 552 3444 5888887777665433
No 259
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.77 E-value=5.9e-17 Score=174.33 Aligned_cols=335 Identities=13% Similarity=0.109 Sum_probs=202.5
Q ss_pred ccCCCCCCccCc-HHHHHHHHHHhhcCCC---CCCC----CCcccHHHHHHHHHHHhcCCCCccccC-ceEEeecccchh
Q 012628 92 AYRTEELQPYVL-DVVKKAENLMLERGEN---KEYL----PIEGLAAFNKVTAELLFGADNSVLKEQ-RVATVQGLSGTG 162 (459)
Q Consensus 92 ~~~~~~~~~~~~-~~v~~a~~~~~~~~~~---~~Y~----~~~g~~~lr~aia~~l~~~~~~~~~~~-~i~~~~t~ggt~ 162 (459)
.|+|..+..+.+ ..|.+++...+..... ..|. ...-+++.|+.++++++... ++ +|++ |+|+|+
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~-----~~~~VvF--tsnaT~ 108 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPP-----SDYACVF--TSGATA 108 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCc-----cceEEEE--eCChHH
Confidence 566666655434 4556655555432100 1111 12346789999999987541 23 4788 999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCcchHHH---hhhCCCCeeeeeeecC------CCCCCCH--HHHHHHHH----c--
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWGNHKNI---FNDARVPWSEYRYYDP------KTVGLDF--EGMIADIK----A-- 225 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~---~~~~G~~v~~v~~~~~------~~~~~d~--e~l~~~i~----~-- 225 (459)
++++++..+ .+.+||+|+++.-.|...... ++..|+++..+|++.+ +...+++ +.+++.++ .
T Consensus 109 alnlva~~l-~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~ 187 (805)
T PLN02724 109 ALKLVGETF-PWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKRE 187 (805)
T ss_pred HHHHHHHHC-CCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhcccc
Confidence 999985433 256899999987666554433 3456999999887411 1223333 55665532 0
Q ss_pred -CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc-----CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012628 226 -APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK-----NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (459)
Q Consensus 226 -~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~-----~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (459)
..++++++.++..+|-||.+++.+.++++.+.++++ ++++++|.+ |..++.+.+ +...+.++++
T Consensus 188 ~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaa-Q~~g~~piD---------v~~~~~Dfl~ 257 (805)
T PLN02724 188 DDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAA-KGCGTSPPD---------LSRYPADFVV 257 (805)
T ss_pred ccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehh-hhcCCCCCC---------hhhcCCCEEE
Confidence 123567999999999999998776544444333222 368999999 777654332 2233568999
Q ss_pred EcCCcCcc-cCCCCcceEEEEeCChhHHHHHHHHHHhh--------------------ccccccCCchHHHHHHHHHhCC
Q 012628 300 QSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLKRL--------------------ARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 300 ~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
.|++|.+| +.| +|++++ .++..+.+...+... .+...++++..+...+...|
T Consensus 258 ~S~HK~~GgP~G--~G~L~v---r~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal-- 330 (805)
T PLN02724 258 VSFYKIFGYPTG--LGALLV---RRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGF-- 330 (805)
T ss_pred EecceeccCCCC--ceEEEE---ehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHH--
Confidence 99999998 667 799976 555433322110000 00001122222222222222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC---CcccccC---------Ccceeeec--CC-----CHHHHHH
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK---DWSFILR---------QIGMFSFT--GL-----NKAQSDN 419 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~---~~~~~~~---------~~g~f~~~--~l-----~~~~~~~ 419 (459)
++... -.++++.++.+++.+++.+.|+ ++.... .+.++.+ +++.+.|. +. ....+.+
T Consensus 331 -~~l~~--ig~~~I~~~~~~L~~~l~~~L~-~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~ 406 (805)
T PLN02724 331 -KLLNR--LTISAIAMHTWALTHYVANSLR-NLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEK 406 (805)
T ss_pred -HHHHH--hChHHHHHHHHHHHHHHHHHHH-hccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHH
Confidence 11111 1357888999999999999998 763100 1334322 34555443 32 3556777
Q ss_pred HHhcccEEEcCC-----------------------------------------C--cEEEccC-ChhhHHHHHHHHHHHH
Q 012628 420 MTNKWHVYMTKD-----------------------------------------G--RISLAGL-SLAKCEYLADAIIDSY 455 (459)
Q Consensus 420 ll~~~gI~v~~g-----------------------------------------g--Ris~~~~-~~e~i~~~~~~l~~~~ 455 (459)
+++++||.++.| | |+||+.+ |.+|+++++++|++..
T Consensus 407 l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 407 LASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 777778877321 4 9999877 8899999999999865
No 260
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.76 E-value=2.2e-16 Score=151.70 Aligned_cols=329 Identities=16% Similarity=0.153 Sum_probs=204.2
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCC-CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~-~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
..-||+..+.--...++. +|.|.+++++.+.++. .|. |++..-++-+.+.+.+.. -+.|-+ +++||
T Consensus 53 n~YIDy~~~~Gp~ilGH~--~p~V~~Av~~~l~~G~--~fg~Pte~Ei~~Aell~~~~p~-------~e~vrf--vnSGT 119 (432)
T COG0001 53 NEYIDYVLGWGPLILGHA--HPAVVEAVQEQLERGL--SFGAPTELEVELAELLIERVPS-------IEKVRF--VNSGT 119 (432)
T ss_pred CEeeehhccCcccccCCC--CHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHhcCc-------ccEEEE--ecchh
Confidence 467777766532233443 6889999999998864 344 444334454555555322 367888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-hCC--C-----------------CeeeeeeecCCCCCCCHHHHHH
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DAR--V-----------------PWSEYRYYDPKTVGLDFEGMIA 221 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~G--~-----------------~v~~v~~~~~~~~~~d~e~l~~ 221 (459)
+|...+.++.+.+...|+|+..+-+|.++...+- .+| . .++.+|+ -|++.+++
T Consensus 120 EAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~~ 192 (432)
T COG0001 120 EATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALEE 192 (432)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHHH
Confidence 9999999998888888999999999988765543 222 1 1222332 28999999
Q ss_pred HHHcCCCCcEEEE-eCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEE
Q 012628 222 DIKAAPGGSFILL-HGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVA 299 (459)
Q Consensus 222 ~i~~~~~~~~~ii-~~~p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 299 (459)
++++.+++...|| -+-+.|- |. ...++-+++|.++|+++|.++|.||+..+|...- . ....+..-.+++.
T Consensus 193 ~~~~~g~~IAaVIvEPv~gn~-g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~--g---Gaq~~~gi~PDlt-- 264 (432)
T COG0001 193 AFEEYGDDIAAVIVEPVAGNM-GVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVAL--G---GAQGYYGVEPDLT-- 264 (432)
T ss_pred HHHHcCCcEEEEEeccccCCC-CCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCC--c---ccccccCcCcchh--
Confidence 9998655555555 4444554 55 4556669999999999999999999988776431 0 1112223334443
Q ss_pred EcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHH---hCC-hhhHHHHHHHHHHHHHH
Q 012628 300 QSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGN-PALFDEWKAEMEMMAGR 375 (459)
Q Consensus 300 ~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---L~~-~~~~~~~~~~~~~~~~~ 375 (459)
+|.|..| .|+.+|.+.+ .++.++.+...-...+..++ +-+.++..+.... |.. ++. .+++.+.
T Consensus 265 -tlGKiIG-GGlP~ga~gG---r~eiM~~~~p~g~vyqaGT~-sgnplamaAG~atl~~l~~~~~~-------y~~l~~~ 331 (432)
T COG0001 265 -TLGKIIG-GGLPIGAFGG---RAEIMEQLAPLGPVYQAGTL-SGNPLAMAAGLATLEELMTEEGV-------YERLDAL 331 (432)
T ss_pred -hhhhhhc-CCcceeeecc---HHHHHhhhCCCCCccccCCC-CCcHHHHHHHHHHHHHHHhcccH-------HHHHHHH
Confidence 7899999 9999999755 77744433332223333333 3333333333222 221 111 1233333
Q ss_pred HHHHHHHHHHHHhhccCCCCCcccccCCcceee--ecC--C---------C----HHHHHHHHhcccEEEcCCC----cE
Q 012628 376 IKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS--FTG--L---------N----KAQSDNMTNKWHVYMTKDG----RI 434 (459)
Q Consensus 376 ~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~--~~~--l---------~----~~~~~~ll~~~gI~v~~gg----Ri 434 (459)
-.++++-|.+.+. +.|+| +. +...+++|. |.. . + ..++..++++ ||++.|.. -+
T Consensus 332 ~~~L~~gl~~~~~-~~g~~--~~-v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~~ea~fl 406 (432)
T COG0001 332 GERLAEGLRAAAE-RHGIP--LT-VNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQFEAGFL 406 (432)
T ss_pred HHHHHHHHHHHHH-HhCCC--eE-EeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCccccceee
Confidence 3333444444444 55542 22 233455552 222 1 1 1345577775 99999984 66
Q ss_pred EEccCChhhHHHHHHHHHHHHhhc
Q 012628 435 SLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 435 s~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|.+. ++++|++.++++.++++++
T Consensus 407 S~ah-te~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 407 STAH-TEEDIDRTLEAADEAFKEL 429 (432)
T ss_pred eccc-CHHHHHHHHHHHHHHHHHh
Confidence 7777 9999999999999998875
No 261
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.76 E-value=9.5e-16 Score=153.44 Aligned_cols=324 Identities=15% Similarity=0.143 Sum_probs=185.8
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCC------CCcccHHHHH----HHHHHHhcCCCCccccCce
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNK----VTAELLFGADNSVLKEQRV 152 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~----aia~~l~~~~~~~~~~~~i 152 (459)
...++|-..+. +++|.+++++...+......+|+ -.....+|.+ .+++++... .-+
T Consensus 28 ~~~~~l~~sen-------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~-------~al 93 (416)
T PRK13034 28 QDHLELIASEN-------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD-------YAN 93 (416)
T ss_pred hcCeeeccccc-------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC-------ceE
Confidence 46677776553 24899999988875221111111 1234566776 888886432 222
Q ss_pred EEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcch-HHHhhh--CCCCe--eeeeeecCCCCCCCHHHHHHHHHcCC
Q 012628 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH-KNIFND--ARVPW--SEYRYYDPKTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 153 ~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~-~~~~~~--~G~~v--~~v~~~~~~~~~~d~e~l~~~i~~~~ 227 (459)
+. +++|+.|+..+ +.+.+.|||+|+++..+|... ..-++. .+... ..++++ ..++.+|++++++.++..
T Consensus 94 v~--~~SG~~A~~~~--l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~d~~~le~~l~~~- 167 (416)
T PRK13034 94 VQ--PHSGSQANGAV--YLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVD-RLTGLIDYDEVEELAKEH- 167 (416)
T ss_pred Ee--cCCcHHHHHHH--HHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccc-cccCCcCHHHHHHHHhhc-
Confidence 33 57899999988 555578999999999988762 111111 12111 233332 335679999999988652
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
++++|++..+. +|.. .++.+|.++|++||+++++|+++.-..... .. . .......+++++|++|.++
T Consensus 168 -~~klVi~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~-g~---~---~~~~~~~Di~~~s~~K~l~ 234 (416)
T PRK13034 168 -KPKLIIAGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAA-GE---H---PNPFPHAHVVTTTTHKTLR 234 (416)
T ss_pred -CCeEEEECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCccc-CC---C---CCCCCCceEEEEeCcccCC
Confidence 46677764444 4555 578888999999999999999943322211 00 0 0011235688999999994
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhcccc-ccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPM-YSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 386 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (459)
.+. -|+++ +.+++..++ +....... ..++......++...+. ... .....+.++++.++.++|.+.
T Consensus 235 g~~--GG~v~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~aa~~~al~--~~~---~~~~~~~~~~l~~~a~~l~~~ 301 (416)
T PRK13034 235 GPR--GGMIL--TNDEEIAKK----INSAVFPGLQGGPLMHVIAAKAVAFG--EAL---QPEFKTYAKQVIANAQALAEV 301 (416)
T ss_pred CCC--CeEEE--ECcHHHHHH----HHhhcCCcccCCccHHHHHHHHHHHH--HHh---ChhHHHHHHHHHHHHHHHHHH
Confidence 232 25542 334442222 22211111 11121211111111111 000 011235578888899999999
Q ss_pred HhhccCCCCCccccc--CCccee-eecC---CCHHHHHHHHhcccEEEcC----------C---C-cEEEcc-----CCh
Q 012628 387 LSAKDKSGKDWSFIL--RQIGMF-SFTG---LNKAQSDNMTNKWHVYMTK----------D---G-RISLAG-----LSL 441 (459)
Q Consensus 387 L~~~~g~~~~~~~~~--~~~g~f-~~~~---l~~~~~~~ll~~~gI~v~~----------g---g-Ris~~~-----~~~ 441 (459)
|+ +.| +++.. ++.... +.++ .+...+.+.++++||.+.+ . + |++... .++
T Consensus 302 L~-~~G----~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~ 376 (416)
T PRK13034 302 LK-ERG----YDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGE 376 (416)
T ss_pred HH-HcC----CEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCH
Confidence 98 877 44432 222222 2223 2556665566667998864 1 2 877432 368
Q ss_pred hhHHHHHHHHHHHHhh
Q 012628 442 AKCEYLADAIIDSYHN 457 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~ 457 (459)
+++++++++|++++.+
T Consensus 377 ~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 377 AEFREIANWILDVLDD 392 (416)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988864
No 262
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.76 E-value=1.2e-15 Score=151.54 Aligned_cols=337 Identities=11% Similarity=0.005 Sum_probs=197.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...+||..|..-+.-+.. .|.|.+++.+.+++.. +.+ .....+....+++++....+ .+.+++ +++|+
T Consensus 35 G~~~lD~~sg~~~~~lGh~--~p~v~~a~~~q~~~~~-~~~--~~~~~~~~~~la~~l~~~~~----~~~v~f--~~SGs 103 (395)
T PRK03715 35 GKRYLDFIQGWAVNCLGHC--NPGMVEALAAQAEKLI-NPS--PAFYNEPMAKLAGLLTQHSC----FDKVFF--ANSGA 103 (395)
T ss_pred CCEEEECCcChhhccCCCC--CHHHHHHHHHHHHhcc-ccc--ccccCHHHHHHHHHHhhccC----CCEEEE--eCCcH
Confidence 4578999887543344554 6889999888775422 212 12234566778888754321 357888 99999
Q ss_pred hHHHHHHHHHHHhC----CC-CEEEEcCCCCcchHH-HhhhCCCCee---eeeeecC--CCCCCCHHHHHHHHHcCCCCc
Q 012628 162 GSLRLAAALIERYF----PG-AKVLISSPTWGNHKN-IFNDARVPWS---EYRYYDP--KTVGLDFEGMIADIKAAPGGS 230 (459)
Q Consensus 162 ~a~~l~~~~~~~~~----~g-d~Vlv~~p~y~~~~~-~~~~~G~~v~---~v~~~~~--~~~~~d~e~l~~~i~~~~~~~ 230 (459)
+|++.+.++...+. +| .+|+..+.+|.+..- .+...|.... ..|.... .....|++.+++.+.+ .+
T Consensus 104 eA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~ 180 (395)
T PRK03715 104 EANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD---KT 180 (395)
T ss_pred HHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC---Cc
Confidence 99999988876542 23 678888988876532 3333332211 1111000 0002478899888864 56
Q ss_pred EEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC
Q 012628 231 FILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 231 ~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (459)
.++++...++..|... +++.+++|.++|++||+++|+||++.+++-.+ ..+.... .+..+++ .+|+|.++ .
T Consensus 181 aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG---~~~a~~~-~gv~PDi---~t~gK~lg-~ 252 (395)
T PRK03715 181 VAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTG---TLFAYEL-SGIEPDI---MTLGKGIG-G 252 (395)
T ss_pred eEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCc---chhhHhh-cCCCCce---eeehhhhh-C
Confidence 6777777777778764 68889999999999999999999998875322 1222222 2223343 37899999 6
Q ss_pred CCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012628 310 AERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 389 (459)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 389 (459)
|+.+|.+.+ +++. ..........++. .+.++..++...|+ .. ++ +...++.+++.+++.+.|+
T Consensus 253 G~p~~av~~---~~~i----~~~~~~~~~~T~~-g~pl~~aaala~L~---~l---~~--~~l~~~~~~~g~~l~~~L~- 315 (395)
T PRK03715 253 GVPLAALLA---KAEV----AVFEAGDQGGTYN-GNPLMTAVGVAVIS---QL---LA--PGFLEGVRARGEYLKEKLL- 315 (395)
T ss_pred CcceEEEEE---cccc----ccccCCCcCCCCC-CCHHHHHHHHHHHH---HH---Hh--ccHHHHHHHHHHHHHHHHH-
Confidence 888999865 5553 2111111223332 23333333333321 10 00 2345566666666666666
Q ss_pred ccCCCCCcccccCCcceeeecCC--C-HHHHHHHHhcc---cEEEcCCC----cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 390 KDKSGKDWSFILRQIGMFSFTGL--N-KAQSDNMTNKW---HVYMTKDG----RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 390 ~~g~~~~~~~~~~~~g~f~~~~l--~-~~~~~~ll~~~---gI~v~~gg----Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
++....++..+...| .++-+.+ + ...+...+.+. ||.+.+.+ ||+... .+++++++++++|.++++++
T Consensus 316 ~l~~~~~i~~vrG~G-lm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 316 ELSEERGLEGERGEG-LLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred HHhhcCCcCeEEcce-eEEEEEecCchHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 541111122233333 3322222 1 12233223334 99986443 777553 39999999999999999876
No 263
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.76 E-value=1.7e-16 Score=155.94 Aligned_cols=310 Identities=15% Similarity=0.054 Sum_probs=185.7
Q ss_pred CCccCcHHHHHHHHHHhhcC---CCCCCCCC-------cccHHHHHHHHHHHhcCCCCccccCceEEeeccc-chhHHHH
Q 012628 98 LQPYVLDVVKKAENLMLERG---ENKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRL 166 (459)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~---~~~~Y~~~-------~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g-gt~a~~l 166 (459)
++..+|+.|.+++.+.+... ....|... .-+.+.|+.++++++... +++|++ |.| +|++++.
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~-----~~~vvf--~~gs~T~a~~~ 78 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPD-----NYKVLF--LQGGATGQFAA 78 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CceEEE--EcCCchHHHHH
Confidence 34456899999999877320 00111111 336788999999986421 577888 888 9999999
Q ss_pred HHHHHHHhC---CCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCC-HHHHHHHHHcCCCCcEEEEeCCCCCCC
Q 012628 167 AAALIERYF---PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLD-FEGMIADIKAAPGGSFILLHGCAHNPT 242 (459)
Q Consensus 167 ~~~~~~~~~---~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d-~e~l~~~i~~~~~~~~~ii~~~p~NPT 242 (459)
+ +...+. +||.|++ .|....+..+++..|++++.++.+++..+ .+ ++..+..++ ++++++.+++..|.|
T Consensus 79 ~--~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~---~~~~lV~~~h~~t~t 151 (355)
T cd00611 79 V--PLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLA---PDAAYVHYCSNETIH 151 (355)
T ss_pred H--HHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCC---CCCCEEEEeCCcccc
Confidence 8 344455 4555443 22222334477888999999987422111 13 222223333 367888889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 243 GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 243 G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
|..++ ++++.||+++++|.+ |.++..+.+. +..+ +.+.|..|.||++| +|++++ +
T Consensus 152 G~~~~--------~i~~~~g~~~~VDa~-qs~g~~~idv---------~~~~--~~~ss~~K~lGP~G--~g~l~~---~ 206 (355)
T cd00611 152 GVEFD--------EVPDTGGVPLVADMS-SNILSRPIDV---------SKFG--VIYAGAQKNLGPAG--VTVVIV---R 206 (355)
T ss_pred cEEcc--------eecccCCCeEEEEcc-ccccCCCCCH---------HHhC--EEEeecccccCCCc--eEEEEE---C
Confidence 99732 344569999999999 7777543321 1222 34466899999988 788877 7
Q ss_pred hhHHHHHHHHH------Hh-hccc-cccCCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcc-C
Q 012628 323 SDLAARVKSQL------KR-LARP-MYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKD-K 392 (459)
Q Consensus 323 ~~~~~~~~~~~------~~-~~~~-~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~-g 392 (459)
++..+++.... .. .... ...+++..+..+....|+ +.. .+ .++.+.++++++.+++++.|+ ++ |
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~---~l~--~~gg~e~i~~~~~~l~~~l~~~l~-~~~g 280 (355)
T cd00611 207 KDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLK---WLK--EQGGVEAMEKRNRQKAQLLYDTID-NSNG 280 (355)
T ss_pred HHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHH---HHH--HcCCHHHHHHHHHHHHHHHHHHHH-hCcc
Confidence 77554433210 00 0111 122344333333333321 111 12 368889999999999999999 88 5
Q ss_pred CCCCccccc--CCc-ceeeec--CC--CHHHHHHHHhcccEEEcCC----C--cEEEccC-ChhhHHHHHHHHHHHH
Q 012628 393 SGKDWSFIL--RQI-GMFSFT--GL--NKAQSDNMTNKWHVYMTKD----G--RISLAGL-SLAKCEYLADAIIDSY 455 (459)
Q Consensus 393 ~~~~~~~~~--~~~-g~f~~~--~l--~~~~~~~ll~~~gI~v~~g----g--Ris~~~~-~~e~i~~~~~~l~~~~ 455 (459)
+-. .... ... ..+.|. +. +.++...+.+ .|+.+.++ | |+|+... ++|||++++++|+++.
T Consensus 281 l~~--~~~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r-~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 281 FYR--GPVDKRARSRMNVPFRLGKEELEKEFLKEAEA-AGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred ccc--cCCCHHHcCceEEEEEcCChhhhHHHHHHHHH-CCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 310 1111 122 223332 32 2333344444 69975544 3 9998776 8899999999998853
No 264
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.76 E-value=6e-16 Score=151.55 Aligned_cols=340 Identities=14% Similarity=0.102 Sum_probs=207.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC--CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...|||..|...-.-++. +|.|.+++++.++.- ....|.+.+..-++-+.+.+.+-+. ..+.+++ +++
T Consensus 55 G~~ylDf~sgi~v~~~GH~--hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~-----~~~~~~f--~~s 125 (447)
T COG0160 55 GNEYLDFLSGIAVLNLGHN--HPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGS-----GLKKVFF--GNS 125 (447)
T ss_pred CCEEEEcccCcchhccCCC--CHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcc-----cCCeEEe--cCC
Confidence 4578899987653344543 799999998877542 2244444344445555555554332 1467888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh-h-------------hCCCCeeeeeeecCC--CCCC--------C
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-N-------------DARVPWSEYRYYDPK--TVGL--------D 215 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~-~-------------~~G~~v~~v~~~~~~--~~~~--------d 215 (459)
|++|++++.++......+..||...-.|.+..... . .....+..+|+...- .+.. .
T Consensus 126 GaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 126 GAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHH
Confidence 99999999999877777789999998886432221 1 111235666653211 1111 2
Q ss_pred HHHHHHHHHc---CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh
Q 012628 216 FEGMIADIKA---APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (459)
Q Consensus 216 ~e~l~~~i~~---~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~ 291 (459)
.+.++..+.. .+.....+|+-..+...|.+ .+++-++++.++|++||+++|+||+..+++-. ...|++..+ +
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRT---G~~fa~E~~-g 281 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRT---GKMFAFEHF-G 281 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc---ccchhhhhc-C
Confidence 3334443333 23456777778888888865 55666999999999999999999998888754 245554333 2
Q ss_pred cCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q 012628 292 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 371 (459)
Q Consensus 292 ~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~ 371 (459)
-.++++ +++|.+| .|+.+|.++. .++ +.+.......+++ .-+.++..++...|+- + |+ +.
T Consensus 282 v~PDiv---t~aK~ig-~G~Pl~avv~---r~e----i~~~~~g~~~~Tf-~GNpva~Aaa~AvL~v--i---e~---e~ 341 (447)
T COG0160 282 VEPDIV---TLAKSLG-GGLPLSAVVG---RAE----IMDWPPGGHGGTF-GGNPVACAAALAVLDV--I---EE---EN 341 (447)
T ss_pred CCCCEE---Eeccccc-CCCceeEEec---cHH----hcccCCcccCCCC-CcCHHHHHHHHHHHHH--H---HH---cc
Confidence 345555 7899999 5999999866 777 4442222222333 3344444444443321 1 11 24
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCcccccCC--cceeeecCC---------C----HHHHHHHHhcccEEEcCCC----
Q 012628 372 MAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ--IGMFSFTGL---------N----KAQSDNMTNKWHVYMTKDG---- 432 (459)
Q Consensus 372 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~--~g~f~~~~l---------~----~~~~~~ll~~~gI~v~~gg---- 432 (459)
..++.++.-++|.+.|. ++.- .+..+..- -|+++-+.+ + ...+.++++ .|+.+..+|
T Consensus 342 L~~~a~~~G~~l~~~L~-~l~~--~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~-~Glil~~~G~~~n 417 (447)
T COG0160 342 LLERAAELGEYLRDRLE-ELQE--KHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFE-RGLLLLTCGPHGN 417 (447)
T ss_pred HHHHHHHHHHHHHHHHH-HHHh--hcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHH-cCCEEeccCCCCc
Confidence 45555556666666665 4421 01222221 234433211 2 233556666 599888876
Q ss_pred --cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 433 --RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 433 --Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
||... .+++|+++.+++.|.++++++
T Consensus 418 viRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 418 VLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 77643 238999999999999999865
No 265
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=1.6e-15 Score=152.82 Aligned_cols=340 Identities=13% Similarity=0.082 Sum_probs=192.8
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCC--CCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-..-++. +|.|.+++.+.++..... .+.+.....+|.+.+++...... .+.|.+ +++
T Consensus 41 G~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~~v~f--~~S 111 (445)
T PRK08593 41 GKTYIDLLASASSQNVGHA--PPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDF-----EKRVTF--GLS 111 (445)
T ss_pred CCEEEECCccHHhhcCCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC-----CCEEEE--CCc
Confidence 3567888777542233443 789999998888653111 11233334455555655532110 257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-hhhCC-------------CCeeeeeeecCCC--CC-CC-------
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR-------------VPWSEYRYYDPKT--VG-LD------- 215 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~-~~~~G-------------~~v~~v~~~~~~~--~~-~d------- 215 (459)
|++|++.+.++.+.+....+|+..+-+|.+.... +...+ ..++.+|..+... +. .+
T Consensus 112 GseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 191 (445)
T PRK08593 112 GSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEY 191 (445)
T ss_pred hHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHH
Confidence 9999999988876665556788888888765322 21111 1123344311100 00 11
Q ss_pred HHHHHHHHHcC--CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012628 216 FEGMIADIKAA--PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (459)
Q Consensus 216 ~e~l~~~i~~~--~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (459)
++.+++.+... ++....+|+...+...|.+ ++++.+++|.++|++||+++|+||++.+++..+ ..+....+ ..
T Consensus 192 ~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG---~~~a~~~~-gv 267 (445)
T PRK08593 192 LAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTG---KWSSISHF-NI 267 (445)
T ss_pred HHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hHHHHHhc-CC
Confidence 23444444321 2356777777778888886 788889999999999999999999998886432 12222222 22
Q ss_pred CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHH
Q 012628 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMM 372 (459)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 372 (459)
.++++ +++|.++ .|+++|++++ +++..+.+.. .....++ +.+.+++.++...|+- . ++ +..
T Consensus 268 ~pDi~---t~gK~l~-~G~p~gav~~---~~~i~~~~~~---~~~~~T~-~~~pl~~aaa~a~l~~---l---~~--~~l 328 (445)
T PRK08593 268 TPDLM---SFGKSLA-GGMPMSAIVG---RKEIMESLEA---PAHLFTT-GANPVSCAAALATIDM---I---ED--ESL 328 (445)
T ss_pred CCCEe---eeccccc-CCcccEEEEE---cHHHHhhhcc---CCCCCCC-CCCHHHHHHHHHHHHH---H---Hh--ccH
Confidence 33433 7899998 7899999866 7774443321 1111222 3344444444333321 0 00 123
Q ss_pred HHHHHHHHHHHHHHHhhcc----CCCCCcccccCCcceeee--cC-----C-C----HHHHHHHHhcccEEEcCC-C---
Q 012628 373 AGRIKNVRQKLFDSLSAKD----KSGKDWSFILRQIGMFSF--TG-----L-N----KAQSDNMTNKWHVYMTKD-G--- 432 (459)
Q Consensus 373 ~~~~~~~~~~l~~~L~~~~----g~~~~~~~~~~~~g~f~~--~~-----l-~----~~~~~~ll~~~gI~v~~g-g--- 432 (459)
.++.+++-++|.+.|+ ++ +. +..+.-.|.++.+ .. . + ..+...+++ +||.+.+. +
T Consensus 329 ~~~~~~~g~~l~~~L~-~l~~~~~~---v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~~~l 403 (445)
T PRK08593 329 LQRSAEKGEYARKRFD-QWVSKYNF---VGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVIIAVAGNVL 403 (445)
T ss_pred HHHHHHHHHHHHHHHH-HHHhcCCc---EEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEeccCCCEE
Confidence 3444445555555554 33 21 1112222222211 11 0 1 133455655 69999763 3
Q ss_pred cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 433 RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 433 Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
|++.+. .++++++++++++.++++++
T Consensus 404 r~~p~l~~t~~~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 404 RFQPPLVITYEQLDTALNTIEQAFTAL 430 (445)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 666543 29999999999999998764
No 266
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.75 E-value=1.8e-15 Score=152.58 Aligned_cols=339 Identities=12% Similarity=0.026 Sum_probs=192.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CC-CCCCCcccHHHHHHHHHHHhcCCCCccccCc-eEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK-EYLPIEGLAAFNKVTAELLFGADNSVLKEQR-VATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~-~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~-i~~~~t~ 158 (459)
+...+|+..|..-..-++. +|.|.+++.+.++... .+ .+.+.....+|-+.+++...... .... +++ ++
T Consensus 38 G~~ylD~~~g~~~~~lGh~--~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~----~~~~~~f~--~~ 109 (442)
T TIGR00709 38 GKEYLDFLAGAGTLALGHN--HPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRK----MDYKLQFP--GP 109 (442)
T ss_pred CCEEEEccccHhhhcCCCC--CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcC----CCccEEEe--CC
Confidence 4578899888653333443 7889999988876522 11 12233333344444544421100 0123 444 68
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-CC------------CCeeeeeeecCCCCCC--------CH-
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKTVGL--------DF- 216 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~~~~--------d~- 216 (459)
+|++|++.+.++...+....+|+....+|.+....... .| ..+..+|.. +.... +.
T Consensus 110 sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 110 SGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPFGIGGEAGSN 187 (442)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccccCCchhHHH
Confidence 99999999998887765557899999988776433332 11 112333331 11111 11
Q ss_pred ---HHHHHHHHc---C-CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH
Q 012628 217 ---EGMIADIKA---A-PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (459)
Q Consensus 217 ---e~l~~~i~~---~-~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~ 289 (459)
+.+++.+.. . .+.+.+++-+.++|+....++++.+++|.++|++||+++|.||+|.+++..+ ..+....+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~~~~ 264 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSG---TMFAFEHA 264 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCC---chhHHHHc
Confidence 123333321 1 1234445545455555556899999999999999999999999999997542 23343332
Q ss_pred HhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012628 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 369 (459)
Q Consensus 290 ~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~ 369 (459)
+..+++++ ++|.++. |+++|++++ +++ .+.+. ...... +.+.+.+++.++...|+. +. +
T Consensus 265 -gv~PDiv~---~gK~l~~-G~Pigav~~---~~~-~~~~~---~~~~~~-T~~gnpla~aaa~a~L~~--i~----~-- 323 (442)
T TIGR00709 265 -GIEPDFVV---MSKAVGG-GLPLAVLLI---APE-FDAWQ---PAGHTG-TFRGNQLAMVTGTEALNY--WK----D-- 323 (442)
T ss_pred -CCCCcEEE---EcccccC-CcccEEEEE---chH-HhccC---CCcCCC-CCCcCHHHHHHHHHHHHH--HH----h--
Confidence 33345443 8999995 999999965 555 33321 111222 335566666666555531 11 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc--CCCCCcccccCCcceeee--cCC------------C----HHHHHHHHhcccEEEc
Q 012628 370 EMMAGRIKNVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSF--TGL------------N----KAQSDNMTNKWHVYMT 429 (459)
Q Consensus 370 ~~~~~~~~~~~~~l~~~L~~~~--g~~~~~~~~~~~~g~f~~--~~l------------~----~~~~~~ll~~~gI~v~ 429 (459)
+...++.+++.++|.+.|+ ++ ..|. +..+...|.++.. ..- + ..+...+++ +||.+.
T Consensus 324 ~~l~~~~~~~g~~l~~~L~-~l~~~~~~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~ 400 (442)
T TIGR00709 324 DNLAQNAQERGERITSFLD-DMIKEHPC-IGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFE-NGLLLE 400 (442)
T ss_pred cCHHHHHHHHHHHHHHHHH-HHHHhCCC-eeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHH-CCeEEe
Confidence 2344566666677777666 43 1110 1122233333321 110 0 112334445 699987
Q ss_pred CC---C---cEEEcc-CChhhHHHHHHHHHHHHhh
Q 012628 430 KD---G---RISLAG-LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 430 ~g---g---Ris~~~-~~~e~i~~~~~~l~~~~~~ 457 (459)
+. | |+..+- .++++++++++++.+++.+
T Consensus 401 ~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 401 TGGREGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred ecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 65 3 665442 3999999999999998865
No 267
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.2e-15 Score=152.77 Aligned_cols=156 Identities=17% Similarity=0.113 Sum_probs=120.6
Q ss_pred ccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHhhhCCCCee
Q 012628 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARVPWS 202 (459)
Q Consensus 127 g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~G~~v~ 202 (459)
-..+|++.+|++... +..++ +++|++|+.++ +...+.+||+|+++.++|... ...+...|++++
T Consensus 64 ~~~~le~~lA~l~g~--------~~al~--~~SG~~Ai~~a--l~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~ 131 (427)
T PRK05994 64 TNAVLEERVAALEGG--------TAALA--VASGHAAQFLV--FHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVR 131 (427)
T ss_pred cHHHHHHHHHHHhCC--------CcEEE--EcCHHHHHHHH--HHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEE
Confidence 457889999998643 23455 79999999988 444578999999999999853 344667899988
Q ss_pred eeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCC
Q 012628 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (459)
Q Consensus 203 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~ 282 (459)
.++. .|++.+++++++ +++++++++|+||||.++ ++++|+++|+++|+++|+|++|...... .
T Consensus 132 ~vd~-------~d~~~l~~ai~~---~tklV~vesp~NptG~v~---dl~~I~~la~~~gi~livD~a~a~~~~~----~ 194 (427)
T PRK05994 132 WADA-------DDPASFERAITP---RTKAIFIESIANPGGTVT---DIAAIAEVAHRAGLPLIVDNTLASPYLI----R 194 (427)
T ss_pred EECC-------CCHHHHHHhcCc---CCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCccccccC----C
Confidence 8865 278999998875 788899999999999995 5788999999999999999997532211 0
Q ss_pred hhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 283 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 283 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
.+ ...-++++.|++|.+|.+|-.+|.+++
T Consensus 195 --pl-----~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 195 --PI-----EHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred --cc-----ccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 11 123468899999999978877887754
No 268
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.75 E-value=3.4e-15 Score=146.20 Aligned_cols=316 Identities=13% Similarity=0.093 Sum_probs=197.5
Q ss_pred HHHHHH-HHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEE
Q 012628 104 DVVKKA-ENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (459)
Q Consensus 104 ~~v~~a-~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv 182 (459)
+.+.++ +..+.. +. ..|.....+.+|.+++++++.. +++++ |++||.|++++ ....+.|||.|
T Consensus 50 ~aMs~~q~a~~~~-GD-e~yag~~s~~~lE~~va~~~G~--------~~av~--v~sGT~Al~ll--~~l~l~pGDeV-- 113 (450)
T TIGR02618 50 NAMSDKQWAGLMM-GD-EAYAGSRNFYHLERTVRELYGF--------KYVVP--THQGRGAENLL--SQIAIKPGDYV-- 113 (450)
T ss_pred HHHHHHHHHHhhh-cc-hhhcCCCcHHHHHHHHHHHHCC--------CeEEE--cCCHHHHHHHH--HHhCCCCcCEE--
Confidence 555555 444442 22 3588888889999999999743 56888 99999999986 33346799977
Q ss_pred cCCCCc-chHHHhhhCCCCeeeeeee--------cCCCCCCCHHHHHHHHHcCC-CCcEEEEeCCCCC-CCCCCCCHHHH
Q 012628 183 SSPTWG-NHKNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHN-PTGIDPTPEQW 251 (459)
Q Consensus 183 ~~p~y~-~~~~~~~~~G~~v~~v~~~--------~~~~~~~d~e~l~~~i~~~~-~~~~~ii~~~p~N-PTG~~~s~~~l 251 (459)
+.++|. .+...++..|+.++.++.+ .+.++.+|++.++++|++.. +++.++.+.+++| ..|..+|.+++
T Consensus 114 psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l 193 (450)
T TIGR02618 114 PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANM 193 (450)
T ss_pred CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHH
Confidence 667774 4444478889876666443 13467899999999998632 2333455555677 55899999999
Q ss_pred HHHHHHHHhcCCeeEEeccCCC-CCCC------C-CCCChhHH-HHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 252 EKIADVIQEKNHIPFFDVAYQG-FASG------S-LDNDASSV-RLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 252 ~~i~~l~~~~~~~ii~Deay~~-~~~~------~-~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
++|.++|++||+.+|.|.+... -++- + .+.+.+-+ +.+... -+.+..|..|..+.+ +|.+++ .++
T Consensus 194 ~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~--aD~~~~S~~Kd~~~~---~GG~l~-~~d 267 (450)
T TIGR02618 194 REVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSY--ADGCTMSGKKDCLVN---IGGFLC-MND 267 (450)
T ss_pred HHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhcc--CcEEEEeeccCCCCC---CceEEE-eCC
Confidence 9999999999999999999432 1110 0 01111111 222222 234778999997755 566643 578
Q ss_pred hhHHHHHHHHHHhhccccccCCchHHH---HHHHHHhCChhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 012628 323 SDLAARVKSQLKRLARPMYSNPPVHGA---RIVANVVGNPALFDEWKAEME-MMAGRIKNVRQKLFDSLSAKDKSGKDWS 398 (459)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 398 (459)
+++.+++....... .++. ....++. .+.+..|. +.++ ...++-....++|.+.|. +.| +.
T Consensus 268 ~~l~~k~r~~~~~~-eG~~-tyGgla~r~~~ala~gL~---------e~~~~~y~~~r~~~a~~La~~L~-~~G----vp 331 (450)
T TIGR02618 268 DEMFQSAKELVVVF-EGMP-SYGGLAGRDMEAMAIGIR---------EAVDYEYIEHRVKQVRYLGDKLK-AAG----VP 331 (450)
T ss_pred HHHHHHHHHHhhhc-CCcc-ccCchhhhhHHHHHHHHH---------HhhhHHHHHHHHHHHHHHHHHHH-HCC----Cc
Confidence 88766665543322 1111 1112121 11122221 1122 222223335778889998 888 46
Q ss_pred cccCCcceeeecC-------CC------HHHHHHHHhcccEEEcCC-----------C----------cEEEcc--CChh
Q 012628 399 FILRQIGMFSFTG-------LN------KAQSDNMTNKWHVYMTKD-----------G----------RISLAG--LSLA 442 (459)
Q Consensus 399 ~~~~~~g~f~~~~-------l~------~~~~~~ll~~~gI~v~~g-----------g----------Ris~~~--~~~e 442 (459)
++.|.+|.-+|++ +. ..++..|..+.||--..- | |+++.- +|.+
T Consensus 332 v~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~ 411 (450)
T TIGR02618 332 IVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYA 411 (450)
T ss_pred ccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHh
Confidence 6667777666653 21 244556666778743321 1 777652 4889
Q ss_pred hHHHHHHHHHHHHhh
Q 012628 443 KCEYLADAIIDSYHN 457 (459)
Q Consensus 443 ~i~~~~~~l~~~~~~ 457 (459)
++++++++|..+.++
T Consensus 412 h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 412 HMDVVADGIIKLYKH 426 (450)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998765
No 269
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.75 E-value=2e-15 Score=152.30 Aligned_cols=331 Identities=15% Similarity=0.103 Sum_probs=193.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...||+..|......++. +|.|.+++.+.++..... ..+..-..+|-+.+++.+.. .+.+.+ +++|+
T Consensus 98 G~~yiD~~~g~g~~~lGh~--~p~v~~av~~ql~~~~~~-~~~~~~~~~lAe~l~~~~p~-------~~~v~f--~~SGs 165 (474)
T PLN02482 98 GNEYIDYVGSWGPAIIGHA--DDEVLAALAETMKKGTSF-GAPCLLENVLAEMVIDAVPS-------VEMVRF--VNSGT 165 (474)
T ss_pred CCEEEEecccccccccCCC--CHHHHHHHHHHHhhCCCC-CCCCHHHHHHHHHHHHhCCC-------CCEEEE--eCChH
Confidence 3467888777532223443 689999999988764322 22332223444444443211 367888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-hC-------------CC------CeeeeeeecCCCCCCCHHHHHH
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DA-------------RV------PWSEYRYYDPKTVGLDFEGMIA 221 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~-------------G~------~v~~v~~~~~~~~~~d~e~l~~ 221 (459)
+|++.+.++.+.+...++|+...-+|.++...+- .. |. .+..+|. -|++.+++
T Consensus 166 EA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~ 238 (474)
T PLN02482 166 EACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKK 238 (474)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHH
Confidence 9999999888777666789999988887642211 10 10 0111111 17888998
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEE
Q 012628 222 DIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (459)
Q Consensus 222 ~i~~~~~~~~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (459)
.+...++....+|+.....-.|.+. +++.|++|.++|++||+++|+||+..++..+ ..... ...+..++++
T Consensus 239 ~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g----~~ga~-~~~gv~PDi~--- 310 (474)
T PLN02482 239 LFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIA----YGGAQ-EYFGITPDLT--- 310 (474)
T ss_pred HHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecC----cchHh-HHhCCCCCEE---
Confidence 8875444566666666666678665 4788999999999999999999998776432 11121 2223334443
Q ss_pred cCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHH---HHhCChhhHHHHHHHHHHHHHHHH
Q 012628 301 SYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAGRIK 377 (459)
Q Consensus 301 S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~ 377 (459)
+|+|.+| .|+.+|.+.+ +++.++.+...-......++ +.+.++..++. ..++++ ...++..
T Consensus 311 t~gK~lg-gG~Pigav~g---~~ei~~~~~~~~~~~~~~T~-~gnpl~~aAala~L~~l~~~-----------~~~~~~~ 374 (474)
T PLN02482 311 TLGKVIG-GGLPVGAYGG---RREIMEMVAPAGPMYQAGTL-SGNPLAMTAGIHTLKRLQQP-----------GTYEYLD 374 (474)
T ss_pred Eecchhh-CCCceEEEEE---cHHHHHhhccCCCcccccCc-chhHHHHHHHHHHHHHHhcc-----------CHHHHHH
Confidence 7899999 8899999865 77744443211001111222 22333333332 233332 2334444
Q ss_pred HHHHHHHHHHhhccCCCCCcccc-cCCcceeee-c--C-C---------CH----HHHHHHHhcccEEEcCCC----cEE
Q 012628 378 NVRQKLFDSLSAKDKSGKDWSFI-LRQIGMFSF-T--G-L---------NK----AQSDNMTNKWHVYMTKDG----RIS 435 (459)
Q Consensus 378 ~~~~~l~~~L~~~~g~~~~~~~~-~~~~g~f~~-~--~-l---------~~----~~~~~ll~~~gI~v~~gg----Ris 435 (459)
++-++|.+.|+ ++....++.+. ...+|+|.. . + . +. .+...+++ +||++.+.+ -++
T Consensus 375 ~~g~~l~~~L~-~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~~~~~~~~~~~ps 452 (474)
T PLN02482 375 KITKKLIQGIL-EAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVYLAPSQFEAGFTS 452 (474)
T ss_pred HHHHHHHHHHH-HHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeEEeccCCCCCcCC
Confidence 45555555554 43210001222 222344411 1 1 0 11 23456666 599998864 256
Q ss_pred EccCChhhHHHHHHHHHHHHhhc
Q 012628 436 LAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 436 ~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+.. ++++|+++++++.++++++
T Consensus 453 l~h-t~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 453 LAH-TEEDIDFTIAAAERVLARI 474 (474)
T ss_pred CCC-CHHHHHHHHHHHHHHHHhC
Confidence 555 9999999999999998764
No 270
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.75 E-value=5.8e-16 Score=153.73 Aligned_cols=325 Identities=15% Similarity=0.114 Sum_probs=192.7
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCC------CCCcccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY------LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y------~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
.+.|+|-..++ .+++.+++++...+......+| .....+.++.....+.....++.. .-+ +|
T Consensus 49 ~~~l~LiasEN-------~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~--~an---vq 116 (493)
T PRK13580 49 RSSLKLIASEN-------YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAE--HAY---VQ 116 (493)
T ss_pred hcCceEecccc-------cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCC--ccc---cc
Confidence 46788887765 2378899988877644322222 223344444433333333333321 123 34
Q ss_pred cccchhHHHHHHHHHHHhCC-------------------------------CCEEEEcCCCCcchHHH-----hhhCCCC
Q 012628 157 GLSGTGSLRLAAALIERYFP-------------------------------GAKVLISSPTWGNHKNI-----FNDARVP 200 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~-------------------------------gd~Vlv~~p~y~~~~~~-----~~~~G~~ 200 (459)
..+|+.|+..+ +.+.+.| ||+|+..++..++|... +.....+
T Consensus 117 p~Sg~~An~~v--~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~ 194 (493)
T PRK13580 117 PHSGADANLVA--FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFH 194 (493)
T ss_pred CCCcHHHHHHH--HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheee
Confidence 58888888887 4555655 89999998776555221 1122256
Q ss_pred eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012628 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (459)
Q Consensus 201 v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~ 280 (459)
++.++++ ++++.+|++++++.+++ .+..++++..+|=.+ . .++++|.++|+++|+++++|+++..-..+.
T Consensus 195 ~~~y~vd-~~~g~iD~d~l~~~~~~---~~plvii~g~S~~~~-~---~dl~~i~eia~~~gA~L~VD~AH~~Gligg-- 264 (493)
T PRK13580 195 QRSYGVD-PDTGLLDYDEIAALARE---FKPLILVAGYSAYPR-R---VNFAKLREIADEVGAVLMVDMAHFAGLVAG-- 264 (493)
T ss_pred eEecccC-cccCccCHHHHHHHHhh---cCCEEEEeCccccCC-C---cCHHHHHHHHHHcCCEEEEECchhhceecc--
Confidence 6677774 44678999999999987 444555566666644 5 468889999999999999999954322221
Q ss_pred CChhHHHHHHhcCCeEEEEEcCCcCc-ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCC--chHHHHHHH-HHh
Q 012628 281 NDASSVRLFATRGMELLVAQSYSKNL-GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNP--PVHGARIVA-NVV 356 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~L 356 (459)
+... ..+-.....+++++|++|++ |+. -|++++ +++..+.+ .......++++ +.+++.+++ ..+
T Consensus 265 -~~~~-~~~~~~~~~D~vtgT~hKaL~GP~---GG~I~~---~~~l~~~L----~~a~P~i~gg~l~p~iAA~avAl~e~ 332 (493)
T PRK13580 265 -KVFT-GDEDPVPHADIVTTTTHKTLRGPR---GGLVLA---KKEYADAV----DKGCPLVLGGPLPHVMAAKAVALAEA 332 (493)
T ss_pred -ccch-hhcCCCCCCcEEEeCChhhccCCC---eEEEEe---cHHHHHHH----hhCCCcccCCCccHHHHHHHHHHHHH
Confidence 1100 00001123568899999988 533 377755 67744444 22112223332 322222221 111
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc--CCcceeeecCC-----CHHHHHHHHhcccEEEc
Q 012628 357 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL--RQIGMFSFTGL-----NKAQSDNMTNKWHVYMT 429 (459)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~--~~~g~f~~~~l-----~~~~~~~ll~~~gI~v~ 429 (459)
.+++ .++.++++.++.++|.+.|. +.| +.++. .+..+ +++.+ +...+.+.|++.||.+.
T Consensus 333 ~~~e--------f~~y~~~l~~Na~~La~~L~-~~G----~~vv~ggTdshI-V~V~lg~~~~~g~~a~~~L~e~GI~vn 398 (493)
T PRK13580 333 RTPE--------FQKYAQQVVDNARALAEGFL-KRG----ARLVTGGTDNHL-VLIDVTSFGLTGRQAESALLDAGIVTN 398 (493)
T ss_pred hCcc--------HHHHHHHHHHHHHHHHHHHH-hcC----CCccCCCCCCCE-EEEEeCCHHHHHHHHHHHHHHCCeEEc
Confidence 1111 24567888889999999999 888 45432 23333 33332 22356666666799886
Q ss_pred C--------C-----C-cEEEcc-----CChhhHHHHHHHHHHHHhh
Q 012628 430 K--------D-----G-RISLAG-----LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 430 ~--------g-----g-Ris~~~-----~~~e~i~~~~~~l~~~~~~ 457 (459)
+ + | ||+... .++++|+++++.|.++++.
T Consensus 399 ~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 399 RNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred cccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 3 1 2 777543 3579999999999988763
No 271
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.1e-15 Score=137.35 Aligned_cols=311 Identities=14% Similarity=0.102 Sum_probs=195.3
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC-CCCEEE
Q 012628 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGAKVL 181 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~-~gd~Vl 181 (459)
..+++++|.++...+ .-|+......+|.+.+|+.+.+. ..++ ..+||.++.++ +...+. +|.+||
T Consensus 35 TdeMr~am~eA~vgD--dVyGeD~tt~rLE~~vA~l~GKE-------AgLF---v~SGTmgNlla--Im~Hc~~rg~eii 100 (384)
T KOG1368|consen 35 TDEMRRAMAEASVGD--DVYGEDPTTNRLEQRVAELFGKE-------AGLF---VPSGTMGNLLA--IMVHCHQRGSEII 100 (384)
T ss_pred hHHHHHHHhhcccCc--ccccCCccHHHHHHHHHHHhCcc-------ceee---ecccccccHHH--HHHHhcCCCceEE
Confidence 688888888876543 34555556679999999996442 3343 47778888887 455566 999999
Q ss_pred EcCCCCc-chHH--HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc-----CCCCcEEEEeCCCCCCCC-CCCCHHHHH
Q 012628 182 ISSPTWG-NHKN--IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA-----APGGSFILLHGCAHNPTG-IDPTPEQWE 252 (459)
Q Consensus 182 v~~p~y~-~~~~--~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~-----~~~~~~~ii~~~p~NPTG-~~~s~~~l~ 252 (459)
+.+-++- .|+. +....|+.++++.- ++++.+|++++++++.. +.+.++++.+.|-||-+| .++|.+++.
T Consensus 101 ~gd~~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~ 178 (384)
T KOG1368|consen 101 VGDRAHIHRYEQGGISQLAGVHVRTVKN--ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELD 178 (384)
T ss_pred eccchheeehhccChhhhccceeEeeee--CCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHH
Confidence 9886652 2322 23345555555544 67889999999999984 235788998888888776 999999999
Q ss_pred HHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHH
Q 012628 253 KIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ 332 (459)
Q Consensus 253 ~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~ 332 (459)
+|.++|++||+.+..|.+-..-..- ....++..+....+-+- -=|||.+|.| +|-+ +++++..+++-..
T Consensus 179 ~v~~lak~~glkLH~DGARi~NAav---asgV~vk~i~~~fDSVs--iCLSKglgAP---VGSV--iVG~k~FI~kA~~- 247 (384)
T KOG1368|consen 179 RVKALAKRHGLKLHMDGARIFNAAV---ASGVPVKKICSAFDSVS--ICLSKGLGAP---VGSV--IVGSKDFIDKARH- 247 (384)
T ss_pred HHHHHHhccCCeeecchhhhhhHHH---HcCCCHHHHHHhhhhhh--hhhhccCCCC---cccE--EEccHHHHHHHHH-
Confidence 9999999999999999983321110 01113333333322222 2479999876 8998 5688886555332
Q ss_pred HHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC-Ccceeee--
Q 012628 333 LKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGMFSF-- 409 (459)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-~~g~f~~-- 409 (459)
+++...+.+ --+.+.++++...|++. | ..++...++ ...|.+.++ ..+ .+.+..+ ....+++
T Consensus 248 ~RKalGGGm-RQsGvLaaaaLval~~~-----~-~~L~~dHk~----A~~lAe~~~-~~~---~i~v~v~a~etNiv~~~ 312 (384)
T KOG1368|consen 248 FRKALGGGM-RQSGVLAAAALVALDEN-----V-PLLRADHKR----AKELAEYIN-TPE---EIRVEVPAVETNIVNMV 312 (384)
T ss_pred HHHHhcCch-hHHHHHHHHHHHHhhcc-----h-HHHHHHHHH----HHHHHHHhc-ccc---ceeeecchhhcceeeee
Confidence 233222222 22233333333333321 1 123344443 344445555 443 1333333 2233444
Q ss_pred ---cCCCHHHHHHHHhcccEEEcCCC----cEEEcc-CChhhHHHHHHHHHHHH
Q 012628 410 ---TGLNKAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY 455 (459)
Q Consensus 410 ---~~l~~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~e~i~~~~~~l~~~~ 455 (459)
.+++.+.+..-++++||.+..+. ||.+.. .++++++++...+.+.+
T Consensus 313 l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 313 LCQARLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred cccccCCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 36677776666667899998875 788765 48999999999995443
No 272
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.74 E-value=3.6e-16 Score=154.85 Aligned_cols=305 Identities=13% Similarity=0.049 Sum_probs=187.2
Q ss_pred CcHH-HHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc-cchhHHHHHHHHHHHhCC-CC
Q 012628 102 VLDV-VKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL-SGTGSLRLAAALIERYFP-GA 178 (459)
Q Consensus 102 ~~~~-v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~-ggt~a~~l~~~~~~~~~~-gd 178 (459)
++|. |++++.............-..-+.+.|+.++++++... +.+|++ +. +||++++.++ .+.+.+ ++
T Consensus 23 ~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~-----~~~v~~--~~gs~T~~~~~~~--~~l~~~~~~ 93 (378)
T PRK03080 23 KRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPE-----GYEVGI--VPGSDTGAWEMAL--WSLLGARRV 93 (378)
T ss_pred CChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCC-----CceEEE--ECCchHHHHHHHH--HhcCCCCcc
Confidence 4666 99998765432100111113445788888888876421 356887 65 8999999983 444554 44
Q ss_pred EEEEcCCCCcc-hHH-HhhhCCC-CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012628 179 KVLISSPTWGN-HKN-IFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (459)
Q Consensus 179 ~Vlv~~p~y~~-~~~-~~~~~G~-~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~ 255 (459)
.|++ .-.|+. +.. ..+..|+ +++.++. +++..+|+++++ . ++++.+++.+|.||.. .++++|+
T Consensus 94 ~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~--~~g~~~d~~~i~----~----~~~V~~~h~~t~tG~~---~pi~~I~ 159 (378)
T PRK03080 94 DHLA-WESFGSKWATDVVKQLKLEDPRVLEA--DYGSLPDLSAVD----F----DRDVVFTWNGTTTGVR---VPVARWI 159 (378)
T ss_pred eEEE-eCHHHHHHHHHHHhhcCCCCceEecc--CCCCCCCHhhcC----C----CCCEEEEecCCcccee---ccchhhc
Confidence 5544 334432 333 2356798 9998887 345677877632 2 2346678899999999 4566777
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc-cCCCCcceEEEEeCChhHHHHHHHHH-
Q 012628 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQL- 333 (459)
Q Consensus 256 ~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~- 333 (459)
+ +++|+++++|.+ |.++..+.+. +. .++++.|..|.++ ++| +|++++ +++.++++....
T Consensus 160 ~--~~~g~~~vVDa~-qs~G~~pidv---------~~--iD~~~~s~~K~l~~P~G--~g~l~v---~~~~~~~~~p~~~ 220 (378)
T PRK03080 160 G--ADREGLTICDAT-SAAFALPLDW---------SK--LDVYTFSWQKVLGGEGG--HGMAIL---SPRAVERLESYTP 220 (378)
T ss_pred c--ccCCCeEEEecc-cccccCCCCH---------HH--CcEEEEehhhhCCCCCc--eEEEEE---CHHHHHhhhcccC
Confidence 7 789999999999 7777543321 11 3688889999985 477 788877 777665543210
Q ss_pred -----------------HhhccccccC-CchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCCC
Q 012628 334 -----------------KRLARPMYSN-PPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSG 394 (459)
Q Consensus 334 -----------------~~~~~~~~~~-~~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~ 394 (459)
.......+.+ ++..+..++...|+ +.. +. .++++.++.+++.+++++.|+ +++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~---~l~--~~gG~e~i~~r~~~l~~~l~~~l~-~~~~- 293 (378)
T PRK03080 221 ARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLD---WAN--SIGGLDALIARTAANASVLYDWAE-KTPW- 293 (378)
T ss_pred CCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHH---HHH--HcCCHHHHHHHHHHHHHHHHHHHH-hCCC-
Confidence 0000011112 33333222222221 111 12 357888999999999999998 8752
Q ss_pred CCccccc--C--Cc-ceeee--cC----CCHHHHHHHHhcccEEEcCC------C--cEEEccC-ChhhHHHHHHHHHHH
Q 012628 395 KDWSFIL--R--QI-GMFSF--TG----LNKAQSDNMTNKWHVYMTKD------G--RISLAGL-SLAKCEYLADAIIDS 454 (459)
Q Consensus 395 ~~~~~~~--~--~~-g~f~~--~~----l~~~~~~~ll~~~gI~v~~g------g--Ris~~~~-~~e~i~~~~~~l~~~ 454 (459)
+.... + .. +...+ .+ .+.+++.+++++ ||.+..| + |||+... ++++++.++++|+++
T Consensus 294 --~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~ 370 (378)
T PRK03080 294 --ATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWA 370 (378)
T ss_pred --cccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHH
Confidence 23321 1 12 33433 22 234456677765 7777543 2 9998766 889999999999998
Q ss_pred Hhhc
Q 012628 455 YHNV 458 (459)
Q Consensus 455 ~~~~ 458 (459)
++++
T Consensus 371 ~~~~ 374 (378)
T PRK03080 371 FERL 374 (378)
T ss_pred HHHH
Confidence 8765
No 273
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=1.2e-15 Score=152.60 Aligned_cols=157 Identities=21% Similarity=0.183 Sum_probs=123.5
Q ss_pred cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----hhhCCCCe
Q 012628 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVPW 201 (459)
Q Consensus 126 ~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~G~~v 201 (459)
.-..+|++.+|++.... ..++ |++|++|++++ +...+.+||+|+++...|...... +...|+++
T Consensus 64 p~~~~le~~lA~l~g~~--------~av~--~sSGt~Al~~a--l~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v 131 (433)
T PRK08134 64 PTVAVLEERVAALEGGV--------GAIA--TASGQAALHLA--IATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIET 131 (433)
T ss_pred hHHHHHHHHHHHHhCCC--------cEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEE
Confidence 34688999999996542 3566 89999999998 444578999999999999765443 35589999
Q ss_pred eeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012628 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (459)
Q Consensus 202 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~ 281 (459)
+.++.+ |++++++++++ ++++|++.+|+||||.+ .++++|+++|+++|+++|+|.++......
T Consensus 132 ~~vd~~-------d~~~l~~~i~~---~TklV~~e~~~np~g~v---~Di~~I~~la~~~gi~livD~t~a~~~~~---- 194 (433)
T PRK08134 132 TFVKPG-------DIDGWRAAIRP---NTRLLFGETLGNPGLEV---LDIPTVAAIAHEAGVPLLVDSTFTTPYLL---- 194 (433)
T ss_pred EEECCC-------CHHHHHHhcCC---CCeEEEEECCCcccCcc---cCHHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 888762 78999999986 78889999999999999 67888999999999999999995432211
Q ss_pred ChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
. .+ ..+.++++.|.+|.++.+|-.+|.+++
T Consensus 195 ~--pl-----~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 195 R--PF-----EHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred C--ch-----hcCCCEEEeccccccCCCCCceEEEEE
Confidence 0 11 224578899999999988888888754
No 274
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.73 E-value=5.9e-17 Score=141.72 Aligned_cols=167 Identities=22% Similarity=0.147 Sum_probs=125.2
Q ss_pred cHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH-HHhhhCCCCeeeeee
Q 012628 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK-NIFNDARVPWSEYRY 206 (459)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~-~~~~~~G~~v~~v~~ 206 (459)
+.++++.++++++. ..+++++ +.|+++++.++... ...+|++|+++.++|+++. ..++..|++++.++.
T Consensus 2 ~~~~~~~l~~~~~~------~~~~~~~--~~~~t~a~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~ 71 (170)
T cd01494 2 LEELEEKLARLLQP------GNDKAVF--VPSGTGANEAALLA--LLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPV 71 (170)
T ss_pred HHHHHHHHHHHcCC------CCCcEEE--eCCcHHHHHHHHHH--hCCCCCEEEEeecccceehhhHHHhcCCEEEEecc
Confidence 36889999999741 2567888 88999999998433 3457999999999999888 788899999999998
Q ss_pred ecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012628 207 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (459)
Q Consensus 207 ~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~ 286 (459)
++......+++.+++.... +++.++++++++||+|...+. ++|.++|+++|+++|+|++|..+......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~------ 140 (170)
T cd01494 72 DDAGYGGLDVAILEELKAK--PNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG------ 140 (170)
T ss_pred CCCCccchhhhhhhhcccc--CceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc------
Confidence 5333233333355444332 477888899999999999654 77888999999999999999887754210
Q ss_pred HHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 287 RLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
......+.++++.|++|.++. .|+|++++
T Consensus 141 -~~~~~~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 141 -VLIPEGGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred -cccccccCCEEEEEcccccCC--CceEEEEe
Confidence 011223467888999999985 56899854
No 275
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.73 E-value=2.2e-15 Score=147.15 Aligned_cols=305 Identities=15% Similarity=0.054 Sum_probs=191.3
Q ss_pred cHHHHHHHHHHhhc---CCCCCCCCC-------cccHHHHHHHHHHHhcCCCCccccCceEEeeccc-chhHHHHHHHHH
Q 012628 103 LDVVKKAENLMLER---GENKEYLPI-------EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS-GTGSLRLAAALI 171 (459)
Q Consensus 103 ~~~v~~a~~~~~~~---~~~~~Y~~~-------~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g-gt~a~~l~~~~~ 171 (459)
|..|++++.+.+.. .....|... .-+.+.|+.+++++... +..+|++ +.| ||++++.+ +.
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-----~~~~v~~--~~gsgT~a~ea~--~~ 74 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-----DNYEVLF--LQGGATGQFAAV--PL 74 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-----CCceEEE--EcCCchHHHHHH--HH
Confidence 67788888887752 111122111 23345566666665431 1245777 666 99999998 55
Q ss_pred HHhCCCCEEEEcCCCCcc--hHHHhhhCCCCeeeeeeec--CCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCC
Q 012628 172 ERYFPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYD--PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT 247 (459)
Q Consensus 172 ~~~~~gd~Vlv~~p~y~~--~~~~~~~~G~~v~~v~~~~--~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s 247 (459)
+.+.+||++++..-+..+ +..+++..|+ ++.+...+ +++..+|++.++. + ++++++.++...|.||+..+
T Consensus 75 nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~v~~th~ETstGv~~~ 148 (349)
T TIGR01364 75 NLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S---EDAAYVHYCANETIHGVEFR 148 (349)
T ss_pred hcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C---CCCCEEEEcCCCCcccEecc
Confidence 556789998888877654 4567778898 77776531 2334567776552 2 25677888888999999754
Q ss_pred HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHH
Q 012628 248 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAA 327 (459)
Q Consensus 248 ~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~ 327 (459)
++++.+++++++|.+ +.++..+.+. +..+ +++.|..|.+|++| +|++++ +++.++
T Consensus 149 --------~l~~~~~~l~iVDav-ss~g~~~id~---------~~~d--~~~~ssqK~lgP~G--lg~l~~---s~~~~~ 203 (349)
T TIGR01364 149 --------ELPDVKNAPLVADMS-SNILSRPIDV---------SKFG--LIYAGAQKNIGPAG--LTVVIV---RKDLLG 203 (349)
T ss_pred --------eecccCCCeEEEEcc-ccccCccCCH---------HHcc--EEEEecccccCCCc--eEEEEE---CHHHHh
Confidence 556678999999999 7777543321 2222 88889999999998 788877 777665
Q ss_pred HHHHH------HHh-h-ccccccCCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccC-CCCCc
Q 012628 328 RVKSQ------LKR-L-ARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK-SGKDW 397 (459)
Q Consensus 328 ~~~~~------~~~-~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~ 397 (459)
++... ... . ....+.+|+.....+....|+ +.. .+ .++++.++++++.+++++.|+ +++ +-
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~---~l~--~~gG~e~i~~r~~~l~~~l~~~l~-~~~gl~--- 274 (349)
T TIGR01364 204 RASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFK---WLK--EQGGVKAIEKRNQAKAQLLYDTID-NSNGFY--- 274 (349)
T ss_pred hcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHH---HHH--HcCCHHHHHHHHHHHHHHHHHHHH-hCCCee---
Confidence 54221 010 0 011122444444444333332 110 22 378999999999999999999 884 31
Q ss_pred cccc-C--Cc-ceeeec--CC--CHHHHHHHHhcccEEEcCC----C--cEEEccC-ChhhHHHHHHHHHHHHhh
Q 012628 398 SFIL-R--QI-GMFSFT--GL--NKAQSDNMTNKWHVYMTKD----G--RISLAGL-SLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 398 ~~~~-~--~~-g~f~~~--~l--~~~~~~~ll~~~gI~v~~g----g--Ris~~~~-~~e~i~~~~~~l~~~~~~ 457 (459)
.... + .. ....+. +. ..++...+ .++|+.+.+| | |+|+... ++|||+.++++|+++.++
T Consensus 275 ~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~-~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 275 RNPVDPRNRSRMNVVFTLGNEELEKRFLKEA-EERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ccCCCHHHcCCeEEEEecCChhHhHHHHHHH-HHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 1111 1 12 223222 22 23333444 4469977666 3 9998765 889999999999998764
No 276
>PRK06541 hypothetical protein; Provisional
Probab=99.73 E-value=5e-15 Score=149.58 Aligned_cols=343 Identities=12% Similarity=0.071 Sum_probs=197.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC---CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE---NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...||+..|..-...++. +|.|.+++.+.+++.. ...| ......++.+.+++..... -+.+.+ ++
T Consensus 51 G~~ylD~~~g~~~~~lGh~--~p~v~~Av~~q~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~~------~~~v~f--~~ 119 (460)
T PRK06541 51 GKRYLDGLAGLFVVQVGHG--RAELAEAAAKQAGTLAFFPLWSY-AHPPAIELAERLAALAPGD------LNRVFF--TT 119 (460)
T ss_pred CCEEEECCccHHhccCCCC--CHHHHHHHHHHHhhCcCcccccc-CCHHHHHHHHHHHHhCCCC------cCEEEE--cC
Confidence 4578898887542233443 7889999988886421 0122 2222334444444442111 257888 99
Q ss_pred cchhHHHHHHHHHHHhC------CCCEEEEcCCCCcchHHHhh-hCC------------CCeeeeeeecCCC---CCCC-
Q 012628 159 SGTGSLRLAAALIERYF------PGAKVLISSPTWGNHKNIFN-DAR------------VPWSEYRYYDPKT---VGLD- 215 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~------~gd~Vlv~~p~y~~~~~~~~-~~G------------~~v~~v~~~~~~~---~~~d- 215 (459)
+|++|++.+.++..... ...+|+...-+|.+...... ..| ..+..+|...... ++-+
T Consensus 120 sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 199 (460)
T PRK06541 120 GGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDP 199 (460)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCH
Confidence 99999999988876652 13688888888876533222 111 1122333211000 1112
Q ss_pred -------HHHHHHHHHcC-CCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012628 216 -------FEGMIADIKAA-PGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (459)
Q Consensus 216 -------~e~l~~~i~~~-~~~~~~ii~~~p~NPTG~~~s-~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~ 286 (459)
++.+++.+... ++...++++...++++|.+.+ ++.+++|.++|++||+++|+||++.+++-.+ ..+..
T Consensus 200 ~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G---~~~a~ 276 (460)
T PRK06541 200 EAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLG---EMFGC 276 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---hhhhh
Confidence 35677777632 234556665556999998765 8889999999999999999999988885321 12222
Q ss_pred HHHHhcCCeEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHHhh-ccccccCCchHHHHHHHHHhCChhhHHH
Q 012628 287 RLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIVANVVGNPALFDE 364 (459)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 364 (459)
.. .+-.++++ +|+|.++ .|+ ++|++++ +++..+.+....... ...++ +.+.++..++...|+ ..
T Consensus 277 ~~-~gv~PDiv---t~gK~l~-~G~~pigav~~---~~~i~~~~~~~~~~~~~~~T~-~gnp~~~aaala~l~---~l-- 342 (460)
T PRK06541 277 ER-FGYVPDII---TCAKGIT-SGYSPLGAMIA---SDRLFEPFLDGPTMFLHGYTF-GGHPVSAAVALANLD---IF-- 342 (460)
T ss_pred hh-cCCCCCEE---Eeccccc-CCccceeEEEE---cHHHHHHhhcCCCccccCCCC-CCCHHHHHHHHHHHH---HH--
Confidence 11 12224443 5899999 887 9999976 777444432211111 11222 233333333333322 10
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeeec--C-------CC---------HHHHHHHHhccc
Q 012628 365 WKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFT--G-------LN---------KAQSDNMTNKWH 425 (459)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~~--~-------l~---------~~~~~~ll~~~g 425 (459)
. -+...++.+++.++|.+.|+ ++. .|. +..+...|.++.+- . ++ ..+...+++ +|
T Consensus 343 -~--~~~~~~~~~~~g~~l~~~L~-~l~~~~~-v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G 416 (460)
T PRK06541 343 -E--REGLLDHVRDNEPAFRATLE-KLLDLPI-VGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFE-AG 416 (460)
T ss_pred -H--hccHHHHHHHHHHHHHHHHH-HhhcCCC-eEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHh-CC
Confidence 0 02345777788888888887 652 110 12233454444321 1 00 012345555 69
Q ss_pred EEEcCC--C----cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 426 VYMTKD--G----RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 426 I~v~~g--g----Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
|.+.+. | ||+..- .+++++++++++|.++++++
T Consensus 417 i~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 417 LYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred eEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999763 3 677552 38999999999999998753
No 277
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.72 E-value=6.4e-15 Score=147.41 Aligned_cols=340 Identities=13% Similarity=0.075 Sum_probs=190.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...||+..|......|.. +|.|.+++.+.++......+ +.....+|-+.+.+.+.. ..+.+.+ +++|+
T Consensus 52 G~~yiD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~L~~~~~~------~~~~v~f--~~SGs 120 (433)
T PRK00615 52 GKTFIDFCGSWGSLIHGHS--HPKICDAIQQGAERGTSYGL-TSEQEILFAEELFSYLGL------EDHKIRF--VSSGT 120 (433)
T ss_pred CCEEEEcccchhccccCCC--CHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhCCC------CcCEEEE--eCchH
Confidence 4578898877542233443 78999999888865432222 333344555555555321 1257888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----hhhCCCC---e-eee--eeecCC--C-CCCCHHHHHHHHHcCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVP---W-SEY--RYYDPK--T-VGLDFEGMIADIKAAPG 228 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~G~~---v-~~v--~~~~~~--~-~~~d~e~l~~~i~~~~~ 228 (459)
+|++.+.++.+.+....+|+...-+|.++... ....+-. . ... +..... . .--|++.+++.+....+
T Consensus 121 EA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 200 (433)
T PRK00615 121 EATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGH 200 (433)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCC
Confidence 99999988876665557888888888775311 1111100 0 000 000000 0 01268888888865444
Q ss_pred CcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 229 GSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
+..++|+.....-.|... +++-+++|.++|++||+++|+||++.++..+ ..... ...+..++++ +|+|.+|
T Consensus 201 ~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G----~~ga~-~~~gv~PDi~---~~gK~lg 272 (433)
T PRK00615 201 RVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVA----QGGAA-AIYHVKPDIT---VYGKILG 272 (433)
T ss_pred ceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccccc----HhHHH-HhcCCCCCeE---EEccccc
Confidence 556666666565567654 5777999999999999999999998776332 11122 2222234443 4899998
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHH---HhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN---VVGNPALFDEWKAEMEMMAGRIKNVRQKLF 384 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (459)
.|+.+|++++ +++..+.+..........++ +.+.++..++.. .++++++ +++.++.-+..++.|.
T Consensus 273 -gG~p~~av~~---~~~i~~~~~~~~~~~~~~T~-~g~p~~~aa~la~L~~i~~~~~-------~~~~~~~g~~l~~~l~ 340 (433)
T PRK00615 273 -GGLPAAAVVA---HKSIMDHLAPEGTIFQAGTL-SGNPLAMAAGKASINLCREQGF-------YTQLSTLEQNFLSPIE 340 (433)
T ss_pred -CCcceeeeee---cHHHHhhhcCCCCcccCCCC-cccHHHHHHHHHHHHHHhcccH-------HHHHHHHHHHHHHHHH
Confidence 6788888765 77744443211011111222 223333333322 3333222 1222222222233334
Q ss_pred HHHhhccCCCCCcccccCCcceeee--cCC-----------CH----HHHHHHHhcccEEEcCCC--c--EEEccCChhh
Q 012628 385 DSLSAKDKSGKDWSFILRQIGMFSF--TGL-----------NK----AQSDNMTNKWHVYMTKDG--R--ISLAGLSLAK 443 (459)
Q Consensus 385 ~~L~~~~g~~~~~~~~~~~~g~f~~--~~l-----------~~----~~~~~ll~~~gI~v~~gg--R--is~~~~~~e~ 443 (459)
+.+. +.|+| +.... .|.++.+ ..- +. .+...+++ +||++.+.+ . +|... ++++
T Consensus 341 ~~~~-~~g~~--v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~ls~~h-t~~d 414 (433)
T PRK00615 341 EMIR-SQGFP--VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS-KGVYLSPSPFEASFLSSAH-SMEN 414 (433)
T ss_pred HHHH-HcCCC--eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH-CCeeecCccccccceecCC-CHHH
Confidence 4444 44432 22222 3333321 110 11 23456666 599998874 3 67766 9999
Q ss_pred HHHHHHHHHHHHhhc
Q 012628 444 CEYLADAIIDSYHNV 458 (459)
Q Consensus 444 i~~~~~~l~~~~~~~ 458 (459)
|+++++++.++++++
T Consensus 415 id~~~~a~~~~~~~~ 429 (433)
T PRK00615 415 LDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999864
No 278
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=4.5e-15 Score=148.35 Aligned_cols=164 Identities=17% Similarity=0.090 Sum_probs=120.7
Q ss_pred CCCCC--CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH----H
Q 012628 120 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN----I 193 (459)
Q Consensus 120 ~~Y~~--~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~----~ 193 (459)
+.|+. ..-...|++.++++... +..++ +++|+.|+..+ +.+.+.+||+|+++...|..... .
T Consensus 61 ~~Ysr~~~p~~~~Le~~lA~l~g~--------~~av~--~sSG~aAi~~a--l~all~~Gd~Vv~~~~~y~~t~~~~~~~ 128 (436)
T PRK07812 61 NIYTRIMNPTQDVVEQRIAALEGG--------VAALL--LASGQAAETFA--ILNLAGAGDHIVSSPRLYGGTYNLFHYT 128 (436)
T ss_pred ccccCCCCchHHHHHHHHHHHhCC--------CeEEE--EccHHHHHHHH--HHHHhCCCCEEEEeCCcchHHHHHHHHH
Confidence 34553 33456888999988543 23455 68889999887 55667899999999988876543 3
Q ss_pred hhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC
Q 012628 194 FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG 273 (459)
Q Consensus 194 ~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~ 273 (459)
+...|++++.++ + . .|++.+++++++ ++++|++.+|+||+|.+ .++++|+++|+++|+++|+|+++..
T Consensus 129 l~~~Gi~v~~vd-d-~----~d~e~l~~ai~~---~tklV~ie~~sNp~G~v---~Dl~~I~~la~~~gi~liVD~t~a~ 196 (436)
T PRK07812 129 LPKLGIEVSFVE-D-P----DDLDAWRAAVRP---NTKAFFAETISNPQIDV---LDIPGVAEVAHEAGVPLIVDNTIAT 196 (436)
T ss_pred hhcCeEEEEEEC-C-C----CCHHHHHHhCCC---CCeEEEEECCCCCCCee---cCHHHHHHHHHHcCCEEEEECCCcc
Confidence 345787777774 1 1 289999998875 78899999999999999 6788899999999999999999543
Q ss_pred CCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 274 FASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
.... . .+ ..+.++++.|++|.+|..|--+|++++
T Consensus 197 ~~~~----~--pl-----~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 197 PYLI----R--PL-----EHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred cccC----C--ch-----hcCCCEEEEecccccCCCCCeEEEEEE
Confidence 2110 0 11 123457779999999888777888754
No 279
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.72 E-value=7.5e-15 Score=144.16 Aligned_cols=301 Identities=14% Similarity=0.100 Sum_probs=186.4
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCc-chHHHhhhCC
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWG-NHKNIFNDAR 198 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~-~~~~~~~~~G 198 (459)
..|.....+.+|.+.+++++.. +.++. +++||.|++++ +...+.|||.| +..+|. .....+...|
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~--------e~aV~--v~sGTaAl~ll--~~l~v~pGd~V--p~n~~f~Tt~ahI~~~G 137 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGF--------KHVVP--THQGRGAENLL--SRIAIKPGQYV--PGNMYFTTTRYHQELNG 137 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCC--------CeEEE--eCCHHHHHHHH--HHhCCCCcCEE--CCccchHhhHHHHHhCC
Confidence 4588788889999999999743 45777 89999999986 33346799965 444443 3334367788
Q ss_pred CCeeeeeee--------cCCCCCCCHHHHHHHHHcC-CCCcEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012628 199 VPWSEYRYY--------DPKTVGLDFEGMIADIKAA-PGGSFILLHGCAHNPT-GIDPTPEQWEKIADVIQEKNHIPFFD 268 (459)
Q Consensus 199 ~~v~~v~~~--------~~~~~~~d~e~l~~~i~~~-~~~~~~ii~~~p~NPT-G~~~s~~~l~~i~~l~~~~~~~ii~D 268 (459)
+..+.+..+ .+.++.+|++.++++|++. ++++.++.+.+++|-. |...|.+++++|.++|++||+.+|+|
T Consensus 138 a~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 138 GIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred cEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 855544311 2446889999999999863 2233344445578888 78999999999999999999999999
Q ss_pred ccCCCCC-----------CCCCCCChhHHHHHHhc--CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHh
Q 012628 269 VAYQGFA-----------SGSLDNDASSVRLFATR--GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR 335 (459)
Q Consensus 269 eay~~~~-----------~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~ 335 (459)
.+. .+. +.+ .++...+.+ .--+.++.|++|.++.+ +|.++ +++++++.+++......
T Consensus 218 aAr-a~gna~fI~~re~~y~~-----~~i~ei~~e~~s~aD~~t~S~~K~~~~~---~GG~i-~t~D~eL~~~~r~~~~~ 287 (460)
T PRK13237 218 ATR-CVENAYFIKEREEGYQD-----KSIKEIVHEMFSYADGCTMSGKKDCLVN---IGGFL-AMNDEELFDEAKELVVV 287 (460)
T ss_pred Ccc-hhcChhhhcccccccCC-----CcHhHHhhhccCcCcEEEEeCCCCCCCC---CceEE-EECCHHHHHHHHHhccc
Confidence 994 333 211 122111110 11356777899998754 44443 47788855555443211
Q ss_pred hcc-ccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecC---
Q 012628 336 LAR-PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG--- 411 (459)
Q Consensus 336 ~~~-~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~--- 411 (459)
.-. .++.+.+.--..+.+.-|.+ |.++ .+.+.--...++|.+.|. +.| +.++.|.||--+|++
T Consensus 288 ~eG~~tygg~~grd~~alAvgl~E------~~~~--~y~~~ri~~~~~l~~~L~-~~G----vpv~~p~ggH~v~vda~~ 354 (460)
T PRK13237 288 YEGMPSYGGMAGRDMEAMAIGIEE------SVQY--EYIEHRVGQVRYLGEKLL-AAG----VPIVEPVGGHAVFLDARR 354 (460)
T ss_pred cCCCcCCCChhhhHHHHHHhHHHh------hchH--HHHHHHHHHHHHHHHHHH-HCC----CceecCCCceEEEEEhHH
Confidence 101 11112211111122211211 1111 222223335678888898 888 467778888666653
Q ss_pred ----C------CHHHHHHHHhcccEEEcCC-----------C----------cEEEcc--CChhhHHHHHHHHHHHHhh
Q 012628 412 ----L------NKAQSDNMTNKWHVYMTKD-----------G----------RISLAG--LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 412 ----l------~~~~~~~ll~~~gI~v~~g-----------g----------Ris~~~--~~~e~i~~~~~~l~~~~~~ 457 (459)
+ ...++..|..+.||--..- | |+++.- +|.+++++++++|.++.++
T Consensus 355 ~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 355 FLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred hCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 2 1244556777778744321 1 777652 4889999999999998765
No 280
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.71 E-value=2.6e-15 Score=148.10 Aligned_cols=193 Identities=21% Similarity=0.166 Sum_probs=132.7
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEE
Q 012628 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv 182 (459)
..+..+++.+.++.+....+ ..-..+|.+.+++++.. ++++. +++||.|+.++...+ .+.+||+|++
T Consensus 4 ~~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~g~--------~~~~~--~~sgt~Al~~al~~l-~~~~gdeVi~ 70 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYFGV--------KYAVA--VSSGTSALHLALRAL-GLGPGDEVIV 70 (363)
T ss_dssp HHHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHHHHT-TGGTTSEEEE
T ss_pred CHHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHhCC--------CeEEE--eCChhHHHHHHHHhc-CCCcCceEec
Confidence 45667777787776542222 44578999999999753 56777 899999999984432 2459999999
Q ss_pred cCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 012628 183 SSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN 262 (459)
Q Consensus 183 ~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~ 262 (459)
+.-+|......+..+|++++.++++ ++++.+|++.+++.+++ ++++|++ .+.-|.. .++++|.++|+++|
T Consensus 71 p~~t~~~~~~ai~~~G~~pv~~Di~-~~~~~id~~~~~~~i~~---~t~ai~~---~h~~G~~---~d~~~i~~~~~~~~ 140 (363)
T PF01041_consen 71 PAYTFPATASAILWAGAEPVFVDID-PETLNIDPEALEKAITP---KTKAILV---VHLFGNP---ADMDAIRAIARKHG 140 (363)
T ss_dssp ESSS-THHHHHHHHTT-EEEEE-BE-TTTSSB-HHHHHHHHHT---TEEEEEE---E-GGGB------HHHHHHHHHHTT
T ss_pred CCCcchHHHHHHHHhccEEEEEecc-CCcCCcCHHHHHHHhcc---CccEEEE---ecCCCCc---ccHHHHHHHHHHcC
Confidence 9999999999999999999999996 56899999999999997 6777774 3455666 78999999999999
Q ss_pred CeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcC--CcCcccCCCCcceEEEEeCChhHHHHHHH
Q 012628 263 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY--SKNLGLYAERIGAMNVVCSSSDLAARVKS 331 (459)
Q Consensus 263 ~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~~~v~~~~~~~~~~~~ 331 (459)
++||+|.+ +.++.. . +... +... .++.+.|| +|.+. .|. =|++ ++.++++.+++..
T Consensus 141 i~lIeD~a-~a~g~~-~--~g~~----~G~~-gd~~~fSf~~~K~i~-~ge-GG~v--~~~~~~~~~~~~~ 198 (363)
T PF01041_consen 141 IPLIEDAA-QAFGAR-Y--KGRP----VGSF-GDIAIFSFHPTKIIT-TGE-GGAV--VTNDPELAERARA 198 (363)
T ss_dssp -EEEEE-T-TTTT-E-E--TTEE----TTSS-SSEEEEESSTTSSS--SSS--EEE--EESTHHHHHHHHH
T ss_pred CcEEEccc-cccCce-e--CCEe----ccCC-CCceEecCCCCCCCc-CCC-CeeE--EecHHHHHHHhhh
Confidence 99999999 555421 0 0000 1111 24666676 69886 554 2555 5778886665554
No 281
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=1.9e-14 Score=144.85 Aligned_cols=339 Identities=12% Similarity=0.044 Sum_probs=193.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCC---CCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|+..|..-...|+. +|.|.+++.+.+++.... .| +.....+|.+.+++..... ..+.+.+ ++
T Consensus 53 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~-~~~~~~~lAe~L~~~~p~~-----~~~~v~f--~~ 122 (441)
T PRK05769 53 GNVYLDFNAGIAVTNVGHA--HPKVVKAVKEQAEKFLHYSLTDF-YYEPAVELAERLVEIAPGG-----FEKKVFF--TN 122 (441)
T ss_pred CCEEEECCCchhhcccCCC--CHHHHHHHHHHHHhccCccCccc-CCHHHHHHHHHHHHhCCCC-----CCCEEEE--CC
Confidence 3578898888643333443 688999998888643111 12 1222334444444442110 0257888 99
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-CCC-------------CeeeeeeecCCCC--C-C-------
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-ARV-------------PWSEYRYYDPKTV--G-L------- 214 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~~--~-~------- 214 (459)
+|++|++.+.++.......++|+...-+|.+....... .|. .+..+|..+.... . -
T Consensus 123 SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (441)
T PRK05769 123 SGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGN 202 (441)
T ss_pred chHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHH
Confidence 99999999988877665557899988888766432221 111 1223333110000 0 0
Q ss_pred -CHHHHHHHH-Hc--CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH
Q 012628 215 -DFEGMIADI-KA--APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF 289 (459)
Q Consensus 215 -d~e~l~~~i-~~--~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~ 289 (459)
+++.+++.+ +. .++...++++-......|.. .+++.+++|.++|++||+++|+||++.+++..+ ..+....+
T Consensus 203 ~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G---~~~a~~~~ 279 (441)
T PRK05769 203 AVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTG---KMFAIEHF 279 (441)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---ceehhhcc
Confidence 123355523 21 13456666666666667765 567779999999999999999999998776432 11122121
Q ss_pred HhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012628 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 369 (459)
Q Consensus 290 ~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~ 369 (459)
...++++ +|||.++ .|+++|++++ +++. ..........++ +.+.+++.++...|+ .. + .
T Consensus 280 -gv~pDiv---t~~K~l~-~G~p~gav~~---~~~i----~~~~~~~~~~T~-~g~p~~~aaa~a~L~---~l---~-~- 338 (441)
T PRK05769 280 -GVEPDII---TLAKAIA-GGLPLGAVIG---RAEL----MFLPPGSHANTF-GGNPVAAAAALATLE---EL---E-E- 338 (441)
T ss_pred -CCCCCEE---EEccccc-CCcccEEEEE---ehhh----hhcCCCCCCCCC-CcCHHHHHHHHHHHH---HH---H-H-
Confidence 2223444 5899999 7999999866 6663 222222223333 334555555544442 11 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhccC--CCCCcccccCCcceee--ecCC----C----HHHHHHHHhcccEEEcCCC----c
Q 012628 370 EMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFS--FTGL----N----KAQSDNMTNKWHVYMTKDG----R 433 (459)
Q Consensus 370 ~~~~~~~~~~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~--~~~l----~----~~~~~~ll~~~gI~v~~gg----R 433 (459)
...++.+++-++|.+.|+ ++. .|- +..+...|.++. +.+- + ..+.+.+++ +||.+.+.| |
T Consensus 339 -~~~~~~~~~g~~l~~~L~-~l~~~~~~-~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~Gil~~~~~~~~lr 414 (441)
T PRK05769 339 -GLLENAQKLGEYLRKELK-ELKEKYEF-IGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFK-RGLLLLGAGKSAIR 414 (441)
T ss_pred -HHHHHHHHHHHHHHHHHH-HHHHhCCC-eeeeecceEEEEEEeccCCccccHHHHHHHHHHHHh-CCcEEecCCCCEEE
Confidence 345566666667777666 542 110 111222232221 1111 1 123445555 699998765 6
Q ss_pred EEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 434 ISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 434 is~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
++... .++++|+++++++.+++.++
T Consensus 415 ~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 415 IIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 66443 38999999999999998764
No 282
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.71 E-value=3.1e-15 Score=146.73 Aligned_cols=312 Identities=13% Similarity=0.046 Sum_probs=193.9
Q ss_pred CCccCcHHHHHHHHHHhhcC--------CCCCCCC--CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHH
Q 012628 98 LQPYVLDVVKKAENLMLERG--------ENKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLA 167 (459)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~--------~~~~Y~~--~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~ 167 (459)
++..+|+.|++++.+.+.+- ......+ ..-+.+.++.++++++... ..++++ .+.+|+++++.+
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~-----~~~v~~-~~gsgt~~~Ea~ 83 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPD-----NYKVLF-LQGGASLQFAMV 83 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCC-----CcEEEE-EcCCchHHHHHH
Confidence 44556899999998876210 0011212 1344677777777765310 234544 157788999998
Q ss_pred HHHHHHhCCCCEEEEcCCCCcch--HHHhhhCCCCeeeeeeecCCCCCCCHHHHHH-HHHcCCCCcEEEEeCCCCCCCCC
Q 012628 168 AALIERYFPGAKVLISSPTWGNH--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIA-DIKAAPGGSFILLHGCAHNPTGI 244 (459)
Q Consensus 168 ~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~-~i~~~~~~~~~ii~~~p~NPTG~ 244 (459)
+.+.+.+||++++..-+..++ ..+++.+|.. ..++..+.+ ...+..++++ .+++ +++++.++...|.||+
T Consensus 84 --~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~-g~~~~~~~~~~~l~~---~~~~V~~th~eTstGv 156 (360)
T PRK05355 84 --PMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDD-GFTYIPPLDEWQLSD---DAAYVHYTSNETIDGT 156 (360)
T ss_pred --HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEeccccc-CCCCCCChhhccCCC---CCCEEEEccCCCcceE
Confidence 677788999988887766543 5577788864 555553212 3344444444 5654 5667878888999999
Q ss_pred CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChh
Q 012628 245 DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (459)
Q Consensus 245 ~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~ 324 (459)
..+ ++++| +|+++++|.+ +.++..+.+ ++..+ +++.|..|.+|++| +|++++ +++
T Consensus 157 ~~~--~i~~i------~g~l~vVDav-ss~g~~~id---------v~~~d--~~~~ssqK~lgP~G--lg~l~~---s~~ 211 (360)
T PRK05355 157 EFH--ELPDT------GDVPLVADMS-SDILSRPID---------VSKFG--LIYAGAQKNIGPAG--LTIVIV---RED 211 (360)
T ss_pred ecC--ccccc------CCCcEEEEcC-ccccCccCC---------HHHcc--EEEEeccccccCCc--eEEEEE---CHH
Confidence 964 45555 8999999999 777754332 12222 88889999999888 788877 777
Q ss_pred HHHHHHHHH------Hh-hc-cccccCCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012628 325 LAARVKSQL------KR-LA-RPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDKSGK 395 (459)
Q Consensus 325 ~~~~~~~~~------~~-~~-~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 395 (459)
.++++.... .. .. .....+++.....+....|+ +.. .+ .++++.++++++.+++++.|+ ++|+
T Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~---~i~--~~gG~e~i~~r~~~l~~~l~~~l~-~~~~-- 283 (360)
T PRK05355 212 LLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFK---WLK--EQGGVAAMEKRNQEKAALLYDAID-SSDF-- 283 (360)
T ss_pred HHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHH---HHH--HccCHHHHHHHHHHHHHHHHHHHH-hCCC--
Confidence 655532210 00 11 11223444544444433332 110 22 368899999999999999999 8873
Q ss_pred CcccccC---Cc-ceeeec--CC-C-HHHHHHHHhcccEEEcCC----C--cEEEccC-ChhhHHHHHHHHHHHHhh
Q 012628 396 DWSFILR---QI-GMFSFT--GL-N-KAQSDNMTNKWHVYMTKD----G--RISLAGL-SLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 396 ~~~~~~~---~~-g~f~~~--~l-~-~~~~~~ll~~~gI~v~~g----g--Ris~~~~-~~e~i~~~~~~l~~~~~~ 457 (459)
+....+ .. ....+. +. . .++...+.+ +|+.+.++ | |+|+... +.|||++++++|++++++
T Consensus 284 -~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~-~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 284 -YRNPVAPEDRSRMNVPFTLADEELDKKFLAEAKA-AGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred -cccCCChhhcCCcEEEEEcCChHHHHHHHHHHHH-CCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 222111 11 223332 21 2 233344444 69988555 3 9998766 789999999999998764
No 283
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.70 E-value=3.1e-14 Score=143.10 Aligned_cols=336 Identities=15% Similarity=0.082 Sum_probs=193.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...+|+..|..-..-++. .|.|.+++.+.++......+ +.....++.+.+++.... .+.+.+ +++|+
T Consensus 52 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~-~~~~~~~la~~l~~~~p~-------~~~v~f--~~sGs 119 (428)
T PRK12389 52 GNKYIDYLAAYGPIITGHA--HPHITKAITEAAENGVLYGT-PTELEIEFAKMLKEAIPS-------LEKVRF--VNSGT 119 (428)
T ss_pred CCEEEEccccccccccCCC--CHHHHHHHHHHHHhCCccCC-CCHHHHHHHHHHHHhCCC-------CcEEEE--eCCHH
Confidence 4578888877542233443 68899999888865432222 333334555555554311 357888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-hCCCCee--------eeee-ecCCC---CCCCHHHHHHHHHcCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARVPWS--------EYRY-YDPKT---VGLDFEGMIADIKAAPG 228 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~G~~v~--------~v~~-~~~~~---~~~d~e~l~~~i~~~~~ 228 (459)
+|++.+.++.+.+....+|+...-+|.+...... ..|.... .++. ..++. .-.|++.+++.+...++
T Consensus 120 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 199 (428)
T PRK12389 120 EAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGD 199 (428)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCC
Confidence 9999998887776655789998988877543222 2221100 0000 00000 01278889888875444
Q ss_pred CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 229 GSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
....+++.....-.|.+ .+++.+++|.++|++||+++|.||+..++..+. .... ...+..++++ +++|.++
T Consensus 200 ~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~----~~a~-~~~gv~PDiv---t~gK~lg 271 (428)
T PRK12389 200 EVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMY----GGAQ-DLLGVEPDLT---ALGKIIG 271 (428)
T ss_pred cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCc----chhh-HHhCCCCCee---eechhhc
Confidence 56666666667777865 467789999999999999999999988774320 1111 1223334543 7899998
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAGRIKNVRQKLF 384 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (459)
.|+.+|.+++ +++..+.+...-......++ +.+.++..++. ..+++++ ..++.+++-++|.
T Consensus 272 -gG~Pi~av~~---~~~i~~~~~~~~~~~~~~T~-~gnpl~~Aaala~L~~l~~~~-----------l~~~~~~~g~~l~ 335 (428)
T PRK12389 272 -GGLPIGAYGG---RKDIMEQVAPLGPAYQAGTM-AGNPASMAAGIACLEVLQQEG-----------VYEKLDRLGAMLE 335 (428)
T ss_pred -CCCceeEEeE---HHHHHhhhccCCCcccccCC-ccCHHHHHHHHHHHHHHhccc-----------HHHHHHHHHHHHH
Confidence 7899999865 77744443210001122233 23333333332 2333322 3344444555555
Q ss_pred HHHhh---ccCCCCCcccccCCcceeee--cC--C---------C----HHHHHHHHhcccEEEcCCC----cEEEccCC
Q 012628 385 DSLSA---KDKSGKDWSFILRQIGMFSF--TG--L---------N----KAQSDNMTNKWHVYMTKDG----RISLAGLS 440 (459)
Q Consensus 385 ~~L~~---~~g~~~~~~~~~~~~g~f~~--~~--l---------~----~~~~~~ll~~~gI~v~~gg----Ris~~~~~ 440 (459)
+.|++ +++.. ..+. ..+|++.. .. . + ..+...+++ +||.+.+.+ .+++.. +
T Consensus 336 ~~L~~l~~~~~~~--~~v~-r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~~~l~~-t 410 (428)
T PRK12389 336 EGILEAAEKHGIT--ITIN-RLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLN-QGINLAPSKYEAWFLTTAH-T 410 (428)
T ss_pred HHHHHHHHhCCCC--EEEE-ecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHH-CCcEeecCCCCCeeecCCC-C
Confidence 55540 23311 1111 22334321 11 0 1 123445555 699998865 344444 9
Q ss_pred hhhHHHHHHHHHHHHhhc
Q 012628 441 LAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 441 ~e~i~~~~~~l~~~~~~~ 458 (459)
+++++++++++.++++++
T Consensus 411 ~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 411 EEDIEETLEAVDRAFAQL 428 (428)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999999998763
No 284
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=2.1e-14 Score=143.66 Aligned_cols=158 Identities=17% Similarity=0.125 Sum_probs=118.4
Q ss_pred cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHhhhCCCCe
Q 012628 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVPW 201 (459)
Q Consensus 126 ~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~G~~v 201 (459)
.-...+++.++++... +..|++ .+|+.|+.++ +.+.+.+||+|+++...|.... ..++..|+++
T Consensus 69 pt~~~le~~la~l~g~-------~~~v~f---sSG~~Ai~~a--l~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v 136 (437)
T PRK05613 69 PTVEALENRIASLEGG-------VHAVAF---ASGQAAETAA--ILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEV 136 (437)
T ss_pred hHHHHHHHHHHHHhCC-------CeEEEe---CCHHHHHHHH--HHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEE
Confidence 3457888889888643 244554 6666888876 4555789999999998988663 3456789999
Q ss_pred eeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012628 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (459)
Q Consensus 202 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~ 281 (459)
+.++. . .|++.+++++++ +++++++.++.||+|.+ .++++|+++|+++|+++|+|.++.. ... .
T Consensus 137 ~~vd~--~----~d~e~l~~~l~~---~tk~V~~e~~~Np~~~v---~di~~I~~la~~~gi~livD~t~a~-g~~-~-- 200 (437)
T PRK05613 137 TFVEN--P----DDPESWQAAVQP---NTKAFFGETFANPQADV---LDIPAVAEVAHRNQVPLIVDNTIAT-AAL-V-- 200 (437)
T ss_pred EEECC--C----CCHHHHHHhCCc---cCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCeEEEECCCcc-ccc-c--
Confidence 98872 2 278999999886 67778888999999988 7788999999999999999999533 211 0
Q ss_pred ChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEE
Q 012628 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNV 318 (459)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 318 (459)
. .+ ..+.++++.|++|.++.+|.-+|.+++
T Consensus 201 ~--p~-----~~GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 201 R--PL-----ELGADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred C--hH-----HhCCCEEEeeccceecCCCcceeEEEE
Confidence 0 11 123578999999999877777788754
No 285
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.69 E-value=4.8e-15 Score=158.95 Aligned_cols=289 Identities=11% Similarity=0.010 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHhcCCCCccccCceEEeecccch----hHHHHHHHHHHHhCC-CC----EEEEcCCCCcchHHHhhhCCC
Q 012628 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGT----GSLRLAAALIERYFP-GA----KVLISSPTWGNHKNIFNDARV 199 (459)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt----~a~~l~~~~~~~~~~-gd----~Vlv~~p~y~~~~~~~~~~G~ 199 (459)
.++|+.++++++ .++|.+ +.+++ .+++++++.+ +.+ || +|+++...+......+...|+
T Consensus 571 ~~~r~~la~i~g--------~~~v~f--~pnaga~ge~a~~~vi~~~--~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~ 638 (993)
T PLN02414 571 EDLGDLLCEITG--------FDSFSL--QPNAGAAGEYAGLMVIRAY--HLSRGDHHRNVCIIPVSAHGTNPASAAMCGM 638 (993)
T ss_pred HHHHHHHHHHhC--------CCeEEE--cCCCcHHHHHHHHHHHHHH--HhccCCCCCCEEEeCCCcCccCHHHHHHCCC
Confidence 477777777753 277888 88777 7888874433 554 88 899999998888888888999
Q ss_pred CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCC
Q 012628 200 PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 200 ~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~ 279 (459)
+++.+|.+ +++.+|+++|++.+++..++++++++++|+|-+|.. +++++|+++|+++|+++++|.+ +..+....
T Consensus 639 ~vv~v~~d--~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgA-q~~a~~~l 712 (993)
T PLN02414 639 KIVVVGTD--AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGA-NMNAQVGL 712 (993)
T ss_pred EEEEeccC--CCCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEec-CHHhccCc
Confidence 99999984 467899999999998644478899999999999999 8899999999999999999999 43332111
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcc----cCCCCcceEEEEeCChhHHHHHHHHHH-h----hc--cccccCC---c
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAMNVVCSSSDLAARVKSQLK-R----LA--RPMYSNP---P 345 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~RiG~~~~v~~~~~~~~~~~~~~~-~----~~--~~~~~~~---~ 345 (459)
. . ....+-+++++|.+|.|+ ..|-.+|++.+ .+.+...+..... . .. ...+.+. .
T Consensus 713 ~--~------p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~---~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a 781 (993)
T PLN02414 713 T--S------PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAA 781 (993)
T ss_pred C--C------ccccCCCEEEecCCccCCcCcccCCCCeeeEEE---chhhcccCCCCccccCCCcccccCCCCcCCccch
Confidence 0 0 123456788999999664 22344888865 5553222221110 0 00 0001111 1
Q ss_pred hH----HHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCcccccCCccee---e--ec-----
Q 012628 346 VH----GARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAK-DKSGKDWSFILRQIGMF---S--FT----- 410 (459)
Q Consensus 346 ~~----~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~g~~~~~~~~~~~~g~f---~--~~----- 410 (459)
.. ...++..++..-+ .+.+++..++...+.+++.+.|. + ++ +.+..+.+.+| + +.
T Consensus 782 ~~g~al~l~~A~~yi~~lG-----~~Gl~~~a~~a~~nAnYl~~rL~-~~~~----~~~~~~~~~~~hEfv~~~~~l~~~ 851 (993)
T PLN02414 782 PWGSALILPISYTYIAMMG-----SEGLTDASKIAILNANYMAKRLE-GHYP----VLFRGKNGTCAHEFIIDLRPFKNT 851 (993)
T ss_pred hhhhHHHHHHHHHHHHHHC-----HhHHHHHHHHHHHHHHHHHHHHH-hhCC----ccccCCCCCeeeeEEEeccccccc
Confidence 11 1112222221101 24577888888889999999998 5 22 23333333221 1 11
Q ss_pred -CCC-HHHHHHHHhcccEEEc----CC--C-cEEEccC-ChhhHHHHHHHHHHHHhh
Q 012628 411 -GLN-KAQSDNMTNKWHVYMT----KD--G-RISLAGL-SLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 411 -~l~-~~~~~~ll~~~gI~v~----~g--g-Ris~~~~-~~e~i~~~~~~l~~~~~~ 457 (459)
+.+ .+..++|++ +||... |. . ||+.+-. +++|+|++++++..+..+
T Consensus 852 ~g~~~~di~krL~d-~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 852 AGIEPEDVAKRLMD-YGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred cCCCHHHHHHHHHH-cCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 133 455778874 688642 22 2 8887654 889999999999887765
No 286
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.69 E-value=2.2e-14 Score=145.01 Aligned_cols=325 Identities=15% Similarity=0.132 Sum_probs=187.0
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCC------CCcccHHHHHH----HHHHHhcCCCCccccCce
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKV----TAELLFGADNSVLKEQRV 152 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~a----ia~~l~~~~~~~~~~~~i 152 (459)
.+.|+|-..++ .+++.+++++...+.+....+|+ -.....++.+. .++.+... ...+
T Consensus 34 ~~~l~liasen-------~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~------~~~~ 100 (475)
T PLN03226 34 WKGLELIASEN-------FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLD------PEKW 100 (475)
T ss_pred HcCeeEecCCc-------cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCC------ccee
Confidence 46788887765 23788999998887332222322 22233444331 22222222 3334
Q ss_pred -EEeecccchhHHHHHHHHHHHhCCCCEEEEcCC---CCcchHHHhhh---CCCCee----eeeeecCCCCCCCHHHHHH
Q 012628 153 -ATVQGLSGTGSLRLAAALIERYFPGAKVLISSP---TWGNHKNIFND---ARVPWS----EYRYYDPKTVGLDFEGMIA 221 (459)
Q Consensus 153 -~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p---~y~~~~~~~~~---~G~~v~----~v~~~~~~~~~~d~e~l~~ 221 (459)
+-+|..+|+.++..+ +.+.+.|||+|+..+. +|..+...... .+.... +++++ .+++.+|++++++
T Consensus 101 ~~nv~~~SG~~AN~av--~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~-~~~g~iD~d~Le~ 177 (475)
T PLN03226 101 GVNVQPLSGSPANFAV--YTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLD-ESTGLIDYDKLEK 177 (475)
T ss_pred EEecCcCchHHHHHHH--HHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeec-CCCCCcCHHHHHH
Confidence 335567888888877 5666889999999553 44444333221 112111 33443 4567899999999
Q ss_pred HHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEc
Q 012628 222 DIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS 301 (459)
Q Consensus 222 ~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 301 (459)
.+... +++++++ ..++ +|.. .++++|.++|+++|.++++|+++. ++.-..+..... . ...+++++|
T Consensus 178 ~l~~~--~pklIv~-~~S~-~s~~---~D~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~~p----~--~~~Div~~t 243 (475)
T PLN03226 178 KAMLF--RPKLIIA-GASA-YPRD---WDYARMRKIADKVGALLMCDMAHI-SGLVAAQEAASP----F--EYCDVVTTT 243 (475)
T ss_pred HHhhc--CCeEEEE-ecCc-CCCc---cCHHHHHHHHHHcCCEEEEEchhh-hCcccCCCCCCC----C--CCCeEEEec
Confidence 98753 4455554 2333 6666 567789999999999999999943 332111110000 1 135688999
Q ss_pred CCcCc-ccCCCCcceEEEEeCChhHHH----------HHHHHHHhhccccccCCchHHHHHH-HH---HhCChhhHHHHH
Q 012628 302 YSKNL-GLYAERIGAMNVVCSSSDLAA----------RVKSQLKRLARPMYSNPPVHGARIV-AN---VVGNPALFDEWK 366 (459)
Q Consensus 302 ~SK~~-~~~G~RiG~~~~v~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~L~~~~~~~~~~ 366 (459)
++|++ |+.| |++++ +++..+ .+.+.........+.+.+...+.++ .. .+.+.
T Consensus 244 ~hK~L~GP~G---g~I~~---~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~------- 310 (475)
T PLN03226 244 THKSLRGPRG---GMIFF---RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTP------- 310 (475)
T ss_pred CcccccCCCc---eEEEE---chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCc-------
Confidence 99998 6555 67644 443221 1111111111111222222222222 22 22222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC--Ccceeee----cCCCHHHHHHHHhcccEEEcCC---------
Q 012628 367 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR--QIGMFSF----TGLNKAQSDNMTNKWHVYMTKD--------- 431 (459)
Q Consensus 367 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~--~~g~f~~----~~l~~~~~~~ll~~~gI~v~~g--------- 431 (459)
..++++++..++.++|.+.|. +.| ++++.+ +..+.++ .+++...++..|++.||.+..+
T Consensus 311 -~~~~~~~~~~~na~~L~~~L~-~~G----~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~ 384 (475)
T PLN03226 311 -EFKAYQKQVKANAAALANRLM-SKG----YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSAL 384 (475)
T ss_pred -CHHHHHHHHHHHHHHHHHHHH-hCC----CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccC
Confidence 235678888999999999999 777 455542 2222221 2456777888888889987542
Q ss_pred ---C-cE-----EEccCChhhHHHHHHHHHHHHh
Q 012628 432 ---G-RI-----SLAGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 432 ---g-Ri-----s~~~~~~e~i~~~~~~l~~~~~ 456 (459)
| |+ +-.+.++++++++.+.|.++++
T Consensus 385 ~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 385 VPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 3 54 3334588999999999999887
No 287
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.69 E-value=2.2e-14 Score=144.62 Aligned_cols=340 Identities=15% Similarity=0.077 Sum_probs=192.7
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+|+..|.-...-++. +|.|.+++.+.++... ...|.+.....+|.+.+++..... .+.+.+ +++|
T Consensus 81 G~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~SG 150 (459)
T PRK11522 81 GQEFIDCLGGFGIFNVGHR--NPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGK------LKYSFF--CNSG 150 (459)
T ss_pred CCEEEECCcCHHhhhcCCC--CHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCCc
Confidence 3567888777432223443 7889999988876421 122333333344555555543211 257888 9999
Q ss_pred hhHHHHHHHHHHHhCC--C-CEEEEcCCCCcchHHHhh-hCCCCeee---eeeecC--CCCCCCHHHHHHHHHc---CCC
Q 012628 161 TGSLRLAAALIERYFP--G-AKVLISSPTWGNHKNIFN-DARVPWSE---YRYYDP--KTVGLDFEGMIADIKA---APG 228 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~--g-d~Vlv~~p~y~~~~~~~~-~~G~~v~~---v~~~~~--~~~~~d~e~l~~~i~~---~~~ 228 (459)
++|++.+.++.+.+.. | .+|+....+|.+...... ..|-.... .|..+. .-...|.+.+++.++. .++
T Consensus 151 sEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 230 (459)
T PRK11522 151 TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGD 230 (459)
T ss_pred hHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCC
Confidence 9999999888776653 3 478888888876543222 22211100 111000 0001267778877753 223
Q ss_pred CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 229 GSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
+...+|+.....-.|.+ .+++.++++.++|++||+++|+||+..+++-.+ ..+.... .+..++++ +++|.+|
T Consensus 231 ~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~-~gv~PDiv---t~gK~lg 303 (459)
T PRK11522 231 DVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG---KMFACEH-ENVQPDIL---CLAKALG 303 (459)
T ss_pred cEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc---hhhhhhc-cCCCCCEE---Eechhhh
Confidence 45566666666666775 567779999999999999999999987765321 2223222 12234443 7899998
Q ss_pred cCC-CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAGRIKNVRQKL 383 (459)
Q Consensus 308 ~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (459)
.| +.+|.+++ .++..+.+... ......++ +.+.++..++. ..++++ ...++.+++-++|
T Consensus 304 -gG~~Pigav~~---~~~i~~~~~~~-~~~~~~T~-~gnp~~~Aaala~L~~i~~~-----------~l~~~~~~~g~~l 366 (459)
T PRK11522 304 -GGVMPIGATIA---TEEVFSVLFDN-PFLHTTTF-GGNPLACAAALATINVLLEQ-----------NLPAQAEQKGDYL 366 (459)
T ss_pred -CCCccceeEEE---cHHHHHHhccC-CcccCCCC-CCCHHHHHHHHHHHHHHhcc-----------hHHHHHHHHHHHH
Confidence 67 58999866 66644433211 11112223 22333333332 233322 3345666666667
Q ss_pred HHHHhhccC--CCCCcccccCCcceeeecCC--C---HHHHHHHHhcccEEEcCC---C---cEEEcc-CChhhHHHHHH
Q 012628 384 FDSLSAKDK--SGKDWSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKD---G---RISLAG-LSLAKCEYLAD 449 (459)
Q Consensus 384 ~~~L~~~~g--~~~~~~~~~~~~g~f~~~~l--~---~~~~~~ll~~~gI~v~~g---g---Ris~~~-~~~e~i~~~~~ 449 (459)
.+.|+ ++. .|..+..+... |.++-+.+ + ..+.+.+++ +||.+.+. + ||..+. .++++++++++
T Consensus 367 ~~~L~-~l~~~~~~~i~~VrG~-Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~ 443 (459)
T PRK11522 367 LDGFR-QLAREYPDLVQEARGK-GMLMAIEFVDNEIGYNFASEMFR-QRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLK 443 (459)
T ss_pred HHHHH-HHHHhCCCceeeEEec-eeEEEEEecCchHHHHHHHHHHH-CCeEEEecCCCCCEEEEECCccCCHHHHHHHHH
Confidence 76666 542 11101112223 33322222 1 234556666 69999764 2 665543 39999999999
Q ss_pred HHHHHHhhc
Q 012628 450 AIIDSYHNV 458 (459)
Q Consensus 450 ~l~~~~~~~ 458 (459)
+|.++++++
T Consensus 444 ~l~~~l~~~ 452 (459)
T PRK11522 444 AARKALAAM 452 (459)
T ss_pred HHHHHHHHH
Confidence 999998764
No 288
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.69 E-value=2.7e-14 Score=143.07 Aligned_cols=330 Identities=13% Similarity=0.058 Sum_probs=189.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC-CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+|+..|.-...-++. +|.|.+++.+.++.. ....|.......++.+.+++..... .+.+.+ +++|
T Consensus 74 G~~ylD~~~g~~~~~lGh~--hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~SG 143 (442)
T TIGR03372 74 GNEFIDCLGGFGIFNVGHR--NPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGK------LKYSFF--CNSG 143 (442)
T ss_pred CCEEEECCccHHhhhcCCC--CHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eCCc
Confidence 4567888777332222443 788999998877542 1123333434445555555543211 256888 9999
Q ss_pred hhHHHHHHHHHHHhC---CCCEEEEcCCCCcchHHHhhhC-CC------------CeeeeeeecCCCCCCCHHHHHHHHH
Q 012628 161 TGSLRLAAALIERYF---PGAKVLISSPTWGNHKNIFNDA-RV------------PWSEYRYYDPKTVGLDFEGMIADIK 224 (459)
Q Consensus 161 t~a~~l~~~~~~~~~---~gd~Vlv~~p~y~~~~~~~~~~-G~------------~v~~v~~~~~~~~~~d~e~l~~~i~ 224 (459)
++|++.+.++.+... ...+|+..+.+|.+........ |- .+..+|. .|.+.+++.++
T Consensus 144 sEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-------~d~~~~~~~l~ 216 (442)
T TIGR03372 144 TESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-------GDIEAMLKALN 216 (442)
T ss_pred hHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------CCHHHHHHHHH
Confidence 999999988877663 3467999998887654322211 11 1122222 25677777775
Q ss_pred c---CCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEE
Q 012628 225 A---APGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQ 300 (459)
Q Consensus 225 ~---~~~~~~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (459)
. .+.+...+|+......-|... +++-++++.++|++||+++|.||++.+++-.+ ..+....+ +-.++++
T Consensus 217 ~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~a~e~~-gv~PDiv--- 289 (442)
T TIGR03372 217 ECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG---KMFACEHE-GVQPDIL--- 289 (442)
T ss_pred HHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc---cchhhhhc-CCCCCee---
Confidence 3 234566666666666667654 67779999999999999999999987765321 22333222 2234444
Q ss_pred cCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHH---hCChhhHHHHHHHHHHHHHHH
Q 012628 301 SYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEMEMMAGRI 376 (459)
Q Consensus 301 S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---L~~~~~~~~~~~~~~~~~~~~ 376 (459)
+++|.+| .| +.+|.+++ +++..+.+... ......++ +.+.++..++... +++. ...++.
T Consensus 290 t~gK~lg-~G~~Pigavv~---~~~i~~~~~~~-~~~~~~T~-~gnp~~~Aaa~a~L~~i~~~-----------~l~~~~ 352 (442)
T TIGR03372 290 CLAKALG-GGVMPIGATIA---TEAVFSVLFDN-PFLHTTTF-GGNPLACAAALATINELLEK-----------NLPAQA 352 (442)
T ss_pred eehhhhc-CCcccceEEEe---cHHHHHhhhcc-CccccCCC-CCCHHHHHHHHHHHHHHHhc-----------cHHHHH
Confidence 4899998 78 68999865 66744443211 00112223 2233333333333 3222 223444
Q ss_pred HHHHHHHHHHHhhccC--CCCCcccccCCcceeeecCC--C---HHHHHHHHhcccEEEcCC---C---cEEEcc-CChh
Q 012628 377 KNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGL--N---KAQSDNMTNKWHVYMTKD---G---RISLAG-LSLA 442 (459)
Q Consensus 377 ~~~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~~~~l--~---~~~~~~ll~~~gI~v~~g---g---Ris~~~-~~~e 442 (459)
++.-+++.+.|+ ++. .|..+.-+... |.++-+.+ + ..+.+.+++ +||.+.+. + ||..+- .+++
T Consensus 353 ~~~G~~l~~~L~-~l~~~~~~~i~~vRG~-Gl~~giel~~~~~~~~i~~~l~~-~Gvl~~~~~~~~~~lr~~Ppl~~t~~ 429 (442)
T TIGR03372 353 AIKGDFLLDGFQ-QLAAEYPDLIIEARGK-GLLMAIEFRDNEIGYAFAKELFQ-QNILVAGTLNNAKSIRIEPPLTITIE 429 (442)
T ss_pred HHHHHHHHHHHH-HHHHhCCCceEEEecc-eEEEEEEeCChHHHHHHHHHHHH-CCcEEeecCCCCCEEEEECCcccCHH
Confidence 555555655555 431 11111122233 33333322 1 234556666 59998653 2 666442 3899
Q ss_pred hHHHHHHHHHHHH
Q 012628 443 KCEYLADAIIDSY 455 (459)
Q Consensus 443 ~i~~~~~~l~~~~ 455 (459)
+++++++++.+++
T Consensus 430 ~id~~~~~l~~~~ 442 (442)
T TIGR03372 430 QCALVIKAAKDAL 442 (442)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998764
No 289
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.68 E-value=3.9e-14 Score=139.20 Aligned_cols=213 Identities=11% Similarity=0.041 Sum_probs=144.9
Q ss_pred cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh----hhCCCCe
Q 012628 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF----NDARVPW 201 (459)
Q Consensus 126 ~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~----~~~G~~v 201 (459)
.-...|.+.+|++-.+ +..++ +++|+.|+..+ +++.+.+||+|+++...|.+....+ +..|+++
T Consensus 62 Pt~~~le~~la~LEg~--------~~a~~--~~SGmaAi~~~--~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v 129 (395)
T PRK08114 62 LTHFSLQEAMCELEGG--------AGCAL--YPCGAAAVANA--ILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTT 129 (395)
T ss_pred hhHHHHHHHHHHHhCC--------CeEEE--EhHHHHHHHHH--HHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEE
Confidence 3456788888887322 34555 78899999988 5566889999999999987666544 5679888
Q ss_pred eeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CCeeEEeccCCCCCCCCC
Q 012628 202 SEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK--NHIPFFDVAYQGFASGSL 279 (459)
Q Consensus 202 ~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~--~~~ii~Deay~~~~~~~~ 279 (459)
..++. .|.+.+++++++ +++++++.+|.||||.+ .++++|+++|+++ |+++++|.++..-.. +
T Consensus 130 ~~vd~-------~d~~~l~~~l~~---~TrlV~~EtpsNp~~~v---~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~--~ 194 (395)
T PRK08114 130 TWFDP-------LIGADIAKLIQP---NTKVVFLESPGSITMEV---HDVPAIVAAVRSVNPDAVIMIDNTWAAGVL--F 194 (395)
T ss_pred EEECC-------CCHHHHHHhcCC---CceEEEEECCCCCCCEe---ecHHHHHHHHHHhCCCCEEEEECCCccccc--c
Confidence 88764 367889999876 78999999999999999 7888999999998 499999999654221 1
Q ss_pred CCChhHHHHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCC
Q 012628 280 DNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGN 358 (459)
Q Consensus 280 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 358 (459)
+ . ...+-++++.|.+|.++-+| .-.|.+ +.+++..+.+..... ......+...+..+..-|+
T Consensus 195 ~----p-----l~~GaDivv~S~tKyl~Ghsdv~~G~v---~~~~~~~~~l~~~~~----~~G~~~~p~~a~l~~rgl~- 257 (395)
T PRK08114 195 K----A-----LDFGIDISIQAGTKYLVGHSDAMIGTA---VANARCWEQLRENSY----LMGQMVDADTAYMTSRGLR- 257 (395)
T ss_pred C----H-----HHcCCcEEEEcCcccccCCCcceeEEE---EcCHHHHHHHHHHHH----hccCCCCHHHHHHHHcCCC-
Confidence 1 1 12346799999999876565 445543 335654444332211 1111333333333322222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
.+.-+.++..++...+.+.|+ +.+
T Consensus 258 ---------TL~lR~~~~~~na~~va~~L~-~hp 281 (395)
T PRK08114 258 ---------TLGVRLRQHEESSLKVAEWLA-EHP 281 (395)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 244556677777788888887 653
No 290
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.68 E-value=1.8e-14 Score=141.62 Aligned_cols=310 Identities=11% Similarity=0.031 Sum_probs=184.7
Q ss_pred CCccCcHHHHHHHHHHhhcCC-CCCCCC--CcccHHHHHHHHHHHhcCCCCccccCceEEeec-ccchhHHHHHHHHHHH
Q 012628 98 LQPYVLDVVKKAENLMLERGE-NKEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG-LSGTGSLRLAAALIER 173 (459)
Q Consensus 98 ~~~~~~~~v~~a~~~~~~~~~-~~~Y~~--~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t-~ggt~a~~l~~~~~~~ 173 (459)
|+..+++.|++++......-. ...+.+ ..-+.+.|+.++++++... +.+|++ + .+||.+++.+ +.+.
T Consensus 10 GP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~-----~~~v~f--~~gs~T~a~~~~--~~~l 80 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPD-----GYEVIL--GNGGATAFWDAA--TFGL 80 (361)
T ss_pred CCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCC-----CceEEE--ECCchhHHHHHH--HHhc
Confidence 445578999999875310000 012222 3456788999999976421 346776 6 5599999998 4433
Q ss_pred hCCCCEEEEcCCCCc-chHHHhhhC--CCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH
Q 012628 174 YFPGAKVLISSPTWG-NHKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ 250 (459)
Q Consensus 174 ~~~gd~Vlv~~p~y~-~~~~~~~~~--G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~ 250 (459)
+.+ +..++..-.|. .+...++.+ +.++..++.. ++..++.+ +. ++++++.+++.+|.||...+
T Consensus 81 ~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~-----~~---~~~~lV~~~h~et~tG~~~p--- 146 (361)
T TIGR01366 81 IEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTAD--PGSAPEPQ-----AD---PGVDVIAWAHNETSTGVAVP--- 146 (361)
T ss_pred ccc-cccEEecCHHHHHHHHHHHhhhccCCceEEecC--CCCCCCCc-----cC---CCCCEEEEcccCCccceecc---
Confidence 432 33334343443 344444442 3377777763 23334431 22 37888989999999999955
Q ss_pred HHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHH
Q 012628 251 WEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK 330 (459)
Q Consensus 251 l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~ 330 (459)
+++| ++++|+++++|.+ +.++....+. +. .++++.|..|.+|++|- ++.+++ +++.++++.
T Consensus 147 i~~I---~~~~g~~~iVDav-qs~g~~~idv---------~~--~D~~~~s~~K~lg~~~G-l~~~~~---s~~~~~~~~ 207 (361)
T TIGR01366 147 VRRP---EGSDDALVVIDAT-SGAGGLPVDI---------AE--TDVYYFAPQKNFASDGG-LWLAIM---SPAALERIE 207 (361)
T ss_pred cccc---cccCCCeEEEEcC-ccccCCCCCH---------HH--CCEEEEEchhhcCCCCc-eEEEEE---CHHHHhhhh
Confidence 4455 4789999999999 7777643321 11 36788999999998752 455444 666554433
Q ss_pred HH----------H--H----hhccccccCCchHHHH-HHHHHhCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 331 SQ----------L--K----RLARPMYSNPPVHGAR-IVANVVGNPALFDEWKA-EMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 331 ~~----------~--~----~~~~~~~~~~~~~~~~-~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
.. + . ......+.+.+.+... +....++ +.. ++ .++.+.++++++.+++++.|. +++
T Consensus 208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~---~l~--~~gg~e~~~~r~~~l~~~l~~~l~-~~~ 281 (361)
T TIGR01366 208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQID---WMN--GNGGLDWAVARTADSSSRLYSWAQ-ERP 281 (361)
T ss_pred cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHH---HHH--HccCHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 11 0 0 0000112233333322 2222221 110 11 256777999999999999999 876
Q ss_pred CCCCccccc-C------Ccceeeec-CCCHHHHHHHHhcccEEEcCC-----C---cEEEccC-ChhhHHHHHHHHHHHH
Q 012628 393 SGKDWSFIL-R------QIGMFSFT-GLNKAQSDNMTNKWHVYMTKD-----G---RISLAGL-SLAKCEYLADAIIDSY 455 (459)
Q Consensus 393 ~~~~~~~~~-~------~~g~f~~~-~l~~~~~~~ll~~~gI~v~~g-----g---Ris~~~~-~~e~i~~~~~~l~~~~ 455 (459)
. ++... . ..+.+.|. +++.+.+...++++||.+.++ + |||+.+. +++++++++++|++++
T Consensus 282 ~---~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~ 358 (361)
T TIGR01366 282 Y---ATPFVTDPGKRSQVVGTIDFVDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVV 358 (361)
T ss_pred C---cccCCCChhhcccceEEEECCCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 2 22221 1 11334443 456666554445579999776 1 9998776 8899999999999998
Q ss_pred hhc
Q 012628 456 HNV 458 (459)
Q Consensus 456 ~~~ 458 (459)
+++
T Consensus 359 ~~~ 361 (361)
T TIGR01366 359 ERL 361 (361)
T ss_pred hhC
Confidence 875
No 291
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.67 E-value=2.8e-14 Score=139.92 Aligned_cols=221 Identities=17% Similarity=0.173 Sum_probs=146.0
Q ss_pred CCCCC--CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh--
Q 012628 120 KEYLP--IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-- 195 (459)
Q Consensus 120 ~~Y~~--~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-- 195 (459)
+.|+- ..-...+.+.++++-.+ +..++ +++|..|+..+ +++.+.+||+|+++...|.+-...++
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g--------~~a~~--~~SGmaAi~~~--l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~ 114 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGG--------EDALL--FSSGMAAISAA--LLALLKPGDHIVASDDLYGGTYRLLEEL 114 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT---------SEEEE--ESSHHHHHHHH--HHHHS-TTBEEEEESSSSHHHHHHHHHC
T ss_pred cceeccccccHHHHHHHHHHhhcc--------cceee--ccchHHHHHHH--HHhhcccCCceEecCCccCcchhhhhhh
Confidence 44542 33446778888887533 45666 79999999887 66678899999999999987766555
Q ss_pred --hCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-CeeEEeccCC
Q 012628 196 --DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKN-HIPFFDVAYQ 272 (459)
Q Consensus 196 --~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~-~~ii~Deay~ 272 (459)
..|.++..++. -|++++++++++ ++++|++.+|.||+..+ .++++|+++|+++| +++++|+.+.
T Consensus 115 l~~~gv~v~~~d~-------~d~~~l~~~l~~---~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~a 181 (386)
T PF01053_consen 115 LPRFGVEVTFVDP-------TDLEALEAALRP---NTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFA 181 (386)
T ss_dssp HHHTTSEEEEEST-------TSHHHHHHHHCT---TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTT
T ss_pred hcccCcEEEEeCc-------hhHHHHHhhccc---cceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeecccc
Confidence 46888777743 378999999987 89999999999999888 88999999999998 9999999976
Q ss_pred CCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC-hhHHHHHHHHHHhhccccccCCchHHHHH
Q 012628 273 GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS-SDLAARVKSQLKRLARPMYSNPPVHGARI 351 (459)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (459)
....- + ++ ..+-++++.|.+|.++-.|--+|.+++ +.+ ++..+++...... .....+...+..
T Consensus 182 tp~~~----~--pL-----~~GaDivv~S~TKyl~Ghsdv~~G~vv-~~~~~~~~~~l~~~~~~----~G~~~~p~da~l 245 (386)
T PF01053_consen 182 TPYNQ----N--PL-----ELGADIVVHSATKYLSGHSDVMGGAVV-VNGSSELYDRLREFRRL----LGATLSPFDAWL 245 (386)
T ss_dssp HTTTC-------GG-----GGT-SEEEEETTTTTTTSSSE-EEEEE-ESSHHHHHHHHHHHHHH----HT-B--HHHHHH
T ss_pred ceeee----c--cC-----cCCceEEEeeccccccCCcceeeEEEE-ECchhhhhhhhcchhhh----cCccchHHHHHH
Confidence 54321 1 11 123578899999999756655566543 344 5655554433221 121233333333
Q ss_pred HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 352 VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 352 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
+..-|+. +..+.++..++...+.+.|+ +.+
T Consensus 246 l~rgl~T----------l~~R~~~~~~nA~~lA~~L~-~hp 275 (386)
T PF01053_consen 246 LLRGLRT----------LPLRMERQNENAEALAEFLE-EHP 275 (386)
T ss_dssp HHHHHTT----------HHHHHHHHHHHHHHHHHHHH-TST
T ss_pred HhcCCCc----------HHHHHHHHHHHHHHHHHHHH-hCC
Confidence 3333332 34556666777888888888 653
No 292
>PRK04311 selenocysteine synthase; Provisional
Probab=99.67 E-value=8.3e-14 Score=139.76 Aligned_cols=339 Identities=16% Similarity=0.092 Sum_probs=202.2
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCC-----CcccHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
..+||.+.-.++++.+.+++++.+.+++.+++.......|.- ..-+..+++.++++... ++.++ +
T Consensus 79 r~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--------e~a~v--v 148 (464)
T PRK04311 79 RPVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--------EDALV--V 148 (464)
T ss_pred cceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--------CeEEE--E
Confidence 368887765666777777789999999998875432122221 11236888999988643 34556 7
Q ss_pred ccchhHHHHHHHHHHHhCCCCEEEEcCCCCcc------hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcE
Q 012628 158 LSGTGSLRLAAALIERYFPGAKVLISSPTWGN------HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~------~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 231 (459)
++++.|+.++ +..+.+||+|++++..+.. ....++..|++++.++.+ ...+++++++++++ +++
T Consensus 149 ~sgtaAl~l~---l~~l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~----~~t~~~dle~aI~~---~Tk 218 (464)
T PRK04311 149 NNNAAAVLLA---LNALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT----NRTHLRDYEQAINE---NTA 218 (464)
T ss_pred CCHHHHHHHH---HHHhCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC----CCCCHHHHHHhcCc---cCe
Confidence 8888999887 3457899999999864331 234567889999998763 23578999999986 788
Q ss_pred EEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC----CCCCCCChhHHHHHHhcCCeEEEEEcCCcC
Q 012628 232 ILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA----SGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (459)
Q Consensus 232 ~ii~~~p~NPT--G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (459)
++++.+++||+ |.. ...++++|+++|++||+++++|.+...+. ++ .. ..+.+.... ..+.+++++|.+|.
T Consensus 219 lV~~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~g-l~-~~p~~~~~l-~~GaDiv~fSg~K~ 294 (464)
T PRK04311 219 LLLKVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYG-LP-DEPTVQELL-AAGVDLVTFSGDKL 294 (464)
T ss_pred EEEEEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhcc-CC-CCCchhhHH-hcCCcEEEecCccc
Confidence 99889999994 432 12578899999999999999999633321 10 00 011111111 23567999999999
Q ss_pred cccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHH-HH-HHHhCChhhHHHHH-----HHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGAR-IV-ANVVGNPALFDEWK-----AEMEMMAGRIKN 378 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~L~~~~~~~~~~-----~~~~~~~~~~~~ 378 (459)
+|-| ..|++++ .++.++++... .+.+.....-..++.. +. ..++...+ .|+ +-+....++.++
T Consensus 295 LgGp--~~G~i~g---~~~li~~l~~~--~~~r~lr~dk~~l~~l~~~l~~~~~~~~---~~~~i~~l~~l~~~~~~~~~ 364 (464)
T PRK04311 295 LGGP--QAGIIVG---KKELIARLKKH--PLKRALRVDKLTLAALEATLRLYLDPEK---LAEEIPTLRLLTRSPEELRA 364 (464)
T ss_pred ccCC--ceEEEEE---cHHHHHHHhhc--hhHHHHhcchHHHHHHHHHHHHHhChhh---hhhhCcHHHHhcCCHHHHHH
Confidence 8744 3788765 77765554421 1111111111111111 11 11221110 111 123334466666
Q ss_pred HHHHHHHHHhhccCCCC-CcccccC----Ccc------eeee---c---CCCHHHHHHHHhccc--EEEcC-CC--cEEE
Q 012628 379 VRQKLFDSLSAKDKSGK-DWSFILR----QIG------MFSF---T---GLNKAQSDNMTNKWH--VYMTK-DG--RISL 436 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~~-~~~~~~~----~~g------~f~~---~---~l~~~~~~~ll~~~g--I~v~~-gg--Ris~ 436 (459)
+.+.+.+.|+ ....++ ...+... .|| +..| + +++.+.++..+++.. |..+- .+ .+.+
T Consensus 365 ~A~~la~~L~-~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~~~~~~ld~ 443 (464)
T PRK04311 365 RAERLAAALK-AALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRIEDGRLLLDL 443 (464)
T ss_pred HHHHHHHHHH-hccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEECCEEEEEe
Confidence 7788888887 542111 0122211 111 1111 1 345666666666533 43322 13 4456
Q ss_pred ccCChhhHHHHHHHHHHHHh
Q 012628 437 AGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 437 ~~~~~e~i~~~~~~l~~~~~ 456 (459)
.++.++|++.++++|.+++.
T Consensus 444 r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 444 RTLEEEDEERLAAALLEALN 463 (464)
T ss_pred CcCCHHHHHHHHHHHHHHhh
Confidence 67788999999999998764
No 293
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.67 E-value=5.3e-14 Score=124.97 Aligned_cols=284 Identities=19% Similarity=0.162 Sum_probs=184.6
Q ss_pred cHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeee
Q 012628 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY 207 (459)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~ 207 (459)
+..|.+.+++|+.. +.+-+ |+|+.++-+.+ +-+.+.+||.|++...++....-.++.+|.++..||-.
T Consensus 63 I~~F~~dlaeFlg~--------D~~R~--t~GARe~Kfav--Mhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~t 130 (382)
T COG1103 63 IKDFLEDLAEFLGM--------DEVRV--TAGAREAKFAV--MHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNT 130 (382)
T ss_pred HHHHHHHHHHHhCC--------ceeee--cccchhhHHHH--HHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCC
Confidence 46788889999743 45666 99999999998 55557799999999877655555778999999999976
Q ss_pred cCCCCCCCHHHHHHHHHcC----CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012628 208 DPKTVGLDFEGMIADIKAA----PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (459)
Q Consensus 208 ~~~~~~~d~e~l~~~i~~~----~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~ 283 (459)
....+.+++|...+.|.+. .+...+.+++.|...-|.. .+.++++++|+++|+.++...+|.--... .
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dakkva~ic~e~gvPlllN~AYt~Grmp---v-- 202 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAKKVAKICREYGVPLLLNCAYTVGRMP---V-- 202 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhHHHHHHHHHcCCceEeecceeecccc---c--
Confidence 5567899999988877651 2346677777777666766 89999999999999999999998754421 1
Q ss_pred hHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhh---ccccccCCchHHHHHHHHHhCChh
Q 012628 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL---ARPMYSNPPVHGARIVANVVGNPA 360 (459)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~~~~ 360 (459)
+. .....+++++|-+|+++..| .+|.+.. ..+..+.+...-.+. +.-...++...++.++..+-+-|.
T Consensus 203 -s~----ke~g~DFiVgSGHKsmAAs~-PiGvl~~---~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~ 273 (382)
T COG1103 203 -SG----KEIGADFIVGSGHKSMAASA-PIGVLAM---SEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPH 273 (382)
T ss_pred -cc----cccCCCEEEecCccchhccC-CeeEEee---hhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHH
Confidence 11 12346789999999998554 5998866 777666555433110 000111222333344443333343
Q ss_pred hH---HHHHHHHHHHHHHHHHHHHHHHHHHhhccC------C-CCCcccc-------------cCCcceeeecCCCHHHH
Q 012628 361 LF---DEWKAEMEMMAGRIKNVRQKLFDSLSAKDK------S-GKDWSFI-------------LRQIGMFSFTGLNKAQS 417 (459)
Q Consensus 361 ~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g------~-~~~~~~~-------------~~~~g~f~~~~l~~~~~ 417 (459)
.. ..|++++++ .+++.+.|+ ++| . |...+.. .+.+|||++
T Consensus 274 V~eRVkrWdeEv~k--------aR~fv~elE-kigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY-------- 336 (382)
T COG1103 274 VVERVKRWDEEVEK--------ARWFVAELE-KIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLY-------- 336 (382)
T ss_pred HHHHHHHHHHHHHH--------HHHHHHHHH-HhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeH--------
Confidence 32 224444433 334445555 443 1 1100000 122233322
Q ss_pred HHHHhcccEE-EcCCC----cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 418 DNMTNKWHVY-MTKDG----RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 418 ~~ll~~~gI~-v~~gg----Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+.| ++.||. +.||- .+|+-+++.|+++++++++++++++.
T Consensus 337 ~EL-K~RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 337 EEL-KKRGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred HHH-HhcCccccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 333 445886 44553 67888889999999999999998864
No 294
>PRK07046 aminotransferase; Validated
Probab=99.66 E-value=1.9e-13 Score=137.82 Aligned_cols=334 Identities=14% Similarity=0.056 Sum_probs=189.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccch
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGT 161 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt 161 (459)
+...||+..|.--...+.. +|.|.+++.+.++......+ +.....++.+.+++.. + .+.+.+ +++|+
T Consensus 74 G~~yiD~~~g~g~~~lGh~--~p~i~~Av~~q~~~~~~~~~-~~~~~~~lAe~l~~~~----~----~~~v~F--~nSGt 140 (453)
T PRK07046 74 GHRYDDFCLGDTGAMFGHS--PAPVARALAEQARRGLTTML-PSEDAAWVGEELARRF----G----LPYWQV--ATTAT 140 (453)
T ss_pred CCEEEEecccccccccCCC--CHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHh----C----CCEEEE--ECCHH
Confidence 3568888777532222433 68999999998876432332 3344445556665553 1 367888 99999
Q ss_pred hHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-h-CCCCe------eeee--eec---CCCCCCCHHHHHHHHHcCCC
Q 012628 162 GSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-D-ARVPW------SEYR--YYD---PKTVGLDFEGMIADIKAAPG 228 (459)
Q Consensus 162 ~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~-~G~~v------~~v~--~~~---~~~~~~d~e~l~~~i~~~~~ 228 (459)
+|...+.++.+.+...++|+..+-+|.++....- . .+.+. ..++ ... .-.+ -|++.+++.+.. +
T Consensus 141 EA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~--~ 217 (453)
T PRK07046 141 DANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALAD--G 217 (453)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCC--C
Confidence 9999999888777666889999988887632111 1 00000 0000 000 0001 278999988853 3
Q ss_pred CcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 229 GSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
+...+|+.....-.|.+ .+++-+++|.++|++||+++|.||+.. +..+ .. ......+..++++ +|+|.+|
T Consensus 218 ~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g-~G----g~~~~~gv~PDi~---t~gK~lg 288 (453)
T PRK07046 218 DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSG-PG----GYTRAHGLEPDFL---VVGKPIA 288 (453)
T ss_pred CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccC-Cc----chhHHhCCCccce---eehhhhc
Confidence 45555554444444544 556789999999999999999999964 4321 10 1112223334544 5899999
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHH-----h-hccccccCCchHHHHHHH---HHhCChhhHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLK-----R-LARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAGRIKN 378 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~~ 378 (459)
.|+.+|.+.+ .++..+.+..... . ....++ +.+.++..++. ..+.++++ +++..+.-+.
T Consensus 289 -gG~Pi~av~g---~~~i~~~~~~~~~~~~~~~~~~~~T~-~gnpl~~aa~~a~L~~l~~~~~-------~~~~~~~g~~ 356 (453)
T PRK07046 289 -GGVPCAVYGF---SAELAERAQAAKASAPPGHSGIGTTL-SANALAMAAMRATLAEVMTEAA-------YAHMLALAAR 356 (453)
T ss_pred -CCCcceeeee---hHHHHHHHhhccccCCCCCceeCCCC-cccHHHHHHHHHHHHHHhcccH-------HHHHHHHHHH
Confidence 7999998866 7775544432100 0 111223 33333333333 33333322 1222222333
Q ss_pred HHHHHHHHHhhccCCCCCcccccCCcceeee-c-C------------CCH----HHHHHHHhcccEEEcCCC---cEEEc
Q 012628 379 VRQKLFDSLSAKDKSGKDWSFILRQIGMFSF-T-G------------LNK----AQSDNMTNKWHVYMTKDG---RISLA 437 (459)
Q Consensus 379 ~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~-~-~------------l~~----~~~~~ll~~~gI~v~~gg---Ris~~ 437 (459)
.++.|.+.+. +.+++. . +...|.++.+ . . .+. .+...+++ +||.+.|.+ +++..
T Consensus 357 l~~~L~~l~~-~~~~~~--~-v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~~~~~~p~ 431 (453)
T PRK07046 357 LAAGLRAVIA-RHGLPW--H-VTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLN-RGVLITPFHNMMLVCPA 431 (453)
T ss_pred HHHHHHHHHH-hCCCCe--E-EEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHH-CCCEEecccCcEEEeCC
Confidence 3333333333 444321 1 2223333321 1 1 011 22345556 599998865 66765
Q ss_pred cCChhhHHHHHHHHHHHHhhc
Q 012628 438 GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 438 ~~~~e~i~~~~~~l~~~~~~~ 458 (459)
. ++++|+++++++.++++++
T Consensus 432 ~-t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 432 T-TAADVDRLVAAFDACLGEL 451 (453)
T ss_pred C-CHHHHHHHHHHHHHHHHHH
Confidence 4 9999999999999999765
No 295
>PLN02880 tyrosine decarboxylase
Probab=99.66 E-value=2.1e-13 Score=138.53 Aligned_cols=317 Identities=9% Similarity=0.026 Sum_probs=194.3
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCCCcccc-----CceEEeecccchhHHHHHHHHHHHhC---------CCCEEEEcCC
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKE-----QRVATVQGLSGTGSLRLAAALIERYF---------PGAKVLISSP 185 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~-----~~i~~~~t~ggt~a~~l~~~~~~~~~---------~gd~Vlv~~p 185 (459)
..|....+..++.+.+.+|+....|.+-.. ..-++ |+|||+++..+....+... +.-.|++++-
T Consensus 112 ~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~--tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~ 189 (490)
T PLN02880 112 FSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI--QGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQ 189 (490)
T ss_pred cccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE--cCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCC
Confidence 445445566788888888887776654210 12455 8999999987743333211 1125667878
Q ss_pred CCcchHHHhhhCCCC---eeeeeeecCCCCCCCHHHHHHHHHc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 012628 186 TWGNHKNIFNDARVP---WSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (459)
Q Consensus 186 ~y~~~~~~~~~~G~~---v~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~ 259 (459)
++......+..+|.. ++.||+++.+++.+|++.|+++|.+ ....+.+|+-+....+||.+ +++++|+++|+
T Consensus 190 aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai---Dpl~eI~~i~~ 266 (490)
T PLN02880 190 THSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV---DPLLELGKIAK 266 (490)
T ss_pred chHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc---CcHHHHHHHHH
Confidence 888899999999985 7889986445789999999999975 22345677777889999999 99999999999
Q ss_pred hcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHH-HHHHHHHHhhc
Q 012628 260 EKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA-ARVKSQLKRLA 337 (459)
Q Consensus 260 ~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~-~~~~~~~~~~~ 337 (459)
+||+|+++|.||.++.... ...+..+.. ..-+.+..+++|.+. ....+|.+.+ +++... ..+......+.
T Consensus 267 ~~~iwlHVDaA~gg~~~~~-----~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llv--r~~~~l~~~~~~~~~Yl~ 338 (490)
T PLN02880 267 SNGMWFHVDAAYAGSACIC-----PEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWV--KDRNALIQSLSTNPEFLK 338 (490)
T ss_pred HcCCEEEEehhhHHHHHhC-----HHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEE--eCHHHHHHHHccCHHHhc
Confidence 9999999999998875321 122222222 234678889999986 4566788754 343321 11111000000
Q ss_pred ccc-----ccCCch----H--HHHHHHH--HhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC-C
Q 012628 338 RPM-----YSNPPV----H--GARIVAN--VVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-Q 403 (459)
Q Consensus 338 ~~~-----~~~~~~----~--~~~~~~~--~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-~ 403 (459)
... ..+... . -.+++.. .|+..+ .+.++++.++.-++++++.+.|+ +.. +++++.+ .
T Consensus 339 ~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G-----~~g~~~~i~~~~~lA~~~~~~l~-~~~---~~el~~~~~ 409 (490)
T PLN02880 339 NKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYG-----VENLQSYIRNHIKLAKEFEQLVA-QDS---RFEVVTPRI 409 (490)
T ss_pred CccccccCCCChhccCcCCCCcccHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHh-cCC---CEEEecCCc
Confidence 000 000000 0 0001111 011101 23345555655688888988887 652 1555443 4
Q ss_pred cceeeec--C--CC--------HHHHHHHHhcccEEEcCC---C----cEEEccC--ChhhHHHHHHHHHHHHhhc
Q 012628 404 IGMFSFT--G--LN--------KAQSDNMTNKWHVYMTKD---G----RISLAGL--SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 404 ~g~f~~~--~--l~--------~~~~~~ll~~~gI~v~~g---g----Ris~~~~--~~e~i~~~~~~l~~~~~~~ 458 (459)
.++.+|- + .+ .+..++|.++..+.+... | |+++... ++++++.+++.|.++.+++
T Consensus 410 ~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 410 FSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred eEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4544442 1 11 234556666666766543 3 9998765 5689999999998877653
No 296
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.66 E-value=9.1e-14 Score=125.90 Aligned_cols=312 Identities=14% Similarity=0.129 Sum_probs=199.2
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCCC---cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCC
Q 012628 102 VLDVVKKAENLMLERGENKEYLPI---EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGA 178 (459)
Q Consensus 102 ~~~~v~~a~~~~~~~~~~~~Y~~~---~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd 178 (459)
+++.|.+|+..-. .+|... +=..++++-+...+.... +.-.++ ...|+.+.+.+ +.+.+.|||
T Consensus 28 l~~~V~~A~~~~~-----lgh~sPe~~qIm~~v~egikyVFkT~n-----~~tf~i--sgsGh~g~E~a--l~N~lePgd 93 (385)
T KOG2862|consen 28 LSGRVQEAMSRPS-----LGHMSPEFVQIMDEVLEGIKYVFKTAN-----AQTFVI--SGSGHSGWEAA--LVNLLEPGD 93 (385)
T ss_pred CCHHHHHhhcCCc-----cccCCHHHHHHHHHHHHHHHHHhccCC-----CceEEE--ecCCcchHHHH--HHhhcCCCC
Confidence 4677777775532 223221 122344555444433322 234455 66778899988 777788999
Q ss_pred EEEEcCCC-Cc-chHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHH
Q 012628 179 KVLISSPT-WG-NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIA 255 (459)
Q Consensus 179 ~Vlv~~p~-y~-~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~-l~~i~ 255 (459)
.|++..-+ |. .+....+++|++|..++. +.+....+|.+.+++.++ +.++++++....-||+. ++ ++.+.
T Consensus 94 ~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~--~~G~~~~le~i~~~lsqh--~p~~vfv~hgdsSTgV~---q~~~~~~g 166 (385)
T KOG2862|consen 94 NVLVVSTGTWGQRAADCARRYGAEVDVVEA--DIGQAVPLEEITEKLSQH--KPKAVFVTHGDSSTGVL---QDLLAISG 166 (385)
T ss_pred eEEEEEechHHHHHHHHHHhhCceeeEEec--CcccCccHHHHHHHHHhc--CCceEEEEecCcccccc---chHHHHHH
Confidence 99988754 43 356788999999999977 567789999999999985 55677777778888888 66 77888
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCccc-CCCCcceEEEEeCChhHHHHHHHHHH
Q 012628 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL-YAERIGAMNVVCSSSDLAARVKSQLK 334 (459)
Q Consensus 256 ~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RiG~~~~v~~~~~~~~~~~~~~~ 334 (459)
++|++|+.++++|.+ ..++-.++..|.|.+ ++.+.+| -|.++. +|+ +- +|.++...+++.+.-.
T Consensus 167 ~lc~k~~~lllVD~V-aSlggt~F~mDewgV--------DvaytgS-QKaL~aP~GL--si---isfS~ka~~~~~~rK~ 231 (385)
T KOG2862|consen 167 ELCHKHEALLLVDTV-ASLGGTEFEMDEWGV--------DVAYTGS-QKALGAPAGL--SI---ISFSDKALEAIRDRKT 231 (385)
T ss_pred HHhhcCCeEEEEech-hhcCCccceehhhcc--------cEEEecc-hhhcCCCCCc--ce---eecCHHHHHHHhhccC
Confidence 999999999999999 666644343444432 3445444 577754 453 33 3558777777665433
Q ss_pred hhc-----------c-------cccc-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012628 335 RLA-----------R-------PMYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 395 (459)
Q Consensus 335 ~~~-----------~-------~~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 395 (459)
+.. . ..|. .+|.........+|. ...++.+++..+++++..++++..|+ ++|+..
T Consensus 232 ~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~-----~I~eeGL~~~~~rH~e~s~~l~~~l~-~~GLq~ 305 (385)
T KOG2862|consen 232 KPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALA-----LIAEEGLENSWRRHREMSKWLKLSLE-ALGLQL 305 (385)
T ss_pred CceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH-HhCccc
Confidence 111 0 0111 233322222222221 11246688999999999999999999 988521
Q ss_pred CcccccC-------CcceeeecCCCH-HHHHHHHhcccEEEcCC-----C---cEEEccC--ChhhHHHHHHHHHHHHhh
Q 012628 396 DWSFILR-------QIGMFSFTGLNK-AQSDNMTNKWHVYMTKD-----G---RISLAGL--SLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 396 ~~~~~~~-------~~g~f~~~~l~~-~~~~~ll~~~gI~v~~g-----g---Ris~~~~--~~e~i~~~~~~l~~~~~~ 457 (459)
+... -.+.-+-.+.+. +.+.+++.+++|.+..| | ||.+.+. +.|.|+..++.|+.++.+
T Consensus 306 ---fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 306 ---FVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ---eecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 1111 112222235565 55788888767776554 2 9985432 778999999999988865
Q ss_pred c
Q 012628 458 V 458 (459)
Q Consensus 458 ~ 458 (459)
.
T Consensus 383 ~ 383 (385)
T KOG2862|consen 383 K 383 (385)
T ss_pred c
Confidence 3
No 297
>PLN02271 serine hydroxymethyltransferase
Probab=99.66 E-value=5.5e-14 Score=140.21 Aligned_cols=330 Identities=15% Similarity=0.149 Sum_probs=192.9
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCC------CCcccHHHHHHHHHHHhcCCCCcccc--CceEE
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAFNKVTAELLFGADNSVLKE--QRVAT 154 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~aia~~l~~~~~~~~~~--~~i~~ 154 (459)
..-|+|-..++ .+++.|++++...+.+....+|+ -.+.+.++.....+.....++..... -+|
T Consensus 148 ~~~l~LIASEN-------~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNV-- 218 (586)
T PLN02271 148 FKGIELIASEN-------FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNV-- 218 (586)
T ss_pred hcCeeeccccc-------cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccce--
Confidence 36678876664 23788888887776543333332 22333344332223333323322111 233
Q ss_pred eecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh---------hhCCCCeeeee--eecCCCCCCCHHHHHHHH
Q 012628 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---------NDARVPWSEYR--YYDPKTVGLDFEGMIADI 223 (459)
Q Consensus 155 ~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~---------~~~G~~v~~v~--~~~~~~~~~d~e~l~~~i 223 (459)
|..+|+.|+..+ +.+.+.|||+|+..+..+++|.... ...|..+..+| ++ ++++.+|.+++++..
T Consensus 219 -Qp~SGs~AN~aV--~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d-~~~g~IDyd~lek~a 294 (586)
T PLN02271 219 -QPYSCTSANFAV--YTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVN-PQTGYIDYDKLEEKA 294 (586)
T ss_pred -eeccHHHHHHHH--HHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccc-cccCccCHHHHHHHh
Confidence 457888898888 5566889999999998887775432 33454444444 43 456789999999854
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCC
Q 012628 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYS 303 (459)
Q Consensus 224 ~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 303 (459)
.. .++++|++..-.|| .. -++++|.++|+++|+++++|.++..-... .+.... .....+++..|.+
T Consensus 295 ~~--~rPKLII~g~Sayp--r~---~D~~~i~eIAdevGA~LmvD~AH~aGLIa---~g~~~s----P~~~aDvvt~TTH 360 (586)
T PLN02271 295 LD--FRPKILICGGSSYP--RE---WDYARFRQIADKCGAVLMCDMAHISGLVA---AKECVN----PFDYCDIVTSTTH 360 (586)
T ss_pred hh--cCCeEEEECchhcc--Cc---CCHHHHHHHHHHcCCEEEEECcccccccc---cCcCCC----CCcCCcEEEeCCc
Confidence 43 37888988777888 44 45677888999999999999995432211 010000 0112578999999
Q ss_pred cCcccCCCCcceEEEEeCCh---------------hHHHHHHHHHHhhcccc-ccCCch--HHHHHH-HHHhCChhhHHH
Q 012628 304 KNLGLYAERIGAMNVVCSSS---------------DLAARVKSQLKRLARPM-YSNPPV--HGARIV-ANVVGNPALFDE 364 (459)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~---------------~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~-~~~L~~~~~~~~ 364 (459)
|++. |-|=|.++. .+. .....+.+.+....... -+++.. ++..++ ......++
T Consensus 361 KtLr--GPrGG~I~~--r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~e---- 432 (586)
T PLN02271 361 KSLR--GPRGGIIFY--RKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPE---- 432 (586)
T ss_pred ccCC--CCCceEEEe--cccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChH----
Confidence 9982 333477643 221 00001222222222111 112222 222221 11112232
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcce-eeec-----CCCHHHHHHHHhcccEEEc---------
Q 012628 365 WKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGM-FSFT-----GLNKAQSDNMTNKWHVYMT--------- 429 (459)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~-f~~~-----~l~~~~~~~ll~~~gI~v~--------- 429 (459)
.+++.++..++.+.|.+.|. +.| ++++....-. .+++ |++...+++.|++.||.+.
T Consensus 433 ----fk~Ya~QVv~NAkaLA~~L~-~~G----~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~ 503 (586)
T PLN02271 433 ----YKAYMQQVKKNAQALASALL-RRK----CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNG 503 (586)
T ss_pred ----HHHHHHHHHHHHHHHHHHHH-HCC----CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCC
Confidence 35677778888889999998 877 4555322112 2344 3467889999999999873
Q ss_pred ---CCC-cEEEc-----cCChhhHHHHHHHHHHHHh
Q 012628 430 ---KDG-RISLA-----GLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 430 ---~gg-Ris~~-----~~~~e~i~~~~~~l~~~~~ 456 (459)
|+| ||... ++.+++++++.+.|.++++
T Consensus 504 ~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 504 TISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 234 87532 3467899998888888875
No 298
>PRK06062 hypothetical protein; Provisional
Probab=99.65 E-value=2e-13 Score=137.74 Aligned_cols=339 Identities=11% Similarity=0.020 Sum_probs=188.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC--CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...||+..|.--..-++. +|.|.+++.+.++.... ..| ......+|-+.+++..... -+.+.+ +++
T Consensus 52 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~~S 120 (451)
T PRK06062 52 GRRYLDFSSQLVNTNIGHQ--HPKVVAAIQEQAARLCTVAPAH-ANDARSEAARLIAERAPGD------LSKVFF--TNG 120 (451)
T ss_pred CCEEEEcccCHHhhcCCCC--CHHHHHHHHHHHHhcCCcCCcc-CCHHHHHHHHHHHHhCCCC------CCEEEE--cCC
Confidence 4578898887542233443 68899999888765211 112 2223344555555543111 257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh-hCCC-----------CeeeeeeecCCC--CC--CC-------H
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN-DARV-----------PWSEYRYYDPKT--VG--LD-------F 216 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~G~-----------~v~~v~~~~~~~--~~--~d-------~ 216 (459)
|++|++.+.++.+.+....+|+...-+|.+...... ..|. .+..++...... +. -| +
T Consensus 121 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06062 121 GADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL 200 (451)
T ss_pred hHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence 999999998887766555789999888876643222 1110 112222110000 10 12 5
Q ss_pred HHHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC
Q 012628 217 EGMIADIKAA-PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (459)
Q Consensus 217 e~l~~~i~~~-~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~ 294 (459)
+.+++.++.. +++...+|+.....-.|.+ ++++-+++|.++|++||+++|+||+..+|+-.+ ..+.... ..-.+
T Consensus 201 ~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~~~-~gv~P 276 (451)
T PRK06062 201 AHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG---KWFAIEH-FGVVP 276 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCc---HHHHHHh-cCCCC
Confidence 6777777542 2345566655555556766 577889999999999999999999988775321 1222222 22334
Q ss_pred eEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHH---hCChhhHHHHHHHHH
Q 012628 295 ELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEME 370 (459)
Q Consensus 295 ~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---L~~~~~~~~~~~~~~ 370 (459)
+++ +|+|.+| .|+ .+|.+++ .++..+.+... ......++. .+.++..++... +++.+
T Consensus 277 Di~---t~gK~lg-gG~~Pigav~~---~~~i~~~~~~~-~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~~---------- 337 (451)
T PRK06062 277 DLI---TFAKGVN-SGYVPLGGVAI---SEAIAATFADR-PYPGGLTYS-GHPLACAAAVATINAMEEEG---------- 337 (451)
T ss_pred Cee---eechhhh-cCCcCcEEEEE---cHHHHHHhccC-CCCCCCCCC-CCHHHHHHHHHHHHHHHhcC----------
Confidence 544 6899998 674 8999866 66744443210 001122332 233333333333 32222
Q ss_pred HHHHHHHHHH-HHHHHHHhhccC--CCCCcccccCCcceeee--cCC----------------CHHHHHHHHhcccEEEc
Q 012628 371 MMAGRIKNVR-QKLFDSLSAKDK--SGKDWSFILRQIGMFSF--TGL----------------NKAQSDNMTNKWHVYMT 429 (459)
Q Consensus 371 ~~~~~~~~~~-~~l~~~L~~~~g--~~~~~~~~~~~~g~f~~--~~l----------------~~~~~~~ll~~~gI~v~ 429 (459)
..++.+++- +++.+.|+ ++- .|. +..+...|-++.+ ..- ...+...+++ +||.+.
T Consensus 338 -l~~~~~~~G~~~l~~~L~-~l~~~~~~-v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gvl~~ 413 (451)
T PRK06062 338 -IVENAARIGAEVLGPGLR-ELAERHPS-VGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKE-RGLLPF 413 (451)
T ss_pred -HHHHHHHHHHHHHHHHHH-HHHhcCCc-EEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHH-CCcEEe
Confidence 233333333 34444444 321 000 1122223332211 100 0123445555 699987
Q ss_pred CCC---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 430 KDG---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 430 ~gg---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
+.+ ||+... .++++|+++++++.++++.+
T Consensus 414 ~~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 414 VNGNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred ecCCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 654 666432 39999999999999999865
No 299
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.65 E-value=5.8e-14 Score=130.97 Aligned_cols=313 Identities=16% Similarity=0.137 Sum_probs=202.4
Q ss_pred cHHHHHHHHHHhhcC------CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCC
Q 012628 103 LDVVKKAENLMLERG------ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 176 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~------~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~ 176 (459)
.|.|++|+++.+++. ..+--+...-.-+|.+.+|++- ++ +.-+++ ++.--|+....-.++..-|
T Consensus 187 Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH-qK------~aALlF---sSCfVANDstLftLak~lp 256 (570)
T KOG1360|consen 187 HPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH-QK------EAALLF---SSCFVANDSTLFTLAKKLP 256 (570)
T ss_pred ChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh-cC------cceeee---eeeeeccchHHHHHHHHCC
Confidence 688999999988641 0011112333457888888884 43 334554 3332333333223445569
Q ss_pred CCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012628 177 GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (459)
Q Consensus 177 gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~ii~~~p~NPTG~~~s~~~l~~i~ 255 (459)
|.+|+-.+-.+...+.-++..|++-..+.. -|++.|++.++.. +..++++-..+++.-+|.+ .+++||+
T Consensus 257 gcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gav---cpleelc 326 (570)
T KOG1360|consen 257 GCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAV---CPLEELC 326 (570)
T ss_pred CcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCc---CCHHHHH
Confidence 998888887777777777777776555554 2788888888763 3467888889999999999 8899999
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH-HhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHH
Q 012628 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF-ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLK 334 (459)
Q Consensus 256 ~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~ 334 (459)
+++++||.+-++||++.--.|++.. . .+..- .-....+++.+++.|+||+-| ||+.. ...+++.+++...
T Consensus 327 Dvah~yGAiTFlDEVHAVGlYG~rG-a--GvgerdGvm~kvDiIsGTLgKafGcVG---GYIAa---t~~LvDmiRSyAa 397 (570)
T KOG1360|consen 327 DVAHKYGAITFLDEVHAVGLYGPRG-A--GVGERDGVMHKVDIISGTLGKAFGCVG---GYIAA---TRKLVDMIRSYAA 397 (570)
T ss_pred HHHHHhCceeeeehhhhhccccCCC-C--CccccCCcchhhhhcccchhhhccccc---ceehh---hhhHHHHHHHhcC
Confidence 9999999999999996543443211 0 11000 001124688999999999987 89755 8887777777654
Q ss_pred hhccccccCCchHHHHH--HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcce-eeecC
Q 012628 335 RLARPMYSNPPVHGARI--VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGM-FSFTG 411 (459)
Q Consensus 335 ~~~~~~~~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~-f~~~~ 411 (459)
..+.. ++-||.+..-+ +..+|... +=+..+...+++-.++.+.|. +.|+ .+++....+ .+.+|
T Consensus 398 GFIFT-TSLPP~vl~GAleaVr~lk~~--------eg~~lR~~hqrnv~~~kq~l~-~~Gi----PVi~~pSHIiPv~vg 463 (570)
T KOG1360|consen 398 GFIFT-TSLPPMVLAGALEAVRILKSE--------EGRVLRRQHQRNVKYVKQLLM-ELGI----PVIPNPSHIIPVRVG 463 (570)
T ss_pred ceEEe-cCCChHHHHhHHHHHHHHhhh--------hhHHHHHHHHHHHHHHHHHHH-HcCC----cccCCCcceeeeecc
Confidence 44433 33445543222 23344322 124556677778888899999 9985 444333322 24444
Q ss_pred C---CHHHHHHHHhcccEEEcCC-------C----cEEEccC-ChhhHHHHHHHHHHHHhhc
Q 012628 412 L---NKAQSDNMTNKWHVYMTKD-------G----RISLAGL-SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 412 l---~~~~~~~ll~~~gI~v~~g-------g----Ris~~~~-~~e~i~~~~~~l~~~~~~~ 458 (459)
. +.+....|+.++||++..- | ||.-+.- |++-++.+++++..+++++
T Consensus 464 da~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 464 DAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred CHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 3 4466789999999998543 4 6654322 7788899999999888764
No 300
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=3e-13 Score=136.52 Aligned_cols=338 Identities=12% Similarity=0.036 Sum_probs=188.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-...++. +|.|.+++.+.+++.. ...|.+.....+|-+.+++..... .+.+.+ +++
T Consensus 52 G~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~S 121 (457)
T PRK05639 52 GNVFIDFLAGAAAASTGYS--HPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIE------NPKVLF--GLS 121 (457)
T ss_pred CCEEEECCcCHHhhccCCC--CHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCC------cCEEEE--eCc
Confidence 3578898888642333443 7889999988876421 112333333345555555543211 257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-hhhCC--------C-----CeeeeeeecCCC--CC----CCHH--
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDAR--------V-----PWSEYRYYDPKT--VG----LDFE-- 217 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~-~~~~G--------~-----~v~~v~~~~~~~--~~----~d~e-- 217 (459)
|++|++.+.++........+|+....+|.+.... +...| . .++.+|..+... +. -|.+
T Consensus 122 GsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 201 (457)
T PRK05639 122 GSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDEL 201 (457)
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHH
Confidence 9999999998877666667899988888764322 11111 1 133344321100 00 1222
Q ss_pred ------HHHHHHHc---CCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012628 218 ------GMIADIKA---APGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (459)
Q Consensus 218 ------~l~~~i~~---~~~~~~~ii~~~p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~ 287 (459)
.+++.+.. .++....+|+...+...|. .++++-+++|.++|++||+++|.||++.+++-.+ ..+...
T Consensus 202 ~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a~~ 278 (457)
T PRK05639 202 INRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTG---KWFASE 278 (457)
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCc---hHHHHH
Confidence 34443321 1345666776666666777 4567889999999999999999999988765322 222222
Q ss_pred HHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHH
Q 012628 288 LFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKA 367 (459)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~ 367 (459)
. .+..+++++ |+|.++ .|+.+|++++ +++..+ ........++ +.+.++..++...|+ .. ++
T Consensus 279 ~-~gv~PDiv~---~gK~l~-gG~pi~av~~---~~~i~~----~~~~~~~~T~-~g~p~~~aaa~a~l~---~l---~~ 339 (457)
T PRK05639 279 W-FEVKPDLII---FGKGVA-SGMGLSGVIG---RKELMD----LTSGSALLTP-AANPVISAAAEATLE---II---EE 339 (457)
T ss_pred h-cCCCCCEEE---echhhc-CCCcceeEEe---hHHHHh----hcCCCcccCC-CcCHHHHHHHHHHHH---HH---HH
Confidence 2 233345443 899998 7888999866 777433 1111111223 223333333332221 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc----cCCCCCcccccCCcceee--ecC-C---C----HHHHHHHHhcccEEEcCCC-
Q 012628 368 EMEMMAGRIKNVRQKLFDSLSAK----DKSGKDWSFILRQIGMFS--FTG-L---N----KAQSDNMTNKWHVYMTKDG- 432 (459)
Q Consensus 368 ~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~g~f~--~~~-l---~----~~~~~~ll~~~gI~v~~gg- 432 (459)
+...++.+++-++|.+.|+ + +++ +..+.-.|-++. +.. . + ..+.+.+++ +||.+.+.|
T Consensus 340 --~~l~~~~~~~g~~l~~~L~-~l~~~~~~---~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~g~ 412 (457)
T PRK05639 340 --ENLLKNALKVGEFIKKRLL-EMKESFEV---IGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFE-LGLILPSYGM 412 (457)
T ss_pred --ccHHHHHHHHHHHHHHHHH-HHHHhCCC---EEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHh-CCeEEeecCC
Confidence 1223444445555555555 4 221 112223332222 111 0 1 133455666 599997743
Q ss_pred -----cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 433 -----RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 433 -----Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
|+...- .+++++++++++|.++++.+
T Consensus 413 ~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 413 FGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 555332 38999999999999998653
No 301
>PLN02263 serine decarboxylase
Probab=99.65 E-value=2e-13 Score=135.35 Aligned_cols=299 Identities=12% Similarity=0.044 Sum_probs=193.1
Q ss_pred ccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 127 g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+..++.+.+.+|+....|.+-+.-.=.+ |+|||+|+..+....+...+...|++++.++..+...++.+|.+++.||+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~v--tsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~ 207 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYI--TNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDT 207 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEE--eCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEecc
Confidence 5677888888887766665311112345 89999999998555544445568899999999999999999999999998
Q ss_pred ecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCC-----eeEEeccCCCCCCCCCCC
Q 012628 207 YDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH-----IPFFDVAYQGFASGSLDN 281 (459)
Q Consensus 207 ~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~-----~ii~Deay~~~~~~~~~~ 281 (459)
++++.+|++.|+++|.+...++.+++.+.+..+||.+ +++++|+++|+++|+ |+++|.||.++...-. .
T Consensus 208 --d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~-~ 281 (470)
T PLN02263 208 --LVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFV-K 281 (470)
T ss_pred --CCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhc-c
Confidence 4578999999999998744346777778899999999 999999999999997 9999999988753110 1
Q ss_pred ChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHH---HHHhhccccccCCchHHHHHHHH--Hh
Q 012628 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS---QLKRLARPMYSNPPVHGARIVAN--VV 356 (459)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~L 356 (459)
....+. + ...-+-+..+.+|.++. .+..|.+.+ +. ...+.+.. .+.. ... +..-+.-+..++.. .|
T Consensus 282 ~~~~~d-f--~~~vDSIsvD~HK~l~~-P~~cgvll~--R~-~~~~~~~~~~~Yl~~-~d~-ti~gSR~g~~al~lW~~L 352 (470)
T PLN02263 282 RAPKVT-F--KKPIGSVSVSGHKFVGC-PMPCGVQIT--RM-EHINVLSSNVEYLAS-RDA-TIMGSRNGHAPIFLWYTL 352 (470)
T ss_pred cccccC-C--CcCccEEEECCccccCC-CcCEEEEEE--eh-hhHhhhccChHhhCC-CCC-CcCCCCCcHHHHHHHHHH
Confidence 111110 1 11244566799999874 466788754 33 32222211 1111 001 11111111111111 11
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCCCHHHHHHHHhcccEEEcCCC---c
Q 012628 357 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG---R 433 (459)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~gg---R 433 (459)
...+ .+.+++..++.-++.+++.+.|+ +.|+ ..+..|.....+|..-+.+. ..+ |..+..-+ +
T Consensus 353 ~~~G-----~~G~~~~i~~~~~~A~~l~~~l~-~~g~---~~~~~p~s~~V~f~~p~~~~---~~~--gW~L~~~~~~~H 418 (470)
T PLN02263 353 NRKG-----YRGFQKEVQKCLRNAHYLKDRLR-EAGI---SAMLNELSSTVVFERPKDEE---FVR--RWQLACQGNIAH 418 (470)
T ss_pred HHhC-----HHHHHHHHHHHHHHHHHHHHHHH-hCCC---eEEeCCCceEEEEecCchHH---hhc--ceEEccCCCcEE
Confidence 1111 34567788888889999999999 8763 23445665555554322222 123 44444433 8
Q ss_pred EEEcc-CChhhHHHHHHHHHHHHh
Q 012628 434 ISLAG-LSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 434 is~~~-~~~e~i~~~~~~l~~~~~ 456 (459)
|.+.. .+.+.++++++.|++..+
T Consensus 419 ivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 419 VVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred EEEcCCCCHHHHHHHHHHHHHHHh
Confidence 88765 478899999999988765
No 302
>PRK07678 aminotransferase; Validated
Probab=99.65 E-value=3.4e-13 Score=136.22 Aligned_cols=337 Identities=11% Similarity=0.060 Sum_probs=187.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCC--CCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...||+..|..-...++. +|.|.+++.+.++..... .| +.....+|.+.+++.... .+.+.+ +++
T Consensus 46 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~-~~~~~~~lae~l~~~~~~-------~~~v~f--~~s 113 (451)
T PRK07678 46 GNRYLDGMSGLWCVNVGYG--RKELAEAAYEQLKTLSYFPLTQ-SHEPAIKLAEKLNEWLGG-------EYVIFF--SNS 113 (451)
T ss_pred CCEEEEccccHHhhcCCCC--CHHHHHHHHHHHHhcCcccccc-CCHHHHHHHHHHHHhCCC-------CCEEEE--eCC
Confidence 4578888877542233443 788999988887643111 12 222233455555554311 247888 999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHhh-hCC------------CCeeeeeeecCCCCCC------
Q 012628 160 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DAR------------VPWSEYRYYDPKTVGL------ 214 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~-~~G------------~~v~~v~~~~~~~~~~------ 214 (459)
|++|++.+.++.+.+. +| .+|+...-+|.+...... ..| ..+..+|.. +.+..
T Consensus 114 GseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 191 (451)
T PRK07678 114 GSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPP--DCYRMPGIESE 191 (451)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCC--ccccccccCCh
Confidence 9999999988877653 23 578988888876543222 111 112223321 11111
Q ss_pred ---C---HHHHHHHHH-cCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012628 215 ---D---FEGMIADIK-AAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (459)
Q Consensus 215 ---d---~e~l~~~i~-~~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~ 286 (459)
| ++.+++.+. ..++....+|+...+.-.|.+ ++++-++++.++|++||+++|.||+..+|+-.+ ..+..
T Consensus 192 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~~~ 268 (451)
T PRK07678 192 DIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG---KAFGF 268 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc---hhHHH
Confidence 1 223555564 223456666665555556665 577789999999999999999999988886321 22333
Q ss_pred HHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHH---hhccccccCCchHHHHHHHHHh---CCh
Q 012628 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---RLARPMYSNPPVHGARIVANVV---GNP 359 (459)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~L---~~~ 359 (459)
.. .+-.++++ +++|.+| .| +.+|.+++ +++..+.+..... .....++ +.+.++..++...| ++.
T Consensus 269 ~~-~gv~PDiv---t~gK~lg-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~h~~T~-~gnp~~~aaa~a~l~~l~~~ 339 (451)
T PRK07678 269 MN-YGVKPDII---TMAKGIT-SAYLPLSATAV---KKEIYEAFKGKGEYEHFRHVNTF-GGNPAACALALKNLEIMENE 339 (451)
T ss_pred Hh-cCCCCCEE---Eeecccc-cCCcceeEEEE---cHHHHHHHhccCcccccccCCCC-CcCHHHHHHHHHHHHHHHhC
Confidence 22 23334555 6799998 66 68999866 7775544432110 0122333 33333333443332 222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccCCCCCcccccCCcceee--ecC-------CCH----HHHHHHHhc
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFS--FTG-------LNK----AQSDNMTNK 423 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~g~f~--~~~-------l~~----~~~~~ll~~ 423 (459)
...++.+++-++|.+.|++ +++. +..+...|.++. +.. .+. .+...+++
T Consensus 340 -----------~~~~~~~~~g~~l~~~l~~~~~~~~~---v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~- 404 (451)
T PRK07678 340 -----------NLIERSAQLGELLLEQLKEELGEHPL---VGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKE- 404 (451)
T ss_pred -----------CHHHHHHHHHHHHHHHHHHHHhcCCC---EEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHH-
Confidence 2233444444444444430 3331 112223333331 111 011 23445555
Q ss_pred ccEEEcCC--------C--cEEEc-cCChhhHHHHHHHHHHHHhhcC
Q 012628 424 WHVYMTKD--------G--RISLA-GLSLAKCEYLADAIIDSYHNVS 459 (459)
Q Consensus 424 ~gI~v~~g--------g--Ris~~-~~~~e~i~~~~~~l~~~~~~~~ 459 (459)
+||.+.+. . ||+.. ..+++||+++++++.++++++.
T Consensus 405 ~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 405 KGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred CCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 59998653 2 55533 2389999999999999998763
No 303
>PLN02590 probable tyrosine decarboxylase
Probab=99.65 E-value=6.4e-13 Score=135.19 Aligned_cols=329 Identities=10% Similarity=0.034 Sum_probs=202.9
Q ss_pred HHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccc-----cCceEEeecccchhHHHHHHHHHHHh--------
Q 012628 108 KAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLK-----EQRVATVQGLSGTGSLRLAAALIERY-------- 174 (459)
Q Consensus 108 ~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~-----~~~i~~~~t~ggt~a~~l~~~~~~~~-------- 174 (459)
+.+...+.. ....|....+..++.+.+.+|+....|.+-. ...-++ |+|||+|+..+....+..
T Consensus 149 d~l~sa~n~-~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~--~sGgSeAnl~al~aAR~~~~~~~g~~ 225 (539)
T PLN02590 149 EMLNAGLSV-VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI--QGTGCEAVLVVVLAARDRILKKVGKT 225 (539)
T ss_pred HHHHHhccc-ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE--cCchHHHHHHHHHHHHHHHHhhhccc
Confidence 334444432 2355666677788888999998887776421 122445 899999997764332221
Q ss_pred -CCCCEEEEcCCCCcchHHHhhhCCC---CeeeeeeecCCCCCCCHHHHHHHHHc---CCCCcEEEEeCCCCCCCCCCCC
Q 012628 175 -FPGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPT 247 (459)
Q Consensus 175 -~~gd~Vlv~~p~y~~~~~~~~~~G~---~v~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~ii~~~p~NPTG~~~s 247 (459)
.+.-.|++++.++......++.+|. .++.||++..+++.+|++.|+++|.+ ....+.+|+-+.....||.+
T Consensus 226 ~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai-- 303 (539)
T PLN02590 226 LLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV-- 303 (539)
T ss_pred CCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc--
Confidence 0222566778888889999999888 58889986445789999999999965 22345677777789999999
Q ss_pred HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHH
Q 012628 248 PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLA 326 (459)
Q Consensus 248 ~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~ 326 (459)
+++++|+++|++||+|+++|.||.++..-. +..+.+... ..-+-+..+++|.+.. ..-+|.+. ++++...
T Consensus 304 -Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~-----~~~r~~~~Gie~ADSit~D~HK~l~~-p~~cg~ll--vr~~~~l 374 (539)
T PLN02590 304 -DPLVPLGNIAKKYGIWLHVDAAYAGNACIC-----PEYRKFIDGIENADSFNMNAHKWLFA-NQTCSPLW--VKDRYSL 374 (539)
T ss_pred -CCHHHHHHHHHHhCCeEEEecchhhhhhcC-----hhhHHHhcCCccCCEEEECchhhcCc-CcCEEEEE--ecCHHHH
Confidence 999999999999999999999999876321 122333322 2235567799999874 45577774 4554322
Q ss_pred -HHHH---HHHHhhcc--------ccc-cCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 012628 327 -ARVK---SQLKRLAR--------PMY-SNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS 393 (459)
Q Consensus 327 -~~~~---~~~~~~~~--------~~~-~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 393 (459)
+.+. ..+..... ..+ ...+.- .+++..++. +...-.+.++++.++.-++.+++.+.|+ +.+
T Consensus 375 ~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr-~raLklW~~---lr~~G~~G~~~~i~~~~~lA~~~~~~l~-~~~- 448 (539)
T PLN02590 375 IDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRR-FRSLKLWMV---LRLYGSENLRNFIRDHVNLAKHFEDYVA-QDP- 448 (539)
T ss_pred HHHhhcCHHHhCCcccccccCCCccccCCCCCCc-hHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCC-
Confidence 1111 11110000 000 001111 122211110 0000135577888888889999999998 653
Q ss_pred CCCccccc-CCcceeeec--C--CC--------HHHHHHHHhcccEEEcCC---C----cEEEccC--ChhhHHHHHHHH
Q 012628 394 GKDWSFIL-RQIGMFSFT--G--LN--------KAQSDNMTNKWHVYMTKD---G----RISLAGL--SLAKCEYLADAI 451 (459)
Q Consensus 394 ~~~~~~~~-~~~g~f~~~--~--l~--------~~~~~~ll~~~gI~v~~g---g----Ris~~~~--~~e~i~~~~~~l 451 (459)
.|+++. ++-+..+|- + .+ .++.+++.+.-.+++.+. | |+++.+. ++++++.+++.|
T Consensus 449 --~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i 526 (539)
T PLN02590 449 --SFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQII 526 (539)
T ss_pred --CeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 266554 344444442 1 12 233445555544555543 3 9988764 688999999999
Q ss_pred HHHHhhc
Q 012628 452 IDSYHNV 458 (459)
Q Consensus 452 ~~~~~~~ 458 (459)
.+...++
T Consensus 527 ~~~a~~~ 533 (539)
T PLN02590 527 QKHASKF 533 (539)
T ss_pred HHHHHHh
Confidence 8876553
No 304
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.65 E-value=2.5e-15 Score=139.08 Aligned_cols=285 Identities=12% Similarity=0.086 Sum_probs=166.7
Q ss_pred cHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh--CC--CCEEEEcCCCCcchHHHhhhCCCCeee
Q 012628 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FP--GAKVLISSPTWGNHKNIFNDARVPWSE 203 (459)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~--~~--gd~Vlv~~p~y~~~~~~~~~~G~~v~~ 203 (459)
.++|.+.|.++-....+...+...|++ ..|+|+-++.+.-.+..- .. --.|+...|.|+.|....+...-....
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~--GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~ 122 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVF--GTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYK 122 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEE--ECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEE--cCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcc
Confidence 378888888875444444445567877 888898888873333222 11 148999999999999887765443333
Q ss_pred eeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCCh
Q 012628 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDA 283 (459)
Q Consensus 204 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~ 283 (459)
..-+ ...|. +...+.+.+=++++||||.|.+ .+.+ ++.-+..+|.|-||..-.|.++
T Consensus 123 w~Gd-a~~~~----------~~~~~~~~IElVTSPNNPDG~l-----r~~V---~~g~~~k~I~D~AYYWPhyTpI---- 179 (363)
T PF04864_consen 123 WAGD-ASNFK----------NSDNPSPYIELVTSPNNPDGQL-----REAV---LNGSSGKVIHDLAYYWPHYTPI---- 179 (363)
T ss_dssp EEEE-CCCGT----------T-S-CCGEEEEEESS-TTT-----------S---STTTEEEEEEE-TT-STTTS------
T ss_pred cccc-HHhhc----------cCCCCCCeEEEEeCCCCCcccc-----cchh---cCCCCcceeeeeeeeccccccc----
Confidence 3322 12221 1111357788889999999988 2222 3455677899999998877532
Q ss_pred hHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCCh--hh
Q 012628 284 SSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNP--AL 361 (459)
Q Consensus 284 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~ 361 (459)
. ...+.+|.++|+||.-|-+|-|+||. +.++++..+++...+. ..+.+++.=+|.-+..+|+-- .+
T Consensus 180 ---~---~~aD~DiMLFT~SK~TGHAGSR~GWA--lVKD~~Va~kM~~y~~----lnTiGvS~dsQLRa~kiLk~v~~~~ 247 (363)
T PF04864_consen 180 ---T---APADHDIMLFTLSKLTGHAGSRFGWA--LVKDEEVAKKMTKYME----LNTIGVSRDSQLRALKILKVVLDGY 247 (363)
T ss_dssp -------S-B--SEEEEEHHHHCS-GGG-EEEE--EES-HHHHHHHHHHHH----HHCSS--HHHHHHHHHHHHHHHHHC
T ss_pred ---C---CCCCCceEEEEEecccCcccccccee--eecCHHHHHHHHHHHH----HhcccCcHHHHHHHHHHHHHHHhcc
Confidence 1 12356799999999999999999999 5688886666555544 345577887887776665310 00
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccc-------------cCCcceeeecCCCH---HHHHHHHhc
Q 012628 362 FDE--WKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFI-------------LRQIGMFSFTGLNK---AQSDNMTNK 423 (459)
Q Consensus 362 ~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-------------~~~~g~f~~~~l~~---~~~~~ll~~ 423 (459)
... -.+...--++.++++.+.|.+.+. .-+. ++.. .....-|.|+.... +.+...+++
T Consensus 248 ~~~~~~~~~F~f~~~~M~~RW~~L~~~~~-~S~r---FSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~ 323 (363)
T PF04864_consen 248 GTEKGTEDIFHFGYSTMRERWEKLRAAVS-ASKR---FSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLRE 323 (363)
T ss_dssp CHHTTTTSHHHHHHHHHHHHHHHHHHHHC-CSSS---EEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHC
T ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHHH-hcCc---eecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHh
Confidence 000 001234456667777777777776 4321 1111 11234588887642 458888889
Q ss_pred ccEEEcCCC---------cEEEccCChhhHHHHHHHHHHH
Q 012628 424 WHVYMTKDG---------RISLAGLSLAKCEYLADAIIDS 454 (459)
Q Consensus 424 ~gI~v~~gg---------Ris~~~~~~e~i~~~~~~l~~~ 454 (459)
+||..+.|. |||+-. ++++++.++++|..+
T Consensus 324 ~~I~tr~G~~fga~~ryVRlSml~-~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 324 AKIITRSGVLFGADSRYVRLSMLK-RDDDFDQLLERLSKL 362 (363)
T ss_dssp TTEEEEEGGGGTS-TTEEEEESSS--HHHHHHHHHHHHCC
T ss_pred CCcccCCCCccCCCCCeEEEeccC-CHHHHHHHHHHHHhh
Confidence 999999883 999987 899999999999764
No 305
>PRK07482 hypothetical protein; Provisional
Probab=99.64 E-value=4e-13 Score=135.96 Aligned_cols=340 Identities=14% Similarity=0.055 Sum_probs=189.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...||+..|..-..-++. +|+|.+++.+.+++.. ...+ .+.....+|-+.+++..... -+.+.+ ++
T Consensus 49 G~~ylD~~sg~~~~~lGh~--~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~ 118 (461)
T PRK07482 49 GRRYIDAFAGLYCVNVGYG--RTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAG------MSKVYY--GL 118 (461)
T ss_pred CCEEEEcccchhhhcCCCC--CHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eC
Confidence 4578899888653333443 7889999998886531 0111 12222334444444442111 357888 99
Q ss_pred cchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHhhh-CC------------CCeeeeeeecCCCC---C---
Q 012628 159 SGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKTV---G--- 213 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~~---~--- 213 (459)
+|++|++.+.++...+. + ..+|+....+|.+....... .| ..+..+|....... +
T Consensus 119 sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 198 (461)
T PRK07482 119 SGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSE 198 (461)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCH
Confidence 99999999988876542 2 35789888888765322111 11 11222222100000 0
Q ss_pred -----CCHHHHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012628 214 -----LDFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (459)
Q Consensus 214 -----~d~e~l~~~i~~-~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~ 286 (459)
-+++.+++.+.. .++....+|+...+...|.+ ++++-+++|.++|++||+++|.||+..+|+-.+ ..+..
T Consensus 199 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~ 275 (461)
T PRK07482 199 EQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLG---SMFGS 275 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc---chhhH
Confidence 145777777753 23455666666666666776 577789999999999999999999998886321 22333
Q ss_pred HHHHhcCCeEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHH---h-hccccccCCchHHHHHHHHH---hCC
Q 012628 287 RLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVANV---VGN 358 (459)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~---L~~ 358 (459)
.. .+-.++++ .++|.++ .|+ .+|.+++ .++..+.+..... . ...+++ +.+.++..++... +++
T Consensus 276 ~~-~gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~Aaa~a~L~~~~~ 346 (461)
T PRK07482 276 DH-YGIEPDLI---TVAKGLT-SAYAPLSGSIV---GEKVWDVLEQGSDEHGAIGHGWTY-SGHPICAAAALANLDILER 346 (461)
T ss_pred Hh-cCCCCCEE---EEccccc-cCccccceeee---cHHHHHHHhcccccCCccccCCCC-CcCHHHHHHHHHHHHHHHh
Confidence 22 23345555 4799998 675 8888865 6664433321100 1 122223 3344444444333 332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccCCCCCcccccCCcceeee-c-C-C------C------HHHHHHH
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSF-T-G-L------N------KAQSDNM 420 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~g~f~~-~-~-l------~------~~~~~~l 420 (459)
+ ...++.+++-++|.+.|++ +++. +..+.-.|.++.. + . - + ..+...+
T Consensus 347 ~-----------~l~~~~~~~g~~l~~~L~~l~~~~~~---v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~ 412 (461)
T PRK07482 347 E-----------NLVGNAAEVGAYFRARLRAAFGDHPL---VGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAA 412 (461)
T ss_pred C-----------CHHHHHHHHHHHHHHHHHHHHhcCCC---EEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHH
Confidence 2 2234444555555555540 3321 1122233323211 1 1 0 1 1234455
Q ss_pred HhcccEEEcCC--C---cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 421 TNKWHVYMTKD--G---RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 421 l~~~gI~v~~g--g---Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
++ +||.+.+. | |+..+ ..++++++++++++.++++++
T Consensus 413 ~~-~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 413 LE-RGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred HH-CCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 65 69998643 4 66422 239999999999999988753
No 306
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.64 E-value=2.3e-13 Score=137.35 Aligned_cols=340 Identities=10% Similarity=-0.003 Sum_probs=192.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCC-CCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKE-YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~-Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...||+..|..-..-+.. +|.|.+++.+.+++.. ... ..+.....+|-+.+++..... -+.+.+ +++
T Consensus 53 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~------~~~v~f--~~s 122 (453)
T PRK06943 53 GRRYLDAISSWWVNLFGHA--NPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGT------LGHAFF--ASD 122 (453)
T ss_pred CCEEEEcchHHHHhcCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence 4578898877542233443 7889999988876421 011 112222334444444432111 257888 999
Q ss_pred chhHHHHHHHHHHHh-----CC-CCEEEEcCCCCcchHH-HhhhCC------------CCeeeeeeecCCC--CC-----
Q 012628 160 GTGSLRLAAALIERY-----FP-GAKVLISSPTWGNHKN-IFNDAR------------VPWSEYRYYDPKT--VG----- 213 (459)
Q Consensus 160 gt~a~~l~~~~~~~~-----~~-gd~Vlv~~p~y~~~~~-~~~~~G------------~~v~~v~~~~~~~--~~----- 213 (459)
|++|++.+.++.... .+ ..+|+...-+|.+... .+...| ..+..+|...... +.
T Consensus 123 GseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 202 (453)
T PRK06943 123 GASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAAD 202 (453)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHH
Confidence 999999998886443 12 3689999988876532 111111 0122333311100 00
Q ss_pred ---CCHHHHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH
Q 012628 214 ---LDFEGMIADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (459)
Q Consensus 214 ---~d~e~l~~~i~~~~~~~~~ii~~~-p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~ 288 (459)
-+++.+++.+...++....+|+.. .+...|. .++++-+++|.++|++||+++|.||+..+++-.+ ..+....
T Consensus 203 ~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG---~~fa~~~ 279 (453)
T PRK06943 203 VAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTG---TFFACEQ 279 (453)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCc---chhHHHh
Confidence 135677777765444566666555 3666676 4678889999999999999999999988886322 2333322
Q ss_pred HHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHH---HhhccccccCCchHHHHHHHHH---hCChhh
Q 012628 289 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KRLARPMYSNPPVHGARIVANV---VGNPAL 361 (459)
Q Consensus 289 ~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---L~~~~~ 361 (459)
.+..++++ .++|.++ .| +.+|.+++ .++..+.+...- ......++ +.+.++..++... ++++
T Consensus 280 -~gv~PDiv---t~gKgl~-gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~L~~i~~~-- 348 (453)
T PRK06943 280 -AGVWPDFL---CLSKGIS-GGYLPLSLVLS---RDAIFAAFYDDDVTRGFLHSHSY-TGNPLACRAALATLDLFAED-- 348 (453)
T ss_pred -CCCCCCeE---eeehhhc-cCcccceEEEE---cHHHHHhhcccCccCCccCCCCC-CCCHHHHHHHHHHHHHHHhc--
Confidence 23345655 4699998 78 58999866 777444332110 00122233 2334443444333 3222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeee--c-CCC------HHHHHHHHhcccEEEcCC
Q 012628 362 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSF--T-GLN------KAQSDNMTNKWHVYMTKD 431 (459)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~--~-~l~------~~~~~~ll~~~gI~v~~g 431 (459)
...++.+++-++|.+.|+ ++. .| .+..+.-.|-++.. . +-+ ..+...+++ +||.+.+.
T Consensus 349 ---------~l~~~~~~~G~~l~~~L~-~l~~~~-~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~-~Gll~~~~ 416 (453)
T PRK06943 349 ---------DVLARNARKSARLRAALA-PLAAHP-QVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALE-RELLLRPI 416 (453)
T ss_pred ---------CHHHHHHHHHHHHHHHHH-HHhcCC-CEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHH-CCcEEEec
Confidence 233445555566666665 441 11 12223333333211 1 111 123455555 69999886
Q ss_pred C---cEE--EccCChhhHHHHHHHHHHHHhhc
Q 012628 432 G---RIS--LAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 432 g---Ris--~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
| ||+ +.. +++++++++++|.++++++
T Consensus 417 g~~l~~~Ppl~i-t~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 417 GTTVYLMPPYVL-DDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CCEEEEeCCCcC-CHHHHHHHHHHHHHHHHHH
Confidence 5 676 333 9999999999999998764
No 307
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.64 E-value=1.8e-13 Score=136.90 Aligned_cols=342 Identities=9% Similarity=0.021 Sum_probs=188.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCC--CCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-...++. +|.|.+++.+.+++..... +....-..++.+.+++.... .-+.+.+ +++
T Consensus 42 G~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~------~~~~v~f--~~S 111 (428)
T PRK07986 42 GRRLVDGMSSWWAAIHGYN--HPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQ------PLECVFL--ADS 111 (428)
T ss_pred CCEEEEcchhHHhhcCCCC--CHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCC------CcCEEEE--eCC
Confidence 4578898887542233443 6889999988886521111 11222223344444443211 1257888 999
Q ss_pred chhHHHHHHHHHHHh-----CCCCEEEEcCCCCcchHHHhh-hCCC-------------CeeeeeeecCC---CC-CCCH
Q 012628 160 GTGSLRLAAALIERY-----FPGAKVLISSPTWGNHKNIFN-DARV-------------PWSEYRYYDPK---TV-GLDF 216 (459)
Q Consensus 160 gt~a~~l~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~-~~G~-------------~v~~v~~~~~~---~~-~~d~ 216 (459)
|++|++.+.++...+ ....+|+....+|.+...... ..+- .+..+|..... .+ .-|+
T Consensus 112 GsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~ 191 (428)
T PRK07986 112 GSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDI 191 (428)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHH
Confidence 999999998887765 234689999998876432211 1110 11222221000 00 1256
Q ss_pred HHHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC
Q 012628 217 EGMIADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (459)
Q Consensus 217 e~l~~~i~~~~~~~~~ii~~~-p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~ 294 (459)
+.+++.++..+++...+++.. ++.-.|. .++++.+++|.++|++||+++|+||++.+++..+ ..+.... .+..+
T Consensus 192 ~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG---~~fa~~~-~gv~P 267 (428)
T PRK07986 192 APFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTG---KLFACEH-AGIAP 267 (428)
T ss_pred HHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC---Ceeeecc-cCCCC
Confidence 778888865444555555544 2555565 4567889999999999999999999987764321 1111111 12223
Q ss_pred eEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHH-h-hccccccCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q 012628 295 ELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK-R-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 371 (459)
Q Consensus 295 ~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~ 371 (459)
+++ .++|.++ .| +.+|.+++ +++..+.+..... . ....++. .+.++..++...|+- . ++ +.
T Consensus 268 Di~---t~gK~l~-gG~~p~~av~~---~~~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~L~~---i---~~--~~ 331 (428)
T PRK07986 268 DIL---CLGKALT-GGTMTLSATLT---TREVAETISNGEAGCFMHGPTFM-GNPLACAVANASLSL---L---ES--GD 331 (428)
T ss_pred CEE---Eechhhh-CCcccCcchhc---hHHHHHHhhcCCCCccccCCCCC-cCHHHHHHHHHHHHH---H---Hh--CC
Confidence 444 5899998 67 57887755 7774444432100 0 1122332 333333344333221 0 00 12
Q ss_pred HHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeeecCC----CH-HHHHHHHhcccEEEcCCC---cEEEc-cCCh
Q 012628 372 MAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG---RISLA-GLSL 441 (459)
Q Consensus 372 ~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~~~l----~~-~~~~~ll~~~gI~v~~gg---Ris~~-~~~~ 441 (459)
..++.+++-+++.+.|+ ++. .| .+..+.-. |.++-+.+ .. .+.+.+++ +||.+.+.| |+.-. ..++
T Consensus 332 ~~~~~~~~g~~l~~~l~-~l~~~~-~i~~vRg~-Gl~~~ve~~~~~~~~~~~~~l~~-~Gl~~~~~g~~i~~~Ppl~it~ 407 (428)
T PRK07986 332 WQQQVAAIEAQLREELA-PLRDAP-MVADVRVL-GAIGVVETTRPVNMAALQRFFVE-QGVWIRPFGKLIYLMPPYIILP 407 (428)
T ss_pred HHHHHHHHHHHHHHHHH-HHhcCC-CEEeEecc-ceEEEEEeCCcccHHHHHHHHHH-CCcEEEecCCEEEEeCCCCCCH
Confidence 34555556666666666 541 11 01112222 33322211 12 33455555 699999877 56422 2399
Q ss_pred hhHHHHHHHHHHHHhh
Q 012628 442 AKCEYLADAIIDSYHN 457 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~ 457 (459)
+++++++++|.+++++
T Consensus 408 ~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 408 EQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999864
No 308
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.64 E-value=6.6e-13 Score=133.03 Aligned_cols=342 Identities=11% Similarity=0.040 Sum_probs=192.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC--CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-..-+.. .|.|.+++.+.+++... ..+.......+|.+.+++..... -+.+.+ +++
T Consensus 43 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~s 112 (429)
T PRK06173 43 GRRLIDGMSSWWAALHGYN--HPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPS------LNKIFF--ADS 112 (429)
T ss_pred CCEEEEccchHHhccCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC------cCEEEE--eCC
Confidence 4567888777532222443 68899988888764210 11123333445555555543211 357888 999
Q ss_pred chhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHH-hhhCC-------------CCeeeeeeecCCCCC-----C
Q 012628 160 GTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNI-FNDAR-------------VPWSEYRYYDPKTVG-----L 214 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~-~~~~G-------------~~v~~v~~~~~~~~~-----~ 214 (459)
|++|++.+.++...+. + ..+|+....+|.+.... +...| ..+..+|.... .+. -
T Consensus 113 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ 191 (429)
T PRK06173 113 GSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFGEEWNDE 191 (429)
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc-ccchhHHHH
Confidence 9999999988877652 3 35788999888764211 11111 01222332100 010 1
Q ss_pred CHHHHHHHHHcCCCCcEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012628 215 DFEGMIADIKAAPGGSFILLHGCA-HNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (459)
Q Consensus 215 d~e~l~~~i~~~~~~~~~ii~~~p-~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (459)
+++.+++.+...+++...+|+... +.-.|.. ++++-+++|.++|++||+++|+||++.+++..+ ..+.... .+.
T Consensus 192 ~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG---~~~a~~~-~gv 267 (429)
T PRK06173 192 AIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTG---KLFALEH-AGV 267 (429)
T ss_pred HHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCC---cchHHHh-cCC
Confidence 466677777644445666666553 6666766 788889999999999999999999987764322 2222222 222
Q ss_pred CCeEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHH--hhccccccCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012628 293 GMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLK--RLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 369 (459)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~ 369 (459)
.++++ +|+|.++ .|+ .++.+++ +++..+.+..... .....++. .+.++..++...|+ +. ++
T Consensus 268 ~PDiv---~~gK~l~-gG~~p~~a~~~---~~~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~---~i---~~-- 331 (429)
T PRK06173 268 VPDIM---CIGKALT-GGYLTLSATIT---TEAIAQTICSGEAKCFMHGPTFM-ANPLACAIAAESIR---LL---LE-- 331 (429)
T ss_pred CCCEE---Eeehhhh-CCccccceEEe---cHHHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHH---HH---Hh--
Confidence 34434 3899997 673 6777755 7774444322100 01112222 23333333333321 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc-CCCCCcccccCCccee-eecCC--CH-HHHHHHHhcccEEEcCCC---cEEEcc-CC
Q 012628 370 EMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMF-SFTGL--NK-AQSDNMTNKWHVYMTKDG---RISLAG-LS 440 (459)
Q Consensus 370 ~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~g~f-~~~~l--~~-~~~~~ll~~~gI~v~~gg---Ris~~~-~~ 440 (459)
+...++.+++-++|.+.|+ ++ +.|. +..+...|-+. +.++- .. ...+.|++ +||.+.+.| ||.-.- ++
T Consensus 332 ~~~~~~~~~~g~~l~~~L~-~~~~~~~-v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e-~Gi~v~~~g~~l~~~Ppl~it 408 (429)
T PRK06173 332 SPWQQNIQRIEAQLKQELA-PAAEFDS-VAEVRVLGAIGVVEMKEPVNMATLQPRFVE-HGIWVRPFGKLVYIMPPFIIS 408 (429)
T ss_pred CCHHHHHHHHHHHHHHHHH-HhhcCCC-eeeeeccceEEEEEeCCcccHHHHHHHHHH-CCeEEEecCCEEEEeCCccCC
Confidence 1235566666677777776 54 2110 11122233222 11221 22 34555555 599998876 775432 38
Q ss_pred hhhHHHHHHHHHHHHhh
Q 012628 441 LAKCEYLADAIIDSYHN 457 (459)
Q Consensus 441 ~e~i~~~~~~l~~~~~~ 457 (459)
++++++++++|.+++.+
T Consensus 409 ~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 409 PDELSQLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999875
No 309
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.63 E-value=2.7e-13 Score=136.45 Aligned_cols=343 Identities=12% Similarity=0.066 Sum_probs=191.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCC-CCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY-LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y-~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-...++. .|.|.+++++.+++.. ...+ .+..-..++.+.+++..... -+.+.+ +++
T Consensus 45 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~------~~~v~f--~~s 114 (442)
T PRK13360 45 GRRVLDGTAGLWCVNAGHG--RPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGG------LNHVFF--TNS 114 (442)
T ss_pred CCEEEECchhHHHhccCCC--CHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence 3578888877542222443 7889999988876421 0111 01222234444444443111 257888 999
Q ss_pred chhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHH-hhhCC------------CCeeeeeeecC-C--CCCC---
Q 012628 160 GTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYDP-K--TVGL--- 214 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~-~~~~G------------~~v~~v~~~~~-~--~~~~--- 214 (459)
|++|++.+.++...+. + ..+|+....+|.+.... +...| ..+..+|.... . .+..
T Consensus 115 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 194 (442)
T PRK13360 115 GSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQP 194 (442)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChH
Confidence 9999999988877652 2 35899999888765321 11111 11223333100 0 0111
Q ss_pred -----CHHHHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012628 215 -----DFEGMIADIKAA-PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (459)
Q Consensus 215 -----d~e~l~~~i~~~-~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~ 287 (459)
.++.+++.+... +++..++++...+...|.. .+++-+++|.++|++||+++|+||++.+++-.+ ..+...
T Consensus 195 ~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG---~~~a~~ 271 (442)
T PRK13360 195 EHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG---APFAAQ 271 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchhhh
Confidence 145777777632 2355666666666666766 567779999999999999999999987875322 122222
Q ss_pred HHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHH----hhccccccCCchHHHHHHHHHhCChhhH
Q 012628 288 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK----RLARPMYSNPPVHGARIVANVVGNPALF 362 (459)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 362 (459)
. .+..++++ +|+|.++ .| +.+|.+++ +++..+.+...-. .....++ +.+.++..++...|+ ..
T Consensus 272 ~-~gv~PDiv---t~gK~l~-gG~~P~gav~~---~~~i~~~~~~~~~~~~~~~~~~T~-~g~pl~~aaa~a~L~---~l 339 (442)
T PRK13360 272 Y-FGVTPDLL---TCAKGLT-NGAIPMGAVFV---SSEIHDAFMQGPEAGIEFFHGYTY-SGHPLACAAALATLD---LY 339 (442)
T ss_pred h-cCCCCcee---eeeeccc-cCccceEEEEE---cHHHHHHhhcCCccccccccCCCC-CCCHHHHHHHHHHHH---HH
Confidence 2 22233433 7899998 56 67899765 7774444332100 0112233 233333333333331 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceee---ecCC----C---HHHHHHHHhcccEEEcCC
Q 012628 363 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFS---FTGL----N---KAQSDNMTNKWHVYMTKD 431 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~---~~~l----~---~~~~~~ll~~~gI~v~~g 431 (459)
++ +...++.+++-+++.+.|+ ++. .|. +..+.-. |++. +... . .+...++++ +||.+.++
T Consensus 340 ---~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~-v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l~~-~Gvl~~~~ 410 (442)
T PRK13360 340 ---ER--EGLLTRAARLAPYWEDALH-SLRDAPH-VIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKCFE-KGLMIRYT 410 (442)
T ss_pred ---Hh--CCHHHHHHHHHHHHHHHHH-HhhcCCC-eeeeecc-ceEEEEEEecCCCCcchhHHHHHHHHHH-CCcEEEec
Confidence 00 1344555666666667776 542 110 1111112 2221 1111 1 134556665 59999877
Q ss_pred C---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 432 G---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 432 g---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
| ||+... .++++|++++++|.++++++
T Consensus 411 ~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 411 GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 6 777432 28999999999999999865
No 310
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.63 E-value=4.2e-13 Score=130.10 Aligned_cols=278 Identities=16% Similarity=0.130 Sum_probs=179.9
Q ss_pred CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH----hhhCCCC
Q 012628 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI----FNDARVP 200 (459)
Q Consensus 125 ~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~----~~~~G~~ 200 (459)
......|.++++.+-.+ ++.+. +++|..|+..+ ++..+.+||+|++++..|.+-... ++..|++
T Consensus 62 nPT~~~lE~~~a~LEg~--------~~~~a--fsSGmaAI~~~--~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~ 129 (396)
T COG0626 62 NPTRDALEEALAELEGG--------EDAFA--FSSGMAAISTA--LLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVE 129 (396)
T ss_pred CccHHHHHHHHHHhhCC--------CcEEE--ecCcHHHHHHH--HHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeE
Confidence 34556788888888422 44555 79999999998 666688999999999988765444 4567888
Q ss_pred eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012628 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (459)
Q Consensus 201 v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~ 280 (459)
+.+++. -|.+.+++++.+ +++++|++-+|.|||-.+ .++.+|+++|+++|+++++|+.|....+-.
T Consensus 130 ~~~~d~-------~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-- 195 (396)
T COG0626 130 VTFVDP-------GDDEALEAAIKE--PNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQR-- 195 (396)
T ss_pred EEEECC-------CChHHHHHHhcc--cCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccccC--
Confidence 877754 144667777763 379999999999999999 889999999999999999999987755421
Q ss_pred CChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChh
Q 012628 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 360 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 360 (459)
++ ..+.+|++.|.+|.++-.+-=+|.++ ++++++..+.+...... ..........+..+..-|+
T Consensus 196 ----PL-----~~GaDIVvhSaTKyl~GHsDvl~G~v-~~~~~~~~~~~~~~~~~---~~G~~l~p~dA~l~lRGlk--- 259 (396)
T COG0626 196 ----PL-----ELGADIVVHSATKYLGGHSDVLGGVV-LTPNEELYELLFFAQRA---NTGAVLSPFDAWLLLRGLR--- 259 (396)
T ss_pred ----hh-----hcCCCEEEEeccccccCCcceeeeEE-ecChHHHHHHHHHHHHh---hcCCCCCHHHHHHHHhccc---
Confidence 11 12367999999999986665566642 34555534333222221 1111233333333332222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc-cccC-----------------CcceeeecCCCHHHHHHHHh
Q 012628 361 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-FILR-----------------QIGMFSFTGLNKAQSDNMTN 422 (459)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~~~-----------------~~g~f~~~~l~~~~~~~ll~ 422 (459)
.+.-+.++..++...+.+.|+ +.+. ++ ++.| -||+|.|.=-+.+.+.++++
T Consensus 260 -------TL~~Rm~~~~~nA~~IA~~L~-~~p~---V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~ 328 (396)
T COG0626 260 -------TLALRMERHNENALKIAEFLA-DHPK---VKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLD 328 (396)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHh-cCCC---eEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHH
Confidence 244556666777788888887 5431 11 1111 46677664112144555554
Q ss_pred cccE---EEcCC-------------------------C------cEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 423 KWHV---YMTKD-------------------------G------RISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 423 ~~gI---~v~~g-------------------------g------Ris~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
.-.+ ...-| | |+|++- |+++.+++-|+++++.+
T Consensus 329 ~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 329 SLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA 395 (396)
T ss_pred hCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence 4333 22222 1 999976 77888888888888765
No 311
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.63 E-value=3.3e-13 Score=132.79 Aligned_cols=213 Identities=13% Similarity=0.121 Sum_probs=137.3
Q ss_pred CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcch----HHHhhhCCCC
Q 012628 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH----KNIFNDARVP 200 (459)
Q Consensus 125 ~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~----~~~~~~~G~~ 200 (459)
.....+|.+.++++... +..+. +++|+.|+.++ +.+.+.+||+|+++.+.|... ...+...|++
T Consensus 63 ~P~~~~lE~~la~leg~--------~~av~--~sSG~aAi~~a--l~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~ 130 (384)
T PRK06434 63 NPTVQAFEEKYAVLENA--------EHALS--FSSGMGAITSA--ILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIH 130 (384)
T ss_pred ChhHHHHHHHHHHHhCC--------CcEEE--eCCHHHHHHHH--HHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcE
Confidence 44567888889988643 34555 79999999998 555688999999998766543 3556678999
Q ss_pred eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012628 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (459)
Q Consensus 201 v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~ 280 (459)
++.++.++.+++. ++. ++++++++..|.|||+.+ .++++|+++|++++ +++|.++......
T Consensus 131 v~fvd~~~~~~~~---------l~~--~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~~~--- 191 (384)
T PRK06434 131 VDYIDTDRLNSLD---------FDP--SNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPYNQ--- 191 (384)
T ss_pred EEEECCCChhhee---------ecC--CCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcccC---
Confidence 9999874322222 121 367888889999999988 78999999999998 4569996322211
Q ss_pred CChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChh
Q 012628 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPA 360 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 360 (459)
. ++ ...-++++.|.+|.++-+|--+|.++ ++.+++..+++...... .....+.+.+.++..-|+
T Consensus 192 -~--pl-----~~gaDivv~S~tK~i~G~~d~~gG~v-v~~~~~~~~~~~~~~~~----~G~~~~~~~A~l~~~gL~--- 255 (384)
T PRK06434 192 -N--PL-----DLGADVVIHSATKYISGHSDVVMGVA-GTNNKSIFNNLVERRKT----LGSNPDPIQAYLALRGLK--- 255 (384)
T ss_pred -C--ch-----hcCCCEEEeecccccCCCCCceEEEE-ecCcHHHHHHHHHHHHh----cCCCCCHHHHHHHHhCCC---
Confidence 0 11 12357888999999975553356654 35666654444422111 111223332222222222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 361 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
.+..+.++.+++...+.+.|+ ..+
T Consensus 256 -------tL~~R~~r~~~~a~~~a~~L~-~~p 279 (384)
T PRK06434 256 -------TLGLRMEKHNKNGMELARFLR-DSK 279 (384)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHH-cCC
Confidence 245666677777778888887 653
No 312
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.63 E-value=1e-12 Score=132.99 Aligned_cols=342 Identities=9% Similarity=0.054 Sum_probs=192.8
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CC--CCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~--~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|+..|..-...++. +|.|.+++.+.+++.. .. .| ......+|.+.+++..... .+.+.+ ++
T Consensus 46 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~l~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~~ 114 (466)
T PRK07030 46 GKRYLDAVSSWWVNVFGHA--NPRINQRIKDQVDQLEHVILAGF-SHEPVIELSERLVKITPPG------LSRCFY--AD 114 (466)
T ss_pred CCEEEEcchhHHhhcCCCC--CHHHHHHHHHHHHhcCCcccccc-CCHHHHHHHHHHHHhCCCC------cCEEEE--eC
Confidence 3578888877542233443 6889999888876421 01 22 2223334555555442111 357888 99
Q ss_pred cchhHHHHHHHHHHHh----C-C-CCEEEEcCCCCcchHHHhhhC-CC------------CeeeeeeecCC--CCCC---
Q 012628 159 SGTGSLRLAAALIERY----F-P-GAKVLISSPTWGNHKNIFNDA-RV------------PWSEYRYYDPK--TVGL--- 214 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~----~-~-gd~Vlv~~p~y~~~~~~~~~~-G~------------~v~~v~~~~~~--~~~~--- 214 (459)
+|++|++.+.++...+ . + ..+|+...-+|.+........ |. .+..+|..... ..+.
T Consensus 115 sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~ 194 (466)
T PRK07030 115 NGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWE 194 (466)
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHH
Confidence 9999999998887654 1 2 367999998887653222211 11 12233321100 0011
Q ss_pred -----CHHHHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012628 215 -----DFEGMIADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (459)
Q Consensus 215 -----d~e~l~~~i~~~~~~~~~ii~~~-p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~ 287 (459)
+++.+++.+...++....+|+.. .+...|. .++++-+++|.++|++||+++|.||+..+++-.+ ..+...
T Consensus 195 ~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG---~~~a~~ 271 (466)
T PRK07030 195 EHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTG---TMFACE 271 (466)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccc---cchHHH
Confidence 25666777765444556666554 3555576 5677889999999999999999999988886321 223332
Q ss_pred HHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHH---h-hccccccCCchHHHHHHHHHhCChhhH
Q 012628 288 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVANVVGNPALF 362 (459)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~L~~~~~~ 362 (459)
. .+-.++++ .++|.++ .| +.+|.+++ +++..+.+..... . ....++ +.+.++..++...|+ +.
T Consensus 272 ~-~gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~h~~T~-~gnpla~aaa~a~L~---~i 339 (466)
T PRK07030 272 Q-AGIRPDFL---CLSKALT-GGYLPLAAVLT---TDTVYQAFYDDYPTLRAFLHSHSY-TGNPLACAAALATLD---IF 339 (466)
T ss_pred h-cCCCCCEE---eeehhcc-CCcccceEEEe---cHHHHHHHhcccccccccccCCCC-CCCHHHHHHHHHHHH---HH
Confidence 2 23345555 4699998 78 48999866 7774444422100 1 122333 333444444433332 10
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeeecCC------------C----HHHHHHHHhccc
Q 012628 363 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL------------N----KAQSDNMTNKWH 425 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~~~l------------~----~~~~~~ll~~~g 425 (459)
++ +...++.+++-++|.+.|+ ++. .|. +..+... |+++-+.+ + ..+.+++++ +|
T Consensus 340 ---~~--~~l~~~~~~~G~~l~~~L~-~l~~~~~-v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~G 410 (466)
T PRK07030 340 ---EQ--DNVIENNRALARRMAEATA-HLADHPH-VAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHALE-RG 410 (466)
T ss_pred ---Hh--cCHHHHHHHHHHHHHHHHH-HHhcCCC-EEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHHH-CC
Confidence 00 1334555556666666665 541 110 1112223 33322111 0 123445555 69
Q ss_pred EEEcCCC---cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 426 VYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 426 I~v~~gg---Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|.+.+.| |+..+ ..++++++++++++.++++++
T Consensus 411 vl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 411 ALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred eEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 9998865 55422 239999999999999999874
No 313
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=7e-13 Score=134.04 Aligned_cols=336 Identities=12% Similarity=0.043 Sum_probs=187.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC-CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+|+..+.+ ...+. -+|.|.+++.+.++.... ....+.....+|.+.+++..... .+.+.+ +++|
T Consensus 71 G~~ylD~~g~~~-~~lGh--~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~sG 139 (459)
T PRK06082 71 GKKYMDFHGNNV-HQLGY--GHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGE------LNRVLF--APGG 139 (459)
T ss_pred CCEEEEcccHhh-cccCC--CCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCC------CCEEEE--CCCc
Confidence 356788863322 22243 378899999888864210 11113333445555555553211 257888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH-HhhhCCC------------CeeeeeeecCCC--CC-C------CHHH
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKN-IFNDARV------------PWSEYRYYDPKT--VG-L------DFEG 218 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~-~~~~~G~------------~v~~v~~~~~~~--~~-~------d~e~ 218 (459)
++|++.+.++...+....+|+....+|.+... .+...|. .+..+|...... +. . +++.
T Consensus 140 seAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (459)
T PRK06082 140 TSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADY 219 (459)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHH
Confidence 99999998887766555889999988876532 2221111 122232210000 00 0 1345
Q ss_pred HHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEE
Q 012628 219 MIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLV 298 (459)
Q Consensus 219 l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~ 298 (459)
+++.+... +....+|+-...+..+..++++-+++|.++|++||+++|.||+..+++-.+ ..+.... .+..++++
T Consensus 220 l~~~i~~~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG---~~fa~e~-~gv~PDiv- 293 (459)
T PRK06082 220 LEYVIEKE-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG---EWFTHQA-YGIEPDIL- 293 (459)
T ss_pred HHHHHhcC-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---hhhHhHh-hCCCCCEE-
Confidence 67777642 345566666666655567888899999999999999999999988775321 2222222 23334544
Q ss_pred EEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHHh-hccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHH
Q 012628 299 AQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRI 376 (459)
Q Consensus 299 ~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 376 (459)
.++|.++ .| +.+|.+++ +++ +...... ....++ +.+.++..++...|+ .. ++ +...++.
T Consensus 294 --~~gKgl~-gG~~P~~av~~---~~~----i~~~~~~~~~~~T~-~gnpl~~aaa~a~L~---~l---~~--~~l~~~~ 354 (459)
T PRK06082 294 --CIGKGLG-GGLVPIAAMIT---KDK----YNTAAQISLGHYTH-EKSPLGCAAALATIE---VI---EQ--EGLLEKV 354 (459)
T ss_pred --Eeccccc-CCCCcceEEEE---cHH----HHhhccCCCCCCCC-CcCHHHHHHHHHHHH---HH---Hh--cCHHHHH
Confidence 3899999 67 48898865 666 2222111 111233 333333333333321 10 00 1234455
Q ss_pred HHHHHHHHHHHhhcc----CCCCCcccccCCcceeee--c-CC-----C----HHHHHHHHhcccEEEcCC-C---cEEE
Q 012628 377 KNVRQKLFDSLSAKD----KSGKDWSFILRQIGMFSF--T-GL-----N----KAQSDNMTNKWHVYMTKD-G---RISL 436 (459)
Q Consensus 377 ~~~~~~l~~~L~~~~----g~~~~~~~~~~~~g~f~~--~-~l-----~----~~~~~~ll~~~gI~v~~g-g---Ris~ 436 (459)
+++-++|.+.|+ ++ +. +..+...|.++.+ . +. + ..+...+++ +||.+.+. + |++.
T Consensus 355 ~~~g~~l~~~L~-~l~~~~~~---i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~~i~~~P 429 (459)
T PRK06082 355 KADSQFMRERLL-EMKAKYPL---IGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLN-NGLSFKVSQGNVIQLSP 429 (459)
T ss_pred HHHHHHHHHHHH-HHHhhCCC---eeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHh-CCCEEEecCCCEEEEeC
Confidence 555555555555 43 21 1122333333321 1 10 1 123445555 69998775 3 6653
Q ss_pred c-cCChhhHHHHHHHHHHHHhhc
Q 012628 437 A-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 437 ~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
. ..++++++++++++.+++.++
T Consensus 430 pl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 430 PLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred CCccCHHHHHHHHHHHHHHHHHH
Confidence 3 238999999999999988753
No 314
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.62 E-value=8.7e-14 Score=124.92 Aligned_cols=317 Identities=12% Similarity=0.055 Sum_probs=190.8
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcC--------CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEE
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--------ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (459)
.++++|....|+ +.. ..|+|.++.++++++. ...+| ..-...|...||++ .++ ++-|+
T Consensus 67 k~ilnFcaNnYL---GLs-shPeii~a~~~aleeyGaGlssvrfIcGt--q~iHk~LE~kiAqf-h~r------ED~il- 132 (417)
T KOG1359|consen 67 KKILNFCANNYL---GLS-SHPEIINAGQKALEEYGAGLSSVRFICGT--QDIHKLLESKIAQF-HGR------EDTIL- 132 (417)
T ss_pred cceeeecccccc---ccc-CChHHHHHHHHHHHHhCCCccceeEEecc--hHHHHHHHHHHHHH-hCC------CceEE-
Confidence 478899988874 333 2688888888887541 00112 12235677788888 333 34444
Q ss_pred eecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC-CCCcEEE
Q 012628 155 VQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFIL 233 (459)
Q Consensus 155 ~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~i 233 (459)
...+-.|+.-+ +.+.+.|.|.|+-.+-.+.....-++.+. +. ..+|+-.++..+.+. +-+-+++
T Consensus 133 --ypscfdANag~--feail~pedAvfSDeLNhASIIdGirLck-ry----------~h~dv~~l~~~l~~a~k~r~klv 197 (417)
T KOG1359|consen 133 --YPSCFDANAGA--FEAILTPEDAVFSDELNHASIIDGIRLCK-RY----------RHVDVFDLEHCLISACKMRLKLV 197 (417)
T ss_pred --eccccccchHH--HHHhcChhhhhhccccccchhhhhhHHHh-hh----------ccchhHHHHHHHHHhhhheEEEE
Confidence 45555555554 44457788888888777776666555553 11 124555555444331 1255677
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh-cCCeEEEEEcCCcCcc-cCCC
Q 012628 234 LHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLG-LYAE 311 (459)
Q Consensus 234 i~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~-~~G~ 311 (459)
+....-.-.|.+ .++++|.+++++||.++++||++..+.++. .......... .++.++...+++|.+| ..|
T Consensus 198 ~TDg~FSMDGdi---aPl~ei~~La~kYgaLlfiDecHaTgf~G~---tGrGt~E~~~vm~~vdiinsTLgKAlGga~G- 270 (417)
T KOG1359|consen 198 VTDGVFSMDGDI---APLEEISQLAKKYGALLFIDECHATGFFGE---TGRGTAEEFGVMGDVDIINSTLGKALGGASG- 270 (417)
T ss_pred EecceeccCCCc---ccHHHHHHHHHhcCcEEEEeecccceeecC---CCCChHHHhCCCCcceehhhhhhhhhcCCCC-
Confidence 766666777888 888899999999999999999977665542 1222223322 3456788899999997 444
Q ss_pred CcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012628 312 RIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLS 388 (459)
Q Consensus 312 RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 388 (459)
||..+ |..++..+.++-+.+..... -||.+...++ ..++.+ .+...+.+.+.+.+++.++
T Consensus 271 --Gyttg---p~~li~llrqr~RpylFSns-lppavV~~a~ka~dllm~s-----------~~~i~~~~a~~qrfr~~me 333 (417)
T KOG1359|consen 271 --GYTTG---PKPLISLLRQRSRPYLFSNS-LPPAVVGMAAKAYDLLMVS-----------SKEIQSRQANTQRFREFME 333 (417)
T ss_pred --CCccC---ChhHHHHHHhcCCceeecCC-CChhhhhhhHHHHHHHHhh-----------HHHHHHHHHHHHHHHHHHH
Confidence 88755 88855555544433322222 2333222222 111211 2334455556666777776
Q ss_pred hccCCCCCcccccCCccee-eecCC---CHHHHHHHHhcccEEEc-------CCC----cEEEccC-ChhhHHHHHHHHH
Q 012628 389 AKDKSGKDWSFILRQIGMF-SFTGL---NKAQSDNMTNKWHVYMT-------KDG----RISLAGL-SLAKCEYLADAII 452 (459)
Q Consensus 389 ~~~g~~~~~~~~~~~~g~f-~~~~l---~~~~~~~ll~~~gI~v~-------~gg----Ris~~~~-~~e~i~~~~~~l~ 452 (459)
..| +.+......+. +.+|. .....++|++. ||+|. |-| |+.++.. ++|+|+++++++.
T Consensus 334 -~aG----ftIsg~~hPI~pv~lGda~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~ 407 (417)
T KOG1359|consen 334 -AAG----FTISGASHPICPVMLGDARLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFS 407 (417)
T ss_pred -hcC----ceecCCCCCccceecccHHHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHH
Confidence 666 34433222222 34443 34567889986 99863 334 6555543 9999999999999
Q ss_pred HHHhhc
Q 012628 453 DSYHNV 458 (459)
Q Consensus 453 ~~~~~~ 458 (459)
++.+.+
T Consensus 408 ~vgr~~ 413 (417)
T KOG1359|consen 408 EVGRFL 413 (417)
T ss_pred HHHHhh
Confidence 988754
No 315
>PRK05965 hypothetical protein; Provisional
Probab=99.62 E-value=1.4e-12 Score=131.91 Aligned_cols=340 Identities=11% Similarity=0.063 Sum_probs=192.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CC---CCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NK---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~---~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
+...||+..|..-..-+.. +|+|.+++.+.++... .. .+ +.....+|-+.+++..... -+.+.+ +
T Consensus 45 G~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~ 113 (459)
T PRK05965 45 GHQLLDAFAGLWCVNVGYG--QESIVEAAAEQMRELPYATGYFHF-GSEPAIRLAAKLAERAPGS------LNHVYF--T 113 (459)
T ss_pred CCEEEECcccHHhccCCCC--CHHHHHHHHHHHHhcCCccccccc-CCHHHHHHHHHHHhhCCCC------cCEEEE--e
Confidence 3578898877542233443 7889999988886421 01 11 1222234555555442111 357888 9
Q ss_pred ccchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHh-hh---------CCC---CeeeeeeecC--CCCCCC-
Q 012628 158 LSGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIF-ND---------ARV---PWSEYRYYDP--KTVGLD- 215 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~~-~~---------~G~---~v~~v~~~~~--~~~~~d- 215 (459)
++|++|++.+.++.+.+. + ..+|+....+|.+..... .. .|. .+..+|.... ..+.-|
T Consensus 114 ~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (459)
T PRK05965 114 LGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP 193 (459)
T ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh
Confidence 999999999988876651 2 367999999987653211 11 110 1122322100 001123
Q ss_pred -------HHHHHHHHHcCC-CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012628 216 -------FEGMIADIKAAP-GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (459)
Q Consensus 216 -------~e~l~~~i~~~~-~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~ 286 (459)
++.+++.+.... +....+|+...+...|.+ ++++-+++|.++|++||+++|.||+..+|+-.+ ..+..
T Consensus 194 ~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG---~~~a~ 270 (459)
T PRK05965 194 QAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTG---PLFAC 270 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCc---hhhhH
Confidence 256777776422 345666666666667764 677889999999999999999999998886322 22333
Q ss_pred HHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHH----hhccccccCCchHHHHHHHHH---hCC
Q 012628 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK----RLARPMYSNPPVHGARIVANV---VGN 358 (459)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---L~~ 358 (459)
.. .+..++++ .++|.++ .| +.+|.+++ +++..+.+..... .....++ +.+.++..++... +++
T Consensus 271 ~~-~gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~Aaa~a~L~~l~~ 341 (459)
T PRK05965 271 EA-EGVVPDLM---TVAKGLT-SGYVPMGAVLM---SDHVYQGIADGAGAAAPVGHGYTY-SAHPVSAAVGLEVLRLYHE 341 (459)
T ss_pred hh-cCCCCCeE---Eechhhc-cCCcceeEEEE---cHHHHHHHhccccccccccccCCC-CCCHHHHHHHHHHHHHHHh
Confidence 22 23345555 5799998 78 48999876 7775444432100 0122233 3333443343333 322
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeee--c-CC------C------HHHHHHHHh
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSF--T-GL------N------KAQSDNMTN 422 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~--~-~l------~------~~~~~~ll~ 422 (459)
+ ...++.++.-++|.+.|+ ++. .| .+..+...|-++.. . +- + ..+...+++
T Consensus 342 ~-----------~l~~~~~~~g~~l~~~l~-~l~~~~-~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~ 408 (459)
T PRK05965 342 G-----------GLLANGQKAGPRFAAGLD-ALRAHP-LVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYA 408 (459)
T ss_pred c-----------cHHHHHHHHHHHHHHHHH-hhccCC-CEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHh
Confidence 2 334555666666666666 541 11 01112223222211 1 10 0 123445555
Q ss_pred cccEEEcCCC--cEEEc---cCChhhHHHHHHHHHHHHhhc
Q 012628 423 KWHVYMTKDG--RISLA---GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 423 ~~gI~v~~gg--Ris~~---~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+||.+.+.| -|.+. ..+++++++++++|.++++++
T Consensus 409 -~Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 409 -NGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred -CCeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 699998865 23333 238999999999999998764
No 316
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.62 E-value=8.5e-13 Score=133.00 Aligned_cols=342 Identities=12% Similarity=0.039 Sum_probs=191.7
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-C--CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~--~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|+..|..-..-|+. +|.|.+++.+.+++.. . ..+ ......++.+.+++..... .+.+.+ ++
T Consensus 48 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~l~~~~~~~~-~~~~~~~la~~L~~~~p~~------~~~v~f--~~ 116 (445)
T PRK09221 48 GRKILDGTAGLWCCNAGHG--RPEIVEAVARQAATLDYAPAFQM-GHPLAFELAERLAELAPGG------LDHVFF--TN 116 (445)
T ss_pred CCEEEEccccHhhccCCCC--CHHHHHHHHHHHHhccCcccccc-CCHHHHHHHHHHHHhCCCC------CCEEEE--eC
Confidence 3578898877542223443 7889889888875421 0 111 1222234444444442111 257888 99
Q ss_pred cchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHhhh-CC------------CCeeeeeeec-CC--CCCC--
Q 012628 159 SGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYD-PK--TVGL-- 214 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~~~~-~G------------~~v~~v~~~~-~~--~~~~-- 214 (459)
+|++|++.+.++...+. + ..+|+....+|.+....... .| ..+..+|... .. .+..
T Consensus 117 sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (445)
T PRK09221 117 SGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQ 196 (445)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCCh
Confidence 99999999988877652 1 35799999888765322111 11 1122333210 00 0111
Q ss_pred ------CHHHHHHHHHcCC-CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012628 215 ------DFEGMIADIKAAP-GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (459)
Q Consensus 215 ------d~e~l~~~i~~~~-~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~ 286 (459)
..+.+++.+...+ ++...+++.......|.. .+++-+++|.++|++||+++|+||++.+++-.+ ..+..
T Consensus 197 ~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG---~~~~~ 273 (445)
T PRK09221 197 PEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLG---AAFAA 273 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCc---hhhHH
Confidence 1356677776432 355666666667777875 466779999999999999999999987775321 12222
Q ss_pred HHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHH----HhhccccccCCchHHHHHHHHHhCChhh
Q 012628 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL----KRLARPMYSNPPVHGARIVANVVGNPAL 361 (459)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 361 (459)
.. .+..++++ +++|.++ .| +.+|.+.+ +++..+.+.... ......++ +.+.++..++...|+ .
T Consensus 274 ~~-~gv~PDi~---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~~~~T~-~~~pl~~aaa~a~L~---~ 341 (445)
T PRK09221 274 ER-FGVTPDII---TFAKGLT-NGAIPMGAVIA---SDEIYDAFMQGPEYAIEFFHGYTY-SAHPVACAAGLATLD---I 341 (445)
T ss_pred Hh-cCCCCCEE---Eeccccc-cCcccceeeEE---cHHHHHhhccCcccccccccccCC-CcCHHHHHHHHHHHH---H
Confidence 22 22233433 7899997 55 67888755 777444443210 00112233 334444333333332 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCcccccCCcceeeecCC------C----HHHHHHHHhcccEEEcC
Q 012628 362 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKD-KSGKDWSFILRQIGMFSFTGL------N----KAQSDNMTNKWHVYMTK 430 (459)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~g~f~~~~l------~----~~~~~~ll~~~gI~v~~ 430 (459)
. ++ +...++.+++.+++.+.|+ ++ +.|. +..+... |.+.-+.+ + .+..+.+++ +||.+.+
T Consensus 342 i---~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~-v~~vrg~-Gl~~~v~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~ 412 (445)
T PRK09221 342 Y---RE--EDLFERAAELAPYFEDAVH-SLKGLPH-VIDIRNI-GLVAGIELAPRPGAPGARGYEAFMKCFE-KGLLVRY 412 (445)
T ss_pred H---Hh--ccHHHHHHHHHHHHHHHHH-hhccCCC-EEEEecC-ceEEEEEEecccccccchHHHHHHHHHH-CCeEEee
Confidence 0 11 1345666777777777777 65 2110 1112222 22221111 1 134556655 5999988
Q ss_pred CC---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 431 DG---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 431 gg---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
+| ||+..- .++++|++++++|.++++++
T Consensus 413 ~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 413 TGDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred cCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 76 776432 38999999999999999876
No 317
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.62 E-value=3.9e-13 Score=134.59 Aligned_cols=333 Identities=15% Similarity=0.095 Sum_probs=192.1
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCC-----CcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
.+||.+.-.++++.+.+++++.+.+++.+++.......|.- ..-+..+++.++++.... . .++ ++
T Consensus 75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae-------~-alv--v~ 144 (454)
T TIGR00474 75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE-------D-ALV--VN 144 (454)
T ss_pred ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC-------c-EEE--EC
Confidence 56776544566666777779999999998885422122211 122478889999997542 2 344 57
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcc------hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEE
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGN------HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~------~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ 232 (459)
+++.|+.++ + ..+.+||+|++++..|.. +...++..|++++.++.+ ...|++++++++++ +|++
T Consensus 145 sg~aAi~l~--l-~~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~----~~~~l~dle~aI~~---~T~l 214 (454)
T TIGR00474 145 NNAAAVLLA--L-NTLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT----NRTHLKDYEDAITE---NTAL 214 (454)
T ss_pred CHHHHHHHH--H-HHhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC----CCCCHHHHHHhcCc---CCEE
Confidence 888888876 3 457899999999866432 234567789999988763 13588999999976 7888
Q ss_pred EEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCC---CCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 233 LLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG---SLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 233 ii~~~p~NPT--G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
+++.+++|++ |.. ...++++|+++|++||+++++|.+...+... +.. ..+.+.. ....+.+++++|.+|.++
T Consensus 215 v~~~h~sN~~~~G~~-~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~-~~p~~~~-~~~~GaDiv~fSg~K~Lg 291 (454)
T TIGR00474 215 LLKVHTSNYRIVGFT-EEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLP-DEPTVQE-VIAAGVDLVTFSGDKLLG 291 (454)
T ss_pred EEEEccCcccccCCC-CCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCC-CCccccc-HhHcCCCEEEecCccccC
Confidence 8889999996 531 1257889999999999999999863322110 000 0011111 112345689999999986
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHH--HHHHHHHhCChhhHHHHH-----HHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHG--ARIVANVVGNPALFDEWK-----AEMEMMAGRIKNVR 380 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~ 380 (459)
-| ..|++++ .++.++++.... +.+.....--.++ ......+++ +. +.|. +-+....++.+++.
T Consensus 292 Gp--~~G~i~g---~~~~i~~l~~~~--l~r~lr~~k~~la~l~~~l~~~~~-~~--~a~~~~~~l~~l~~~~~~~~~~A 361 (454)
T TIGR00474 292 GP--QAGIIVG---KKELIERLKKNP--LTRALRVDKLTLAALEATLRLYLD-PE--KALEKIPTLRMLTQSPEELRARA 361 (454)
T ss_pred CC--eEEEEEE---CHHHHHhhhhch--hHHHHhhChHHHHHHHHHHHHHhC-ch--hhhhhchHHHHhccCHHHHHHHH
Confidence 45 3688765 666554432210 0000000001111 111111222 11 1111 22334455666677
Q ss_pred HHHHHHHhhcc-CCCC-CcccccCC----cc---------eeeec---CCCHHHHHHHHhccc--EEEcC-CC--cEEEc
Q 012628 381 QKLFDSLSAKD-KSGK-DWSFILRQ----IG---------MFSFT---GLNKAQSDNMTNKWH--VYMTK-DG--RISLA 437 (459)
Q Consensus 381 ~~l~~~L~~~~-g~~~-~~~~~~~~----~g---------~f~~~---~l~~~~~~~ll~~~g--I~v~~-gg--Ris~~ 437 (459)
+.+.+.|+ +. + ++ ..++.... || +-+-+ +++.+.+++.+++.. |..+- .| .+.+.
T Consensus 362 ~~la~~L~-~~~~-~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~~~~~~~ld~r 439 (454)
T TIGR00474 362 ERLAKRLK-AALG-PGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGRIEDDRFLLDLR 439 (454)
T ss_pred HHHHHHHH-hhcc-CCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEEEECCEEEEEeC
Confidence 77888887 53 1 11 01222211 11 11112 345666666666655 33322 23 34566
Q ss_pred cCChhhHHHHHHHH
Q 012628 438 GLSLAKCEYLADAI 451 (459)
Q Consensus 438 ~~~~e~i~~~~~~l 451 (459)
++.++|++.++++|
T Consensus 440 ~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 440 TLLEDEEELLIEAL 453 (454)
T ss_pred cCCHHHHHHHHHHh
Confidence 77788888888876
No 318
>PRK07481 hypothetical protein; Provisional
Probab=99.62 E-value=9.3e-13 Score=132.99 Aligned_cols=342 Identities=14% Similarity=0.097 Sum_probs=188.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCC-CC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK-EY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|+..|..-..-+.. .|.|.+++.+.++..... .+ .+.....++.+.+++.+... .-+.+.+ ++
T Consensus 41 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~-----~~~~v~f--~~ 111 (449)
T PRK07481 41 GKKLLDGVGGLWNVNVGHN--REEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPE-----GMRRVFF--SS 111 (449)
T ss_pred CCEEEECchhHHhhcCCCC--CHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCC-----CCCEEEE--cC
Confidence 4567888777542233443 688999998887652211 11 12323334445555443100 1357888 99
Q ss_pred cchhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHhhhC-C------------CCeeeeeeecCC--CCC-CCH
Q 012628 159 SGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFNDA-R------------VPWSEYRYYDPK--TVG-LDF 216 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~~~-G------------~~v~~v~~~~~~--~~~-~d~ 216 (459)
+|++|++.+.++.+.+. +| .+|+...-+|.+........ | ..+..++..... .+. .|+
T Consensus 112 sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~ 191 (449)
T PRK07481 112 GGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDP 191 (449)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCH
Confidence 99999999988877652 23 57999998887653321111 1 112222221000 011 134
Q ss_pred HHH--------HHHHH-cCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012628 217 EGM--------IADIK-AAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (459)
Q Consensus 217 e~l--------~~~i~-~~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~ 286 (459)
+.+ ++.+. ..++....+|+...+.-.|.+ ++++-+++|.++|++||+++|.||+..+++-.+ ..+..
T Consensus 192 ~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~a~ 268 (449)
T PRK07481 192 EELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG---SWFGS 268 (449)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc---hhhHh
Confidence 443 33343 223456666666666666764 577779999999999999999999988886321 12222
Q ss_pred HHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHH---h-hccccccCCchHHHHHHHHHh---CC
Q 012628 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVANVV---GN 358 (459)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~L---~~ 358 (459)
.. .+..++++ .++|.++ .| +.+|.+++ +++..+.+..... . ....++ +.+.++..++...| ++
T Consensus 269 ~~-~gv~PDiv---~~gKgl~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~aaa~a~L~~l~~ 339 (449)
T PRK07481 269 RG-WGVKPDIM---CLAKGIT-SGYVPLGATMV---NARIADAFEANADFGGAIMHGYTY-SGHPVACAAALATLDIVVR 339 (449)
T ss_pred hh-cCCCCCEE---EEeeccc-CCCcCceEEEE---cHHHHHHHhccCccccccccCCCC-CCCHHHHHHHHHHHHHHHh
Confidence 22 23334555 5699998 67 58999866 7774444322100 0 122233 33344434443333 22
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCcccccCCcceeee--c-CC------C--H----HHHHHHH
Q 012628 359 PALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSF--T-GL------N--K----AQSDNMT 421 (459)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~~--~-~l------~--~----~~~~~ll 421 (459)
+ ...++.++.-++|.+.|+ ++- .|. +..+...|-++.. . +- + . .+.+.++
T Consensus 340 ~-----------~l~~~~~~~g~~l~~~L~-~l~~~~~~-i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (449)
T PRK07481 340 E-----------DLPANAAKRGAYLLEGLQ-PLKERFEL-VGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAR 406 (449)
T ss_pred h-----------hHHHHHHHHHHHHHHHHH-HHhhcCCC-eEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHH
Confidence 2 234445555555655555 431 100 1122233333211 1 10 1 1 2234555
Q ss_pred hcccEEEcCCC---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 422 NKWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 422 ~~~gI~v~~gg---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
+ +||.+.+.| ||+-.. .+++++++++++|.++++++
T Consensus 407 ~-~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 407 E-NGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred h-CCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5 699998876 666332 38999999999999999875
No 319
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.62 E-value=7.5e-13 Score=134.86 Aligned_cols=346 Identities=15% Similarity=0.084 Sum_probs=188.7
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCC-cccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...||+..|..-...|.. +|.|.+++.+.+++.. + +... .+..+....+++.+..... +...+.+.+ +++|
T Consensus 88 G~~ylD~~sg~~~~~lGh~--hp~v~~Av~~ql~~~~-~-~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f--~~SG 160 (504)
T PLN02760 88 GKKYLDALAGLWCTALGGS--EPRLVAAATEQLNKLP-F-YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFF--TNSG 160 (504)
T ss_pred CCEEEEcCcCHHhcccCCC--CHHHHHHHHHHHhhcc-c-eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEE--eCCh
Confidence 4578999887542333443 7889999998886521 1 1111 1122333444444333211 011256888 9999
Q ss_pred hhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHH-hhhCCCC------------eeeeeeecCCCCC--------
Q 012628 161 TGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNI-FNDARVP------------WSEYRYYDPKTVG-------- 213 (459)
Q Consensus 161 t~a~~l~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~-~~~~G~~------------v~~v~~~~~~~~~-------- 213 (459)
++|++.+.++...+. ++ .+|+..+-+|.+..-. +...|.. +..++. +..+.
T Consensus 161 sEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~ 238 (504)
T PLN02760 161 SEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDC--PHYWRFHLPGETE 238 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCC--CcccccCCCCCcH
Confidence 999999988775431 22 6789988888765322 2212211 112221 11011
Q ss_pred -----CCHHHHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012628 214 -----LDFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (459)
Q Consensus 214 -----~d~e~l~~~i~~-~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~ 286 (459)
...+++++.+.. .++....+|+.....-.|.+ ++++-+++|.++|++||+++|+||++.+++--+ ..+..
T Consensus 239 ~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG---~~~a~ 315 (504)
T PLN02760 239 EEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLG---TMFGC 315 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccc---hhhHH
Confidence 012456666642 22345566666666666765 567789999999999999999999987885322 12232
Q ss_pred HHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHH---h-hccccccCCchHHHHHHHHHhCChhh
Q 012628 287 RLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---R-LARPMYSNPPVHGARIVANVVGNPAL 361 (459)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~L~~~~~ 361 (459)
.. .+-.+++ .+|+|.+| .| +.+|.+++ +++..+.+..... . ....+++ .+.++..++...|+ .
T Consensus 316 e~-~gv~PDi---vtlgK~lg-gG~~PigAv~~---~~~i~d~~~~~~~~~~~~~h~~T~~-gnPl~~Aaala~Le---~ 383 (504)
T PLN02760 316 DK-YNIKPDL---VSLAKALS-SAYMPIGAVLV---SPEISDVIHSQSNKLGSFAHGFTYS-GHPVSCAVALEALK---I 383 (504)
T ss_pred Hh-cCCCCcE---EEeccccc-CCccccceEee---cHHHHhhhhcccccccCcccCCCCC-CCHHHHHHHHHHHH---H
Confidence 22 2223454 37899998 56 48999766 7775444432100 1 1223333 33444444433332 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeee--cCC-------------CHHHHHHHHhcccE
Q 012628 362 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF--TGL-------------NKAQSDNMTNKWHV 426 (459)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~--~~l-------------~~~~~~~ll~~~gI 426 (459)
. ++ +...++.+++-++|.+.|+ ++.--+.+..+.-.|.++.+ ..- ...+.+.+++ +||
T Consensus 384 i---~~--~~l~~~~~~~g~~l~~~L~-~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gv 456 (504)
T PLN02760 384 Y---KE--RNIPEHVNKIAPRFQDGIK-AFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKK-RGM 456 (504)
T ss_pred H---Hh--CCHHHHHHHHHHHHHHHHH-HHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHh-CCc
Confidence 1 00 1334555555566666665 44100001112233333321 110 0123445555 699
Q ss_pred EEcCCC---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 427 YMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 427 ~v~~gg---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
.+.+.| ||+..- .++++|+++++++.++++++
T Consensus 457 l~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 457 LVRVAGDNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred EEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 998876 677431 29999999999999988754
No 320
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.62 E-value=8.2e-13 Score=132.61 Aligned_cols=343 Identities=9% Similarity=0.025 Sum_probs=190.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-...+.. +|.+.+++.+.+++.. ...+.+.....++-+.+++..... -+.+.+ +.+
T Consensus 44 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~------~~~v~f--~~s 113 (427)
T TIGR00508 44 GRRLIDGMSSWWAAIHGYN--HPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNA------LDCVFL--ADS 113 (427)
T ss_pred CCEEEEccchHHHhcCCCC--CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC------CCEEEE--eCC
Confidence 4578898877532222433 7889998888876421 111112333445555555553211 267888 999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHhh-hCCC-------------CeeeeeeecCCCCC-----C
Q 012628 160 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DARV-------------PWSEYRYYDPKTVG-----L 214 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~-~~G~-------------~v~~v~~~~~~~~~-----~ 214 (459)
|+++++.+.++..... +| .+|+...-+|.+....+- ..|- .+..+|.. ...+. -
T Consensus 114 GseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~ 192 (427)
T TIGR00508 114 GSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEE 192 (427)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHH
Confidence 9999999988766542 23 679999988876532222 1121 01112210 00011 1
Q ss_pred CHHHHHHHHHcCCCCcEEEEeCCC-CCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012628 215 DFEGMIADIKAAPGGSFILLHGCA-HNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (459)
Q Consensus 215 d~e~l~~~i~~~~~~~~~ii~~~p-~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (459)
|++++++.+...++....+++... ++-.|. .++.+.+++|.++|++||+++|+||++.+++..+ ..+.... .+.
T Consensus 193 ~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G---~~~~~~~-~~v 268 (427)
T TIGR00508 193 AITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTG---KLFACEH-AGV 268 (427)
T ss_pred HHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---ccchhhh-cCC
Confidence 466777777643334555555543 555565 4578999999999999999999999987765432 1222211 222
Q ss_pred CCeEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHH-h-hccccccCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012628 293 GMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLK-R-LARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 369 (459)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~ 369 (459)
.++++ .++|.++ .|+ .++.+++ +++..+.+..... . ....++. .+.++..++...|+ +. ++
T Consensus 269 ~pDi~---~~gK~l~-gG~~p~~a~~~---~~~~~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~---~l---~~-- 332 (427)
T TIGR00508 269 VPDIL---CVGKALT-GGYMTLSATVT---TDKVAQTISSGEAGCFMHGPTFM-GNPLACAVAEASLA---IL---LE-- 332 (427)
T ss_pred CCCEE---Eechhhh-cCcccceEEEE---cHHHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHH---HH---Hh--
Confidence 33433 3799997 674 5666644 7774444432100 0 1112222 23333333333322 10 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceee-ecC--CC-HHHHHHHHhcccEEEcCCC---cEEEcc-CCh
Q 012628 370 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFS-FTG--LN-KAQSDNMTNKWHVYMTKDG---RISLAG-LSL 441 (459)
Q Consensus 370 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~-~~~--l~-~~~~~~ll~~~gI~v~~gg---Ris~~~-~~~ 441 (459)
+...++.+++.++|.+.|+ +++....+..+...|.++. .++ .. ..+..++++ +||.+.+.+ |++..- .++
T Consensus 333 ~~~~~~~~~~~~~l~~~L~-~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~l~~~ppl~~t~ 410 (427)
T TIGR00508 333 GEWQKQVSAIENQLKRELS-PLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVE-QGVWIRPFGKLIYVMPPYIITT 410 (427)
T ss_pred CCHHHHHHHHHHHHHHHHH-HhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHHH-CCeEEEecCCEEEEECCCCCCH
Confidence 1234666667777777777 6541000111111233221 111 12 244556666 599998766 666542 289
Q ss_pred hhHHHHHHHHHHHHhh
Q 012628 442 AKCEYLADAIIDSYHN 457 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~ 457 (459)
++|+++++++.+++.+
T Consensus 411 ~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 411 EQLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999865
No 321
>PRK06917 hypothetical protein; Provisional
Probab=99.61 E-value=6.3e-13 Score=134.00 Aligned_cols=343 Identities=11% Similarity=0.013 Sum_probs=185.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCC---CCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL---PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~---~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...||+..|..-...+.. +|.|.+++.+.+++.. +.+. +.....+|.+.+++.+... .+.+.+ ++
T Consensus 30 G~~ylD~~~g~~~~~lGh~--hp~v~~Ai~~ql~~~~-~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~ 98 (447)
T PRK06917 30 GNKYFDGSSGAVTAGIGHG--VKEIADAIKEQAEEVS-FVYRSQFTSEPAEKLAKKLSDLSPGD------LNWSFF--VN 98 (447)
T ss_pred CCEEEECchhHHhccCCCC--CHHHHHHHHHHHhhCc-CccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eC
Confidence 3578898877542223443 7889999988886531 2211 2222334555555543111 256888 99
Q ss_pred cchhHHHHHHHHHHHh------CCCCEEEEcCCCCcchHHHhh-hCCC------------CeeeeeeecCCCC--C----
Q 012628 159 SGTGSLRLAAALIERY------FPGAKVLISSPTWGNHKNIFN-DARV------------PWSEYRYYDPKTV--G---- 213 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~------~~gd~Vlv~~p~y~~~~~~~~-~~G~------------~v~~v~~~~~~~~--~---- 213 (459)
+|++|++.+.++.... ....+|+...-+|.+...... ..|. .+..+|....... .
T Consensus 99 sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 178 (447)
T PRK06917 99 SGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYP 178 (447)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChH
Confidence 9999999998877544 123689999988876543222 1111 1112221000000 0
Q ss_pred ----CCHHHHHHHHHcCC-CCcEEEEeCCCCC-CCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHH
Q 012628 214 ----LDFEGMIADIKAAP-GGSFILLHGCAHN-PTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSV 286 (459)
Q Consensus 214 ----~d~e~l~~~i~~~~-~~~~~ii~~~p~N-PTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~ 286 (459)
-+++.+++.++... +....+|+..... --|. .++++-+++|.++|++||+++|.||+..+++-.+ ..+..
T Consensus 179 ~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG---~~~a~ 255 (447)
T PRK06917 179 TCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTG---AMFAM 255 (447)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCccc---chhhH
Confidence 02456677776432 2345555444343 3444 5678889999999999999999999988774221 12222
Q ss_pred HHHHhcCCeEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHHhh-ccccccCCchHHHHHHHHHhCChhhHHH
Q 012628 287 RLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIVANVVGNPALFDE 364 (459)
Q Consensus 287 ~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 364 (459)
.. .+..++++ +|+|.++ .|+ .+|.+++ .++..+.+...-..+ ...++ +.+.++..++...|+- .
T Consensus 256 ~~-~gv~PDi~---~~gK~l~-~G~~Pi~a~~~---~~~i~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~l~~---l-- 321 (447)
T PRK06917 256 EH-WGVEPDIM---TLGKGLG-AGYTPIAATVV---SDRVMEPILRGSRSIMSGHTL-SANPLSAATALAVLEY---M-- 321 (447)
T ss_pred Hh-cCCCCCEE---Eeeehhc-cCCcceEEEEE---cHHHHHHHhccCcccccccCC-CCCHHHHHHHHHHHHH---H--
Confidence 22 23334544 6799998 775 8898866 777444432211111 11223 3333443444333321 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCcccccCCcceeee--cC-------C------CHHHHHHHHhcccEE
Q 012628 365 WKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSF--TG-------L------NKAQSDNMTNKWHVY 427 (459)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~~--~~-------l------~~~~~~~ll~~~gI~ 427 (459)
++ +...++.+++-++|.+.|+ ++. .| .+..+...|-++.. .. . ...+...+++ +||.
T Consensus 322 -~~--~~l~~~~~~~g~~l~~~L~-~l~~~~~-~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl 395 (447)
T PRK06917 322 -EK--HNLPEKAAEKGEYLIKGLQ-KVQQQST-IIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAK-NGLL 395 (447)
T ss_pred -HH--CCHHHHHHHHHHHHHHHHH-HHHhcCC-CEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHh-CCcE
Confidence 00 1234455555555555555 431 11 01122233333311 11 0 1123445555 6999
Q ss_pred EcCC--------C---cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 428 MTKD--------G---RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 428 v~~g--------g---Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+.+. | |++.. ..++++++++++++.++++++
T Consensus 396 ~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 396 LYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred EEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 9764 2 66543 138999999999999998763
No 322
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=1.7e-12 Score=130.00 Aligned_cols=335 Identities=10% Similarity=0.071 Sum_probs=184.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-..-++. .|.|.+++.+.+++.....+ .......+|.+.+++..... -+.+.+ +++
T Consensus 39 G~~ylD~~~g~~~~~lGh~--~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~S 108 (422)
T PRK05630 39 GSTVIDAMSSWWSAAHGHG--HPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNG------LDHVFY--SDS 108 (422)
T ss_pred CCEEEEcchhHHHhcCCCC--CHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCC------cCEEEE--eCC
Confidence 4578898887653333443 78899999888865221111 12223345555555543111 257888 999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHHhh-hCC-------------CCeeeeeeecCCCCCCC----
Q 012628 160 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNIFN-DAR-------------VPWSEYRYYDPKTVGLD---- 215 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~~~-~~G-------------~~v~~v~~~~~~~~~~d---- 215 (459)
|++|++.+.++...+. ++ .+|+....+|.+...... ..+ ..+..+|... ....+
T Consensus 109 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~ 186 (422)
T PRK05630 109 GSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPP--VRGSSPQEI 186 (422)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCc--ccCCChHHH
Confidence 9999999988876653 23 579999988876432221 111 1122333211 01112
Q ss_pred ---HHHHHHHHHcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHH
Q 012628 216 ---FEGMIADIKAAPGGSFILLHGC-AHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFA 290 (459)
Q Consensus 216 ---~e~l~~~i~~~~~~~~~ii~~~-p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~ 290 (459)
.+.+++.+.+ ....+|+.. ++...|.. ++.+.+++|.++|++||+++|.||++.+++-.+ ..+... ..
T Consensus 187 ~~~~~~~~~~~~~---~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG---~~~a~~-~~ 259 (422)
T PRK05630 187 SEYLRSLELLIDE---TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG---ELFATL-AA 259 (422)
T ss_pred HHHHHHHHHHHhh---ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc---hhhHHH-hc
Confidence 2334444443 455666554 26667764 567889999999999999999999987775321 222222 12
Q ss_pred hcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHH--h-hccccccCCchHHHHHHHH---HhCChhhHH
Q 012628 291 TRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK--R-LARPMYSNPPVHGARIVAN---VVGNPALFD 363 (459)
Q Consensus 291 ~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~---~L~~~~~~~ 363 (459)
+..++++ +++|.++ .| ..+|++++ +++..+.+...-. . ....++. .+.++..++.. .+++.
T Consensus 260 gv~PDi~---t~gK~l~-gG~~p~~av~~---~~~i~~~~~~~~~~~~~~h~~T~~-g~Pla~aaa~aaL~~l~~~---- 327 (422)
T PRK05630 260 GVTPDIM---CVGKALT-GGFMSFAATLC---TDKVAQLISTPNGGGALMHGPTFM-ANPLACAVAHASLEIIETG---- 327 (422)
T ss_pred CCCCCee---eeechhh-cCccccceeec---cHHHHHHHhccCCCCccccCCCCc-CCHHHHHHHHHHHHHHHhC----
Confidence 2334444 7899986 56 47888765 7774444321100 0 1122332 33333333332 23222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeeecCC----CH-HHHHHHHhcccEEEcCCC---cE
Q 012628 364 EWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL----NK-AQSDNMTNKWHVYMTKDG---RI 434 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~~~l----~~-~~~~~ll~~~gI~v~~gg---Ri 434 (459)
...++.+++-+++.+.|+ ++. .| .+.-+.-. |.++-+.+ .. .+...+++ +||.+.+.| ||
T Consensus 328 -------~~~~~~~~~g~~l~~~L~-~l~~~~-~v~~vRg~-Gl~~~ie~~~~~~~~~~~~~~~~-~Gl~~~~~g~~l~~ 396 (422)
T PRK05630 328 -------MWRKQVKRIEAELIAGLS-PLAHLP-GVADVRVL-GAIGVVEMEQPVDMEEATQAAVD-HGVWLRPFGRLVYV 396 (422)
T ss_pred -------cHHHHHHHHHHHHHHHHH-HhhcCC-Ceeeeecc-ccEEEEEECCcccHHHHHHHHHH-CCeEEEecCCEEEE
Confidence 223344444455555554 431 11 01112222 33322211 22 34455555 699998876 55
Q ss_pred EEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 435 SLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 435 s~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
...- .+++++++++++|.++++..
T Consensus 397 ~PpL~it~~~i~~~~~~l~~al~~~ 421 (422)
T PRK05630 397 MPPYITTSEQIAQICAALAAAVKAK 421 (422)
T ss_pred ECCccCCHHHHHHHHHHHHHHHhcc
Confidence 4332 38999999999999998754
No 323
>PRK06105 aminotransferase; Provisional
Probab=99.61 E-value=7.7e-13 Score=133.88 Aligned_cols=340 Identities=11% Similarity=0.046 Sum_probs=189.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...||+..|..-..-++. +|.|.+++.+.+++.. ...+ .......++-+.+++..... -+.+.+ ++
T Consensus 47 G~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~ 116 (460)
T PRK06105 47 GKRYIEGMAGLWSVALGFS--EQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVP------MSKVFF--TN 116 (460)
T ss_pred CCEEEEcchhHHhccCCCC--CHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eC
Confidence 4578999888542333443 7889999998886521 0111 01222234445555443211 257888 99
Q ss_pred cchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHhhh-CCC------------CeeeeeeecCCCCCC-----
Q 012628 159 SGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFND-ARV------------PWSEYRYYDPKTVGL----- 214 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~~~~----- 214 (459)
+|++|++.+.++..... + ..+|+...-+|.+.....-. .|. .+..+|.. ..+..
T Consensus 117 SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~ 194 (460)
T PRK06105 117 SGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCP--HYYRFGLPGE 194 (460)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCC--cccccccCCC
Confidence 99999999988765431 2 35788888888655322111 110 12222221 11111
Q ss_pred --------CHHHHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChh
Q 012628 215 --------DFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 284 (459)
Q Consensus 215 --------d~e~l~~~i~~-~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~ 284 (459)
.++++++.+.. .+++...+|+-..+.-.|.. ++++-+++|.++|++||+++|.||++.+++-.+ ..+
T Consensus 195 ~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG---~~f 271 (460)
T PRK06105 195 SEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTG---NMF 271 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCc---hhh
Confidence 13566776643 22345666666666666765 588889999999999999999999987886321 223
Q ss_pred HHHHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHHH---hh-ccccccCCchHHHHHHHHH---h
Q 012628 285 SVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQLK---RL-ARPMYSNPPVHGARIVANV---V 356 (459)
Q Consensus 285 ~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~---L 356 (459)
.... .+..++++ +++|.++ .| +.+|++++ +++..+.+..... .. ...++ +.+.++..++... +
T Consensus 272 ~~~~-~~v~PDi~---~~gK~lg-gG~~P~~av~~---~~~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~aaa~a~L~~i 342 (460)
T PRK06105 272 GCET-FGIKPDIL---VMSKQLS-SSYQPLSAVLM---NEKVYDPIADESGKIGTFGHGFTA-SGHPVAAAVALENLAII 342 (460)
T ss_pred hHHh-cCCCCCee---eeecccc-cCcccceEEEE---cHHHHHHHhcccccCcccccCCCC-CCCHHHHHHHHHHHHHH
Confidence 3222 23334544 7899998 56 58899866 7774444332100 00 11223 3334443444333 2
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeee-c-CC-------C------HHHHHHHH
Q 012628 357 GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSF-T-GL-------N------KAQSDNMT 421 (459)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~-~-~l-------~------~~~~~~ll 421 (459)
+++ ...++.+++-++|.+.|+ ++.--+.+..+...|-++.+ + .. + ..+...++
T Consensus 343 ~~~-----------~l~~~v~~~g~~l~~~L~-~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~ 410 (460)
T PRK06105 343 EER-----------DLVGNAAERGARLQARLR-ALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAH 410 (460)
T ss_pred Hhc-----------cHHHHHHHHHHHHHHHHH-HhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHH
Confidence 222 334555556666666665 44100001122233322211 1 10 0 12234444
Q ss_pred hcccEEEcCCC---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 422 NKWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 422 ~~~gI~v~~gg---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
++||.+.+.| |++... .++++++++++++.++++++
T Consensus 411 -~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 411 -EHGVISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred -HCCeEEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 4699998866 666432 38999999999999999765
No 324
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.61 E-value=6.6e-13 Score=129.94 Aligned_cols=312 Identities=13% Similarity=0.107 Sum_probs=185.4
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|.....-+.. +|.|.+++++.+++.. ...| +.....+|.+.++++. . .+.+++ +++
T Consensus 23 G~~ylD~~~g~~~~~lGh~--~p~v~~ai~~ql~~~~~~~~~~-~~~~~~~la~~l~~~~-~-------~~~v~~--~~S 89 (364)
T PRK04013 23 GRRYLDLIAGIGVNVLGHN--HPEWVEEMSEQLEKLVVAGPMF-EHEEKEEMLEELSKWV-N-------YEYVYM--GNS 89 (364)
T ss_pred CCEEEEcccChhhccCCCC--CHHHHHHHHHHHHhcCCccCCc-CCHHHHHHHHHHHhhc-C-------CCEEEE--eCc
Confidence 4578898877542333443 6888899888876421 1123 3344456666666663 1 257888 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh--------CCCC-----eeeeeeecCCCCCCCHHHHHHHHHcC
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND--------ARVP-----WSEYRYYDPKTVGLDFEGMIADIKAA 226 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~--------~G~~-----v~~v~~~~~~~~~~d~e~l~~~i~~~ 226 (459)
|++|++.+.++.......++|+..+-+|.+.....-. .+.. +..+|. .|++.+++.+.+
T Consensus 90 GseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~- 161 (364)
T PRK04013 90 GTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVEAAKEAITK- 161 (364)
T ss_pred hHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHHHHHHHhcC-
Confidence 9999999988876654448999999988765322222 1111 122222 267888888864
Q ss_pred CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC
Q 012628 227 PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (459)
Q Consensus 227 ~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (459)
+...+++...+...|.. .+++.+++|.++|++||+++|+||+..++..+ ..+.... .+-.++++ +++|.
T Consensus 162 --~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG----~~~a~~~-~gv~PDiv---~~gK~ 231 (364)
T PRK04013 162 --ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTG----KFLAIEH-YKVEPDIV---TMGKG 231 (364)
T ss_pred --CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCC----chhHHHh-cCCCCCEE---Eeccc
Confidence 66777766666666654 46678999999999999999999998877432 2223322 23345555 56999
Q ss_pred cccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA---NVVGNPALFDEWKAEMEMMAGRIKNVRQK 382 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (459)
++ .|+.+|.++. +.+ +.. ....+++ +.+.++..++. ..+++.++. ++.++.
T Consensus 232 lg-gG~P~~a~~~---~~~----~~~---~~~~~T~-~gnp~~~aaa~a~l~~i~~~~l~-------~~~~~~------- 285 (364)
T PRK04013 232 IG-NGVPVSLTLT---NFD----VER---GKHGSTF-GGNPLACKAVAVTLRILRRERLV-------EKAGEK------- 285 (364)
T ss_pred cc-CCceeEEEEe---ccc----ccC---CCcCCCC-CcCHHHHHHHHHHHHHHHhccHH-------HHHHHH-------
Confidence 99 6899999865 444 211 1122333 33334333333 333333321 111111
Q ss_pred HHHHHhhccCCCCCcccccCCcceeeecCCC---HHHHHHHHhcccEEEcCCC----cEEEc-cCChhhHHHHHHHHHHH
Q 012628 383 LFDSLSAKDKSGKDWSFILRQIGMFSFTGLN---KAQSDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDS 454 (459)
Q Consensus 383 l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~---~~~~~~ll~~~gI~v~~gg----Ris~~-~~~~e~i~~~~~~l~~~ 454 (459)
+ +.+. . + .+.-+.-. |.++-+.+. ....+.+++ +|+.+.+.| |+.-. .++++++++++++|.++
T Consensus 286 l-~~l~-~-~---~v~~vRG~-Gl~~gve~~~~~~~i~~~~~~-~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~ 357 (364)
T PRK04013 286 F-IEIK-G-E---RVVTTRGR-GLMIGIVLKKPVGKYVEELQN-RGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGV 357 (364)
T ss_pred H-HHhc-c-C---cceeeeeC-cEEEEEEeCCcHHHHHHHHHh-CCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 1 1222 1 1 01222223 333222221 234556665 699998765 66533 23899999999999999
Q ss_pred Hhhc
Q 012628 455 YHNV 458 (459)
Q Consensus 455 ~~~~ 458 (459)
++++
T Consensus 358 l~~~ 361 (364)
T PRK04013 358 INDI 361 (364)
T ss_pred HHHH
Confidence 8764
No 325
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=2.4e-12 Score=130.23 Aligned_cols=343 Identities=11% Similarity=0.043 Sum_probs=188.5
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC-CC--CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-EN--KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~--~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|+..|.--..-+.. .|.|.+++.+.++.- .. ..+ +..-..+|-+.+++.+....+. -.-+.+.+ ++
T Consensus 63 G~~ylD~~~g~~~~~lGh~--~p~i~~Ai~~q~~~l~~~~~~~~-~~~~~~~lae~L~~~~p~~~~~-~~~~~v~f--~~ 136 (472)
T PRK08742 63 GRRYLDAVSSWWTNLFGHA--EPRIGAAIAAQAGELEQVMLAGF-THEPAVQLAEQLLAIAPRQDGR-APLSKVFY--AD 136 (472)
T ss_pred CCEEEEcCccHHhccCCCC--CHHHHHHHHHHHHhCCCcccccc-CCHHHHHHHHHHHHhCCCcccC-CCCCEEEE--eC
Confidence 4578898888542233443 788999988877531 10 112 2222234444444443211000 01257888 99
Q ss_pred cchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHhhhC-CC------------CeeeeeeecCC--CCCC---
Q 012628 159 SGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFNDA-RV------------PWSEYRYYDPK--TVGL--- 214 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~~~~~-G~------------~v~~v~~~~~~--~~~~--- 214 (459)
+|++|++.+.++...+. + ..+|+...-+|.+........ |. .+..+|..+.. .++.
T Consensus 137 sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~ 216 (472)
T PRK08742 137 NGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAE 216 (472)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHH
Confidence 99999999988877662 2 368999998887654222211 11 12223331100 0111
Q ss_pred -----CHHHHHHHHHcCCCCcEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012628 215 -----DFEGMIADIKAAPGGSFILLHGC-AHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (459)
Q Consensus 215 -----d~e~l~~~i~~~~~~~~~ii~~~-p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~ 287 (459)
+++.+++.+...++....+|+.. .++-.|. .++++-++++.++|++||+++|.||+..+++-.+ ..+...
T Consensus 217 ~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG---~~~a~e 293 (472)
T PRK08742 217 DYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTG---TLFACE 293 (472)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchHHH
Confidence 25666777754344556666554 3666676 5678889999999999999999999988886432 233332
Q ss_pred HHHhcCCeEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHH--h-hccccccCCchHHHHHHHH---HhCChh
Q 012628 288 LFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLK--R-LARPMYSNPPVHGARIVAN---VVGNPA 360 (459)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~---~L~~~~ 360 (459)
. .+..++++ .++|.++ .|+ .+|.+++ +++..+.+..... . ....++ +.+.++..++.. ++++++
T Consensus 294 ~-~gv~PDiv---~~gKgl~-gG~~Plaav~~---~~ei~~~~~~~~~~~~~~h~~T~-~gnpl~~Aaa~a~L~~i~~~~ 364 (472)
T PRK08742 294 Q-AGVMPDLL---CLSKGLT-GGFLPLSAVLA---TQQLYDAFLDDSRERAFLHSHSY-TGNPLACAAALATLDIFADDD 364 (472)
T ss_pred h-cCCCCCEE---EEccccc-CCCCCcceeec---cHHHHHHhhccCccCccCcCCCC-CccHHHHHHHHHHHHHHHHCC
Confidence 2 23345655 4699998 684 8999866 7774443321100 0 122333 233333333333 233322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH---HHhhccCCCCCcccccCCcceeee--cCC-------C------HHHHHHHHh
Q 012628 361 LFDEWKAEMEMMAGRIKNVRQKLFD---SLSAKDKSGKDWSFILRQIGMFSF--TGL-------N------KAQSDNMTN 422 (459)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~l~~---~L~~~~g~~~~~~~~~~~~g~f~~--~~l-------~------~~~~~~ll~ 422 (459)
+ .++.++.-++|.+ .+. +++. +..+.-.|-++.+ ... . ....+++++
T Consensus 365 l-----------~~~~~~~g~~l~~~~~~~~-~~~~---i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (472)
T PRK08742 365 V-----------IARNQPTAARMTQLAAQIG-EHPH---VADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALA 429 (472)
T ss_pred H-----------HHHHHHHHHHHHHHHHHHh-cCCC---eeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHH
Confidence 2 2222233333333 333 3321 2223333333321 110 0 122445555
Q ss_pred cccEEEcCCC---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 423 KWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 423 ~~gI~v~~gg---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
+||.+.+.| ||.-.- ++++++++++++|.++++++
T Consensus 430 -~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 430 -RGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred -CCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 599998876 554332 38999999999999999763
No 326
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=1.3e-12 Score=132.17 Aligned_cols=344 Identities=9% Similarity=0.025 Sum_probs=193.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-C-CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-N-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~-~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...||+..|......++. +|.|.+++.+.+++.. . ..+.+.....+|.+.+++.+... .+.+.+ +++
T Consensus 55 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~S 124 (460)
T PRK06916 55 GNEYYDGVSSIWLNVHGHQ--VPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEG------LKKVFY--SDS 124 (460)
T ss_pred CCEEEEcchhHHHhhcCCC--CHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--eCC
Confidence 4567888777542222443 7889999988886421 1 11123333345555555553211 257888 999
Q ss_pred chhHHHHHHHHHHHh-----CC-CCEEEEcCCCCcchHHHhhh-CC------------CCeeeeeeecCC--CCC-----
Q 012628 160 GTGSLRLAAALIERY-----FP-GAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPK--TVG----- 213 (459)
Q Consensus 160 gt~a~~l~~~~~~~~-----~~-gd~Vlv~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~--~~~----- 213 (459)
|++|++.+.++...+ .+ ..+|+...-+|.+....... .| ..+..+|..... .+.
T Consensus 125 GseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~ 204 (460)
T PRK06916 125 GATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAE 204 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHH
Confidence 999999998887664 23 36899999888764322211 11 112233321000 001
Q ss_pred ---CCHHHHHHHHHcCCCCcEEEEeCC-CCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH
Q 012628 214 ---LDFEGMIADIKAAPGGSFILLHGC-AHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (459)
Q Consensus 214 ---~d~e~l~~~i~~~~~~~~~ii~~~-p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~ 288 (459)
-+++.+++.++..++....+|+.. .+...|.+ ++++-+++|.++|++||+++|.||+..+++-.+ ..+....
T Consensus 205 ~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG---~~~a~~~ 281 (460)
T PRK06916 205 IVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG---KMFACEH 281 (460)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc---hhhHHHh
Confidence 135666777764444556666555 46666765 588889999999999999999999988775321 2223222
Q ss_pred HHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHHH---Hh-hccccccCCchHHHHHHHHHhCChhhHH
Q 012628 289 FATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQL---KR-LARPMYSNPPVHGARIVANVVGNPALFD 363 (459)
Q Consensus 289 ~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 363 (459)
.+..++++ .++|.++ .| +.+|.+++ +++..+.+.... .. ....++ +.+.++..++...|+ ..
T Consensus 282 -~gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~ei~~~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~l~---~l- 348 (460)
T PRK06916 282 -ENVTPDIM---TAGKGLT-GGYLPIAITVT---TDEIYNAFYGDYEEQKTFFHGHSY-TGNPLGCAVALANLE---LY- 348 (460)
T ss_pred -cCCCCCee---eeehhhh-cCccccceeee---cHHHHHHhhccccccCccccCCCC-CCCHHHHHHHHHHHH---HH-
Confidence 23334554 5799998 78 58999866 777444432211 01 122233 233444334433331 10
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeee--cCC---------C----HHHHHHHHhcccEE
Q 012628 364 EWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSF--TGL---------N----KAQSDNMTNKWHVY 427 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~--~~l---------~----~~~~~~ll~~~gI~ 427 (459)
++ +...++.+++-+++.+.|+ ++. .|. +..+.-.|-++.. ..- + ..+...+++ +||.
T Consensus 349 --~~--~~l~~~~~~~g~~l~~~l~-~l~~~~~-v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl 421 (460)
T PRK06916 349 --EK--TNLIEQVARKTEYVATQLE-DLFALKH-VGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRE-LGML 421 (460)
T ss_pred --Hh--ccHHHHHHHHHHHHHHHHH-HhhcCCC-eEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHH-CCeE
Confidence 00 1234555566666666666 541 110 1112223322211 110 0 123445555 6999
Q ss_pred EcCCC---cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 428 MTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 428 v~~gg---Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+.+.| |+..+ ..+++++++++++|.++++++
T Consensus 422 ~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 422 TRPLGNTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred EEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 99866 55422 238999999999999999765
No 327
>PRK07036 hypothetical protein; Provisional
Probab=99.60 E-value=1.2e-12 Score=132.55 Aligned_cols=341 Identities=11% Similarity=0.088 Sum_probs=187.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|+..|..-..-+.. +|.|.+++.+.++... ...+ .+..-..++.+.+++..... -+.+.+ ++
T Consensus 50 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~ 119 (466)
T PRK07036 50 GRRYLDGIGGMWCVNVGYG--REEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGD------LNHVFL--TT 119 (466)
T ss_pred CCEEEECcccHHhhcCCCC--CHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eC
Confidence 4568888777532222333 7889999888776421 1111 12222234444444442111 257888 99
Q ss_pred cchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHhhhC-C------------CCeeeeeeecC--CCCCCC--
Q 012628 159 SGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIFNDA-R------------VPWSEYRYYDP--KTVGLD-- 215 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~~~~~-G------------~~v~~v~~~~~--~~~~~d-- 215 (459)
+|++|++.+.++...+. + ..+|+...-+|.+........ | ..+..+|.... ...+.+
T Consensus 120 sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 199 (466)
T PRK07036 120 GGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEA 199 (466)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChH
Confidence 99999999988876552 2 368888888887654322211 1 11222332110 011111
Q ss_pred ------HHHHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHH
Q 012628 216 ------FEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVR 287 (459)
Q Consensus 216 ------~e~l~~~i~~-~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~ 287 (459)
++.+++.+.. .++....+|+...+...|.+ ++++-+++|.++|++||+++|.||+..+++-.+ ..+...
T Consensus 200 ~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~~~~ 276 (466)
T PRK07036 200 AFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLG---HFFASE 276 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCc---hhhhhh
Confidence 2344555542 23455666666666666764 577889999999999999999999988885321 122322
Q ss_pred HHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeCChhHHHHHHHH---HH-hhccccccCCchHHHHHHHHHh---CCh
Q 012628 288 LFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCSSSDLAARVKSQ---LK-RLARPMYSNPPVHGARIVANVV---GNP 359 (459)
Q Consensus 288 ~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~L---~~~ 359 (459)
...+..++++ +++|.++ .| +.+|.+++ +++..+.+... .. .....++ +.+.++..++...| +++
T Consensus 277 ~~~gv~PDiv---t~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~Le~i~~~ 348 (466)
T PRK07036 277 AVFGIQPDII---TFAKGLT-SGYQPLGAVII---SERLLDVISGPNAKGNVFTHGFTY-SGHPVACAAALKNIEIMERE 348 (466)
T ss_pred hhcCCCCCEE---EEccccc-cCccccEEEEE---cHHHHHHHhcccCcCcccccCCCC-CCCHHHHHHHHHHHHHHHhC
Confidence 1223334544 6799998 68 48999866 77754444321 00 0111223 33344434443333 222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeeecCC------------C----HHHHHHHHh
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL------------N----KAQSDNMTN 422 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~~~l------------~----~~~~~~ll~ 422 (459)
...++.+++-++|.+.|+ ++. .|. +..+.-.|.++ .+.+ + ..+...+++
T Consensus 349 -----------~l~~~~~~~g~~l~~~L~-~l~~~~~-v~~vrG~Gl~~-~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (466)
T PRK07036 349 -----------GLCEHVREVGPYFEERLA-SLRELPL-VGDVRGDHLMA-CVECVADKGSKALLPEDIAIGQRIDRHCQE 414 (466)
T ss_pred -----------CHHHHHHHHHHHHHHHHH-HhccCCC-EEEEEeeceEE-EEEEccCccccCCCCchhHHHHHHHHHHHH
Confidence 234455555555555555 431 110 11222333332 2211 0 123445555
Q ss_pred cccEEEcCCC---cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 423 KWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 423 ~~gI~v~~gg---Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+||.+.+.| |++.. ..++++|+++++++.++++++
T Consensus 415 -~Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 415 -RGLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred -CCcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 699998865 55533 238999999999998888653
No 328
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.60 E-value=1.1e-14 Score=137.45 Aligned_cols=252 Identities=19% Similarity=0.097 Sum_probs=162.6
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEE
Q 012628 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv 182 (459)
.|.+.+++.+... +. ..|+......++.+.+++++.. +..++ +.+||.++.++.+. .+.|++.|++
T Consensus 8 ~~~m~~a~~~a~~-gd-~~Yg~D~~~~~l~~~i~~l~g~--------e~a~f--~~sGT~An~~al~~--~~~~~~~vi~ 73 (290)
T PF01212_consen 8 TPAMLEAMAAANV-GD-DAYGEDPTTARLEERIAELFGK--------EAALF--VPSGTMANQLALRA--HLRPGESVIC 73 (290)
T ss_dssp -HHEEHHHHHTTS-B--CCTTSSHHHHHHHHHHHHHHTS--------SEEEE--ESSHHHHHHHHHHH--HHHTTEEEEE
T ss_pred CHHHHHHHHcccc-CC-cccCCChhHHHHHHHHHHHcCC--------CEEEE--eCCCChHHHHHHHH--HHhcCCceec
Confidence 7889999966553 33 3698888999999999999743 34556 79999999998443 3579999999
Q ss_pred cCCCCcc---hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc---CCCCcEEEEeCCCCCCC-CCCCCHHHHHHHH
Q 012628 183 SSPTWGN---HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPT-GIDPTPEQWEKIA 255 (459)
Q Consensus 183 ~~p~y~~---~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~ii~~~p~NPT-G~~~s~~~l~~i~ 255 (459)
..+++.. ........|++++.++.. +++.+|++++++.+.. +...+.+|.+.+++|-. |+++|.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 9987642 223335689999999873 3378999999999987 22467888889999885 8999999999999
Q ss_pred HHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHh
Q 012628 256 DVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR 335 (459)
Q Consensus 256 ~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~ 335 (459)
++|++||+.++.|.+--.-... ....+++.+. ..-+.+..|++|.+++++ |.+ ++.+++.++......++
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~~---~~~~~~~e~~--~~~D~v~~~~tK~~g~~~---Gav--l~~~~~~i~~~~~~~k~ 221 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAAA---ALGVSLAEIA--AGADSVSFGGTKNGGAPG---GAV--LAGNKEFIAKARRQRKR 221 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHHC---HHHHHHHHHH--TTSSEEEEETTSTT-SSS---EEE--EEESHHHHHHHHHHHHH
T ss_pred HHHHhCceEEEEehhhHHHhhh---cccccHHHHh--hhCCEEEEEEEccccccc---ceE--EEechHHHHHHHHHHHH
Confidence 9999999999999994322110 0111233332 234566779999998774 777 45677755544443332
Q ss_pred hccccccCCchHHH-----HHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 012628 336 LARPMYSNPPVHGA-----RIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK 392 (459)
Q Consensus 336 ~~~~~~~~~~~~~~-----~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 392 (459)
....+. ..-.+++ ..+...++. | .....+..++.+.|.+.|+ .+|
T Consensus 222 ~gg~~~-~~G~~~a~~~~~~~~l~~l~~------~----~~~~~~~~~~A~~La~~l~-~~~ 271 (290)
T PF01212_consen 222 LGGGMR-QAGVLAAAELYQFAALRALEL------W----LERARHANAMAKRLAAGLE-ALG 271 (290)
T ss_dssp HTHHHH-HTTHHHHHHHHHHHHHCHEEC------S----HHHHHCHHHHHHCHHHCHH-EEC
T ss_pred hccCee-ecceeeeechhhHHHHHHHHh------h----HHHHHHHHHHHHHHHHHHH-HCC
Confidence 211111 0112221 122222221 1 2334555566788888888 876
No 329
>PRK07483 hypothetical protein; Provisional
Probab=99.59 E-value=3e-12 Score=129.02 Aligned_cols=338 Identities=12% Similarity=0.104 Sum_probs=184.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..-...++. +|.|.+++++.++... ...+.......+|.+.+++..... .+.+.+ +++
T Consensus 29 G~~ylD~~~g~~~~~lGh~--~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~s 98 (443)
T PRK07483 29 GKRYLDASGGAAVSCLGHS--HPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAG------LEHVYF--VSG 98 (443)
T ss_pred CCEEEEcCccHhhhccCCC--CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC------CCEEEE--cCC
Confidence 4578899887543333443 7889999998886531 011112222234444444432111 257888 999
Q ss_pred chhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchHHH-hhhCC------------CCeeeeeeecCCCCCC------
Q 012628 160 GTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHKNI-FNDAR------------VPWSEYRYYDPKTVGL------ 214 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~-----~g-d~Vlv~~p~y~~~~~~-~~~~G------------~~v~~v~~~~~~~~~~------ 214 (459)
|++|++.+.++...+. +| .+|+...-+|.+.... +...| ..+..+|.. ..+..
T Consensus 99 GsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~ 176 (443)
T PRK07483 99 GSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPC--YAYREQRAGES 176 (443)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCC--ccccccccCCC
Confidence 9999999998887662 33 5788888888765321 11111 011222211 00110
Q ss_pred -------CHHHHHHHHHc-CCCCcEEEEeCCCCC-CCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChh
Q 012628 215 -------DFEGMIADIKA-APGGSFILLHGCAHN-PTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 284 (459)
Q Consensus 215 -------d~e~l~~~i~~-~~~~~~~ii~~~p~N-PTG-~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~ 284 (459)
.++.+++.+.. .++....+|+...+- -.| ..++++-+++|.++|++||+++|.||+..+++-.+ ..+
T Consensus 177 ~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG---~~~ 253 (443)
T PRK07483 177 DEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG---TLF 253 (443)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc---HHH
Confidence 02556665542 223455555554442 235 45678889999999999999999999988886321 223
Q ss_pred HHHHHHhcCCeEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHHh-hccccccCCchHHHHHHHHH---hCCh
Q 012628 285 SVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVANV---VGNP 359 (459)
Q Consensus 285 ~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---L~~~ 359 (459)
.... .+..++++ .++|.++ .|+ .+|.+++ +++..+.+...-.. ...+++ +.+.++..++... ++++
T Consensus 254 a~~~-~gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~h~~T~-~gnpl~~aaa~a~l~~i~~~ 324 (443)
T PRK07483 254 ACEE-DGVAPDLV---TIAKGLG-AGYQPIGAVLA---SDRIYDAIADGSGFFQHGHTY-LGHATACAAALAVQRVIAED 324 (443)
T ss_pred HHhh-cCCCCCee---eehhhhc-cCccccEEEEE---cHHHHHHHhcCCCccccCCCC-CCCHHHHHHHHHHHHHHHhc
Confidence 3222 23345555 5699998 785 8999866 77744433211000 122233 3333443344333 3332
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccCCCCCcccccCCcceeee-c--C------CC------HHHHHHHH
Q 012628 360 ALFDEWKAEMEMMAGRIKNVRQKLFDSLSA---KDKSGKDWSFILRQIGMFSF-T--G------LN------KAQSDNMT 421 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~g~f~~-~--~------l~------~~~~~~ll 421 (459)
...++.++.-++|.+.|++ +++. +..+.-.|-++.. + + .+ ..+.+.++
T Consensus 325 -----------~l~~~~~~~g~~l~~~L~~l~~~~~~---i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (443)
T PRK07483 325 -----------GLLANVRARGEQLRARLRERLGQHPH---VGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAM 390 (443)
T ss_pred -----------CHHHHHHHHHHHHHHHHHHHHhcCCC---eeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHH
Confidence 2334444455555555540 2221 1122233322211 1 1 00 12345666
Q ss_pred hcccEEEcCC--------C---cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 422 NKWHVYMTKD--------G---RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 422 ~~~gI~v~~g--------g---Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+ +||.+.+. | ||.-. .++++++++++++|.++++++
T Consensus 391 ~-~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 391 A-RGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred H-CCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6 59998653 2 55432 238999999999999998763
No 330
>PRK12403 putative aminotransferase; Provisional
Probab=99.58 E-value=3e-12 Score=129.55 Aligned_cols=340 Identities=12% Similarity=0.033 Sum_probs=181.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCC-CCCC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE-NKEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...||+..|..-..-+.. +|.|.+++.+.+++.. ...+ .+.....+|.+.+++++... -+.+++ ++
T Consensus 53 G~~ylD~~~g~~~~~lGh~--hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~------~~~v~f--~~ 122 (460)
T PRK12403 53 GKRYLDGMSGLWCTNLGYG--RKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGH------YSHAIY--TN 122 (460)
T ss_pred CCEEEECchhHHhhcCCCC--CHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCC------cCEEEE--eC
Confidence 4578898877542333543 6889999998886521 0111 12223345555555553211 257888 99
Q ss_pred cchhHHHHHHHHHHHh-----CCCC-EEEEcCCCCcchHH-HhhhCCCC-----------eeeeeeecC--CCCCC----
Q 012628 159 SGTGSLRLAAALIERY-----FPGA-KVLISSPTWGNHKN-IFNDARVP-----------WSEYRYYDP--KTVGL---- 214 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~-----~~gd-~Vlv~~p~y~~~~~-~~~~~G~~-----------v~~v~~~~~--~~~~~---- 214 (459)
+|++|++.+.++...+ .+++ .|+...-+|.+... .+...|.+ +..+|.... ..+.+
T Consensus 123 SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 202 (460)
T PRK12403 123 SGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAE 202 (460)
T ss_pred CcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHH
Confidence 9999999998887665 1333 35555666765422 22222211 222321100 00011
Q ss_pred ----CHHHHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH
Q 012628 215 ----DFEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL 288 (459)
Q Consensus 215 ----d~e~l~~~i~~-~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~ 288 (459)
+.+.+++.+.+ .++....+|+.....-.|.+ .+++-+++|.++|++||+++|.||+..+++-.+ ..+....
T Consensus 203 ~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG---~~~a~e~ 279 (460)
T PRK12403 203 FGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG---EWFAHEH 279 (460)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhhhhh
Confidence 13456555532 22345566666666666765 567779999999999999999999987775321 1222222
Q ss_pred HHhcCCeEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHHhh-ccccccCCchHHHHHHHHH---hCChhhHH
Q 012628 289 FATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKRL-ARPMYSNPPVHGARIVANV---VGNPALFD 363 (459)
Q Consensus 289 ~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---L~~~~~~~ 363 (459)
.+-.++++ .++|.++ .|. .+|.+++ +++..+.+...-... ...++ +.+.++..++... +++.+
T Consensus 280 -~gv~PDiv---~~gK~lg-gG~~Piga~v~---~~~i~~~~~~~~~~~~~~~T~-~gnPl~~Aaala~L~~i~~~~--- 347 (460)
T PRK12403 280 -FGFEPDTL---SIAKGLT-SGYVPMGGLVL---SKRIAEALVEQGGVFAHGLTY-SGHPVAAAVAIANLKALRDEG--- 347 (460)
T ss_pred -cCCCCCeE---EEccccc-ccccceEEEEE---CHHHHHHHhcCCCccccCCCC-CCCHHHHHHHHHHHHHHHhcc---
Confidence 22234444 4899998 674 8998865 677444432210111 11222 2333333333333 33222
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhh---ccCCCCCcccccCCcceee--ecC-------CCH--H----HHHHHHhcc
Q 012628 364 EWKAEMEMMAGRIK-NVRQKLFDSLSA---KDKSGKDWSFILRQIGMFS--FTG-------LNK--A----QSDNMTNKW 424 (459)
Q Consensus 364 ~~~~~~~~~~~~~~-~~~~~l~~~L~~---~~g~~~~~~~~~~~~g~f~--~~~-------l~~--~----~~~~ll~~~ 424 (459)
..++.+ ++-+++.+.|++ +++. +..+.-.|.++. +.. ... . ....+++ +
T Consensus 348 --------l~~~~~~~~g~~l~~~L~~l~~~~~~---i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 415 (460)
T PRK12403 348 --------VVTRVKDDTGPYLQRCLREVFGDHPL---VGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFE-E 415 (460)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHhcCCC---EEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHh-C
Confidence 223332 334444444430 3331 122223333321 111 010 1 1233445 6
Q ss_pred cEEEcCCC---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 425 HVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 425 gI~v~~gg---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
||.+.+.| |++..- +++++++++++++.++++++
T Consensus 416 Gll~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 416 GVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred CEEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99998754 555432 38999999999999999865
No 331
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.58 E-value=5.6e-13 Score=127.55 Aligned_cols=170 Identities=18% Similarity=0.152 Sum_probs=126.7
Q ss_pred ccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhh----hCCCCee
Q 012628 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFN----DARVPWS 202 (459)
Q Consensus 127 g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~----~~G~~v~ 202 (459)
-...+.+.+++...+ .+.+. .++|..|+..+ +...+.+|++|++....|.+...+++ .+|++..
T Consensus 78 t~~~le~~iaal~ga--------~~~l~--fsSGmaA~~~a--l~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~ 145 (409)
T KOG0053|consen 78 TRDVLESGIAALEGA--------AHALL--FSSGMAAITVA--LLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGD 145 (409)
T ss_pred chHHHHHHHHHHhCC--------ceEEE--ecccHHHHHHH--HHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceee
Confidence 345677777777433 33555 78899888888 55557799999999999988766655 5677777
Q ss_pred eeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCC
Q 012628 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (459)
Q Consensus 203 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~ 282 (459)
.++.+ |++.+++++++ ++.++.+-+|.||+..+ .++++|.++|+++|+++++|+.+.....- +
T Consensus 146 ~vd~~-------~~~~~~~~i~~---~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~~~----~ 208 (409)
T KOG0053|consen 146 FVDVD-------DLKKILKAIKE---NTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPYNQ----D 208 (409)
T ss_pred eechh-------hHHHHHHhhcc---CceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCccccc----C
Confidence 77652 67888888886 89999999999999999 78889999999999999999998776431 1
Q ss_pred hhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHH
Q 012628 283 ASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQL 333 (459)
Q Consensus 283 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~ 333 (459)
.. ..+-+|++.|.+|.++-.+-=+|.+++ ...++...++....
T Consensus 209 pL-------~lGADIV~hSaTKyi~Ghsdvi~G~iv-~n~~~~~~~l~~~~ 251 (409)
T KOG0053|consen 209 PL-------PLGADIVVHSATKYIGGHSDVIGGSVV-LNSEELASRLKFLQ 251 (409)
T ss_pred hh-------hcCCCEEEEeeeeeecCCcceeeeEEe-cCcHHHHHHHHHHH
Confidence 11 123579999999999866655666643 33467555554443
No 332
>PRK07480 putative aminotransferase; Validated
Probab=99.57 E-value=3.3e-12 Score=129.05 Aligned_cols=336 Identities=12% Similarity=0.049 Sum_probs=185.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC-C---CCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-K---EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~---~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
+...||+..|..-..-++. .|.|.+++.+.++.... . .+ +.....+|.+.+++.+... -+.+.+ +
T Consensus 49 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~~~~~~~~~-~~~~~~~lae~L~~~~p~~------~~~v~f--~ 117 (456)
T PRK07480 49 GNKILDGMAGLWCVNVGYG--RKELADAAARQMRELPYYNTFFKT-THPPAIELAAKLAEVAPPG------FNHVFF--T 117 (456)
T ss_pred CCEEEEccchHHHhcCCCC--CHHHHHHHHHHHHhcCCccccccc-CCHHHHHHHHHHHHhCCCC------cCEEEE--e
Confidence 4578898877532222333 78899998888864210 0 12 2233344555555543211 257888 9
Q ss_pred ccchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcchHHHh-hhCCC------------CeeeeeeecCCCC----CC
Q 012628 158 LSGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNHKNIF-NDARV------------PWSEYRYYDPKTV----GL 214 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~~~~~-~~~G~------------~v~~v~~~~~~~~----~~ 214 (459)
++|++|++.+.++...+. + ..+|+...-+|.+..-.. ...|. .+..+|. +..+ ..
T Consensus 118 ~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~ 195 (456)
T PRK07480 118 NSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQ--PYWFGEGGDM 195 (456)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCC--CcccccccCC
Confidence 999999999988876651 3 357888888887643211 11111 1111221 1000 01
Q ss_pred C--------HHHHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChh
Q 012628 215 D--------FEGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 284 (459)
Q Consensus 215 d--------~e~l~~~i~~-~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~ 284 (459)
+ ++.+++.+.. .++....+|+...+.-.|.+ .+.+-+++|.++|++||+++|.||++.+++-.+ ..+
T Consensus 196 ~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG---~~~ 272 (456)
T PRK07480 196 TPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTG---EWF 272 (456)
T ss_pred ChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCc---chh
Confidence 1 2555555532 23355666666666666775 566679999999999999999999988885321 222
Q ss_pred HHHHHHhcCCeEEEEEcCCcCcccCCC-CcceEEEEeCChhHHHHHHHHHHh-hccccccCCchHHHHHHHHHh---CCh
Q 012628 285 SVRLFATRGMELLVAQSYSKNLGLYAE-RIGAMNVVCSSSDLAARVKSQLKR-LARPMYSNPPVHGARIVANVV---GNP 359 (459)
Q Consensus 285 ~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L---~~~ 359 (459)
.... .+..++++ +|+|.++ .|+ .+|.+++ +++..+.+...... ....++ +.+.++..++...| +++
T Consensus 273 a~~~-~gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~T~-~gnpl~~Aaa~a~L~~l~~~ 343 (456)
T PRK07480 273 GSQH-FGIKPDLM---TIAKGLT-SGYIPMGAVGV---GDRVAEVLIEEGGEFNHGFTY-SGHPVAAAVALANLRILRDE 343 (456)
T ss_pred hhhh-cCCCCCee---eeehhhc-cCCccceEEEE---cHHHHHHHhcCCCCcccCCCC-CcCHHHHHHHHHHHHHHHhC
Confidence 3222 23334544 6799998 674 7899866 77744443210011 122233 33344444443333 222
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcc---CCCCCcccccCCcceeee--cCC--------C-----HHHHHHH
Q 012628 360 ALFDEWKAEMEMMAGRI-KNVRQKLFDSLSAKD---KSGKDWSFILRQIGMFSF--TGL--------N-----KAQSDNM 420 (459)
Q Consensus 360 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~---g~~~~~~~~~~~~g~f~~--~~l--------~-----~~~~~~l 420 (459)
...++. +++-++|.+.|+ ++ +. +..+.-.|.++.+ ..- . ..+...+
T Consensus 344 -----------~l~~~~~~~~g~~l~~~l~-~l~~~~~---i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (456)
T PRK07480 344 -----------GIVERVRDDTGPYLQKRLR-ELADHPL---VGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHC 408 (456)
T ss_pred -----------CHHHHHHHHHHHHHHHHHH-HhhcCCC---eeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHH
Confidence 223333 244445555554 33 21 1122233333321 110 0 1123355
Q ss_pred HhcccEEEcCCC---cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 421 TNKWHVYMTKDG---RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 421 l~~~gI~v~~gg---Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
++ +||.+.+.| ||+... .++++|++++++|.++++++
T Consensus 409 ~~-~Gll~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 409 FA-NGLIMRAVGDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred HH-CCcEEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 55 699998765 666443 28999999999999998764
No 333
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.57 E-value=3.8e-14 Score=138.38 Aligned_cols=195 Identities=17% Similarity=0.085 Sum_probs=128.8
Q ss_pred CCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCe
Q 012628 122 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW 201 (459)
Q Consensus 122 Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v 201 (459)
..|..-..+..+.+|+.+..+ +-.++ ++|+|.++..+ +.+.+.|||+|+++..++-.....+...|+++
T Consensus 62 ~~p~G~I~eAe~~aA~~fGAd-------~t~fl--vnGsT~g~~a~--i~a~~~~gd~VLv~RN~HkSv~~alil~ga~P 130 (417)
T PF01276_consen 62 HDPEGIIKEAEELAARAFGAD-------KTFFL--VNGSTSGNQAM--IMALCRPGDKVLVDRNCHKSVYNALILSGAIP 130 (417)
T ss_dssp TTTBTHHHHHHHHHHHHHTES-------EEEEE--SSHHHHHHHHH--HHHHTTTTCEEEEETT--HHHHHHHHHHTEEE
T ss_pred cCCccHHHHHHHHHHHhcCCC-------eEEEE--ecCchHHHHHH--HHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeE
Confidence 334444567777777776543 44666 89999999998 67778999999999999998888999999999
Q ss_pred eeeeeecCCCC----CCCH-----HHHHHHHHcCCCCcE--EEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012628 202 SEYRYYDPKTV----GLDF-----EGMIADIKAAPGGSF--ILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFD 268 (459)
Q Consensus 202 ~~v~~~~~~~~----~~d~-----e~l~~~i~~~~~~~~--~ii~~~p~NPT--G~~~s~~~l~~i~~l~~~~~~~ii~D 268 (459)
++++.. .+.+ ++++ +.+++++++.++... ++++ .||| |++ .++++|+++|+++++.|++|
T Consensus 131 vyi~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvl---t~PTY~Gv~---~di~~I~~~~h~~~~~llvD 203 (417)
T PF01276_consen 131 VYIPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVL---TSPTYYGVC---YDIKEIAEICHKHGIPLLVD 203 (417)
T ss_dssp EEEEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEE---ESS-TTSEE---E-HHHHHHHHCCTECEEEEE
T ss_pred EEecCC-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEE---eCCCCCeEE---ECHHHHHHHhcccCCEEEEE
Confidence 999875 3323 4566 999999998765443 2444 3555 999 78889999999999999999
Q ss_pred ccCCCCC-CCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCCh-hHHHHHHHHHHhh
Q 012628 269 VAYQGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSS-DLAARVKSQLKRL 336 (459)
Q Consensus 269 eay~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~-~~~~~~~~~~~~~ 336 (459)
|||.... +.+...+...+.......+.++++.|.+|.+ +++.-+.++-+.++. -..+++.+.+...
T Consensus 204 EAhGah~~F~~lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~ 271 (417)
T PF01276_consen 204 EAHGAHFGFHPLPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMH 271 (417)
T ss_dssp -TT-TTGGCSGGGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHH
T ss_pred ccccccccCCCCccchhhccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHH
Confidence 9987653 2211111110000001234679999999997 567777766555554 3456676666543
No 334
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.57 E-value=2.2e-12 Score=129.82 Aligned_cols=330 Identities=14% Similarity=0.119 Sum_probs=176.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCC-CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~-~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...||+..|..-...|.. .|.|.+++.+.++... .+. +.....++.+.+++.... .+.+.+ +++|
T Consensus 47 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~q~~~~~--~~~~~~~~~~~la~~l~~~~p~-------~~~v~f--~~sG 113 (431)
T PRK06209 47 GNEYIEYGMGLRAVGLGHA--YPPVVEAVREALQDGC--NFTRPSAIELDAAESFLELIDG-------ADMVKF--CKNG 113 (431)
T ss_pred CCEEEEccccccchhcCCC--CHHHHHHHHHHHHhCc--CCCCCCHHHHHHHHHHHHhCCc-------cceEEE--ecCH
Confidence 4578898877542333443 7889999998887543 232 222222455666655321 257888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEc-CCCCcchHHHh-----hhCCCC--ee--eeeeecCCCCCCCHHHHHHHHHcCCCCc
Q 012628 161 TGSLRLAAALIERYFPGAKVLIS-SPTWGNHKNIF-----NDARVP--WS--EYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~-~p~y~~~~~~~-----~~~G~~--v~--~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 230 (459)
++|++.+.++.+.+....+|+.. .-+|..+.... ...|.. .. .+.+ . --|++.+++.++..++..
T Consensus 114 seA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~d~~~l~~~l~~~~~~~ 188 (431)
T PRK06209 114 SDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF--R---YNDIASLEALFEDHPGRI 188 (431)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc--C---CCCHHHHHHHHHhCCCCE
Confidence 99999998887666443456554 22332211100 001110 00 1111 1 127899998887533344
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCC
Q 012628 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA 310 (459)
Q Consensus 231 ~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 310 (459)
.++++... .|...+.+.+++|.++|++||+++|+||+..++... ...........+++ .+++|.+| .|
T Consensus 189 aavi~Epv---~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~-----~~g~~~~~gv~PDi---~t~gK~lg-gG 256 (431)
T PRK06209 189 ACVILEPA---TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH-----MRGAQKLYGIVPDL---SCFGKALG-NG 256 (431)
T ss_pred EEEEEccc---cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC-----cchhhHHhCCCcce---eeehhhhc-CC
Confidence 45554322 355778899999999999999999999998766432 11222222223343 47899999 68
Q ss_pred CCcceEEEEeCChhHHHH--HHHH-HHh-hccccccCCchHHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012628 311 ERIGAMNVVCSSSDLAAR--VKSQ-LKR-LARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 383 (459)
Q Consensus 311 ~RiG~~~~v~~~~~~~~~--~~~~-~~~-~~~~~~~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (459)
+.+|++++ +++..+. +... ... .....+.+++.++..++ ...+++.++ +++.++.-+..++.|
T Consensus 257 ~p~~av~~---~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~-------~~~~~~~g~~l~~~L 326 (431)
T PRK06209 257 FAVSALAG---KREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDV-------IERLHEQGAKLAAGV 326 (431)
T ss_pred cccEEEEE---HHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCH-------HHHHHHHHHHHHHHH
Confidence 88899865 6663332 1000 001 00111223333333333 333333322 223333333333333
Q ss_pred HHHHhhccCCCCCcccccCCccee--eec--C---C-CH----HHHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHH
Q 012628 384 FDSLSAKDKSGKDWSFILRQIGMF--SFT--G---L-NK----AQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 451 (459)
Q Consensus 384 ~~~L~~~~g~~~~~~~~~~~~g~f--~~~--~---l-~~----~~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l 451 (459)
.+... +++++. .+...|.++ .++ + . .. .+.+++++ +||.+.| -+|+... ++++|+++++++
T Consensus 327 ~~~~~-~~~~~~---~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p~-l~is~~h-t~~dId~~l~~l 399 (431)
T PRK06209 327 NEAAA-EHGLQD---HVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMPS-LVVSYAH-GDADIERTIDAV 399 (431)
T ss_pred HHHHH-hCCCCe---EEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCccccc-ccccccC-CHHHHHHHHHHH
Confidence 33333 344211 111122222 111 1 1 11 23456656 5998743 3556444 999999999999
Q ss_pred HHHHhhc
Q 012628 452 IDSYHNV 458 (459)
Q Consensus 452 ~~~~~~~ 458 (459)
.++++++
T Consensus 400 ~~~l~~~ 406 (431)
T PRK06209 400 HGALGVY 406 (431)
T ss_pred HHHHHHH
Confidence 9988764
No 335
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.57 E-value=4.6e-12 Score=128.18 Aligned_cols=343 Identities=11% Similarity=0.019 Sum_probs=185.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCC--CCCCcccHHHHHHHHHHHhcCCCCcccc-CceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKE--YLPIEGLAAFNKVTAELLFGADNSVLKE-QRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--Y~~~~g~~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ 158 (459)
+...+|+..|.-...-++. +|.|.+++.+.+++..... +.+.....+|-+.+++.+... ... +.+.+ .++
T Consensus 62 G~~ylD~~~g~~~~~lGh~--~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~----~~~~~~v~f-~~~ 134 (464)
T PRK06938 62 GRQFIDCLAGAGTLALGHN--HPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEA----FAREAKIQF-CGP 134 (464)
T ss_pred CCEEEEccCCccccccCCC--CHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCccc----ccccceEEE-eCC
Confidence 4578888777642333443 7889999988875422111 112222233444444432111 000 24544 136
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-CC------------CCeeeeeeecCCC--CC--------CC
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-AR------------VPWSEYRYYDPKT--VG--------LD 215 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~--~~--------~d 215 (459)
+|++|++.+.++.+......+|+...-+|.+....... .| ..+..+|...... ++ .+
T Consensus 135 SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 214 (464)
T PRK06938 135 TGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRAN 214 (464)
T ss_pred CcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHH
Confidence 99999999988877665557899988888765432221 11 0223343311100 00 13
Q ss_pred HHHHHHHHHcCC---CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh
Q 012628 216 FEGMIADIKAAP---GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT 291 (459)
Q Consensus 216 ~e~l~~~i~~~~---~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~ 291 (459)
++.+++.+.+.. +....+|+-..+.--|.+ ++++-++++.++|++||+++|.||+..+++-.+ ..+.... .+
T Consensus 215 ~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG---~~~a~e~-~g 290 (464)
T PRK06938 215 LHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG---KMFAFEH-AG 290 (464)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---HHHHHHh-cC
Confidence 667777776421 235555655555555765 568889999999999999999999988886321 2233222 23
Q ss_pred cCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHH
Q 012628 292 RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEM 371 (459)
Q Consensus 292 ~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~ 371 (459)
-.++++ .++|.+| .|+.+|.+++ .++ ++.+. ......++ +.+.++..++...|+ +. ++ +.
T Consensus 291 v~PDiv---~~gKglg-gG~PlsAv~~---~~~-~~~~~---~~~~~~T~-~gnpla~Aaa~a~L~---~l---~~--~~ 350 (464)
T PRK06938 291 IIPDVV---VLSKAIG-GSLPLAVVVY---REW-LDTWQ---PGAHAGTF-RGNQMAMAAGSATLR---YI---KE--HR 350 (464)
T ss_pred CCCCEE---Eeecccc-CCCceEEEee---hhH-hhccC---CCCCCCCC-CcCHHHHHHHHHHHH---HH---HH--hH
Confidence 345555 4699998 7899999865 444 22221 11122333 333444444433332 11 00 12
Q ss_pred HHHHHHHHHHHHHHHHhhccC--CCCCcccccCCcceeee--cCC------------C----HHHHHHHHhcccEEEcCC
Q 012628 372 MAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSF--TGL------------N----KAQSDNMTNKWHVYMTKD 431 (459)
Q Consensus 372 ~~~~~~~~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~~--~~l------------~----~~~~~~ll~~~gI~v~~g 431 (459)
..++.+++-++|.+.|+ ++. .|. +..+.-.|-++.. ..- + ..+...+++ +||.+.++
T Consensus 351 l~~~~~~~G~~l~~~L~-~l~~~~~~-i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~ 427 (464)
T PRK06938 351 LAEHAAAMGERLREHLR-QLQRDYPQ-LGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR-RGLILELG 427 (464)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhCCC-eeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-CCeEEeec
Confidence 33444444555555554 331 110 1122223322211 110 1 123445555 69999774
Q ss_pred C------cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 432 G------RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 432 g------Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
| |+..+ ..++++++++++++.+++.++
T Consensus 428 g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 428 GRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 3 55422 239999999999999998763
No 336
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.57 E-value=8.8e-13 Score=131.94 Aligned_cols=282 Identities=12% Similarity=0.054 Sum_probs=181.1
Q ss_pred ccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC---C
Q 012628 100 PYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF---P 176 (459)
Q Consensus 100 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~---~ 176 (459)
+.+++...+.+...+..+. ..+....+..++.+.+..++....+.+- .-.=.+ |.|||+++.++..+..... .
T Consensus 72 ~~~~~~a~~~~~~~~~~nl-~d~~~~p~a~~~E~~~v~~l~~l~~~~~-~~~G~~--t~GgTean~lal~aar~~~~~~~ 147 (460)
T COG0076 72 TRVPPVAAELLVSALNKNL-GDPDESPAAAELEERVVNMLSDLLGAPE-EASGTF--TSGGTEANLLALLAARERWRKRA 147 (460)
T ss_pred CCCHHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCCCC-CCceEE--EcChHHHHHHHHHHHHHHHHHHh
Confidence 4447777788887776543 2222233666777777777766665541 222334 8999999998754433211 1
Q ss_pred ---CC------EEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEE--EEeCCCCCCCCCC
Q 012628 177 ---GA------KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI--LLHGCAHNPTGID 245 (459)
Q Consensus 177 ---gd------~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~--ii~~~p~NPTG~~ 245 (459)
+. +|+++.-.+..+...++..|.+...+|+... +..+|+++++++|.+ .+.. |+-..+..+||.+
T Consensus 148 ~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~---~t~~g~vV~~aGtT~~G~i 223 (460)
T COG0076 148 LAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDE---NTIGGVVVGTAGTTDTGSI 223 (460)
T ss_pred hhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHh---hccCceEEEEecCCCCCcc
Confidence 11 6999999999999999999999999999643 789999999999998 3333 6667799999999
Q ss_pred CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhH
Q 012628 246 PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDL 325 (459)
Q Consensus 246 ~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~ 325 (459)
+++++|.++|+++++++++|.||.++...=.+.+.. .+.....-+-+..+++|.+. .-..+||+ +.++++.
T Consensus 224 ---Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~---~~f~l~~vdSIt~d~HK~g~-aP~~~G~i--l~rd~e~ 294 (460)
T COG0076 224 ---DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR---WDFGLEGVDSITVDGHKYGL-APIGCGVV--LFRDEEA 294 (460)
T ss_pred ---CCHHHHHHHHHHcCCcEEEEccccceeecccCccch---hhcCCCCceEEEECcccccC-CCCCceEE--EEECHHH
Confidence 999999999999999999999999887421111111 11122234456679999864 44558998 4566643
Q ss_pred HHHHHHHHHhhcc-----ccccCCchHH-----HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012628 326 AARVKSQLKRLAR-----PMYSNPPVHG-----ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK 395 (459)
Q Consensus 326 ~~~~~~~~~~~~~-----~~~~~~~~~~-----~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 395 (459)
..+....-..... ......+..+ +.+....|. .+.++++.++..+..+++.+.|+ +.|.
T Consensus 295 l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG--------~eGy~~l~~~~~~~a~~la~~l~-~~~~-- 363 (460)
T COG0076 295 LRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLG--------REGYRKLLDRTLELARYLAEELE-KLGD-- 363 (460)
T ss_pred hhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhC--------HhHHHHHHHHHHHHHHHHHHHHH-hCCC--
Confidence 3222221111111 1111111112 222222222 34567888888899999999999 8752
Q ss_pred Cccccc-CCcceeeec
Q 012628 396 DWSFIL-RQIGMFSFT 410 (459)
Q Consensus 396 ~~~~~~-~~~g~f~~~ 410 (459)
++.+. |.....+|-
T Consensus 364 -~e~~~~p~l~~V~fr 378 (460)
T COG0076 364 -FELVNEPELPIVAFR 378 (460)
T ss_pred -cEeecCCccceEEEE
Confidence 45554 544444443
No 337
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=3.2e-12 Score=120.28 Aligned_cols=324 Identities=18% Similarity=0.244 Sum_probs=200.1
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCC------CCcccHHH---HHHHHHHHhcCCCCccccCceE
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGLAAF---NKVTAELLFGADNSVLKEQRVA 153 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~l---r~aia~~l~~~~~~~~~~~~i~ 153 (459)
...|+|-.-++ .+++.|++++...+.+....+|+ -.+-++++ ....++.+++.. --|
T Consensus 26 ~~~ieLIASEN-------~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~-----~an-- 91 (413)
T COG0112 26 REHIELIASEN-------FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAE-----YAN-- 91 (413)
T ss_pred hhceeeeeccc-------cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCC-----ccc--
Confidence 37788887665 23889999988877543333332 22222333 333333333321 123
Q ss_pred EeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh---hhCC--CCeeeeeeecCCCCCCCHHHHHHHHHcCCC
Q 012628 154 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF---NDAR--VPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (459)
Q Consensus 154 ~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~---~~~G--~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~ 228 (459)
+|..+|+.|+..+ +.+++.|||+|+-.+-.+.+|...- ...| .+++.++++ .++..+|.|++++.+.+.
T Consensus 92 -VQPhSGs~AN~av--~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd-~et~~IDyD~~~k~a~e~-- 165 (413)
T COG0112 92 -VQPHSGSQANQAV--YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVD-PETGLIDYDEVEKLAKEV-- 165 (413)
T ss_pred -cCCCCchHHHHHH--HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccc-cccCccCHHHHHHHHHHh--
Confidence 3467888888888 6777899999999998777665432 2233 356677775 467899999999998884
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC-CCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
++++++...-..| -.-+++++.++|.+-|.++++|.++- ++.-++.-.++ + ....++..|-+|+|
T Consensus 166 kPK~ii~G~SaY~-----r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P--~------~~AdvVTtTTHKTl- 231 (413)
T COG0112 166 KPKLIIAGGSAYS-----RPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNP--L------PHADVVTTTTHKTL- 231 (413)
T ss_pred CCCEEEECccccc-----cccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCC--C------CccceEeCCcccCC-
Confidence 5567774322222 23568889999999999999999963 33333221111 1 12578899999997
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDS 386 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (459)
.|-|=|.+ .+.++++.++ +.....+...+.|..-..++ +-.+. +..+-.+++..++..++.+.|.+.
T Consensus 232 -rGPrGG~I--l~~~eel~kk----in~aVFPg~qggpl~HviAakaVa~~-----Eal~p~fk~Ya~qVv~NAkaLAe~ 299 (413)
T COG0112 232 -RGPRGGII--LTNDEELAKK----INSAVFPGLQGGPLMHVIAAKAVAFK-----EALEPEFKEYAKQVVKNAKALAEA 299 (413)
T ss_pred -CCCCceEE--EeccHHHHHH----hhhhcCCccCCChHHHHHHHHHHHHH-----HHcChhHHHHHHHHHHHHHHHHHH
Confidence 57777777 4555674444 44333233322222211111 11111 111122467777888888899999
Q ss_pred HhhccCCCCCcccccCCcceee-ec-----CCCHHHHHHHHhcccEEEcCC-------------C-cEEEc-----cCCh
Q 012628 387 LSAKDKSGKDWSFILRQIGMFS-FT-----GLNKAQSDNMTNKWHVYMTKD-------------G-RISLA-----GLSL 441 (459)
Q Consensus 387 L~~~~g~~~~~~~~~~~~g~f~-~~-----~l~~~~~~~ll~~~gI~v~~g-------------g-Ris~~-----~~~~ 441 (459)
|. +.| ++++..-.-..+ .+ +++.+.++.+|++.||.+... | ||.-. +..+
T Consensus 300 l~-~~G----~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e 374 (413)
T COG0112 300 LK-ERG----FKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGE 374 (413)
T ss_pred HH-HcC----CeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCH
Confidence 98 887 465542211222 22 346788999999999987543 3 77522 3367
Q ss_pred hhHHHHHHHHHHHHhh
Q 012628 442 AKCEYLADAIIDSYHN 457 (459)
Q Consensus 442 e~i~~~~~~l~~~~~~ 457 (459)
+|++++.+-|.++++.
T Consensus 375 ~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 375 AEMEEIADLIADVLDG 390 (413)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 8999999999988875
No 338
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.56 E-value=5.1e-12 Score=127.33 Aligned_cols=336 Identities=11% Similarity=0.042 Sum_probs=180.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHH--HHHHHhhcC-----CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEE
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKK--AENLMLERG-----ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~--a~~~~~~~~-----~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (459)
+...+|+..|..-...|+. +|.|.+ ++++.+++- ....| ......++-+.+++.... . .-+.+.+
T Consensus 44 G~~ylD~~~g~~~~~lGh~--~p~v~~~~ai~~ql~~l~~~~~~~~~~-~~~~~~~la~~l~~~~~p-~----~~~~v~f 115 (443)
T PRK08297 44 GRRYLDMFTFFASSALGMN--HPALADDPEFRAELGRAALNKPSNSDV-YTVEMARFVDTFARVLGD-P----ELPHLFF 115 (443)
T ss_pred CCEeeecccCHhhhcCCCC--ChHHhhHHHHHHHHHHhhhhccccCCc-CCHHHHHHHHHHHhhcCC-C----CCCEEEE
Confidence 4567888777543333443 677888 777766431 10112 222333444445444210 0 1368999
Q ss_pred eecccchhHHHHHHHHHHHhC------C------CCEEEEcCCCCcchHHHhhh-CCCCe-----------eeeeeec--
Q 012628 155 VQGLSGTGSLRLAAALIERYF------P------GAKVLISSPTWGNHKNIFND-ARVPW-----------SEYRYYD-- 208 (459)
Q Consensus 155 ~~t~ggt~a~~l~~~~~~~~~------~------gd~Vlv~~p~y~~~~~~~~~-~G~~v-----------~~v~~~~-- 208 (459)
+++|++|++.+.++...+. . ..+|+...-+|.+....... .|... ..+|...
T Consensus 116 --~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (443)
T PRK08297 116 --VDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLR 193 (443)
T ss_pred --eCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCC
Confidence 9999999999988876541 1 25799999888765432222 12100 0011000
Q ss_pred ----CCC-C---C---CCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCC
Q 012628 209 ----PKT-V---G---LDFEGMIADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (459)
Q Consensus 209 ----~~~-~---~---~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~ 276 (459)
..+ . . -+++.+++.+...++....+|+...+...|.+ ++++.+++|.++|++||+++|.||++.+++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGR 273 (443)
T PRK08297 194 FPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL 273 (443)
T ss_pred CCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence 000 0 0 02455566676544566666665555555654 7888899999999999999999999988864
Q ss_pred CCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHH-HHHH--hhccccccCCchHHHHHHH
Q 012628 277 GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVK-SQLK--RLARPMYSNPPVHGARIVA 353 (459)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~ 353 (459)
.+ ..+.... .+..++++ .|+|.++ +|.+++ .++.. .+. ..+. .....++ +.+.++..++.
T Consensus 274 tG---~~~a~~~-~gv~PDiv---~~gK~l~-----~~a~l~---~~~i~-~~~~~~~~~~~~~~~T~-~gnpl~~aaa~ 336 (443)
T PRK08297 274 TG---TAWAYQQ-LGVRPDIV---AFGKKTQ-----VCGIMA---GRRVD-EVEDNVFAVSSRINSTW-GGNLVDMVRAR 336 (443)
T ss_pred cc---hHHHHHh-cCCCCCEE---Eeccccc-----ccceec---chHHH-HhhhhhccCccccCCCC-CccHHHHHHHH
Confidence 32 2222222 23334545 4799874 344422 22311 121 1111 1122223 33444444443
Q ss_pred HHh---CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCcccccCCcceeeecCC-C----HHHHHHHHhc
Q 012628 354 NVV---GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSFTGL-N----KAQSDNMTNK 423 (459)
Q Consensus 354 ~~L---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~~~~l-~----~~~~~~ll~~ 423 (459)
..| ++. ...++.+++-+++.+.|+ ++. .|.-...+...|. ++.+.+ + ..+.+.+++
T Consensus 337 a~L~~l~~~-----------~l~~~~~~~g~~l~~~L~-~l~~~~~~~~~~vrg~G~-~~~i~~~~~~~~~~~~~~l~~- 402 (443)
T PRK08297 337 RILEVIEED-----------GLVENAARQGEYLLARLE-ELAAEFPAVVSNVRGRGL-MCAFDLPTTADRDEVIRRLWE- 402 (443)
T ss_pred HHHHHHHhc-----------CHHHHHHHHHHHHHHHHH-HHHHHCCCcceeeeccce-EEEEEecCHHHHHHHHHHHHH-
Confidence 333 222 233344444445545444 321 1110112333433 333322 2 234556665
Q ss_pred ccEEEcCCC----cEE--EccCChhhHHHHHHHHHHHHhhcC
Q 012628 424 WHVYMTKDG----RIS--LAGLSLAKCEYLADAIIDSYHNVS 459 (459)
Q Consensus 424 ~gI~v~~gg----Ris--~~~~~~e~i~~~~~~l~~~~~~~~ 459 (459)
+||.+.|+| ||+ +.. +++++++++++|.++++++.
T Consensus 403 ~Gvl~~~~~~~~lr~~P~l~~-t~~eid~~l~~l~~~l~~~~ 443 (443)
T PRK08297 403 EGVLVLPCGERSIRFRPALTV-TTEEIDAAIDALRRALPEVA 443 (443)
T ss_pred CCEEEecCCCCeEEEECCccC-CHHHHHHHHHHHHHHHHhhC
Confidence 699998866 664 333 89999999999999998763
No 339
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.55 E-value=9.6e-12 Score=125.79 Aligned_cols=337 Identities=15% Similarity=0.076 Sum_probs=181.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCC--CCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENK--EYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...||+..|..-..-++. +|.|.+++++.++..... .+.+.....+|.+.+++...... .....+++ +++
T Consensus 57 G~~ylD~~~g~~~~~lGH~--~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~---~~~~~~f~--~~S 129 (459)
T PRK06931 57 GNQYLDCLAGAGTLALGHN--HPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQG---KEYCLQFT--GPS 129 (459)
T ss_pred CCEEEEcccchhhccCCCC--CHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCcc---ccceEEEe--CCC
Confidence 4578899888642333443 788999998887642211 11122222344444444321100 00012344 689
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhC-C------------CCeeeeeeecCCCCCC------CHHHH-
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA-R------------VPWSEYRYYDPKTVGL------DFEGM- 219 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-G------------~~v~~v~~~~~~~~~~------d~e~l- 219 (459)
|++|++.+.++...+...++|+...-+|.+........ | ..+..+|..+.....+ +.+.+
T Consensus 130 GsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK06931 130 GADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALT 209 (459)
T ss_pred cHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHH
Confidence 99999999988877766678999999887764433321 1 1123333311100000 22332
Q ss_pred ---HHHHHc---CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc
Q 012628 220 ---IADIKA---APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR 292 (459)
Q Consensus 220 ---~~~i~~---~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~ 292 (459)
++.+.. .++....+|+-..+.-.|.+ .+++-+++|.++|++||+++|.||+..+++-.+ ..+.... .+-
T Consensus 210 ~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG---~~~a~~~-~gv 285 (459)
T PRK06931 210 YYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTG---KMFAFEH-AGI 285 (459)
T ss_pred HHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCc---hHHHhhh-cCC
Confidence 233321 12335555555555555654 578889999999999999999999988886321 2233222 233
Q ss_pred CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHh---CChhhHHHHHHHH
Q 012628 293 GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEM 369 (459)
Q Consensus 293 ~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~~~~~~~~~~~~~ 369 (459)
.++++ +++|.++ .|+.+|.+.+ .++ ++.+. .....+++ +.+.++..++...| ++.
T Consensus 286 ~PDiv---t~gK~l~-gG~Pi~av~~---~~~-~~~~~---~~~~~~T~-~gnpla~aaala~L~~l~~~---------- 343 (459)
T PRK06931 286 EPDII---VMSKAVG-GGLPLAVLGI---KKE-FDAWQ---PGGHTGTF-RGNQLAMATGLTTLKILKEE---------- 343 (459)
T ss_pred CCCEE---Eeccccc-CCcceeeeee---HHH-Hhhcc---CCCCCCCC-CCCHHHHHHHHHHHHHHHhC----------
Confidence 45555 5799998 7899998644 444 22221 11222333 33444444443333 222
Q ss_pred HHHHHHHHHHHHHHHHHHhhc----cCCCCCcccccCCcceeee--cCC------------CH----HHHHHHHhcccEE
Q 012628 370 EMMAGRIKNVRQKLFDSLSAK----DKSGKDWSFILRQIGMFSF--TGL------------NK----AQSDNMTNKWHVY 427 (459)
Q Consensus 370 ~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~g~f~~--~~l------------~~----~~~~~ll~~~gI~ 427 (459)
...++.++.-++|.+.|+ + ++. +..+.-.|.++.+ ..- +. .+...+++ +||.
T Consensus 344 -~l~~~~~~~G~~l~~~L~-~l~~~~~~---i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl 417 (459)
T PRK06931 344 -NLAQNAAERGEWLKAQLA-ELQKRYPC---IGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFE-NGLL 417 (459)
T ss_pred -CHHHHHHHHHHHHHHHHH-HHHHhCCC---eEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHH-CCcE
Confidence 223444444445555554 3 321 1222233333211 110 11 22344555 6999
Q ss_pred EcCCC------cEEEcc-CChhhHHHHHHHHHHHHhh
Q 012628 428 MTKDG------RISLAG-LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 428 v~~gg------Ris~~~-~~~e~i~~~~~~l~~~~~~ 457 (459)
+.+.| |+..+- .++++++++++++.+++++
T Consensus 418 ~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 418 LERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred EeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 97653 554332 2999999999999998875
No 340
>PRK15029 arginine decarboxylase; Provisional
Probab=99.54 E-value=1.5e-12 Score=136.25 Aligned_cols=195 Identities=14% Similarity=0.041 Sum_probs=128.8
Q ss_pred CCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCe
Q 012628 122 YLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPW 201 (459)
Q Consensus 122 Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v 201 (459)
+.|..-..+..+..|+.++.+ .-.++ ++|+|.++..+ +.+.+.+||+|+++..++-+....+...|+++
T Consensus 201 ~~p~G~I~eAq~~aA~~fgA~-------~t~Fl--vNGST~gn~a~--i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~P 269 (755)
T PRK15029 201 LDHTGAFGESEKYAARVFGAD-------RSWSV--VVGTSGSNRTI--MQACMTDNDVVVVDRNCHKSIEQGLILTGAKP 269 (755)
T ss_pred CCCCcHHHHHHHHHHHHhCCC-------cEEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeE
Confidence 434444566666677765442 44556 89999999987 66678899999999999999888999999999
Q ss_pred eeeeeecCC---CCCCC-----HHHHHHHHHcCCCCc-------EEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCCe
Q 012628 202 SEYRYYDPK---TVGLD-----FEGMIADIKAAPGGS-------FILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHI 264 (459)
Q Consensus 202 ~~v~~~~~~---~~~~d-----~e~l~~~i~~~~~~~-------~~ii~~~p~NPT--G~~~s~~~l~~i~~l~~~~~~~ 264 (459)
++++-.-.+ ..+++ ++.++++++..+... ++++++ ||| |++ .++++|+++|+++++.
T Consensus 270 vyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt---~PTY~Gv~---~di~~I~~~~h~~~~~ 343 (755)
T PRK15029 270 VYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVT---NCTYDGVC---YNAKEAQDLLEKTSDR 343 (755)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEE---CCCCccee---eCHHHHHHHHHhcCCe
Confidence 998643211 12344 899999997754322 255553 555 999 6778899999999999
Q ss_pred eEEeccCCCCC-CCCCCCChhHHHH-HHh-cCCeEEEEEcCCcCcccCCCCcceEEEEeCCh--hHHHHHHHHHHh
Q 012628 265 PFFDVAYQGFA-SGSLDNDASSVRL-FAT-RGMELLVAQSYSKNLGLYAERIGAMNVVCSSS--DLAARVKSQLKR 335 (459)
Q Consensus 265 ii~Deay~~~~-~~~~~~~~~~~~~-~~~-~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~--~~~~~~~~~~~~ 335 (459)
+++||||.... +.+.-+...++.. ... .+..++++.|.+|.+ +++.-|.++=+.+++ -..+++...+..
T Consensus 344 llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id~~r~~~~l~~ 417 (755)
T PRK15029 344 LHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMM 417 (755)
T ss_pred EEEECccccccccCccccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCCccccCHHHHHHHHHH
Confidence 99999986643 3221000011100 001 234569999999997 466666654333331 123456655554
No 341
>PRK06148 hypothetical protein; Provisional
Probab=99.53 E-value=6.8e-12 Score=137.94 Aligned_cols=335 Identities=12% Similarity=0.055 Sum_probs=187.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC-CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+|+..|.. .-|+. +|.|.+++.+.++.. ....| ......+|-+.+++.+... -+.+.+ +++|
T Consensus 623 G~~ylD~~~g~~--~lGH~--hp~v~~Ai~~q~~~l~~~~~~-~~~~~~~lAe~L~~~~p~~------~~~v~f--~nSG 689 (1013)
T PRK06148 623 GRAYLDCFNNVC--HVGHA--HPRVVAAAARQAARLNTNTRY-LHDAIVAYAERLTATLPDG------LTVAFF--VNSG 689 (1013)
T ss_pred CCEEEEcccChh--hcCCC--CHHHHHHHHHHHhhcCCcCCc-CCHHHHHHHHHHHHhCCCC------cCEEEE--eCCc
Confidence 356778877742 23443 788999998887642 11223 2333344555555543211 256888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh-C--------C----CCeeeeeeecC--CCCCC-C-------HH
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND-A--------R----VPWSEYRYYDP--KTVGL-D-------FE 217 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~-~--------G----~~v~~v~~~~~--~~~~~-d-------~e 217 (459)
++|++.+.++.+......+|+...-+|.+....... . + ..+..++..+. ..+.. | .+
T Consensus 690 sEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 769 (1013)
T PRK06148 690 SEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAE 769 (1013)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHH
Confidence 999999999887776667899999888765321111 1 1 01111111000 00110 1 13
Q ss_pred HHHHHHH---cCCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012628 218 GMIADIK---AAPGGSFILLHGCAHNPTGI-DPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (459)
Q Consensus 218 ~l~~~i~---~~~~~~~~ii~~~p~NPTG~-~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (459)
.+++.+. ..++....+|+-...--.|. .++++-+++|.++|++||+++|.||+..+++-.+ ...+....+ +-.
T Consensus 770 ~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG--~~~~a~e~~-gv~ 846 (1013)
T PRK06148 770 SVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVG--SHWWAFETQ-GVV 846 (1013)
T ss_pred HHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCC--Ccchhhhhc-CCC
Confidence 4555453 22234556665554444454 5678889999999999999999999988886321 112232222 233
Q ss_pred CeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHH---hCChhhHHHHHHHHH
Q 012628 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANV---VGNPALFDEWKAEME 370 (459)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---L~~~~~~~~~~~~~~ 370 (459)
++++ +++|.+| .|+.+|.+++ .++..+.+... ....+++ +.+.++..++... ++++
T Consensus 847 PDiv---t~gK~lg-gG~Plgav~~---~~ei~~~~~~g--~~~~~Tf-~gnpla~aaa~a~L~~i~~e----------- 905 (1013)
T PRK06148 847 PDIV---TMGKPIG-NGHPMGAVVT---TREIADSFDNG--MEYFNTF-GGNPVSCAIGLAVLDIIEDE----------- 905 (1013)
T ss_pred ccee---eeccccc-CCcceEEEEE---cHHHHhhccCC--CccccCC-CCCHHHHHHHHHHHHHHhhc-----------
Confidence 4554 6799999 7999999866 77744433211 0112233 3344444444333 3332
Q ss_pred HHHHHHHHHHHHHHHHHhhcc----CCCCCcccccCCcceeee--cC-C-----C----HHHHHHHHhcccEEEcCCC--
Q 012628 371 MMAGRIKNVRQKLFDSLSAKD----KSGKDWSFILRQIGMFSF--TG-L-----N----KAQSDNMTNKWHVYMTKDG-- 432 (459)
Q Consensus 371 ~~~~~~~~~~~~l~~~L~~~~----g~~~~~~~~~~~~g~f~~--~~-l-----~----~~~~~~ll~~~gI~v~~gg-- 432 (459)
...++.+++-++|.+.|+ ++ +. +..+.-.|-++.+ .. - + ..+.+.+++ +||.+.+.|
T Consensus 906 ~l~~~~~~~G~~l~~~L~-~l~~~~~~---i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~g~~ 980 (1013)
T PRK06148 906 DLQRNALEIGNYLLAGLR-ELQDRFDI---IGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARE-RGILIGTEGPH 980 (1013)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHhCCC---ceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHh-CCeEEeccCCC
Confidence 233445555555555555 43 21 1112223322211 11 0 1 123445555 699998754
Q ss_pred ----cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 433 ----RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 433 ----Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
||...- .+++++++++++|.++++++
T Consensus 981 ~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 981 DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 554332 28999999999999999764
No 342
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.52 E-value=5.1e-12 Score=117.72 Aligned_cols=162 Identities=19% Similarity=0.119 Sum_probs=128.0
Q ss_pred CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchH----HHhhhCCCC
Q 012628 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHK----NIFNDARVP 200 (459)
Q Consensus 125 ~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~G~~ 200 (459)
..-...|.+.|+.+=.+ +..+.+.+|+.|+..+ ++....+||.|+..+--|.+-. ..++..|.+
T Consensus 61 NPT~~vlE~RiAaLEGG----------~aa~a~aSG~AA~~~a--i~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~ 128 (426)
T COG2873 61 NPTTDVLEERIAALEGG----------VAALAVASGQAAITYA--ILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIE 128 (426)
T ss_pred CchHHHHHHHHHHhhcc----------hhhhhhccchHHHHHH--HHHhccCCCeeEeeccccCchHHHHHHHHHhcCcE
Confidence 34567888999988333 2223378999999998 7777889999999997776544 445688999
Q ss_pred eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012628 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (459)
Q Consensus 201 v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~ 280 (459)
+..++- .|+|.++++|++ +|+++++.+-.||-+.+ -+++.|+++|+++|+++|+|..+..-.
T Consensus 129 v~fvd~-------~d~~~~~~aI~~---nTkavf~EtigNP~~~v---~Die~ia~iAh~~gvpliVDNT~atpy----- 190 (426)
T COG2873 129 VRFVDP-------DDPENFEAAIDE---NTKAVFAETIGNPGLDV---LDIEAIAEIAHRHGVPLIVDNTFATPY----- 190 (426)
T ss_pred EEEeCC-------CCHHHHHHHhCc---ccceEEEEeccCCCccc---cCHHHHHHHHHHcCCcEEEecCCCcce-----
Confidence 998854 368999999997 89999999999999999 778899999999999999999965532
Q ss_pred CChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 281 NDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
-++.+ +..-.|++.|.+|.+|-.|--+|.+++-+++
T Consensus 191 ----l~rP~--~hGADIVvHS~TK~igGhGt~iGG~iVD~G~ 226 (426)
T COG2873 191 ----LCRPI--EHGADIVVHSATKYIGGHGTAIGGVIVDGGK 226 (426)
T ss_pred ----ecchh--hcCCCEEEEeecccccCCccccceEEEeCCc
Confidence 12221 2345788999999999999999999875544
No 343
>PRK06149 hypothetical protein; Provisional
Probab=99.52 E-value=6.8e-12 Score=137.88 Aligned_cols=337 Identities=12% Similarity=0.059 Sum_probs=186.3
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCC-CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSG 160 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~gg 160 (459)
+...+|+..|.. .-+. -+|.|.+++.+.+..... ..| ......+|.+.+++.+... -+.+.+ +++|
T Consensus 584 G~~ylD~~~~~~--~lGh--~hp~v~~Ai~~q~~~l~~~~~~-~~~~~~elae~L~~~~p~~------~~~v~f--~~SG 650 (972)
T PRK06149 584 GRSYLDMVNNVT--VLGH--GHPRLAAAAARQWSLLNTNSRF-HYAAVAEFSERLAALAPDG------LDTVFL--VNSG 650 (972)
T ss_pred CCEEEECCCCcc--ccCC--CCHHHHHHHHHHHHhccccccc-cCHHHHHHHHHHHHhCCCC------cCEEEE--eCCc
Confidence 457888887643 2233 378899998887754321 112 2223345555555554211 257888 9999
Q ss_pred hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhh--------CCC------CeeeeeeecCC--CCC-CC-----HHH
Q 012628 161 TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFND--------ARV------PWSEYRYYDPK--TVG-LD-----FEG 218 (459)
Q Consensus 161 t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~--------~G~------~v~~v~~~~~~--~~~-~d-----~e~ 218 (459)
++|++.+.++...+....+|+..+-+|.+....... .+. .+..++..+.. .+. .| .+.
T Consensus 651 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~ 730 (972)
T PRK06149 651 SEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRD 730 (972)
T ss_pred hHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHH
Confidence 999999988877776557888888888754321110 000 11222221000 011 11 234
Q ss_pred HHHHHH---cCCCCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC
Q 012628 219 MIADIK---AAPGGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (459)
Q Consensus 219 l~~~i~---~~~~~~~~ii~~~p~NPTG-~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~ 294 (459)
+++.++ ..+++...+|+-......| ..++++-+++|.++|++||+++|.||+..+++-.+ ...+....+ +-.+
T Consensus 731 ~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG--~~~~a~e~~-gv~P 807 (972)
T PRK06149 731 VVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG--HYFWGFEQQ-GVVP 807 (972)
T ss_pred HHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC--ccchhhhhc-CCCC
Confidence 444333 2233455555544444445 55778889999999999999999999977776432 112233222 2234
Q ss_pred eEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHh---CChhhHHHHHHHHHH
Q 012628 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVV---GNPALFDEWKAEMEM 371 (459)
Q Consensus 295 ~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---~~~~~~~~~~~~~~~ 371 (459)
+++ +++|.+| .|+.+|++++ +++..+.+... .....++ +.+.++..++...| ++. .
T Consensus 808 Div---t~gK~lg-~G~Pl~av~~---~~~i~~~~~~~--~~~~sT~-~gnP~~~aaala~L~~i~~e-----------~ 866 (972)
T PRK06149 808 DII---TMAKGMG-NGHPLGAVIT---RREIAEALEAE--GYFFSST-GGSPVSCRIGMAVLDVLREE-----------K 866 (972)
T ss_pred CEE---Eeccccc-CCeeeEEEEE---cHHHHhhhccC--CcccCCC-CCCHHHHHHHHHHHHHHHhc-----------C
Confidence 544 7899999 7899999866 77744433221 1111223 33334434443333 222 3
Q ss_pred HHHHHHHHHHHHHHHHhhccC--CCCCcccccCCcceeee--cCC------C----HHHHHHHHhcccEEEcCCC-----
Q 012628 372 MAGRIKNVRQKLFDSLSAKDK--SGKDWSFILRQIGMFSF--TGL------N----KAQSDNMTNKWHVYMTKDG----- 432 (459)
Q Consensus 372 ~~~~~~~~~~~l~~~L~~~~g--~~~~~~~~~~~~g~f~~--~~l------~----~~~~~~ll~~~gI~v~~gg----- 432 (459)
..++.++.-++|.+.|+ ++. .| .+..+.-.|-++.+ +.. + ..+..++++ +||.+.+.|
T Consensus 867 l~~~~~~~G~~l~~~L~-~l~~~~~-~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~-~Gvl~~~~g~~~~v 943 (972)
T PRK06149 867 LQENARRVGDHLKARLE-ALADRHP-LIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLE-LGVIMQPTGDHLNI 943 (972)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhCC-CeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHh-CCeEEeecCCCCCE
Confidence 34455555555666555 431 10 01122223322211 110 1 123456666 599998866
Q ss_pred -cEEEc-cCChhhHHHHHHHHHHHHhhc
Q 012628 433 -RISLA-GLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 433 -Ris~~-~~~~e~i~~~~~~l~~~~~~~ 458 (459)
||.-. ..+++++++++++|.+++++.
T Consensus 944 l~~~Ppl~it~~~id~~~~~l~~~l~~~ 971 (972)
T PRK06149 944 LKIKPPLCLDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHhh
Confidence 33322 238999999999999998763
No 344
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.52 E-value=1.3e-11 Score=125.83 Aligned_cols=262 Identities=11% Similarity=0.095 Sum_probs=159.9
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCC-Cc--------ccc--CceEEeecccchhHHHHHHHHHHHhC-------------
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADN-SV--------LKE--QRVATVQGLSGTGSLRLAAALIERYF------------- 175 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~-~~--------~~~--~~i~~~~t~ggt~a~~l~~~~~~~~~------------- 175 (459)
..|.......++.+.+.+|+....+ .+ -.+ ..-++ |+|||+|+..+....+...
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~--tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~ 196 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAF--CSGGTVANITALWVARNRLLKADGDFKGVARE 196 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEE--cCchHHHHHHHHHHHHHHhccccccccccccc
Confidence 4444555566777777777654421 10 011 12345 8999999998754433221
Q ss_pred -----------CCCEEEEcCCCCcchHHHhhhCCC---CeeeeeeecCCCCCCCHHHHHHHHHc---CCCCcEEEEeCCC
Q 012628 176 -----------PGAKVLISSPTWGNHKNIFNDARV---PWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCA 238 (459)
Q Consensus 176 -----------~gd~Vlv~~p~y~~~~~~~~~~G~---~v~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~ii~~~p 238 (459)
++..|++++-.+......++..|. +++.+|+ ++++.+|++.|++.|++ ...+...++.+..
T Consensus 197 gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~--d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataG 274 (522)
T TIGR03799 197 GLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT--DANNRIDVDALRDKCAELAEQNIKPLAIVGVAG 274 (522)
T ss_pred cchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe--CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 134688888888888888888887 7899999 45689999999999863 1223344444566
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc-CCeEEEEEcCCc-CcccCCCCcceE
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR-GMELLVAQSYSK-NLGLYAERIGAM 316 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK-~~~~~G~RiG~~ 316 (459)
++.||.+ +++++|+++|+++|+++++|.+|.+...- ....+..+.. ..-+.++.|.+| .+++.| +|.+
T Consensus 275 tt~tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~-----~~~~r~~l~gle~aDSit~d~HK~l~~P~g--~G~l 344 (522)
T TIGR03799 275 TTETGNI---DPLDEMADIAQELGCHFHVDAAWGGATLL-----SNTYRHLLKGIERADSVTIDAHKQLYVPMG--AGMV 344 (522)
T ss_pred CcCCCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHh-----CHHHHHHhcCchhCCEEEEChhhcCCcCcc--cEEE
Confidence 7899999 99999999999999999999998754321 0112222232 245678889999 456555 7888
Q ss_pred EEEeCChhHHHHHHH---HHHhh-c-----cccccCCchHH--HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 317 NVVCSSSDLAARVKS---QLKRL-A-----RPMYSNPPVHG--ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 317 ~~v~~~~~~~~~~~~---~~~~~-~-----~~~~~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
+ .++++..+.+.. .+... . .....+-+..+ ..++...+. .+.++++.++..++++++.+
T Consensus 345 l--vr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG--------~~G~~~ii~~~~~la~~l~~ 414 (522)
T TIGR03799 345 L--FKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIG--------RKGYELLIDQSIEKAKYFAD 414 (522)
T ss_pred E--EeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHHHH
Confidence 4 445553332221 11000 0 00011122222 112222222 34568888999999999999
Q ss_pred HHhhccCCCCCcccccC-Ccceeee
Q 012628 386 SLSAKDKSGKDWSFILR-QIGMFSF 409 (459)
Q Consensus 386 ~L~~~~g~~~~~~~~~~-~~g~f~~ 409 (459)
.|+ +.+ +++++.+ +-+..+|
T Consensus 415 ~L~-~~~---~~el~~~p~l~iv~F 435 (522)
T TIGR03799 415 LIQ-QQP---DFELVTEPELCLLTY 435 (522)
T ss_pred HHh-hCC---CeEEecCCCccEEEE
Confidence 998 653 2565443 3444443
No 345
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.49 E-value=2.6e-11 Score=114.36 Aligned_cols=343 Identities=12% Similarity=0.056 Sum_probs=201.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC--CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...||+..+......++. .|++.+++.+.+.+- ....|...+ .-++.+.+.+.+..- ..+.|.+ .++
T Consensus 55 g~EyiD~~ssw~~~~~Gha--npev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~~-----~~~rvff--~ns 124 (433)
T KOG1401|consen 55 GKEYIDFTSSWAVTILGHA--NPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGKG-----SAERVFF--CNS 124 (433)
T ss_pred cceeeeeccceeccccCCC--CHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccCC-----CccEEEE--ecC
Confidence 3468888888753433443 789999988766542 112332322 233444444443211 3789999 999
Q ss_pred chhHHHHHHHHHHHhCCC----C--EEEEcCCCCcchH-HHhhhCCCCeeeeeeec---C--CCCCCCHHHHHHHHHcCC
Q 012628 160 GTGSLRLAAALIERYFPG----A--KVLISSPTWGNHK-NIFNDARVPWSEYRYYD---P--KTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~g----d--~Vlv~~p~y~~~~-~~~~~~G~~v~~v~~~~---~--~~~~~d~e~l~~~i~~~~ 227 (459)
||+|++.+.++...+.-- + ++|....+|.+.. ..+..++..-...|.++ + ...--|..++++.++.+.
T Consensus 125 GTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~ 204 (433)
T KOG1401|consen 125 GTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHK 204 (433)
T ss_pred CcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCC
Confidence 999999998887665421 2 4888888886542 22232232222222210 0 001227899999998865
Q ss_pred CCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCc
Q 012628 228 GGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNL 306 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 306 (459)
.....+|+-..+-.-|.. ..++-+..|.+.|+++|+++|.||+..+|+--+ ..|.-. ++...+++. ++.|.+
T Consensus 205 ~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g---~~~a~e-~~~~~PDI~---t~aK~L 277 (433)
T KOG1401|consen 205 GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLG---YGWAQE-YFGVTPDIT---TVAKPL 277 (433)
T ss_pred CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccc---hHHHHH-HhCcCCcce---eehhhc
Confidence 455667766666666654 677889999999999999999999988876332 233332 233344544 789999
Q ss_pred ccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHH---HhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012628 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVAN---VVGNPALFDEWKAEMEMMAGRIKNVRQKL 383 (459)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~L~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (459)
+ .|+.+|...+ ++...+.+.......+..++ +.+.++..++.. .|.++++ ++++.+.-+..++.+
T Consensus 278 ~-gGlPigA~~v---~~kV~~~i~~~~~l~hg~Tf-~gnpLacsa~~~~l~~l~~~e~-------~k~vs~~~k~L~~~l 345 (433)
T KOG1401|consen 278 G-GGLPIGATGV---RDKVAEMISPGDHLYHGGTF-SGNPLACSAGIKVLDELKDPET-------LKNVSKIGKELRKLL 345 (433)
T ss_pred c-CCceeEEEee---hHHHHhhcCCCCccccCccc-CCChhhhhHHHHHHHHHcCHHH-------HHHHHHHHHHHHHHH
Confidence 9 8999999977 66644443322222223333 444444444433 3445533 456666666667777
Q ss_pred HHHHhhccCCCCCcccccCCcceeee---c-CC----CH-----HH----HHHHHhcccEEEcCCCcEEEccCChhhHHH
Q 012628 384 FDSLSAKDKSGKDWSFILRQIGMFSF---T-GL----NK-----AQ----SDNMTNKWHVYMTKDGRISLAGLSLAKCEY 446 (459)
Q Consensus 384 ~~~L~~~~g~~~~~~~~~~~~g~f~~---~-~l----~~-----~~----~~~ll~~~gI~v~~ggRis~~~~~~e~i~~ 446 (459)
.+.+. +.+. .+.-. -..++++. . .+ +. .+ ...+++ .||.+.|-+=+++.+ ++|.++.
T Consensus 346 ~e~~~-~~~~--~i~g~-~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~-~gv~i~P~~~l~~~~-~~E~i~~ 419 (433)
T KOG1401|consen 346 DEYLK-KTPN--SICGG-VGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLE-EGVRIAPIYLLTVEH-TPEVIQR 419 (433)
T ss_pred HHHhc-cCCC--ceeee-eeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhccccc-ceEEEeccccccccC-cHHHHHH
Confidence 77766 5421 11111 11222221 1 11 11 11 112333 377887744445544 5889999
Q ss_pred HHHHHHHHHhhcC
Q 012628 447 LADAIIDSYHNVS 459 (459)
Q Consensus 447 ~~~~l~~~~~~~~ 459 (459)
+++.+.+.+.+++
T Consensus 420 ~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 420 LLTILEKVLSALN 432 (433)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988764
No 346
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.48 E-value=5.9e-12 Score=122.63 Aligned_cols=321 Identities=19% Similarity=0.230 Sum_probs=171.8
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCC------CCccc---HHHHHHHHHHHhcCCCCccccCc-eE
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYL------PIEGL---AAFNKVTAELLFGADNSVLKEQR-VA 153 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~---~~lr~aia~~l~~~~~~~~~~~~-i~ 153 (459)
..|+|-..++ .++|.+++++...+......+|+ -..-+ +.+....+..+++.. ++. -+
T Consensus 21 ~~l~LiaSEN-------~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~-----~~~w~a 88 (399)
T PF00464_consen 21 STLNLIASEN-------YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE-----PKEWYA 88 (399)
T ss_dssp HSEE-CTT------------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S-----TTTEEE
T ss_pred cCccccCccc-------ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC-----cccceE
Confidence 5688887664 23788888887776443323221 12222 333333333333321 232 33
Q ss_pred EeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHH---Hhhh-------CCCCeeeeeeecCCCCCCCHHHHHHHH
Q 012628 154 TVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKN---IFND-------ARVPWSEYRYYDPKTVGLDFEGMIADI 223 (459)
Q Consensus 154 ~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~---~~~~-------~G~~v~~v~~~~~~~~~~d~e~l~~~i 223 (459)
-+|..+|+.|+..+ +.+.+.|||+|+..++...+|.. .... ...+.+.++++ ++++.+|.|++++.+
T Consensus 89 nvqp~SGs~An~av--~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d-~~~~~ID~d~l~~~a 165 (399)
T PF00464_consen 89 NVQPHSGSQANLAV--YMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD-PDTGLIDYDELEKLA 165 (399)
T ss_dssp E---SSHHHHHHHH--HHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHHH
T ss_pred EeecCCchHHHHHH--HHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeee-cCCCeECHHHHHHHH
Confidence 36778999999888 66668899999999987765532 1111 23567788885 467899999999998
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC-CCCCCCCCCChhHHHHHHhcCCeEEEEEcC
Q 012628 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSY 302 (459)
Q Consensus 224 ~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 302 (459)
++. ++++|++..-++| -+-+++++.++|.+.|.++++|.++. ++..++.-.+ + +. ..+++.+|.
T Consensus 166 ~~~--kPklIi~G~S~y~-----~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~--P----~~--~ADvvt~sT 230 (399)
T PF00464_consen 166 KEH--KPKLIICGASSYP-----RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPN--P----FP--YADVVTGST 230 (399)
T ss_dssp HHH----SEEEEE-SSTS-----S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS----G----CC--TSSEEEEES
T ss_pred hhc--CCCEEEECchhcc-----CccCHHHHHHHHHhcCcEEEecccccccceehheecC--c----cc--cceEEEeec
Confidence 874 4556765443333 23678899999999999999999963 2322221111 1 11 246888999
Q ss_pred CcCcccCCCCcceEEEEeC-------------ChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHH
Q 012628 303 SKNLGLYAERIGAMNVVCS-------------SSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEM 369 (459)
Q Consensus 303 SK~~~~~G~RiG~~~~v~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~ 369 (459)
+|+| +|-|-|.+. +. ++++.+++.+..-...++.. ....+++.+++ |.+ .. ..+.
T Consensus 231 hKtl--~GPrggiI~--~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~-h~~~iaalAva--l~e-a~----~~~f 298 (399)
T PF00464_consen 231 HKTL--RGPRGGIIL--TNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGP-HMHRIAALAVA--LKE-AL----SPEF 298 (399)
T ss_dssp SGGG---SSS-EEEE--ES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS---HHHHHHHHHH--HHH-HT----SHHH
T ss_pred cccc--cccCceEEE--EcCCccccCCcccccHHHHHHHhccccCCCcccCc-chhHHHHHHHH--Hhc-cc----CHHH
Confidence 9997 577778773 44 36655555444322111100 12222322221 111 00 1223
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCc-ceeeec-----CCCHHHHHHHHhcccEEEc----CC--------
Q 012628 370 EMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI-GMFSFT-----GLNKAQSDNMTNKWHVYMT----KD-------- 431 (459)
Q Consensus 370 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~-g~f~~~-----~l~~~~~~~ll~~~gI~v~----~g-------- 431 (459)
+++.++..++.+.|.+.|. +.| ++++.... .-.+|+ +++...+++.|++.||.+. |+
T Consensus 299 k~Ya~qVv~NAk~La~~L~-~~G----~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~s 373 (399)
T PF00464_consen 299 KEYAKQVVKNAKALAEALQ-ERG----FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPS 373 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTT-----EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-S
T ss_pred HHHHHHHHHHHHHHHHHHh-hCC----cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCC
Confidence 5777788888899999999 887 46553211 123444 3467788899999999874 22
Q ss_pred C-cEEEc-----cCChhhHHHHHHHH
Q 012628 432 G-RISLA-----GLSLAKCEYLADAI 451 (459)
Q Consensus 432 g-Ris~~-----~~~~e~i~~~~~~l 451 (459)
| ||+-. ++.+++++++.+-|
T Consensus 374 GlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 374 GLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp EEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred EEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 3 88632 34677777776643
No 347
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.47 E-value=2.9e-11 Score=118.14 Aligned_cols=344 Identities=13% Similarity=0.090 Sum_probs=191.2
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcC-C--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG-E--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|-..|..-..-+.- .+++.+++.+.++.- + ...+ ...-..+|-+.+++..... + -++|++ +.
T Consensus 43 G~r~lDg~sg~W~~~~Gh~--~~~i~~Ai~~Q~~~l~~~~~~~~-t~~Pa~~LA~~L~~~aP~~-~----l~~vFf--~~ 112 (449)
T COG0161 43 GRRYLDGMSGLWCVNHGHG--RPEIAEAIKKQLDKLPHVMFGGF-THEPAIELAEKLAELAPEG-G----LDHVFF--TD 112 (449)
T ss_pred CCEEEecccHHHHhhcCcC--CHHHHHHHHHHHHhCCchhhccc-CCchHHHHHHHHHHhCCCC-C----ccEEEE--eC
Confidence 4467777777653333443 688888888877541 1 1112 1222566777777775421 1 378999 99
Q ss_pred cchhHHHHHHHHHHHhC-----CC-CEEEEcCCCCcchH--------------HHhhhCCCCeeeeeeec---C---CCC
Q 012628 159 SGTGSLRLAAALIERYF-----PG-AKVLISSPTWGNHK--------------NIFNDARVPWSEYRYYD---P---KTV 212 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~-----~g-d~Vlv~~p~y~~~~--------------~~~~~~G~~v~~v~~~~---~---~~~ 212 (459)
||++|++.+.++...+. |. .++|.-..+|.+-. ......-..+..+|... . ..+
T Consensus 113 sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~ 192 (449)
T COG0161 113 SGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEG 192 (449)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCC
Confidence 99999999988876542 32 34777778885321 11111111222232211 0 011
Q ss_pred C----CCHHHHHHHHHcCC-CCcEEEEeCCCCCC-CCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhH
Q 012628 213 G----LDFEGMIADIKAAP-GGSFILLHGCAHNP-TGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASS 285 (459)
Q Consensus 213 ~----~d~e~l~~~i~~~~-~~~~~ii~~~p~NP-TG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~ 285 (459)
. -..++|++.|.... +....+|.-....- +|.. +++.-|+++.++|++||+++|.||+-.+|+-.+ ....
T Consensus 193 ~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG---~~FA 269 (449)
T COG0161 193 DEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTG---KMFA 269 (449)
T ss_pred hHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCc---hhhh
Confidence 1 23567777777754 44455554444444 6754 566669999999999999999999988887432 2222
Q ss_pred HHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHH-HHh-hccccccCCchHHHHHHHHHhCChhhHH
Q 012628 286 VRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ-LKR-LARPMYSNPPVHGARIVANVVGNPALFD 363 (459)
Q Consensus 286 ~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 363 (459)
... .+-.++++ .++|.+.-.=+.+|.+++ +++..+.+.+. ... .+..++ +.+.++..++..-| +..+
T Consensus 270 ~e~-~gi~PDi~---~~aKGLT~GY~Pl~a~l~---~~~I~~~~~~~~~~~f~HG~TY-sghPlacAaAla~L---~i~e 338 (449)
T COG0161 270 CEH-AGIVPDIL---CLAKGLTGGYLPLSAVLT---SDRIYEAFSDGDAGAFMHGHTY-SGNPLACAAALANL---DILE 338 (449)
T ss_pred hhh-cCCCCCee---eecccccccchhhHhHhh---hHHHHHHHhcccCCeeccCCcc-ccCHHHHHHHHHHH---HHHH
Confidence 211 22334555 567877633356676655 66655555543 111 122333 33333333332222 2211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc-cC-CCCCcccccCCcceeeecCC----C---------HHHHHHHHhcccEEE
Q 012628 364 EWKAEMEMMAGRIKNVRQKLFDSLSAK-DK-SGKDWSFILRQIGMFSFTGL----N---------KAQSDNMTNKWHVYM 428 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-~g-~~~~~~~~~~~~g~f~~~~l----~---------~~~~~~ll~~~gI~v 428 (459)
+ +.+.++.++...++.+.|+ + +. .|. +.-+ ..-|+..-+.+ . ...+.....++|+.+
T Consensus 339 ~-----e~l~~~~~~~~~~l~~~L~-~~l~~~p~-VgdV-R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~i 410 (449)
T COG0161 339 E-----EDLLERVAEIGAYLQAGLQ-AALADHPL-VGDV-RGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLI 410 (449)
T ss_pred h-----cCHHHHHHHHHHHHHHHHH-HhcccCCc-EEEe-eccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEE
Confidence 0 2444555566667777776 5 21 000 1111 12233322211 1 223444454569999
Q ss_pred cCCC-cEEEcc---CChhhHHHHHHHHHHHHhh
Q 012628 429 TKDG-RISLAG---LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 429 ~~gg-Ris~~~---~~~e~i~~~~~~l~~~~~~ 457 (459)
+|.| -|-++. ++++|++++++++.+++++
T Consensus 411 Rp~g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 411 RPLGDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred eecCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 9998 444442 3899999999999999875
No 348
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.47 E-value=1.3e-11 Score=120.71 Aligned_cols=261 Identities=14% Similarity=0.102 Sum_probs=161.9
Q ss_pred eEEeecccchhHHHHHHHHHHHhC-CCCEEEEcCCCCcc-hH-HHhhhCCC-CeeeeeeecCCCCCCCHHHHHHHHHcCC
Q 012628 152 VATVQGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGN-HK-NIFNDARV-PWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 152 i~~~~t~ggt~a~~l~~~~~~~~~-~gd~Vlv~~p~y~~-~~-~~~~~~G~-~v~~v~~~~~~~~~~d~e~l~~~i~~~~ 227 (459)
+++ +.+||++++.+ +.+.+. +|++|++.. .|.. +. ++++.+|+ ++..+.. +.+..+|+++++. +
T Consensus 61 ~~l--~GsGT~a~Eaa--~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~--~--- 128 (374)
T TIGR01365 61 GIV--PASDTGAVEMA--LWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF--K--- 128 (374)
T ss_pred EEE--CCchHHHHHHH--HHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC--C---
Confidence 455 88999999998 666674 889999865 5543 34 78888999 4777765 5677889998872 1
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc
Q 012628 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 307 (459)
.. + .+++....||+..+ ++++++.+ ++.++|+|.+ +.++..+.+. + .-++++.|--|.++
T Consensus 129 -~~-v-~~vhnETSTGv~np---v~~i~~~~--~~~lliVDav-Ss~g~~~l~~---------d--~iDv~~tgsQK~L~ 188 (374)
T TIGR01365 129 -ND-V-VFTWNGTTSGVRVP---NGDFIPAD--REGLTICDAT-SAAFAQDLDY---------H--KLDVVTFSWQKVLG 188 (374)
T ss_pred -CC-E-EEecCCCchheecc---cccccccc--CCCcEEEEcc-chhcCCCCCh---------h--HCcEEEEechhccC
Confidence 22 3 34445566688854 44555322 5899999999 7776543221 1 14566677788887
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHH---------HH---------hhc-cccccCCchHHHHHHHHHhCChhhHHHHHH-
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQ---------LK---------RLA-RPMYSNPPVHGARIVANVVGNPALFDEWKA- 367 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~---------~~---------~~~-~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~- 367 (459)
+|+- ++++++ +++.+++.... +. ... ..+...|+..+..++...|.. +. ++
T Consensus 189 ~ppG-ls~v~v---s~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~--i~---~eg 259 (374)
T TIGR01365 189 GEGA-HGMLIL---SPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKW--AE---SIG 259 (374)
T ss_pred CCCc-eEEEEE---CHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHH--HH---Hcc
Confidence 6542 667655 77766654421 11 001 112223333343433333320 00 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCccccc------CCcce-eee-cC-C-----C-----HHHHHHHHhcccEEE
Q 012628 368 EMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFIL------RQIGM-FSF-TG-L-----N-----KAQSDNMTNKWHVYM 428 (459)
Q Consensus 368 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~------~~~g~-f~~-~~-l-----~-----~~~~~~ll~~~gI~v 428 (459)
.++.+.++++++++.+++.++ ++|+ +.... +..-. +.+ .+ + + .+.+...++++||.+
T Consensus 260 Gle~~~~Rh~~~a~~l~~~l~-~lg~---l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i 335 (374)
T TIGR01365 260 GLKPLIARADDNLAVLEAFVA-KNNW---IHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAY 335 (374)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HCCC---cccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEE
Confidence 378999999999999999999 9982 12222 11111 112 12 3 1 344565666679999
Q ss_pred cCCC--------cEE-EccCChhhHHHHHHHHHHHHhh
Q 012628 429 TKDG--------RIS-LAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 429 ~~gg--------Ris-~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
.+|. ||+ ++.++.++++.+++.|.-+...
T Consensus 336 ~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 336 DIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred eccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 8773 996 5667999999999999876543
No 349
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.46 E-value=6.7e-12 Score=130.05 Aligned_cols=173 Identities=13% Similarity=0.092 Sum_probs=113.7
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeee
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~ 203 (459)
|..-..+..+.+|+.++.+ .-.++ ++|+|.++..+ +.+.+.+||+|++...++-+....+...|+++++
T Consensus 193 ~~G~i~eAe~~AA~~fgAd-------~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVY 261 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNAD-------RSYMV--TNGTSTANKIV--GMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIY 261 (714)
T ss_pred CChHHHHHHHHHHHHhCCC-------cEEEE--eCchHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence 3333456666666665432 44555 79999999887 6667889999999999998888889999999999
Q ss_pred eeeecCCCC----CCC-----HHHHHHHHHcCCCCc--EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC
Q 012628 204 YRYYDPKTV----GLD-----FEGMIADIKAAPGGS--FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ 272 (459)
Q Consensus 204 v~~~~~~~~----~~d-----~e~l~~~i~~~~~~~--~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~ 272 (459)
++... +.+ +++ .+.+++++.+.++.. +.+++++| +=-|+++ ++++|.++|+.++ |++||||.
T Consensus 262 l~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~y---d~~~I~~~~~~~~--ilvDEAwg 334 (714)
T PRK15400 262 FRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLY---NTDFIKKTLDVKS--IHFDSAWV 334 (714)
T ss_pred ecccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEec---CHHHHHHHhCCCC--EEEEccch
Confidence 87542 232 335 899999998765322 24554333 2239995 5566777787776 68999987
Q ss_pred CCC-CCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceE
Q 012628 273 GFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (459)
Q Consensus 273 ~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 316 (459)
++. +.+.-.+..++.......+.++++.|.+|.++ |+.-+..
T Consensus 335 ah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~--alTQaS~ 377 (714)
T PRK15400 335 PYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASM 377 (714)
T ss_pred hhhccCcccCCcChhhcCCCCCCceEEEEchhhccc--chhHHhH
Confidence 654 32211112222211112245699999999974 5544443
No 350
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.45 E-value=4.4e-11 Score=127.23 Aligned_cols=299 Identities=11% Similarity=0.082 Sum_probs=177.9
Q ss_pred CCCCCC---cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh------CCCCEEEEcCCCCcch
Q 012628 120 KEYLPI---EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY------FPGAKVLISSPTWGNH 190 (459)
Q Consensus 120 ~~Y~~~---~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~------~~gd~Vlv~~p~y~~~ 190 (459)
+-|.|. +|+-++...+..++..-.|.+ ++ ..|..||+.+........+.. ...++|+++.-.+...
T Consensus 517 hPyqPe~~sqG~lq~i~elq~~l~eltGmd----~~-Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn 591 (939)
T TIGR00461 517 HPFQPSNQVEGYQELIAQLEKWLCSITGFD----AI-SLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN 591 (939)
T ss_pred CCCCchHHhHHHHHHHHHHHHHHHHHHCCC----Cc-ccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC
Confidence 455554 344444444444443333332 22 223566776665432233322 1235899999888777
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCCeeEEec
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQ-WEKIADVIQEKNHIPFFDV 269 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~-l~~i~~l~~~~~~~ii~De 269 (459)
...+..+|++++.+|. +.++.+|+++|++.+++..++++++++++|+| +|.+ ++ +++|+++|+++|.++++|.
T Consensus 592 Pasa~~~G~~Vv~V~~--d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 592 PASAAMAGMQVVPVNC--DQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred HHHHHHCCCEEEEecc--CCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEe
Confidence 7778999999999998 35678999999999986445788999999999 8998 66 9999999999999999999
Q ss_pred cCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcc----cCCCCcceEEEEeCChhHHHHHHHHHH-h---------
Q 012628 270 AYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLG----LYAERIGAMNVVCSSSDLAARVKSQLK-R--------- 335 (459)
Q Consensus 270 ay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~----~~G~RiG~~~~v~~~~~~~~~~~~~~~-~--------- 335 (459)
++.. ...... . ....+-+++++|.+|.|+ ..|-.+|++.+ .+.+...+..... .
T Consensus 666 Aq~~-al~~l~--~------Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~v---r~~L~~~lPg~~v~~t~d~~greq 733 (939)
T TIGR00461 666 ANMN-AQVGLT--S------PGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGV---KSHLIPFLPKHDVVSMITGIGGSK 733 (939)
T ss_pred cChh-hCCCCC--C------ccccCCCEEEecCCccCCCCCCCCCCCeEEEEE---hhhchhhcCCCcccccccCCCCcc
Confidence 9533 211111 0 123456788999999654 23334788865 3332111110000 0
Q ss_pred hcccc---ccCCchHHHHHHH--HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC-Ccce---
Q 012628 336 LARPM---YSNPPVHGARIVA--NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGM--- 406 (459)
Q Consensus 336 ~~~~~---~~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-~~g~--- 406 (459)
..+.. ..+...++..+.. ..+. .+.+++..+..-.+.+++.+.|. + + ++..-+ ..+.
T Consensus 734 ~Iga~s~~~~g~a~~~l~a~~yi~~lG--------~~GL~~~a~~ailnAnYl~~rL~-~-~----~~~l~~~~~~~~~h 799 (939)
T TIGR00461 734 SIGSVSAAPYGSASILPISWMYIKMMG--------NEGLPKASVVAILNANYMATRLK-D-H----YPILFVGTLKHVAH 799 (939)
T ss_pred ccccccccccCcHHHHHHHHHHHHHHC--------HHHHHHHHHHHHHHHHHHHHHhh-c-c----CcccccCCCCceeE
Confidence 00000 0011111111111 1222 24467778888888999999998 6 2 232222 1233
Q ss_pred -eee--c------CCC-HHHHHHHHhcccEEEc------CCC---cEEEccCChhhHHHHHHHHHHHHhh
Q 012628 407 -FSF--T------GLN-KAQSDNMTNKWHVYMT------KDG---RISLAGLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 407 -f~~--~------~l~-~~~~~~ll~~~gI~v~------~gg---Ris~~~~~~e~i~~~~~~l~~~~~~ 457 (459)
|++ . |.. .+..++|++ +|+... +|. +.+-.. +.++||++++++.++-++
T Consensus 800 Efv~~~~~~~~~~g~~~~dIakrL~d-~G~hapt~~~pv~g~lmiepTE~e-skeelD~f~~al~~I~~e 867 (939)
T TIGR00461 800 ECILDLRPLKAKTGIEAIDVAKRLQD-YGFHAPTLSFPVPGTLMVEPTESE-SLEELDRFCDAMIAIKEE 867 (939)
T ss_pred EEEEeccchhhhcCCCHHHHHHHHHh-CCeeccccCCccCCeEEEEeeccC-CHHHHHHHHHHHHHHHHH
Confidence 222 1 233 455778887 598641 122 445444 789999999999877654
No 351
>PLN02452 phosphoserine transaminase
Probab=99.45 E-value=4.1e-11 Score=117.17 Aligned_cols=318 Identities=14% Similarity=0.088 Sum_probs=182.2
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcC--------CCCCCCCC--cccHHHHHHHHHHHhcCCCCccccC-ce
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERG--------ENKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQ-RV 152 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~Y~~~--~g~~~lr~aia~~l~~~~~~~~~~~-~i 152 (459)
.+++|+.| +..+|+.|++++++-+.+- ...+..+. .-+.+.++.+.+++. .+ .+ +|
T Consensus 7 ~~~~f~pG-------P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~----~p--~~y~v 73 (365)
T PLN02452 7 RVFNFSAG-------PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLD----IP--DNYEV 73 (365)
T ss_pred ceEeeeCC-------CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhC----CC--CCceE
Confidence 46778755 3446899999988754210 00112111 122344444555443 21 12 34
Q ss_pred EEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcc--hHHHhhhCCCCeeeeeeec-CCCCCCCHHHHHHHHHcCCCC
Q 012628 153 ATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGN--HKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 153 ~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~--~~~~~~~~G~~v~~v~~~~-~~~~~~d~e~l~~~i~~~~~~ 229 (459)
++ ...|||.+++.+ +.+.+.+||++++..-+..+ +...++.+|...+...... .....++++++ +.. +.
T Consensus 74 ~~-l~Gsgt~~~ea~--~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~-~~ 145 (365)
T PLN02452 74 LF-LQGGASTQFAAI--PLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELT-PD 145 (365)
T ss_pred EE-EeCccHHHHHHH--HHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCC-CC
Confidence 33 267889999998 66667799988888766543 4556777886444332211 11224666664 221 24
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (459)
...+.+++....||+.++ +++++. ++++|+|.+ +.++..+.+. +..+ +.+ .|..|.+|++
T Consensus 146 ~~~v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~-Ss~g~~pidv---------~~~~-v~~-~saqK~lGP~ 205 (365)
T PLN02452 146 AKFVHICANETIHGVEFK--DYPDVG------NVPLVADMS-SNFLSKPVDV---------SKYG-VIY-AGAQKNVGPS 205 (365)
T ss_pred CcEEEECCCCCCCcEecC--cccccC------CCeEEEECC-ccccCcccCH---------HHcC-EEE-EecccccCCC
Confidence 455556666667788543 355553 389999999 7777543321 2222 333 5999999999
Q ss_pred CCCcceEEEEeCChhHHHHHHHH---H---H--hhccccccCCchHHHHHHHHHhCChhhHHHHHH-HHHHHHHHHHHHH
Q 012628 310 AERIGAMNVVCSSSDLAARVKSQ---L---K--RLARPMYSNPPVHGARIVANVVGNPALFDEWKA-EMEMMAGRIKNVR 380 (459)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~---~---~--~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~~ 380 (459)
| +|.+++ +++.++++... + . .-...++.+|+..+..+....|+ +.. ++ .++.+.++++++.
T Consensus 206 G--l~~v~v---r~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~---~l~--~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 206 G--VTIVII---RKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFE---DLL--AQGGLKAMEKRNIRKA 275 (365)
T ss_pred C--eEEEEE---cHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHH---HHH--HccCHHHHHHHHHHHH
Confidence 9 688876 66655443211 0 0 00112223455555444443332 110 12 3789999999999
Q ss_pred HHHHHHHhhcc-CCCCCccc-ccC--Ccc-eeee--cCC--CHHHHHHHHhcccEEEcCCC------cEEE-ccCChhhH
Q 012628 381 QKLFDSLSAKD-KSGKDWSF-ILR--QIG-MFSF--TGL--NKAQSDNMTNKWHVYMTKDG------RISL-AGLSLAKC 444 (459)
Q Consensus 381 ~~l~~~L~~~~-g~~~~~~~-~~~--~~g-~f~~--~~l--~~~~~~~ll~~~gI~v~~gg------Ris~-~~~~~e~i 444 (459)
+++++.|+ +. |+ +.. ..+ ... ...| .+. ..++.+.+ +++|+...+|. |+|+ ..++.+++
T Consensus 276 ~~l~~~l~-~~~G~---y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~-~~~g~~~~~G~r~~gg~R~s~yna~~~~~v 350 (365)
T PLN02452 276 DLLYDAID-ESNGF---YVCPVEKSVRSLMNVPFTLGGSELEAEFVKEA-AKAGMVQLKGHRSVGGMRASIYNAMPLAGV 350 (365)
T ss_pred HHHHHHHH-hCCCc---ccCCCChHHhCCeEEEEEcCCchhHHHHHHHH-HHCCCcccCCccccCceEEECcCCCCHHHH
Confidence 99999998 64 43 111 111 122 2222 222 23444454 45699998872 9985 44589999
Q ss_pred HHHHHHHHHHHhh
Q 012628 445 EYLADAIIDSYHN 457 (459)
Q Consensus 445 ~~~~~~l~~~~~~ 457 (459)
+.+++.+++.-++
T Consensus 351 ~~L~~~m~~f~~~ 363 (365)
T PLN02452 351 EKLVAFMKDFQAK 363 (365)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987665
No 352
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.45 E-value=7.5e-11 Score=118.71 Aligned_cols=334 Identities=11% Similarity=0.028 Sum_probs=171.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHH--HHHHHHhhcCCC--CCC--CCCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVK--KAENLMLERGEN--KEY--LPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~--~a~~~~~~~~~~--~~Y--~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+...||+..|......++. .|.|. +++.+.+..... ..+ ....-..++-+.+++... .. .-+.+.+
T Consensus 37 G~~ylD~~~g~~~~~lGh~--~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~----~~~~v~f- 108 (431)
T TIGR03251 37 GRRYLDMFSFFASMALGMN--HPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLG-DP----ALPHLFF- 108 (431)
T ss_pred CCChhhcccChhhcCCCCC--ChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcC-CC----CcCEEEE-
Confidence 4578888777653333443 67787 777776653210 011 111112233333333320 10 1357888
Q ss_pred ecccchhHHHHHHHHHHHhC------C------CCEEEEcCCCCcchHHHhh-hCCCC-e------------eeeeee--
Q 012628 156 QGLSGTGSLRLAAALIERYF------P------GAKVLISSPTWGNHKNIFN-DARVP-W------------SEYRYY-- 207 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~------~------gd~Vlv~~p~y~~~~~~~~-~~G~~-v------------~~v~~~-- 207 (459)
+++|++|++.+.++...+. . +.+|+...-+|.+...... ..|.. . +..|..
T Consensus 109 -~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~ 187 (431)
T TIGR03251 109 -IEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTF 187 (431)
T ss_pred -eCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccC
Confidence 9999999999988876552 1 3689999988876533222 22211 0 001100
Q ss_pred c--CCCCC-------CCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCC
Q 012628 208 D--PKTVG-------LDFEGMIADIKAAPGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (459)
Q Consensus 208 ~--~~~~~-------~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~ 277 (459)
+ ..... -+++.+++.+...++....+++...+.-.|.+ .+++.+++|.++|++||+++|+||++.+++..
T Consensus 188 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Grt 267 (431)
T TIGR03251 188 PLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLT 267 (431)
T ss_pred CccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCcc
Confidence 0 00000 12455556665444566677766667777865 67888999999999999999999998888653
Q ss_pred CCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHH-HHH--hhccccccCCchHHHHHHHH
Q 012628 278 SLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKS-QLK--RLARPMYSNPPVHGARIVAN 354 (459)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 354 (459)
+ ..+.... .+-.++++ .++|.+ +. .|++ . +. + +..+.. .+. .....++ +.+.++..++..
T Consensus 268 G---~~~a~~~-~gv~PDi~---~~gK~~--~~--~g~~-~--~~-~-i~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a 330 (431)
T TIGR03251 268 G---TAWAYQQ-LGVQPDIV---AFGKKT--QV--CGIM-A--GR-R-VDEVADNVFAVPSRLNSTW-GGNLVDMVRATR 330 (431)
T ss_pred c---hHHHHHh-cCCCCCEE---EecccC--cc--ceEE-e--cc-h-HHHhhhhcccCccccCCCC-CCCHHHHHHHHH
Confidence 2 2222222 22334544 468876 21 2444 2 22 2 111111 111 0112223 233333334333
Q ss_pred Hh---CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcccccCCcceeeecCC-C----HHHHHHHHhccc
Q 012628 355 VV---GNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK-SGKDWSFILRQIGMFSFTGL-N----KAQSDNMTNKWH 425 (459)
Q Consensus 355 ~L---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~g~f~~~~l-~----~~~~~~ll~~~g 425 (459)
.| .+.++ +++.++.-+..++.|.+... +++ + +..+... |.++.+.+ + ..+.+.+++ +|
T Consensus 331 ~L~~l~~~~l-------~~~~~~~g~~l~~~L~~l~~-~~~~~---i~~vrg~-G~~~~i~~~~~~~~~~~~~~l~~-~G 397 (431)
T TIGR03251 331 ILEIIEEERL-------VDNARVQGAHLLARLHELAA-EFPHL---VSNPRGR-GLMCAFDLPSTADRDEVIRQLYR-EG 397 (431)
T ss_pred HHHHHHhcCH-------HHHHHHHHHHHHHHHHHHHH-hCccc---eeccccc-ceeEEEEeCCHHHHHHHHHHHHh-CC
Confidence 33 22221 12333333333333333222 232 1 1122233 33322222 1 234556665 69
Q ss_pred EEEcCCC----cEEEcc-CChhhHHHHHHHHHHH
Q 012628 426 VYMTKDG----RISLAG-LSLAKCEYLADAIIDS 454 (459)
Q Consensus 426 I~v~~gg----Ris~~~-~~~e~i~~~~~~l~~~ 454 (459)
|.+.+.| ||+... .+++|+++++++|.++
T Consensus 398 vl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 398 VLLLGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred eEEecCCCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 9998865 765443 2899999999998763
No 353
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.43 E-value=3.1e-11 Score=125.29 Aligned_cols=172 Identities=14% Similarity=0.066 Sum_probs=113.6
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHH-hhhCCCCee
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNI-FNDARVPWS 202 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~-~~~~G~~v~ 202 (459)
|..-..+..+.+|+.++.+ +-.++ ++|+|.++..+ +.+.+.+||+|++...++-+.... +...|++++
T Consensus 172 ~eG~i~eAq~~AA~~fgAd-------~tyFl--vNGTS~gn~a~--i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PV 240 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNAD-------KTYFV--LNGTSASNKVV--TNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV 240 (720)
T ss_pred CChHHHHHHHHHHHHhCCC-------ceEEE--eCChhHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEE
Confidence 3333455666666665442 44555 89999999988 667788999999999999887774 889999999
Q ss_pred eeeeecCCCC----CCCHHH-----HHHHHHcCCCC-------cEEEEeCCCCCCC--CCCCCHHHHHHHHHH-HHhcCC
Q 012628 203 EYRYYDPKTV----GLDFEG-----MIADIKAAPGG-------SFILLHGCAHNPT--GIDPTPEQWEKIADV-IQEKNH 263 (459)
Q Consensus 203 ~v~~~~~~~~----~~d~e~-----l~~~i~~~~~~-------~~~ii~~~p~NPT--G~~~s~~~l~~i~~l-~~~~~~ 263 (459)
+++..- +.+ +++.+. ++++|++.++. .+++++ .||| |++ .++++|+++ ++.++
T Consensus 241 Yl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvi---t~pTYdG~~---ydi~~I~~~~~h~~~- 312 (720)
T PRK13578 241 YLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVI---QLGTYDGTI---YNARQVVDKIGHLCD- 312 (720)
T ss_pred Eeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEE---ECCCCccee---ecHHHHHHHhhccCC-
Confidence 987542 223 346544 88888775211 366665 4555 999 456677777 57777
Q ss_pred eeEEeccCCCCC-CCCCCCChhHHH-HHHhcCCeEEEEEcCCcCcccCCCCcceE
Q 012628 264 IPFFDVAYQGFA-SGSLDNDASSVR-LFATRGMELLVAQSYSKNLGLYAERIGAM 316 (459)
Q Consensus 264 ~ii~Deay~~~~-~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 316 (459)
.|++||||.++. +.+.-.+.+... .+..+.+.++++.|.+|.++ ++.-+..
T Consensus 313 ~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~--alTQaS~ 365 (720)
T PRK13578 313 YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA--GFSQTSQ 365 (720)
T ss_pred cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcch--hhhhHhh
Confidence 999999987654 332111122111 11122345799999999974 5555544
No 354
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.42 E-value=3.4e-11 Score=130.14 Aligned_cols=295 Identities=12% Similarity=0.077 Sum_probs=171.2
Q ss_pred ccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh--CCCC----EEEEcCCCCcchHHHhhhCCCC
Q 012628 127 GLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY--FPGA----KVLISSPTWGNHKNIFNDARVP 200 (459)
Q Consensus 127 g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~--~~gd----~Vlv~~p~y~~~~~~~~~~G~~ 200 (459)
|.-++...+.+++..-.|. +++.+ +.+||+++........+.+ .+|| +|++++..|......+...|++
T Consensus 539 G~l~~i~e~q~~l~eltG~----d~~sl-~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~ 613 (954)
T PRK05367 539 GYRELIDQLEAWLAEITGY----DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMK 613 (954)
T ss_pred HHHHHHHHHHHHHHHHHCC----CCEEE-CccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCE
Confidence 4545554444554443343 35554 3456666664442223322 3565 6999999998777888999999
Q ss_pred eeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCC
Q 012628 201 WSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD 280 (459)
Q Consensus 201 v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~ 280 (459)
++.+|++ .++.+|+++|++++++...+..++++++|++-.+.. +++++|+++|+++|+++++|.++..-... ..
T Consensus 614 vv~v~~d--~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~al~~-l~ 687 (954)
T PRK05367 614 VVVVACD--ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNAQVG-LA 687 (954)
T ss_pred EEEECCC--CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhhccC-CC
Confidence 9999984 457899999999998643456777777777653334 67999999999999999999996322111 11
Q ss_pred CChhHHHHHHhcCCeEEEEEcCCcCccc----CCCCcceEEEEeCChhHHHHHHHHHHhhc-----c---ccccCCchHH
Q 012628 281 NDASSVRLFATRGMELLVAQSYSKNLGL----YAERIGAMNVVCSSSDLAARVKSQLKRLA-----R---PMYSNPPVHG 348 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~RiG~~~~v~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~ 348 (459)
.+ ...+-+++..|.+|.|+. .|-.+|++.+ .+. +...+.... . .........+
T Consensus 688 --~p------g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~v---r~~----l~p~lpg~~v~~~~~~~~~g~v~ta~~g 752 (954)
T PRK05367 688 --RP------GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGV---KAH----LAPFLPGHPVQIAGGETGIGAVSAAPFG 752 (954)
T ss_pred --Ch------hhcCCCEEEecCcccCCCCcCCCCCceEEEee---ccc----ccccCCCCccCcCCCCCCcCcchhHHHH
Confidence 00 122456888899998642 2233778765 323 222211100 0 0111111221
Q ss_pred HHHH----HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC-----Ccceeeec------CCC
Q 012628 349 ARIV----ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-----QIGMFSFT------GLN 413 (459)
Q Consensus 349 ~~~~----~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-----~~g~f~~~------~l~ 413 (459)
+..+ ..++..-+ .+.+++..++.-.+.+++.+.|+ +. ++ +.+..+ +..+|-+. +.+
T Consensus 753 ~al~~~~a~~yi~~~G-----~~Glr~~a~~~~~~A~Yl~~~L~-~~-~~--~~~~~~~~~~~~e~i~~~~~~~~~~g~~ 823 (954)
T PRK05367 753 SASILPISWMYIRMMG-----AEGLRQATEVAILNANYIAKRLK-DH-YP--VLYTGANGRVAHECILDLRPLKESTGIT 823 (954)
T ss_pred HHHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHHH-hh-cC--ccccCCCCCcccceEEEeecccccCCCC
Confidence 1111 11111000 24456666666688899999997 53 11 122211 12233332 233
Q ss_pred -HHHHHHHHhcccEEEcC------CC-cEEEccC-ChhhHHHHHHHHHHHHhh
Q 012628 414 -KAQSDNMTNKWHVYMTK------DG-RISLAGL-SLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 414 -~~~~~~ll~~~gI~v~~------gg-Ris~~~~-~~e~i~~~~~~l~~~~~~ 457 (459)
.+..++|++ +|+...- +. ||+.+-. +++|+++++++++.+.++
T Consensus 824 ~~di~krL~d-~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 824 VDDIAKRLID-YGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred HHHHHHHHHH-CCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 345667755 6886532 22 7776543 889999999999887765
No 355
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.41 E-value=2.3e-10 Score=115.08 Aligned_cols=334 Identities=13% Similarity=0.092 Sum_probs=177.6
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHH-hhcCC--CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLM-LERGE--NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~-~~~~~--~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|+..|..-...++. +|.|.+++.+. ..... ...| ......++-+.+++.+..... -.-+.+.+ ++
T Consensus 57 G~~ylD~~sg~~~~~lGh~--~p~i~~Ai~~q~~~~~l~~~~~~-~~~~~~~la~~l~~~l~~~~p--~~~~~v~f--~~ 129 (464)
T TIGR00699 57 GNRLLDLYSQISSIPIGYN--NPALLKAAQSPEMATTLINRPAL-GNFPSKDWAKILKEGILKVAP--KGQDQVWT--GM 129 (464)
T ss_pred CCEEEEccCCHhhhcCCCC--CHHHHHHHHHHHHHHhhcccccC-CcHHHHHHHHHHHHhHHhhCC--CCcCEEEE--eC
Confidence 4578899888653333443 78899988863 22211 1122 122223344444332221110 01257888 99
Q ss_pred cchhHHHHHHHHHHHhC------------------------CC---CEEEEcCCCCcchHHHhh-hCCC-----------
Q 012628 159 SGTGSLRLAAALIERYF------------------------PG---AKVLISSPTWGNHKNIFN-DARV----------- 199 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~------------------------~g---d~Vlv~~p~y~~~~~~~~-~~G~----------- 199 (459)
+|++|++.+.++...+. +| .+|+....+|.+...... ..|-
T Consensus 130 SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~ 209 (464)
T TIGR00699 130 SGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAF 209 (464)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 99999999988875541 11 279999999876533222 1111
Q ss_pred CeeeeeeecCC-CC-----------CCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCCeeE
Q 012628 200 PWSEYRYYDPK-TV-----------GLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDP-TPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 200 ~v~~v~~~~~~-~~-----------~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~-s~~~l~~i~~l~~~~~~~ii 266 (459)
.+..+|..... .+ .-+++.+++.+...++....+|+.......|.+. +++-+++|.++|++||+++|
T Consensus 210 ~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI 289 (464)
T TIGR00699 210 DWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFI 289 (464)
T ss_pred CceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 11122221000 00 0135667777765444566666666677778766 68889999999999999999
Q ss_pred EeccCCCCCCCCCCCChhHHHHHHhc--CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCC
Q 012628 267 FDVAYQGFASGSLDNDASSVRLFATR--GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNP 344 (459)
Q Consensus 267 ~Deay~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
+||+..+++..+ ..+....+ +- .++++ +++|.++-. |+++. .+. +..........++ ..
T Consensus 290 ~DEV~tGfGrtG---~~fa~e~~-gv~~~PDi~---t~gK~lg~g----G~~~~---~~~----~~~~~~~~~~~T~-~g 350 (464)
T TIGR00699 290 VDEVQTGVGATG---KFWAHEHW-NLDDPPDMV---TFSKKFQTA----GYFFH---DPA----FRPNKPYRQFNTW-MG 350 (464)
T ss_pred EeeeeeCCCCCc---chhHHHhc-CCCCCCCEE---EehhhhccC----Ccccc---chh----ccCCCCcccccCC-CC
Confidence 999987776422 22233222 21 24443 679998623 44321 221 1110001122223 33
Q ss_pred chHHHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCccccc--CCcceeeecCC-C---
Q 012628 345 PVHGARIVA---NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDK--SGKDWSFIL--RQIGMFSFTGL-N--- 413 (459)
Q Consensus 345 ~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g--~~~~~~~~~--~~~g~f~~~~l-~--- 413 (459)
+.++..++. ..+++. ...++.+++-+++.+.|+ ++. .|..+..+. .. |+++-+.+ +
T Consensus 351 np~~~aaa~a~L~~l~~~-----------~l~~~~~~~g~~l~~~L~-~l~~~~~~~i~~vRg~G~-Glm~gie~~~~~~ 417 (464)
T TIGR00699 351 DPSRALILREIIQEIKRK-----------DLLENVAHVGDYLYTGLE-DLQKKYPEFIQNLRGKGR-GTFIAWDTPDEAK 417 (464)
T ss_pred CHHHHHHHHHHHHHHHhc-----------CHHHHHHHHHHHHHHHHH-HHHHhCCCceeeecccCe-EEEEEEecCCHHH
Confidence 333333333 233322 233444445555555555 431 111112222 23 33322222 2
Q ss_pred -HHHHHHHHhcccEEEcCCC----cEEEcc-CChhhHHHHHHHHHHHH
Q 012628 414 -KAQSDNMTNKWHVYMTKDG----RISLAG-LSLAKCEYLADAIIDSY 455 (459)
Q Consensus 414 -~~~~~~ll~~~gI~v~~gg----Ris~~~-~~~e~i~~~~~~l~~~~ 455 (459)
..+.+.+++ +||.+.+.| ||...- .++++++.++++|.+++
T Consensus 418 ~~~i~~~~~~-~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 418 RDKLLKKARN-NGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHHHHHHHH-CCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 233556666 599998765 665432 38999999999998764
No 356
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.40 E-value=3.9e-10 Score=109.85 Aligned_cols=329 Identities=12% Similarity=0.070 Sum_probs=192.4
Q ss_pred CCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchh
Q 012628 83 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 83 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
+-.|||-.-. ++.-+++...++|.. + +..|.....+.+|.+.+++++.. +.+++ |+.|++
T Consensus 41 dV~IDLrSDT-----gT~apS~~m~aAM~~----G-DD~Y~gdpSv~~Lee~vael~G~--------E~alp--thqGRg 100 (467)
T TIGR02617 41 DVFIDLLTDS-----GTGAVTQSMQAAMMR----G-DEAYSGSRSYYALAESVKNIFGY--------QYTIP--THQGRG 100 (467)
T ss_pred CeEEECccCC-----CCCCCCHHHHHHHHc----C-CcccccCchHHHHHHHHHHHhCC--------ceEEE--CCCCch
Confidence 3457776322 221126778887775 3 25687777888999999998643 44667 888999
Q ss_pred HHHHHHHHHHHhC-CCCEEEEcCC-------C-CcchHHHhhhCCCCeeeeeee--------cCCCCCCCHHHHHHHHHc
Q 012628 163 SLRLAAALIERYF-PGAKVLISSP-------T-WGNHKNIFNDARVPWSEYRYY--------DPKTVGLDFEGMIADIKA 225 (459)
Q Consensus 163 a~~l~~~~~~~~~-~gd~Vlv~~p-------~-y~~~~~~~~~~G~~v~~v~~~--------~~~~~~~d~e~l~~~i~~ 225 (459)
+..++..+ .+. |||++++..+ . |..........|+.++.++.. .+..+.+|++.++++|++
T Consensus 101 aE~Il~~~--~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~ 178 (467)
T TIGR02617 101 AEQIYIPV--LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEE 178 (467)
T ss_pred HHHHHHHh--hcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhh
Confidence 99887433 356 7887775553 2 222244567788887776432 223467899999999986
Q ss_pred CC-CCcEEEEeCCCCCC-CCCCCCHHHHHHHHHHHHhcCCeeEEeccCCC---C-------CCCCCCCChhHHHHHHhc-
Q 012628 226 AP-GGSFILLHGCAHNP-TGIDPTPEQWEKIADVIQEKNHIPFFDVAYQG---F-------ASGSLDNDASSVRLFATR- 292 (459)
Q Consensus 226 ~~-~~~~~ii~~~p~NP-TG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~---~-------~~~~~~~~~~~~~~~~~~- 292 (459)
.. ++.-.+...--||- -|.++|.+.++++.++|++||+.++.|.+-.. . ++.+ .+++.++.+
T Consensus 179 ~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~-----~si~eI~rE~ 253 (467)
T TIGR02617 179 VGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKN-----WSIEQITRET 253 (467)
T ss_pred cCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcC-----CCHHHHHHHh
Confidence 32 11111111112344 47899999999999999999999999987311 1 1211 233333211
Q ss_pred -CCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHh-hc----cccccCCchHHHHHHHHHhCChhhHHHHH
Q 012628 293 -GMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR-LA----RPMYSNPPVHGARIVANVVGNPALFDEWK 366 (459)
Q Consensus 293 -~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 366 (459)
..-+.+..|+||.++.| +|.+++ .+.+.+..+....+. .. ..++++.+.-...+.+.-|.+. ..+
T Consensus 254 ~~~aDsvt~slsKglgAp---vGg~La--g~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~-~~~--- 324 (467)
T TIGR02617 254 YKYADMLAMSAKKDAMVP---MGGLLC--FKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG-MNL--- 324 (467)
T ss_pred hccCCEEEEEcCCCCCCc---ccceEE--ecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhc-ccH---
Confidence 12345667999998866 777743 343311112222111 11 1223333333333333223321 110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecC-------CC------HHHHHHHHhcccEEEcCC--
Q 012628 367 AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTG-------LN------KAQSDNMTNKWHVYMTKD-- 431 (459)
Q Consensus 367 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~-------l~------~~~~~~ll~~~gI~v~~g-- 431 (459)
+.+..+ -...++|.+.|. +.|+ .++. .||--+|++ +. ..++-.|..+.||--..-
T Consensus 325 ---~yl~~r-i~qv~yl~~~L~-~~Gv----pi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~ 394 (467)
T TIGR02617 325 ---DWLAYR-INQVQYLVNGLE-EIGV----VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGS 394 (467)
T ss_pred ---HHHHHH-HHHHHHHHHHHH-hCCC----cEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecc
Confidence 111222 234578888888 8884 4555 666555553 22 244556666778743221
Q ss_pred ---------C----------cEEEcc--CChhhHHHHHHHHHHHHhh
Q 012628 432 ---------G----------RISLAG--LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 432 ---------g----------Ris~~~--~~~e~i~~~~~~l~~~~~~ 457 (459)
| |+++.- +|.++++++++++..+.++
T Consensus 395 ~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 395 LLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred eecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1 777652 4889999999999988765
No 357
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.40 E-value=2.5e-10 Score=120.92 Aligned_cols=301 Identities=14% Similarity=0.086 Sum_probs=173.5
Q ss_pred CCCCC---CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC-----C-CCEEEEcCCCCcch
Q 012628 120 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-----P-GAKVLISSPTWGNH 190 (459)
Q Consensus 120 ~~Y~~---~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~-----~-gd~Vlv~~p~y~~~ 190 (459)
+-|.| .+|+-++-..+.+++..-.|. +.+ .++-.+|+.+.......++... + .++|+++.-.+...
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~-Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtN 604 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGF----DAI-CMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTN 604 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeE-eecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccC
Confidence 45666 566655554444444333332 222 3334566666644433333321 2 35788888777555
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
...+...|++++.+|.+ +++.+|+++|++.+++..++++++++.+|++=.+.. +++++|+++|+++|.++++|.+
T Consensus 605 pasa~~~GieVv~Vp~D--~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA 679 (954)
T PRK12566 605 PASAQMAGMRVVIVECD--PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGA 679 (954)
T ss_pred HHHHHHCCCEEEEeccC--CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEee
Confidence 56677889999999984 356899999999998544577777777776655443 7799999999999999999999
Q ss_pred CCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC----CCCcceEEEEeCChhHHHHHHHHHHhhc---------
Q 012628 271 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY----AERIGAMNVVCSSSDLAARVKSQLKRLA--------- 337 (459)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~RiG~~~~v~~~~~~~~~~~~~~~~~~--------- 337 (459)
. ..+..... . ....+-+++.++.+|.|+.| |.-+|.+.+ .+. +...+...-
T Consensus 680 ~-~~a~~~l~--~------Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav---~~~----L~pfLp~~P~~d~~G~~~ 743 (954)
T PRK12566 680 N-LNAQVGLA--R------PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGV---RAH----LAPFVANHPVVPVEGPDP 743 (954)
T ss_pred C-hhhccCCC--C------hhhcCCCEEEecCCcccCcCccCCCCccchhhh---hhh----hhhhccCCCCcCCCCCCC
Confidence 4 43332211 0 12345688999999988522 222444322 222 222221110
Q ss_pred -cccccCCchHH---HHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCccee---e--
Q 012628 338 -RPMYSNPPVHG---ARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF---S-- 408 (459)
Q Consensus 338 -~~~~~~~~~~~---~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f---~-- 408 (459)
....++.+..+ ..++..++..-+ .+ +.+.......+.+++.+.|. +. ++ +.+..+++.+| +
T Consensus 744 r~ga~S~~~~gsa~~l~~A~~Yi~~lG-----~e-Lk~aa~~ailnAnYla~rL~-~~-~~--v~~~~~~~~~~hEfii~ 813 (954)
T PRK12566 744 NNGAVSAAPWGSASILPISWMYIAMMG-----PQ-LADASEVAILSANYLANQLG-GA-FP--VLYRGRNERVAHECILD 813 (954)
T ss_pred CCCceeecccchHHHHHHHHHHHHHHC-----HH-HHHHHHHHHHHHHHHHHHhH-hh-CC--CCcCCCCCCeeeEEEEE
Confidence 01111222211 112222221101 12 55666666678889999997 52 21 23322222211 1
Q ss_pred ec------CCC-HHHHHHHHhcccEEEc----C--CC-cEEEccC-ChhhHHHHHHHHHHHHhh
Q 012628 409 FT------GLN-KAQSDNMTNKWHVYMT----K--DG-RISLAGL-SLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 409 ~~------~l~-~~~~~~ll~~~gI~v~----~--gg-Ris~~~~-~~e~i~~~~~~l~~~~~~ 457 (459)
+. +.+ .+..++|+ ++||... | ++ ||+.+-. +++|||+++++++.+.++
T Consensus 814 ~~~l~~~~g~~~~dvakRL~-d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 814 LRPLKAQTGISEEDVAKRLM-DYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred ccccccccCCCHHHHHHHHH-HCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 11 233 34577887 4688642 2 23 8987654 889999999999988876
No 358
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=8.8e-12 Score=118.55 Aligned_cols=329 Identities=13% Similarity=0.067 Sum_probs=197.2
Q ss_pred CceeecccccCCCCC-CccCcHHHHHHHHHHhhc-C-CCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc-
Q 012628 84 KKLNLGVGAYRTEEL-QPYVLDVVKKAENLMLER-G-ENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS- 159 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~-~~~~~~~v~~a~~~~~~~-~-~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g- 159 (459)
.++|++.=+|+--.. .-+..+.+.+++...-.. . ....-+...-..++.+.+|+|+.. ++-+++ ..|
T Consensus 137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-------e~a~vF--~mGf 207 (519)
T KOG1357|consen 137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-------EDAIVF--SMGF 207 (519)
T ss_pred eeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-------cceEEE--eccc
Confidence 356666544432111 112356677776664311 0 112222334456788888999654 566766 333
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc---------C-CCC
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---------A-PGG 229 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~---------~-~~~ 229 (459)
+|.++.. -..+.||.-|+-.+-.+.....-++..|+.++-+..+ |.+.||+.+++ + +.+
T Consensus 208 ~TNs~~~----p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~k 276 (519)
T KOG1357|consen 208 ATNSMNI----PSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWK 276 (519)
T ss_pred cccccCc----ceeecCCcceeeccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcch
Confidence 2333332 2346799999998888888888888899998888773 44555555554 1 223
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH--HhcCCeEEEEEcCCcCcc
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF--ATRGMELLVAQSYSKNLG 307 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~ 307 (459)
..++++-.-..--|.+ ..+.+++.++++|..+++.||+++.-+.+. ....+..+ .+..+.++..++|.|++|
T Consensus 277 ki~iivegiysmEg~i---v~Lp~vvalkkkykayl~lDEAHSiGA~g~---tGrgvce~~g~d~~dvDImMGtftKSfg 350 (519)
T KOG1357|consen 277 KILICVEGIYSMEGTI---VDLPEVVALKKKYKAYLYLDEAHSIGAMGA---TGRGVCEYFGVDPEDVDIMMGTFTKSFG 350 (519)
T ss_pred heeeeeccceeccCee---cccHHHHHhhccccEEEEeeccccccccCC---CCcceeeccCCCchhheeecceehhhcc
Confidence 3444444444455777 778899999999999999999976554321 11122122 233457899999999999
Q ss_pred cCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHH--HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVA--NVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
..| ||+.+ +++.++.+...... .....+.++.++|+... ..+.+.+- -..-++..+++.+++.+++.
T Consensus 351 a~G---Gyiag---sk~lid~lrt~s~~-~~yat~~sppvaqq~~ssl~~i~G~dg----t~~g~~k~~~l~~ns~yfr~ 419 (519)
T KOG1357|consen 351 AAG---GYIAG---SKELIDYLRTPSPS-ALYATSLSPPVAQQILTSVKHIMGEDG----TNRGRQKIERLAENSRYFRW 419 (519)
T ss_pred ccc---ceecC---cHHHHhhhccCCCc-eeecccCChHHHHHHHHHHHhhcCCCc----ccHHHHHHHHHHhhhHHHHH
Confidence 877 88755 88844443332111 11122334555555542 22222111 12346778889999999999
Q ss_pred HHhhccCCCCCcccccCCcc----eeee-cCCCHHHHHHHHhcccEEEcCCC-----------cEEEccC-ChhhHHHHH
Q 012628 386 SLSAKDKSGKDWSFILRQIG----MFSF-TGLNKAQSDNMTNKWHVYMTKDG-----------RISLAGL-SLAKCEYLA 448 (459)
Q Consensus 386 ~L~~~~g~~~~~~~~~~~~g----~f~~-~~l~~~~~~~ll~~~gI~v~~gg-----------Ris~~~~-~~e~i~~~~ 448 (459)
.|+ +.| +.+...+.. +.++ ......+.++|+++ +|.++-.| |++.+.- +.|++++++
T Consensus 420 ~l~-~~g----fivyG~~dSpVvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l 493 (519)
T KOG1357|consen 420 ELQ-KMG----FIVYGNNDSPVVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRAL 493 (519)
T ss_pred hhh-cCc----EEEecCCCCCcceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHH
Confidence 999 887 344444433 1111 12245667788875 77665543 7776543 789999999
Q ss_pred HHHHHHH
Q 012628 449 DAIIDSY 455 (459)
Q Consensus 449 ~~l~~~~ 455 (459)
+.+.++=
T Consensus 494 ~~i~~~g 500 (519)
T KOG1357|consen 494 EVIDRVG 500 (519)
T ss_pred HHHhhhc
Confidence 8887653
No 359
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.36 E-value=2.5e-10 Score=118.48 Aligned_cols=190 Identities=11% Similarity=0.024 Sum_probs=119.3
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeee
Q 012628 124 PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSE 203 (459)
Q Consensus 124 ~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~ 203 (459)
|..-..+..+.+|+.++.+ +-.++ ++|+|.++..+ +.+.+.+||+|++...++-+....+...|+++++
T Consensus 193 ~~G~i~eAe~~aA~~fgAd-------~tyfv--vNGTS~~n~av--~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVY 261 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAE-------QSYIV--TNGTSTSNKIV--GMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIW 261 (713)
T ss_pred CChHHHHHHHHHHHHhCCC-------cEEEE--eCChHHHHHHH--HHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEE
Confidence 3333455666666665442 44555 79999999988 6667889999999999998888889999999999
Q ss_pred eeeecCCCC----CCCH-----HHHHHHHHcCCCC--cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCee-EEeccC
Q 012628 204 YRYYDPKTV----GLDF-----EGMIADIKAAPGG--SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP-FFDVAY 271 (459)
Q Consensus 204 v~~~~~~~~----~~d~-----e~l~~~i~~~~~~--~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~i-i~Deay 271 (459)
++... +.+ +++. +.+++++++.++. ++.+++++| +=-|++++. ++|+++| |+.+ ++||||
T Consensus 262 l~P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~---~~I~~~~---g~~~ilvDEAh 333 (713)
T PRK15399 262 LKPTR-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNT---DWIKQTL---DVPSIHFDSAW 333 (713)
T ss_pred ecccc-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCH---HHHHHHh---CCCEEEEeccc
Confidence 87532 222 3455 8999999876532 245555444 233999554 5566666 5655 699998
Q ss_pred CCCC-CCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHh
Q 012628 272 QGFA-SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKR 335 (459)
Q Consensus 272 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~ 335 (459)
.++. +.+.-.+..++.........++++.|.+|.+ +|+.-+..+-+.+. -..+++...+..
T Consensus 334 gah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL--~alTQaS~iHvk~~-vd~~~~n~a~~m 395 (713)
T PRK15399 334 VPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKML--AAFSQASLIHIKGE-YDEETFNEAFMM 395 (713)
T ss_pred hhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccc--cccchheeeeecCC-CCHHHHHHHHHH
Confidence 7654 3221111222211001223566799999997 46666655433332 223455555544
No 360
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.33 E-value=1e-10 Score=115.12 Aligned_cols=282 Identities=13% Similarity=0.050 Sum_probs=165.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCcccc-----CceEEeecccchhHHHHHHHHHHHh-C--
Q 012628 104 DVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKE-----QRVATVQGLSGTGSLRLAAALIERY-F-- 175 (459)
Q Consensus 104 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~-----~~i~~~~t~ggt~a~~l~~~~~~~~-~-- 175 (459)
..+-+.+...++.+ ...|.......++.+.+.+++....|.+-+. ..=++ |+|||+++..+....+.. .
T Consensus 54 ~i~~~~l~~~~n~n-~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~--t~Ggt~anl~al~aAR~~~~~~ 130 (373)
T PF00282_consen 54 SILADLLASALNQN-GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVF--TSGGTEANLYALLAARERALPR 130 (373)
T ss_dssp HHHHHHHHHHHT-B-TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEE--ESSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccc-ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeE--eccchHHHHHHHHHHHHHHhhh
Confidence 33444555555443 2455545566778888888887777765211 23445 899999998874333221 0
Q ss_pred ---CC-----C-EEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC---CCCcEEEEeCCCCCCCC
Q 012628 176 ---PG-----A-KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTG 243 (459)
Q Consensus 176 ---~g-----d-~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~ii~~~p~NPTG 243 (459)
.| + .|++++-++......+..+|..++.||++ +++.+|+++|++.+.+. .....+|+.+.....||
T Consensus 131 ~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~--~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G 208 (373)
T PF00282_consen 131 SKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTD--EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTG 208 (373)
T ss_dssp HHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BB--TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred hhhcccccccccccccccccccHHHHhcceeeeEEEEecCC--cchhhhHHHhhhhhcccccccccceeeeccCCCcccc
Confidence 12 2 56777768888899999999999999995 36899999999988652 11244566677899999
Q ss_pred CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHh-cCCeEEEEEcCCcCcccCCCCcceEEEEeCC
Q 012628 244 IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVVCSS 322 (459)
Q Consensus 244 ~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~ 322 (459)
.+ +++++|+++|+++++|+++|.+|.+...-.. ..+.+.. ...-+-+..+++|.++.| +..|++ ..++
T Consensus 209 a~---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~-----~~~~~~~gi~~adSit~d~HK~l~~P-~~~~~~--l~r~ 277 (373)
T PF00282_consen 209 AI---DPLEEIADICEKYNIWLHVDAAYGGSALLSP-----EYRHLLFGIERADSITIDPHKWLGVP-YGCGVL--LVRD 277 (373)
T ss_dssp BB----SHHHHHHHHHHCT-EEEEEETTGGGGGGHC-----TTGGGGTTGGGESEEEEETTTTTS-S-SS-EEE--EESS
T ss_pred cc---cCHHHHhhhccccceeeeecccccccccccc-----cccccccccccccccccchhhhhcCC-ccceeE--Eeec
Confidence 99 9999999999999999999999988332100 1111111 112345667999999854 668887 4566
Q ss_pred hhHHHHHH----HHHHhhc---------cccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012628 323 SDLAARVK----SQLKRLA---------RPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 389 (459)
Q Consensus 323 ~~~~~~~~----~~~~~~~---------~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 389 (459)
+....... ..+.... .......+. ...++..++.-..+- .+.+++..++..+..+++.+.|+
T Consensus 278 ~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G---~~G~~~~i~~~~~~a~~l~~~l~- 352 (373)
T PF00282_consen 278 KSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLG---REGYRERIRRCIELARYLADRLR- 352 (373)
T ss_dssp GGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ccchHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHH-
Confidence 65322111 0010000 000111222 333332221100011 35567888888889999999999
Q ss_pred ccCCCCCccccc-CCcceeee
Q 012628 390 KDKSGKDWSFIL-RQIGMFSF 409 (459)
Q Consensus 390 ~~g~~~~~~~~~-~~~g~f~~ 409 (459)
+.+. ++++. +.-+..+|
T Consensus 353 ~~~~---~el~~~~~~~~vcF 370 (373)
T PF00282_consen 353 KDPR---FELVNEPDLNIVCF 370 (373)
T ss_dssp TSTT---EEESSTTSSSEEEE
T ss_pred hCCC---EEEEcCCCceEEEE
Confidence 7642 55543 44444433
No 361
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.30 E-value=1.4e-09 Score=102.13 Aligned_cols=334 Identities=14% Similarity=0.127 Sum_probs=183.9
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc--CCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeeccc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER--GENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLS 159 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~g 159 (459)
+...+|+..|..--.-++. .|+|.+++.+.+.. .....|.. .-..++.++++..+-+. -+.+++ +++
T Consensus 49 G~ryLD~f~Gi~tvslGHc--hP~v~~a~~kQl~~l~H~t~~~~~-~pi~~~Ae~L~s~~P~~------l~~vfF--~ns 117 (442)
T KOG1404|consen 49 GRRYLDAFGGIVTVSLGHC--HPDVVAAAVKQLKKLYHTTSGYLN-PPIHDLAEALVSKLPGD------LKVVFF--VNS 117 (442)
T ss_pred CceeehhhCCeEEEEcCCC--ChHHHHHHHHhhhhhEEeeccccC-CcHHHHHHHHHHhCCCC------ceEEEE--ecC
Confidence 3456666666542222332 68888888776633 12234532 33467888888886554 245777 999
Q ss_pred chhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHh-hhCCCCeeeeeee----------cCC----CCCCC---------
Q 012628 160 GTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIF-NDARVPWSEYRYY----------DPK----TVGLD--------- 215 (459)
Q Consensus 160 gt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~-~~~G~~v~~v~~~----------~~~----~~~~d--------- 215 (459)
|++|++++.++.......-.++....+|.+..... ..-|......++. .++ -|+=+
T Consensus 118 GsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~ 197 (442)
T KOG1404|consen 118 GSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRY 197 (442)
T ss_pred CchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHH
Confidence 99999999877665555557787788876543322 2222222211110 000 00001
Q ss_pred HHHHHHHHHcC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcC
Q 012628 216 FEGMIADIKAA-PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRG 293 (459)
Q Consensus 216 ~e~l~~~i~~~-~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~ 293 (459)
.+++++.+... +.....+|.-+.+---|++ +++--+++..++|+++|.++|.||+..+|+--+ ..|+.... +--
T Consensus 198 a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG---~~wgfe~h-~v~ 273 (442)
T KOG1404|consen 198 AKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG---HMWGFESH-GVV 273 (442)
T ss_pred HHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc---cccccccc-CCC
Confidence 13444444332 3334455545555555755 566679999999999999999999988887432 34433221 111
Q ss_pred CeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHH
Q 012628 294 MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMA 373 (459)
Q Consensus 294 ~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 373 (459)
++++ |++|.+| .|+.+|.++. .+|..+-+.+... ...++.+ +.++..++...|+ .. + -+++.
T Consensus 274 PDIv---TmAKgiG-nG~Pl~AVvt---t~EIa~v~~~~~~--~fnTygg-nP~a~avg~aVL~---Vi---k--ee~Lq 335 (442)
T KOG1404|consen 274 PDIV---TMAKGIG-NGFPLGAVVT---TPEIADVLNQKSS--HFNTYGG-NPVACAVGLAVLK---VI---K--EENLQ 335 (442)
T ss_pred ccHH---HHHhhcc-CCCcceeeec---CHHHHHHHHhccc--cccccCC-CchhHHHHHHHHH---HH---H--HHhHH
Confidence 2333 8999999 8999999866 7783333332221 1223322 2333333333332 11 1 13455
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC----------CH-----HHHHHHHhcccEEEcCCC------
Q 012628 374 GRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL----------NK-----AQSDNMTNKWHVYMTKDG------ 432 (459)
Q Consensus 374 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l----------~~-----~~~~~ll~~~gI~v~~gg------ 432 (459)
++.++.-.+|.+.|. ++.- ..+.+..--|--+++|+ .+ .++-.-.+++|+.+-.||
T Consensus 336 E~aa~vG~yl~~~l~-~l~d--~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vf 412 (442)
T KOG1404|consen 336 ENAAEVGSYLLEKLA-ALKD--KHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVF 412 (442)
T ss_pred HHHHHHHHHHHHHHH-HHhh--cCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEE
Confidence 555666677777776 5521 11223222222233322 11 223344455799997776
Q ss_pred cEEEc-cCChhhHHHHHHHH
Q 012628 433 RISLA-GLSLAKCEYLADAI 451 (459)
Q Consensus 433 Ris~~-~~~~e~i~~~~~~l 451 (459)
||+-. ++|.||++.+++..
T Consensus 413 riaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 413 RIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EecCCeeccHHHHHHHHHHH
Confidence 88632 34899997766644
No 362
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.29 E-value=7.8e-10 Score=107.17 Aligned_cols=317 Identities=16% Similarity=0.075 Sum_probs=174.9
Q ss_pred ceeecccccCCCCCCccCcHHHHHHHHHHhhcCC--------CCCCCCC--cccHHHHHHHHHHHhcCCCCccccCceEE
Q 012628 85 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGE--------NKEYLPI--EGLAAFNKVTAELLFGADNSVLKEQRVAT 154 (459)
Q Consensus 85 ~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~~~--~g~~~lr~aia~~l~~~~~~~~~~~~i~~ 154 (459)
.++|+.| +..+|++|++.+++.+.+-. ..+.++. .-+.+.++.+.+++ +.+- .-+|++
T Consensus 5 ~~nF~aG-------Pa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll----~~P~-~y~Vlf 72 (364)
T PRK12462 5 QLNFSGG-------PGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLL----GIPD-EYGVVF 72 (364)
T ss_pred cceecCC-------CcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHh----CCCC-CCeEEE
Confidence 5677755 34468889888886653211 0112111 11123333333333 3211 123444
Q ss_pred eecccchhHHHHHHHHHHHhCCCCEEE--EcCCCCc-chHHHhhhCCCCeeeeeeec--CCCCCCCHHHHHHHHHcCCCC
Q 012628 155 VQGLSGTGSLRLAAALIERYFPGAKVL--ISSPTWG-NHKNIFNDARVPWSEYRYYD--PKTVGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 155 ~~t~ggt~a~~l~~~~~~~~~~gd~Vl--v~~p~y~-~~~~~~~~~G~~v~~v~~~~--~~~~~~d~e~l~~~i~~~~~~ 229 (459)
...|||++++.+ .++.+.+||+++ +..-.|. .+...++.+| ++..+.... +.+..++++.+ +.. +.
T Consensus 73 -l~GggT~~~ea~--~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~~~-~d 143 (364)
T PRK12462 73 -LQGGSSLQFSMI--PMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----DWD-AR 143 (364)
T ss_pred -EeccHHHHHHHH--HHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----ccC-CC
Confidence 256689999998 677778999665 4444443 3455666777 554443211 11234455554 221 23
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY 309 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 309 (459)
...+.++.-...||+.++ ++.+.++.++|+|.+ +.+...+.+ ++.. .++..|.-|++|+|
T Consensus 144 ~~~v~~t~NETstGv~~~--------~~~~~~~~llvvD~s-S~~~s~pid---------~~~~--dvi~agsQKnlgP~ 203 (364)
T PRK12462 144 APFRHYVSNETVEGLQFP--------DAAGLPDSPLIADMS-SDFMSRPFD---------VEAY--GMVYAHAQKNLGPA 203 (364)
T ss_pred CcEEEEccCCCCceEecC--------cccccCCCeEEEEcC-chhhCCCCC---------hHHc--cEEEeeccccCCCC
Confidence 445555555666688875 223346899999999 777644322 1222 56667788999999
Q ss_pred CCCcceEEEEeCChhHHHHHHHH-------HHhh-ccccccCCchHHHHHHHHHhCChhhHHHHHH--HHHHHHHHHHHH
Q 012628 310 AERIGAMNVVCSSSDLAARVKSQ-------LKRL-ARPMYSNPPVHGARIVANVVGNPALFDEWKA--EMEMMAGRIKNV 379 (459)
Q Consensus 310 G~RiG~~~~v~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~--~~~~~~~~~~~~ 379 (459)
| ++.+++ +++.+++.... .... ...++.+||.....++...|+ +.. ++ .++.+.++.+++
T Consensus 204 G--ltvviv---s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~---~i~--~e~GGl~~~~~r~~~k 273 (364)
T PRK12462 204 G--VTVAII---RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLR---WIR--DEIGGVHAMRDINARK 273 (364)
T ss_pred c--eEEEEE---CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHH---HHH--HhccCHHHHHHHHHHH
Confidence 8 566655 66655543321 1111 122333555555555543331 110 23 478889999999
Q ss_pred HHHHHHHHhhccC-CCCCcccc-cC--CcceeeecC-----CCHHHHHHHHhcccEEEcCC-----C-cEEEcc-CChhh
Q 012628 380 RQKLFDSLSAKDK-SGKDWSFI-LR--QIGMFSFTG-----LNKAQSDNMTNKWHVYMTKD-----G-RISLAG-LSLAK 443 (459)
Q Consensus 380 ~~~l~~~L~~~~g-~~~~~~~~-~~--~~g~f~~~~-----l~~~~~~~ll~~~gI~v~~g-----g-Ris~~~-~~~e~ 443 (459)
.+.+++.+. +.+ + +... .+ ..-+-+... ++.+|++.+- ++|+....| | |+|+-. .+.|.
T Consensus 274 a~~ly~~id-~~~~~---~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a~-~~gl~~lkGhr~vgg~Ras~yna~~~e~ 348 (364)
T PRK12462 274 AAMLYATLD-ALNEV---IDCHAHRAARSTMNVAFRFRQPRLDTLFKEQST-EAGFCGLSGHRSIGGIRASLYNAVSEQA 348 (364)
T ss_pred HHHHHHHHH-hCCCc---ccCCCChhhcCcceEEEEcCCHHHHHHHHHHHH-HCCCccccCCcccCceEEEcCCCCCHHH
Confidence 999999999 764 2 1111 11 111111111 2334444444 469988776 3 998654 48888
Q ss_pred HHHHHHHHHHHHhh
Q 012628 444 CEYLADAIIDSYHN 457 (459)
Q Consensus 444 i~~~~~~l~~~~~~ 457 (459)
++.+++-+++.-++
T Consensus 349 v~~L~~fm~~f~~~ 362 (364)
T PRK12462 349 VSRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888877654
No 363
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.29 E-value=9.6e-10 Score=109.81 Aligned_cols=184 Identities=17% Similarity=0.081 Sum_probs=125.7
Q ss_pred cHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeee
Q 012628 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYY 207 (459)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~ 207 (459)
..+..+..|+.+..+ ...++ ++|.+.|+..+ +.+.+.+||+|+++.+++-+....+...|+.++++...
T Consensus 72 i~eAqe~aA~~fgAd-------~tyFv--vNGTS~ank~v--i~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~ 140 (557)
T COG1982 72 IKEAQELAARVFGAD-------HTYFV--VNGTSTANKAV--INAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPS 140 (557)
T ss_pred HHHHHHHHHHHhCCC-------ceEEE--ECCccHHHHHH--HHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCC
Confidence 456666667775442 44555 79999999988 67778899999999999988888888999999987754
Q ss_pred cCC----CCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCC
Q 012628 208 DPK----TVGLDFEGMIADIKAAPGGSFILLHGCAHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDN 281 (459)
Q Consensus 208 ~~~----~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT--G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~ 281 (459)
.+. -++++.+.+++++.+.+...+++++ .||| |++++ +++|.+.+.+.++|+.+|++.. ...+-.+
T Consensus 141 ~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vi---tnpTYdGv~~n---~~~i~~~~~~~~a~v~~deah~-~~~~~~~- 212 (557)
T COG1982 141 RNPLYGIIGGIPLETFKEALLAHPDAEKLAVI---TNPTYDGVCYN---LRKIVELLHHYGAWVLYDEAHP-AHFDFSP- 212 (557)
T ss_pred CCccccccCCCCHHHHHHHHHhChhhheeEEE---ecCccceEeec---HHHHHHHHhhcCceEEhhhcCc-ccccccc-
Confidence 333 2477999999998876554255554 6787 99954 5568888899999999999943 3322110
Q ss_pred ChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCC-hhHHHHHHHHHHh
Q 012628 282 DASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSS-SDLAARVKSQLKR 335 (459)
Q Consensus 282 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~-~~~~~~~~~~~~~ 335 (459)
..+ ......+.+++..|.+|.++ ++.-+-.+-+..+ .-..+++...+..
T Consensus 213 ~l~---~~~~~~~~~~~tqS~HK~l~--alSQaS~iHv~~~~~~~~~r~nea~~~ 262 (557)
T COG1982 213 MLP---ESALNGGADFVTQSTHKLLA--ALSQASMIHVKDGRAVNHERFNEALMM 262 (557)
T ss_pred cCc---chhhhcCceEEEechhhhhh--hhhhhHHHhhCCCccCCHHHHHHHHHH
Confidence 011 11233568999999999975 4444444322221 2224456665554
No 364
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.29 E-value=5e-09 Score=111.70 Aligned_cols=343 Identities=13% Similarity=0.106 Sum_probs=179.8
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhH
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGS 163 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a 163 (459)
..+|+..|......+. ...|++.+++.+.+.+-. +-..+.. ..+-...+|+.+....+.. .-++|++ +.+|++|
T Consensus 366 ~ylD~~sg~w~~~lG~-h~~p~I~~Ai~~Qa~rl~-hv~~~~~-~hepa~~LAe~L~~~~~~~-~l~rVff--s~sGSeA 439 (817)
T PLN02974 366 QQFDACASWWTQGPDP-TLQPELARAVAYAAGRYG-HVMFPEN-VHEPALRAAELLLGGPGKG-WASRVFF--SDNGSTA 439 (817)
T ss_pred eEEEcchhHHHhCCCc-CCCHHHHHHHHHHHhhCC-ccccCcc-CCHHHHHHHHHHHhccCCC-CCCEEEE--CCchHHH
Confidence 4677777654222221 127889999988876521 1111111 1233344555543321100 0257999 9999999
Q ss_pred HHHHHHHHHH-hC--C----------------CCEEEEcCCCCcchHHH-hhhCCC---------C-----eeee--eee
Q 012628 164 LRLAAALIER-YF--P----------------GAKVLISSPTWGNHKNI-FNDARV---------P-----WSEY--RYY 207 (459)
Q Consensus 164 ~~l~~~~~~~-~~--~----------------gd~Vlv~~p~y~~~~~~-~~~~G~---------~-----v~~v--~~~ 207 (459)
++.+.++... +. . ..+||....+|.+..-- +...|- . ...+ |..
T Consensus 440 vE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~ 519 (817)
T PLN02974 440 IEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519 (817)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcc
Confidence 9999988743 31 1 24699999888753221 111110 0 0001 110
Q ss_pred ---c-------CCC-----------CC-----CC------------HHHHHHHHHc-----CCCCcEEEEeCC-CCCCCC
Q 012628 208 ---D-------PKT-----------VG-----LD------------FEGMIADIKA-----APGGSFILLHGC-AHNPTG 243 (459)
Q Consensus 208 ---~-------~~~-----------~~-----~d------------~e~l~~~i~~-----~~~~~~~ii~~~-p~NPTG 243 (459)
. +.. |. +| .+.+++.+.. .+++...+|+.. .+.-.|
T Consensus 520 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGG 599 (817)
T PLN02974 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGG 599 (817)
T ss_pred ccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCC
Confidence 0 000 00 01 2456666652 123445555444 366678
Q ss_pred CC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCC-CCcceEEEEeC
Q 012628 244 ID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGAMNVVCS 321 (459)
Q Consensus 244 ~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~~~v~~ 321 (459)
.+ +++.-+++|.++|++||+++|.||++.+|+--+ ..+.... .+-.++++ .++|.++ .| +.+|.+++
T Consensus 600 mi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG---~~fa~e~-~gv~PDIi---~~gKgLt-gG~~Plaa~l~--- 668 (817)
T PLN02974 600 MLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLG---VESAWEL-LGCKPDIA---CYAKLLT-GGLVPLAATLA--- 668 (817)
T ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeecccCCCccc---chhhHHh-cCCCCCEE---eeccccc-CCCCccEEEEE---
Confidence 76 467889999999999999999999999996432 2233322 23345555 5899998 78 58999877
Q ss_pred ChhHHHHHHHHHH--h-hccccccCCchHHHHHH---HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH----HHHhhcc
Q 012628 322 SSDLAARVKSQLK--R-LARPMYSNPPVHGARIV---ANVVGNPALFDEWKAEMEMMAGRIKNVRQKLF----DSLSAKD 391 (459)
Q Consensus 322 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~L~~~~ 391 (459)
+++..+.+...-. . .+..++ +.+.++..++ ..+++++++.+.| .+.-++..+++. +.|. ++
T Consensus 669 ~~~I~~~f~~~~~~~~~~hg~Ty-~gnpl~cAaala~L~~~~~~~~~~~l-------~~~~~~l~~~l~~~l~~~l~-~~ 739 (817)
T PLN02974 669 TEEVFEAFRGPSKLDALLHGHSY-TAHPMGCAAAAKALQWYKDPSTNPNL-------IPPGSRLRELWDEELVRAIS-SL 739 (817)
T ss_pred cHHHHHhhccccccCCcccCCCC-CcCHHHHHHHHHHHHHHHcccHHHHH-------HHHHHHHHHHHHHHHHHHHh-hC
Confidence 7785554431100 1 122333 3333333333 3345554443222 222233333333 3333 33
Q ss_pred CCCCCcccccCCcceeee--cC------C----CHHHHHHHHhcccEEEcCCC---cEEEc-cCChhhHHHHHHHHHHHH
Q 012628 392 KSGKDWSFILRQIGMFSF--TG------L----NKAQSDNMTNKWHVYMTKDG---RISLA-GLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 392 g~~~~~~~~~~~~g~f~~--~~------l----~~~~~~~ll~~~gI~v~~gg---Ris~~-~~~~e~i~~~~~~l~~~~ 455 (459)
+. +.-+...|-++.. .. . ...+.+.++.++||.+++.| |+... ..+++++++++++|.+.+
T Consensus 740 p~---V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 740 PN---VERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLGNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CC---eeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 21 1222223222211 11 0 11234556525799999976 44322 238899999999998765
No 365
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.28 E-value=1.1e-09 Score=118.61 Aligned_cols=306 Identities=11% Similarity=0.052 Sum_probs=183.0
Q ss_pred eecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCc---------ccHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---------GLAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~---------g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
-++.|.| .. .+|+.|.+.+.+. ..+...|.|.+ -+.++++.++++..-. ..++.+ +
T Consensus 80 ~ig~G~y----~~-~~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~------~anaSl--~ 144 (954)
T PRK05367 80 YIGQGYY----GT-HTPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLE------IANASL--L 144 (954)
T ss_pred ccCCCCC----CC-cCcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCC------hhhccc--c
Confidence 4577776 22 3466665544442 23345666633 3356778888886432 677888 8
Q ss_pred ccchhHHHHHHHHHHHhCC--CCEEEEcCCCCcchHHHh----hhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcE
Q 012628 158 LSGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIF----NDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~~--gd~Vlv~~p~y~~~~~~~----~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 231 (459)
.++|.+.+.+...+ .+.+ +|+|++++-.|+.....+ +..|++++.+|..+ |++ . +.+.
T Consensus 145 d~aTAa~ea~~~a~-~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~------d~~-------~--~~~~ 208 (954)
T PRK05367 145 DEATAAAEAMALAK-RVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK------ALD-------H--DDVF 208 (954)
T ss_pred ccHHHHHHHHHHhh-hhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc------CCC-------c--ccEE
Confidence 89999988764333 2445 489999999998877654 56799999998732 111 1 2444
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC-----c
Q 012628 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN-----L 306 (459)
Q Consensus 232 ~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-----~ 306 (459)
.+++.+| |-+|.+ +++++|+++|+++|+++++|.....+.... + ..+.+-+++++|..|. |
T Consensus 209 ~vlvq~p-~~~G~i---~d~~~i~~~ah~~Gal~~vda~~~Al~~l~---~-------pge~GaDi~vgs~qkfg~P~g~ 274 (954)
T PRK05367 209 GVLLQYP-GTSGEV---RDYTALIAAAHARGALVAVAADLLALTLLT---P-------PGEMGADIAVGSAQRFGVPMGF 274 (954)
T ss_pred EEEEecC-CCCeee---ccHHHHHHHHHHcCCEEEEEehhhhccCCC---C-------hhhcCCCEEEeeCcccCCCCCC
Confidence 4554444 788999 679999999999999999987532343211 1 1344567888888997 6
Q ss_pred ccCCCCcceEEEEeCChhHHHHHHHHHHhh--------------------cccc--ccCCchHHHHH--HHHHhCChhhH
Q 012628 307 GLYAERIGAMNVVCSSSDLAARVKSQLKRL--------------------ARPM--YSNPPVHGARI--VANVVGNPALF 362 (459)
Q Consensus 307 ~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~--------------------~~~~--~~~~~~~~~~~--~~~~L~~~~~~ 362 (459)
|-|| .|++++ .+++...+.-.+... ++.. +++..+ .|.. +...+ --.+.
T Consensus 275 GGP~--aGflav---r~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict-~qaL~a~~a~~-y~~~~ 347 (954)
T PRK05367 275 GGPH--AAYFAV---RDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICT-AQVLLAVMASM-YAVYH 347 (954)
T ss_pred CCCC--EEEEEE---CHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccch-HHHHHHHHHHH-HHHHH
Confidence 6565 899876 555332221110000 0000 111111 1111 11000 00010
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCC-cceeee-cCCCH-HHHHHHHhcccEEEcCC--C--cEE
Q 012628 363 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQ-IGMFSF-TGLNK-AQSDNMTNKWHVYMTKD--G--RIS 435 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~-~g~f~~-~~l~~-~~~~~ll~~~gI~v~~g--g--Ris 435 (459)
. .+.++++.++...+..++.+.|+ +.| +++..+. .+.+.+ .+.+. +..++|++ +||.+..- + |||
T Consensus 348 g--~~Gl~~Ia~~~~~la~~l~~~L~-~~G----~~~~~~~~f~~~~~~~~~~~~~i~~~l~~-~gi~~~~~~~~~l~is 419 (954)
T PRK05367 348 G--PEGLKAIARRVHRLAAILAAGLR-ALG----LEVVHDSFFDTLTVEVGGDAAAVLARALA-AGINLRRVDDDHVGIS 419 (954)
T ss_pred h--hhhHHHHHHHHHHHHHHHHHHHH-hcC----cccCCCCCCCeEEEeCCCCHHHHHHHHHH-CCceeccccCCEEEEE
Confidence 0 24578889999999999999998 766 3433221 122222 22244 44556665 59988543 2 888
Q ss_pred EccC-ChhhHHHHHHHHH
Q 012628 436 LAGL-SLAKCEYLADAII 452 (459)
Q Consensus 436 ~~~~-~~e~i~~~~~~l~ 452 (459)
+... |+++|+.++++|.
T Consensus 420 ~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 420 LDETTTREDLAALLAVFG 437 (954)
T ss_pred ecccCCHHHHHHHHHHHc
Confidence 8765 7899999999996
No 366
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.26 E-value=2e-09 Score=100.95 Aligned_cols=204 Identities=21% Similarity=0.212 Sum_probs=119.7
Q ss_pred cHHHHHHHHHHhh-c---CCCCCCC-CCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCC
Q 012628 103 LDVVKKAENLMLE-R---GENKEYL-PIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG 177 (459)
Q Consensus 103 ~~~v~~a~~~~~~-~---~~~~~Y~-~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~g 177 (459)
...|++|+++.-- . ....+|+ ...|=+.+.+-.|+.+.. ++-++=.|..+||.|+.++ ++..++||
T Consensus 26 q~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfga-------E~ALVRpq~vSGTHAi~~~--Lfg~LrpG 96 (403)
T PF06838_consen 26 QLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGA-------EDALVRPQFVSGTHAIALA--LFGVLRPG 96 (403)
T ss_dssp HHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT--------SEEEEETTS-SHHHHHHHH--HHHH--TT
T ss_pred HHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCc-------hhhhhcccccchHHHHHHH--HHhcCCCC
Confidence 3556677665321 1 1112332 233545555555665433 2334445678999999998 78889999
Q ss_pred CEEEEcC-CCCcchHHH----------hhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEe-CCCCCCCCCC
Q 012628 178 AKVLISS-PTWGNHKNI----------FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLH-GCAHNPTGID 245 (459)
Q Consensus 178 d~Vlv~~-p~y~~~~~~----------~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~-~~p~NPTG~~ 245 (459)
|+.+... .-|.....+ ++..|.+...+|+. +++.+|++.+++++++ +++++.+ =+-..-+=..
T Consensus 97 D~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~--~dg~~D~~~i~~~~~~---~tk~v~IQRSrGYs~R~s 171 (403)
T PF06838_consen 97 DELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLT--EDGTIDWEAIKKALKP---NTKMVLIQRSRGYSWRPS 171 (403)
T ss_dssp -EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B---TTSSB-HHHHHHHHHT---TEEEEEEE-S-TTSSS--
T ss_pred CeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeec--CCCCcCHHHHHHhhcc---CceEEEEecCCCCCCCCC
Confidence 9988655 334333433 34567888899984 4678999999999996 6666654 3333334445
Q ss_pred CCHHHHHHHHHHHHh--cCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCc--ceEEEEeC
Q 012628 246 PTPEQWEKIADVIQE--KNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERI--GAMNVVCS 321 (459)
Q Consensus 246 ~s~~~l~~i~~l~~~--~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri--G~~~~v~~ 321 (459)
++.++++++++++++ .++++++|++|.+|.... ++. .-.-+++.+|+=|+.| .|+-- ||+++
T Consensus 172 l~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~---EP~-------~vGADl~aGSLIKNpG-GgiAptGGYIaG--- 237 (403)
T PF06838_consen 172 LTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ---EPT-------EVGADLMAGSLIKNPG-GGIAPTGGYIAG--- 237 (403)
T ss_dssp --HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS----GG-------GGT-SEEEEETTSGGG-TTT-SS-EEEEE---
T ss_pred CCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc---Ccc-------ccchhheeccceeCCC-CCccCcCCEEec---
Confidence 788999999999986 589999999999998531 111 1235799999999986 44321 77655
Q ss_pred ChhHHHHHHHHHH
Q 012628 322 SSDLAARVKSQLK 334 (459)
Q Consensus 322 ~~~~~~~~~~~~~ 334 (459)
.+++.++...++.
T Consensus 238 r~~lVe~~a~RLT 250 (403)
T PF06838_consen 238 RKDLVERAAYRLT 250 (403)
T ss_dssp SHHHHHHHHHHHS
T ss_pred hHHHHHHHHhhhc
Confidence 8887777665553
No 367
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.23 E-value=6.3e-10 Score=108.49 Aligned_cols=221 Identities=16% Similarity=0.110 Sum_probs=127.0
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCC---CCCcccHHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEY---LPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y---~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
+...+|+..|.--..-+.. +|.+.+++++.+.... +.. ....-..+|-+.+.+.... ..+++.+ +.
T Consensus 15 G~~~lD~~~~~~~~~lGh~--~p~i~~ai~~~~~~~~-~~~~~~~~~~~~~~la~~L~~~~p~------~~~~v~f--~~ 83 (339)
T PF00202_consen 15 GREYLDFMSGYGSVNLGHN--HPEIAEAIAEQANKLN-YVSFSGFTHPEAAELAEKLAELFPG------GLDRVFF--AN 83 (339)
T ss_dssp SEEEEESSHHHHTTTT-BT---HHHHHHHHHHHHHCS-SCSTTTSEEHHHHHHHHHHHHHSST------TEEEEEE--ES
T ss_pred CCEEEECCCCccceecCCC--ccccchhHHHHhhhcc-cccccceeccchhhhhhhhhhcccc------ccceeee--cc
Confidence 3468898877542233433 6889999988876532 111 1122223444444444311 1468888 99
Q ss_pred cchhHHHHHHHHHH------HhCCCCEEEEcCCCCcchHHH-hh------------hCCCCeeeeeeecCCC---CCCCH
Q 012628 159 SGTGSLRLAAALIE------RYFPGAKVLISSPTWGNHKNI-FN------------DARVPWSEYRYYDPKT---VGLDF 216 (459)
Q Consensus 159 ggt~a~~l~~~~~~------~~~~gd~Vlv~~p~y~~~~~~-~~------------~~G~~v~~v~~~~~~~---~~~d~ 216 (459)
+|++|++.+.++.. ......+|+....+|.+.... +. .....+..+|..+... ..-..
T Consensus 84 sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 163 (339)
T PF00202_consen 84 SGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACL 163 (339)
T ss_dssp SHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHH
Confidence 99999999988876 333557999999888753221 11 1111334555521100 00001
Q ss_pred HHHHHHHHc-CCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCC
Q 012628 217 EGMIADIKA-APGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGM 294 (459)
Q Consensus 217 e~l~~~i~~-~~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~ 294 (459)
+.+++.+.+ ..+....+|+...+...|.. ++++-+++|.++|++||+++|.||++.+++-.+ ..+.... ....+
T Consensus 164 ~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG---~~~a~~~-~gv~P 239 (339)
T PF00202_consen 164 NALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTG---KFFASEH-YGVDP 239 (339)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTS---SSSGHHH-HTSSS
T ss_pred HHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccC---Cccceec-ccccC
Confidence 113332221 11344555554455555654 567779999999999999999999999885332 2233322 34445
Q ss_pred eEEEEEcCCcCcccCCCCcceEEEEeCChh
Q 012628 295 ELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (459)
Q Consensus 295 ~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~ 324 (459)
+++ +++|.++ .|+.+|.+.+ +++
T Consensus 240 Div---~~gK~l~-gG~p~sav~~---~~~ 262 (339)
T PF00202_consen 240 DIV---TFGKGLG-GGLPISAVLG---SEE 262 (339)
T ss_dssp SEE---EEEGGGG-TTSSEEEEEE---EHH
T ss_pred ccc---ccccchh-hhhhcccccc---cch
Confidence 555 4579999 7899999876 666
No 368
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.21 E-value=4.1e-09 Score=113.83 Aligned_cols=311 Identities=12% Similarity=0.053 Sum_probs=180.8
Q ss_pred eecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCC-----cc----cHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI-----EG----LAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-----~g----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
.++.|.| .. .+|+.|.+.+.+...- ...|+|. +| +.++++.|+++..-. ++++.+ +
T Consensus 107 fiG~G~y----~~-~~P~~v~~~i~~~~~~--~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~------~anaSL--~ 171 (993)
T PLN02414 107 YIGMGYY----NT-HVPPVILRNILENPGW--YTQYTPYQAEIAQGRLESLLNYQTMITDLTGLP------MSNASL--L 171 (993)
T ss_pred ccCCCCC----Cc-cCCHHHHHHHHhChHH--HhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCC------hhhEee--c
Confidence 3456665 22 2477777777665421 2344442 23 567888889886433 788999 9
Q ss_pred ccchhHHHHHHHHHHHhCCC--CEEEEcCCCCcchHHHhh----hCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcE
Q 012628 158 LSGTGSLRLAAALIERYFPG--AKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~~g--d~Vlv~~p~y~~~~~~~~----~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 231 (459)
.++|.+.+.+.... .+.+| |+|++++..|+.+...++ ..|++++.+|..+ . + ... +...
T Consensus 172 d~aTAaaea~~~a~-~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~-~----~------~~~---~~v~ 236 (993)
T PLN02414 172 DEGTAAAEAMAMCN-NILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD-F----D------YSS---GDVC 236 (993)
T ss_pred CChHHHHHHHHHHH-hcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh-h----c------ccc---CceE
Confidence 99999999874332 24544 789999999998876664 4688999888731 1 1 011 1233
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCccc---
Q 012628 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL--- 308 (459)
Q Consensus 232 ~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~--- 308 (459)
.+++ ..-|-+|.+ .++++|+++|+++|+++++ .+ +.++..... + ....+.++++++..|..++
T Consensus 237 ~vlv-q~P~~~G~v---~dv~~I~~~ah~~GaL~iV-aa-d~lal~~l~----~----pge~GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 237 GVLV-QYPATDGEV---LDYAEFVKNAHANGVKVVM-AT-DLLALTMLK----P----PGEWGADIVVGSAQRFGVPMGY 302 (993)
T ss_pred EEEE-ecCCCCeEE---cCHHHHHHHHHHcCCEEEE-EE-CHHHhcCCC----C----HhhccCcEEEECCCccccCCCC
Confidence 3332 122348999 7788999999999999999 44 333332221 0 1234567889999998722
Q ss_pred CCCCcceEEEEeCChhHHHHHHHHHHhh--------------------ccccccCCchH---HHHHHHHHhCChhhHHHH
Q 012628 309 YAERIGAMNVVCSSSDLAARVKSQLKRL--------------------ARPMYSNPPVH---GARIVANVVGNPALFDEW 365 (459)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~---~~~~~~~~L~~~~~~~~~ 365 (459)
.|-+.|++++ .++....+...+... .+......+.. +..++.... .-.+..
T Consensus 303 GGP~aGflav---r~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~-y~~~~g-- 376 (993)
T PLN02414 303 GGPHAAFLAT---SQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAM-YAVYHG-- 376 (993)
T ss_pred CCCCeeEEEE---CHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHH-HHHHhc--
Confidence 2345899876 555322111000000 00000011111 111111100 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC-Ccceeee-cCCCHHHHHHHHhcccEEEcCC--C--cEEEccC
Q 012628 366 KAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-QIGMFSF-TGLNKAQSDNMTNKWHVYMTKD--G--RISLAGL 439 (459)
Q Consensus 366 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-~~g~f~~-~~l~~~~~~~ll~~~gI~v~~g--g--Ris~~~~ 439 (459)
...++++.++..++..++.+.|. +.| +++..+ ..+.|.+ ++-+.+..++|.+ +||.++.. + |+|+...
T Consensus 377 ~~Gl~~Ia~ri~~la~~l~~~L~-~~G----~~~~~~~~f~~vt~~~~~~~~v~~~L~~-~gI~l~~~~~~~lrvs~~e~ 450 (993)
T PLN02414 377 PEGLKTIAQRVHGLAGVFAAGLK-KLG----FQVQSLPFFDTVKVKCSDADAIADAAAK-VGINLRVVDANTVTVSFDET 450 (993)
T ss_pred cccHHHHHHHHHHHHHHHHHHHh-hcC----CccCCCCCcCeEEEecCCHHHHHHHHHH-CCCeeEEecCCeEEEEeecc
Confidence 13467888999999999999998 876 344322 2223332 2323344556655 59877543 3 8888765
Q ss_pred -ChhhHHHHHHHHHH
Q 012628 440 -SLAKCEYLADAIID 453 (459)
Q Consensus 440 -~~e~i~~~~~~l~~ 453 (459)
|++||+.++++|..
T Consensus 451 ~T~edId~L~~~l~~ 465 (993)
T PLN02414 451 TTLEDVDKLFKVFAG 465 (993)
T ss_pred CCHHHHHHHHHHHcc
Confidence 78999999999963
No 369
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.16 E-value=2.4e-08 Score=103.09 Aligned_cols=164 Identities=10% Similarity=0.041 Sum_probs=114.8
Q ss_pred CcHHHHHHH-HHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC--C--
Q 012628 102 VLDVVKKAE-NLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--P-- 176 (459)
Q Consensus 102 ~~~~v~~a~-~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~--~-- 176 (459)
.++.+...+ ......+ ...|....+...+.+.+.+++.+..|.+- ..=.+ |+|||.|+..+..+.+... |
T Consensus 95 ~~paila~~~a~~~N~n-~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~--TsGGT~ANl~aL~~AR~~k~~p~a 169 (608)
T TIGR03811 95 LMPAILAYNYAMLWNGN-NVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHI--VADGSLANLEGLWYARNIKSLPFA 169 (608)
T ss_pred CHHHHHHHHHHHHhCCC-CCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEE--eCChHHHHHHHHHHHHHhhhccch
Confidence 345555443 3333332 24454455666777777777777666542 22235 8999999988754443321 1
Q ss_pred ----------------------------------------------CC------EEEEcCCCCcchHHHhhhCCC---Ce
Q 012628 177 ----------------------------------------------GA------KVLISSPTWGNHKNIFNDARV---PW 201 (459)
Q Consensus 177 ----------------------------------------------gd------~Vlv~~p~y~~~~~~~~~~G~---~v 201 (459)
|. +++++.-.+..+...+...|. .+
T Consensus 170 ~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~v 249 (608)
T TIGR03811 170 MKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQV 249 (608)
T ss_pred hhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccE
Confidence 00 577877778888889999998 48
Q ss_pred eeeeeecCCCCCCCHHHHHHHHHc---CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH---HhcCC--eeEEeccCCC
Q 012628 202 SEYRYYDPKTVGLDFEGMIADIKA---APGGSFILLHGCAHNPTGIDPTPEQWEKIADVI---QEKNH--IPFFDVAYQG 273 (459)
Q Consensus 202 ~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~---~~~~~--~ii~Deay~~ 273 (459)
+.||+ ++++++|++.|++.|++ ....+..|+-+.....+|.+ +++++|+++| +++|+ ++++|.||.+
T Consensus 250 v~Vpv--D~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG 324 (608)
T TIGR03811 250 IPVPV--DSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGG 324 (608)
T ss_pred EEeec--CCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccc
Confidence 89999 45789999999999864 22234556667789999999 8999999988 67887 6999999998
Q ss_pred CC
Q 012628 274 FA 275 (459)
Q Consensus 274 ~~ 275 (459)
+.
T Consensus 325 ~~ 326 (608)
T TIGR03811 325 YG 326 (608)
T ss_pred hh
Confidence 63
No 370
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.06 E-value=4.4e-08 Score=90.11 Aligned_cols=308 Identities=13% Similarity=0.104 Sum_probs=178.6
Q ss_pred cHHHHHHHHHHhhcCC---CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC----
Q 012628 103 LDVVKKAENLMLERGE---NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF---- 175 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~---~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~---- 175 (459)
.|.+.+++++..+.-. ..-|- .-..++.+-+.+++. -+-++. ++-|.+|.+.+.++.+.+.
T Consensus 77 hpki~~aLqeq~~kLtlssrafYn--d~~~~f~~~vt~lf~--------~~kvlp--mnTGaEa~Eta~KLaR~wgy~~K 144 (427)
T KOG1402|consen 77 HPKIIKALQEQADKLTLSSRAFYN--DVLGEFAEYVTKLFG--------YDKVLP--MNTGAEAVETACKLARKWGYRKK 144 (427)
T ss_pred CHHHHHHHHHHHhHhhhhhHHHhh--hhHHHHHHHHHHhcC--------cceeee--cccchhHHHHHHHHHHHHHHhhc
Confidence 7889999888765310 11232 223466677777642 245666 6777999999988887653
Q ss_pred --CCC-EEEEc-CCCCcch-H---------HHhhhCC----CCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCC
Q 012628 176 --PGA-KVLIS-SPTWGNH-K---------NIFNDAR----VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (459)
Q Consensus 176 --~gd-~Vlv~-~p~y~~~-~---------~~~~~~G----~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~ 237 (459)
|.+ .+++. .-+|.+- . ...+.+| ..+..+|+ -|.++|+.++++ +..+.+++-.
T Consensus 145 ~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eale~~l~~--~~vaaFivEP 215 (427)
T KOG1402|consen 145 NIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEALEVALKS--PNVAAFIVEP 215 (427)
T ss_pred cCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHHHHHhcC--CCeeEEEeec
Confidence 423 33333 3333211 1 1122222 12344444 178999999987 4667777677
Q ss_pred CCCCCCCCCC-HHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCC-CCcce
Q 012628 238 AHNPTGIDPT-PEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYA-ERIGA 315 (459)
Q Consensus 238 p~NPTG~~~s-~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~ 315 (459)
-+-.-|++.+ +.-+++..++|.+|++++|.||+..+++-.+ ..+.+.. -+-.++++. |.|.++ .| +.+..
T Consensus 216 IQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTG---k~la~d~-env~PDivi---lgKalS-GG~~Pvsa 287 (427)
T KOG1402|consen 216 IQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTG---KLLACDY-ENVRPDIVI---LGKALS-GGVYPVSA 287 (427)
T ss_pred cccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccC---cEEEeeh-hhcCCCeEE---Eecccc-CCeeeeEE
Confidence 7888897654 5569999999999999999999988877432 2222211 122334443 568776 44 33444
Q ss_pred EEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--
Q 012628 316 MNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKS-- 393 (459)
Q Consensus 316 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-- 393 (459)
+.. +.+ +...++......+.+-+.++.+++.+.| ++.. -+...++.+.+-+.|++.|. ++..
T Consensus 288 vl~---~~~----im~~~~pgeHgsTyggNpLg~~vaiAal---evi~-----eekL~era~~lG~~l~~~L~-~l~~~~ 351 (427)
T KOG1402|consen 288 VLA---DDD----IMLNIKPGEHGSTYGGNPLGCAVAIAAL---EVIV-----EEKLVERAAKLGEILRDQLN-KLQKKF 351 (427)
T ss_pred EEe---cHH----HHhccCCCccccccCCChHHHHHHHHHH---HHHH-----HHHHHHHHHHHHHHHHHHHH-hccccc
Confidence 433 666 4444444333333344555555554443 2211 14566777778888888888 7642
Q ss_pred CCCcccccCCcceeeecCC-----C-HHH--HHHHHhcccEEEcCCC----cEEEc-cCChhhHHHHHHHHHHHHh
Q 012628 394 GKDWSFILRQIGMFSFTGL-----N-KAQ--SDNMTNKWHVYMTKDG----RISLA-GLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 394 ~~~~~~~~~~~g~f~~~~l-----~-~~~--~~~ll~~~gI~v~~gg----Ris~~-~~~~e~i~~~~~~l~~~~~ 456 (459)
|+-++.+.. -|++.-+-+ + .+. +-..+++.|+..-|-. |++-. .++++++++.+++|.+.+.
T Consensus 352 p~~v~~VRG-rGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 352 PHVVKEVRG-RGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cchhheeec-cceEEEEEeccccccchhHHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 111122222 245433211 2 222 2244455688877753 77633 2389999999999998764
No 371
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.05 E-value=2.5e-07 Score=86.20 Aligned_cols=311 Identities=12% Similarity=0.061 Sum_probs=184.2
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHh---CCCCEEEEcCCCCcc-hHHHhh
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERY---FPGAKVLISSPTWGN-HKNIFN 195 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~---~~gd~Vlv~~p~y~~-~~~~~~ 195 (459)
..|.-..++..|++++.+.+. -+.++. |+-|.+|-++...++... .||.+..+++..|+. .....+
T Consensus 73 EAYagsrs~~~L~~avkdifG--------fq~~iP--thQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~ 142 (471)
T COG3033 73 EAYAGSRSYYALADAVKDIFG--------FQYTIP--THQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ 142 (471)
T ss_pred hhhcccccHHHHHHHHHHhcC--------ceeeee--ccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH
Confidence 568888889999999998863 255666 788888777764443221 167777777766653 445566
Q ss_pred hCCCCeeeeeeecCC--------CCCCCHHHHHHHHHcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCee
Q 012628 196 DARVPWSEYRYYDPK--------TVGLDFEGMIADIKAAPG--GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (459)
Q Consensus 196 ~~G~~v~~v~~~~~~--------~~~~d~e~l~~~i~~~~~--~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~i 265 (459)
..|+.++-+++++.. -+.+|++.|+..|++... .+.+++..+.|.-.|.-.|.+.++++.++|++|++.+
T Consensus 143 ~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipv 222 (471)
T COG3033 143 INGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPV 222 (471)
T ss_pred hcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcE
Confidence 788888877764322 235799999999988432 3344444445666799999999999999999999999
Q ss_pred EEeccCC-CCCCC----CCCCChhHHHHHHhcC--CeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhh--
Q 012628 266 FFDVAYQ-GFASG----SLDNDASSVRLFATRG--MELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL-- 336 (459)
Q Consensus 266 i~Deay~-~~~~~----~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~-- 336 (459)
+.|.+-. +-.|. ......|++.....+. -.+-+.-|..|.- +.- +|.+.+ ..++...+-........
T Consensus 223 v~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~-lvn--mGGfl~-~~D~~~fDvy~~~~~~~V~ 298 (471)
T COG3033 223 VMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDG-LVN--MGGFLC-FKDDSFFDVYEECRTLVVV 298 (471)
T ss_pred EeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccc-eec--cccEEE-ecCccHHHHHHHHHhheEe
Confidence 9998731 11110 1112345555443211 0122334777763 222 455533 23332211122111111
Q ss_pred cc--ccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCcceeeecCC--
Q 012628 337 AR--PMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-- 412 (459)
Q Consensus 337 ~~--~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l-- 412 (459)
.. .++++...-...+.+.-|.+. ... ...++--+..++|.+.|. +.| +.++.|.||--+|++.
T Consensus 299 ~eG~~tYGgl~GrdmealAvGL~e~-~~~-------~yl~~Rv~Qv~YL~~~l~-~~G----Vpi~~paGGHavfvda~~ 365 (471)
T COG3033 299 QEGFPTYGGLAGRDMEALAVGLREG-VNF-------DYLAHRVAQVQYLADGLE-EAG----VPIVQPAGGHAVFVDAGK 365 (471)
T ss_pred eccccccCcccchhHHHHHHHHHHh-cCc-------HHHHHHHHHHHHHHHHHH-hcC----CeeEecCCCceEEeehhh
Confidence 11 122233332222222222211 111 111222335678899999 888 4677888886666642
Q ss_pred -----------CHHHHHHHHhcccEEEcCCC---------------------cEEEc--cCChhhHHHHHHHHHHHHhh
Q 012628 413 -----------NKAQSDNMTNKWHVYMTKDG---------------------RISLA--GLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 413 -----------~~~~~~~ll~~~gI~v~~gg---------------------Ris~~--~~~~e~i~~~~~~l~~~~~~ 457 (459)
...++-.|.++.||-.+.-| |+++. .++.+.++.++++++++.++
T Consensus 366 ~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 366 FLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred hcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 12445677788899665432 77764 34788999999999988764
No 372
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.97 E-value=1.1e-09 Score=93.10 Aligned_cols=65 Identities=18% Similarity=0.302 Sum_probs=57.4
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCC--CccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCc
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADN--SVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWG 188 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~--~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~ 188 (459)
..|.+..|.++||+++|+|+.+.+| ..+++++|++ |.|++++++++ +...+.|||.|++++|+|+
T Consensus 86 a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivv--t~Ga~~al~~l--~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 86 ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVL--SAGATAANEII--MFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEE--cCCHHHHHHHH--HHHHcCCCCEEEEeCCCCC
Confidence 3488889999999999999988877 6788999999 99999999998 4444789999999999996
No 373
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.95 E-value=1.3e-07 Score=91.04 Aligned_cols=275 Identities=14% Similarity=0.118 Sum_probs=159.1
Q ss_pred ecccchhHHHHHHHHHHHhC---CC---CEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCC
Q 012628 156 QGLSGTGSLRLAAALIERYF---PG---AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~---~g---d~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 229 (459)
.|.|+|+++.++-+-..... .| ..++++.-....+....+.++.++..||++ +.++.+|+..+.+.+++ +
T Consensus 143 ~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~-~~~~~~D~~k~~~~i~e---N 218 (491)
T KOG1383|consen 143 GTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLD-EGDYRVDPGKVVRMIDE---N 218 (491)
T ss_pred cccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeecc-ccceEecHHHHHHHhcc---c
Confidence 38999999555422222111 12 356666666667777888889999999996 47899999999999997 8
Q ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh-cCCeeEEeccCCCCCCC--CCCCChhHHHHHHhcCCeEE-EEEcCCc-
Q 012628 230 SFILLHGCAHNPTGIDPTPEQWEKIADVIQE-KNHIPFFDVAYQGFASG--SLDNDASSVRLFATRGMELL-VAQSYSK- 304 (459)
Q Consensus 230 ~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~-~~~~ii~Deay~~~~~~--~~~~~~~~~~~~~~~~~~~i-~~~S~SK- 304 (459)
++.++...|+.|+|.. +++++|.++..+ +++.+.+|.+-.+|.-. ......+.+ ..+.+- ...+-+|
T Consensus 219 ti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdF-----r~p~V~Sisa~~HKY 290 (491)
T KOG1383|consen 219 TIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDF-----RVPGVTSISADGHKY 290 (491)
T ss_pred eEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccccCcccccc-----CCCCceeEeecccee
Confidence 9999988999999999 999999999999 99999999997777641 111111110 011111 1122333
Q ss_pred CcccCCCCcceEEEEeCChhHHH-HHH---HHHHhhccccccCCchH-----HHHHHHHHhCChhhHHHHHHHHHHHHHH
Q 012628 305 NLGLYAERIGAMNVVCSSSDLAA-RVK---SQLKRLARPMYSNPPVH-----GARIVANVVGNPALFDEWKAEMEMMAGR 375 (459)
Q Consensus 305 ~~~~~G~RiG~~~~v~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~-----~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 375 (459)
.+.++| +||+ +-+++++.. .+. +.+.......+.+-+.. +|.++..-|...+| .+..++
T Consensus 291 Gl~~~G--~~~v--l~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY--------~~~~~~ 358 (491)
T KOG1383|consen 291 GLAPAG--SSWV--LYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGY--------RENTQN 358 (491)
T ss_pred eeeecC--cEEE--EEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHH--------HHHHHH
Confidence 355566 7998 445555210 000 00111111112222222 22222222333333 455566
Q ss_pred HHHHHHHHHHHHhhccCCCCCcccc-cCCcceeeecC--CCHHHHHHHHhcccEEEcC----CC-cEEEccC--ChhhHH
Q 012628 376 IKNVRQKLFDSLSAKDKSGKDWSFI-LRQIGMFSFTG--LNKAQSDNMTNKWHVYMTK----DG-RISLAGL--SLAKCE 445 (459)
Q Consensus 376 ~~~~~~~l~~~L~~~~g~~~~~~~~-~~~~g~f~~~~--l~~~~~~~ll~~~gI~v~~----gg-Ris~~~~--~~e~i~ 445 (459)
+.+....|.+.++ +.+ ++..+ .|.-.+.+|-. ++.-.+..+|.++|-.+.. .+ -|++.-. .++--+
T Consensus 359 ive~~~~l~egie-~i~---~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~~A~ 434 (491)
T KOG1383|consen 359 IVETARKLREGIE-NIK---GIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHAREDVAD 434 (491)
T ss_pred HHHHHHHHHHhhh-ccc---cceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccCCCCceEEEEEeeeccHHHHH
Confidence 7777778888888 653 13333 34444444432 2322244555556775532 23 3443321 233346
Q ss_pred HHHHHHHHHHhhc
Q 012628 446 YLADAIIDSYHNV 458 (459)
Q Consensus 446 ~~~~~l~~~~~~~ 458 (459)
.++.-|+++++++
T Consensus 435 ~~v~Di~~~~~el 447 (491)
T KOG1383|consen 435 RFVADIRKVVEEL 447 (491)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777777764
No 374
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.91 E-value=6.9e-08 Score=87.68 Aligned_cols=319 Identities=14% Similarity=0.136 Sum_probs=166.8
Q ss_pred cHHHHHHHHHHhh-cCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEE
Q 012628 103 LDVVKKAENLMLE-RGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVL 181 (459)
Q Consensus 103 ~~~v~~a~~~~~~-~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vl 181 (459)
.|+|.++....+. ...+.++.. .++.+....+....-+ -+-+++ +++|++|+.++.++.+.+..-.-||
T Consensus 63 hp~VV~A~~kQmat~~tN~RFlh----d~lv~cA~~l~stlPe----Lsvc~F--~NSGSEANDLALRLAR~ftkhqDvI 132 (452)
T KOG1403|consen 63 HPEVVRAGAKQMATISTNNRFLH----DELVQCARTLTSTLPE----LSVCFF--VNSGSEANDLALRLARNFTKHQDVI 132 (452)
T ss_pred CHHHHHHHHHHHhHhcccchhhH----HHHHHHHHHHhhcCCC----ceEEEE--ecCCchhhHHHHHHHHhhcccCceE
Confidence 5666666554442 222344532 2344433333322211 133556 9999999999988888887666677
Q ss_pred EcCCCCcchHHHhh-------hCCC---Ceeeeeeec-CCCC---------------CCCHHHHHHHHHc---CCCCcEE
Q 012628 182 ISSPTWGNHKNIFN-------DARV---PWSEYRYYD-PKTV---------------GLDFEGMIADIKA---APGGSFI 232 (459)
Q Consensus 182 v~~p~y~~~~~~~~-------~~G~---~v~~v~~~~-~~~~---------------~~d~e~l~~~i~~---~~~~~~~ 232 (459)
+.+-.|.++..... ..|. ++.++.+-+ ++.+ ..-.+.+++.+.+ ...+...
T Consensus 133 tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA 212 (452)
T KOG1403|consen 133 TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA 212 (452)
T ss_pred EEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence 77877776643321 1121 112221110 0000 0112333333333 2223334
Q ss_pred EEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCC
Q 012628 233 LLHGCAHNPTGIDPTPE-QWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE 311 (459)
Q Consensus 233 ii~~~p~NPTG~~~s~~-~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 311 (459)
++-.+-+.=-|.++++. -.+.+++..+.+|-+.|.||+.-+|+-- ....|+...+ +-.++++ ++.|-+| .|.
T Consensus 213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRv--G~hyWafq~y-~fiPDIV---tmgKpmG-NGh 285 (452)
T KOG1403|consen 213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRV--GSHYWAFQTY-NFIPDIV---TMGKPMG-NGH 285 (452)
T ss_pred HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccccc--chhhhhhhhh-ccccchh---eecccCC-CCC
Confidence 44334444557666555 4899999999999999999997777643 2455654332 2223333 6889999 899
Q ss_pred CcceEEEEeCChhHHHHHHHHHHhhcccccc-CCchHHHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 012628 312 RIGAMNVVCSSSDLAARVKSQLKRLARPMYS-NPPVHGARI-VANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSA 389 (459)
Q Consensus 312 RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 389 (459)
.++.++. .++..+.+...-.. ...+++ +|.+.+... +...++++. ..++.++.-++|...|+
T Consensus 286 PVa~Vat---tkeIA~Af~atgv~-YFNTyGGnPVsCAv~laVm~v~e~E~-----------Lq~ha~~vG~~L~~lL~- 349 (452)
T KOG1403|consen 286 PVAAVAT---TKEIAQAFHATGVE-YFNTYGGNPVSCAVGLAVMRVCEDEN-----------LQEHAQQVGEKLEVLLR- 349 (452)
T ss_pred eeeEEec---cHHHHHHhccccce-ehhccCCCchhHHHHHHHHHHHhhhh-----------HHHHHHHHHHHHHHHHH-
Confidence 9999754 77744443321111 112232 333322221 233333332 23333333444444444
Q ss_pred ccCCCCCcccccCCcceeeecCC-----------CH----HHHHHHHhcccEEEcCCC------cEE-EccCChhhHHHH
Q 012628 390 KDKSGKDWSFILRQIGMFSFTGL-----------NK----AQSDNMTNKWHVYMTKDG------RIS-LAGLSLAKCEYL 447 (459)
Q Consensus 390 ~~g~~~~~~~~~~~~g~f~~~~l-----------~~----~~~~~ll~~~gI~v~~gg------Ris-~~~~~~e~i~~~ 447 (459)
++... .+++..--|.-+|+|+ +. ..+.+|.+.++|.+...| .|- -.+.++++.+++
T Consensus 350 ~~k~k--h~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~ 427 (452)
T KOG1403|consen 350 RLKQK--HECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEF 427 (452)
T ss_pred HHhhh--ccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHH
Confidence 33211 2444443333344432 11 225577788899998887 221 112288999999
Q ss_pred HHHHHHHHh
Q 012628 448 ADAIIDSYH 456 (459)
Q Consensus 448 ~~~l~~~~~ 456 (459)
+..|.+++.
T Consensus 428 v~~ld~iLT 436 (452)
T KOG1403|consen 428 VLGLDEILT 436 (452)
T ss_pred HHHHHHHHH
Confidence 988888774
No 375
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.90 E-value=5.3e-07 Score=86.60 Aligned_cols=234 Identities=17% Similarity=0.099 Sum_probs=145.4
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCcccHHHHH-HHHHHHhcCCCCccccCceEEeecccchh
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNK-VTAELLFGADNSVLKEQRVATVQGLSGTG 162 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~-aia~~l~~~~~~~~~~~~i~~~~t~ggt~ 162 (459)
.+||++.-.-+...+....++++.+++...+.......|.-..|...-|- .+++.+.+-.+ .+.+++ ++..+.
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~----aea~~i--vnnn~a 94 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTG----AEAAAI--VNNNAA 94 (395)
T ss_pred hhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccc----hhheee--ECCcHH
Confidence 45665543333344445558999999998886543345544444322222 34444433322 355666 677777
Q ss_pred HHHHHHHHHHHhCCCCEEEEcC-----CCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEE-eC
Q 012628 163 SLRLAAALIERYFPGAKVLISS-----PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILL-HG 236 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~-----p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii-~~ 236 (459)
++.++ ...+.++.+|++.. ++.++...+++..|++++++-.. ..-...+++.+|.+ ++.+++ +-
T Consensus 95 AVll~---~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne---~ta~llkV~ 164 (395)
T COG1921 95 AVLLT---LNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINE---NTALLLKVH 164 (395)
T ss_pred HHHHH---HhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhcc---CCeeEEEEe
Confidence 77776 33455555666544 47778899999999999998653 34688999999997 565555 43
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceE
Q 012628 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (459)
Q Consensus 237 ~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 316 (459)
+.|. |.. +.=..++++++|++||+++++|.+-..... ..+.++.++.. +-+++++|-.|.++ |-+-|.+
T Consensus 165 s~~~--~f~-~~l~~~~l~~ia~~~~lpvivD~aSg~~v~-----~e~~l~~~la~-GaDLV~~SgdKllg--GPqaGii 233 (395)
T COG1921 165 SSNY--GFT-GMLSEEELVEIAHEKGLPVIVDLASGALVD-----KEPDLREALAL-GADLVSFSGDKLLG--GPQAGII 233 (395)
T ss_pred eccc--ccc-ccccHHHHHHHHHHcCCCEEEecCCccccc-----cccchhHHHhc-CCCEEEEecchhcC--CCccceE
Confidence 3443 332 112355688999999999999999433321 12234444443 35688889999986 7778887
Q ss_pred EEEeCChhHHHHHHHHHHhhccccccCCchHHH
Q 012628 317 NVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA 349 (459)
Q Consensus 317 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (459)
++ .+++++++.+. .+.+.+-...+.++.
T Consensus 234 ~G---kKelI~~lq~~--~l~Ralrv~K~tla~ 261 (395)
T COG1921 234 VG---KKELIEKLQSH--PLKRALRVDKETLAA 261 (395)
T ss_pred ec---hHHHHHHHHhh--hhhhhhhcCcHhHHH
Confidence 66 88977666553 233344445555543
No 376
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.85 E-value=6e-07 Score=82.77 Aligned_cols=285 Identities=12% Similarity=0.065 Sum_probs=167.9
Q ss_pred HHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC--CCCEEEEcCCC-Ccc----hHHHhhhCCCCee
Q 012628 130 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PGAKVLISSPT-WGN----HKNIFNDARVPWS 202 (459)
Q Consensus 130 ~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~--~gd~Vlv~~p~-y~~----~~~~~~~~G~~v~ 202 (459)
.+-..+|-++... +.++++ +.+.+--++-. +.+.++ +|++||+++-. |+. ....++..|..
T Consensus 80 ~lgdklApLiGA~------~~Evvv--~dtts~nl~k~--L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-- 147 (407)
T COG3844 80 RLGDKLAPLIGAR------AGEVVV--TDTTSINLFKV--LAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-- 147 (407)
T ss_pred HHHHHhhhhhcCC------CCceEE--eCCcchHHHHH--HHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc--
Confidence 4556666666554 678877 55444333333 555555 68999998843 322 22233333322
Q ss_pred eeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCC
Q 012628 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDND 282 (459)
Q Consensus 203 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~ 282 (459)
+.+ ...+.++++++++++ .+.+++++.+|.-||.. -++.+|-.+++++|++++.|-+++.-...
T Consensus 148 -~~~----~~~~~P~~~~~~~~d---d~AvV~L~~V~y~TGql---~dm~aiT~~AH~~galv~wDLAHsaGavp----- 211 (407)
T COG3844 148 -YDL----EGVIAPRALEEAITD---DVAVVLLSHVNYKTGQL---LDMRAITALAHQHGALVGWDLAHSAGAVP----- 211 (407)
T ss_pred -ccc----eeeeChHHHHHhhcc---ceEEEEeccccccccce---eeHHHHHHHHHhcCceEEeehhcccCCcc-----
Confidence 111 234567899999987 88899999999999999 56778999999999999999997655432
Q ss_pred hhHHHHHHhcCCeEEEEEcCCcCcc-cCCCCcceEEEEeCChhHHHHHHHHHH-------------------hhcccccc
Q 012628 283 ASSVRLFATRGMELLVAQSYSKNLG-LYAERIGAMNVVCSSSDLAARVKSQLK-------------------RLARPMYS 342 (459)
Q Consensus 283 ~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~~~v~~~~~~~~~~~~~~~-------------------~~~~~~~~ 342 (459)
..+...+-++-+++-.|-+. -||- .+++.+ .+...++....+. ...+...+
T Consensus 212 -----~~Lh~~gaDfaigcsyKYLNgGPGa-pa~l~v---~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~g 282 (407)
T COG3844 212 -----VDLHAAGADFAIGCSYKYLNGGPGA-PAGLFV---APRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCG 282 (407)
T ss_pred -----eeecccCCCeeeeeeceeccCCCCC-ceeEEe---ccccccccccccccccCCCCcchhhhccCcCccccceeeC
Confidence 11223445677778888773 2443 555544 3332222211111 11122233
Q ss_pred CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccC-----CcceeeecCCC-HHH
Q 012628 343 NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILR-----QIGMFSFTGLN-KAQ 416 (459)
Q Consensus 343 ~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~-----~~g~f~~~~l~-~~~ 416 (459)
+++.++..+....|.- .. +-.+.+.|++--.+.+++.+.++ ..-.-.+++...| .|+-..+..-. .+.
T Consensus 283 t~~V~s~aal~~aLDi---fa--~~~i~~lR~kSlaLTd~fieLvE-a~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V 356 (407)
T COG3844 283 TQPVLSLAALEGALDI---FA--DVDITELRKKSLALTDYFIELVE-ARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQV 356 (407)
T ss_pred CcchhhhHHHhhhhhh---hh--hcCHHHHHHhhhHHHHHHHHHHH-hccccCCcEEeccchhhhccceeeEecCcHHHH
Confidence 4444444444333321 11 12267777777778888888877 4311011344433 23333333223 344
Q ss_pred HHHHHhcccEEEc--CCC--cEEEccC--ChhhHHHHHHHHHHHHhhc
Q 012628 417 SDNMTNKWHVYMT--KDG--RISLAGL--SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 417 ~~~ll~~~gI~v~--~gg--Ris~~~~--~~e~i~~~~~~l~~~~~~~ 458 (459)
.+.|.+ +||... +-+ |+.|+.+ +-+++-..++.|.++++++
T Consensus 357 ~qaLi~-rGVigD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 357 MQALID-RGVIGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred HHHHHH-cCccccccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 556666 699752 223 9988765 6789999999999999865
No 377
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.83 E-value=3e-06 Score=81.26 Aligned_cols=299 Identities=14% Similarity=0.118 Sum_probs=173.1
Q ss_pred CCCCC---CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC--CC----CEEEEcCCCCcch
Q 012628 120 KEYLP---IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PG----AKVLISSPTWGNH 190 (459)
Q Consensus 120 ~~Y~~---~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~--~g----d~Vlv~~p~y~~~ 190 (459)
+-|.| .+|+.++-..+.+|+..--|. +.|.+ |-+.|.++-..-..++..+. .| +.||||+..+...
T Consensus 96 HP~~pe~~vqG~l~li~~Lq~~L~~ITG~----DavsL-QP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 96 HPFQPEEQVQGYLELIYELQEWLKEITGM----DAVSL-QPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhcCC----ceeec-cCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 44555 457777777777887654442 44444 44555555554333344332 33 6899999999988
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
...+..+|.+|+.|+. ++++.+|+++|++++.+ ++..++++|||. -|+. .+.++||+++.+++|..+..|.|
T Consensus 171 PASAam~G~~VV~V~~--~~~G~VDlddLk~k~~~---~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGA 242 (496)
T COG1003 171 PASAAMAGFKVVVVKC--DENGNVDLDDLRAKAED---NLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGA 242 (496)
T ss_pred hhhHhhcCceEEEEec--CCCCCccHHHHHHHhcc---ceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCc
Confidence 8899999999999999 45678999999999986 788888877763 3554 57799999999999999999998
Q ss_pred CCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCccc----CCCCcceEEEEeCChhHHHHHHHHH-----Hh------
Q 012628 271 YQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL----YAERIGAMNVVCSSSDLAARVKSQL-----KR------ 335 (459)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~----~G~RiG~~~~v~~~~~~~~~~~~~~-----~~------ 335 (459)
--.-..+ . ..+ .+.+-+++=.-++|+|+. .|-..|=+.+ ...+...+-.-. ..
T Consensus 243 NlNA~vG-~--~rP------Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgV---k~~L~pfLP~p~~~~~~~~y~~~~~ 310 (496)
T COG1003 243 NLNAIVG-L--ARP------GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGV---KAHLAPFLPGPVVYHDVGEYRLDYD 310 (496)
T ss_pred chhhhhc-c--ccc------cccccceEEeecccccccCCCCCCCCCCceeh---HhhccccCCCCcccCCCccccccCC
Confidence 3221111 0 000 112223333467888743 2344565543 233111111100 00
Q ss_pred ------hccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCccc-ccCC---cc
Q 012628 336 ------LARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSF-ILRQ---IG 405 (459)
Q Consensus 336 ------~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~---~g 405 (459)
.....+++.+. ...+-..++.-+ .+.+++.-+..--+.+|+...|+ .. +++ +.+. ..
T Consensus 311 ~~~s~g~~~a~~Gs~~i-l~~a~~YI~~mG------~~GL~~ase~AvLNANYia~rL~-~~-----y~~~y~~~~~~~H 377 (496)
T COG1003 311 GKKSIGVSAAPYGSASI-LPIAWAYIRMMG------ADGLKQASEVAVLNANYIARRLK-GY-----YPVPYTGENRVAH 377 (496)
T ss_pred CCccceeeccccCcchH-HHHHHHHHHHHh------HHHHHHHHHHHHHhHHHHHHHhh-hc-----CccccCCCCccee
Confidence 00111112222 112222222211 24456666666678889999998 43 122 1111 11
Q ss_pred eeee--------cCCCH-HHHHHHHhcccEEE--------cCCC-cEEEc-cCChhhHHHHHHHHHHHHhh
Q 012628 406 MFSF--------TGLNK-AQSDNMTNKWHVYM--------TKDG-RISLA-GLSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 406 ~f~~--------~~l~~-~~~~~ll~~~gI~v--------~~gg-Ris~~-~~~~e~i~~~~~~l~~~~~~ 457 (459)
=|++ .|++. +.+.+|++ +|+.- ++|. -|=.+ ..+.+++|++++++.++.++
T Consensus 378 E~ild~r~l~~~~Gv~~~DvAKrLlD-~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 378 ECILDARPLKKETGVRALDVAKRLLD-YGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred EEEeechHhHhhcCCcHHHHHHHHHh-cCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1332 14444 55778888 68853 2222 22222 12668999999999988765
No 378
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.79 E-value=2.4e-07 Score=87.33 Aligned_cols=324 Identities=15% Similarity=0.098 Sum_probs=181.1
Q ss_pred CCCceeecccccCCCCCCccCcHHHHHHHHHHhhc-CC-----CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEe
Q 012628 82 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLER-GE-----NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATV 155 (459)
Q Consensus 82 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~ 155 (459)
+.+++||+..+++.-.+ .+++++.....+.. +. ..-|+...-...+.+.||+++.. ++.|+.
T Consensus 93 G~~~~N~aS~NfL~l~~----~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-------E~aivY- 160 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIE----NEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-------EDAIVY- 160 (467)
T ss_pred Cceeecccchhhhhhcc----cHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-------cceeee-
Confidence 45788888887643222 46666666655533 11 12377777777899999999755 456655
Q ss_pred ecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC-------CC
Q 012628 156 QGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-------PG 228 (459)
Q Consensus 156 ~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~-------~~ 228 (459)
+-|=.++..+ +-+....||.|.+.+-.-....+-++...-.+.+...+ |.+.++..+.+. ++
T Consensus 161 --s~gF~ti~S~--ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k 229 (467)
T KOG1358|consen 161 --SYGFSTIESA--IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPK 229 (467)
T ss_pred --ccccchhhhc--chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccc
Confidence 3333333333 23334589999998877666666677666677776552 556665554431 11
Q ss_pred --C-cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHH--HHhcCCeEEEEEcCC
Q 012628 229 --G-SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRL--FATRGMELLVAQSYS 303 (459)
Q Consensus 229 --~-~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~S~S 303 (459)
. .+.+++-.---+||.+ .++.+|+++..+|...+|.||.|+--..+. ....+.. -++..+.+++++|++
T Consensus 230 ~~~~Rrfiv~EGl~~N~g~i---~pl~~iv~lk~Kyk~RvildEs~SfG~lg~---~GrGvteH~~v~~~~iDiv~~sm~ 303 (467)
T KOG1358|consen 230 KALTRRFIVVEGLYANTGDI---CPLPEIVKLKNKYKFRVILDESLSFGVLGK---TGRGVTEHFGVPITDIDIVTASME 303 (467)
T ss_pred cccceEEEEEEeeccCCCcc---cccHHHHHHHhhheEEEEEecccccccccc---cCccccccCCCCccceeeeeeccc
Confidence 2 2344455557789999 778889999999999999999976443321 1111111 122345678899999
Q ss_pred cCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccc--ccc-CCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Q 012628 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARP--MYS-NPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVR 380 (459)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 380 (459)
-+++-.| |++.+ +.- +....+ +... .++ +.|.....++...+.-. .|. ..+.+.++...
T Consensus 304 ~alas~G---gFc~G---~~~----i~~hQr-LSg~~Y~fSAslPp~la~aa~~ai~i~----~~~---p~~~~~L~~k~ 365 (467)
T KOG1358|consen 304 TALASGG---GFCAG---KSF----IADHQR-LSGSGYCFSASLPPYLAGAAIKAILIE----EWN---PEIVQPLRAKV 365 (467)
T ss_pred ccccccC---ceeec---cee----eEeeee-ccccceeeeccCchhhhhhHHHHHHHH----hhC---cchhhhhhccc
Confidence 9888655 77644 332 222111 1111 111 22222223332222111 111 22344444444
Q ss_pred HHHHHHHhhccCCCCCcccccCCcceeeecCC-----C--------HHHHHHHHhcccEEEcCC-------------C-c
Q 012628 381 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGL-----N--------KAQSDNMTNKWHVYMTKD-------------G-R 433 (459)
Q Consensus 381 ~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l-----~--------~~~~~~ll~~~gI~v~~g-------------g-R 433 (459)
..+.+.|+ ... .+.+....-.....+.+ + .+.+++.+.+ |+.++.. + |
T Consensus 366 ~~~H~~l~-~~s---~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSir 440 (467)
T KOG1358|consen 366 AKFHAALS-SNS---GFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIR 440 (467)
T ss_pred cccchhhh-cCC---ceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEE
Confidence 55555555 321 02222221121111111 1 2345566666 7777553 1 9
Q ss_pred EEEcc-CChhhHHHHHHHHHHHHhh
Q 012628 434 ISLAG-LSLAKCEYLADAIIDSYHN 457 (459)
Q Consensus 434 is~~~-~~~e~i~~~~~~l~~~~~~ 457 (459)
|++.. .++||++++++.|+++...
T Consensus 441 i~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 441 ICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred EEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 98865 4999999999999987654
No 379
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.78 E-value=7e-06 Score=76.92 Aligned_cols=330 Identities=13% Similarity=0.104 Sum_probs=181.7
Q ss_pred CceeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCC--cccHHHHHH---HHHH-HhcCCCCccccCce-EEee
Q 012628 84 KKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPI--EGLAAFNKV---TAEL-LFGADNSVLKEQRV-ATVQ 156 (459)
Q Consensus 84 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~--~g~~~lr~a---ia~~-l~~~~~~~~~~~~i-~~~~ 156 (459)
.-|.|-..++ + .+..|.+++-..+.+....+|+-. .|-.++... +++. ....++.+ |+.- +-+|
T Consensus 41 ~gieLIaSEN-----F--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ld--p~kWGVNVQ 111 (477)
T KOG2467|consen 41 RGIELIASEN-----F--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLD--PEKWGVNVQ 111 (477)
T ss_pred cceeEeeccc-----c--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCC--HHHCceeec
Confidence 4567766554 2 278899999888865444444221 111222222 2211 11223332 4322 2356
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEEcCCCCcch---HHHh--hhCC-----CCeeeeeeecCCCCCCCHHHHHHHHHcC
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNH---KNIF--NDAR-----VPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~---~~~~--~~~G-----~~v~~v~~~~~~~~~~d~e~l~~~i~~~ 226 (459)
..+|+.|+..+ .-+.+.|+|+++-.+--..+| .... +..- ++-.++.++ +.++-+|.|.|++.....
T Consensus 112 p~SGSPANfav--Ytall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~-~~TG~IDYD~Le~~A~~f 188 (477)
T KOG2467|consen 112 PYSGSPANFAV--YTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVD-PSTGYIDYDKLEKTATLF 188 (477)
T ss_pred cCCCCchhhHH--HhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeC-CCCCceehHHHHHHHHhc
Confidence 78899999887 344578999998766322222 1111 1111 122234443 567889999999887764
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCC-CCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC
Q 012628 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQ-GFASGSLDNDASSVRLFATRGMELLVAQSYSKN 305 (459)
Q Consensus 227 ~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 305 (459)
+++++|-..-..+ .. -+..++.++|.+.|.+++.|.++. ++...+.-.++ -...+|+..+-+|.
T Consensus 189 --rPk~iiaG~SaY~--R~---~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsP--------Fey~DiVTTTTHKs 253 (477)
T KOG2467|consen 189 --RPKLIIAGTSAYS--RL---IDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSP--------FEYCDIVTTTTHKS 253 (477)
T ss_pred --CCcEEEeccccch--hh---ccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCc--------ccccceeecccccc
Confidence 6677774222222 22 235566777788899999999963 23322111110 11257888899998
Q ss_pred cccCCCCcceEEEEeCChh--------HHHHHHHHHHhh----ccccccCCchHHHHHH-HHHhCChhhHHHHHHHHHHH
Q 012628 306 LGLYAERIGAMNVVCSSSD--------LAARVKSQLKRL----ARPMYSNPPVHGARIV-ANVVGNPALFDEWKAEMEMM 372 (459)
Q Consensus 306 ~~~~G~RiG~~~~v~~~~~--------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~L~~~~~~~~~~~~~~~~ 372 (459)
+ -|-|-|-+...-+.+. ..-.+.+.+... .++.. +...++..++ ..--..++| ++.
T Consensus 254 L--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGP-HNhtIaalAvALkQa~tpef--------k~Y 322 (477)
T KOG2467|consen 254 L--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGP-HNHTIAALAVALKQAMTPEF--------KEY 322 (477)
T ss_pred c--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCC-CcchHHHHHHHHHhhCCHHH--------HHH
Confidence 6 5777777654332111 111122222211 11111 2233333222 112234444 566
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCcccccCCc--ceeee----cCCCHHHHHHHHhcccEE------------EcCCC-c
Q 012628 373 AGRIKNVRQKLFDSLSAKDKSGKDWSFILRQI--GMFSF----TGLNKAQSDNMTNKWHVY------------MTKDG-R 433 (459)
Q Consensus 373 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~--g~f~~----~~l~~~~~~~ll~~~gI~------------v~~gg-R 433 (459)
.++..++.+.|.+.|. +.| ++.+.... .+.+| .|++...+++.++..+|. +.||| |
T Consensus 323 q~qV~~Nakala~~l~-~~G----y~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiR 397 (477)
T KOG2467|consen 323 QKQVLKNAKALASALI-SRG----YKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIR 397 (477)
T ss_pred HHHHHHHHHHHHHHHH-HcC----ceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCcee
Confidence 6777778888888888 887 45553322 23344 266888888888877774 34556 8
Q ss_pred EEEc-----cCChhhHHHHHHHHHHHHh
Q 012628 434 ISLA-----GLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 434 is~~-----~~~~e~i~~~~~~l~~~~~ 456 (459)
|.-. +.-+++++++.+-|.++++
T Consensus 398 iGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 398 IGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred ccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 8522 3367889888888887764
No 380
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.70 E-value=2.4e-06 Score=82.10 Aligned_cols=282 Identities=14% Similarity=0.051 Sum_probs=139.0
Q ss_pred CceEEeecccchhHHH-HHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeec-CCCCCCCHHHHHHHHHcCC
Q 012628 150 QRVATVQGLSGTGSLR-LAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYD-PKTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~-l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~~~d~e~l~~~i~~~~ 227 (459)
+..++ ++.+|+-.- +....++.-..++.|+.+.-..-.-...+..+|.+++.||... ++....|++.+++.+++..
T Consensus 75 ~~~~~--vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G 152 (389)
T PF05889_consen 75 KSCFV--VPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELG 152 (389)
T ss_dssp CEEEE--ESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHC
T ss_pred cceEE--EecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhC
Confidence 33444 566655333 3311222113568888877544333345677899999999542 3334557888999887654
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH----HhcCCeEEEEEcCC
Q 012628 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF----ATRGMELLVAQSYS 303 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~S~S 303 (459)
+...+.++++++---|.. ++++++|+++|++||+..|+..||.--. . .+... ...+--.+++.|.-
T Consensus 153 ~~~iLcvltttscfapr~--~D~i~~IakiC~~~~IPhlvNnAYgvQ~-------~-~~~~~i~~a~~~GRvda~vqS~d 222 (389)
T PF05889_consen 153 ADNILCVLTTTSCFAPRL--PDDIEEIAKICKEYDIPHLVNNAYGVQS-------S-KCMHLIQQAWRVGRVDAFVQSTD 222 (389)
T ss_dssp GGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT--------H-HHHHHHHHHHHHSTCSEEEEEHH
T ss_pred CCCeEEEEEecCccCCCC--CccHHHHHHHHHHcCCceEEccchhhhH-------H-HHHHHHHHHHhcCCcceeeeecC
Confidence 454555554433223333 1569999999999999999999976321 1 11122 22334567889999
Q ss_pred cCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012628 304 KNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 383 (459)
Q Consensus 304 K~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (459)
|+|-.| +|-.++-+.++..+..+.+.+.. --+..|..-..+-...|.-.. |..-+.++.+.+....+.+
T Consensus 223 kNF~VP---vGgai~As~~~~~i~~vs~~YpG----Ras~sp~ld~~itLl~LG~~g----~~~ll~~r~~~f~~l~erl 291 (389)
T PF05889_consen 223 KNFMVP---VGGAIMASFDPSGILAVSKEYPG----RASASPSLDLFITLLSLGCTG----YGALLKERKASFPYLKERL 291 (389)
T ss_dssp HHHCEE---SSHEEEEESSHHHHHHHHHTSHS----HBTSHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred CCEEec---CCCcEEEecCHHHHHHHHHHhhh----hhhcccchHHHHHHHHHhhhH----HHHHHHHHHHHHHHHHHHH
Confidence 999644 45554445666644444332221 111223322222222222222 3344445555444444444
Q ss_pred HHHHhhccCCCCCcccccCCcceeeec-CC---C---HHHHHHHHhcccEE----EcCCC-------------cEEE---
Q 012628 384 FDSLSAKDKSGKDWSFILRQIGMFSFT-GL---N---KAQSDNMTNKWHVY----MTKDG-------------RISL--- 436 (459)
Q Consensus 384 ~~~L~~~~g~~~~~~~~~~~~g~f~~~-~l---~---~~~~~~ll~~~gI~----v~~gg-------------Ris~--- 436 (459)
.+.-+ +.+. .-.+....+..+.+-+ .+ + .-++-..|...||. +.+++ -+.+
T Consensus 292 ~~~ae-e~~e-~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~Asa 369 (389)
T PF05889_consen 292 KKWAE-EVGE-RLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASA 369 (389)
T ss_dssp HHHHH-HTTE-EBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-
T ss_pred HHHHH-Hhhh-hhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHH
Confidence 44333 3330 0011112222232222 22 1 23444444445773 44443 2222
Q ss_pred ccCChhhHHHHHHHHHHHHh
Q 012628 437 AGLSLAKCEYLADAIIDSYH 456 (459)
Q Consensus 437 ~~~~~e~i~~~~~~l~~~~~ 456 (459)
-+++.||++.++++|+++++
T Consensus 370 iG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 370 IGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp TT--HHHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHhC
Confidence 34599999999999999875
No 381
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.67 E-value=6.2e-06 Score=88.60 Aligned_cols=302 Identities=13% Similarity=0.126 Sum_probs=167.4
Q ss_pred eecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCc-----c----cHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----G----LAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
-++.|.| .. .+|+.|.+.+.+. ..+...|.|.+ | +-++.+.++++.. .+ ..|..+ .
T Consensus 68 fig~G~y----~~-~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtG----m~--~aNaSl--~ 132 (939)
T TIGR00461 68 YIGMGYY----GT-ILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTG----LP--VANASL--L 132 (939)
T ss_pred cCCCCcC----CC-cCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHC----CC--hhhhhc--c
Confidence 3466776 22 2477777555442 12235566633 2 3456666777642 21 334444 5
Q ss_pred ccchhHHHHHHHHHHHhC--CCCEEEEcCCCCcchHHHhh----hCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcE
Q 012628 158 LSGTGSLRLAAALIERYF--PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~--~gd~Vlv~~p~y~~~~~~~~----~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 231 (459)
.++|.+.+.+.... ... ++++|+|++-.++.+..+++ ..|.+++.++. ++|++.+ .+.
T Consensus 133 d~atA~aEa~~~a~-~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~----------~~l~~~~-----~~~ 196 (939)
T TIGR00461 133 DEGTAAAEAMALSF-NVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC----------SDIKKAV-----DVF 196 (939)
T ss_pred chhhHHHHHHHHHH-HhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH----------HHHhhcC-----CEE
Confidence 67777777653222 122 34899999999988876665 67888877643 3444433 245
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCccc---
Q 012628 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGL--- 308 (459)
Q Consensus 232 ~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~--- 308 (459)
.+++.+| |-.|.+ +++++|+++++++|.+++++.--..+..- .. ..+.+-++++++ +|.||.
T Consensus 197 ~v~~q~P-n~~G~i---ed~~~i~~~~h~~gal~~~~ad~~al~ll----~~------Pge~GaDi~vg~-~q~fg~p~g 261 (939)
T TIGR00461 197 GCLLQYP-ATDGSI---LDYKQLIDALHSHKSLVSVAADLMALTLL----TP------PGHYGADIVLGS-SQRFGVPMG 261 (939)
T ss_pred EEEEECC-CCCeEE---ecHHHHHHHHHHcCCEEEEEechHHhCCc----CC------HHHcCCcEEeeC-CCccCCCCC
Confidence 6665555 457999 78999999999999999985432222210 01 122234455443 454443
Q ss_pred -CCCCcceEEEEeCChhHHHHHHHHHHh--------------------hccccccCCchH-HHH-----HHHHH-hCChh
Q 012628 309 -YAERIGAMNVVCSSSDLAARVKSQLKR--------------------LARPMYSNPPVH-GAR-----IVANV-VGNPA 360 (459)
Q Consensus 309 -~G~RiG~~~~v~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~-~~~-----~~~~~-L~~~~ 360 (459)
.|--.|++.+ .+++...+...+.. .++..-...+.. +|. ++..+ +..
T Consensus 262 ~GGP~aG~~a~---~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G-- 336 (939)
T TIGR00461 262 YGGPHAAFFAV---KDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHG-- 336 (939)
T ss_pred CCCCceeeeee---cHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHC--
Confidence 2333677755 43422211110000 000000011111 111 11111 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCccee--eecC---CCHH-HHHHHHhcccEEEcCCC--
Q 012628 361 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTG---LNKA-QSDNMTNKWHVYMTKDG-- 432 (459)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f--~~~~---l~~~-~~~~ll~~~gI~v~~gg-- 432 (459)
.+.++++.++...+..++.+.|. +.| ++...+ .|| +-+. .+.+ ..+++++ +||.+....
T Consensus 337 -----~~GL~~iA~~~~~~a~~l~~~L~-~~G----~~~~~~--~fF~~~~v~~~~~~~~~i~~~~~~-~gi~l~~~~~~ 403 (939)
T TIGR00461 337 -----PKGLKNIARRIHSLTSILANGLE-NDP----HELINK--TWFDTLTVKVGNGISSELLKAAEE-FNINLRAVDTT 403 (939)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHH-hCC----CcccCC--CccceEEEEeCCCCHHHHHHHHHH-CCCeeeecCCC
Confidence 35578888999999999999999 887 454433 344 1122 2334 4556665 599887542
Q ss_pred --cEEEccC-ChhhHHHHHHHHH
Q 012628 433 --RISLAGL-SLAKCEYLADAII 452 (459)
Q Consensus 433 --Ris~~~~-~~e~i~~~~~~l~ 452 (459)
++|+... ++++|+.+++.+.
T Consensus 404 ~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 404 TVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred EEEEEeecCCCHHHHHHHHHHhc
Confidence 7777655 7889999999884
No 382
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.62 E-value=6.2e-08 Score=92.16 Aligned_cols=261 Identities=16% Similarity=0.142 Sum_probs=45.3
Q ss_pred CccCcHHHHHHHHHHhhcCCCCCCCCCccc-----HHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHH
Q 012628 99 QPYVLDVVKKAENLMLERGENKEYLPIEGL-----AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER 173 (459)
Q Consensus 99 ~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~-----~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~ 173 (459)
..++++++.+++.+........+|.-..|- ..+.+.++... + .+.-++ +++...|+.++ +..
T Consensus 15 Rs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt-g-------AeaA~V--vNnnaAAv~L~---l~~ 81 (367)
T PF03841_consen 15 RSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT-G-------AEAALV--VNNNAAAVLLA---LNT 81 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccc-c-------cccccc--ccccccccccc---ccc
Confidence 344578888888776643222344322221 22333333332 2 244445 57777777775 445
Q ss_pred hCCCCEEEEcCCCC------cchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCC--CCC
Q 012628 174 YFPGAKVLISSPTW------GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPT--GID 245 (459)
Q Consensus 174 ~~~gd~Vlv~~p~y------~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPT--G~~ 245 (459)
+.+|.+|++..--- +....+++..|+++++|-.. -.-.+++++++|++ +|.+++-.+++|-. |..
T Consensus 82 la~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI~e---~Ta~ll~Vh~Sn~~i~GFt 154 (367)
T PF03841_consen 82 LAKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAITE---NTAALLKVHTSNFRIQGFT 154 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccc----cccccccccccccc---ccccccccccccccccccc
Confidence 66788888876322 23566788899999999773 23467889999987 77777755666664 333
Q ss_pred CCHHHHHHHHHHHHhcCCeeEEeccCCCCCC----CCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeC
Q 012628 246 PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS----GSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCS 321 (459)
Q Consensus 246 ~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~ 321 (459)
=. -.++++++++++|++++++|.. ++... .+. .+.+.+..++. ..-+++++|-.|.+| |-..|.+++
T Consensus 155 ~~-~~~~el~~la~~~~lp~i~Dlg-sG~l~dl~~~gl-~~Ep~v~~~~~-~GaDlV~fSGdKlLG--GPQaGiI~G--- 225 (367)
T PF03841_consen 155 GE-VSLEELAELAKEHGLPVIVDLG-SGLLVDLSPYGL-PDEPTVQEYLA-AGADLVTFSGDKLLG--GPQAGIIVG--- 225 (367)
T ss_dssp -------HHHHHHHHHT--EEEE-T-THHHHHHHTT-----------CCC-CT-SEEEEETTSSSS--S-S-EEEEE---
T ss_pred cc-ccHHHHHHHHhhcCCcEEEECC-CCCCcCcccccC-ccccHHHHHhh-cCCCEEEEECCCcCC--CCCeEEEEe---
Confidence 21 2588899999999999999998 41110 001 11223333333 345688999999997 444788766
Q ss_pred ChhHHHHHHHHHHhhccccccCCchHHHHHH--HHHhCChhhHHH--HHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012628 322 SSDLAARVKSQLKRLARPMYSNPPVHGARIV--ANVVGNPALFDE--WKAEMEMMAGRIKNVRQKLFDSLSAKD 391 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~L~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~ 391 (459)
.+++++++++. .+.|.+-..-..++...+ ..+++.....++ -.+-+.+..+.++++.+.|.+.|+ ..
T Consensus 226 kk~lI~~lk~~--pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~-~~ 296 (367)
T PF03841_consen 226 KKELIEKLKKH--PLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLK-AA 296 (367)
T ss_dssp EHHHHHHHHHH--HHTTT-B--HHHHHHHHHHHHH---------------------------------------
T ss_pred CHHHHHHHhhC--CCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccc-cc
Confidence 89977776543 233333222223222221 222221110000 012245556677777777877777 54
No 383
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.61 E-value=7.9e-06 Score=74.62 Aligned_cols=169 Identities=18% Similarity=0.237 Sum_probs=114.8
Q ss_pred CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCC-CcchHH----------H
Q 012628 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPT-WGNHKN----------I 193 (459)
Q Consensus 125 ~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~-y~~~~~----------~ 193 (459)
.-|-+.|.+-.|+.+... .-++=.|..+||.|+..+ ++..++|||+.+...-. |....+ .
T Consensus 64 D~GRdtLe~vyA~vf~aE-------~a~VRpq~isGTHAI~~a--Lfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gS 134 (416)
T COG4100 64 DLGRDTLERVYAQVFGAE-------AALVRPQIISGTHAIACA--LFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGS 134 (416)
T ss_pred ccchhHHHHHHHHHhccc-------cceeeeeeecchhHHHHH--HHhccCCCCeEEEecCCcchhHHHHhccCCCCccc
Confidence 345566666666665442 334445678999999998 77789999987765432 322332 2
Q ss_pred hhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCC----CCCHHHHHHHHHHHHh--cCCeeEE
Q 012628 194 FNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI----DPTPEQWEKIADVIQE--KNHIPFF 267 (459)
Q Consensus 194 ~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~----~~s~~~l~~i~~l~~~--~~~~ii~ 267 (459)
++.+|.+..-+|+. .++.+|.+.+.+++++ +++++.+ +--+|. .++.+++++++++.++ .++++++
T Consensus 135 L~dfgi~Y~~v~Lt--~~gkiD~~~v~~~i~~---~tkli~I---QRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFV 206 (416)
T COG4100 135 LKDFGIKYKAVPLT--ADGKIDIQAVKTAISD---RTKLIGI---QRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFV 206 (416)
T ss_pred HHHhCcceeecccc--cCCcccHHHHHHhcCc---cceEEEE---EeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEE
Confidence 44567778888884 4578999999999996 7887775 333443 3566899999999987 4899999
Q ss_pred eccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCC-Cc-ceEEEEeCChh
Q 012628 268 DVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAE-RI-GAMNVVCSSSD 324 (459)
Q Consensus 268 Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-Ri-G~~~~v~~~~~ 324 (459)
|++|.+|.... .+.. -.-++..+|+-|+-| .|+ .. ||+.+ ..+
T Consensus 207 DNCYGEFvE~~---EPt~-------vGaDliAGSLIKNpG-GgiaktGGYiaG---k~~ 251 (416)
T COG4100 207 DNCYGEFVEEK---EPTH-------VGADLIAGSLIKNPG-GGIAKTGGYIAG---KAE 251 (416)
T ss_pred eccchhhhhcc---Cccc-------cchhhhccceeeCCC-Cceeeccceeec---hHH
Confidence 99999998431 1111 124688899999866 342 11 66544 655
No 384
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.55 E-value=1.2e-05 Score=79.29 Aligned_cols=307 Identities=15% Similarity=0.150 Sum_probs=143.3
Q ss_pred eecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCC-----Cccc----HHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLP-----IEGL----AAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~g~----~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
-++.|.| .. .+|+.+.+.+...- .+...|.| .+|. -++...++++. + .++ -+.-+ -
T Consensus 69 fiG~G~y----~~-~~P~~i~~~i~~~~--ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLT-G---mdv--aNaSl--y 133 (429)
T PF02347_consen 69 FIGAGSY----TH-YVPAVIDRNILSRP--EFYTAYTPYQPEISQGRLQALFEYQSMICELT-G---MDV--ANASL--Y 133 (429)
T ss_dssp ---CTTT----------HHHHH-HHCCH--HCCCS-STTSGGGBHHHHHHHHHHHHHHHHHH-T---SSE--E-SEB--S
T ss_pred ccccccc----Cc-eeChhhcCccccCh--hhhccCCCCCcHHHHHHHHHHHHHHHHHHHhh-C---CCc--cCCCC--C
Confidence 4566766 32 23555554222211 22345665 2332 45666666663 2 221 12222 4
Q ss_pred ccchhHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHhh----hCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEE
Q 012628 158 LSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFI 232 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~-~gd~Vlv~~p~y~~~~~~~~----~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ 232 (459)
.|+|..-+.+....+.-. .+++|+++.-.++.+...++ ..|.+++.+|.++ +...| . +.+..
T Consensus 134 d~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~--~~~~d--------~---~~~a~ 200 (429)
T PF02347_consen 134 DGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDE--DGTTD--------D---DDTAA 200 (429)
T ss_dssp SCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBT--TCSB---------S---TTEEE
T ss_pred ChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccc--cCCcc--------c---cCeEE
Confidence 566666665532333222 34699999999998887554 5789999999853 33334 2 47888
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccC---
Q 012628 233 LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLY--- 309 (459)
Q Consensus 233 ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~--- 309 (459)
+++.+|| -.|.+ +++++|+++++++|.++++ .+ -........ .+ .+.+-+|++++ +|.||.|
T Consensus 201 v~vq~Pn-~~G~~---ed~~~i~~~~h~~gal~~~-~a-d~~aL~~l~--~P------ge~GADI~vg~-~Q~fg~p~~~ 265 (429)
T PF02347_consen 201 VMVQNPN-TFGVF---EDIKEIADIAHAAGALVIV-GA-DPNALGGLK--SP------GEYGADIVVGE-HQTFGIPMGF 265 (429)
T ss_dssp EEEESS--TTSB-----THHHHHHHHHHTT-EEEE-CG-GCCGCCTC----G------GGGT-SEEEEC-CTTTT---CC
T ss_pred EEeecCC-CCceE---eeHHHHHHHHHHcCCEEEE-ec-CHHHHhCcC--Ch------hhcCccEEeeC-CCCCcccCCC
Confidence 8887776 45888 7799999999999999887 44 333332211 11 12234455666 7877543
Q ss_pred -CCCcceEEEEeCChhHHHHHHHH------------------------HHhhccccccCCc--hHHHHHHHHHhCChhhH
Q 012628 310 -AERIGAMNVVCSSSDLAARVKSQ------------------------LKRLARPMYSNPP--VHGARIVANVVGNPALF 362 (459)
Q Consensus 310 -G~RiG~~~~v~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~--~~~~~~~~~~L~~~~~~ 362 (459)
|--.|++.+ .+++...+..+ .++-+-....+.+ ..+..++..+.-.+
T Consensus 266 GGP~~G~~a~---~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G--- 339 (429)
T PF02347_consen 266 GGPGAGFFAV---REDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLG--- 339 (429)
T ss_dssp C-S--EEEEE----GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHH---
T ss_pred CCCCeeeEEE---hhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhC---
Confidence 344677755 44422221111 1111111111111 21222222221111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCccee--eecCCCHHHHHHHHhc---ccEEEcCC--Cc--
Q 012628 363 DEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTGLNKAQSDNMTNK---WHVYMTKD--GR-- 433 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f--~~~~l~~~~~~~ll~~---~gI~v~~g--gR-- 433 (459)
.+.++++.++...+..++.+.|. +.. .......-|| +........+.+++++ .|+....- +.
T Consensus 340 ---~~GL~~iA~~~~~~A~yl~~~L~-~~~-----~~~~~~~~f~e~v~~~~~~~~~~~l~~~~~~~gl~~~~~~~~~~l 410 (429)
T PF02347_consen 340 ---PEGLREIAERIHLNAHYLAERLK-KIY-----GLPFDNPFFFEFVVVFSKDKEVEELLKRGIEGGLNLRYPDDGALL 410 (429)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHC-CTT-----BECSSSSSBSSEEEEESS-HHHHHHHHTT----EEEGGG-SSEEE
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHH-Hhc-----CcccCCCCceeeeeecCCcHHHHHHHHHHHhcCCCccccCCCeEE
Confidence 46789999999999999999999 752 1222222333 2222222334344443 35444321 23
Q ss_pred EEEccC-ChhhHHHHHHHH
Q 012628 434 ISLAGL-SLAKCEYLADAI 451 (459)
Q Consensus 434 is~~~~-~~e~i~~~~~~l 451 (459)
||++-. ++|+|+.+++++
T Consensus 411 i~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 411 ICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EE--TT--HHHHHHHHH--
T ss_pred EEccCCCCHHHHHHHHhcC
Confidence 444433 667888877754
No 385
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.33 E-value=0.00043 Score=67.23 Aligned_cols=147 Identities=14% Similarity=0.048 Sum_probs=98.4
Q ss_pred CCCCCCcccHHHHHHHHHHHhcCCCCcc--------ccCceEEeecccchhHHHHHHHHHHH-------hCCC-------
Q 012628 120 KEYLPIEGLAAFNKVTAELLFGADNSVL--------KEQRVATVQGLSGTGSLRLAAALIER-------YFPG------- 177 (459)
Q Consensus 120 ~~Y~~~~g~~~lr~aia~~l~~~~~~~~--------~~~~i~~~~t~ggt~a~~l~~~~~~~-------~~~g------- 177 (459)
+.|....-..+|..-+.+|+....+++. ....|+. ..++++..++ +++. +..+
T Consensus 103 FtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ---~tases~lva--llaaR~~~i~~~k~~~p~~~e~ 177 (511)
T KOG0628|consen 103 FTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQ---GTASESVLVA--LLAARTEKIEEIKSRPPELHES 177 (511)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEe---cCcchhHHHH--HHHHHHHHHHHhhcCCCcccch
Confidence 4555566778898888888876544421 1122322 3345666655 2222 1222
Q ss_pred -----CEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC---CCCcEEEEeCCCCCCCCCCCCHH
Q 012628 178 -----AKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA---PGGSFILLHGCAHNPTGIDPTPE 249 (459)
Q Consensus 178 -----d~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~---~~~~~~ii~~~p~NPTG~~~s~~ 249 (459)
=.+.+.+.++.+.+..+...|++.+.++.+ .+++++.+.|.++|.+. +-.+.+++ .+.. |-.+-+-+
T Consensus 178 ~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td--~n~~mr~~~L~~AIe~D~arGlIPf~v~-at~G--TT~~ca~D 252 (511)
T KOG0628|consen 178 SVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTD--ENFGMRGDTLRKAIEEDIARGLIPFFVC-ATLG--TTSSCAFD 252 (511)
T ss_pred hhhhhheEEecCcccchHHHhHhhcceeEEEeecc--cCcCCCHHHHHHHHHHHHhCCCccEEEE-Eeec--Cccccccc
Confidence 156777788888888888999999999984 48999999999999872 11233333 2221 22223448
Q ss_pred HHHHHHHHHHhcCCeeEEeccCCCCCC
Q 012628 250 QWEKIADVIQEKNHIPFFDVAYQGFAS 276 (459)
Q Consensus 250 ~l~~i~~l~~~~~~~ii~Deay~~~~~ 276 (459)
++.+|..+|+++|+|+++|.+|.+-.+
T Consensus 253 ~l~elg~Vc~~~glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 253 ELEELGPVCREEGLWLHVDAAYAGSAF 279 (511)
T ss_pred cHHHhcchhhhcCEEEEeehhhccccc
Confidence 899999999999999999999997664
No 386
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.26 E-value=0.00081 Score=64.95 Aligned_cols=314 Identities=12% Similarity=0.127 Sum_probs=163.1
Q ss_pred eecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCc-----c----cHHHHHHHHHHHhcCCCCccccCceEEeec
Q 012628 87 NLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----G----LAAFNKVTAELLFGADNSVLKEQRVATVQG 157 (459)
Q Consensus 87 ~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~aia~~l~~~~~~~~~~~~i~~~~t 157 (459)
-++.|.| +. .+|+.|.+-+.+- ..+...|+|.+ | +-++...++++. |.++..... -
T Consensus 79 fiG~GyY----~~-~~P~vI~rnile~--pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT----Gm~VANASm----~ 143 (450)
T COG0403 79 FIGAGYY----DT-YTPPVILRNILEN--PEWYTAYTPYQPEISQGRLEALFEFQTLVADLT----GLDVANASM----L 143 (450)
T ss_pred hccCccc----CC-cCcHHHHHHhhcC--ccccccCCCCchhhhhHHHHHHHHHHHHHHHHh----CCCcccchh----h
Confidence 5677887 33 3477776444331 23456676632 2 234455555553 333322222 4
Q ss_pred ccchhHHHHHHHHHHHhC--CCCEEEEcCCCCcchHHHhhh----CCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcE
Q 012628 158 LSGTGSLRLAAALIERYF--PGAKVLISSPTWGNHKNIFND----ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~~~~--~gd~Vlv~~p~y~~~~~~~~~----~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 231 (459)
-++|.+-+.+.... ... +..+++|+.-+|+.+...++. .|.+++.++.+ |++.++++ ++ ..+.
T Consensus 144 DeaTAaAEAm~ma~-r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~-~~--~~~~ 212 (450)
T COG0403 144 DEATAAAEAMLMAK-RVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA-DD--GDVF 212 (450)
T ss_pred hhHHHHHHHHHHHH-HhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-cc--cCeE
Confidence 56666666653222 233 358999999999999888773 45666666552 67788777 43 2556
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcC---ccc
Q 012628 232 ILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKN---LGL 308 (459)
Q Consensus 232 ~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~---~~~ 308 (459)
.+++-.|+ -.| ....++++|.+.++++|.++++=.==-.++. . .. ..+.+-+|++++-.-. +|.
T Consensus 213 gv~vQyP~-~~G--~~~~d~~~l~~~~h~~~al~~v~aDplaL~L--L--~p------PGe~GADIvvG~~QrfGvPmgf 279 (450)
T COG0403 213 GVLVQYPN-TFG--IVEEDLRALIEAAHSAGALVIVAADPLALGL--L--KP------PGEFGADIVVGSAQRFGVPMGF 279 (450)
T ss_pred EEEEecCC-CCC--ccchhHHHHHHHHhhcCCEEEEEechhHhhc--c--CC------ccccCCceEEecCcccCCCcCC
Confidence 66654444 345 2337799999999999987775211011110 0 00 1223456667665442 333
Q ss_pred CCCCcceEEEEeCChhHHHHH------------------------HHHHHhhccccccCCchH--HHHHHHH-HhCChhh
Q 012628 309 YAERIGAMNVVCSSSDLAARV------------------------KSQLKRLARPMYSNPPVH--GARIVAN-VVGNPAL 361 (459)
Q Consensus 309 ~G~RiG~~~~v~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~--~~~~~~~-~L~~~~~ 361 (459)
.|-.+||..+ ..+....+ ...+++-+-....+.+.. +..++.. .+..
T Consensus 280 GGPhag~fA~---~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hG--- 353 (450)
T COG0403 280 GGPHAGYFAV---KDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHG--- 353 (450)
T ss_pred CCcceeeeeE---hHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhC---
Confidence 4555777755 33311100 001111111111111111 1111111 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCccee--eecCCCHHHHHHHHhc---ccEEEcCC--CcE
Q 012628 362 FDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTGLNKAQSDNMTNK---WHVYMTKD--GRI 434 (459)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f--~~~~l~~~~~~~ll~~---~gI~v~~g--gRi 434 (459)
.+.++++..+..++..++.+.|+ +.+. +++.... .|| +.+.+..+..+.++++ .|+-++.- .++
T Consensus 354 ----p~GLk~iA~r~~~~a~~la~~L~-~~~~--g~~~~~~--~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~~~~ 424 (450)
T COG0403 354 ----PQGLKEIAERIHRLAAYLAAGLK-EIGA--GVELVFD--HFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDADTV 424 (450)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHh-hcCC--ceEeccc--cceeeEEEecchhHHHHHHHHHHhcCCceeeecCCce
Confidence 35688999999999999999999 7641 1333322 455 2234432333333332 35555432 254
Q ss_pred EEc--cC-ChhhHHHHHHHHHHH
Q 012628 435 SLA--GL-SLAKCEYLADAIIDS 454 (459)
Q Consensus 435 s~~--~~-~~e~i~~~~~~l~~~ 454 (459)
.++ .. ++++|+.+++++...
T Consensus 425 ~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 425 LIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred EEEeecccCHHHHHHHHHHHhhh
Confidence 443 22 567888888877654
No 387
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.26 E-value=9.6e-05 Score=70.87 Aligned_cols=284 Identities=15% Similarity=0.111 Sum_probs=155.3
Q ss_pred CCccccCceEEeecccchhHHHHHHHHHHHhC--CC----------CEEE-EcCCCCcchHHHhhhCC---CCeeeeeee
Q 012628 144 NSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PG----------AKVL-ISSPTWGNHKNIFNDAR---VPWSEYRYY 207 (459)
Q Consensus 144 ~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~--~g----------d~Vl-v~~p~y~~~~~~~~~~G---~~v~~v~~~ 207 (459)
|.+...+.|. ++||+-++.-+. .++... |+ +-|+ .++-++.+....+..+| -.++.|+.
T Consensus 155 Gw~~~~DgIf---~pggsisn~Ya~-~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t- 229 (510)
T KOG0629|consen 155 GWEEGGDGIF---APGGSISNMYAM-NCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKT- 229 (510)
T ss_pred CCCCCCCcee---cCCchhHHHHHH-HHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecc-
Confidence 4433335554 577765554442 233332 33 2333 33456666777777777 46777887
Q ss_pred cCCCCCCCHHHHHHHHHcCCCC---cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChh
Q 012628 208 DPKTVGLDFEGMIADIKAAPGG---SFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDAS 284 (459)
Q Consensus 208 ~~~~~~~d~e~l~~~i~~~~~~---~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~ 284 (459)
++.+.+++++|++.|.+...+ +.++-.+....--|.. +++..|+++|++|++|+++|.||.+-..-+.
T Consensus 230 -~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWmHvDAAwGGglLmS~----- 300 (510)
T KOG0629|consen 230 -DERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWMHVDAAWGGGLLMSR----- 300 (510)
T ss_pred -cccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEEEeecccccccccCh-----
Confidence 456789999999998764323 4444444456666888 9999999999999999999999887332111
Q ss_pred HHHHHHh-cCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhc------cccccCCchHHHHHHHHHhC
Q 012628 285 SVRLFAT-RGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLA------RPMYSNPPVHGARIVANVVG 357 (459)
Q Consensus 285 ~~~~~~~-~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~L~ 357 (459)
.-+..+. ...-.-+..+.+|.+| ..+..+.... +... +..+..... +.-...++. ......++
T Consensus 301 k~R~kl~Giera~SvtwnpHK~~g-aplqCsa~l~--r~~g----ll~~Cn~~~A~YLFq~dK~YdvS~---DTgdK~iQ 370 (510)
T KOG0629|consen 301 KHRHKLTGIERANSVTWNPHKLMG-APLQCSAFLT--REEG----LLQRCNQMSAIYLFQQDKFYDVSY---DTGDKAIQ 370 (510)
T ss_pred hhHhhccCccccCceeecHHHhhc-CcchhhHHHH--HHHH----HHHhhcccchhhhhccCceeeccc---ccccchhh
Confidence 1111111 1122355678899998 5566666522 2221 222111110 000000000 01111111
Q ss_pred Ch---hhHHHH---H----HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc-ccc--CCccee-eec------CC-----
Q 012628 358 NP---ALFDEW---K----AEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-FIL--RQIGMF-SFT------GL----- 412 (459)
Q Consensus 358 ~~---~~~~~~---~----~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~~--~~~g~f-~~~------~l----- 412 (459)
.+ +....| + +..++..+++-++.+++++.|+ +-+. +. +.. |+--.+ .|. ++
T Consensus 371 CGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lr-er~~---~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e 446 (510)
T KOG0629|consen 371 CGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLR-EREG---FEMLFELEPEHVNVCFWYVPPSLRGWQENPE 446 (510)
T ss_pred cCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH-hccc---ceehhcCCCceEEEeeccCchHhccCcccch
Confidence 11 122222 2 4467888899999999999999 6542 22 222 332222 221 11
Q ss_pred --------CHHHHHHHHhcccEEE---cCCC------cEEEccC--ChhhHHHHHHHHHHHHh
Q 012628 413 --------NKAQSDNMTNKWHVYM---TKDG------RISLAGL--SLAKCEYLADAIIDSYH 456 (459)
Q Consensus 413 --------~~~~~~~ll~~~gI~v---~~gg------Ris~~~~--~~e~i~~~~~~l~~~~~ 456 (459)
.+..-++++++ |-.. .|.+ |+-+.+. ++++++.+++-|..+=+
T Consensus 447 ~~~rL~kVaPkIK~~Mm~~-Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 447 RDSRLVKVAPKIKERMMKK-GTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred hhhHHHhhCcHHHHHHHhc-cceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 22333455554 5433 2333 7766543 78899999998876544
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.19 E-value=0.00045 Score=65.49 Aligned_cols=166 Identities=21% Similarity=0.261 Sum_probs=100.4
Q ss_pred CeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHH-H--------
Q 012628 263 HIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQ-L-------- 333 (459)
Q Consensus 263 ~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~-~-------- 333 (459)
.++++|.. +.....+. |. ..-.++-.|.-|++|+.| ++-+++ .+++++++... +
T Consensus 171 ~~~v~D~S-S~ilsr~i--Dv---------sk~dviyagaQKnlGpaG--ltvvIv---r~~~l~r~~~~~~P~if~y~~ 233 (365)
T COG1932 171 GLLVADAS-SAILSRPI--DV---------SKYDVIYAGAQKNLGPAG--LTVVIV---RPDLLERAESYTLPSIFDYLT 233 (365)
T ss_pred ceEEEecc-cHHhcCCC--Ch---------hHcceEEEehhhccCccc--eEEEEE---cHHHHhcccccCCchHhhchh
Confidence 78999988 44432211 11 123566679999999988 787776 77766665432 1
Q ss_pred HhhccccccCCchHHHHHHHHH----hCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc-cccC--Cc--
Q 012628 334 KRLARPMYSNPPVHGARIVANV----VGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWS-FILR--QI-- 404 (459)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~----L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~~~~--~~-- 404 (459)
......++..||.++-...... .+.++ ++.+.++-+++.+.|++.+. +-++ +. .+.+ ..
T Consensus 234 ~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GG--------l~~~~~rn~~ka~~LY~~id-~s~f---y~~~v~~~~RS~m 301 (365)
T COG1932 234 HADNGSMYNTPPTFAWYLLGLVFKWLKSQGG--------LEALEARNQAKAQLLYDWID-KSDF---YRNLVAKANRSRM 301 (365)
T ss_pred hhccCCccCCcHHHHHHHHHHHHHHHHHcCC--------HHHHHHHHHHHHHHHHHHHH-hCCc---cccccchhhccce
Confidence 1112345555666655544322 22332 57888889999999999998 6552 11 1111 11
Q ss_pred -ceeeec--CCCHHHHHHHHhcccEEEcCC-----C-cEEEcc-CChhhHHHHHHHHHHHHhhc
Q 012628 405 -GMFSFT--GLNKAQSDNMTNKWHVYMTKD-----G-RISLAG-LSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 405 -g~f~~~--~l~~~~~~~ll~~~gI~v~~g-----g-Ris~~~-~~~e~i~~~~~~l~~~~~~~ 458 (459)
..|-+. .++..++..+.++ |+....| | |+|+.. ++.|+++.+++-++.+.++.
T Consensus 302 nV~f~~~~~~ld~~fv~eae~~-gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 302 NVTFTLVDAELDKGFVAEAEAA-GLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred eEEEEcCcHHHHHHHHHHHHHc-CCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 112222 2345566666664 6665443 5 999764 48899999999998877653
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.03 E-value=0.00024 Score=66.57 Aligned_cols=212 Identities=10% Similarity=0.097 Sum_probs=117.7
Q ss_pred CHHHHHHHHHcCC---CCcEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHH-
Q 012628 215 DFEGMIADIKAAP---GGSFILLHGCAHNPTG-IDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLF- 289 (459)
Q Consensus 215 d~e~l~~~i~~~~---~~~~~ii~~~p~NPTG-~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~- 289 (459)
.++++++.|.... .....+|+..-+..-| ..-|++-++.|-+++++||+.+|+||+..+.+.. .+.|.-..+
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaT---Gk~WaHehw~ 330 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGAT---GKFWAHEHWN 330 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCcc---CceeeehhcC
Confidence 3566666665521 2334455444466666 4578899999999999999999999996665543 234432222
Q ss_pred HhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCchHHH--HHHHHHhCChhhHHHHHH
Q 012628 290 ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPVHGA--RIVANVVGNPALFDEWKA 367 (459)
Q Consensus 290 ~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~~~~~~~~~~~ 367 (459)
++..++++ +|||-|-.. ||.. +++++ -.+.++.. .+|.+-|.-.. ..+...+++.
T Consensus 331 l~~PpD~v---TFSKK~q~g----Gffh----~~~fr--pn~pYrif--NTWmGdP~k~lll~~vv~~I~~~-------- 387 (484)
T KOG1405|consen 331 LDSPPDVV---TFSKKFQTG----GFFH----DEEFR--PNEPYRIF--NTWMGDPSKNLLLEEVVQEIKRE-------- 387 (484)
T ss_pred CCCCccce---ehhhhhhcC----cccc----CcccC--CCchHHHh--hhhcCChHHHHHHHHHHHHHhHH--------
Confidence 22233444 899998743 5542 33311 00112222 34544443221 1122223322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc--CCCCCcccccCCcceeeecCC-C---HHHHHHHHhcccEEEcCCC----cE--E
Q 012628 368 EMEMMAGRIKNVRQKLFDSLSAKD--KSGKDWSFILRQIGMFSFTGL-N---KAQSDNMTNKWHVYMTKDG----RI--S 435 (459)
Q Consensus 368 ~~~~~~~~~~~~~~~l~~~L~~~~--g~~~~~~~~~~~~g~f~~~~l-~---~~~~~~ll~~~gI~v~~gg----Ri--s 435 (459)
...+..+..-++|...|. ++ ..|+.+.-....|.|..| +. + .+.+-..++.+||.+..+| |+ +
T Consensus 388 ---~Ll~n~~~vG~~l~~gL~-~Lq~~~p~~~~~~RGrGTF~a~-d~ps~~~Rdk~i~~~~~nGv~~GGCg~~siRfRPs 462 (484)
T KOG1405|consen 388 ---DLLNNVAHVGKALLKGLL-ELQAKYPGKINNLRGRGTFIAW-DCPSGSIRDKLILIARLNGVNLGGCGDKSIRFRPS 462 (484)
T ss_pred ---HHHHHHHHHHHHHHHHHH-HHHHhCchhhhcccccceEEEE-eCCChHHHHHHHHHHHHcCceecccccceeeeccc
Confidence 223344444556666655 43 234444445555554455 33 2 2334455555799998887 55 4
Q ss_pred EccCChhhHHHHHHHHHHHHhhc
Q 012628 436 LAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 436 ~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
+.. .+...+.+++++.+++..+
T Consensus 463 Lvf-~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405|consen 463 LVF-RKHHADIFLDIFDKILAGL 484 (484)
T ss_pred eee-hhhhHHHHHHHHHHHhccC
Confidence 433 7788899999999988753
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.74 E-value=0.0075 Score=65.17 Aligned_cols=303 Identities=13% Similarity=0.077 Sum_probs=152.8
Q ss_pred eeecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCc---------ccHHHHHHHHHHHhcCCCCccccCceEEee
Q 012628 86 LNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE---------GLAAFNKVTAELLFGADNSVLKEQRVATVQ 156 (459)
Q Consensus 86 i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~---------g~~~lr~aia~~l~~~~~~~~~~~~i~~~~ 156 (459)
.-++.|.| ++ .+|+.|.+.+.+. ..+...|+|.+ .+-++...|+++. |.++....+
T Consensus 82 ~fiG~G~y----~~-~~P~vi~~~i~~~--~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt----Gm~vaNASl---- 146 (954)
T PRK12566 82 SLIGMGYH----GT-VTPTVILRNVLEN--PGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT----GLDLANASL---- 146 (954)
T ss_pred cccccccc----CC-cCcHHHHHHHHhC--chhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh----Cchhhhhhh----
Confidence 45677777 32 3466665544432 23345666643 2345556666663 222211112
Q ss_pred cccchhHHHHHHHHHHHhCC--CCEEEEcCCCCcchHHHhh----hCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCc
Q 012628 157 GLSGTGSLRLAAALIERYFP--GAKVLISSPTWGNHKNIFN----DARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS 230 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~--gd~Vlv~~p~y~~~~~~~~----~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~ 230 (459)
--++|.+-+.+.... .... ..+|+|++-.++.+..+++ ..|.+++. +++++.+.+ .+
T Consensus 147 ~D~atA~aEA~~ma~-~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~---~~ 209 (954)
T PRK12566 147 LDEATAAAEAMALAK-RVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAH---AV 209 (954)
T ss_pred ccchhHHHHHHHHHH-HHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCC---CE
Confidence 235555544332112 2222 4689999999998887766 34555543 223333332 46
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEc---CCcCcc
Q 012628 231 FILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQS---YSKNLG 307 (459)
Q Consensus 231 ~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S---~SK~~~ 307 (459)
..+++.+|| -.|.+ +++++|+++++++|.+++ +.+ -.+...-+. . ..+.+-+|++++ |.=-+|
T Consensus 210 ~~v~vq~P~-~~G~i---~d~~~i~~~~h~~gal~~-~~~-d~laL~ll~--~------Pge~GADI~vG~~Q~fGvp~~ 275 (954)
T PRK12566 210 FGALLQYPD-THGEI---RDLRPLIDQLHGQQALAC-VAA-DLLSLLVLT--P------PGELGADVVLGSTQRFGVPMG 275 (954)
T ss_pred EEEEEECCC-CceEE---ccHHHHHHHHHHcCCEEE-EEe-CHHHHhCCC--C------hhhcCCcEEeeCCCcCCCCCC
Confidence 666665664 45888 789999999999998866 333 111111010 0 123344555553 222233
Q ss_pred cCCCCcceEEEEeCChhHHHHHHH------------------------HHHhhccccccCCch--HHHHHHHH-HhCChh
Q 012628 308 LYAERIGAMNVVCSSSDLAARVKS------------------------QLKRLARPMYSNPPV--HGARIVAN-VVGNPA 360 (459)
Q Consensus 308 ~~G~RiG~~~~v~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~--~~~~~~~~-~L~~~~ 360 (459)
..|--.||+.+ .+++...+-. .+++-+-....+.+. ++..++.. .+..
T Consensus 276 ~GGP~ag~~a~---~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~G-- 350 (954)
T PRK12566 276 YGGPHAAYFAC---RDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHG-- 350 (954)
T ss_pred CCCCCeeeeee---hHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhC--
Confidence 33444777754 3332111110 011111111111111 11111111 1222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcccccCCccee--eecCC--CH-HHHHHHHhcccEEEcC--CCc
Q 012628 361 LFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGKDWSFILRQIGMF--SFTGL--NK-AQSDNMTNKWHVYMTK--DGR 433 (459)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~g~f--~~~~l--~~-~~~~~ll~~~gI~v~~--ggR 433 (459)
.+.++++.++...+..+|.+.|. +.| ++... ..|| +-+.+ +. +..++.++ .||-++- .++
T Consensus 351 -----p~Gl~~ia~~~~~~a~~l~~~l~-~~g----~~~~~--~~fF~~~~v~~~~~~~~~~~~a~~-~~~n~r~~~~~~ 417 (954)
T PRK12566 351 -----PEGLKRIAQRVHRLTAILAAGLE-AKG----IKRLN--RHFFDTLTLEVGGAQAAIIESAEA-ARINLRILGRGR 417 (954)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHH-hcC----Ccccc--CCccceEEEEccCCHHHHHHHHHH-CCCeeEEeCCCe
Confidence 25578888989999999999999 877 34332 2454 11222 23 33445544 4776543 344
Q ss_pred E--EEccC-ChhhHHHHHHHHH
Q 012628 434 I--SLAGL-SLAKCEYLADAII 452 (459)
Q Consensus 434 i--s~~~~-~~e~i~~~~~~l~ 452 (459)
+ |+... +.++++.+++.+.
T Consensus 418 ~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 418 LGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred EEEEeCCCCCHHHHHHHHHHhc
Confidence 4 44332 6688888888773
No 391
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.25 E-value=0.008 Score=54.36 Aligned_cols=171 Identities=16% Similarity=0.138 Sum_probs=96.1
Q ss_pred HhhhCCCCeeeee-eecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCC--CCCHHHHHHHHHHHHhcCCeeEEec
Q 012628 193 IFNDARVPWSEYR-YYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGI--DPTPEQWEKIADVIQEKNHIPFFDV 269 (459)
Q Consensus 193 ~~~~~G~~v~~v~-~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~--~~s~~~l~~i~~l~~~~~~~ii~De 269 (459)
.+-.+|++++.+. +.+.+...-|++.+++.+.+..+...+.+++ -|.. .-+++.+++|+.+|..|++.-|+..
T Consensus 119 si~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~s----ttscfapr~pd~leaiaaica~~diphivnn 194 (432)
T KOG3843|consen 119 SIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHS----TTSCFAPRSPDNLEAIAAICAAHDIPHIVNN 194 (432)
T ss_pred HHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEee----cccccCCCCCchHHHHHHHHHccCchhhhcc
Confidence 3346799887765 3333344568999999998865554444432 2221 2345889999999999999999999
Q ss_pred cCCCCCCCCCCCChhHHHHH---HhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhhccccccCCch
Q 012628 270 AYQGFASGSLDNDASSVRLF---ATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRLARPMYSNPPV 346 (459)
Q Consensus 270 ay~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (459)
+|.--. . ..++.. ..-+..+-++.|+-|+|-.| +|..++-.-... ++....+...+-.+..|.
T Consensus 195 ayglqs-e------e~i~~iaa~~~~grida~vqsldknf~vp---vggaiia~fk~n----~iq~iak~ypgrasa~ps 260 (432)
T KOG3843|consen 195 AYGLQS-E------ECIHKIAAAAECGRIDAFVQSLDKNFMVP---VGGAIIAAFKDN----FIQEIAKMYPGRASASPS 260 (432)
T ss_pred ccccch-H------HHHHHHHHHhhhccHHHHHHHhhhcceee---cchhHhhHhHHH----HHHHHHHhCCCccccCcc
Confidence 975322 1 122222 22233456778999999766 565533122223 333333322222334555
Q ss_pred HHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 012628 347 HGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFD 385 (459)
Q Consensus 347 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 385 (459)
....+....+...+|. +-+.+.++.+-..++.+..
T Consensus 261 ~dllitll~~gqn~f~----e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 261 LDLLITLLSLGQNAFK----ELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred HHHHHHHHHhchhHHH----HHHHHHHHHHHHHHHHHHH
Confidence 5444444445544553 3334444444444444443
No 392
>PLN02672 methionine S-methyltransferase
Probab=96.65 E-value=0.059 Score=59.72 Aligned_cols=198 Identities=14% Similarity=0.056 Sum_probs=120.5
Q ss_pred HHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHH----hCCCCEEEE
Q 012628 107 KKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIER----YFPGAKVLI 182 (459)
Q Consensus 107 ~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~----~~~gd~Vlv 182 (459)
+..+...+.++...-|.|..|...||+.||.|+...+++++++++|++ ..+-..+++.+.++... ++.+.+...
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (1082)
T PLN02672 407 LAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVV--FPSRAVAIENALRLFSPRLAIVDEHLTRWL 484 (1082)
T ss_pred HHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEE--eccHHHHHHHHHHhhChHHHhhhhhhhccC
Confidence 444555666655678999999999999999999999999999999999 88889999887443221 122222222
Q ss_pred cCCCCcchHHHhhhCC--------CCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 012628 183 SSPTWGNHKNIFNDAR--------VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (459)
Q Consensus 183 ~~p~y~~~~~~~~~~G--------~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i 254 (459)
+. .|...+...| .++.-+.- +. + -+.+.+.++.. ++.+++..-.+ +-..+...++.|
T Consensus 485 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~--~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~ 549 (1082)
T PLN02672 485 PK----KWLTSLAIENATSDSKSDDVITVIEA--PR--Q--SDLVIELIKKL--KPQVVVTGMAD---FEMRTSTAFEHL 549 (1082)
T ss_pred CH----HHHhHhhhhcccccCccCCeEEEEeC--CC--c--chHHHHHHHhC--CCeEEEEeccc---hhhhhHHHHHHH
Confidence 11 2333332222 11211111 11 1 13556666653 33455532222 445556889999
Q ss_pred HHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhc--CCeEEEEEcCCcCcccCCCCcceEEEEeCChh
Q 012628 255 ADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATR--GMELLVAQSYSKNLGLYAERIGAMNVVCSSSD 324 (459)
Q Consensus 255 ~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~ 324 (459)
.+.+++.|..++.|.. ..|-..+......-+..+... ..+..++.++-|+--.+.+-+.++ +.-+..
T Consensus 550 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 618 (1082)
T PLN02672 550 LNVTAEIGARLFLDIS-DHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFV--ISENEA 618 (1082)
T ss_pred HHHHHhhCcEEEEehh-hheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEE--ecCcHH
Confidence 9999999999999987 333222222222222222221 236667778888877788989998 445555
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.30 E-value=0.045 Score=55.73 Aligned_cols=142 Identities=17% Similarity=0.180 Sum_probs=94.6
Q ss_pred CCCCCC---cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC--CC----CEEEEcCCCCcch
Q 012628 120 KEYLPI---EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF--PG----AKVLISSPTWGNH 190 (459)
Q Consensus 120 ~~Y~~~---~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~--~g----d~Vlv~~p~y~~~ 190 (459)
+-|.|. +|+.++-+.+-+++-.--| -+++.+ |-++|.++-+.-...++.+. .| ...++|...++..
T Consensus 569 HPF~P~eQaqGY~~lf~~Le~~Lc~iTG----~D~~s~-QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 569 HPFAPVEQAQGYQQLFTELEKDLCEITG----FDSFSL-QPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTN 643 (1001)
T ss_pred CCCCchHHHhhHHHHHHHHHHHhheeec----ccceee-cCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCC
Confidence 455553 4666666555555543322 255554 34444444444322333322 33 3567777788878
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
...+.++|.+|++|.. +.++.+|..+|.+...++.+.-..++++.|+.- |+. .+.+++++++.++||--+..|.+
T Consensus 644 PASA~MagmkvvpV~~--~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~-Gvf--E~~i~d~cd~iHehGGQVYlDGA 718 (1001)
T KOG2040|consen 644 PASAAMAGMKVVPVGC--DANGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVF--EEGIDDICDIIHEHGGQVYLDGA 718 (1001)
T ss_pred hhhHHhcCCEEEEeec--cCCCCccHHHHHHHHHHhhhhhheeEEeccccc-ccc--cccHHHHHHHHHhcCCEEEecCC
Confidence 8888999999999998 557789999999988776555556666666522 443 36699999999999999999998
Q ss_pred C
Q 012628 271 Y 271 (459)
Q Consensus 271 y 271 (459)
-
T Consensus 719 N 719 (1001)
T KOG2040|consen 719 N 719 (1001)
T ss_pred C
Confidence 3
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=95.55 E-value=1.2 Score=41.36 Aligned_cols=184 Identities=18% Similarity=0.225 Sum_probs=97.4
Q ss_pred CCCCC--CCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcce
Q 012628 238 AHNPT--GIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGA 315 (459)
Q Consensus 238 p~NPT--G~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 315 (459)
+.|.| |+-++.-+ +-.-+|.+++.|-. +.|...+.+. ....++..+--|.+|+.|+ -.
T Consensus 155 CaNETVHGVEf~~~P------~~~~~~~vlVaDmS-SnflSrpvDv-----------sk~gvi~aGAQKN~G~aG~--Tv 214 (370)
T KOG2790|consen 155 CANETVHGVEFDFIP------VNDPKGAVLVADMS-SNFLSRPVDV-----------SKFGVIFAGAQKNVGPAGV--TV 214 (370)
T ss_pred ecCceeeceecCCCC------CCCCCCceEEEecc-cchhcCCccc-----------hhcceEEeccccccCcccc--EE
Confidence 45666 65543322 12346888999988 6666433221 1235667788999999885 33
Q ss_pred EEEEeCChhHHHHHHHH------HHhh--ccccccCCchHHHHHH----HHHhCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 012628 316 MNVVCSSSDLAARVKSQ------LKRL--ARPMYSNPPVHGARIV----ANVVGNPALFDEWKAEMEMMAGRIKNVRQKL 383 (459)
Q Consensus 316 ~~~v~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~----~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (459)
+++ .++++...... ++.. ..+.+..+|..+..+. ..+++.++ +..+.+.-.++.+.+
T Consensus 215 viv---r~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GG--------l~a~e~~n~~Kskll 283 (370)
T KOG2790|consen 215 VIV---RKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGG--------LAAMEKLNQEKSKLL 283 (370)
T ss_pred EEE---ehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhccc--------HHHHHHHHHHHHHHH
Confidence 322 33322111110 0000 1122334555543333 44555554 356667777888999
Q ss_pred HHHHhhcc-CCCCCccccc-CC--cceeee--c---CCCHHHHHHHHhcccEEEcCC-----C-cEEEcc-CChhhHHHH
Q 012628 384 FDSLSAKD-KSGKDWSFIL-RQ--IGMFSF--T---GLNKAQSDNMTNKWHVYMTKD-----G-RISLAG-LSLAKCEYL 447 (459)
Q Consensus 384 ~~~L~~~~-g~~~~~~~~~-~~--~g~f~~--~---~l~~~~~~~ll~~~gI~v~~g-----g-Ris~~~-~~~e~i~~~ 447 (459)
++.+. +. |+ +.+.. |. .-|-+. + .+..+|+....++ +..-..| | |-|+-. ++-++.+.+
T Consensus 284 Yd~iD-~s~gf---y~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKGhRSVGGiRASlYNAisv~~~q~L 358 (370)
T KOG2790|consen 284 YDAID-NSNGF---YRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKE-HMVQLKGHRSVGGIRASLYNAISVEEVQKL 358 (370)
T ss_pred HHHHH-hcCCe---EEcccchhhhhhcccceeecchHHHHHHHHHHHHh-hhhccccccccccchhhhhccccHHHHHHH
Confidence 99998 54 42 22211 11 011111 1 1244666666665 4433333 4 888654 378888888
Q ss_pred HHHHHHHHhh
Q 012628 448 ADAIIDSYHN 457 (459)
Q Consensus 448 ~~~l~~~~~~ 457 (459)
++-+++..+.
T Consensus 359 ~~~m~~F~k~ 368 (370)
T KOG2790|consen 359 AAFMKEFQKK 368 (370)
T ss_pred HHHHHHHHHh
Confidence 8888777654
No 395
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=94.33 E-value=4.7 Score=37.91 Aligned_cols=301 Identities=16% Similarity=0.077 Sum_probs=158.9
Q ss_pred cccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCC---CEEEEcCCCCcch----HHHhhhCC
Q 012628 126 EGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG---AKVLISSPTWGNH----KNIFNDAR 198 (459)
Q Consensus 126 ~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~g---d~Vlv~~p~y~~~----~~~~~~~G 198 (459)
.+.+.....++....+. .++|.+ .++-|--++.. ++..+.|. -+|+...-.|+.- .+.++..|
T Consensus 111 ~~De~il~l~~~iVGA~------e~Evav--mNsLTvNlh~L--l~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG 180 (465)
T KOG3846|consen 111 SIDEPILPLLAPIVGAQ------ENEVAV--MNSLTVNLHSL--LISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHG 180 (465)
T ss_pred ecchhhhhhhhhhccCC------chhhhh--HhhhhhHHHHH--HHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcC
Confidence 34556666677765544 577877 66666666665 44445554 3788888777643 44455667
Q ss_pred CCeee--eeeec-CCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012628 199 VPWSE--YRYYD-PKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (459)
Q Consensus 199 ~~v~~--v~~~~-~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~ 275 (459)
..+.. +-..+ +....+-.+++.+.|...++...+++.+..+.=||..+ ++.+|...-+.+|+++=.|-+ ..++
T Consensus 181 ~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~F---di~aIT~Agq~kgc~VGfDLA-HAvg 256 (465)
T KOG3846|consen 181 ISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYF---DIGAITFAGQFKGCLVGFDLA-HAVG 256 (465)
T ss_pred CChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeeccccc---chhhhhhcccCCCcEechhhh-hhhc
Confidence 65332 11111 33456778999999988777777888899999999995 455666555667999989988 4443
Q ss_pred CCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceEEEEeCChhHHHHHHHHHHhh-------------------
Q 012628 276 SGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMNVVCSSSDLAARVKSQLKRL------------------- 336 (459)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~v~~~~~~~~~~~~~~~~~------------------- 336 (459)
-- ...+...+.++.|+---|-+....=.||.+.+ .+........++..+
T Consensus 257 NV---------pL~LHdWgVDFACWCSYKYlnaGaGgIgGlFv---Hekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lip 324 (465)
T KOG3846|consen 257 NV---------PLQLHDWGVDFACWCSYKYLNAGAGGIGGLFV---HEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIP 324 (465)
T ss_pred CC---------ceEEeecCCceEEEeeecccccCCCccceeee---ehhhhcchhhHHhhhccCCcchhhhhccccccCc
Confidence 21 11223444556565555654321122666654 333322222222211
Q ss_pred --ccccccCCchHHHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-------CcccccCC----
Q 012628 337 --ARPMYSNPPVHGARIVANVVGNPALFDEWKAEMEMMAGRIKNVRQKLFDSLSAKDKSGK-------DWSFILRQ---- 403 (459)
Q Consensus 337 --~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-------~~~~~~~~---- 403 (459)
...-.++||.+...+....| ++..+ -.+++.|++---...+|...++...|... .+..+.|.
T Consensus 325 Ga~GfRiSNPpi~~v~al~~SL---e~F~q--~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~e 399 (465)
T KOG3846|consen 325 GALGFRISNPPIIDVVALRSSL---ELFAQ--FNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDE 399 (465)
T ss_pred cccccccCCCcHhHHHHHHhhH---HHHHH--hhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCccccc
Confidence 01112345554333322211 22211 11334443333333333333331112110 01111111
Q ss_pred cceee--ecCC-CHHHHHHHHhcccEEEcCC---C-cEEEccC--ChhhHHHHHHHHHHHHhhc
Q 012628 404 IGMFS--FTGL-NKAQSDNMTNKWHVYMTKD---G-RISLAGL--SLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 404 ~g~f~--~~~l-~~~~~~~ll~~~gI~v~~g---g-Ris~~~~--~~e~i~~~~~~l~~~~~~~ 458 (459)
.|--+ .... ++..+++|-+ +||..... + |+.-..+ +-.++..++.+|.++++.+
T Consensus 400 rGcQLsl~Fssp~~~vfqeL~k-rGv~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 400 RGCQLSLYFSSPTPKVFQELHK-RGVIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred ccceEEEEeCCCchHHHHHHHH-cCeeccccCCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 11111 1111 3456677766 59987543 3 8875443 6789999999999988764
No 396
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=84.00 E-value=31 Score=30.87 Aligned_cols=94 Identities=14% Similarity=0.155 Sum_probs=54.7
Q ss_pred cCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCC
Q 012628 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (459)
Q Consensus 149 ~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~ 228 (459)
...|++ ..||..|..-+- ..+..|..|.+.+|....-...+...| ++..+.- . ++.+. +.
T Consensus 9 gk~vlV--vGgG~va~rk~~---~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~d----l~---- 68 (205)
T TIGR01470 9 GRAVLV--VGGGDVALRKAR---LLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADI----LE---- 68 (205)
T ss_pred CCeEEE--ECcCHHHHHHHH---HHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHH----hC----
Confidence 456777 788888877763 234567788888887653333333333 4444321 1 12222 22
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE-Eecc
Q 012628 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF-FDVA 270 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii-~Dea 270 (459)
...+++ ..+++| +.-++|++.|++.++++- +|+.
T Consensus 69 ~~~lVi-~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 69 GAFLVI-AATDDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred CcEEEE-ECCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 333444 455555 566789999999998873 5554
No 397
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=76.78 E-value=21 Score=27.48 Aligned_cols=71 Identities=7% Similarity=-0.048 Sum_probs=46.7
Q ss_pred CCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCee
Q 012628 186 TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (459)
Q Consensus 186 ~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~i 265 (459)
....|...++..|++.... - .+++..-....++..+.. ...+|++++. .+-.-...+-+.|+++|+.+
T Consensus 11 ~~~~~~~~~~~~G~~~~~h-g-~~~~~~~~~~~l~~~i~~---aD~VIv~t~~-------vsH~~~~~vk~~akk~~ip~ 78 (97)
T PF10087_consen 11 RERRYKRILEKYGGKLIHH-G-RDGGDEKKASRLPSKIKK---ADLVIVFTDY-------VSHNAMWKVKKAAKKYGIPI 78 (97)
T ss_pred cHHHHHHHHHHcCCEEEEE-e-cCCCCccchhHHHHhcCC---CCEEEEEeCC-------cChHHHHHHHHHHHHcCCcE
Confidence 3457888999999998888 2 223333333457777765 3445554332 23477888999999999988
Q ss_pred EEe
Q 012628 266 FFD 268 (459)
Q Consensus 266 i~D 268 (459)
+.=
T Consensus 79 ~~~ 81 (97)
T PF10087_consen 79 IYS 81 (97)
T ss_pred EEE
Confidence 743
No 398
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=76.16 E-value=59 Score=29.25 Aligned_cols=94 Identities=23% Similarity=0.355 Sum_probs=57.4
Q ss_pred ccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCC-cchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC
Q 012628 148 KEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW-GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (459)
Q Consensus 148 ~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y-~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~ 226 (459)
+...|++ ..||..|..-+ -..+..|..|.+-+|.. +......+..+.+.+. ..++.+.+.
T Consensus 11 ~~k~Vlv--vGgG~va~rKa---~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~--------~~~~~~~~~------ 71 (210)
T COG1648 11 EGKKVLV--VGGGSVALRKA---RLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE--------REFDAEDLD------ 71 (210)
T ss_pred CCCEEEE--ECCCHHHHHHH---HHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh--------cccChhhhc------
Confidence 3466887 78888888876 33356899999999998 3344444443322211 123444432
Q ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE-Eecc
Q 012628 227 PGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF-FDVA 270 (459)
Q Consensus 227 ~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii-~Dea 270 (459)
...+++. .-+|| +.=++|.+.|+++++++- +|+.
T Consensus 72 --~~~lvia-At~d~-------~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 72 --DAFLVIA-ATDDE-------ELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred --CceEEEE-eCCCH-------HHHHHHHHHHHHhCCceeccCCc
Confidence 2334443 33444 777899999999887664 4544
No 399
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=74.75 E-value=14 Score=35.52 Aligned_cols=107 Identities=21% Similarity=0.298 Sum_probs=66.1
Q ss_pred cccchhHHHHHHHHHHHhC-CCCEEEEcCC-CCcc-----hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCC
Q 012628 157 GLSGTGSLRLAAALIERYF-PGAKVLISSP-TWGN-----HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGG 229 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~-~gd~Vlv~~p-~y~~-----~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~ 229 (459)
...|+|=.-.++++...+. .|.+|++... +|.. .....+..|++++.-+. ..+.-.+-+++++.+... .
T Consensus 146 GVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~-G~DpAaVafDAi~~Akar---~ 221 (340)
T COG0552 146 GVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKE-GADPAAVAFDAIQAAKAR---G 221 (340)
T ss_pred ecCCCchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCC-CCCcHHHHHHHHHHHHHc---C
Confidence 4455555555666655554 7877777664 5531 22334567888776542 112223446667776665 3
Q ss_pred cEEEEeCCC---CCCCCCCCCHHHHHHHHHHHHhcC------CeeEEecc
Q 012628 230 SFILLHGCA---HNPTGIDPTPEQWEKIADVIQEKN------HIPFFDVA 270 (459)
Q Consensus 230 ~~~ii~~~p---~NPTG~~~s~~~l~~i~~l~~~~~------~~ii~Dea 270 (459)
.-++++.+. ||-+..+ +++++|.+++++.. ++++.|..
T Consensus 222 ~DvvliDTAGRLhnk~nLM---~EL~KI~rV~~k~~~~ap~e~llvlDAt 268 (340)
T COG0552 222 IDVVLIDTAGRLHNKKNLM---DELKKIVRVIKKDDPDAPHEILLVLDAT 268 (340)
T ss_pred CCEEEEeCcccccCchhHH---HHHHHHHHHhccccCCCCceEEEEEEcc
Confidence 334444443 8888888 99999999998754 66666877
No 400
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=71.40 E-value=10 Score=30.89 Aligned_cols=59 Identities=12% Similarity=0.133 Sum_probs=40.5
Q ss_pred CCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCC---CCCCCCCCCHHHHHHHHHHHHhcC
Q 012628 199 VPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA---HNPTGIDPTPEQWEKIADVIQEKN 262 (459)
Q Consensus 199 ~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p---~NPTG~~~s~~~l~~i~~l~~~~~ 262 (459)
.+++.+|. .+.+|++.+.+++... -..++++-|.| |+..|.......++.+-++..+.|
T Consensus 29 vriIrvpC----~Grv~~~~il~Af~~G-ADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 29 VRIIRVPC----SGRVDPEFILRAFEKG-ADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred eEEEEccC----CCccCHHHHHHHHHcC-CCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 45666665 5789999999999872 23334443443 568888888887777777776544
No 401
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=70.54 E-value=73 Score=30.50 Aligned_cols=51 Identities=16% Similarity=0.488 Sum_probs=33.5
Q ss_pred HHHHHHHHHc-CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 216 FEGMIADIKA-APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 216 ~e~l~~~i~~-~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
++.+.+.++. ..+...+++ +.+=|-|. +.+...+|+++|++.|..++.|..
T Consensus 116 ~~~~l~~~~~~l~~~d~Vvl--sGSlP~g~--~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 116 LEQFLEQLKALLESDDIVVL--SGSLPPGV--PPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred HHHHHHHHHHhcccCCEEEE--eCCCCCCC--CHHHHHHHHHHHHhcCCeEEEECC
Confidence 3444444444 223344443 34556554 468899999999999999999986
No 402
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=69.44 E-value=10 Score=36.85 Aligned_cols=69 Identities=10% Similarity=0.043 Sum_probs=46.5
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
...+...+..+..+.+.++.+|.+..+...+.-.. ... .....+.|-.+|++++++|++.|+++||-||
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~---ga~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEI---GGS----TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCccccccc---ccc----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 34444567777777776666777766555433211 110 1223466778999999999999999999888
No 403
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=68.35 E-value=12 Score=35.84 Aligned_cols=68 Identities=9% Similarity=0.015 Sum_probs=46.6
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
...+...+..+..+.+.++.+|.+..+.+.+.-.. ... .++ .+.|-.+|++++++|++.|+++|+-||
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~---g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEK---GGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhh---ccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 34444667888888887667777776655544332 111 111 244668999999999999999999887
No 404
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=67.42 E-value=31 Score=32.80 Aligned_cols=56 Identities=11% Similarity=0.090 Sum_probs=34.1
Q ss_pred cccCceEEeecccchhHHHHHHHHHHHhCCCC--EEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 147 ~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd--~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+.|...++..|+ |+.++.++ +++.. .|= .+++|+..-......++.+|++++.+|-
T Consensus 59 l~pG~tIVE~TS-GNTGI~LA--~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIVEATS-GNTGIALA--MVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEEEcCC-ChHHHHHH--HHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 346666665555 45556665 33333 343 3444443445678889999999999986
No 405
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=66.92 E-value=58 Score=29.44 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=45.5
Q ss_pred CCCEEEE-cCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHH
Q 012628 176 PGAKVLI-SSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKI 254 (459)
Q Consensus 176 ~gd~Vlv-~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i 254 (459)
++-.|.+ ..+.-......++..|++++..+++ |.+.|.++++. -..++++..+.++ ...+.-..+
T Consensus 21 ~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~g---~d~v~~~~~~~~~----~~~~~~~~l 86 (233)
T PF05368_consen 21 AGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALKG---VDAVFSVTPPSHP----SELEQQKNL 86 (233)
T ss_dssp TTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHTT---CSEEEEESSCSCC----CHHHHHHHH
T ss_pred CCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHcC---CceEEeecCcchh----hhhhhhhhH
Confidence 5544433 4443222344566789988766552 78999999986 4455554333332 223667889
Q ss_pred HHHHHhcCCeeEE
Q 012628 255 ADVIQEKNHIPFF 267 (459)
Q Consensus 255 ~~l~~~~~~~ii~ 267 (459)
++.|++.|+-.++
T Consensus 87 i~Aa~~agVk~~v 99 (233)
T PF05368_consen 87 IDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHT-SEEE
T ss_pred HHhhhccccceEE
Confidence 9999988765553
No 406
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=65.74 E-value=11 Score=36.90 Aligned_cols=64 Identities=13% Similarity=0.094 Sum_probs=45.9
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
...+...+..+..+.+.++.+|.+..+.+.+.-.. .. ...|-.+|++++++|++.|+++||-||
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~---ga---------~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 24 IDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKK---GA---------YSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhc---cC---------cCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 34444567778888887677788876666543322 11 134678999999999999999999888
No 407
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=64.58 E-value=1.2e+02 Score=29.12 Aligned_cols=144 Identities=14% Similarity=0.063 Sum_probs=82.7
Q ss_pred HHHHHHHHHHhhc-CC---CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCE
Q 012628 104 DVVKKAENLMLER-GE---NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAK 179 (459)
Q Consensus 104 ~~v~~a~~~~~~~-~~---~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~ 179 (459)
.+..+..++.+.+ +. ...|....|.......|++.+..+ ..++++ +.++..|-.++ ... .+--
T Consensus 45 d~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~~~------~~dviv--~i~tp~Aq~~~----s~~-~~iP 111 (322)
T COG2984 45 DAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLVGD------KPDVIV--AIATPAAQALV----SAT-KTIP 111 (322)
T ss_pred HHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhhcC------CCcEEE--ecCCHHHHHHH----Hhc-CCCC
Confidence 4444445555532 21 245666778888888899887765 345666 56666655554 222 2223
Q ss_pred EEEcCCC---CcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC-CCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012628 180 VLISSPT---WGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA-PGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (459)
Q Consensus 180 Vlv~~p~---y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~-~~~~~~ii~~~p~NPTG~~~s~~~l~~i~ 255 (459)
|++..-+ -......++.-|..+..+. ...+.++-.+.++.. |...++-++.+|+-+ -+...++++.
T Consensus 112 VV~aavtd~v~a~Lv~~~~~pg~NvTGvs------D~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~----ns~~l~eelk 181 (322)
T COG2984 112 VVFAAVTDPVGAKLVKSLEQPGGNVTGVS------DLLPVAQQIELIKALLPNAKSIGVLYNPGEA----NSVSLVEELK 181 (322)
T ss_pred EEEEccCchhhccCCccccCCCCceeecC------CcchHHHHHHHHHHhCCCCeeEEEEeCCCCc----ccHHHHHHHH
Confidence 4443322 1222333444455565552 234666666666653 334445455555433 4457889999
Q ss_pred HHHHhcCCeeEEecc
Q 012628 256 DVIQEKNHIPFFDVA 270 (459)
Q Consensus 256 ~l~~~~~~~ii~Dea 270 (459)
+.+++.|+-+++=.+
T Consensus 182 ~~A~~~Gl~vve~~v 196 (322)
T COG2984 182 KEARKAGLEVVEAAV 196 (322)
T ss_pred HHHHHCCCEEEEEec
Confidence 999999999997665
No 408
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=64.30 E-value=98 Score=27.96 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=63.6
Q ss_pred eEEeecccchhHHHHHHHHHHHhCCCCEEE-----EcC-C-CCc----ch---HHHhhhCCCCeeeeeeecCCCCCCCHH
Q 012628 152 VATVQGLSGTGSLRLAAALIERYFPGAKVL-----ISS-P-TWG----NH---KNIFNDARVPWSEYRYYDPKTVGLDFE 217 (459)
Q Consensus 152 i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vl-----v~~-p-~y~----~~---~~~~~~~G~~v~~v~~~~~~~~~~d~e 217 (459)
+.+ .+||..+...+. ..+..|..|. .+. + +|. +. .-.++..|.+++..+... ...-..+
T Consensus 4 ~aL--~SGGKDS~~Al~---~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve 76 (223)
T COG2102 4 IAL--YSGGKDSFYALY---LALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVE 76 (223)
T ss_pred EEE--EecCcHHHHHHH---HHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHH
Confidence 445 799999988763 2344554322 222 2 121 11 224556788887777632 2234678
Q ss_pred HHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 218 GMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 218 ~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
+|.++++.- +.-.++ +|.+.+..+..++=.+|++-|+-.+
T Consensus 77 ~L~~~l~~l--~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 77 ELKEALRRL--KVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHHHHhC--cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 888888763 223444 6999999999999999999998665
No 409
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=63.36 E-value=32 Score=33.23 Aligned_cols=76 Identities=16% Similarity=0.308 Sum_probs=52.0
Q ss_pred CCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCee
Q 012628 186 TWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIP 265 (459)
Q Consensus 186 ~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~i 265 (459)
.|+.|.+.++.--+++++++.... ...+-+.-++.. .+-+++ --|. .++.++.++|++.|+++| ++
T Consensus 60 ~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~~---~K~VL~----EKPl--a~n~~e~~~iveaA~~rg-v~ 125 (351)
T KOG2741|consen 60 AYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALNK---GKHVLC----EKPL--AMNVAEAEEIVEAAEARG-VF 125 (351)
T ss_pred cccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHHc---CCcEEe----cccc--cCCHHHHHHHHHHHHHcC-cE
Confidence 688999999999999999987322 234555555554 222333 4554 455699999999999999 56
Q ss_pred EEeccCCCCC
Q 012628 266 FFDVAYQGFA 275 (459)
Q Consensus 266 i~Deay~~~~ 275 (459)
+.|..+.-+.
T Consensus 126 ~meg~~~R~~ 135 (351)
T KOG2741|consen 126 FMEGLWWRFF 135 (351)
T ss_pred EEeeeeeecC
Confidence 6677655443
No 410
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=62.66 E-value=13 Score=35.66 Aligned_cols=61 Identities=8% Similarity=0.100 Sum_probs=41.0
Q ss_pred HHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 192 ~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
..+...+..+....+.++.+|.+..+.+.+.-.. . ..|-.+|++++++|++.|+++||-||
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~---g-----------~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQK---A-----------SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCcccccc---C-----------CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 3444567777777776666676665443321110 1 13567999999999999999999877
No 411
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=62.27 E-value=12 Score=39.33 Aligned_cols=37 Identities=14% Similarity=0.207 Sum_probs=32.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCC
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~ 277 (459)
|++.-|.- ++++++++-|+++||-||.|-+|..|..+
T Consensus 206 p~sryGtP---edfk~fVD~aH~~GIgViLD~V~~HF~~d 242 (628)
T COG0296 206 PTSRYGTP---EDFKALVDAAHQAGIGVILDWVPNHFPPD 242 (628)
T ss_pred ccccCCCH---HHHHHHHHHHHHcCCEEEEEecCCcCCCC
Confidence 55565655 99999999999999999999999999854
No 412
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=59.14 E-value=59 Score=29.29 Aligned_cols=86 Identities=15% Similarity=0.188 Sum_probs=58.1
Q ss_pred cCceEEeecccchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCC
Q 012628 149 EQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAP 227 (459)
Q Consensus 149 ~~~i~~~~t~ggt~a~~l~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~ 227 (459)
+.-|++ |.+++|++-.+ +..-+ ..|-.|+...-.-..........|.++..+++..++ +.-.++..+.+.+
T Consensus 7 ~k~VlI--tgcs~GGIG~a--la~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~----~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 7 PKKVLI--TGCSSGGIGYA--LAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPE----EVVTVSGEVRANP 78 (289)
T ss_pred CCeEEE--eecCCcchhHH--HHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChH----HHHHHHHHHhhCC
Confidence 566888 88888888887 33334 488899998877777777777889888888875332 3444555555555
Q ss_pred CCcEEEEeCCCCCCC
Q 012628 228 GGSFILLHGCAHNPT 242 (459)
Q Consensus 228 ~~~~~ii~~~p~NPT 242 (459)
....=++++|..-|.
T Consensus 79 ~Gkld~L~NNAG~~C 93 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSC 93 (289)
T ss_pred CCceEEEEcCCCCCc
Confidence 566666666654444
No 413
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=58.99 E-value=2.5e+02 Score=29.88 Aligned_cols=150 Identities=13% Similarity=0.147 Sum_probs=75.1
Q ss_pred ecccccCCCCCCccCcHHHHHHHHHHhhcCCCCCCCCCc-----cc----HHHHHHHHHHHhcCCCCccccCceEEeecc
Q 012628 88 LGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIE-----GL----AAFNKVTAELLFGADNSVLKEQRVATVQGL 158 (459)
Q Consensus 88 l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~-----g~----~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ 158 (459)
.+.|.| . ..+|+.+.+-+.+ ..++..+|+|.+ |- -.+...|+++ -|+++....+ .-
T Consensus 123 IGmGYy----n-~~vP~~I~RNile--np~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dl----TGL~~aNASL----LD 187 (1001)
T KOG2040|consen 123 IGMGYY----N-THVPAVILRNILE--NPGWYTQYTPYQAEISQGRLESLLNYQTMITDL----TGLPMANASL----LD 187 (1001)
T ss_pred hccccc----c-ccCcHHHHHHhhh--CCcceeccCCCchhhhhhhHHHHhhhHHhhhhc----cCCcccchhh----hc
Confidence 455665 2 2346666654443 235667888743 20 1112222222 2443333322 23
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCC
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p 238 (459)
-||.|-+.+. +.....++.+.++..-+|+....+++.. ++...+.+. ..|++...... +...-+++-.|
T Consensus 188 EgTAaaEAm~-l~~~~~krkk~vvd~~~hpqtlsV~~TR-a~~~~i~v~-----~~~~~~~~~s~----~~v~gvlvQYP 256 (1001)
T KOG2040|consen 188 EGTAAAEAMA-LCNRINKRKKFVVDSNCHPQTLSVVKTR-AKGFGIKVV-----VSDIKEADYSS----KDVSGVLVQYP 256 (1001)
T ss_pred cchhHHHHHH-HHHhhcccceEEecCCCCcchhhhhhcc-ccccceeEE-----ecCHHHhhccc----cceeEEEEEcC
Confidence 4444444432 3334557788999999999888777631 121222221 01222222111 13344444334
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~ 267 (459)
. --|.+ .++.++++.+++.|.++++
T Consensus 257 ~-t~G~i---~d~~el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 257 D-TEGSV---LDFDELVELAHANGSLVVM 281 (1001)
T ss_pred C-CCCcc---cCHHHHHHHhhccCceEEE
Confidence 3 33777 6677788888888877664
No 414
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=58.48 E-value=35 Score=24.28 Aligned_cols=23 Identities=17% Similarity=0.306 Sum_probs=18.4
Q ss_pred CC-HHHHHHHHHHHHhcCCeeEEe
Q 012628 246 PT-PEQWEKIADVIQEKNHIPFFD 268 (459)
Q Consensus 246 ~s-~~~l~~i~~l~~~~~~~ii~D 268 (459)
++ ++++++|.+++++=|.++|.|
T Consensus 47 ~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 47 LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CCchHHHHHHHHHHHcCCEEEEeC
Confidence 44 589999999999877777764
No 415
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=57.29 E-value=1.6e+02 Score=27.99 Aligned_cols=110 Identities=12% Similarity=0.062 Sum_probs=68.3
Q ss_pred cCceEEeecccchhHHHHHHHHHHHhCCCC--EEEEcC--CCCcchHHHhh--hCCCCeeeeeeecCCCCCCCHHHHHHH
Q 012628 149 EQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISS--PTWGNHKNIFN--DARVPWSEYRYYDPKTVGLDFEGMIAD 222 (459)
Q Consensus 149 ~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd--~Vlv~~--p~y~~~~~~~~--~~G~~v~~v~~~~~~~~~~d~e~l~~~ 222 (459)
.++|++ |.|.+...+.. +......|. .|+|.+ |.+.+|..... ..|++..-+|- .++.+.
T Consensus 162 snEviL--T~g~SrTV~~F--L~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~d----------aaVfA~ 227 (353)
T KOG1465|consen 162 SNEVIL--TLGSSRTVENF--LKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIPD----------AAVFAM 227 (353)
T ss_pred cCceEE--ecCccHHHHHH--HHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEecc----------HHHHHH
Confidence 577888 89887777775 333344443 466655 55555544333 34665544432 344455
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012628 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (459)
Q Consensus 223 i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~ 275 (459)
+.. -.++++-+..--+.|-+..+.-...++..|++|-+++++=.-..-+.
T Consensus 228 Msr---VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~yKLs 277 (353)
T KOG1465|consen 228 MSR---VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPMYKLS 277 (353)
T ss_pred hhh---cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecchhhcC
Confidence 554 45566655555666777777777789988999999888766544443
No 416
>PF09885 DUF2112: Uncharacterized protein conserved in archaea (DUF2112); InterPro: IPR012356 The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=57.03 E-value=20 Score=29.20 Aligned_cols=48 Identities=8% Similarity=0.133 Sum_probs=38.5
Q ss_pred eeecCC--CHHHHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 407 FSFTGL--NKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 407 f~~~~l--~~~~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|.++|. +.+++..|+++++|-+. -+.+.. ++++...+++.|.++++.|
T Consensus 94 FGC~GCartnEL~~~lir~k~iPiL---el~YP~-~~ee~~~~V~~I~~FL~~L 143 (143)
T PF09885_consen 94 FGCMGCARTNELTKYLIRQKGIPIL---ELKYPT-NEEEAIDFVNKINDFLKSL 143 (143)
T ss_pred ccccccccHHHHHHHHHhhcCCceE---EeeCCC-ChHHHHHHHHHHHHHHhcC
Confidence 566676 46889999999898765 456655 8999999999999999865
No 417
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=56.71 E-value=27 Score=35.51 Aligned_cols=76 Identities=9% Similarity=0.027 Sum_probs=46.2
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCc------EEEE---eCCC--CCCCCCCCCHHHHHHHHHHHH
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGS------FILL---HGCA--HNPTGIDPTPEQWEKIADVIQ 259 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~------~~ii---~~~p--~NPTG~~~s~~~l~~i~~l~~ 259 (459)
...+...+..+..+.+.++.+|++.++.+.+.......+. ..+. -..+ ..+.|-.+|++++++|++.|+
T Consensus 28 Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 28 LDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 3344456777777777766778877666554332100000 0010 0011 123466899999999999999
Q ss_pred hcCCeeE
Q 012628 260 EKNHIPF 266 (459)
Q Consensus 260 ~~~~~ii 266 (459)
++||-||
T Consensus 108 ~rgI~VI 114 (445)
T cd06569 108 ARHIEVI 114 (445)
T ss_pred HcCCEEE
Confidence 9999877
No 418
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=56.58 E-value=1.9e+02 Score=27.78 Aligned_cols=118 Identities=11% Similarity=0.010 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCC--CEEEEcC--CCCcchH--HHhhhCCCCeee
Q 012628 130 AFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGNHK--NIFNDARVPWSE 203 (459)
Q Consensus 130 ~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~g--d~Vlv~~--p~y~~~~--~~~~~~G~~v~~ 203 (459)
..++.|+++.... +..+.+++ |.|-++....+ +......| -+|++.+ |...+.. ..+...|.++..
T Consensus 105 ~~~~~I~~~a~~~----i~~g~~IL--T~~~S~tv~~~--l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtl 176 (310)
T PRK08535 105 NAVEKIGEIGAKR----IRDGDVIM--THCNSSAALSV--IKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTL 176 (310)
T ss_pred HHHHHHHHHHHHH----cCCCCEEE--EeCCcHHHHHH--HHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEE
Confidence 4556666553322 22455677 78877666554 23333333 4667665 5444432 334467888877
Q ss_pred eeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012628 204 YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (459)
Q Consensus 204 v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~D 268 (459)
++- ..+-..+.. -.++++=..-=-+.|.+.++-=-..++-+|+.|++.+++=
T Consensus 177 I~D----------sav~~~m~~---vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 177 IVD----------SAVRYFMKD---VDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred Eeh----------hHHHHHHHh---CCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 753 222333333 3445542333334455555555556888899999988863
No 419
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=54.46 E-value=1.8e+02 Score=27.92 Aligned_cols=132 Identities=16% Similarity=0.104 Sum_probs=69.2
Q ss_pred cHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhC-CCCEEEEcC--CCCcchHHHhhhCCCCeee-
Q 012628 128 LAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYF-PGAKVLISS--PTWGNHKNIFNDARVPWSE- 203 (459)
Q Consensus 128 ~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~-~gd~Vlv~~--p~y~~~~~~~~~~G~~v~~- 203 (459)
..++.+++++..... .-...-|.+...-||.|..-++..+...+. .|.+|++.+ |...... ...|.+...
T Consensus 75 ~~~l~~~l~~~~~~~---~~~~~vIav~~~KGGvGkTT~a~nLA~~la~~g~~VlLvD~D~~~~~~~---~~lg~~~~~~ 148 (322)
T TIGR03815 75 EGWLVELLADLDQSP---PARGVVVAVIGGRGGAGASTLAAALALAAARHGLRTLLVDADPWGGGLD---LLLGAEDVPG 148 (322)
T ss_pred HHHHHHHHHhhccCC---CCCceEEEEEcCCCCCcHHHHHHHHHHHHHhcCCCEEEEecCCCCCCee---eeecCCCCCC
Confidence 457777777652111 111234555445577666655444433333 576666654 4433211 122332110
Q ss_pred e---eeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 204 Y---RYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 204 v---~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
+ .+. .....+|.+.+.+.+.. ...+-+++.+.++ +..++.+.++++.+..+++-=++|+|-.
T Consensus 149 ~~~~~~~-~~~~~~~~~~l~~~~~~---~~~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p 213 (322)
T TIGR03815 149 LRWPDLS-QARGRLPAGALRDALPR---RGGLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLP 213 (322)
T ss_pred cCHHHHh-hcCCCcCHHHHHHhCCC---cCCeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCC
Confidence 0 110 11235666777666643 2234455555544 3457778889888888776668889987
No 420
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=52.76 E-value=2.1e+02 Score=27.24 Aligned_cols=102 Identities=14% Similarity=0.009 Sum_probs=57.9
Q ss_pred cCceEEeecccchhHHHHHHHHHHHhCCCC--EEEEcC--CCCcchH--HHhhhCCCCeeeeeeecCCCCCCCHHHHHHH
Q 012628 149 EQRVATVQGLSGTGSLRLAAALIERYFPGA--KVLISS--PTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIAD 222 (459)
Q Consensus 149 ~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd--~Vlv~~--p~y~~~~--~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~ 222 (459)
..+++. |.+-+.+..-+ +......|. +|+|.+ |.+.++. ..++..|.++..++- .++-..
T Consensus 119 dg~~Il--Th~~S~~v~~~--l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~D----------sa~~~~ 184 (301)
T COG1184 119 DGDVIL--THSFSKTVLEV--LKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVD----------SAVGAF 184 (301)
T ss_pred CCCEEE--EecCcHHHHHH--HHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEec----------hHHHHH
Confidence 467878 88877666665 333344554 677766 8877654 345677877766642 233334
Q ss_pred HHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012628 223 IKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (459)
Q Consensus 223 i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~ 267 (459)
++. -.++++=...---.|.++++-=---|+-.|++.+.++++
T Consensus 185 ~~~---vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 185 MSR---VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred HHh---CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 443 334444222222223444444344588889998887764
No 421
>PLN02955 8-amino-7-oxononanoate synthase
Probab=52.23 E-value=2.8e+02 Score=28.46 Aligned_cols=162 Identities=10% Similarity=0.044 Sum_probs=88.5
Q ss_pred CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhC-
Q 012628 119 NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDA- 197 (459)
Q Consensus 119 ~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~- 197 (459)
.+.|......++++++..+-+ .++|........ ..|.+....-+...++.+...+..++..-+|.....++...
T Consensus 109 SndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl----~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~ 183 (476)
T PLN02955 109 GNDYLGLSSHPTISNAAANAA-KEYGMGPKGSAL----ICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIG 183 (476)
T ss_pred ccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCc----cccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHh
Confidence 367888888899999988886 456654434444 34554444444445566655566777777876655555432
Q ss_pred --------------CCCeeeeeeecCCCCCCCHHHHHHHHHcCCC--CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012628 198 --------------RVPWSEYRYYDPKTVGLDFEGMIADIKAAPG--GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (459)
Q Consensus 198 --------------G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~--~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~ 261 (459)
+-.. .+=++ . ..=..+..-++-... ...++.. +||-. +.++++.+-+.+.
T Consensus 184 ~~~~~~~~~~~~~~~~~d-~i~~D-~----~~HaSI~dG~~ls~~~~~a~~~~f--~HND~------~~Le~~L~~~~~~ 249 (476)
T PLN02955 184 SVASLLAASGKPLKNEKV-AIFSD-A----LNHASIIDGVRLAERQGNVEVFVY--RHCDM------YHLNSLLSSCKMK 249 (476)
T ss_pred hccccccccccccCCCCc-EEEEe-c----cchHHHHHHHHhccccCCceEEEe--CCCCH------HHHHHHHHhCCCC
Confidence 1111 11111 1 122334444432111 1223332 45432 8888888766666
Q ss_pred CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcC
Q 012628 262 NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSY 302 (459)
Q Consensus 262 ~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 302 (459)
..+||+|.+|.--+.- .+...+..+..+.+-.+++.--
T Consensus 250 ~~~Vv~EgV~SmdGdi---apL~eL~~L~~~~ga~LiVDEA 287 (476)
T PLN02955 250 RKVVVTDSLFSMDGDF---APMEELSQLRKKYGFLLVIDDA 287 (476)
T ss_pred ceEEEEeCCCCCCCCc---CCHHHHHHHHHHcCcEEEEccc
Confidence 7899999998765521 2333444555555555665443
No 422
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=51.51 E-value=50 Score=26.10 Aligned_cols=68 Identities=18% Similarity=0.190 Sum_probs=33.3
Q ss_pred CcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 187 WGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 187 y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
|..+..++.....+++.+-+.. ....+....+++. +.-+++ -=|.+ .+.++.++|.+.++++|..+.
T Consensus 51 ~~~~~~ll~~~~~D~V~I~tp~----~~h~~~~~~~l~~---g~~v~~----EKP~~--~~~~~~~~l~~~a~~~~~~~~ 117 (120)
T PF01408_consen 51 YTDLEELLADEDVDAVIIATPP----SSHAEIAKKALEA---GKHVLV----EKPLA--LTLEEAEELVEAAKEKGVKVM 117 (120)
T ss_dssp ESSHHHHHHHTTESEEEEESSG----GGHHHHHHHHHHT---TSEEEE----ESSSS--SSHHHHHHHHHHHHHHTSCEE
T ss_pred hhHHHHHHHhhcCCEEEEecCC----cchHHHHHHHHHc---CCEEEE----EcCCc--CCHHHHHHHHHHHHHhCCEEE
Confidence 3344455554445555554421 1234455555554 333333 22322 245777777777777766655
Q ss_pred E
Q 012628 267 F 267 (459)
Q Consensus 267 ~ 267 (459)
+
T Consensus 118 V 118 (120)
T PF01408_consen 118 V 118 (120)
T ss_dssp E
T ss_pred E
Confidence 4
No 423
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=50.25 E-value=16 Score=38.85 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012628 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (459)
Q Consensus 237 ~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~ 275 (459)
+|+.|++.. ++++++++-|+++|+-||.|-+|...+
T Consensus 220 ~p~~~~~~~---~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 220 NPYDPATRI---RELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred CCCccchHH---HHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 456666655 999999999999999999999997765
No 424
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=49.55 E-value=99 Score=25.85 Aligned_cols=82 Identities=13% Similarity=0.097 Sum_probs=45.8
Q ss_pred CCEEEEcCCCCcchHHHhhhC-CCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012628 177 GAKVLISSPTWGNHKNIFNDA-RVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (459)
Q Consensus 177 gd~Vlv~~p~y~~~~~~~~~~-G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~ 255 (459)
|=+++.+. +....++.. |.++..+ ..+..++ + ..+.+.|.. +..-++++.| .|+|......+-..|.
T Consensus 32 Gf~l~AT~----gTa~~L~~~~Gi~v~~v-i~~~~gg--~-~~i~~~I~~---g~i~lVInt~-dp~~~~~~~~D~~~IR 99 (142)
T PRK05234 32 QHELYATG----TTGGLIQEATGLDVTRL-LSGPLGG--D-QQIGALIAE---GKIDMLIFFR-DPLTAQPHDPDVKALL 99 (142)
T ss_pred CCEEEEeC----hHHHHHHhccCCeeEEE-EcCCCCC--c-hhHHHHHHc---CceeEEEEec-CCCCCCcccchHHHHH
Confidence 55554443 234455666 8877776 3222222 2 446666765 3334444433 1133332135677899
Q ss_pred HHHHhcCCeeEEecc
Q 012628 256 DVIQEKNHIPFFDVA 270 (459)
Q Consensus 256 ~l~~~~~~~ii~Dea 270 (459)
+.|-+|++.++..-.
T Consensus 100 R~Av~~~IP~~T~l~ 114 (142)
T PRK05234 100 RLADVWNIPVATNRA 114 (142)
T ss_pred HHHHHcCCCEEcCHH
Confidence 999999999987544
No 425
>TIGR03271 methan_mark_5 putative methanogenesis marker protein 5. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=49.15 E-value=32 Score=27.94 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=38.0
Q ss_pred eeecCC--CHHHHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 407 FSFTGL--NKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 407 f~~~~l--~~~~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|.++|. +.++...|+++++|-+. .+-+.. ++++...++..|.++++.|
T Consensus 93 FGC~GCartnEL~~~lir~k~iPiL---El~YP~-~~e~~~~~V~~i~~FL~~l 142 (142)
T TIGR03271 93 FGCMGCARTNELTVFLVRRKDIPIL---ELDYPT-SEEEGIIFVRKINDFLDSL 142 (142)
T ss_pred ccccccccHHHHHHHHHhhcCCceE---EeeCCC-ChhHHHHHHHHHHHHHhcC
Confidence 566776 46888999999898765 455655 7899999999999998864
No 426
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=49.05 E-value=41 Score=33.06 Aligned_cols=75 Identities=15% Similarity=0.076 Sum_probs=44.4
Q ss_pred HhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC--CCCcEEEE--eCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012628 193 IFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA--PGGSFILL--HGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (459)
Q Consensus 193 ~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~--~~~~~~ii--~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~ 267 (459)
.+...+..+..+.+.++.+|++..+.+.+.-... ...+..-. ...-..|.|-.+|++++++|++.|+++||-||-
T Consensus 26 ~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VIP 104 (357)
T cd06563 26 LMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVIP 104 (357)
T ss_pred HHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEEE
Confidence 3445566777777766667777665554422110 00000000 001123447789999999999999999998873
No 427
>PLN02970 serine racemase
Probab=47.87 E-value=96 Score=30.04 Aligned_cols=54 Identities=13% Similarity=-0.097 Sum_probs=36.4
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+.|+. .++|+.++.++. ..+.+.-.-.|+++..+...-...++.+|++++.++-
T Consensus 76 ~~vv~--aSsGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 76 KGVVT--HSSGNHAAALAL-AAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred CeEEE--ECCcHHHHHHHH-HHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 34666 788888888873 2223333356777766655556778899999998864
No 428
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=47.86 E-value=2.5e+02 Score=26.84 Aligned_cols=104 Identities=13% Similarity=0.072 Sum_probs=60.4
Q ss_pred eEEeecccchhHHHHHHHHHHHhCCC-CEEEEc-CCC--CcchHH--HhhhCCCCeeeeeeecCCCC--CCCHHHHHHHH
Q 012628 152 VATVQGLSGTGSLRLAAALIERYFPG-AKVLIS-SPT--WGNHKN--IFNDARVPWSEYRYYDPKTV--GLDFEGMIADI 223 (459)
Q Consensus 152 i~~~~t~ggt~a~~l~~~~~~~~~~g-d~Vlv~-~p~--y~~~~~--~~~~~G~~v~~v~~~~~~~~--~~d~e~l~~~i 223 (459)
-++ |.||.+++++-......-.-| +.|++. .+. |....+ ..+.+|.+++.++- ..++ ...++.+.+.+
T Consensus 66 Tlv--T~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~--~~d~~~~~~~~~~~e~~ 141 (323)
T COG2515 66 TLV--TYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDA--GTDIGINASAEELAEEV 141 (323)
T ss_pred EEE--EecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecC--CCChhhchhhHHHHHHH
Confidence 555 899999998853222222223 344443 333 322222 33468999888876 3344 44567777777
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q 012628 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQE 260 (459)
Q Consensus 224 ~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~ 260 (459)
+..+.++.+|. .-..||-|..==.+-..||.+.+++
T Consensus 142 ~~~g~kpyvIp-~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 142 RKQGGKPYVIP-EGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred HhcCCCCcEec-cCCcCccccccHHHHHHHHHHHHhh
Confidence 76554444444 3347996554333777888888775
No 429
>smart00642 Aamy Alpha-amylase domain.
Probab=47.54 E-value=27 Score=30.05 Aligned_cols=28 Identities=14% Similarity=0.262 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012628 248 PEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (459)
Q Consensus 248 ~~~l~~i~~l~~~~~~~ii~Deay~~~~ 275 (459)
.++++++++-|+++|+-||.|-+....+
T Consensus 69 ~~d~~~lv~~~h~~Gi~vilD~V~NH~~ 96 (166)
T smart00642 69 MEDFKELVDAAHARGIKVILDVVINHTS 96 (166)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 3999999999999999999999966544
No 430
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=47.45 E-value=98 Score=29.56 Aligned_cols=17 Identities=0% Similarity=-0.365 Sum_probs=13.3
Q ss_pred hHHHhhhCCCCeeeeee
Q 012628 190 HKNIFNDARVPWSEYRY 206 (459)
Q Consensus 190 ~~~~~~~~G~~v~~v~~ 206 (459)
-...++.+|++++.++-
T Consensus 100 ~~~~~~~~Ga~v~~~~~ 116 (307)
T cd06449 100 NILLSRIMGADVRLVSA 116 (307)
T ss_pred cHHHHHHCCCEEEEECC
Confidence 35567899999998874
No 431
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=46.96 E-value=36 Score=27.09 Aligned_cols=48 Identities=8% Similarity=0.118 Sum_probs=38.3
Q ss_pred eeecCC--CHHHHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHHHHHHhhc
Q 012628 407 FSFTGL--NKAQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNV 458 (459)
Q Consensus 407 f~~~~l--~~~~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l~~~~~~~ 458 (459)
|.++|. +.+++.++++++||-+. ++-+.. ++|+-..++..|..+++.+
T Consensus 98 FGCiGC~RTNEl~~ylvR~k~iPiL---elkYP~-s~Eea~~~VnkI~~FL~sL 147 (152)
T COG4050 98 FGCIGCARTNELCVYLVRRKGIPIL---ELKYPR-SEEEAIDFVNKIANFLKSL 147 (152)
T ss_pred cceecccccchHHHHHhhhcCCceE---EEeCCC-cHHHHHHHHHHHHHHHHhh
Confidence 455665 46888999998898776 677766 8889999999999998865
No 432
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=46.91 E-value=16 Score=35.68 Aligned_cols=67 Identities=9% Similarity=0.015 Sum_probs=43.2
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
...+...+..+..+.+.+..+|.+.+..+.+.-... . . .++.+ |..+|++++++|++.|+++||-||
T Consensus 24 id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~g---a--~---~~~~~-~~~yT~~di~~lv~yA~~~gI~VI 90 (351)
T PF00728_consen 24 IDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKG---A--Y---RPSDA-GGYYTKEDIRELVAYAKERGIEVI 90 (351)
T ss_dssp HHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTT---T--E---STTCT-ESEBEHHHHHHHHHHHHHTT-EEE
T ss_pred HHHHHHcCCcEEEEEEecCCCCccccCCCccccccC---c--c---ccccc-cccCCHHHHHHHHHHHHHcCCcee
Confidence 334446788888888877777887765554443320 0 0 01113 449999999999999999998887
No 433
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=46.88 E-value=3.1e+02 Score=27.35 Aligned_cols=157 Identities=10% Similarity=0.058 Sum_probs=89.3
Q ss_pred CCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCC
Q 012628 119 NKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDAR 198 (459)
Q Consensus 119 ~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G 198 (459)
.+.|.-....++++++..+-+.. +|......+. +.|.+....-+..-++.+..-+..++...+|.....++...-
T Consensus 46 SNdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~----i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~ 120 (388)
T COG0156 46 SNDYLGLASHPELIEAAKAAIRR-YGVGAGGSRL----ISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALL 120 (388)
T ss_pred ccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCc----ccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhc
Confidence 36787777778888888877644 4444434443 355555555454455566555678888889877666666432
Q ss_pred C--CeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc---CCeeEEeccCCC
Q 012628 199 V--PWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK---NHIPFFDVAYQG 273 (459)
Q Consensus 199 ~--~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~---~~~ii~Deay~~ 273 (459)
- .++..+ + ++=..+.+-++-. +...+.. .||- .+.++++.+-+++. ..+|++|.+|+-
T Consensus 121 ~~~dli~~D---~----lnHASiidG~rls--~a~~~~f--~HnD------~~~Le~~l~~~~~~~~~~~~IvtegVfSM 183 (388)
T COG0156 121 KKGDLIFSD---E----LNHASIIDGIRLS--RAEVRRF--KHND------LDHLEALLEEARENGARRKLIVTEGVFSM 183 (388)
T ss_pred CCCcEEEEe---c----hhhhhHHHHHHhC--CCcEEEe--cCCC------HHHHHHHHHhhhccCCCceEEEEeccccC
Confidence 2 222221 1 2223455555431 3333433 3433 27888887766544 499999999875
Q ss_pred CCCCCCCCChhHHHHHHhcCCeEEEEE
Q 012628 274 FASGSLDNDASSVRLFATRGMELLVAQ 300 (459)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (459)
-+.- .+...+..+.+..+-.+++.
T Consensus 184 dGdi---ApL~~l~~L~~ky~a~L~VD 207 (388)
T COG0156 184 DGDI---APLPELVELAEKYGALLYVD 207 (388)
T ss_pred CCCc---CCHHHHHHHHHHhCcEEEEE
Confidence 5421 22334444445555555554
No 434
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=46.37 E-value=2e+02 Score=25.24 Aligned_cols=100 Identities=12% Similarity=0.102 Sum_probs=43.7
Q ss_pred ceEEeecccchhHHHHHHHHHHHhC---CCCEEEEcCCCCcchHHHhhhC--CCCeeeeeeecCCCCCCCHHHHHHHHHc
Q 012628 151 RVATVQGLSGTGSLRLAAALIERYF---PGAKVLISSPTWGNHKNIFNDA--RVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (459)
Q Consensus 151 ~i~~~~t~ggt~a~~l~~~~~~~~~---~gd~Vlv~~p~y~~~~~~~~~~--G~~v~~v~~~~~~~~~~d~e~l~~~i~~ 225 (459)
.++.++..+..|...+. .++..+. |+-.|+++..+-.++....+.. ++.+.++|++ .......+.+.+++
T Consensus 22 ~~iWiHa~SvGE~~a~~-~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~P~D----~~~~~~rfl~~~~P 96 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAAR-PLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYLPLD----FPWAVRRFLDHWRP 96 (186)
T ss_dssp T-EEEE-SSHHHHHHHH-HHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE---S----SHHHHHHHHHHH--
T ss_pred CcEEEEECCHHHHHHHH-HHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEeCcc----CHHHHHHHHHHhCC
Confidence 55554444444444333 3444443 6889999887777776665543 4566777762 22234555555553
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 226 ~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
. .++++-+ |-|-.+...|++.|+.++.=++
T Consensus 97 ---~-~~i~~Et-----------ElWPnll~~a~~~~ip~~LvNa 126 (186)
T PF04413_consen 97 ---D-LLIWVET-----------ELWPNLLREAKRRGIPVVLVNA 126 (186)
T ss_dssp ---S-EEEEES---------------HHHHHH-----S-EEEEEE
T ss_pred ---C-EEEEEcc-----------ccCHHHHHHHhhcCCCEEEEee
Confidence 3 3444322 6688899999999987664333
No 435
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=46.35 E-value=2.4e+02 Score=26.48 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=16.3
Q ss_pred HHHHHHHHHHH------hcCCeeEEecc
Q 012628 249 EQWEKIADVIQ------EKNHIPFFDVA 270 (459)
Q Consensus 249 ~~l~~i~~l~~------~~~~~ii~Dea 270 (459)
++++++.+++. .++++++.|..
T Consensus 174 ~el~~~~~~~~~~~~~~~~~~~LVl~a~ 201 (272)
T TIGR00064 174 DELKKIKRVIKKVDKDAPDEVLLVLDAT 201 (272)
T ss_pred HHHHHHHHHHhcccCCCCceEEEEEECC
Confidence 45667777776 67888888886
No 436
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=46.22 E-value=2.7e+02 Score=28.36 Aligned_cols=128 Identities=11% Similarity=-0.010 Sum_probs=75.9
Q ss_pred cccHHHHHHHHHHHhcCCCC-----------ccccCceEEeecccchhHHHHHHHHHHHhC--CCCEEEEcC--CCCcch
Q 012628 126 EGLAAFNKVTAELLFGADNS-----------VLKEQRVATVQGLSGTGSLRLAAALIERYF--PGAKVLISS--PTWGNH 190 (459)
Q Consensus 126 ~g~~~lr~aia~~l~~~~~~-----------~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~--~gd~Vlv~~--p~y~~~ 190 (459)
++-++|++.|-+|+..+... .+...++++ |-|.+..++.+ ++.... +.=+|+|.+ |.+.+-
T Consensus 325 eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdvil--tyg~s~vV~~i--ll~A~~~~k~frVvVVDSRP~~EG~ 400 (556)
T KOG1467|consen 325 EAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLL--TYGSSSVVNMI--LLEAKELGKKFRVVVVDSRPNLEGR 400 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEE--EecchHHHHHH--HHHHHHhCcceEEEEEeCCCCcchH
Confidence 34455665555555433211 133556777 88888888877 444443 322444433 555443
Q ss_pred --HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE-
Q 012628 191 --KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF- 267 (459)
Q Consensus 191 --~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~- 267 (459)
...+...|..+.++-+.. +--... +-+++++=++.----|.+|++.--..|+=+++.|++.+|+
T Consensus 401 ~~lr~Lv~~GinctYv~I~a----------~syim~---evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVC 467 (556)
T KOG1467|consen 401 KLLRRLVDRGINCTYVLINA----------ASYIML---EVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVC 467 (556)
T ss_pred HHHHHHHHcCCCeEEEEehh----------HHHHHH---hcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEE
Confidence 334456788877776621 111122 2567777555555568999988888888889999998875
Q ss_pred ecc
Q 012628 268 DVA 270 (459)
Q Consensus 268 Dea 270 (459)
=|+
T Consensus 468 CE~ 470 (556)
T KOG1467|consen 468 CEA 470 (556)
T ss_pred ech
Confidence 344
No 437
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=46.05 E-value=2.7e+02 Score=26.56 Aligned_cols=118 Identities=11% Similarity=0.054 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCC--CEEEEcC--CCCcch--HHHhhhCCCCee
Q 012628 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGNH--KNIFNDARVPWS 202 (459)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~g--d~Vlv~~--p~y~~~--~~~~~~~G~~v~ 202 (459)
...++.|+++.... +....+++ |.|-++..... +......| =+|++.+ |.+.+. ...+...|.++.
T Consensus 99 ~~a~~~I~~~a~~~----i~~g~~IL--T~~~S~tv~~~--l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vt 170 (301)
T TIGR00511 99 DKAQERIGEIGAKR----IRDGDVVM--THCNSEAALSV--IKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVT 170 (301)
T ss_pred HHHHHHHHHHHHHH----cCCCCEEE--EECCcHHHHHH--HHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEE
Confidence 34556666553322 12345667 77766655544 22223333 3566665 555443 233446788777
Q ss_pred eeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012628 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (459)
Q Consensus 203 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~ 267 (459)
.++- ..+-..+.+ -.++++=..---+.|.++++-=-..++-.|+.+++.+++
T Consensus 171 lI~D----------sa~~~~m~~---vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 171 LIVD----------SAVRYFMKE---VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred EEeh----------hHHHHHHHh---CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 7753 222233333 344554222223334444444444688889999998886
No 438
>PRK08246 threonine dehydratase; Provisional
Probab=45.76 E-value=2.1e+02 Score=27.33 Aligned_cols=74 Identities=14% Similarity=-0.005 Sum_probs=45.6
Q ss_pred CcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeee
Q 012628 125 IEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEY 204 (459)
Q Consensus 125 ~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v 204 (459)
..|.-..|-++........ ..+.|+. .++|+.+..++.. .+.+.-.-.|+++...-..-...++.+|++++.+
T Consensus 48 ptGS~K~R~a~~~~~~~~~----~~~~vv~--aSsGN~g~a~A~~-a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~ 120 (310)
T PRK08246 48 HTGSFKARGAFNRLLAAPV----PAAGVVA--ASGGNAGLAVAYA-AAALGVPATVFVPETAPPAKVARLRALGAEVVVV 120 (310)
T ss_pred CCCCCHHHHHHHHHHhhcc----cCCeEEE--eCCCHHHHHHHHH-HHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEe
Confidence 3455566666554433221 1355666 7888888888732 2233333567777665555667888999999887
Q ss_pred e
Q 012628 205 R 205 (459)
Q Consensus 205 ~ 205 (459)
+
T Consensus 121 ~ 121 (310)
T PRK08246 121 G 121 (310)
T ss_pred C
Confidence 5
No 439
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=45.29 E-value=2.7e+02 Score=26.18 Aligned_cols=141 Identities=14% Similarity=0.169 Sum_probs=72.1
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCCCEEEE
Q 012628 103 LDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLI 182 (459)
Q Consensus 103 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv 182 (459)
-|...+++...-+.+...-+-.+.+ ...++.+++.+....++++++++|+. + +..+.. ++....++.+|++
T Consensus 26 ipga~e~l~~L~~~g~~~iflTNn~-~~s~~~~~~~L~~~~~~~~~~~~i~T---S-~~at~~----~l~~~~~~~kv~v 96 (269)
T COG0647 26 IPGAAEALKRLKAAGKPVIFLTNNS-TRSREVVAARLSSLGGVDVTPDDIVT---S-GDATAD----YLAKQKPGKKVYV 96 (269)
T ss_pred CchHHHHHHHHHHcCCeEEEEeCCC-CCCHHHHHHHHHhhcCCCCCHHHeec---H-HHHHHH----HHHhhCCCCEEEE
Confidence 4556666666554432222222211 13345455555554567777888753 3 322222 2334456678887
Q ss_pred cCCCCcchHHHhhhCCCCeee---------eeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCC----CCCCCCCCCHH
Q 012628 183 SSPTWGNHKNIFNDARVPWSE---------YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA----HNPTGIDPTPE 249 (459)
Q Consensus 183 ~~p~y~~~~~~~~~~G~~v~~---------v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p----~NPTG~~~s~~ 249 (459)
.... .....++.+|++++. +-+ ..+..+++|.+.+++.....+..+|. +|| .++-|..+-.-
T Consensus 97 iG~~--~l~~~l~~~G~~~~~~~~~~~~d~Vv~--g~d~~~~~e~l~~a~~~i~~g~~fI~-tNpD~~~p~~~g~~pgaG 171 (269)
T COG0647 97 IGEE--GLKEELEGAGFELVDEEEPARVDAVVV--GLDRTLTYEKLAEALLAIAAGAPFIA-TNPDLTVPTERGLRPGAG 171 (269)
T ss_pred ECCc--chHHHHHhCCcEEeccCCCCcccEEEE--ecCCCCCHHHHHHHHHHHHcCCcEEE-eCCCccccCCCCCccCcH
Confidence 7644 666777777765443 222 12345678888777655333543333 444 33335554444
Q ss_pred HHHHHHHH
Q 012628 250 QWEKIADV 257 (459)
Q Consensus 250 ~l~~i~~l 257 (459)
-+.+.++.
T Consensus 172 ai~~~~~~ 179 (269)
T COG0647 172 AIAALLEQ 179 (269)
T ss_pred HHHHHHHH
Confidence 44444443
No 440
>PRK06500 short chain dehydrogenase; Provisional
Probab=44.46 E-value=2e+02 Score=25.86 Aligned_cols=48 Identities=17% Similarity=0.075 Sum_probs=26.9
Q ss_pred cccchhHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 157 GLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
..|+++++-.. +... ...|.+|++..-.-.......+..|.++..+..
T Consensus 11 ItGasg~iG~~--la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 59 (249)
T PRK06500 11 ITGGTSGIGLE--TARQFLAEGARVAITGRDPASLEAARAELGESALVIRA 59 (249)
T ss_pred EeCCCchHHHH--HHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEe
Confidence 46777777664 2222 347777777654322333344455667666665
No 441
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=43.36 E-value=3e+02 Score=26.30 Aligned_cols=80 Identities=8% Similarity=-0.090 Sum_probs=42.6
Q ss_pred CEEEEcC--CCCcc-h--HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 012628 178 AKVLISS--PTWGN-H--KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWE 252 (459)
Q Consensus 178 d~Vlv~~--p~y~~-~--~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~ 252 (459)
-+|++.+ |...+ . ...+...|.++..++- ..+-..+.. ..-.++++=..--.+.|.++++-=--
T Consensus 153 ~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI~D----------sa~~~~m~~-~~vd~VlvGAd~v~~nG~v~nk~GT~ 221 (303)
T TIGR00524 153 IRVIACETRPRNQGSRLTAWELMQDGIDVTLITD----------SMAAYFMQK-GEIDAVIVGADRIARNGDVANKIGTY 221 (303)
T ss_pred eEEEECCCCCccchHHHHHHHHHHCCCCEEEECh----------hHHHHHccc-cCCCEEEEcccEEecCCCEeEhhhHH
Confidence 4677764 76655 3 2445567877777642 222223331 12344444222233334444444444
Q ss_pred HHHHHHHhcCCeeEEe
Q 012628 253 KIADVIQEKNHIPFFD 268 (459)
Q Consensus 253 ~i~~l~~~~~~~ii~D 268 (459)
.++-+|+.|++.+++=
T Consensus 222 ~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 222 QLAVLAKEFRIPFFVA 237 (303)
T ss_pred HHHHHHHHhCCCEEEe
Confidence 5888889999988864
No 442
>COG1909 Uncharacterized protein conserved in archaea [Function unknown]
Probab=42.86 E-value=1.3e+02 Score=25.71 Aligned_cols=77 Identities=22% Similarity=0.247 Sum_probs=42.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhc-CCeeEEeccCCCCCCCCCCCChhHHHHHHhcCCeEEEEEcCCcCcccCCCCcceE
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEK-NHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAM 316 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~-~~~ii~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 316 (459)
..||-|++ |.+-|+.|.+.+... .+.|++|.= .++. .++...-...+.+++ ||.|+..+-.+
T Consensus 84 V~NpPGtI-t~el~~ai~~a~~~~k~~~I~V~GE-EDLa---------~lp~i~~ap~~tvV~------YGqP~~GvV~l 146 (167)
T COG1909 84 VRNPPGTI-TFELIKAIEKALEDGKRVRIFVDGE-EDLA---------VLPAILYAPLGTVVL------YGQPDEGVVAL 146 (167)
T ss_pred EeCCCcEe-EHHHHHHHHHHHhcCCcEEEEEeCh-hHHH---------HhHHHhhcCCCCEEE------eCCCCCcEEEE
Confidence 48999987 667788888887654 467777754 3332 333322222344444 56788533333
Q ss_pred EEEeCChhHHHHHHHHHH
Q 012628 317 NVVCSSSDLAARVKSQLK 334 (459)
Q Consensus 317 ~~v~~~~~~~~~~~~~~~ 334 (459)
-+ +++...++.+.+.
T Consensus 147 ~V---~~~~k~~v~~ll~ 161 (167)
T COG1909 147 RV---TEELKEEVLELLA 161 (167)
T ss_pred Ee---cHHHHHHHHHHHH
Confidence 33 5554444444443
No 443
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=42.60 E-value=1.6e+02 Score=28.28 Aligned_cols=54 Identities=13% Similarity=0.034 Sum_probs=32.1
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+.|+. .++|+.+..++.. .+.+.-.-.|+++.-.-..-...++.+|++++.++-
T Consensus 52 ~~vv~--aSsGN~g~alA~~-a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~ 105 (316)
T cd06448 52 VHVVC--SSGGNAGLAAAYA-ARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGK 105 (316)
T ss_pred CeEEE--eCCcHHHHHHHHH-HHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 34554 5677777777621 222222245555554434456778899999988753
No 444
>PRK08638 threonine dehydratase; Validated
Probab=42.55 E-value=1.1e+02 Score=29.78 Aligned_cols=53 Identities=9% Similarity=-0.090 Sum_probs=34.6
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR 205 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~ 205 (459)
..|+. .++|+.+..++.. .+.+.-.-.|++++.....-...++.+|++++.++
T Consensus 76 ~~vv~--~SsGN~g~alA~~-aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 76 KGVVA--CSAGNHAQGVALS-CALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred CeEEE--eCCcHHHHHHHHH-HHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 34655 7788888888732 22233335666666555556678889999998774
No 445
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=42.26 E-value=1.5e+02 Score=28.54 Aligned_cols=54 Identities=17% Similarity=-0.045 Sum_probs=33.7
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+.|+. .++|+.+..++. ..+.+.-.-.|+++...-..-...++..|++++.++-
T Consensus 71 ~~vv~--~SsGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 71 KAVAC--ASTGNTSASLAA-YAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred CEEEE--eCCCHHHHHHHH-HHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 45665 678888888772 2222333345666554433456678889999988753
No 446
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=42.24 E-value=2.3e+02 Score=25.08 Aligned_cols=34 Identities=12% Similarity=0.098 Sum_probs=25.1
Q ss_pred CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012628 228 GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (459)
Q Consensus 228 ~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~D 268 (459)
++..++++++ +|.. ..+.++++.++++|+.+|.=
T Consensus 109 ~gDvli~iS~----SG~s---~~v~~a~~~Ak~~G~~vI~I 142 (196)
T PRK10886 109 AGDVLLAIST----RGNS---RDIVKAVEAAVTRDMTIVAL 142 (196)
T ss_pred CCCEEEEEeC----CCCC---HHHHHHHHHHHHCCCEEEEE
Confidence 3566666543 4555 78999999999999988853
No 447
>COG0134 TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
Probab=42.20 E-value=1e+02 Score=28.59 Aligned_cols=73 Identities=19% Similarity=0.232 Sum_probs=51.3
Q ss_pred CCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012628 176 PGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (459)
Q Consensus 176 ~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~ 255 (459)
-|-.++++..........++ .|++++.|.-.+-.++.+|++..++.....|....+|.- +|+ .++++++++.
T Consensus 155 LGm~~LVEVh~~eEl~rAl~-~ga~iIGINnRdL~tf~vdl~~t~~la~~~p~~~~~IsE------SGI-~~~~dv~~l~ 226 (254)
T COG0134 155 LGMEVLVEVHNEEELERALK-LGAKIIGINNRDLTTLEVDLETTEKLAPLIPKDVILISE------SGI-STPEDVRRLA 226 (254)
T ss_pred cCCeeEEEECCHHHHHHHHh-CCCCEEEEeCCCcchheecHHHHHHHHhhCCCCcEEEec------CCC-CCHHHHHHHH
Confidence 47789998887777776666 899999998776678888988887776665555444442 333 3457766665
Q ss_pred H
Q 012628 256 D 256 (459)
Q Consensus 256 ~ 256 (459)
+
T Consensus 227 ~ 227 (254)
T COG0134 227 K 227 (254)
T ss_pred H
Confidence 4
No 448
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=42.16 E-value=1.4e+02 Score=28.36 Aligned_cols=54 Identities=9% Similarity=-0.019 Sum_probs=32.7
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+.|+. .++|+.+..++. ..+.+.-.-.|+++.-....-...++.+|++++.++-
T Consensus 66 ~~iv~--~ssGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 66 KGVVA--ASAGNHAQGVAY-AAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred CcEEE--ECCCHHHHHHHH-HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34665 677888877763 2222222244555543434456678899999988864
No 449
>PRK08265 short chain dehydrogenase; Provisional
Probab=41.79 E-value=2.2e+02 Score=26.08 Aligned_cols=94 Identities=15% Similarity=0.042 Sum_probs=45.3
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc---CCCCcEEE
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFIL 233 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~i 233 (459)
..|+++++-... .......|.+|++.+-.-.......+..+.++..++.+- -|.+.+++.++. ...+..++
T Consensus 11 ItGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 11 VTGGATLIGAAV-ARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDI-----TDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEE
Confidence 467777766642 122244788888765443233334444455666665531 244555544432 11123345
Q ss_pred EeCCCC-CCCCCCCCHHHHHHHHH
Q 012628 234 LHGCAH-NPTGIDPTPEQWEKIAD 256 (459)
Q Consensus 234 i~~~p~-NPTG~~~s~~~l~~i~~ 256 (459)
+.+... .+.+...+.+++++..+
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHh
Confidence 533321 22233455666666554
No 450
>PRK06483 dihydromonapterin reductase; Provisional
Probab=41.54 E-value=2.4e+02 Score=25.28 Aligned_cols=43 Identities=19% Similarity=0.040 Sum_probs=21.8
Q ss_pred cccchhHHHHHHHHHH-HhCCCCEEEEcCCCCcchHHHhhhCCCCe
Q 012628 157 GLSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPW 201 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~-~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v 201 (459)
..|+++++-.. +.. ....|.+|++..-.-......++..|+..
T Consensus 7 ItGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 50 (236)
T PRK06483 7 ITGAGQRIGLA--LAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQC 50 (236)
T ss_pred EECCCChHHHH--HHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEE
Confidence 36666666654 222 23478888776543322333334445433
No 451
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=40.64 E-value=1.7e+02 Score=27.21 Aligned_cols=106 Identities=15% Similarity=0.089 Sum_probs=53.3
Q ss_pred CceEEeecccc---hhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcC
Q 012628 150 QRVATVQGLSG---TGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (459)
Q Consensus 150 ~~i~~~~t~gg---t~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~ 226 (459)
.+|.+ ..|. |+|-+.++.....+...-..+..+| +...+++.+--+.+--|+.+..+ +.+.+++.+..
T Consensus 31 GrvgV--iGGc~eYTGAPYFaa~sa~~~GaDL~HiFCe~---~Aa~vIKsYsPdLIVHP~l~~~~---av~~i~k~L~R- 101 (306)
T KOG3974|consen 31 GRVGV--IGGCLEYTGAPYFAAISALRVGADLSHIFCEP---EAAVVIKSYSPDLIVHPVLDQEN---AVDIIEKLLQR- 101 (306)
T ss_pred cceEE--EcccccccCccHHHHHHHHHhccceeeeeech---hHHHHHhhcCCceeecccccCCc---hHhHHHHHHhh-
Confidence 35665 3444 6666665322212222223333333 34455565555555555432221 34445554543
Q ss_pred CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 227 PGGSFILLHGCAHNPTGID-PTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 227 ~~~~~~ii~~~p~NPTG~~-~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
-..++| .. =.|.. .-...+++|.++++++++.+++|.=
T Consensus 102 --lhavVI-GP---GLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 102 --LHAVVI-GP---GLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred --eeEEEE-CC---CCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 334444 21 12331 1125577888889999999999974
No 452
>PRK07476 eutB threonine dehydratase; Provisional
Probab=40.53 E-value=2.4e+02 Score=27.12 Aligned_cols=52 Identities=15% Similarity=-0.015 Sum_probs=33.4
Q ss_pred eEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 152 VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 152 i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
|+. .++|+.+..++. ..+.+.-.-.|+++...-..-...++.+|++++.++-
T Consensus 70 vv~--aSsGN~g~alA~-~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~ 121 (322)
T PRK07476 70 VVT--ASTGNHGRALAY-AARALGIRATICMSRLVPANKVDAIRALGAEVRIVGR 121 (322)
T ss_pred EEE--ECCChHHHHHHH-HHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 666 688888888873 2222332245555554444566778899999988863
No 453
>PRK05638 threonine synthase; Validated
Probab=39.87 E-value=1.4e+02 Score=30.27 Aligned_cols=53 Identities=13% Similarity=-0.017 Sum_probs=33.1
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR 205 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~ 205 (459)
+.|+. .++|+.+..++.. .+...-.-.|++|.-.-..-...++.+|++++.++
T Consensus 113 ~~vv~--aSsGN~g~alA~~-aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 113 NGFIV--ASDGNAAASVAAY-SARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred CEEEE--eCCChHHHHHHHH-HHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 55666 7778888777632 22222224566655443445667788999999885
No 454
>PLN02565 cysteine synthase
Probab=39.28 E-value=2e+02 Score=27.71 Aligned_cols=51 Identities=10% Similarity=-0.058 Sum_probs=33.1
Q ss_pred eEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeee
Q 012628 152 VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYR 205 (459)
Q Consensus 152 i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~ 205 (459)
|+. .++|+.+..++. ..+.+.-.-.|++|.-+-..-...++.+|++++.++
T Consensus 70 vv~--aSsGN~g~alA~-~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~ 120 (322)
T PLN02565 70 LIE--PTSGNTGIGLAF-MAAAKGYKLIITMPASMSLERRIILLAFGAELVLTD 120 (322)
T ss_pred EEE--ECCChHHHHHHH-HHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeC
Confidence 554 778888888873 222233224555655555556778899999998764
No 455
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=38.24 E-value=1.9e+02 Score=28.48 Aligned_cols=84 Identities=12% Similarity=-0.039 Sum_probs=44.9
Q ss_pred eEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcE
Q 012628 152 VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSF 231 (459)
Q Consensus 152 i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~ 231 (459)
|+. .++|+.+..++.. .+.+.=.-.|+++.-.-..-...++.+|++++.++- ..+..-..+...+..++ ..-
T Consensus 114 vV~--aSsGN~G~alA~~-a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~--~~~~~~~~~~a~~l~~~---~~~ 185 (368)
T PLN02556 114 LIE--PTSGNMGISLAFM-AAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP--TKGMGGTVKKAYELLES---TPD 185 (368)
T ss_pred EEE--eCCchHHHHHHHH-HHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CCCccHHHHHHHHHHHh---cCC
Confidence 444 6788888888731 122222245555554444556778899999998763 11111223444444443 222
Q ss_pred EEEeCCCCCCCC
Q 012628 232 ILLHGCAHNPTG 243 (459)
Q Consensus 232 ~ii~~~p~NPTG 243 (459)
.++++..+||.+
T Consensus 186 ~~~~~q~~np~~ 197 (368)
T PLN02556 186 AFMLQQFSNPAN 197 (368)
T ss_pred CCccCCCCCHHH
Confidence 344444567754
No 456
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=37.90 E-value=2.9e+02 Score=25.05 Aligned_cols=96 Identities=11% Similarity=0.044 Sum_probs=57.8
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEE--cCCC------C-----cchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHH
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLI--SSPT------W-----GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv--~~p~------y-----~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i 223 (459)
.+||..+...+.++... .+.+.+ ..|. | .-....++..|...+.+... ....-..+++.+.+
T Consensus 7 ~SGGKDS~lAl~~~~~~---~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~--~~~e~~~~~l~~~l 81 (222)
T TIGR00289 7 YSGGKDSILALYKALEE---HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTS--GEEEKEVEDLAGQL 81 (222)
T ss_pred ecCcHHHHHHHHHHHHc---CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcC--CchhHHHHHHHHHH
Confidence 68998888887555443 232221 1121 1 12234556778887766652 11122355565556
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 224 ~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
++. +...++ +|.+.+..+...+-++|.+-|+-.+
T Consensus 82 ~~~--gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 82 GEL--DVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHc--CCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 542 333344 6999999999999999999888655
No 457
>PLN03244 alpha-amylase; Provisional
Probab=37.89 E-value=53 Score=35.63 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=33.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCCC
Q 012628 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASG 277 (459)
Q Consensus 237 ~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~~ 277 (459)
++--|+...-++++++++++.|++.|+-||.|-+|..++.+
T Consensus 429 ~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 429 NFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 33345555556799999999999999999999999888743
No 458
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=37.72 E-value=2.9e+02 Score=26.67 Aligned_cols=29 Identities=14% Similarity=0.100 Sum_probs=14.7
Q ss_pred CEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 178 AKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 178 d~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
..++..+|.-......++..+.....++.
T Consensus 103 Gi~~~SSPfd~~svd~l~~~~~~ayKIaS 131 (347)
T COG2089 103 GIIFFSSPFDLTAVDLLESLNPPAYKIAS 131 (347)
T ss_pred CeEEEecCCCHHHHHHHHhcCCCeEEecC
Confidence 44445555544455555555555555544
No 459
>PRK06815 hypothetical protein; Provisional
Probab=37.24 E-value=1.7e+02 Score=28.18 Aligned_cols=54 Identities=15% Similarity=-0.041 Sum_probs=35.0
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+.++. .++|+.+..++. ..+.+.-.-.|+++...-..-...++.+|++++.++-
T Consensus 69 ~~vv~--aSsGN~g~alA~-~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (317)
T PRK06815 69 QGVIT--ASSGNHGQGVAL-AAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGG 122 (317)
T ss_pred ceEEE--ECCChHHHHHHH-HHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 34655 677888877763 2223333356666665544556778899999998874
No 460
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases. Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).
Probab=36.95 E-value=99 Score=28.91 Aligned_cols=69 Identities=12% Similarity=0.016 Sum_probs=36.1
Q ss_pred CCCeeeeeeecCCCCCCCHHHHHHHHHcCC-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012628 198 RVPWSEYRYYDPKTVGLDFEGMIADIKAAP-GGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (459)
Q Consensus 198 G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~-~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~ 267 (459)
++++..+++..++..+.+.+.+.+++...- ....++- ++...++-.....+.+.+.++.+.++|++++.
T Consensus 74 ~a~i~~~~v~~~~~~~~~~~~i~~ai~~a~~~g~~VIN-~S~G~~~~~~~~~~~l~~a~~~a~~~gvlvv~ 143 (267)
T cd07476 74 LCRGLNIPIFAEDRRGCSQLDLARAINLALEQGAHIIN-ISGGRLTQTGEADPILANAVAMCQQNNVLIVA 143 (267)
T ss_pred CCeEEEEEEEeCCCCCCCHHHHHHHHHHHHHCCCCEEE-ecCCcCCCCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 345555565433334444555555544311 1333433 33332222222336678888888899999886
No 461
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=36.83 E-value=3.5e+02 Score=25.13 Aligned_cols=100 Identities=10% Similarity=-0.047 Sum_probs=56.2
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcC--CCCcchH--HHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISS--PTWGNHK--NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA 225 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~--p~y~~~~--~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~ 225 (459)
+++++ |.|.+..+... +....++.+|++.+ |...+.. ..+...|.++..++- ..+-..+.+
T Consensus 87 ~dvIL--T~s~S~~v~~~---l~~~~~~~~V~v~ESrP~~eG~~~a~~L~~~GI~vtli~D----------sa~~~~m~~ 151 (253)
T PRK06372 87 DSVIG--TISSSQVLKAF---ISSSEKIKSVYILESRPMLEGIDMAKLLVKSGIDVVLLTD----------ASMCEAVLN 151 (253)
T ss_pred CCEEE--EeCCcHHHHHH---HHhcCCCCEEEEecCCCchHHHHHHHHHHHCCCCEEEEeh----------hHHHHHHHh
Confidence 45777 88876666654 22233445777776 6554432 223356877766642 122223332
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEE
Q 012628 226 APGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFF 267 (459)
Q Consensus 226 ~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~ 267 (459)
-.++++=..--...|.++++-=-..++-.|+++++.+++
T Consensus 152 ---vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 152 ---VDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred ---CCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 444554222223445555555555688888999999887
No 462
>PTZ00081 enolase; Provisional
Probab=36.68 E-value=2e+02 Score=29.12 Aligned_cols=96 Identities=11% Similarity=-0.016 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEcCCCCc----chHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCC
Q 012628 163 SLRLAAALIERYFPGAKVLISSPTWG----NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCA 238 (459)
Q Consensus 163 a~~l~~~~~~~~~~gd~Vlv~~p~y~----~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p 238 (459)
+.+++......+.+-+-+++++|... .|..+.+..|-+ +|+--++.+.-+++.+...++.. ..-++.+ =
T Consensus 283 ~~eli~~~~~~l~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~---i~IvgDE~~~tn~~~l~~~I~~~--aad~i~i--K 355 (439)
T PTZ00081 283 GEELVELYLDLVKKYPIVSIEDPFDQDDWEAYAKLTAAIGQK---VQIVGDDLLVTNPTRIKKAIEKK--ACNALLL--K 355 (439)
T ss_pred HHHHHHHHHHHHhcCCcEEEEcCCCcccHHHHHHHHHhhCCC---ceEEcCCcccCCHHHHHHHHHhC--CCCEEEe--c
Confidence 33443323334554457899999854 445454455423 33322334456799999998872 2223332 2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~D 268 (459)
-|-.|.+ .+..+++++|+++|+.+++=
T Consensus 356 vnqiGGI---Te~l~~a~lA~~~Gi~~iis 382 (439)
T PTZ00081 356 VNQIGTV---TEAIEAAKLAQKNGWGVMVS 382 (439)
T ss_pred cccccCH---HHHHHHHHHHHHcCCcEEEe
Confidence 4566766 88999999999999887763
No 463
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=36.65 E-value=56 Score=34.19 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=29.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCCC
Q 012628 239 HNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (459)
Q Consensus 239 ~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~ 276 (459)
+..-|. .++++++++.|+++|+-||.|-+|...+.
T Consensus 153 ~~~~G~---~~e~k~lV~~aH~~Gi~VilD~V~NH~~~ 187 (542)
T TIGR02402 153 HNAYGG---PDDLKALVDAAHGLGLGVILDVVYNHFGP 187 (542)
T ss_pred ccccCC---HHHHHHHHHHHHHCCCEEEEEEccCCCCC
Confidence 444454 59999999999999999999999987653
No 464
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=36.39 E-value=3.9e+02 Score=25.49 Aligned_cols=102 Identities=16% Similarity=0.025 Sum_probs=60.6
Q ss_pred CceEEeecccchhHHHHHHHHHHHhC-CCCEEEEcCCCCcchHHHhhhCC--CCeeeeeeecCCCCCCCHHHHHHHHHcC
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYF-PGAKVLISSPTWGNHKNIFNDAR--VPWSEYRYYDPKTVGLDFEGMIADIKAA 226 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~-~gd~Vlv~~p~y~~~~~~~~~~G--~~v~~v~~~~~~~~~~d~e~l~~~i~~~ 226 (459)
..|.. .-|+|+-+-.- +++.+. -|..||+|--+-..+..-++..| ..+.+.+.+ .-|.|.+.++.+.
T Consensus 61 GiVaT--VFGAtGFlGry--vvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd-----~~DedSIr~vvk~- 130 (391)
T KOG2865|consen 61 GIVAT--VFGATGFLGRY--VVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFD-----LRDEDSIRAVVKH- 130 (391)
T ss_pred ceEEE--EecccccccHH--HHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccC-----CCCHHHHHHHHHh-
Confidence 34544 55777766554 444444 68999998644443333344443 366777663 2478889888875
Q ss_pred CCCcEEEE-eCCCCCCCCCC----CCHHHHHHHHHHHHhcCCe
Q 012628 227 PGGSFILL-HGCAHNPTGID----PTPEQWEKIADVIQEKNHI 264 (459)
Q Consensus 227 ~~~~~~ii-~~~p~NPTG~~----~s~~~l~~i~~l~~~~~~~ 264 (459)
. -++| +-.-..||+.. ....--++|+++|++-|+-
T Consensus 131 --s-NVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVe 170 (391)
T KOG2865|consen 131 --S-NVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVE 170 (391)
T ss_pred --C-cEEEEeeccccccCCcccccccchHHHHHHHHHHhhChh
Confidence 2 2333 33335566542 2223468899999998763
No 465
>PLN03013 cysteine synthase
Probab=36.36 E-value=2.4e+02 Score=28.50 Aligned_cols=52 Identities=8% Similarity=-0.048 Sum_probs=34.2
Q ss_pred eEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 152 VATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 152 i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
|+- .++|+.++.++. ..+.+.-.-.|++++-.-..-...++.+|++++.++-
T Consensus 178 VVe--aSSGN~G~ALA~-~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~ 229 (429)
T PLN03013 178 LVE--PTSGNTGIGLAF-IAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (429)
T ss_pred EEE--ECCcHHHHHHHH-HHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 544 678888888873 2222332245666665555667888999999998853
No 466
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=36.18 E-value=2.2e+02 Score=22.66 Aligned_cols=79 Identities=10% Similarity=0.044 Sum_probs=44.7
Q ss_pred CCEEEEcCCCCcchHHHhhh-CCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHH
Q 012628 177 GAKVLISSPTWGNHKNIFND-ARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIA 255 (459)
Q Consensus 177 gd~Vlv~~p~y~~~~~~~~~-~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~ 255 (459)
|=+++.+.- ....++. .|..+..++.. ..++ + ..+.+.+.. ...-++++.|+ |-|......+-..|.
T Consensus 27 Gf~i~AT~g----Ta~~L~~~~Gi~v~~vk~~-~~~g--~-~~i~~~i~~---g~i~~VInt~~-~~~~~~~~~dg~~iR 94 (115)
T cd01422 27 RHRLVATGT----TGLLIQEATGLTVNRMKSG-PLGG--D-QQIGALIAE---GEIDAVIFFRD-PLTAQPHEPDVKALL 94 (115)
T ss_pred CCEEEEech----HHHHHHHhhCCcEEEEecC-CCCc--h-hHHHHHHHc---CceeEEEEcCC-CCCCCcccccHHHHH
Confidence 555554442 2334454 78888777441 1122 2 456677776 34444444442 224332235677899
Q ss_pred HHHHhcCCeeEE
Q 012628 256 DVIQEKNHIPFF 267 (459)
Q Consensus 256 ~l~~~~~~~ii~ 267 (459)
+.|-+++++++.
T Consensus 95 r~a~~~~Ip~~T 106 (115)
T cd01422 95 RLCDVYNIPLAT 106 (115)
T ss_pred HHHHHcCCCEEE
Confidence 999999998875
No 467
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=35.83 E-value=1.8e+02 Score=28.39 Aligned_cols=71 Identities=13% Similarity=0.158 Sum_probs=45.1
Q ss_pred CCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCe
Q 012628 185 PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHI 264 (459)
Q Consensus 185 p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ 264 (459)
|.|..+..++....+.++.+|..... ....+...++++. +.-+++ .=|-. .++.++++++|+++|+.
T Consensus 51 ~~y~~~eell~d~Di~~V~ipt~~P~--~~H~e~a~~aL~a---GkHVL~----EKPla----~~Ea~el~~~A~~~g~~ 117 (343)
T TIGR01761 51 PLYCEVEELPDDIDIACVVVRSAIVG--GQGSALARALLAR---GIHVLQ----EHPLH----PRDIQDLLRLAERQGRR 117 (343)
T ss_pred CccCCHHHHhcCCCEEEEEeCCCCCC--ccHHHHHHHHHhC---CCeEEE----cCCCC----HHHHHHHHHHHHHcCCE
Confidence 46777888776666666666542111 2345666666764 444444 33432 38899999999999998
Q ss_pred eEEe
Q 012628 265 PFFD 268 (459)
Q Consensus 265 ii~D 268 (459)
+.+.
T Consensus 118 l~v~ 121 (343)
T TIGR01761 118 YLVN 121 (343)
T ss_pred EEEE
Confidence 8873
No 468
>PLN00191 enolase
Probab=35.74 E-value=2.6e+02 Score=28.53 Aligned_cols=99 Identities=11% Similarity=0.008 Sum_probs=58.5
Q ss_pred cchhHHHHHHHHHHHhCCCCEEEEcCCCCcc-hHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCC
Q 012628 159 SGTGSLRLAAALIERYFPGAKVLISSPTWGN-HKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGC 237 (459)
Q Consensus 159 ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~-~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~ 237 (459)
...+.+.+...+ ..+-+-+.+++|.... +....+.... ..+|+--++.+..+++.++..++.. ..-++.+
T Consensus 296 s~~e~i~~~~~L---~~~y~I~~IEDPl~~~D~eg~~~Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~--aad~i~i-- 366 (457)
T PLN00191 296 SGDELIDLYKEF---VSDYPIVSIEDPFDQDDWEHWAKLTSL--EDVQIVGDDLLVTNPKRVAKAIQEK--ACNALLL-- 366 (457)
T ss_pred CHHHHHHHHHHH---hhcCCcEEEECCCCcccHHHHHHHHcc--CCCcEEccCcccCCHHHHHHHHHhC--CCCEEEe--
Confidence 445555554322 3334578999998543 2222222111 3344433444456799999998862 2223322
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCeeEEec
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDV 269 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~De 269 (459)
=.|-.|.+ .+..+++++|+++|+.+++-.
T Consensus 367 Kl~qiGGI---Tea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 367 KVNQIGTV---TESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred cccccCCH---HHHHHHHHHHHHCCCEEEeCC
Confidence 34566777 788899999999999987643
No 469
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=35.49 E-value=32 Score=32.46 Aligned_cols=29 Identities=14% Similarity=0.245 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhcCCeeEEeccCCCCCC
Q 012628 248 PEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (459)
Q Consensus 248 ~~~l~~i~~l~~~~~~~ii~Deay~~~~~ 276 (459)
.++++++++.|+++|+-||.|-++...+.
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~~ 79 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTSD 79 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEET
T ss_pred hhhhhhhhhccccccceEEEeeecccccc
Confidence 49999999999999999999999876664
No 470
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=35.41 E-value=4e+02 Score=25.38 Aligned_cols=103 Identities=18% Similarity=0.114 Sum_probs=52.6
Q ss_pred cccCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCC---cchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHH
Q 012628 147 LKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTW---GNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (459)
Q Consensus 147 ~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y---~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i 223 (459)
+.-+-+++ |.||.|-=..+ .+.....|.++++-+-.- ....+.++..| ++..+-.+-. ..=++..+.+.+
T Consensus 36 v~g~~vLI--TGgg~GlGr~i--alefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis--~~eei~~~a~~V 108 (300)
T KOG1201|consen 36 VSGEIVLI--TGGGSGLGRLI--ALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS--DREEIYRLAKKV 108 (300)
T ss_pred ccCCEEEE--eCCCchHHHHH--HHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC--CHHHHHHHHHHH
Confidence 33455666 66666655554 333445677776655332 23344444445 6666655311 122455555555
Q ss_pred HcCCCCcEEEEeCCC---CCCCCCCCCHHHHHHHHHH
Q 012628 224 KAAPGGSFILLHGCA---HNPTGIDPTPEQWEKIADV 257 (459)
Q Consensus 224 ~~~~~~~~~ii~~~p---~NPTG~~~s~~~l~~i~~l 257 (459)
++.- +..=+++||. ++-...-.+.+++++..++
T Consensus 109 k~e~-G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 109 KKEV-GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred HHhc-CCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 5532 2333444554 2223444677888887765
No 471
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=35.29 E-value=4.8e+02 Score=26.28 Aligned_cols=52 Identities=13% Similarity=0.054 Sum_probs=27.1
Q ss_pred CHHHHHHHHHcCCC--CcEEEEeCCC-CCCCCCCCCHHHHHHHHHHHH---hcCCeeEEecc
Q 012628 215 DFEGMIADIKAAPG--GSFILLHGCA-HNPTGIDPTPEQWEKIADVIQ---EKNHIPFFDVA 270 (459)
Q Consensus 215 d~e~l~~~i~~~~~--~~~~ii~~~p-~NPTG~~~s~~~l~~i~~l~~---~~~~~ii~Dea 270 (459)
+.+.+.+++..... +.-++++.++ .|+ -+.+.++++.++.+ .+.++++.|..
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~----kd~~lm~EL~~~lk~~~PdevlLVLsAT 361 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNY----RASETVEEMIETMGQVEPDYICLTLSAS 361 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccC----cCHHHHHHHHHHHhhcCCCeEEEEECCc
Confidence 55667666644211 1234444443 444 22344666666554 35677777775
No 472
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=34.86 E-value=1.4e+02 Score=28.18 Aligned_cols=53 Identities=8% Similarity=-0.012 Sum_probs=34.1
Q ss_pred ceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 151 RVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 151 ~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
.|+. .++|+.+..++. ..+.+.-.-.|+++.-.-..-...++.+|++++.++-
T Consensus 55 ~vv~--~SsGN~g~alA~-~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~ 107 (291)
T cd01561 55 TIIE--PTSGNTGIGLAM-VAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPE 107 (291)
T ss_pred EEEE--eCCChHHHHHHH-HHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 3555 778888887763 2223332245666654445566778899999998874
No 473
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=34.72 E-value=1.7e+02 Score=24.45 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=26.7
Q ss_pred HHHHHHHhhccCCCCCcccccCCcceeeecCCCHHHHHHHHhcccEEEcCCC
Q 012628 381 QKLFDSLSAKDKSGKDWSFILRQIGMFSFTGLNKAQSDNMTNKWHVYMTKDG 432 (459)
Q Consensus 381 ~~l~~~L~~~~g~~~~~~~~~~~~g~f~~~~l~~~~~~~ll~~~gI~v~~gg 432 (459)
..++.+|+ .+| .+..|... ...+++..|.++.|..|.++|
T Consensus 27 akIfaGLR-~~G-----ny~Lp~~a------D~NeVLkALc~eAGw~Ve~DG 66 (150)
T PF05687_consen 27 AKIFAGLR-AHG-----NYKLPKHA------DNNEVLKALCREAGWTVEPDG 66 (150)
T ss_pred HHHHHHHH-Hhc-----CCCCCCcC------CHHHHHHHHHHhCCEEEccCC
Confidence 56777888 775 22222211 135678899999999999987
No 474
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=34.71 E-value=2.6e+02 Score=27.08 Aligned_cols=42 Identities=10% Similarity=0.049 Sum_probs=22.4
Q ss_pred CCCHH-HHHHHHhcccEEEcCCCcEEEccCChhhHHHHHHHHHHHH
Q 012628 411 GLNKA-QSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSY 455 (459)
Q Consensus 411 ~l~~~-~~~~ll~~~gI~v~~ggRis~~~~~~e~i~~~~~~l~~~~ 455 (459)
|++.. .+-.+..++||.-.+|+..++.. +.+-+..+...+.+
T Consensus 263 Gi~~~~~~~~~a~~~g~i~k~g~w~~~~~---~~~~qg~~~~~~~l 305 (321)
T TIGR02012 263 GISKLGEIIDLAVELDIIKKAGSWYSYGD---EKLGQGRENAKAYL 305 (321)
T ss_pred ccchhhHHHHHHHhCCcEEcccCEEEECC---cEecccHHHHHHHH
Confidence 45542 23344444699888888777643 33444444444333
No 475
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=34.59 E-value=3.6e+02 Score=24.54 Aligned_cols=96 Identities=11% Similarity=0.007 Sum_probs=59.1
Q ss_pred cccchhHHHHHHHHHHHhCCCCEEEE----cCC--CCc-------chHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHH
Q 012628 157 GLSGTGSLRLAAALIERYFPGAKVLI----SSP--TWG-------NHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADI 223 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~~~~gd~Vlv----~~p--~y~-------~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i 223 (459)
.+||..+...+.++... -+.+.+ +.. .|. -....++..|..++.++... ...--.+++.+++
T Consensus 7 ~SGGKDS~~al~~a~~~---~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~--~~e~~~e~l~~~l 81 (223)
T TIGR00290 7 ISGGKDSCLALYHALKE---HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEG--TEEDEVEELKGIL 81 (223)
T ss_pred ecCcHHHHHHHHHHHHh---CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCC--CccHHHHHHHHHH
Confidence 79999998887554433 222211 111 121 11234557788877766521 1222466777777
Q ss_pred HcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 224 KAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 224 ~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
++. +...++ +|.+.+..++..+-++|.+-|+..+
T Consensus 82 ~~~--gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 82 HTL--DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHc--CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 663 233344 6999999999999999999888665
No 476
>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional
Probab=34.40 E-value=1e+02 Score=29.78 Aligned_cols=15 Identities=7% Similarity=-0.139 Sum_probs=11.2
Q ss_pred HHhhhCCCCeeeeee
Q 012628 192 NIFNDARVPWSEYRY 206 (459)
Q Consensus 192 ~~~~~~G~~v~~v~~ 206 (459)
...+.+|++++.++.
T Consensus 113 ~l~~~~Ga~v~~~~~ 127 (329)
T PRK14045 113 LLDKIMGIETRVYEA 127 (329)
T ss_pred HHHHHCCCEEEEECC
Confidence 456789999887764
No 477
>PF04019 DUF359: Protein of unknown function (DUF359); InterPro: IPR007164 This is family of archaebacterial proteins, which are about 170 amino acids in length. They have no known function. The most conserved portion of the protein contains the sequence GEEDL that may be important for its function.
Probab=34.28 E-value=2.5e+02 Score=22.74 Aligned_cols=32 Identities=31% Similarity=0.387 Sum_probs=22.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHH-hcCCeeEEecc
Q 012628 238 AHNPTGIDPTPEQWEKIADVIQ-EKNHIPFFDVA 270 (459)
Q Consensus 238 p~NPTG~~~s~~~l~~i~~l~~-~~~~~ii~Dea 270 (459)
..||-|++ |.+-++.|.+... ...+.|++|.=
T Consensus 39 v~NPpG~I-t~el~~ai~~a~~~~~~~~I~V~GE 71 (121)
T PF04019_consen 39 VKNPPGTI-TEELIEAIKKALESGKPVVIFVDGE 71 (121)
T ss_pred EECCCCcc-cHHHHHHHHHHHhCCCCEEEEEeCh
Confidence 37999987 5666777777763 45778888753
No 478
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=34.24 E-value=3.6e+02 Score=24.51 Aligned_cols=94 Identities=12% Similarity=0.016 Sum_probs=55.1
Q ss_pred cCceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCC
Q 012628 149 EQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPG 228 (459)
Q Consensus 149 ~~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~ 228 (459)
..+|++ ..||.-|..-+. .++..|..|.|.+|.+..-...+...| ++..+.- . ++.+.+ .
T Consensus 25 ~~~VLV--VGGG~VA~RK~~---~Ll~~gA~VtVVap~i~~el~~l~~~~-~i~~~~r----~--~~~~dl----~---- 84 (223)
T PRK05562 25 KIKVLI--IGGGKAAFIKGK---TFLKKGCYVYILSKKFSKEFLDLKKYG-NLKLIKG----N--YDKEFI----K---- 84 (223)
T ss_pred CCEEEE--ECCCHHHHHHHH---HHHhCCCEEEEEcCCCCHHHHHHHhCC-CEEEEeC----C--CChHHh----C----
Confidence 346888 888888877663 335567888888888754433222222 2333321 1 233333 2
Q ss_pred CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeE-Eecc
Q 012628 229 GSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPF-FDVA 270 (459)
Q Consensus 229 ~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii-~Dea 270 (459)
...+++.+ .++| +-=++|.+.|+++++++. +|+.
T Consensus 85 g~~LViaA-TdD~-------~vN~~I~~~a~~~~~lvn~vd~p 119 (223)
T PRK05562 85 DKHLIVIA-TDDE-------KLNNKIRKHCDRLYKLYIDCSDY 119 (223)
T ss_pred CCcEEEEC-CCCH-------HHHHHHHHHHHHcCCeEEEcCCc
Confidence 34455543 3343 777889999999876554 5653
No 479
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=34.05 E-value=80 Score=28.44 Aligned_cols=50 Identities=14% Similarity=-0.031 Sum_probs=34.3
Q ss_pred HHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 216 FEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 216 ~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
++.++++++. ...++-+=.-+..+-.. .+..+++.++|++|++.+|+++-
T Consensus 24 ~~~ve~al~~---Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALKG---GVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHhC---CCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCc
Confidence 7888888886 54444443333332221 46678999999999999998875
No 480
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=33.73 E-value=2.3e+02 Score=24.15 Aligned_cols=86 Identities=14% Similarity=0.127 Sum_probs=45.0
Q ss_pred ccchhHHHHHHHHHH-HhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeC
Q 012628 158 LSGTGSLRLAAALIE-RYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHG 236 (459)
Q Consensus 158 ~ggt~a~~l~~~~~~-~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~ 236 (459)
.|+|+.+-.. ++. ++..|-+|.+..-.-..... ..++ ..+..+ -.|++.+.+++.. -..++. +
T Consensus 4 ~GatG~vG~~--l~~~L~~~~~~V~~~~R~~~~~~~---~~~~--~~~~~d-----~~d~~~~~~al~~---~d~vi~-~ 67 (183)
T PF13460_consen 4 FGATGFVGRA--LAKQLLRRGHEVTALVRSPSKAED---SPGV--EIIQGD-----LFDPDSVKAALKG---ADAVIH-A 67 (183)
T ss_dssp ETTTSHHHHH--HHHHHHHTTSEEEEEESSGGGHHH---CTTE--EEEESC-----TTCHHHHHHHHTT---SSEEEE-C
T ss_pred ECCCChHHHH--HHHHHHHCCCEEEEEecCchhccc---cccc--ccceee-----ehhhhhhhhhhhh---cchhhh-h
Confidence 5666655543 222 24466666665544222322 3333 344331 2578899998885 344443 3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 012628 237 CAHNPTGIDPTPEQWEKIADVIQEKNH 263 (459)
Q Consensus 237 ~p~NPTG~~~s~~~l~~i~~l~~~~~~ 263 (459)
.+.++. ..+..+.+++.|++.++
T Consensus 68 ~~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 68 AGPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp CHSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhhcc----ccccccccccccccccc
Confidence 333222 25667777777776543
No 481
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=33.55 E-value=1.4e+02 Score=24.68 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=40.1
Q ss_pred CCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHh-c-CCee-EEeccCCCC
Q 012628 211 TVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPT-PEQWEKIADVIQE-K-NHIP-FFDVAYQGF 274 (459)
Q Consensus 211 ~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s-~~~l~~i~~l~~~-~-~~~i-i~Deay~~~ 274 (459)
+...+++.+.+.+++. ....+++..|-|..|..-. .+..++.++..++ . ++.| ++||-|...
T Consensus 35 ~~~~~~~~l~~li~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT~ 100 (135)
T PF03652_consen 35 NREKDIEELKKLIEEY--QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTTK 100 (135)
T ss_dssp CCCCCHHHHHHHHHHC--CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSHH
T ss_pred CCchHHHHHHHHHHHh--CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhHH
Confidence 3467899999999884 4456666778888776532 2335555555444 3 7655 489987644
No 482
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=33.53 E-value=3.3e+02 Score=24.17 Aligned_cols=43 Identities=21% Similarity=0.200 Sum_probs=25.0
Q ss_pred CHHHHHHHHHcCCCCc-EEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 012628 215 DFEGMIADIKAAPGGS-FILLHGCAHNPTGIDPTPEQWEKIADVIQ 259 (459)
Q Consensus 215 d~e~l~~~i~~~~~~~-~~ii~~~p~NPTG~~~s~~~l~~i~~l~~ 259 (459)
|++...+..+..+.+. -+++-.-.+|+||.-+.. =..+.++|.
T Consensus 121 dp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~D--h~~~i~LC~ 164 (232)
T KOG4589|consen 121 DPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRD--HYRSIELCD 164 (232)
T ss_pred CHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhh--HHHHHHHHH
Confidence 4554444444333343 345545578999988643 346777775
No 483
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=33.40 E-value=2.4e+02 Score=22.25 Aligned_cols=57 Identities=9% Similarity=0.033 Sum_probs=31.1
Q ss_pred HHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 012628 192 NIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEK 261 (459)
Q Consensus 192 ~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~ 261 (459)
..++..|.+++.+.. .+..+++.+.+.+.. ..++.++.- +. ...+..+++++.+++.
T Consensus 21 ~~l~~~G~~V~~lg~------~~~~~~l~~~~~~~~--pdvV~iS~~-~~----~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 21 RALRDAGFEVIDLGV------DVPPEEIVEAAKEED--ADAIGLSGL-LT----THMTLMKEVIEELKEA 77 (119)
T ss_pred HHHHHCCCEEEECCC------CCCHHHHHHHHHHcC--CCEEEEecc-cc----ccHHHHHHHHHHHHHc
Confidence 455667777755432 256677777776632 233333222 11 1226677777777765
No 484
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=33.11 E-value=1.5e+02 Score=24.45 Aligned_cols=60 Identities=10% Similarity=-0.004 Sum_probs=39.4
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNH 263 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~ 263 (459)
...++..|++|+.+..+ ..+|.+.++..+. +..++.+++-. |... ..++++.+.+++.|+
T Consensus 22 ~~~l~~~GfeVi~LG~~------v~~e~~v~aa~~~--~adiVglS~l~--~~~~---~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 22 DHAFTNAGFNVVNLGVL------SPQEEFIKAAIET--KADAILVSSLY--GHGE---IDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHHCCCEEEECCCC------CCHHHHHHHHHHc--CCCEEEEeccc--ccCH---HHHHHHHHHHHHCCC
Confidence 44677889999887652 4678887777663 34455544433 2222 678889988888764
No 485
>PLN02460 indole-3-glycerol-phosphate synthase
Probab=32.88 E-value=55 Score=31.71 Aligned_cols=79 Identities=8% Similarity=-0.011 Sum_probs=50.3
Q ss_pred EEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 012628 179 KVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVI 258 (459)
Q Consensus 179 ~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~ 258 (459)
-|+.....|.+....++......+.+|+. -++|-+|+-++.++-.- +-..+++|. .+++.++++++.++|
T Consensus 157 SVLTd~~~F~Gs~e~L~~vr~~~v~lPvL-rKDFIID~yQI~eAr~~-GADAVLLIa--------aiL~~~~L~~l~~~A 226 (338)
T PLN02460 157 SVLTDEKYFQGSFENLEAIRNAGVKCPLL-CKEFIVDAWQIYYARSK-GADAILLIA--------AVLPDLDIKYMLKIC 226 (338)
T ss_pred EEecCcCcCCCCHHHHHHHHHcCCCCCEe-eccccCCHHHHHHHHHc-CCCcHHHHH--------HhCCHHHHHHHHHHH
Confidence 35555455555444444322111456765 56899999998877543 223333332 456778999999999
Q ss_pred HhcCCeeEE
Q 012628 259 QEKNHIPFF 267 (459)
Q Consensus 259 ~~~~~~ii~ 267 (459)
++.|+-.++
T Consensus 227 ~~LGme~LV 235 (338)
T PLN02460 227 KSLGMAALI 235 (338)
T ss_pred HHcCCeEEE
Confidence 999988776
No 486
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=32.75 E-value=2.8e+02 Score=25.19 Aligned_cols=25 Identities=32% Similarity=0.258 Sum_probs=14.7
Q ss_pred cccchhHHHHHHHHHH-HhCCCCEEEEc
Q 012628 157 GLSGTGSLRLAAALIE-RYFPGAKVLIS 183 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~-~~~~gd~Vlv~ 183 (459)
..|+++++-.. +.. ....|.+|++.
T Consensus 12 ItGas~gIG~~--~a~~l~~~G~~v~~~ 37 (255)
T PRK06463 12 ITGGTRGIGRA--IAEAFLREGAKVAVL 37 (255)
T ss_pred EeCCCChHHHH--HHHHHHHCCCEEEEE
Confidence 46667777665 222 24477777664
No 487
>PRK10785 maltodextrin glucosidase; Provisional
Probab=32.69 E-value=1.6e+02 Score=31.26 Aligned_cols=64 Identities=13% Similarity=0.163 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHcC--CCCcEEEEeCCCCCCCCCC-------------CCHHHHHHHHHHHHhcCCeeEEeccCCCCCC
Q 012628 213 GLDFEGMIADIKAA--PGGSFILLHGCAHNPTGID-------------PTPEQWEKIADVIQEKNHIPFFDVAYQGFAS 276 (459)
Q Consensus 213 ~~d~e~l~~~i~~~--~~~~~~ii~~~p~NPTG~~-------------~s~~~l~~i~~l~~~~~~~ii~Deay~~~~~ 276 (459)
+=|++.+.+.+... -.-+.+.+.+-..+|+..- -+.++++++++-|+++|+-||.|-++...+.
T Consensus 175 GGDl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~~ 253 (598)
T PRK10785 175 GGDLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNHTGD 253 (598)
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCcCCC
Confidence 34666666665431 1234455544334443211 2348999999999999999999999876653
No 488
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=32.61 E-value=3.6e+02 Score=24.03 Aligned_cols=92 Identities=13% Similarity=0.104 Sum_probs=42.3
Q ss_pred cccchhHHHHHHHHHHH-hCCCCEEEEcCCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc---CCCCcEE
Q 012628 157 GLSGTGSLRLAAALIER-YFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA---APGGSFI 232 (459)
Q Consensus 157 t~ggt~a~~l~~~~~~~-~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~---~~~~~~~ 232 (459)
..|+++.+-.. +... ...|..|.+...............+.++..++.+ --|.+.+++.+++ .-.+..+
T Consensus 11 ItGa~g~iG~~--la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 11 VTGASGGIGEE--IARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPAN-----LSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred EECCCChHHHH--HHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCE
Confidence 47777776664 2222 4477777766544333333333345455555442 1244555544432 1123345
Q ss_pred EEeCCCCCCCC--CCCCHHHHHHHH
Q 012628 233 LLHGCAHNPTG--IDPTPEQWEKIA 255 (459)
Q Consensus 233 ii~~~p~NPTG--~~~s~~~l~~i~ 255 (459)
++.+....+.+ ...+.+++++..
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~ 108 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVL 108 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHH
Confidence 66444333222 123445555443
No 489
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=32.54 E-value=49 Score=37.67 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=29.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEeccCCCCC
Q 012628 237 CAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFA 275 (459)
Q Consensus 237 ~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Deay~~~~ 275 (459)
+|++|.+.+ ++++++++-|+++|+-||.|-+|....
T Consensus 546 dp~dp~~ri---~EfK~LV~alH~~GI~VILDVVyNHt~ 581 (1111)
T TIGR02102 546 DPKDPELRI---AEFKNLINEIHKRGMGVILDVVYNHTA 581 (1111)
T ss_pred CCcCccccH---HHHHHHHHHHHHCCCEEEEeccccccc
Confidence 345555544 899999999999999999999997654
No 490
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=32.33 E-value=3.2e+02 Score=25.77 Aligned_cols=143 Identities=15% Similarity=0.083 Sum_probs=65.1
Q ss_pred cHHHHHHHHHHhhc-CCC-----CCCCCCcccHHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCC
Q 012628 103 LDVVKKAENLMLER-GEN-----KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP 176 (459)
Q Consensus 103 ~~~v~~a~~~~~~~-~~~-----~~Y~~~~g~~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~ 176 (459)
...+.+.+.+.+.+ +.. ..|....|..+....+++.+.... ++ +++ +.|+..+..+. .....
T Consensus 13 ~~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~~~-----~D-lIi--~~gt~aa~~~~----~~~~~ 80 (294)
T PF04392_consen 13 LDDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKAQK-----PD-LII--AIGTPAAQALA----KHLKD 80 (294)
T ss_dssp HHHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCCTS------S-EEE--EESHHHHHHHH----HH-SS
T ss_pred HHHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhcCC-----CC-EEE--EeCcHHHHHHH----HhcCC
Confidence 34556666666643 111 123344566665666666654432 44 666 56665554443 22222
Q ss_pred CCEEEEc---CCCCcchHHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHc-CCCCcEEEEeCCCCCCCCCCCCHHHHH
Q 012628 177 GAKVLIS---SPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKA-APGGSFILLHGCAHNPTGIDPTPEQWE 252 (459)
Q Consensus 177 gd~Vlv~---~p~y~~~~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~-~~~~~~~ii~~~p~NPTG~~~s~~~l~ 252 (459)
.--|+.. +|...+.......-|..+..+-. ..+++.-.+.+++ .|...++.++-+++.++ +....+
T Consensus 81 ~iPVVf~~V~dp~~~~l~~~~~~~~~nvTGv~~------~~~~~~~l~l~~~l~P~~k~igvl~~~~~~~----~~~~~~ 150 (294)
T PF04392_consen 81 DIPVVFCGVSDPVGAGLVDSLDRPGKNVTGVSE------RPPIEKQLELIKKLFPDAKRIGVLYDPSEPN----SVAQIE 150 (294)
T ss_dssp -S-EEEECES-TTTTTS-S-SSS--SSEEEEEE---------HHHHHHHHHHHSTT--EEEEEEETT-HH----HHHHHH
T ss_pred CcEEEEEeccChhhhhccccccCCCCCEEEEEC------CcCHHHHHHHHHHhCCCCCEEEEEecCCCcc----HHHHHH
Confidence 1233332 24433443333444456666642 1355555555555 23345554544555442 246778
Q ss_pred HHHHHHHhcCCeeEE
Q 012628 253 KIADVIQEKNHIPFF 267 (459)
Q Consensus 253 ~i~~l~~~~~~~ii~ 267 (459)
.+.+.++++|+-++.
T Consensus 151 ~~~~~a~~~g~~l~~ 165 (294)
T PF04392_consen 151 QLRKAAKKLGIELVE 165 (294)
T ss_dssp HHHHHHHHTT-EEEE
T ss_pred HHHHHHHHcCCEEEE
Confidence 888888999987653
No 491
>PRK09354 recA recombinase A; Provisional
Probab=32.27 E-value=3.4e+02 Score=26.63 Aligned_cols=58 Identities=14% Similarity=0.106 Sum_probs=29.7
Q ss_pred cCceEEeecccchhHHHHHHHHHHHh-CCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 149 EQRVATVQGLSGTGSLRLAAALIERY-FPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 149 ~~~i~~~~t~ggt~a~~l~~~~~~~~-~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
...|..+....|++=..++..++... ..|..++..+.-.......++..|..+..+-+
T Consensus 59 ~G~IteI~G~~GsGKTtLal~~~~~~~~~G~~~~yId~E~s~~~~~a~~lGvdld~lli 117 (349)
T PRK09354 59 RGRIVEIYGPESSGKTTLALHAIAEAQKAGGTAAFIDAEHALDPVYAKKLGVDIDNLLV 117 (349)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHcCCCHHHeEE
Confidence 34454433455555555554443332 35555555555444445666777776544433
No 492
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=32.23 E-value=3.2e+02 Score=27.64 Aligned_cols=54 Identities=7% Similarity=0.022 Sum_probs=34.1
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+.|+. .++|+.+..++. ..+.+.---.|+++...-..-...++.+|++++.++.
T Consensus 63 ~~vv~--~ssGN~g~alA~-~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 63 DTIIE--PTSGNTGIGLAL-VAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CEEEE--eCCcHHHHHHHH-HHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 34555 788888888873 2222322245666554444456678899999998874
No 493
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=32.23 E-value=5.3e+02 Score=25.87 Aligned_cols=74 Identities=14% Similarity=0.088 Sum_probs=40.5
Q ss_pred CCCEEEEcCCCCcchH-----H----HhhhCCCCeee-eeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCC
Q 012628 176 PGAKVLISSPTWGNHK-----N----IFNDARVPWSE-YRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGID 245 (459)
Q Consensus 176 ~gd~Vlv~~p~y~~~~-----~----~~~~~G~~v~~-v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~ 245 (459)
+||.|+...+.++++. . .+...|+++.. +.+ .+--+-++|...++...|+..+-+ | |-.
T Consensus 318 ~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~----SgHa~~~dl~~~i~~~~Pk~~ipv----H---ge~ 386 (422)
T TIGR00649 318 KGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHV----SGHASQEDHKLLLRLLKPKYIIPV----H---GEY 386 (422)
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEe----cCCCCHHHHHHHHHHhCCCEEEec----C---CcH
Confidence 6789999988777665 1 23346776543 222 222345555555554322322222 2 222
Q ss_pred CCHHHHHHHHHHHHhcCC
Q 012628 246 PTPEQWEKIADVIQEKNH 263 (459)
Q Consensus 246 ~s~~~l~~i~~l~~~~~~ 263 (459)
..+...++++++.|+
T Consensus 387 ---~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 387 ---RMLINHTKLAEEEGY 401 (422)
T ss_pred ---HHHHHHHHHHHHcCC
Confidence 567777788876654
No 494
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=32.03 E-value=5.4e+02 Score=25.85 Aligned_cols=121 Identities=12% Similarity=0.111 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHhcCCCCcccc-CceEEeecccchhHHHHHHHHHHHh---CCCCEEEEcCCCCcchHHHhhhCC--CCee
Q 012628 129 AAFNKVTAELLFGADNSVLKE-QRVATVQGLSGTGSLRLAAALIERY---FPGAKVLISSPTWGNHKNIFNDAR--VPWS 202 (459)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~-~~i~~~~t~ggt~a~~l~~~~~~~~---~~gd~Vlv~~p~y~~~~~~~~~~G--~~v~ 202 (459)
++.++.+.+.+.-. ...+.+ ...+.++..+--|.+.+.- ++..+ .|+-.++++.-|-.+.....+.+| +.+.
T Consensus 28 ~~y~~r~~eRfg~~-~~~~~~~~p~vWiHaaSVGEv~a~~p-Lv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~ 105 (419)
T COG1519 28 PKYRKRLGERFGFY-KPPVKPEGPLVWIHAASVGEVLAALP-LVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQ 105 (419)
T ss_pred hHHHHHHHHHhccc-CCCCCCCCCeEEEEecchhHHHHHHH-HHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEE
Confidence 45667777665412 222223 3455544444444444432 23223 377788888877668888878777 5777
Q ss_pred eeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 203 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
++|++ ..+-...+.+.++ ++. +|++-+ |-|--++.-|+++|+.++.=++
T Consensus 106 YlP~D----~~~~v~rFl~~~~---P~l-~Ii~Et-----------ElWPnli~e~~~~~~p~~LvNa 154 (419)
T COG1519 106 YLPLD----LPIAVRRFLRKWR---PKL-LIIMET-----------ELWPNLINELKRRGIPLVLVNA 154 (419)
T ss_pred ecCcC----chHHHHHHHHhcC---CCE-EEEEec-----------cccHHHHHHHHHcCCCEEEEee
Confidence 88873 1233444444443 233 333222 5566788888888988876665
No 495
>PRK07048 serine/threonine dehydratase; Validated
Probab=31.61 E-value=2.2e+02 Score=27.42 Aligned_cols=54 Identities=13% Similarity=-0.034 Sum_probs=34.6
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+.|+. .++|+.+..++.. .+.+.-.-.|+++...-..-...++.+|++++.++-
T Consensus 73 ~~vv~--aSsGN~g~alA~~-a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~ 126 (321)
T PRK07048 73 AGVVT--FSSGNHAQAIALS-ARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDR 126 (321)
T ss_pred CcEEE--eCCCHHHHHHHHH-HHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 34655 6778888877732 223332246666665544556677899999998874
No 496
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=31.47 E-value=2.6e+02 Score=26.16 Aligned_cols=120 Identities=11% Similarity=-0.012 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHhcCCCCccccCceEEeecccchhHHHHHHHHHHHhCCC--CEEEEcC--CCCcc--hHHHhhhCCCCee
Q 012628 129 AAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPG--AKVLISS--PTWGN--HKNIFNDARVPWS 202 (459)
Q Consensus 129 ~~lr~aia~~l~~~~~~~~~~~~i~~~~t~ggt~a~~l~~~~~~~~~~g--d~Vlv~~--p~y~~--~~~~~~~~G~~v~ 202 (459)
...++.|+++.... +....+++ |.|-+..+..+ +......| =+|+|.+ |.+.+ ....+...|.++.
T Consensus 91 ~~~~~~I~~~~~~~----I~~~~~IL--T~~~S~~v~~~--l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~ 162 (282)
T PF01008_consen 91 EQAREKIADHASEL----INDGDTIL--THGYSSTVERF--LLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVT 162 (282)
T ss_dssp HHHHHHHHHHHHCC----C-TTEEEE--EES--SHHHHH--HHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEE
T ss_pred HHHHHHHHHHHHHh----ccCCeEEE--EeCCchHHHHH--HHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEE
Confidence 45566777665433 23566777 88888887766 33333434 3566665 55444 2334446788877
Q ss_pred eeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEe
Q 012628 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFD 268 (459)
Q Consensus 203 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~D 268 (459)
.++- ..+-..+.. +-.++++=...=-+.|.++++-=-..++-.|+++++.+++=
T Consensus 163 ~i~d----------~~~~~~m~~--~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 163 LIPD----------SAVGYVMPR--DVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp EE-G----------GGHHHHHHC--TESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred EEec----------hHHHHHHHH--hCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 7753 233333432 13344442222223333333333335777889999888764
No 497
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed
Probab=31.41 E-value=1.3e+02 Score=28.05 Aligned_cols=58 Identities=17% Similarity=0.052 Sum_probs=39.5
Q ss_pred eeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCCeeEEecc
Q 012628 203 EYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVA 270 (459)
Q Consensus 203 ~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NPTG~~~s~~~l~~i~~l~~~~~~~ii~Dea 270 (459)
.+|+- -.+|-+|+.++.++... + ...+.++. ..++.++++++++.|+++|.-+++|-.
T Consensus 111 ~iPvl-~kdfi~~~~qi~~a~~~-G-AD~VlLi~-------~~l~~~~l~~li~~a~~lGl~~lvevh 168 (260)
T PRK00278 111 SLPVL-RKDFIIDPYQIYEARAA-G-ADAILLIV-------AALDDEQLKELLDYAHSLGLDVLVEVH 168 (260)
T ss_pred CCCEE-eeeecCCHHHHHHHHHc-C-CCEEEEEe-------ccCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 45543 25688888888777765 1 33344432 223458999999999999999998854
No 498
>PRK08329 threonine synthase; Validated
Probab=31.39 E-value=2e+02 Score=28.05 Aligned_cols=54 Identities=15% Similarity=0.013 Sum_probs=34.0
Q ss_pred CceEEeecccchhHHHHHHHHHHHhCCCCEEEEcCCCCcchHHHhhhCCCCeeeeee
Q 012628 150 QRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRY 206 (459)
Q Consensus 150 ~~i~~~~t~ggt~a~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~G~~v~~v~~ 206 (459)
+.|+. .++|+.+..++.. .+...-.-.|+++...-..-...++.+|++++.++-
T Consensus 105 ~~vv~--aSsGN~g~alA~~-aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~ 158 (347)
T PRK08329 105 NEVVI--DSSGNAALSLALY-SLSEGIKVHVFVSYNASKEKISLLSRLGAELHFVEG 158 (347)
T ss_pred CEEEE--ECCCcHHHHHHHH-HHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 45666 6778888877632 222222245666654434456677899999998863
No 499
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=31.33 E-value=50 Score=31.94 Aligned_cols=26 Identities=8% Similarity=0.059 Sum_probs=23.4
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 241 PTGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 241 PTG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
+.+-.+|++++++|++.|+++||-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45778999999999999999999887
No 500
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=30.85 E-value=2.4e+02 Score=25.54 Aligned_cols=70 Identities=13% Similarity=0.081 Sum_probs=47.9
Q ss_pred HHHhhhCCCCeeeeeeecCCCCCCCHHHHHHHHHcCCCCcEEEEeCCCCCC---CCCCCCHHHHHHHHHHHHhcCCeeE
Q 012628 191 KNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNP---TGIDPTPEQWEKIADVIQEKNHIPF 266 (459)
Q Consensus 191 ~~~~~~~G~~v~~v~~~~~~~~~~d~e~l~~~i~~~~~~~~~ii~~~p~NP---TG~~~s~~~l~~i~~l~~~~~~~ii 266 (459)
..+++..|+++.. | -|+.|.+.+.+.+-...=+.+++-+...-=+ .|..++.+.++++..+.++||+.+.
T Consensus 105 e~lc~~lGl~~~~-P-----LWg~d~~ell~e~~~~Gf~~~Iv~Vsa~gL~~~~lGr~i~~~~~e~l~~l~~~ygi~~~ 177 (223)
T COG2102 105 ERLCEELGLKVYA-P-----LWGRDPEELLEEMVEAGFEAIIVAVSAEGLDESWLGRRIDREFLEELKSLNRRYGIHPA 177 (223)
T ss_pred HHHHHHhCCEEee-c-----ccCCCHHHHHHHHHHcCCeEEEEEEeccCCChHHhCCccCHHHHHHHHHHHHhcCCCcc
Confidence 4566777776542 2 4678888887776553223334445444444 6899999999999999999998554
Done!