Query 012629
Match_columns 459
No_of_seqs 552 out of 1517
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 04:39:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012629.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012629hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4332 Predicted sugar transp 100.0 4.9E-40 1.1E-44 274.0 26.7 428 1-436 1-433 (454)
2 PF05631 DUF791: Protein of un 100.0 3.5E-35 7.5E-40 260.5 30.3 332 4-336 1-332 (354)
3 COG2814 AraJ Arabinose efflux 100.0 6.4E-30 1.4E-34 232.6 32.6 349 50-435 26-387 (394)
4 PRK10406 alpha-ketoglutarate t 100.0 1.5E-29 3.3E-34 244.2 30.7 336 39-395 20-380 (432)
5 COG2271 UhpC Sugar phosphate p 100.0 1E-29 2.2E-34 227.8 22.6 340 32-395 20-390 (448)
6 PRK03545 putative arabinose tr 100.0 1.6E-28 3.5E-33 234.3 32.3 341 54-433 26-379 (390)
7 PRK09556 uhpT sugar phosphate 100.0 2.2E-29 4.7E-34 245.6 26.3 336 35-395 23-393 (467)
8 PRK11551 putative 3-hydroxyphe 100.0 1.6E-28 3.5E-33 235.9 30.7 330 35-394 9-351 (406)
9 PRK09705 cynX putative cyanate 100.0 2.7E-28 5.8E-33 232.5 31.3 331 56-424 28-371 (393)
10 PRK09952 shikimate transporter 100.0 2E-28 4.3E-33 236.6 30.7 333 39-393 20-385 (438)
11 PRK10642 proline/glycine betai 100.0 2.1E-28 4.5E-33 239.9 30.6 332 40-391 15-382 (490)
12 TIGR00903 2A0129 major facilit 100.0 2.9E-28 6.2E-33 228.7 28.0 306 57-395 11-324 (368)
13 TIGR01299 synapt_SV2 synaptic 100.0 4.7E-28 1E-32 241.9 30.2 179 34-222 160-357 (742)
14 PLN00028 nitrate transmembrane 100.0 2E-28 4.3E-33 238.6 26.5 350 57-430 56-429 (476)
15 PRK15075 citrate-proton sympor 100.0 5.1E-28 1.1E-32 233.8 29.1 333 39-392 13-372 (434)
16 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.7E-28 1E-32 232.0 28.1 332 37-395 4-377 (412)
17 PRK10489 enterobactin exporter 100.0 5.1E-28 1.1E-32 233.0 26.5 339 41-407 21-374 (417)
18 PRK10213 nepI ribonucleoside t 100.0 5.3E-27 1.2E-31 223.4 32.5 330 57-423 40-380 (394)
19 PRK05122 major facilitator sup 100.0 4.9E-27 1.1E-31 225.0 31.7 350 41-433 19-388 (399)
20 PRK11663 regulatory protein Uh 100.0 9.3E-28 2E-32 231.9 26.7 366 36-428 18-418 (434)
21 TIGR00890 2A0111 Oxalate/Forma 100.0 5.2E-28 1.1E-32 230.0 22.6 339 57-425 23-373 (377)
22 TIGR00891 2A0112 putative sial 100.0 2.2E-27 4.8E-32 228.1 27.0 346 35-407 6-390 (405)
23 PRK15402 multidrug efflux syst 100.0 1.2E-26 2.5E-31 222.8 31.5 319 53-394 29-351 (406)
24 PRK12307 putative sialic acid 100.0 6.8E-27 1.5E-31 226.1 29.4 340 37-407 14-383 (426)
25 PRK11273 glpT sn-glycerol-3-ph 100.0 7.4E-27 1.6E-31 226.8 29.3 374 35-435 23-436 (452)
26 PRK09874 drug efflux system pr 100.0 1.9E-26 4.2E-31 221.7 31.5 365 33-431 10-395 (408)
27 TIGR00900 2A0121 H+ Antiporter 100.0 3.7E-27 7.9E-32 223.2 25.9 327 42-395 4-345 (365)
28 PRK11102 bicyclomycin/multidru 100.0 1.2E-26 2.7E-31 220.6 29.4 327 52-404 6-342 (377)
29 PRK10091 MFS transport protein 100.0 3.6E-26 7.8E-31 217.4 31.9 351 40-423 6-365 (382)
30 TIGR00892 2A0113 monocarboxyla 100.0 4.5E-27 9.7E-32 227.9 25.8 337 31-395 9-377 (455)
31 PRK12382 putative transporter; 100.0 6.5E-26 1.4E-30 216.7 33.1 354 34-430 12-385 (392)
32 TIGR00710 efflux_Bcr_CflA drug 100.0 3.8E-26 8.2E-31 218.0 31.2 319 52-394 20-342 (385)
33 PRK15403 multidrug efflux syst 100.0 5.3E-26 1.1E-30 217.8 31.6 320 52-394 31-354 (413)
34 PRK10133 L-fucose transporter; 100.0 3.7E-26 8.1E-31 219.9 30.7 317 52-391 41-386 (438)
35 PRK03893 putative sialic acid 100.0 2.9E-26 6.2E-31 226.2 29.6 350 33-409 12-430 (496)
36 TIGR00899 2A0120 sugar efflux 100.0 5.4E-26 1.2E-30 216.1 29.8 355 43-430 3-370 (375)
37 PRK14995 methyl viologen resis 100.0 4.5E-26 9.8E-31 223.5 29.5 329 40-394 5-394 (495)
38 PRK10077 xylE D-xylose transpo 100.0 2.2E-25 4.9E-30 218.9 32.8 337 36-394 7-407 (479)
39 PRK10504 putative transporter; 100.0 4.1E-26 8.9E-31 223.4 26.8 320 52-394 25-396 (471)
40 PRK15011 sugar efflux transpor 100.0 2.2E-25 4.8E-30 212.7 30.6 365 33-432 11-389 (393)
41 PRK03633 putative MFS family t 99.9 1.9E-25 4.1E-30 212.4 29.1 349 39-431 8-369 (381)
42 TIGR00893 2A0114 d-galactonate 99.9 1.1E-25 2.4E-30 215.5 27.7 345 57-426 14-391 (399)
43 PRK11646 multidrug resistance 99.9 2.6E-25 5.5E-30 212.3 29.1 333 40-407 13-359 (400)
44 PRK11195 lysophospholipid tran 99.9 5.6E-25 1.2E-29 209.4 31.3 324 40-395 6-338 (393)
45 PRK03699 putative transporter; 99.9 1.9E-25 4.2E-30 213.2 28.2 302 57-391 27-333 (394)
46 PF07690 MFS_1: Major Facilita 99.9 1.3E-26 2.8E-31 218.4 19.8 330 44-396 3-344 (352)
47 TIGR00894 2A0114euk Na(+)-depe 99.9 2.4E-25 5.3E-30 217.5 28.7 378 35-431 13-447 (465)
48 TIGR00902 2A0127 phenyl propri 99.9 5.4E-25 1.2E-29 209.2 29.9 349 42-426 9-371 (382)
49 PRK10473 multidrug efflux syst 99.9 7.3E-25 1.6E-29 209.4 30.6 278 37-328 3-284 (392)
50 TIGR00887 2A0109 phosphate:H+ 99.9 3.8E-25 8.2E-30 217.7 29.2 344 31-395 6-436 (502)
51 PRK11652 emrD multidrug resist 99.9 1.3E-24 2.8E-29 207.9 31.2 318 49-394 20-341 (394)
52 TIGR00897 2A0118 polyol permea 99.9 1.1E-24 2.3E-29 208.7 30.5 368 33-428 9-395 (402)
53 PRK15034 nitrate/nitrite trans 99.9 8.9E-25 1.9E-29 206.4 29.0 300 57-382 54-376 (462)
54 PRK10054 putative transporter; 99.9 6.7E-25 1.5E-29 209.1 27.9 355 37-426 7-376 (395)
55 PRK11043 putative transporter; 99.9 2.8E-24 6.1E-29 206.1 32.4 315 51-394 20-338 (401)
56 TIGR00895 2A0115 benzoate tran 99.9 8E-25 1.7E-29 209.8 26.8 330 36-395 12-382 (398)
57 TIGR00711 efflux_EmrB drug res 99.9 4.7E-25 1E-29 217.1 25.5 320 51-395 16-392 (485)
58 TIGR00898 2A0119 cation transp 99.9 9.8E-25 2.1E-29 215.6 27.8 309 58-395 110-454 (505)
59 TIGR00712 glpT glycerol-3-phos 99.9 2.4E-24 5.2E-29 208.5 28.6 334 36-394 22-388 (438)
60 COG2223 NarK Nitrate/nitrite t 99.9 9.7E-25 2.1E-29 196.4 22.7 361 47-435 23-402 (417)
61 PF05977 MFS_3: Transmembrane 99.9 1.2E-23 2.6E-28 203.6 31.1 360 41-429 14-389 (524)
62 TIGR00886 2A0108 nitrite extru 99.9 1E-24 2.2E-29 206.7 23.1 330 45-395 9-361 (366)
63 TIGR00896 CynX cyanate transpo 99.9 1.9E-24 4.1E-29 203.7 23.5 305 56-394 19-329 (355)
64 TIGR00881 2A0104 phosphoglycer 99.9 1.5E-24 3.2E-29 206.5 21.6 314 57-394 15-353 (379)
65 TIGR00879 SP MFS transporter, 99.9 1.2E-23 2.5E-28 206.8 28.2 319 57-395 48-427 (481)
66 PRK11128 putative 3-phenylprop 99.9 2.8E-23 6.1E-28 197.5 28.9 328 46-408 13-356 (382)
67 TIGR00901 2A0125 AmpG-related 99.9 1E-23 2.2E-28 198.9 25.0 321 57-396 8-354 (356)
68 TIGR00883 2A0106 metabolite-pr 99.9 6.8E-24 1.5E-28 203.0 23.5 318 69-408 27-376 (394)
69 PRK11902 ampG muropeptide tran 99.9 6.1E-23 1.3E-27 196.6 29.7 366 43-435 5-391 (402)
70 TIGR00889 2A0110 nucleoside tr 99.9 3E-23 6.5E-28 198.9 27.5 354 43-428 8-396 (418)
71 PRK11010 ampG muropeptide tran 99.9 7.5E-23 1.6E-27 199.9 30.7 366 43-434 18-403 (491)
72 PRK09528 lacY galactoside perm 99.9 1.5E-23 3.2E-28 202.1 24.6 358 39-428 12-397 (420)
73 TIGR00885 fucP L-fucose:H+ sym 99.9 4.7E-23 1E-27 196.7 27.4 312 51-390 17-360 (410)
74 KOG1330 Sugar transporter/spin 99.9 8.6E-25 1.9E-29 198.2 12.9 334 39-394 31-392 (493)
75 cd06174 MFS The Major Facilita 99.9 7.8E-23 1.7E-27 192.4 26.2 326 46-428 8-346 (352)
76 TIGR00882 2A0105 oligosacchari 99.9 2.1E-22 4.6E-27 192.6 25.0 356 38-425 3-386 (396)
77 KOG2532 Permease of the major 99.9 1.3E-22 2.9E-27 193.0 22.9 346 64-434 65-447 (466)
78 TIGR00792 gph sugar (Glycoside 99.9 9.5E-22 2.1E-26 190.9 28.4 311 62-394 25-361 (437)
79 KOG2533 Permease of the major 99.9 3.3E-22 7.2E-27 190.7 24.0 312 57-389 66-405 (495)
80 PRK10207 dipeptide/tripeptide 99.9 1.9E-21 4E-26 189.1 29.0 324 58-395 36-423 (489)
81 PRK06814 acylglycerophosphoeth 99.9 9.6E-22 2.1E-26 212.4 28.7 336 42-395 16-378 (1140)
82 KOG0569 Permease of the major 99.9 4.4E-21 9.6E-26 180.4 28.5 360 65-440 47-461 (485)
83 PRK08633 2-acyl-glycerophospho 99.9 2.5E-21 5.4E-26 209.9 30.7 311 57-395 30-366 (1146)
84 COG0738 FucP Fucose permease [ 99.9 9.6E-21 2.1E-25 169.6 27.6 302 52-384 28-357 (422)
85 TIGR00924 yjdL_sub1_fam amino 99.9 3.9E-20 8.5E-25 179.8 30.1 340 41-395 14-425 (475)
86 PRK09584 tppB putative tripept 99.9 1E-19 2.3E-24 177.9 32.3 321 57-394 41-425 (500)
87 KOG0254 Predicted transporter 99.9 4.2E-20 9.2E-25 182.0 29.6 328 54-394 64-438 (513)
88 PF03825 Nuc_H_symport: Nucleo 99.9 5.2E-20 1.1E-24 173.4 28.8 369 39-430 4-391 (400)
89 TIGR00806 rfc RFC reduced fola 99.9 4.3E-20 9.3E-25 171.3 26.8 332 35-394 22-396 (511)
90 COG2807 CynX Cyanate permease 99.9 1.6E-19 3.5E-24 159.3 27.9 320 57-410 32-362 (395)
91 KOG0252 Inorganic phosphate tr 99.9 4.7E-22 1E-26 179.7 9.7 384 39-438 39-502 (538)
92 TIGR02718 sider_RhtX_FptX side 99.9 3.6E-19 7.7E-24 170.0 29.8 348 52-426 16-383 (390)
93 KOG3764 Vesicular amine transp 99.9 9.9E-21 2.2E-25 168.2 17.2 231 65-312 99-337 (464)
94 KOG2504 Monocarboxylate transp 99.9 1.6E-20 3.4E-25 181.2 19.3 365 35-428 40-470 (509)
95 TIGR00805 oat sodium-independe 99.8 2E-20 4.3E-25 186.9 16.9 266 53-326 49-412 (633)
96 TIGR01301 GPH_sucrose GPH fami 99.8 9.5E-18 2E-22 160.0 31.7 379 49-431 16-468 (477)
97 KOG0253 Synaptic vesicle trans 99.8 1.5E-19 3.2E-24 158.8 16.8 330 34-394 71-477 (528)
98 KOG2615 Permease of the major 99.8 1.6E-18 3.4E-23 153.4 20.6 306 74-404 70-411 (451)
99 PRK09669 putative symporter Ya 99.8 1.7E-17 3.7E-22 161.0 28.9 297 62-382 35-350 (444)
100 PF06609 TRI12: Fungal trichot 99.8 9.5E-17 2.1E-21 155.3 30.8 312 57-392 64-446 (599)
101 PRK09848 glucuronide transport 99.8 6.9E-17 1.5E-21 157.1 29.2 313 57-394 28-369 (448)
102 PRK10429 melibiose:sodium symp 99.8 6E-17 1.3E-21 158.2 28.4 308 57-382 26-355 (473)
103 PF01306 LacY_symp: LacY proto 99.8 3.3E-17 7.1E-22 151.5 23.8 324 39-392 9-353 (412)
104 KOG0255 Synaptic vesicle trans 99.8 4.5E-17 9.8E-22 161.4 26.6 300 65-395 111-450 (521)
105 TIGR00788 fbt folate/biopterin 99.8 1.1E-16 2.4E-21 155.3 28.3 320 57-394 46-394 (468)
106 PF13347 MFS_2: MFS/sugar tran 99.8 2.6E-17 5.6E-22 159.0 22.0 301 62-384 27-348 (428)
107 PTZ00207 hypothetical protein; 99.8 4.6E-17 1E-21 158.5 23.5 121 39-161 26-158 (591)
108 PF11700 ATG22: Vacuole efflux 99.8 5.5E-16 1.2E-20 149.0 29.9 345 75-432 73-466 (477)
109 PF00083 Sugar_tr: Sugar (and 99.8 4.5E-22 9.7E-27 193.9 -13.1 303 73-395 47-393 (451)
110 PRK15462 dipeptide/tripeptide 99.8 7E-16 1.5E-20 147.9 28.9 324 57-394 29-420 (493)
111 COG2211 MelB Na+/melibiose sym 99.7 4.2E-15 9.1E-20 138.9 28.8 307 57-384 32-360 (467)
112 KOG4686 Predicted sugar transp 99.7 1.5E-16 3.2E-21 135.2 14.8 360 44-434 47-443 (459)
113 KOG2563 Permease of the major 99.7 3.7E-15 8E-20 135.6 24.3 337 35-394 39-402 (480)
114 PRK11462 putative transporter; 99.7 8.3E-14 1.8E-18 135.2 29.4 292 64-382 37-349 (460)
115 TIGR01272 gluP glucose/galacto 99.7 1.8E-14 4E-19 132.1 21.4 235 120-384 6-263 (310)
116 COG2270 Permeases of the major 99.6 1.5E-13 3.3E-18 124.6 24.6 302 74-395 60-385 (438)
117 COG3104 PTR2 Dipeptide/tripept 99.6 1.4E-13 3E-18 127.7 23.6 330 52-394 37-437 (498)
118 PF03209 PUCC: PUCC protein; 99.5 3.8E-11 8.3E-16 109.5 29.3 349 63-433 6-397 (403)
119 KOG2325 Predicted transporter/ 99.5 5.4E-12 1.2E-16 118.6 22.6 184 37-226 30-236 (488)
120 TIGR00889 2A0110 nucleoside tr 99.5 2.2E-12 4.7E-17 124.0 17.0 165 58-227 229-410 (418)
121 KOG2816 Predicted transporter 99.4 3.4E-10 7.3E-15 108.0 25.4 279 83-394 73-373 (463)
122 PF03092 BT1: BT1 family; Int 99.3 9.4E-10 2E-14 105.6 26.5 363 58-435 11-414 (433)
123 PRK09528 lacY galactoside perm 99.3 5.4E-11 1.2E-15 114.8 14.1 149 65-220 255-404 (420)
124 PRK15011 sugar efflux transpor 99.3 3.2E-10 6.9E-15 108.4 18.4 151 58-220 237-391 (393)
125 TIGR00902 2A0127 phenyl propri 99.2 4.7E-10 1E-14 106.8 17.8 159 47-214 215-374 (382)
126 TIGR00899 2A0120 sugar efflux 99.2 1.5E-09 3.2E-14 103.2 18.2 145 63-216 226-371 (375)
127 PRK09874 drug efflux system pr 99.2 1.8E-09 3.8E-14 104.0 17.7 153 57-220 239-399 (408)
128 PRK09705 cynX putative cyanate 99.2 2.2E-09 4.8E-14 102.5 18.2 161 57-226 225-388 (393)
129 PRK05122 major facilitator sup 99.2 1.8E-09 4E-14 103.5 17.4 147 57-216 236-386 (399)
130 PRK11128 putative 3-phenylprop 99.1 3.6E-09 7.9E-14 100.8 18.6 148 58-214 226-374 (382)
131 PRK03699 putative transporter; 99.1 2.5E-09 5.4E-14 102.3 16.4 148 57-213 225-374 (394)
132 PRK03545 putative arabinose tr 99.1 5.6E-09 1.2E-13 99.8 18.4 144 63-218 232-379 (390)
133 PRK10489 enterobactin exporter 99.1 5.2E-09 1.1E-13 101.0 18.2 156 58-224 244-404 (417)
134 TIGR00890 2A0111 Oxalate/Forma 99.1 2.2E-09 4.7E-14 102.0 15.3 142 59-211 227-374 (377)
135 PRK11551 putative 3-hydroxyphe 99.1 5.6E-09 1.2E-13 100.4 17.1 148 59-216 242-393 (406)
136 PRK03633 putative MFS family t 99.1 9.7E-09 2.1E-13 97.8 18.5 149 57-215 220-368 (381)
137 PRK11663 regulatory protein Uh 99.1 8.5E-09 1.9E-13 99.9 18.3 136 268-423 43-187 (434)
138 TIGR00880 2_A_01_02 Multidrug 99.1 6.1E-10 1.3E-14 89.5 8.7 128 83-221 9-140 (141)
139 PRK10054 putative transporter; 99.1 6.9E-09 1.5E-13 99.1 16.7 129 248-394 8-139 (395)
140 PF01770 Folate_carrier: Reduc 99.1 1.8E-07 4E-12 86.7 25.0 314 57-394 23-383 (412)
141 KOG3098 Uncharacterized conser 99.0 2E-07 4.4E-12 87.9 25.2 310 78-394 56-395 (461)
142 TIGR00924 yjdL_sub1_fam amino 99.0 3.3E-09 7.2E-14 103.5 13.6 167 244-429 6-187 (475)
143 PRK10642 proline/glycine betai 99.0 1.4E-08 3.1E-13 99.9 17.3 161 57-225 270-435 (490)
144 PRK09952 shikimate transporter 99.0 1.8E-08 3.9E-13 97.7 17.5 158 58-221 271-434 (438)
145 PF03137 OATP: Organic Anion T 99.0 4.5E-11 9.7E-16 116.9 -0.7 258 52-312 18-373 (539)
146 KOG3626 Organic anion transpor 99.0 1.5E-08 3.3E-13 99.6 16.2 252 57-312 117-460 (735)
147 PRK12382 putative transporter; 99.0 2.6E-08 5.6E-13 95.3 17.3 147 57-216 236-386 (392)
148 TIGR02718 sider_RhtX_FptX side 99.0 4.7E-08 1E-12 93.5 17.9 161 47-214 218-386 (390)
149 PRK11646 multidrug resistance 98.9 2.5E-08 5.5E-13 95.5 15.6 150 255-425 18-176 (400)
150 PRK09556 uhpT sugar phosphate 98.9 3.9E-08 8.3E-13 96.3 16.9 153 58-215 279-445 (467)
151 TIGR00891 2A0112 putative sial 98.9 1.3E-08 2.8E-13 97.7 13.4 109 268-394 32-143 (405)
152 cd06174 MFS The Major Facilita 98.9 3.8E-08 8.3E-13 92.4 16.2 156 52-215 190-348 (352)
153 TIGR02332 HpaX 4-hydroxyphenyl 98.9 5.1E-08 1.1E-12 93.7 17.2 140 268-425 28-180 (412)
154 PRK15462 dipeptide/tripeptide 98.9 2.2E-08 4.7E-13 96.7 14.5 164 248-430 10-185 (493)
155 PF07690 MFS_1: Major Facilita 98.9 1.1E-08 2.4E-13 96.2 12.1 142 268-428 16-166 (352)
156 TIGR00710 efflux_Bcr_CflA drug 98.9 3.1E-08 6.6E-13 94.5 15.3 107 270-394 27-136 (385)
157 TIGR00712 glpT glycerol-3-phos 98.9 4.3E-08 9.3E-13 95.2 16.1 113 268-395 47-162 (438)
158 TIGR00792 gph sugar (Glycoside 98.9 4.8E-08 1E-12 94.9 16.5 83 70-153 255-339 (437)
159 TIGR01299 synapt_SV2 synaptic 98.9 4.7E-08 1E-12 99.1 16.3 108 269-394 188-298 (742)
160 TIGR00882 2A0105 oligosacchari 98.9 5.4E-08 1.2E-12 93.3 16.0 139 68-214 250-390 (396)
161 PF11700 ATG22: Vacuole efflux 98.9 1.1E-07 2.4E-12 92.0 17.9 154 65-226 310-474 (477)
162 PRK11273 glpT sn-glycerol-3-ph 98.9 8.8E-08 1.9E-12 93.4 17.5 112 269-395 50-164 (452)
163 PF03825 Nuc_H_symport: Nucleo 98.9 1.6E-07 3.4E-12 89.1 18.4 170 47-221 217-397 (400)
164 COG2271 UhpC Sugar phosphate p 98.9 7.9E-08 1.7E-12 87.9 15.4 148 268-434 49-206 (448)
165 PRK10091 MFS transport protein 98.9 1.6E-07 3.4E-12 89.5 18.3 144 62-213 225-370 (382)
166 TIGR00900 2A0121 H+ Antiporter 98.9 2.7E-08 5.8E-13 94.0 13.0 113 269-394 20-135 (365)
167 COG2814 AraJ Arabinose efflux 98.9 2E-07 4.4E-12 86.1 18.0 145 62-218 237-385 (394)
168 TIGR00883 2A0106 metabolite-pr 98.9 2.3E-08 5.1E-13 95.5 12.4 130 57-194 239-377 (394)
169 PRK10207 dipeptide/tripeptide 98.9 4.5E-08 9.7E-13 95.8 14.0 163 246-427 12-187 (489)
170 TIGR00886 2A0108 nitrite extru 98.8 1.2E-07 2.6E-12 89.8 16.3 109 267-393 20-132 (366)
171 PRK10504 putative transporter; 98.8 8.7E-08 1.9E-12 94.1 15.8 157 248-425 11-176 (471)
172 PRK10213 nepI ribonucleoside t 98.8 1.3E-07 2.8E-12 90.4 16.5 136 270-425 42-186 (394)
173 TIGR00892 2A0113 monocarboxyla 98.8 4.3E-08 9.4E-13 95.5 13.4 150 57-213 261-415 (455)
174 PRK10077 xylE D-xylose transpo 98.8 8.9E-08 1.9E-12 94.3 15.6 160 59-225 293-463 (479)
175 TIGR00893 2A0114 d-galactonate 98.8 4.7E-08 1E-12 93.4 13.2 102 276-394 21-125 (399)
176 KOG0637 Sucrose transporter an 98.8 3.1E-07 6.7E-12 84.7 17.1 148 49-209 44-218 (498)
177 TIGR00897 2A0118 polyol permea 98.8 3.4E-07 7.4E-12 87.8 18.5 147 57-215 242-397 (402)
178 PRK12307 putative sialic acid 98.8 1.1E-07 2.4E-12 92.1 15.1 102 277-395 46-150 (426)
179 TIGR00895 2A0115 benzoate tran 98.8 4.2E-08 9.1E-13 93.9 12.1 111 267-395 36-149 (398)
180 TIGR00881 2A0104 phosphoglycer 98.8 4.7E-08 1E-12 92.9 12.0 108 269-394 16-126 (379)
181 PRK15075 citrate-proton sympor 98.8 2E-07 4.3E-12 90.5 16.4 137 57-198 258-400 (434)
182 PRK10473 multidrug efflux syst 98.8 5.5E-07 1.2E-11 86.2 18.9 81 64-144 231-312 (392)
183 PRK11010 ampG muropeptide tran 98.8 2.7E-07 5.9E-12 90.7 17.1 147 62-216 248-400 (491)
184 PRK15402 multidrug efflux syst 98.8 5.9E-07 1.3E-11 86.4 19.0 122 64-194 243-372 (406)
185 COG2223 NarK Nitrate/nitrite t 98.8 1.5E-07 3.2E-12 86.2 13.6 164 40-216 221-398 (417)
186 PRK11043 putative transporter; 98.8 1.6E-07 3.6E-12 90.1 15.0 140 268-426 23-173 (401)
187 KOG1330 Sugar transporter/spin 98.7 7.2E-09 1.5E-13 95.5 4.2 96 284-396 71-166 (493)
188 PRK09848 glucuronide transport 98.7 2.8E-07 6E-12 89.9 15.6 119 65-184 257-384 (448)
189 TIGR00896 CynX cyanate transpo 98.7 4.7E-07 1E-11 85.4 16.7 131 57-194 217-350 (355)
190 PF01306 LacY_symp: LacY proto 98.7 2.4E-07 5.1E-12 86.5 14.1 149 68-223 255-404 (412)
191 PRK09584 tppB putative tripept 98.7 1.9E-07 4.1E-12 91.9 14.3 163 244-425 17-192 (500)
192 PRK15403 multidrug efflux syst 98.7 3.5E-07 7.7E-12 88.0 15.6 131 278-427 45-184 (413)
193 PRK14995 methyl viologen resis 98.7 3.5E-07 7.6E-12 90.2 15.7 139 267-425 25-173 (495)
194 PRK09669 putative symporter Ya 98.7 2.7E-07 5.9E-12 89.7 14.8 109 76-185 268-385 (444)
195 PRK11195 lysophospholipid tran 98.7 1.2E-06 2.5E-11 83.8 18.5 147 63-216 232-379 (393)
196 PRK11902 ampG muropeptide tran 98.7 1E-06 2.3E-11 84.5 18.2 143 62-216 235-387 (402)
197 PRK15034 nitrate/nitrite trans 98.7 6.2E-07 1.3E-11 85.8 16.3 111 270-393 56-169 (462)
198 PF05977 MFS_3: Transmembrane 98.7 9.8E-07 2.1E-11 86.4 17.9 146 58-214 239-389 (524)
199 TIGR00711 efflux_EmrB drug res 98.7 2.3E-07 5.1E-12 91.4 13.0 110 267-394 21-133 (485)
200 TIGR00879 SP MFS transporter, 98.7 2.7E-07 5.8E-12 90.7 13.1 156 57-223 304-474 (481)
201 PF06963 FPN1: Ferroportin1 (F 98.7 5E-05 1.1E-09 72.0 27.5 144 241-394 253-399 (432)
202 PRK11652 emrD multidrug resist 98.7 9.3E-07 2E-11 84.6 16.3 131 271-421 31-170 (394)
203 PRK03893 putative sialic acid 98.7 5.3E-07 1.2E-11 89.2 15.0 109 268-394 40-151 (496)
204 PLN00028 nitrate transmembrane 98.7 8.2E-07 1.8E-11 87.1 16.1 106 270-394 58-166 (476)
205 TIGR01272 gluP glucose/galacto 98.7 1.1E-06 2.4E-11 80.8 15.7 126 66-204 172-300 (310)
206 PF13347 MFS_2: MFS/sugar tran 98.6 8.7E-07 1.9E-11 85.8 15.5 139 45-185 233-381 (428)
207 PRK11102 bicyclomycin/multidru 98.6 2.9E-06 6.3E-11 80.7 18.9 118 64-187 222-344 (377)
208 KOG2615 Permease of the major 98.6 4.2E-07 9E-12 81.9 11.0 105 284-406 71-181 (451)
209 TIGR00887 2A0109 phosphate:H+ 98.6 1E-06 2.2E-11 87.2 15.0 101 284-395 59-159 (502)
210 PRK10406 alpha-ketoglutarate t 98.6 3.1E-06 6.6E-11 82.1 17.7 57 57-113 263-320 (432)
211 PRK10429 melibiose:sodium symp 98.6 1.8E-06 3.9E-11 84.7 15.8 126 58-184 252-389 (473)
212 TIGR00903 2A0129 major facilit 98.6 1.2E-06 2.7E-11 82.6 14.1 136 269-425 12-156 (368)
213 TIGR00901 2A0125 AmpG-related 98.6 8.6E-07 1.9E-11 83.6 12.8 102 57-159 229-343 (356)
214 TIGR00880 2_A_01_02 Multidrug 98.5 6.3E-07 1.4E-11 71.7 9.9 89 289-394 6-94 (141)
215 KOG3764 Vesicular amine transp 98.5 8.1E-07 1.8E-11 80.5 10.9 193 3-198 228-435 (464)
216 TIGR00885 fucP L-fucose:H+ sym 98.5 2.8E-06 6E-11 81.6 15.4 112 268-394 23-137 (410)
217 PRK10133 L-fucose transporter; 98.5 4.2E-06 9.1E-11 81.1 16.3 134 65-210 288-424 (438)
218 COG2270 Permeases of the major 98.5 2.9E-06 6.3E-11 77.9 13.6 147 65-222 281-431 (438)
219 PRK08633 2-acyl-glycerophospho 98.5 5.1E-06 1.1E-10 91.0 18.3 98 63-161 259-361 (1146)
220 TIGR00806 rfc RFC reduced fola 98.5 7.6E-06 1.6E-10 77.4 16.6 104 274-395 51-158 (511)
221 TIGR00805 oat sodium-independe 98.5 9.8E-07 2.1E-11 89.1 11.5 124 268-394 53-215 (633)
222 KOG4686 Predicted sugar transp 98.5 3.5E-06 7.6E-11 72.8 12.6 157 35-205 262-428 (459)
223 TIGR00898 2A0119 cation transp 98.4 1.5E-06 3.2E-11 86.3 11.6 94 284-394 130-223 (505)
224 PRK11462 putative transporter; 98.4 2.6E-05 5.7E-10 76.1 20.0 112 73-185 264-384 (460)
225 TIGR00894 2A0114euk Na(+)-depe 98.4 4.2E-06 9.2E-11 82.0 14.5 96 284-394 79-174 (465)
226 PF06813 Nodulin-like: Nodulin 98.4 5.1E-06 1.1E-10 72.6 13.1 129 39-168 1-141 (250)
227 TIGR00926 2A1704 Peptide:H+ sy 98.4 1.9E-05 4E-10 79.4 18.7 151 60-216 11-179 (654)
228 KOG3762 Predicted transporter 98.4 4.8E-06 1E-10 78.5 13.3 123 268-407 391-522 (618)
229 PF02487 CLN3: CLN3 protein; 98.4 0.00015 3.2E-09 67.7 22.5 302 75-404 62-390 (402)
230 COG2211 MelB Na+/melibiose sym 98.4 2.2E-05 4.7E-10 74.5 17.2 116 68-184 268-392 (467)
231 PRK06814 acylglycerophosphoeth 98.4 1.4E-05 2.9E-10 87.5 17.7 120 59-183 247-391 (1140)
232 COG2807 CynX Cyanate permease 98.4 2.6E-05 5.6E-10 70.3 16.0 170 39-215 210-381 (395)
233 KOG0569 Permease of the major 98.4 1.1E-05 2.4E-10 77.1 14.5 106 284-403 63-170 (485)
234 TIGR01301 GPH_sucrose GPH fami 98.4 8.8E-06 1.9E-10 78.5 13.9 144 248-394 5-159 (477)
235 PTZ00207 hypothetical protein; 98.3 8.7E-06 1.9E-10 80.4 12.6 115 268-395 47-163 (591)
236 TIGR00788 fbt folate/biopterin 98.3 1.7E-05 3.7E-10 77.4 14.7 119 65-185 281-410 (468)
237 PF12832 MFS_1_like: MFS_1 lik 98.3 1.6E-06 3.5E-11 60.6 5.3 68 45-112 8-75 (77)
238 PF06609 TRI12: Fungal trichot 98.3 8.9E-06 1.9E-10 79.9 12.1 93 284-394 81-173 (599)
239 COG3104 PTR2 Dipeptide/tripept 98.2 1.1E-05 2.4E-10 75.9 11.0 177 243-437 16-209 (498)
240 KOG2504 Monocarboxylate transp 98.2 2.2E-05 4.8E-10 76.7 13.6 152 57-215 318-472 (509)
241 COG0477 ProP Permeases of the 98.2 5.3E-05 1.2E-09 69.4 14.7 103 53-156 18-125 (338)
242 KOG3810 Micronutrient transpor 98.1 0.00031 6.6E-09 62.9 16.9 300 65-394 34-369 (433)
243 KOG0254 Predicted transporter 98.0 5.2E-05 1.1E-09 75.2 12.4 129 284-429 92-225 (513)
244 PF03209 PUCC: PUCC protein; 98.0 0.00066 1.4E-08 62.8 18.4 171 41-216 212-395 (403)
245 KOG3762 Predicted transporter 98.0 1.8E-05 4E-10 74.8 8.5 155 51-212 385-540 (618)
246 TIGR00769 AAA ADP/ATP carrier 98.0 0.0099 2.1E-07 57.4 26.9 55 61-115 27-87 (472)
247 KOG2532 Permease of the major 98.0 0.00016 3.5E-09 69.8 14.2 131 284-430 76-212 (466)
248 KOG0252 Inorganic phosphate tr 98.0 4.1E-05 8.8E-10 71.1 9.4 98 284-391 87-184 (538)
249 KOG0255 Synaptic vesicle trans 98.0 3.4E-05 7.4E-10 76.8 9.9 91 284-391 121-211 (521)
250 KOG2325 Predicted transporter/ 98.0 0.00011 2.3E-09 70.1 12.0 134 244-392 30-170 (488)
251 KOG3574 Acetyl-CoA transporter 97.8 0.0035 7.6E-08 57.1 17.8 114 59-178 52-185 (510)
252 PF06779 DUF1228: Protein of u 97.8 4E-05 8.6E-10 54.0 4.6 76 52-127 7-83 (85)
253 PF05978 UNC-93: Ion channel r 97.7 0.00065 1.4E-08 54.8 11.3 76 78-154 43-118 (156)
254 PF06813 Nodulin-like: Nodulin 97.7 0.0011 2.4E-08 58.1 13.3 126 256-395 11-139 (250)
255 COG0738 FucP Fucose permease [ 97.7 0.0012 2.6E-08 60.7 13.9 129 57-195 256-387 (422)
256 PF00083 Sugar_tr: Sugar (and 97.6 1.7E-06 3.7E-11 84.4 -6.1 98 284-395 49-146 (451)
257 PF05631 DUF791: Protein of un 97.6 0.0069 1.5E-07 55.3 17.0 89 284-390 72-165 (354)
258 KOG2533 Permease of the major 97.5 0.0033 7.2E-08 61.2 14.7 128 284-429 84-222 (495)
259 PF00854 PTR2: POT family; In 97.3 0.011 2.5E-07 55.9 16.0 106 103-216 2-120 (372)
260 KOG0253 Synaptic vesicle trans 97.2 0.0014 3.1E-08 59.4 7.8 115 85-216 394-516 (528)
261 KOG2563 Permease of the major 96.9 0.018 3.9E-07 54.0 12.2 150 246-404 40-195 (480)
262 KOG1479 Nucleoside transporter 96.9 0.17 3.6E-06 47.4 18.4 95 290-394 292-386 (406)
263 KOG3097 Predicted membrane pro 96.8 0.11 2.4E-06 46.8 15.5 90 91-181 77-180 (390)
264 KOG1237 H+/oligopeptide sympor 96.8 0.15 3.3E-06 50.8 18.6 152 57-216 58-242 (571)
265 TIGR00939 2a57 Equilibrative N 96.7 0.61 1.3E-05 45.0 23.9 106 285-395 311-416 (437)
266 PF12832 MFS_1_like: MFS_1 lik 96.2 0.023 5E-07 39.7 6.5 45 267-312 19-66 (77)
267 KOG2816 Predicted transporter 96.2 0.11 2.5E-06 50.3 13.4 116 290-427 71-192 (463)
268 TIGR00926 2A1704 Peptide:H+ sy 96.2 0.062 1.3E-06 54.6 11.8 152 272-432 11-180 (654)
269 PF13000 Acatn: Acetyl-coenzym 95.7 2.1 4.5E-05 41.4 21.2 42 356-397 410-451 (544)
270 PF03219 TLC: TLC ATP/ADP tran 95.5 2.5 5.4E-05 41.4 19.3 77 235-312 268-350 (491)
271 PF03137 OATP: Organic Anion T 95.5 0.0032 6.9E-08 62.3 -0.5 124 276-401 30-193 (539)
272 PF03092 BT1: BT1 family; Int 95.1 0.18 3.8E-06 48.9 10.3 107 274-391 15-128 (433)
273 PF01770 Folate_carrier: Reduc 95.0 2 4.4E-05 40.7 16.4 134 270-421 25-169 (412)
274 PF05978 UNC-93: Ion channel r 94.9 0.34 7.3E-06 39.2 9.6 88 288-393 44-131 (156)
275 TIGR00769 AAA ADP/ATP carrier 94.6 4.4 9.5E-05 39.5 18.0 41 355-395 132-173 (472)
276 PF02487 CLN3: CLN3 protein; 93.0 2.9 6.3E-05 39.6 13.2 85 281-383 59-143 (402)
277 KOG0637 Sucrose transporter an 92.6 0.36 7.7E-06 45.8 6.6 144 248-394 33-186 (498)
278 KOG3880 Predicted small molecu 92.1 3.5 7.6E-05 37.2 11.5 73 75-147 65-138 (409)
279 PRK03612 spermidine synthase; 91.8 5.3 0.00012 39.7 14.1 86 65-152 43-137 (521)
280 PF00854 PTR2: POT family; In 90.4 3.8 8.2E-05 38.8 11.4 113 316-434 4-123 (372)
281 COG0477 ProP Permeases of the 90.2 1.7 3.6E-05 39.2 8.7 97 283-394 41-138 (338)
282 KOG3098 Uncharacterized conser 89.6 17 0.00038 35.2 14.8 95 66-161 272-391 (461)
283 PF07672 MFS_Mycoplasma: Mycop 89.3 4.3 9.4E-05 35.7 9.6 64 196-259 39-106 (267)
284 KOG3626 Organic anion transpor 89.3 0.88 1.9E-05 46.2 6.2 161 276-438 124-347 (735)
285 KOG3574 Acetyl-CoA transporter 85.3 29 0.00062 32.8 12.7 134 244-388 27-170 (510)
286 KOG1479 Nucleoside transporter 83.6 33 0.00071 32.6 12.8 34 353-386 119-152 (406)
287 PF13386 DsbD_2: Cytochrome C 83.4 26 0.00055 29.7 11.4 28 284-311 153-180 (199)
288 PF03219 TLC: TLC ATP/ADP tran 79.2 69 0.0015 31.6 18.4 25 371-395 164-188 (491)
289 KOG4332 Predicted sugar transp 78.7 38 0.00082 30.2 10.5 80 283-380 74-154 (454)
290 PF06779 DUF1228: Protein of u 78.4 7.4 0.00016 27.6 5.2 62 268-332 12-76 (85)
291 PRK03612 spermidine synthase; 77.8 29 0.00063 34.6 11.2 25 356-380 115-139 (521)
292 PF01733 Nucleoside_tran: Nucl 77.5 0.91 2E-05 41.7 0.6 106 285-394 186-291 (309)
293 PF06963 FPN1: Ferroportin1 (F 75.3 30 0.00065 33.4 10.1 113 62-175 283-409 (432)
294 COG3202 ATP/ADP translocase [E 75.0 87 0.0019 30.7 26.5 76 39-114 25-104 (509)
295 KOG2601 Iron transporter [Inor 74.2 80 0.0017 29.8 14.8 39 356-394 391-429 (503)
296 TIGR00939 2a57 Equilibrative N 69.6 73 0.0016 31.0 11.5 31 353-384 108-138 (437)
297 PF09930 DUF2162: Predicted tr 65.7 46 0.00099 28.8 8.1 101 5-115 69-171 (224)
298 COG5336 Uncharacterized protei 63.1 10 0.00022 28.0 3.1 27 78-104 48-75 (116)
299 COG3202 ATP/ADP translocase [E 62.4 1.6E+02 0.0035 28.9 16.0 102 293-396 74-193 (509)
300 COG2119 Predicted membrane pro 55.9 1.2E+02 0.0026 25.2 8.9 28 87-114 149-176 (190)
301 PF08611 DUF1774: Fungal prote 54.3 34 0.00075 24.8 4.5 34 395-428 35-68 (97)
302 PF13000 Acatn: Acetyl-coenzym 50.5 2.6E+02 0.0056 27.8 11.0 20 297-316 56-75 (544)
303 PF02447 GntP_permease: GntP f 49.4 2.6E+02 0.0056 27.2 13.2 53 276-331 51-112 (441)
304 COG4769 Predicted membrane pro 46.8 82 0.0018 25.5 6.0 45 87-136 88-132 (181)
305 PF04172 LrgB: LrgB-like famil 44.5 2.1E+02 0.0045 24.7 9.8 46 279-326 129-174 (215)
306 PF11947 DUF3464: Protein of u 43.3 49 0.0011 26.5 4.4 28 370-397 113-140 (153)
307 PRK11588 hypothetical protein; 41.8 3.6E+02 0.0079 26.8 11.6 36 92-127 136-174 (506)
308 PF06800 Sugar_transport: Suga 40.6 2.7E+02 0.0059 24.9 13.0 22 7-28 105-126 (269)
309 PF03596 Cad: Cadmium resistan 36.9 86 0.0019 26.4 5.1 13 91-103 154-166 (191)
310 KOG3810 Micronutrient transpor 36.7 66 0.0014 30.1 4.7 25 370-394 113-137 (433)
311 PRK11469 hypothetical protein; 36.7 1.8E+02 0.0039 24.4 7.1 26 91-116 154-179 (188)
312 PF03606 DcuC: C4-dicarboxylat 35.7 3.8E+02 0.0082 26.4 10.2 14 300-313 103-116 (465)
313 TIGR00659 conserved hypothetic 35.6 3E+02 0.0064 23.9 11.7 49 279-329 139-187 (226)
314 PF02990 EMP70: Endomembrane p 33.7 4.3E+02 0.0093 26.5 10.4 27 286-312 302-328 (521)
315 PF04346 EutH: Ethanolamine ut 29.6 3.5E+02 0.0077 25.2 8.1 57 85-141 59-119 (354)
316 PF06123 CreD: Inner membrane 27.5 5.8E+02 0.013 24.8 11.7 25 370-394 364-388 (430)
317 PF11299 DUF3100: Protein of u 27.1 98 0.0021 26.8 3.9 62 92-153 127-200 (241)
318 TIGR02123 TRAP_fused TRAP tran 26.7 3.8E+02 0.0081 27.5 8.6 20 149-168 234-253 (613)
319 COG5336 Uncharacterized protei 26.6 2.8E+02 0.006 20.8 6.1 27 286-312 47-74 (116)
320 PF06800 Sugar_transport: Suga 26.1 4.3E+02 0.0093 23.7 7.9 30 395-425 84-114 (269)
321 PRK11715 inner membrane protei 25.6 6.3E+02 0.014 24.6 11.7 26 370-395 370-395 (436)
322 PF11872 DUF3392: Protein of u 25.3 1.3E+02 0.0029 22.4 3.9 37 242-278 43-79 (106)
323 PRK11469 hypothetical protein; 24.8 4.2E+02 0.0091 22.2 14.4 19 294-312 148-166 (188)
324 KOG3880 Predicted small molecu 24.8 2.6E+02 0.0057 25.8 6.2 80 283-379 64-143 (409)
325 PF01810 LysE: LysE type trans 22.6 4.5E+02 0.0097 21.8 12.9 15 298-312 154-168 (191)
326 COG0733 Na+-dependent transpor 21.1 7.8E+02 0.017 24.0 9.3 24 3-26 223-246 (439)
327 KOG1237 H+/oligopeptide sympor 20.6 7E+02 0.015 25.4 9.2 91 290-382 82-183 (571)
328 COG2610 GntT H+/gluconate symp 20.6 8E+02 0.017 24.0 13.7 37 276-312 52-97 (442)
329 PF03547 Mem_trans: Membrane t 20.4 7.3E+02 0.016 23.4 12.1 18 292-309 6-23 (385)
330 COG2836 Uncharacterized conser 20.3 5.8E+02 0.013 22.2 9.4 25 284-308 167-191 (232)
No 1
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-40 Score=273.95 Aligned_cols=428 Identities=86% Similarity=1.401 Sum_probs=376.4
Q ss_pred CchHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccchhhHHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHH
Q 012629 1 MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIA 80 (459)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~ 80 (459)
|+.|||++++++.+.|..+|+++.++++....+.+.+++..++.++.+.+.++++++|++..+++.++....++|.++..
T Consensus 1 MevfyylvFggl~a~vagLELSk~nkdRintsssFnsFknnyllVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfia 80 (454)
T KOG4332|consen 1 MEVFYYLVFGGLAAVVAGLELSKCNKDRINTSSSFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIA 80 (454)
T ss_pred CeeeehHHHHHHHHHHHHhhhhhcccccccCchhHHHHhhhHHHHHHHHHhhhhhcCceeeeeehhcCccCCccceeeec
Confidence 89999999999999999999999999999899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccc
Q 012629 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFE 159 (459)
Q Consensus 81 ~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~ 159 (459)
++...++++.+.|.++|+-|||+.-+.-++.+.++++.-.+++|-.++++|.+.|+..+..+.+..+|++.|+ ++|++.
T Consensus 81 GfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe 160 (454)
T KOG4332|consen 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE 160 (454)
T ss_pred ccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh
Confidence 9999999999999999999999999888888999888899999999999999999999999999999999999 689999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhh
Q 012629 160 QQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGA 239 (459)
Q Consensus 160 ~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (459)
..|....++-....|+.+-.+++++.+..+.+..+.|...+|...+.+..+...++...|.|+.+++.+.++...+.+..
T Consensus 161 qqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~ga 240 (454)
T KOG4332|consen 161 QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGA 240 (454)
T ss_pred HhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHh
Confidence 99999999989989999999999999999999999999999999998888888888889999999988888888888888
Q ss_pred hHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHH
Q 012629 240 AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (459)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~ 319 (459)
.+.+..+++...+..+..++...+|.++..|.|....+..+.+-|.+++.+.+..++|+-+..++..|-..|....+.+.
T Consensus 241 a~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqiv 320 (454)
T KOG4332|consen 241 ARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIV 320 (454)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHH
Confidence 88899999999999999999999999999999999877777778999999999999999999888888766666667777
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhhhHH
Q 012629 320 FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIF 399 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~ 399 (459)
+.+....+.++...... .|. ..+. ..-+++++++-.+.|..+|..+-+-.+..|++.|++.+..+++..+.+
T Consensus 321 f~vs~a~l~Lpilt~~v-sP~---kes~----~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnif 392 (454)
T KOG4332|consen 321 FLVSIAALLLPILTSSV-SPS---KESP----SESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIF 392 (454)
T ss_pred HHHHHHHHHHHHHHhcc-CCC---cCCc----hHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHh
Confidence 77777777776665543 221 1111 244788999999999999999999999999999999999999999998
Q ss_pred HHHhhhc--cCcc--hhHHHHHHHHHHHHHHHHHHhhhhcc
Q 012629 400 VCVVLYN--VDAF--PITVMFGMCSIFLLVASVLQRRLMVI 436 (459)
Q Consensus 400 ~~~~l~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (459)
+...++. .+.. ....++.+|......+.+....+...
T Consensus 393 vClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~L~~v 433 (454)
T KOG4332|consen 393 VCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRRLMTV 433 (454)
T ss_pred hhhhheecccccCccccchhhhhhHHHHHHHHHHHHHHHHh
Confidence 8877754 2222 34578888888888776666555443
No 2
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=3.5e-35 Score=260.51 Aligned_cols=332 Identities=63% Similarity=1.072 Sum_probs=294.6
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCccchhhHHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHH
Q 012629 4 FFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG 83 (459)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~ 83 (459)
||++.+++++++|..++..++++++..+++.++++|+.++.++.++..+|++++|++..+++++|.+..|++.++..++.
T Consensus 1 ~~~~~f~~l~~~~~~l~~~~~~~~~~~~~~~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~ 80 (354)
T PF05631_consen 1 FYYLVFGVLAAVCAALELSKRTKDRASTNPAFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFA 80 (354)
T ss_pred CchhHHHHHHHHHHHHheecccccccccChHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHH
Confidence 68999999999999999999988888888899999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhH
Q 012629 84 SSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWL 163 (459)
Q Consensus 84 ~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~ 163 (459)
.+.+.+++.|.++||+|||+.-+.-+++.++++++-..++++.++++|++.|++....+.+-.+|++.|+++|+....+.
T Consensus 81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999999999999999999999999999999888888999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHh
Q 012629 164 SITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAI 243 (459)
Q Consensus 164 ~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (459)
...+......++++-.+.++++++++.+..+.+-..||.....+.+++.+++...|+|+.++.++..+..++.++..+.+
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i 240 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAI 240 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHH
Confidence 88887666577888888899999998887777778899999999999888888899998877655555556667778889
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHH
Q 012629 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS 323 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~ 323 (459)
.+||+.+.+..+..++.+.+|.++..|.|.+..++.+.+.|.+++.++++.++|+.+..++..|. .|....+.....+.
T Consensus 241 ~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~-~~~e~~l~~v~~~a 319 (354)
T PF05631_consen 241 LSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKS-LRPESLLRYVFAVA 319 (354)
T ss_pred HcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence 99999999999999999999999999999998766677789999999999999999997766554 45555667777777
Q ss_pred HHHHHHHHHhhhc
Q 012629 324 SVSLLLPIVTSFL 336 (459)
Q Consensus 324 ~~~~~~~~~~~~~ 336 (459)
++.+.++.+....
T Consensus 320 a~~l~~pv~~~~~ 332 (354)
T PF05631_consen 320 AVSLAIPVVTHIF 332 (354)
T ss_pred HHHHHHHHHHhhc
Confidence 7777777666544
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.4e-30 Score=232.59 Aligned_cols=349 Identities=17% Similarity=0.202 Sum_probs=246.5
Q ss_pred HHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHH
Q 012629 50 MAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILM 128 (459)
Q Consensus 50 ~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~ 128 (459)
.....+..+.+|++.+|+|+|..+.|++.+.+.....+++|+...+.||+.||++++..+.++.++. ++++++||+.++
T Consensus 26 gttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll 105 (394)
T COG2814 26 GTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLL 105 (394)
T ss_pred HhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3355556999999999999999999999999988899999999999999999999999999999986 779999999999
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHH
Q 012629 129 IGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA 205 (459)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~ 205 (459)
++|++.|+..|..++...+ +..+. ++|++..+.... |..++.++|.+++.++-+. ||||..|+..+
T Consensus 106 ~aR~~~g~a~G~f~~i~~~-~a~~lvpp~~~~~Aiaiv~~--------G~tlA~v~GvPLGt~ig~~--~GWR~~F~~ia 174 (394)
T COG2814 106 LARALAGLAHGVFWSIAAA-LAARLVPPGKRGRALALVFT--------GLTLATVLGVPLGTFLGQL--FGWRATFLAIA 174 (394)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCccchhhHHHHHHH--------HHHHHHHHhccHHHHHHHH--hhHHHHHHHHH
Confidence 9999999999999998855 76665 555555543332 4445555555555555543 67789999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch--
Q 012629 206 CFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH-- 283 (459)
Q Consensus 206 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 283 (459)
.+.++.....+..+|+ ++++++.+.. .++..+.+|+|+.+.......+...+.|.. .+|.-.++++..|.+.
T Consensus 175 ~l~ll~~~~~~~~lP~-~~~~~~~~~~----~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~-ftYi~P~L~~v~g~s~~~ 248 (394)
T COG2814 175 VLALLALLLLWKLLPP-SEISGSLPGP----LRTLLRLLRRPGVLLGLLATFLFMTGHFAL-YTYIRPFLESVAGFSVSA 248 (394)
T ss_pred HHHHHHHHHHHHhCCC-ccCCCCCCcc----hhHHHHHhcCchHHHHHHHHHHHHcchhhh-HHhHHHHHHHccCCCHhH
Confidence 9999998888888881 1111111111 112235678899988888888888887774 5566666666666654
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHH
Q 012629 284 -GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (459)
Q Consensus 284 -~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (459)
++....++++.++|+.++|++.|| +.|+ .+.....+..+....+.+.... .+.......+++
T Consensus 249 vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~--~l~~~~~l~a~~~l~l~~~~~~--------------~~~~~~~~~~wg 311 (394)
T COG2814 249 VSLVLLAFGIAGFIGNLLGGRLADR-GPRR--ALIAALLLLALALLALTFTGAS--------------PALALALLFLWG 311 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccc-cchh--HHHHHHHHHHHHHHHHHHhcch--------------HHHHHHHHHHHH
Confidence 677888999999999999999999 6555 2444444444444443333332 134455555667
Q ss_pred hhhcchhhHHHHHHhccCChhhhhhhhhhhhh------hhhHHHHHhhhccCcchhHHHHHHHHHHHHHHHHHHhhhhc
Q 012629 363 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI------PLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMV 435 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (459)
+..............+..| +.+..+.++... ..|..+|+.+.+. .++......+++..+.+..+.....+
T Consensus 312 ~a~~~~~~~~~~~~a~~~p-~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~--~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 312 FAFSPALQGLQTRLARLAP-DAADLAGSLNVAAFNLGIALGAALGGLVLDA--LGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHhhhhhhHHHHHhcccCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7666666666666666444 445555544443 2455667777776 56666666666666666555544433
No 4
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=1.5e-29 Score=244.25 Aligned_cols=336 Identities=14% Similarity=0.129 Sum_probs=203.2
Q ss_pred hHHHHHHHHHHHHhhhhc----cchhhhhhhccC---CCccc---hhhHHHHHHHHhhhhhccccchhcccCcchhhHHH
Q 012629 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYG---FGKGE---IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY 108 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~---~s~~~---~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~ 108 (459)
++..+....+..+.+++| ....|.+.++++ .+..+ .+.+++..++...++++++|+++||+|||+++..+
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 444555555566666666 444456677774 44443 34556677776778888999999999999999999
Q ss_pred HHHHHHHH-HHhhCCchH--------HHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHH
Q 012629 109 CLTYILSC-ITKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVA 179 (459)
Q Consensus 109 ~~~~~~~~-l~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~ 179 (459)
.++++++. ++++++++. .+++.|+++|++.|..++...+ +++|+.+++++.. .......+...|..++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~-~i~e~~p~~~rg~-~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSAT-YMSEVAVEGRKGF-YASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHH-HHHHhCCCCcccH-HHHHHHHHHHHHHHHHH
Confidence 99999976 668888874 5899999999999999999866 8898833333222 11122333334444444
Q ss_pred HHhhhhhhhccc--ccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHH
Q 012629 180 ILSGLFGNLLVD--SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQS 257 (459)
Q Consensus 180 ~~~~~l~~~l~~--~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (459)
.+...+...+.+ ...|+||.+|++.++..++..++ ....||+++.+++. ++...+.++++++++.+.......
T Consensus 178 ~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~-~~~~~e~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~ 252 (432)
T PRK10406 178 LVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWL-RRQLDETSQQETRA----LKEAGSLKGLWRNRRAFIMVLGFT 252 (432)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHH-HhcCCCCchHHHhh----hcccccHHHHHhhHHHHHHHHHHH
Confidence 443333332211 12578999999877766654433 22455543211111 011223556777887776655544
Q ss_pred hh-hhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHh
Q 012629 258 LF-EGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVT 333 (459)
Q Consensus 258 ~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~ 333 (459)
+. ....+. ...|.|.|+++..+.+. +.......+...++.++.|+++||++||+. +.....+..+........
T Consensus 253 ~~~~~~~~~-~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~--~~~~~~~~~~~~~~~~~~ 329 (432)
T PRK10406 253 AAGSLCFYT-FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTS--MLCFGSLAALFTVPILSA 329 (432)
T ss_pred HHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH--HHHHHHHHHHHHHHHHHH
Confidence 43 344444 57789998876666644 455556666777888899999999998872 333322222221111111
Q ss_pred hhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 334 SFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
.... .+. +.......+.....+...+..+.+.+|.+|++.|+++.|+.+..
T Consensus 330 ~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 330 LQNV-------SSP----YAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHcC-------CcH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 1110 000 11122222222333334456778899999999999999887653
No 5
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1e-29 Score=227.84 Aligned_cols=340 Identities=15% Similarity=0.113 Sum_probs=244.8
Q ss_pred CCccchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHH
Q 012629 32 SSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT 107 (459)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~ 107 (459)
++.++++|+.++...++.+.+.++. .-..|.+.+|.++|.+|+|.+.+..++...+.-.+.|.++||.+.|+.+..
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 3457788888888888888877776 666678999999999999988888777777888899999999999999999
Q ss_pred HHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhh
Q 012629 108 YCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (459)
Q Consensus 108 ~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~ 183 (459)
++++.++.. +.+++++.+.+.+..+++|...|.-+|++.. .+..+ ++||+..+..+.. .++|..+.+.+..
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~-~i~~Wfsr~eRG~~~siWn~s----hNiGGal~~~~~~ 174 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCAR-TITHWFSRKERGTWWSIWNTS----HNIGGALAPLVAL 174 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHH-HHHHHcCccccCceEEEehhh----hhcccchHHHHHH
Confidence 999999975 7799999999999999999999999999977 67766 7788777754443 3334433333321
Q ss_pred hhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCC----------Cchhh-HHH-------HHHhhhHHhcc
Q 012629 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP----------SESKD-LLT-------QFRGAAVAIAS 245 (459)
Q Consensus 184 ~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~~-~~~-------~~~~~~~~~~~ 245 (459)
+ +++..+ ++||..|++.+++.++..++.++..++++++. |+.+. ..+ ..+.-.+.+++
T Consensus 175 l--a~~~~~--~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~ 250 (448)
T COG2271 175 L--AFFAFH--GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLK 250 (448)
T ss_pred H--HHHHhc--cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHc
Confidence 1 555433 36789999999998877776665554433210 11110 000 11123456789
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcC--CCCcchhHHHHH
Q 012629 246 DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARS--PPRVESYMQIVF 320 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~--g~~~~~~l~~~~ 320 (459)
||..|.+++...+.+..-+. +..|.|.|+.|..|.+. +...+.+-.++++|+++.||++||+ |||. ...+.+
T Consensus 251 Nk~iW~la~a~vfvYivR~g-i~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~--p~~~i~ 327 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYG-INDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG--PMALIF 327 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc--hHHHHH
Confidence 99999999999999999998 69999999988777754 6777888899999999999999996 4443 122222
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 321 VVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
.+.... .+..+.... ..+ .++..+.+.+.|+......-..-..+.|..|++..|++.|+....
T Consensus 328 ~~~i~~-~~~~~w~~~-------~~~----~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf 390 (448)
T COG2271 328 MLLITA-SLVLYWLAP-------NGS----YLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLF 390 (448)
T ss_pred HHHHHH-HHHHHHcCC-------Ccc----HHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhH
Confidence 222222 222222111 111 124455566666665555566777899999999999999887763
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=1.6e-28 Score=234.27 Aligned_cols=341 Identities=14% Similarity=0.133 Sum_probs=226.7
Q ss_pred hhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHH
Q 012629 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRI 132 (459)
Q Consensus 54 ~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~ 132 (459)
.+..|++|.+.+|+|.|++++|++.+.......+++++.|+++||+|||+++..+..+.+++. .+++++|++.+++.|+
T Consensus 26 ~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 105 (390)
T PRK03545 26 FVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRI 105 (390)
T ss_pred HHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 344677899999999999999999888887778888899999999999999999999998876 6688999999999999
Q ss_pred HHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHH
Q 012629 133 LGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (459)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~ 209 (459)
++|++.+...+...+ ++.|. ++|++..+.. ..+..+|..++|++++.+.++. +||..|++.+++.+
T Consensus 106 ~~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~g~~--------~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~ 174 (390)
T PRK03545 106 GIAFAHAIFWSITAS-LAIRVAPAGKKAQALSLL--------ATGTALAMVLGLPLGRVIGQYL--GWRTTFLAIGGGAL 174 (390)
T ss_pred HHHHHHHHHHHHHHH-HHHHhCChhhhhhHHHHH--------HHHHHHHHHHHhhHHHHHHHHh--cHHHHHHHHHHHHH
Confidence 999999988887766 77766 4455544422 2344456666666666665443 56777888877776
Q ss_pred HHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHH
Q 012629 210 IGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFI 286 (459)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 286 (459)
+.........||+++++++ . .++.++.+|+|+++.......+.....+. ...+.|.+.++..+.+. +..
T Consensus 175 l~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~s~~~~~~~ 246 (390)
T PRK03545 175 ITLLLLIKLLPLLPSEHSG---S----LKSLPLLFRRPALVSLYLLTVVVVTAHFT-AYSYIEPFVQQVAGLSENFATLL 246 (390)
T ss_pred HHHHHHHHhCCCCCCCCcc---h----HHHHHHHHhCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCccHHHHH
Confidence 6655555455654322111 1 12334567777776554444443333333 34566666665555443 566
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhc
Q 012629 287 FATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVG 366 (459)
Q Consensus 287 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 366 (459)
.....+++++++++.+++.||+++|+ +..+..+.............. .+...+...+.|++.+
T Consensus 247 ~~~~~~~~~~g~~~~g~l~dr~~~~~---~~~~~~~~~~~~~~l~~~~~~--------------~~~~~~~~~l~g~~~~ 309 (390)
T PRK03545 247 LLLFGGAGIIGSVLFSRLGNRHPSGF---LLIAIALLLVCLLLLLPAANS--------------EWHLSVLSIFWGIAIM 309 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhhccchhH---HHHHHHHHHHHHHHHHHHhch--------------HHHHHHHHHHHHHHHh
Confidence 77778889999999999999998765 333333333332222111111 1244556677777776
Q ss_pred chhhHHHHHHhccCChhhhhhhhhhhhh------hhhHHHHHhhhccCcchhHHHHHHHHHHHHHHHHHHhhh
Q 012629 367 IFWPSIMKMRSQYIPEEARSTIMNFFRI------PLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRL 433 (459)
Q Consensus 367 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (459)
...+.....+.|..| +.|++++|+.+. ..++.+++.+.+. .++...+...+.+.+++.+.....
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 310 CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH--LGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cChhHHHHHHHHHHHHHHHHHHHH
Confidence 666777788888877 467887776554 2455666666665 455555555555555554444333
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=2.2e-29 Score=245.58 Aligned_cols=336 Identities=15% Similarity=0.036 Sum_probs=214.1
Q ss_pred cchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHH
Q 012629 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (459)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~ 110 (459)
+.|..+..+..+++..+...++ .+..|.+.+|+|++.++.|++.+..+....++.++.|+++||+|||+++..+.+
T Consensus 23 ~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 23 WFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 4444555566666666655554 677889999999999999999998888888889999999999999999988887
Q ss_pred HHHHHH-HHh-----hCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHH
Q 012629 111 TYILSC-ITK-----HSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAIL 181 (459)
Q Consensus 111 ~~~~~~-l~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~ 181 (459)
++++.. ..+ .++|++.+++.|+++|++.+...|...+ +++|+ ++|++..+.... +.. +|..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~i~~~~~~~~rg~a~gi~~~----~~~----lG~~l 173 (467)
T PRK09556 103 LSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYS-TITRWTPRRKRGRFLGFWNI----SHN----LGGAG 173 (467)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHH-HHHHHcCccceeeeEEeeec----ccc----hhhhH
Confidence 776643 323 3689999999999999999999888766 88887 456777664333 233 34444
Q ss_pred hhhhhhhcccc-cCCccccchhhHHHHHHHHHHHHHhhccccCCC---CCc------h---hhH---HHHH--Hhh-hHH
Q 012629 182 SGLFGNLLVDS-FSLGPVAPFDAAACFLAIGMVIILSSWTENYGD---PSE------S---KDL---LTQF--RGA-AVA 242 (459)
Q Consensus 182 ~~~l~~~l~~~-~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~---~~~------~---~~~---~~~~--~~~-~~~ 242 (459)
++.+..++.+. .+.+||..|.+.+++.++..++.+...++++++ .++ . ++. .++. .+. .+.
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (467)
T PRK09556 174 AGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEY 253 (467)
T ss_pred HHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHH
Confidence 44444433332 122467777776666555444333333322111 000 0 000 0000 011 223
Q ss_pred hcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHH
Q 012629 243 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (459)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~ 319 (459)
.+++|.+|...+...+.+...+. ...|.|.|+++.+|.+. +.......++.+++.++.|+++||++||+. +...
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~--~~~~ 330 (467)
T PRK09556 254 VLKNPVIWLLCFANIFLYIVRIG-IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA--LVAC 330 (467)
T ss_pred HHcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch--HHHH
Confidence 67888888887777766666555 57899999987777754 455666778899999999999999998873 2222
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 320 FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
............. ... .+ .+...+..++.|+..............|.+|++.++++.|+.+..
T Consensus 331 ~~~~~~~~~~~~~-~~~--------~~----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~ 393 (467)
T PRK09556 331 IALALIIFTLGVY-QHA--------TS----EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTF 393 (467)
T ss_pred HHHHHHHHHHHHH-Hhc--------Cc----HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHH
Confidence 2222222111111 111 00 012334444455433223333346777999999999999988764
No 8
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=1.6e-28 Score=235.94 Aligned_cols=330 Identities=18% Similarity=0.173 Sum_probs=216.1
Q ss_pred cchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHH
Q 012629 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (459)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~ 110 (459)
..+++|..+.+++...+.++++ .+..|.+.+|+|.++++.|++.+...+...++.++.|+++||+|||+++..+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 3446777777777777766665 777788899999999999999999888888889999999999999999999998
Q ss_pred HHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhcc---ccccchhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 012629 111 TYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (459)
Q Consensus 111 ~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~---~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (459)
+..++. ++.+++|++.+++.|+++|++.+...+...+ ++.|.. +|++..+. ...+..+|..+++.++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~--------~~~~~~~g~~~~~~~~ 159 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIA-LTSEAVGPRLRGTAVSL--------MYCGVPFGGALASVIG 159 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHH-HHHHHcCHHHHHHHHHH--------HHHHHHHHHHHHHHHH
Confidence 888865 6688899999999999999999998888766 778763 34443332 2224445666666666
Q ss_pred hhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCch--hhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhh
Q 012629 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES--KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMY 264 (459)
Q Consensus 187 ~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (459)
..+.+. ++|+..|++.+++.++.........||++++.+++ ++..++..+...+..++++.+.......+.....+
T Consensus 160 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (406)
T PRK11551 160 VLAAGD--AAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLY 237 (406)
T ss_pred HHHccc--cCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 555543 46677788776655555544444566643321111 11111111111111112222222222222222223
Q ss_pred hhhhhhccccCCCccCCc---hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCC
Q 012629 265 TFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSN 341 (459)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (459)
....|.|.+.++ .|.+ .+.......++.++++++.|++.||++||+. +........+...........
T Consensus 238 -~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~----- 308 (406)
T PRK11551 238 -FLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV--VLLIYAGILASLAALAAAPSF----- 308 (406)
T ss_pred -HHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHhcCcH-----
Confidence 346678887765 3443 3677777888999999999999999998772 333222222222222111111
Q ss_pred CCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 342 VKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+...+..++.+++.+...+..+++..|.+|++.|+++.|+.+.
T Consensus 309 ----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 351 (406)
T PRK11551 309 ----------AGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVA 351 (406)
T ss_pred ----------HHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHH
Confidence 2344455666777666778889999999999999999988776
No 9
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=2.7e-28 Score=232.49 Aligned_cols=331 Identities=15% Similarity=0.166 Sum_probs=211.3
Q ss_pred ccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHH
Q 012629 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (459)
Q Consensus 56 ~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (459)
..|.+|.+.+|+|+|.++.|++.+.......+++++.|+++||+|||+++..+..+++++. ++++++|++.+++.|+++
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~ 107 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLG 107 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHH
Confidence 3899999999999999999999999998888999999999999999999999999999987 679999999999999999
Q ss_pred HhHhhhhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 135 GIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
|++.+...+.... ++.++ ++|++..+ .+..+...|..+|+.+++.+ .++. .+||..+...++..++..
T Consensus 108 Gig~~~~~~~~~~-~~~~~~~~~~~~~~g----~~~~~~~~g~~~g~~~~~~l----~~~~-~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 108 GVGIGIIQAVMPS-VIKRRFQQRTPLVMG----LWSAALMGGGGLGAAITPWL----VQHS-ETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HhHHHHHhhhhhH-HHHHHccccchhHHH----HHHHHHHHHHHHHHHHHHHH----HHhc-CCHHHHHHHHHHHHHHHH
Confidence 9999998887755 77766 33333333 33434444555555555443 3322 245655544333333322
Q ss_pred HHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHH
Q 012629 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFAT 289 (459)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 289 (459)
.......+++ ++++++++ ...++.+++++.+...+...+.....+. ...|.|.+.++ .+.+. +...+.
T Consensus 178 ~~~~~~~~~~-~~~~~~~~------~~~~~~l~~~~~~~l~~~~~~~~~~~~~-~~~~lp~~l~~-~g~s~~~ag~~~~~ 248 (393)
T PRK09705 178 FAWWWQSARE-VASSHKTT------TTPVRVVFTPRAWTLGVYFGLINGGYAS-LIAWLPAFYIE-IGASAQYSGSLLAL 248 (393)
T ss_pred HHHHHHhcCC-CccccCCC------cCCcccccCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-cCCChhhhhHHHHH
Confidence 2222111111 11111111 1112345667777666655555544444 57788888865 45543 677788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchh
Q 012629 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (459)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (459)
..++.++++++.+++.||++||+ ....+..+..+........... .......+.+++.+...
T Consensus 249 ~~i~~i~g~~~~g~l~~r~~~~~--~~~~~~~l~~~~~~~~~~~~~~----------------~~~~~~~l~g~g~g~~~ 310 (393)
T PRK09705 249 MTLGQAAGALLMPAMARHQDRRK--LLMLALVLQLVGFCGFIWLPLQ----------------LPVLWAMVCGLGLGGAF 310 (393)
T ss_pred HHHHHHHHHHHHHHHHhhccchH--HHHHHHHHHHHHHHHHHHccch----------------HHHHHHHHHHHhccchH
Confidence 88999999999999999999886 2344433333333322211111 11122345677777777
Q ss_pred hHHHHHHhccCC-hhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHH
Q 012629 370 PSIMKMRSQYIP-EEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLL 424 (459)
Q Consensus 370 ~~~~~~~~~~~p-~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 424 (459)
|.......+..+ ++.+++..|+.+.. .++.+.+++.+..+ ++...+..+.+..+
T Consensus 311 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g-~~~~~~~~~~~~~~ 371 (393)
T PRK09705 311 PLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG-NYLMDWAFHALCVV 371 (393)
T ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHH
Confidence 777777777774 67788888776652 34455556655533 23444444333333
No 10
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=2e-28 Score=236.56 Aligned_cols=333 Identities=16% Similarity=0.104 Sum_probs=199.0
Q ss_pred hHHHHHHHHHHHHhhhhc----cchhhh-hhhcc--CCCccchhhHH-----HHHHHHhhhhhccccchhcccCcchhhH
Q 012629 39 KNNYLLVYSLMMAGDWLQ----GPYVYY-LYSTY--GFGKGEIGQLF-----IAGFGSSMLFGTIVGSLADKQGRKRACV 106 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~p~l~~-~~~~~--~~s~~~~g~~~-----~~~~~~~~l~~~~~G~l~Dr~Grr~~~~ 106 (459)
+++.+...++..+.+++| ..+.|. +.+++ +.++. .+.+. ++.++...+++++.|+++||+|||+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 455666667777777777 333332 33444 56665 45432 3455555577778999999999999999
Q ss_pred HHHHHHHHHH-HHhhCCchH--------HHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHH
Q 012629 107 TYCLTYILSC-ITKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGL 177 (459)
Q Consensus 107 ~~~~~~~~~~-l~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~ 177 (459)
.+..+++++. ++++++|++ .+++.|+++|++.|..++.... ++.|+.+++++.. .......+..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~~~e~~p~~~rg~-----~~~~~~~g~~~ 172 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAAL-LAVESAPKNKKAF-----YSSGVQVGYGV 172 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHH-HHHHhCCCCCCcH-----HHHHHHHHHHH
Confidence 9999999976 779999987 5889999999999999998855 8888843333321 11122334445
Q ss_pred HHHHhhhhhhhcccc------cCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhh--HHHHHHhhhHHhcchhHH
Q 012629 178 VAILSGLFGNLLVDS------FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKD--LLTQFRGAAVAIASDEKI 249 (459)
Q Consensus 178 g~~~~~~l~~~l~~~------~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 249 (459)
|.++++.+...+.+. ..|+||.+|++.++..++..+ .....||+++..+++++ ..++..+..+.++++|+.
T Consensus 173 G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~-l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 251 (438)
T PRK09952 173 GLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALW-VRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGA 251 (438)
T ss_pred HHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHH
Confidence 555544443332211 247899999887776554332 22244554321111000 000001122235566666
Q ss_pred HHHHHHHHh-hhhhhhhhhhhhccccCCCccCCchh---HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHH
Q 012629 250 ALLGAIQSL-FEGSMYTFVFLWTPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSV 325 (459)
Q Consensus 250 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~ 325 (459)
+.......+ .....+. ...|.|.|.++..+.+.. ......++..+++.++.|+++||+|||+. +..+.....+
T Consensus 252 ~~~~~~~~~~~~~~~~~-~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~--~~~~~~~~~~ 328 (438)
T PRK09952 252 FLKIIALRLCELLTMYI-VTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRV--YITGALIGTL 328 (438)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH--HHHHHHHHHH
Confidence 665443333 2333343 467888888776776654 23334456677888899999999998872 3333332222
Q ss_pred HHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhh
Q 012629 326 SLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (459)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (459)
.. .+........ +. .+..+...++.+++.+...+..+++..|.+|++.|+++.|+..
T Consensus 329 ~~-~~~~~~~~~~------~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~ 385 (438)
T PRK09952 329 SA-FPFFMALEAQ------SI----FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGY 385 (438)
T ss_pred HH-HHHHHHHHcC------Ch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHH
Confidence 22 1111111100 00 0123334555567777777888999999999999988877643
No 11
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=2.1e-28 Score=239.90 Aligned_cols=332 Identities=18% Similarity=0.183 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccch-hh-----HHHHHHHHhhhhhccccchhcccCcchhhHHHH
Q 012629 40 NNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEI-GQ-----LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (459)
Q Consensus 40 ~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~-g~-----~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~ 109 (459)
+..+....+..+.+++| ....|.+.++++.+.++. ++ .+++.++...+++++.|+++||+|||+++..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34455556666667776 455567777886544331 22 246666777788889999999999999999999
Q ss_pred HHHHHHH-HHhhCCchHH--------HHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHH
Q 012629 110 LTYILSC-ITKHSPQYKI--------LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGL 177 (459)
Q Consensus 110 ~~~~~~~-l~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~ 177 (459)
++++++. ++++++|++. +++.|+++|++.|..++...+ ++.|+ ++|++..+. ...+..+|..+
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~-~~~e~~p~~~Rg~~~~~----~~~~~~~G~~l 169 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI-FVAEYSPDRKRGFMGSW----LDFGSIAGFVL 169 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH-HHHHhCCCCCCcHHHHH----HHHHHHHHHHH
Confidence 9999976 7799999874 899999999999999999866 89998 344444332 33333444444
Q ss_pred HHHHhhhhhhhccc--ccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhH----H----HHHHhhhHHhcc-h
Q 012629 178 VAILSGLFGNLLVD--SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDL----L----TQFRGAAVAIAS-D 246 (459)
Q Consensus 178 g~~~~~~l~~~l~~--~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~-~ 246 (459)
|..+...+...+.+ ...|+||++|++.+++.++..++ ....||+++..++.++. . ++.+.+.+++++ +
T Consensus 170 g~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (490)
T PRK10642 170 GAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYL-RHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKH 248 (490)
T ss_pred HHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHH-HHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHh
Confidence 44444343333221 12578999999877655544333 33566643211000000 0 000112333333 2
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHH
Q 012629 247 EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS 323 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~ 323 (459)
++.+.......+.....+.....|.|.|+++..+.+. +.......++.+++.++.|+++||+|||+. +..+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~--~~~~~~~~ 326 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPF--VILGSVAL 326 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH--HHHHHHHH
Confidence 3333333222222222233357789998876656544 344455567788899999999999999872 33333222
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhh
Q 012629 324 SVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (459)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (459)
.+........... ++. .....+.++.+++.+...+....+..|.+|++.|+++.|+
T Consensus 327 ~~~~~~~~~~~~~--------~~~----~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~ 382 (490)
T PRK10642 327 FVLAIPAFILINS--------NVI----GLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAA 382 (490)
T ss_pred HHHHHHHHHHHhC--------CCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHH
Confidence 2211111111111 000 1334455666666666666777888899999999998876
No 12
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=2.9e-28 Score=228.70 Aligned_cols=306 Identities=13% Similarity=0.084 Sum_probs=200.4
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHHH-hhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCIT-KHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~-~~~~~~~~l~~~r~l~G 135 (459)
.|.+|.+.+|+|+|+++.|++.+..+....+++++.|+++||+|||+++..+......+.+. ...+|++.+++.|+++|
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 90 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAA 90 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 78889999999999999999988888878888899999999999999876655544444433 33479999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
++.+... .... .++|+ ++|++..+ ....+..+|..+++.++..+.++ ++||..|.+.+++.++..
T Consensus 91 ~g~~~~~-~~~~-~~~~~~~~~~r~~a~~--------~~~~~~~lG~~l~~~~~~~l~~~--~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 91 LGQPFLL-NAFA-PAASQIREERRDLVIS--------LLSFAMYLGIIFALAAGLKIYTA--GGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred hHhHHHH-HHHH-HHHHHcCHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHc--cchHHHHHHHHHHHHHHH
Confidence 9998654 3334 45665 33444333 22334556666666666666643 567888888777777666
Q ss_pred HHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch--hHHHHHH
Q 012629 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH--GFIFATF 290 (459)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 290 (459)
++.....||+++++++..+. ++..++.++++++|.++.......+.....+. +.+|.|.|+++ .+.+. +......
T Consensus 159 ~~~~~~lp~~p~~~~~~~~~-~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~-~~~wlp~~L~~-~g~s~~~~~~~~l~ 235 (368)
T TIGR00903 159 ILVLAALPALPFQAAEGFGF-KDAVKEFGALAGRKDLWIIGAILGFGVALFDN-LAIWLEAALRP-AGLEDIAGDAVALA 235 (368)
T ss_pred HHHHHHcCCCCCCCCCCcch-HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-CCCChHHHHHHHHH
Confidence 66666778765433221111 11123466788999999988888888777776 57899999965 33433 3333333
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcchhH-HH-HHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcch
Q 012629 291 MLASMLGSSLASRLMARSPPRVESYM-QI-VFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF 368 (459)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~l-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 368 (459)
.+.+.+..++++||..||+.+.. .. .....++..... .... + .+..+....+.+++....
T Consensus 236 ---~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~---~~~~--------~----~~~~~~~~~l~~~~~~~~ 297 (368)
T TIGR00903 236 ---ILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLAL---AFEL--------N----RLALFAFIGIAGLLMLPA 297 (368)
T ss_pred ---HHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH---HHcc--------c----cHHHHHHHHHHHHhhhhh
Confidence 33344445788888765432112 11 222222211111 1110 0 013344455566666667
Q ss_pred hhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 369 WPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
++..+++.+|.+|++.|+++.|+.+..
T Consensus 298 ~~~~~~~~~~~~p~~~rgt~~G~~~~~ 324 (368)
T TIGR00903 298 YAIIMDWIGKFCDKELHGKAAGAIGFT 324 (368)
T ss_pred HHHHHHHHHHhcchhhcCcccchhhHH
Confidence 778889999999999999999888773
No 13
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=4.7e-28 Score=241.88 Aligned_cols=179 Identities=18% Similarity=0.165 Sum_probs=131.7
Q ss_pred ccchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHH
Q 012629 34 AFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (459)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~ 109 (459)
...+++|.+++++.+..+.++++ .+.+|.+.+++|++..+.+++.++.++...++.+++|+++||+|||+.++++.
T Consensus 160 ~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~l 239 (742)
T TIGR01299 160 GHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICL 239 (742)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34677888888878777777665 67778888999999999999989888888899999999999999999999999
Q ss_pred HHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhcc---ccccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q 012629 110 LTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (459)
Q Consensus 110 ~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~---~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (459)
++.+++. +++++++++.++++|++.|++.++..+.... ++.|.. .|+...+..... ..+|.++++.+
T Consensus 240 il~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~-~isE~~p~~~Rg~~~g~~~~~--------~~iG~ila~~l 310 (742)
T TIGR01299 240 SVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFS-YFAEFLAQEKRGEHLSWLCMF--------WMIGGIYAAAM 310 (742)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHH--------HHHHHHHHHHH
Confidence 8888865 6688999999999999999999999988866 888873 344443333222 22333444333
Q ss_pred hhhcccccC-----------CccccchhhHHHHHHHHHHHHHhhcccc
Q 012629 186 GNLLVDSFS-----------LGPVAPFDAAACFLAIGMVIILSSWTEN 222 (459)
Q Consensus 186 ~~~l~~~~~-----------~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 222 (459)
+..+.+..+ ++||+.+++.++..++.++. .+.+||+
T Consensus 311 a~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~-~~~lPES 357 (742)
T TIGR01299 311 AWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA-LTFMPES 357 (742)
T ss_pred HHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHH-HHHcCCC
Confidence 333332222 35788777766655554433 3466774
No 14
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=2e-28 Score=238.64 Aligned_cols=350 Identities=13% Similarity=0.098 Sum_probs=213.0
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
.|++|.+.+|+|++.++.+++.+...+...++.++.|+++||+|||+++..+.++.+++. +++++++++.+++.|+++|
T Consensus 56 ~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G 135 (476)
T PLN00028 56 APLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIG 135 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 788889999999999999988777777677778899999999999999999998888876 5688999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc---cCCccccchhhHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS---FSLGPVAPFDAAACFLA 209 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~---~~~~w~~~f~~~~~~~~ 209 (459)
++.+...+ ... +++|+ ++|+...+. ......+|..++..+.+.+...+.+. ...+||..|++.+++.+
T Consensus 136 ~~~~~~~~-~~~-~i~~~~~~~~rg~a~g~----~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l 209 (476)
T PLN00028 136 FSLATFVS-CQY-WMSTMFNGKIVGTANGI----AAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHI 209 (476)
T ss_pred HHHHhhHH-HHH-HHHHhcChhheeHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHH
Confidence 99886543 334 56776 344554442 22233445555655555544432221 11467888988887776
Q ss_pred HHHHHHHhhccccCCCCC--chh-h---HHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch
Q 012629 210 IGMVIILSSWTENYGDPS--ESK-D---LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH 283 (459)
Q Consensus 210 i~~~~~~~~~~~~~~~~~--~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (459)
+..+.... .++++++.+ +.+ + ..++..+..++.++++++|...+.........+. ...+.|.|+.+..+.+.
T Consensus 210 ~~~l~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~ 287 (476)
T PLN00028 210 IMGILVLT-LGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELT-MDNIIAEYFYDRFGLSL 287 (476)
T ss_pred HHHHHHHH-HcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHH-HHhHHHHHHHHhcCCCH
Confidence 65554443 333222111 000 0 0011122344556778877766655444444343 46678888766666654
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcc---h-hHH-HHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHH
Q 012629 284 ---GFIFATFMLASMLGSSLASRLMARSPPRVE---S-YMQ-IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQL 355 (459)
Q Consensus 284 ---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~---~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (459)
+...+...++.++++++.|+++||++||+. + ... ....+.++.... .... .+ .+...
T Consensus 288 ~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~---~~~~--------~~----~~~~~ 352 (476)
T PLN00028 288 ETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIW---LGRA--------NS----LGAAI 352 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHH---hccc--------ch----HHHHH
Confidence 566677788999999999999999987631 1 111 111111111111 1111 00 01334
Q ss_pred HHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh--hhHHHHHhhhccCc-chhHHHHHHHHHHHHHHHHHH
Q 012629 356 LGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCVVLYNVDA-FPITVMFGMCSIFLLVASVLQ 430 (459)
Q Consensus 356 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 430 (459)
+.+++.+++.+...+..+++..+..| +.++++.|+.+.. .+..+++.+.+.+. .++...+...++..+++.++.
T Consensus 353 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 353 VVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHH
Confidence 44555666655555666677777654 6789998887764 33444444443322 245555555554444444433
No 15
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=5.1e-28 Score=233.79 Aligned_cols=333 Identities=16% Similarity=0.224 Sum_probs=198.0
Q ss_pred hHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHH-HH-----HHHHhhhhhccccchhcccCcchhhHHH
Q 012629 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLF-IA-----GFGSSMLFGTIVGSLADKQGRKRACVTY 108 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~-~~-----~~~~~~l~~~~~G~l~Dr~Grr~~~~~~ 108 (459)
|++....+++..+.+.+| .+..|.+.+|++.++.+.+.+. +. .++...+++++.|+++||+|||+.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 344566666677777777 7778889999999888876432 21 2222235667899999999999999999
Q ss_pred HHHHHHHH-HHhhCCchH--------HHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHH
Q 012629 109 CLTYILSC-ITKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNG 176 (459)
Q Consensus 109 ~~~~~~~~-l~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~ 176 (459)
..++.++. +++++++++ .+++.|+++|++.+...+.... +++|+ ++|++..+......+ .|..
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~~~e~~p~~~rg~~~~~~~~~~~----~g~~ 167 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSV-YLAEIATPGRKGFYTSWQSASQQ----VAVV 167 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHH-HHHhhCCcccchHHHHHHHHHHH----HHHH
Confidence 99998876 678999987 4689999999999998887755 88887 445555554333333 3333
Q ss_pred HHHHHhhhhhhhccc--ccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHH
Q 012629 177 LVAILSGLFGNLLVD--SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGA 254 (459)
Q Consensus 177 ~g~~~~~~l~~~l~~--~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (459)
+|+.+++.+...+.+ ...++||.+|++......+ ........||+++..++ +..++.++..+...++++.+....
T Consensus 168 ~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 244 (434)
T PRK15075 168 FAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-IFLIRRSLEETEEFLAR--KHRPSMREIFRSLAANWRIVLAGM 244 (434)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHh--hhccccccHHHHHHHhHHHHHHHH
Confidence 444444443332211 1246788888875443222 22222223332110000 000011112233344555554433
Q ss_pred HHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHH
Q 012629 255 IQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI 331 (459)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~ 331 (459)
...+.....+.....|.|.|+++..|.+. +.......++.+++.++.|+++||++||+. ........... ..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~--~~~~~~~~~~~-~~~~ 321 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPV--LIAFTVLAILT-AYPA 321 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH--HHHHHHHHHHH-HHHH
Confidence 33333333344467889999887666644 445556678889999999999999998872 33322222111 1111
Q ss_pred HhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhh
Q 012629 332 VTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF 392 (459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 392 (459)
...... .++. ........+.+++.+...+..+.+..|.+|++.|+++.++.
T Consensus 322 ~~~~~~------~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~ 372 (434)
T PRK15075 322 LSWLVA------APSF----ARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLA 372 (434)
T ss_pred HHHHHc------CCch----HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHH
Confidence 111110 0000 12223334455666666677778899999999999998774
No 16
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=4.7e-28 Score=232.05 Aligned_cols=332 Identities=15% Similarity=0.113 Sum_probs=215.1
Q ss_pred hhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHH
Q 012629 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (459)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~ 112 (459)
|.+|..+...++....+++| +...|.+.+|+|++.+++|++.+..++...+++++.|+++||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 44566666667777777776 56667888999999999999999988888899999999999999999999999999
Q ss_pred HHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012629 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (459)
Q Consensus 113 ~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (459)
+++. ++++++|++.+++.|+++|++.+...+.... ++.|+ ++|++..+. +.. +..+|..+++.+++.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~rg~~~~~----~~~----~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILL-YLTFWFPAYFRARANAL----FMI----AMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHcCHHHHHHHHHH----HHH----HHHHHHHHHHHHHHH
Confidence 9876 6688999999999999999999999888755 77887 334444442 222 344555555555555
Q ss_pred cccc----cCCccccchhhHHHHHHHHHHHHHhhccccCCCCC---c-hhhHH-HHH---------------------Hh
Q 012629 189 LVDS----FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS---E-SKDLL-TQF---------------------RG 238 (459)
Q Consensus 189 l~~~----~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~---~-~~~~~-~~~---------------------~~ 238 (459)
+.+. ..++||..|.+.++..++...+.+..+||++++.+ + +++.. +.. +.
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRS 234 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHH
Confidence 4432 23578888988777776655555556666543211 1 11000 000 01
Q ss_pred hhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCC-ccCCc---hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcch
Q 012629 239 AAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVES 314 (459)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 314 (459)
.++.++ ++.++.......+.....+. +..|.|.++++ +.+.+ .+.......++.+++.++.|+++||+++|+.
T Consensus 235 ~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~- 311 (412)
T TIGR02332 235 MLREIF-TPAIMLYTLAYFCLTNTLSA-INIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH- 311 (412)
T ss_pred HHHHhc-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH-
Confidence 122222 35566555555555555444 57899999976 23433 2566777888999999999999999987762
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 315 YMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 315 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
..........+...+ ... .. + . ........+.+++.....+..+....|.+|++.|+++.|+.+.
T Consensus 312 ~~~~~~~~~~~~~~~-~~~-~~---------~-~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~ 376 (412)
T TIGR02332 312 HTALPYLFAAAGWLL-ASA-TD---------H-N---LIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINA 376 (412)
T ss_pred HHHHHHHHHHHHHHH-HHh-cC---------C-H---HHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHH
Confidence 122222222222211 111 11 0 0 1112222333333333334455666788999999999998887
Q ss_pred h
Q 012629 395 P 395 (459)
Q Consensus 395 ~ 395 (459)
.
T Consensus 377 ~ 377 (412)
T TIGR02332 377 T 377 (412)
T ss_pred h
Confidence 4
No 17
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=5.1e-28 Score=233.01 Aligned_cols=339 Identities=16% Similarity=0.096 Sum_probs=218.8
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHh
Q 012629 41 NYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK 119 (459)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~ 119 (459)
.++...++..++.++..+.+|.+.++++.++.+.|++.+...+...+++++.|+++||+|||+++..+..+.+++. ..+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~ 100 (417)
T PRK10489 21 AVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLA 100 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHH
Confidence 3444455666677777888888888999999999999999888888999999999999999999999887776653 222
Q ss_pred -----hCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC
Q 012629 120 -----HSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (459)
Q Consensus 120 -----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (459)
..++++.+++.|+++|++.+...+...+ ++.|..+++++... .+ ....+..+|..+++.+++.+.+..+
T Consensus 101 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~-~~~~~~~~g~~~g~~l~g~l~~~~~ 174 (417)
T PRK10489 101 LNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLA-ATPALVGRENLMQA----GA-ITMLTVRLGSVISPALGGLLIAAGG 174 (417)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhh-hhhhccCHHHHHHH----HH-HHHHHHhHHHHhHHHHHHHHHHHHh
Confidence 2567889999999999998887777655 66666333222221 11 1222444666666676666665455
Q ss_pred CccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 195 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
|+ +.|.+.++..++..+.. ...|+++++++++++..++..+..+..+++|.++...+...+.. .... ...+.|.|
T Consensus 175 ~~--~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~p~~ 249 (417)
T PRK10489 175 VA--WNYGLAAAGTFITLLPL-LRLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLT-MASA-VRVLYPAL 249 (417)
T ss_pred hH--HHHHHHHHHHHHHHHHH-HhCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHH-HHHh-HHHhhHHH
Confidence 54 44666555555444433 35565433322222223333445566677777655443333222 2222 45678888
Q ss_pred CCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccc
Q 012629 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (459)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (459)
.++..|.+. +...+...++.+++.++.+++.||.++++ .+..+..+..+.........+.
T Consensus 250 ~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~--------------- 312 (417)
T PRK10489 250 ADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGL--LMLLSTLGSFLAVGLFGLMPMW--------------- 312 (417)
T ss_pred HHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcch--HHHHHHHHHHHHHHHHHccchH---------------
Confidence 877566544 66777788889999999999999865554 2444444333333332221111
Q ss_pred hhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhcc
Q 012629 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNV 407 (459)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~ 407 (459)
+...+..++.|++.+...+...++++|..|++.|+++.|+.+.. .++.+.+.+.+.
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~ 374 (417)
T PRK10489 313 ILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAM 374 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH
Confidence 24455667777777777778889999999999999999887652 344445555544
No 18
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=5.3e-27 Score=223.38 Aligned_cols=330 Identities=15% Similarity=0.170 Sum_probs=213.4
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
.+.+|.+.+|+|.+++++|+..+.......+++++.|+++||+|||+++..+.++.+++. ++++++|++.+++.|+++|
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 119 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLG 119 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 667889999999999999998888888888999999999999999999999999998876 5688899999999999999
Q ss_pred hHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~ 215 (459)
++.+...+...+ ++.|+.+++++..... .. ..+..+|..++|.+++.+.+. ++||..|++.+++.++.....
T Consensus 120 ~~~g~~~~~~~~-~i~~~~~~~~~~~a~~-~~----~~~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~~l~~~~~l~~ 191 (394)
T PRK10213 120 LALGGFWAMSAS-LTMRLVPPRTVPKALS-VI----FGAVSIALVIAAPLGSFLGEL--IGWRNVFNAAAVMGVLCIFWI 191 (394)
T ss_pred HhhHHHHHHHHH-HHHHHcCHhHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHHHH
Confidence 999999888766 7777732222222111 12 223445666666666666654 466777888776666555444
Q ss_pred HhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhc-cccCCCccCCch---hHHHHHHH
Q 012629 216 LSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT-PALSPNDEEIPH---GFIFATFM 291 (459)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~ 291 (459)
....||+++++++. .+..++.+++|+++.......+.....+.. ..+. |.+.+ ..|.+. +......+
T Consensus 192 ~~~~p~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~-~~g~s~~~~g~~~~~~~ 262 (394)
T PRK10213 192 IKSLPSLPGEPSHQ-------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAF-FTYIRPVYMN-LAGFGVDGLTLVLLSFG 262 (394)
T ss_pred HHHCCCCCcccccc-------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-hcCCChhHHHHHHHHHH
Confidence 44566643222111 112235567788776655444444444443 3344 65654 334433 66777788
Q ss_pred HHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhH
Q 012629 292 LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPS 371 (459)
Q Consensus 292 ~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 371 (459)
++.+++..+.+++.||.+++. +.....+.............. .+......++.|++.+...+.
T Consensus 263 ~~~iig~~~~~~l~~r~~~~~---l~~~~~~~~~~~~~l~~~~~~--------------~~~~~~~~~l~G~~~~~~~~~ 325 (394)
T PRK10213 263 IASFVGTSLSSFILKRSVKLA---LAGAPLVLAVSALVLTLWGSD--------------KIVATGVAIIWGLTFALVPVG 325 (394)
T ss_pred HHHHHHHHHHHHHHhccchhH---HHHHHHHHHHHHHHHHHHhhh--------------HHHHHHHHHHHHHHHHhhhHH
Confidence 899999999999999954332 333322222222222111111 134556678888888888888
Q ss_pred HHHHHhccCChhhhhhhh----hhhhh--hhhHHHHHhhhccCcchhHHHHHHHHHHH
Q 012629 372 IMKMRSQYIPEEARSTIM----NFFRI--PLNIFVCVVLYNVDAFPITVMFGMCSIFL 423 (459)
Q Consensus 372 ~~~~~~~~~p~~~r~~~~----g~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 423 (459)
..+++++..|++ +++.. +..+. ..++.+++.+.+. .+....+..+++..
T Consensus 326 ~~~~~~~~~~~~-~~~~~~~~~~~~~lg~~~G~~l~G~l~~~--~g~~~~~~~~~~~~ 380 (394)
T PRK10213 326 WSTWITRSLADQ-AEKAGSIQVAVIQLANTCGAAIGGYALDN--IGLTSPLMLSGTLM 380 (394)
T ss_pred HHHHHHHHCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cChhhHHHHHHHHH
Confidence 888888888854 33332 22222 3556666777665 34444444444333
No 19
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=4.9e-27 Score=225.00 Aligned_cols=350 Identities=15% Similarity=0.106 Sum_probs=212.0
Q ss_pred HHHHHHHHHHHhhhhccchhhh-hhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH
Q 012629 41 NYLLVYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT 118 (459)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~ 118 (459)
.+....++..++.++..|++|. +.+++|.|+.++|++.+...+...+.+++.|+++||+||||++..+.++.+++. .+
T Consensus 19 ~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~ 98 (399)
T PRK05122 19 SIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLY 98 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHH
Confidence 3444455556677777888886 568899999999999999999899999999999999999999999998887653 32
Q ss_pred h---hCC-----chHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012629 119 K---HSP-----QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (459)
Q Consensus 119 ~---~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (459)
. +.+ +++.+++.|+++|++.+...+...+ ++.|. ++|++..+.. +. +..+|..+++.+++
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~----~~----~~~~g~~~g~~l~~ 169 (399)
T PRK05122 99 LLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSIL-WGIGRVGALHTGRVISWN----GI----ATYGALAIGAPLGV 169 (399)
T ss_pred HHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHH-HHHhhcChhhhccchhhh----hh----hhhHHHHHHHHHHH
Confidence 2 222 5668899999999999999888755 55555 4455544422 22 23344555556666
Q ss_pred hcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhh
Q 012629 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFV 267 (459)
Q Consensus 188 ~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (459)
.+.++. +|+..+.+..++.++..+.. ...|++++++++++ +.++ ..+ +.+.......+.... +...
T Consensus 170 ~l~~~~--g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~----~~~--~~~~~~~~~~~~~~~-~~~~ 235 (399)
T PRK05122 170 LLYHWG--GLAGLGLLIMLLALLGLLLA-RPRPAVPPVKGERL----PFRR----VLG--RVWPYGMGLALASIG-FGTI 235 (399)
T ss_pred HHHHcc--cHHHHHHHHHHHHHHHHHHH-hcCCCCCCCCccch----hHHH----HHH--HHHHHHHHHHHHHHH-HHHH
Confidence 655444 56666666555544333322 23333222111111 1111 111 111111111111122 2223
Q ss_pred hhhccccCCCccCC-chhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 012629 268 FLWTPALSPNDEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (459)
Q Consensus 268 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (459)
..+.|.|.++. +. +.+.......++.+++.+..+++.||+++|+ .+..+..+..+.........+.
T Consensus 236 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------- 302 (399)
T PRK05122 236 ATFITLYYAAR-GWDGAALALTLFGVAFVGARLLFGNLINRLGGLR--VAIVSLLVEILGLLLLWLAPSP---------- 302 (399)
T ss_pred HHHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHhccH----------
Confidence 44556555432 22 3355666777888999999999999999876 2433433333333332222111
Q ss_pred ccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHH
Q 012629 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCS 420 (459)
Q Consensus 347 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~ 420 (459)
+..++..++.|++.+..++.......|..|++.|+++.|+.+.. .+..+.+.+.+. .++...+...+
T Consensus 303 -----~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~ 375 (399)
T PRK05122 303 -----WMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW--FGYPSIFLAAA 375 (399)
T ss_pred -----HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCHHHHHHHHH
Confidence 24456677888888888888888888999999999999887763 122233344443 24555555555
Q ss_pred HHHHHHHHHHhhh
Q 012629 421 IFLLVASVLQRRL 433 (459)
Q Consensus 421 ~~~~~~~~~~~~~ 433 (459)
+..+++.+.....
T Consensus 376 ~~~~~~~~~~~~~ 388 (399)
T PRK05122 376 LAALLGLALTWLL 388 (399)
T ss_pred HHHHHHHHHHHHh
Confidence 5555544444433
No 20
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=9.3e-28 Score=231.86 Aligned_cols=366 Identities=12% Similarity=0.038 Sum_probs=219.2
Q ss_pred chhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHH
Q 012629 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (459)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (459)
+++++......++..+...++ .+.+|.+.+++|+|+++.|++.+...+...+++++.|+++||+|||+++.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 18 RYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 334455544444444444433 6778899999999999999998988888889999999999999999999999999
Q ss_pred HHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012629 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (459)
Q Consensus 112 ~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (459)
.+++. +.++++|++.+++.|++.|++.|...+.... ++.|+ ++|++..+.. ..+..+|..+++.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~-~~~~~~~~~~rg~~~~~~--------~~~~~~g~~~~~~~~~ 168 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAK-LLTAWYSRTERGGWWAIW--------NTAHNVGGALIPLVVG 168 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHH-HHHHhCCHHHHHHHHHHH--------HHHHHHHHHHHHHHHH
Confidence 98876 6688999999999999999999988887766 77776 3344433322 2234456666666666
Q ss_pred hcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCC---------CchhhH-H--H----HHHhhh-HHhcchhHHH
Q 012629 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---------SESKDL-L--T----QFRGAA-VAIASDEKIA 250 (459)
Q Consensus 188 ~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~~~-~--~----~~~~~~-~~~~~~~~~~ 250 (459)
++.+. ++||..|.+.+++.++..+......||++++. ++.++. . + +.++.. +..+++++++
T Consensus 169 ~l~~~--~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (434)
T PRK11663 169 AIALH--YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIW 246 (434)
T ss_pred HHHHc--ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHH
Confidence 66543 46778888777665544333333444432110 000000 0 0 011111 1245667777
Q ss_pred HHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHH-HHHHH
Q 012629 251 LLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV-VSSVS 326 (459)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~-~~~~~ 326 (459)
.......+....... ...|.|.|+++..+.+. +...+...+++++++++.|+++||+.+++.+....... .....
T Consensus 247 ~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~ 325 (434)
T PRK11663 247 LLSFSYVLVYVVRAA-INDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLS 325 (434)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHH
Confidence 766555554444333 56789999876566654 56667777889999999999999983221111211111 11111
Q ss_pred HHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHH
Q 012629 327 LLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFV 400 (459)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~ 400 (459)
.......... +. .......+..+++.............|..|++.|+++.|+.+.. .++..
T Consensus 326 ~~~~~~~~~~---------~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~ 392 (434)
T PRK11663 326 VGSLWLMPFA---------SY----VMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYP 392 (434)
T ss_pred HHHHHHcccc---------cH----HHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhccc
Confidence 1111111111 00 12222222333322222233456678999999999999988763 22233
Q ss_pred HHhhhccCcchhHHHHHHHHHHHHHHHH
Q 012629 401 CVVLYNVDAFPITVMFGMCSIFLLVASV 428 (459)
Q Consensus 401 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 428 (459)
.+.+.+. .++...+...++..++..+
T Consensus 393 ~g~l~~~--~g~~~~f~~~~~~~~~~~~ 418 (434)
T PRK11663 393 LAKVLEI--WHWTGFFVVISIAAGISAL 418 (434)
T ss_pred HHHHHHh--cccHHHHHHHHHHHHHHHH
Confidence 3344444 3355555555444444333
No 21
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=5.2e-28 Score=230.04 Aligned_cols=339 Identities=14% Similarity=0.062 Sum_probs=216.9
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
.+++|.+.+++|+|.+++|++.+...+...+++++.|+++||+|||+++..+.++.+++. ++++++|++.+++.|++.|
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 102 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS 102 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788899999999999999999999999889999999999999999999999999998876 6688999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~ 213 (459)
++.+...+.... .+.|+ ++|++..+ ....+..+|..+++.+.+.+.+. ++||..|.+.+++.++...
T Consensus 103 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 103 AGVGIAYGIALN-TAVKWFPDKRGLASG--------IIIGGYGLGSFILSPLITSVINL--EGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHhHHH-HHHHHcCcccHHHHH--------HHHHhcchhHhHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHH
Confidence 999988777655 66665 33443333 22334445555444444444432 4677888887777766555
Q ss_pred HHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHH
Q 012629 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATF 290 (459)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 290 (459)
......++++++++++++..++.....++..++++.+.......+....... ...+.+.+.++ .+.+. +......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (377)
T TIGR00890 172 LGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLL-LIGLYKPYGQS-LGLSDGFLVLAVSIS 249 (377)
T ss_pred HHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHH-HHHHHHHHHHH-cCCCHHHHHHHHHHH
Confidence 5443443322211111111011112334567777776665444443333332 23344445433 33333 5666777
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhh
Q 012629 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWP 370 (459)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 370 (459)
.+..++++++.+++.||++||+. +..+.....+........... . .+.......+.+++.+...+
T Consensus 250 ~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~g~~~g~~~~ 314 (377)
T TIGR00890 250 SIFNGGGRPFLGALSDKIGRQKT--MSIVFGISAVGMAAMLFIPML-----------N--DVLFLATVALVFFTWGGTIS 314 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHcccc-----------h--hHHHHHHHHHHHHHhccchh
Confidence 88899999999999999998873 444444433333332221111 0 01233445566777777777
Q ss_pred HHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHHH
Q 012629 371 SIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLV 425 (459)
Q Consensus 371 ~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 425 (459)
....+.+|.+|+++|+++.|+.+.. .++.+.+.+.+. .++...+..+++..++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~--~g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 315 LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE--IGFEYTFIVTGAFALT 373 (377)
T ss_pred ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh--hchhhHHHHHHHHHHH
Confidence 7788999999999999999887763 222333334333 3455555555444443
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=2.2e-27 Score=228.09 Aligned_cols=346 Identities=14% Similarity=0.105 Sum_probs=217.5
Q ss_pred cchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHH
Q 012629 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (459)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~ 110 (459)
+++.+|+.+..+++..+.+.++ .+..|.+.+++|.++++.|++.+...+...+++++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4456677777777777766665 777888899999999999999999999899999999999999999999999998
Q ss_pred HHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 012629 111 TYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (459)
Q Consensus 111 ~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (459)
+.+++. +++++++++.+++.|+++|++.+...+...+ ++.|. ++|++..+.. ..+..+|..+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~~l~ 156 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAA-YVIESWPKHLRNKASGLL--------ISGYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHH-HHHHhCChhhhhHHHHHH--------HHHHHHHHHHHHHHH
Confidence 888876 6688999999999999999999999888766 77776 3344433322 223445555555666
Q ss_pred hhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhh---HHHHHHh---h---hHH--------h----cc
Q 012629 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKD---LLTQFRG---A---AVA--------I----AS 245 (459)
Q Consensus 187 ~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~---~~~--------~----~~ 245 (459)
+.+.+..+.+||..|.+.++..++..+ .....||+++.++++++ ..+..++ . .+. . .+
T Consensus 157 ~~l~~~~~~~w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (405)
T TIGR00891 157 SLVVPVWGDGWRALFFISILPIIFALW-LRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGK 235 (405)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhh
Confidence 655544454578888776555444433 33356664321111100 0000000 0 000 0 00
Q ss_pred hhH-HHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHH
Q 012629 246 DEK-IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (459)
Q Consensus 246 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~ 321 (459)
++. +........+...... ....+.|.|.++..+.+. +.......++.++++++.+++.||++||+. +.....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~--~~~~~~ 312 (405)
T TIGR00891 236 RWPTFVYLVVLVLFANLYSH-PIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKA--YVCSLL 312 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHh-hhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhh--hHHHHH
Confidence 111 1111122222222222 235567887766556544 566677788899999999999999998872 333333
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------
Q 012629 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------ 395 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------ 395 (459)
...+........... .+...+...+.+...+...+....+++|.+|++.|+++.|+.+..
T Consensus 313 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 378 (405)
T TIGR00891 313 AGQLLIIPVFAIGAN--------------VAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGA 378 (405)
T ss_pred HHHHHHHHHHHhCCc--------------hHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHH
Confidence 222221111111111 023334445555555666677888999999999999999886652
Q ss_pred hhHHHHHhhhcc
Q 012629 396 LNIFVCVVLYNV 407 (459)
Q Consensus 396 ~~~~~~~~l~~~ 407 (459)
.++.+.+.+.+.
T Consensus 379 ~g~~~~g~l~~~ 390 (405)
T TIGR00891 379 LAPIIGALLAQR 390 (405)
T ss_pred HHHHHHHHHHHh
Confidence 333444555554
No 23
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=1.2e-26 Score=222.84 Aligned_cols=319 Identities=15% Similarity=0.193 Sum_probs=210.3
Q ss_pred hhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHH
Q 012629 53 DWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGR 131 (459)
Q Consensus 53 ~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r 131 (459)
.....|.+|.+.+++|.|+.+.++..+...+...++.++.|+++||+|||+++..+....+++. ...++++++.+++.|
T Consensus 29 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 108 (406)
T PRK15402 29 NDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLR 108 (406)
T ss_pred hhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 3444788888999999999999998888888888888999999999999999999998888875 567889999999999
Q ss_pred HHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHH
Q 012629 132 ILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (459)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~ 211 (459)
+++|++.+...+...+ ++.|.-++..+...... .. .+..++..++|.+++.+.++. +||..|++.+++.++.
T Consensus 109 ~l~G~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~-~~----~~~~~~~~~g~~i~~~l~~~~--~w~~~~~~~~~~~~~~ 180 (406)
T PRK15402 109 FLQGIGLCFIGAVGYA-AIQESFEEADAIKITAL-MA----NVALLAPLLGPLVGAALIHVL--PWRGMFVLFAALAALS 180 (406)
T ss_pred HHHHhHhhhHHHHHHH-HHHHHhChhHHHHHHHH-HH----HHHHHHHHHHHHHHHHHHHcc--CccHHHHHHHHHHHHH
Confidence 9999999888777655 66666222222221111 11 123355566666666666544 4567787777776666
Q ss_pred HHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHH
Q 012629 212 MVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFA 288 (459)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 288 (459)
........||++++.+++. ..++..+..+.++++|+++.......+....... ...+.|.+.++..+.+. +....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~~~~~~g~~~~ 258 (406)
T PRK15402 181 FFGLWRAMPETAGRVGEKL-SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLA-WIALSPVILISGEQLSSYEYGLLQV 258 (406)
T ss_pred HHHHHHhCCCCCccccccc-cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHhCCCHHHHHHHHH
Confidence 5555555676543322221 1223345566788888888776665555443333 34556777665555554 44445
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcch
Q 012629 289 TFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF 368 (459)
Q Consensus 289 ~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 368 (459)
...++.+++.++.+++.||+++|+ .+..+.....+............ ..+ .++..+..++.+++.+..
T Consensus 259 ~~~~~~~~g~~~~g~l~~r~~~~~--~~~~~~~~~~~g~~~~~~~~~~~------~~~----~~~~~~~~~~~g~g~~~~ 326 (406)
T PRK15402 259 PVFGALIAGNLTLARLTSRRPLRS--LIRMGLWPMVAGLLLAALATVIS------SHA----YLWLTAGLSLYAFGIGLA 326 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHHHHHHHHHHHHHcc------ccc----HHHHHHHHHHHHHHHHHH
Confidence 555678889999999999998876 34444444433333333322110 001 124456677788888877
Q ss_pred hhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 369 WPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.+..+...... +++.+++..++.+.
T Consensus 327 ~~~~~~~~~~~-~~~~~g~~~~~~~~ 351 (406)
T PRK15402 327 NAGLYRLTLFS-SDVSKGTVSAAMGM 351 (406)
T ss_pred hhhHHHHHhhh-ccccccHHHHHHHH
Confidence 77666655544 44778888877665
No 24
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.96 E-value=6.8e-27 Score=226.12 Aligned_cols=340 Identities=16% Similarity=0.144 Sum_probs=211.4
Q ss_pred hhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHH
Q 012629 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (459)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~ 112 (459)
++++..+..+.+..+.++++ .+.+|.+.+++|+|+.+.+++.+...+...+++++.|+++||+|||+++..+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45666566666666666665 77778888999999999999988888888889999999999999999999999999
Q ss_pred HHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012629 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (459)
Q Consensus 113 ~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (459)
+++. +.+++++++.+++.|+++|++.+...+.... ++.|. ++|++..+. ...+..+|.++++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~-~~~~~~~~~~r~~~~~~--------~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACAST-YAVESWPKHLKSKASAF--------LVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHH-HHHHhCCHhHhhHhhhH--------HHHHHhHHHHHHHHHHHH
Confidence 9876 6688999999999999999999998888766 77776 334443332 223455666666666666
Q ss_pred cccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCc----hh----hHHHHHHhhhHHhcchhHHHHHHHHHH---
Q 012629 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSE----SK----DLLTQFRGAAVAIASDEKIALLGAIQS--- 257 (459)
Q Consensus 189 l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 257 (459)
+.+. ++||..|++.....++.. ......||+++.+++ ++ +..+......++.+++++++.......
T Consensus 165 l~~~--~~w~~~f~i~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (426)
T PRK12307 165 FAEA--YGWRAAFFVGLLPVLLVI-YIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLF 241 (426)
T ss_pred Hccc--CCHHHHHHHHHHHHHHHH-HHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHH
Confidence 5544 456777776544333322 222234443211000 00 000011123456666666554322211
Q ss_pred hhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 012629 258 LFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTS 334 (459)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~ 334 (459)
......+. ...+.|.|.++. +.+. +...+...++.++++++.+++.||++||+ ....+.....+.........
T Consensus 242 ~~~~~~~~-~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~--~~~~~~~~~~~~~~~~~~~~ 317 (426)
T PRK12307 242 SIFGANWP-IFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK--TFSIGLLMSFLFIFPLFRIP 317 (426)
T ss_pred HHHHHHHH-HHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHHc
Confidence 11112122 355777777653 4443 55667777889999999999999999886 23333333322222211111
Q ss_pred hccCCCCCCCCCccccchhHHHHHHHHHhhh--cchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhc
Q 012629 335 FLVAPSNVKSGGISFSGSLQLLGFCTFEACV--GIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYN 406 (459)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~--~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~ 406 (459)
.. .......++++.+. ....+....++.|.+|++.|+++.|+.+.. .++.+.+.+.+
T Consensus 318 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 318 QD---------------NYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred cc---------------cHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 11 01122233333322 223456677889999999999999876542 33344445544
Q ss_pred c
Q 012629 407 V 407 (459)
Q Consensus 407 ~ 407 (459)
.
T Consensus 383 ~ 383 (426)
T PRK12307 383 T 383 (426)
T ss_pred c
Confidence 4
No 25
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=7.4e-27 Score=226.81 Aligned_cols=374 Identities=11% Similarity=0.056 Sum_probs=217.6
Q ss_pred cchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHH
Q 012629 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (459)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~ 110 (459)
.++.+|.++..+++......++ .+.+|.+.++ |+++.+.|+..+...+...+++++.|+++||+|||+++..+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~ 101 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLI 101 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHH
Confidence 4455566555555555544443 4556777777 9999999999999888888999999999999999999999999
Q ss_pred HHHHHH-HHhhC----CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHh
Q 012629 111 TYILSC-ITKHS----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILS 182 (459)
Q Consensus 111 ~~~~~~-l~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~ 182 (459)
+.+++. +.++. ++++.+++.|++.|++.+...+.... .+.|+ ++|++..+. ++.+..+|.. ..+
T Consensus 102 ~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~-~~~~~~~~~~r~~~~~~----~~~~~~~g~~---~~~ 173 (452)
T PRK11273 102 LAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGR-TMVHWWSQKERGGIVSV----WNCAHNVGGG---LPP 173 (452)
T ss_pred HHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHH-HHHHhCChHHHHHHHHH----HHHHHHhhhh---HHH
Confidence 888865 44554 47788899999999999988776655 56655 334444432 2222222221 222
Q ss_pred hhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCC---CCchh-------------hHHHHHHhh-hHHhcc
Q 012629 183 GLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD---PSESK-------------DLLTQFRGA-AVAIAS 245 (459)
Q Consensus 183 ~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~-------------~~~~~~~~~-~~~~~~ 245 (459)
++.+..+.... +||..|++.+.+.++..++.....||++++ .++++ +..++.++. .+..++
T Consensus 174 ~l~~~~~~~~~--gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (452)
T PRK11273 174 LLFLLGMAWFN--DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLP 251 (452)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHc
Confidence 22221111112 567788887766665544444455543221 00000 000001111 123567
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhH-HHHHH
Q 012629 246 DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYM-QIVFV 321 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l-~~~~~ 321 (459)
++.++...+...+.....+. ...|.|.|+++..+.+. +.......++.+++.++.|+++||+++++.... .....
T Consensus 252 ~~~~~~~~l~~~~~~~~~~~-~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~ 330 (452)
T PRK11273 252 NKLLWYIAIANVFVYLLRYG-ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMT 330 (452)
T ss_pred ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 88888777676666655555 47799999987655543 455666778888999999999999843221111 11112
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhh-----
Q 012629 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL----- 396 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~----- 396 (459)
+..+...... .... .+. +...+...+.+...............|.+|++.|+++.|+.+...
T Consensus 331 l~~~~~~~~~-~~~~--------~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 397 (452)
T PRK11273 331 LVTIATIVYW-LNPA--------GNP----TVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGS 397 (452)
T ss_pred HHHHHHHHHH-Hhcc--------cCh----HHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHH
Confidence 1122211111 1111 000 122233333343322223334456789999999999998876521
Q ss_pred --hHHHHHhhhccCcchhHHHHHHHHHHHHHHHHHHhhhhc
Q 012629 397 --NIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMV 435 (459)
Q Consensus 397 --~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (459)
++.+.+.+.+.. ++...+..+....+++.+......+
T Consensus 398 ~~g~~v~g~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~~~ 436 (452)
T PRK11273 398 VAASAIVGYTVDFF--GWDGGFMVMIGGSILAVILLIVVMI 436 (452)
T ss_pred HhhhhhHHHHHHHh--cchHHHHHHHHHHHHHHHHHHHHhc
Confidence 223334444442 3555665555555555444443433
No 26
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=1.9e-26 Score=221.74 Aligned_cols=365 Identities=18% Similarity=0.157 Sum_probs=223.5
Q ss_pred CccchhhHHHHHHHHHHHHhhhhccchhhhhhhccCCCccc-----hhhHHHHHHHHhhhhhccccchhcccCcchhhHH
Q 012629 33 SAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGE-----IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT 107 (459)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~-----~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~ 107 (459)
.++++.........++..++..+..|++|.+.+++|.+..+ .|.+.+...+...++++++|+++||+|||+.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 89 (408)
T PRK09874 10 INWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLR 89 (408)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHH
Confidence 34444334444455555566677789999999999998765 3778888888888999999999999999999999
Q ss_pred HHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhh
Q 012629 108 YCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (459)
Q Consensus 108 ~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~ 183 (459)
+....+++. +..+.++++.+++.|++.|++.+. .+.... ++.|. ++|++..+ .. ..+..+|..+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~-~~~~~~~~~~~~~~~~----~~----~~~~~~g~~~~~ 159 (408)
T PRK09874 90 SALGMGIVMVLMGLAQNIWQFLILRALLGLLGGF-VPNANA-LIATQVPRNKSGWALG----TL----STGGVSGALLGP 159 (408)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhh-HHhHHH-HHHHhcCHhhhhHHHH----HH----HHHHHHHHHHHH
Confidence 988888875 557789999999999999998654 455544 55555 33333332 22 223445556666
Q ss_pred hhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhh
Q 012629 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (459)
Q Consensus 184 ~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (459)
.+++.+.+.. +||..|.+.+++.++..+......||++++.+++++ .+.+ +..+..++++.+.......+.....
T Consensus 160 ~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (408)
T PRK09874 160 LAGGLLADSY--GLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM--LHMR-EVVTSLKNPKLVLSLFVTTLIIQVA 234 (408)
T ss_pred HHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh--hHHH-HHHHhCcCCchHHHHHHHHHHHHHH
Confidence 6666665443 566778777776666555555455554322211111 1111 2223455666544322222221112
Q ss_pred hhhhhhhccccCCCccCC-c-----hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhcc
Q 012629 264 YTFVFLWTPALSPNDEEI-P-----HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLV 337 (459)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 337 (459)
......+.|.|..+..+. + .+.......++.+++.+..+++.||++||+. +........+...........
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~- 311 (408)
T PRK09874 235 TGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI--LITALIFSVLLLIPMSFVQTP- 311 (408)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh--HHHHHHHHHHHHHHHHHhccH-
Confidence 222344555555442221 1 1344455567788888999999999998872 333333333222222111111
Q ss_pred CCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcch
Q 012629 338 APSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFP 411 (459)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~ 411 (459)
+...+...+.|++.+...+...+...+..|++.+++.+++.+.. .++.+++.+.+. .+
T Consensus 312 --------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~--~g 375 (408)
T PRK09874 312 --------------LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN--YG 375 (408)
T ss_pred --------------HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh--cc
Confidence 24455667788888888898999999999999999988765542 444555555444 34
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 012629 412 ITVMFGMCSIFLLVASVLQR 431 (459)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~ 431 (459)
+...+...++..++..+...
T Consensus 376 ~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 376 FRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 55566666555555444443
No 27
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=3.7e-27 Score=223.24 Aligned_cols=327 Identities=15% Similarity=0.104 Sum_probs=225.1
Q ss_pred HHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhh
Q 012629 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH 120 (459)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~ 120 (459)
++...++..++..+..+.+|.+.++++.++.++|++.+...+...+.++++|+++||+|||+++..+..+..++. +..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 445556666677777788888888999999999999999998888999999999999999999999988877754 4455
Q ss_pred CC-----chHHHHHHHHHHHhHhhhhhhhhhhhhhhhcc---ccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc
Q 012629 121 SP-----QYKILMIGRILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (459)
Q Consensus 121 ~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~---~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~ 192 (459)
.+ |++.+++.|+++|++.+...+...+ ++.|.. +|++..+. . ..+..+|..+++.+++.+.++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~----~~~~~~g~~~g~~l~~~l~~~ 154 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQA-MLPDLVPEEQLTQANSL----S----QAVRSLFYIVGPGIGGLMYAT 154 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHHHHHhH----H----HHHHHHHHHHHHHHHHHHHHH
Confidence 55 8999999999999999999888866 888873 33333332 2 223445556666666666544
Q ss_pred cCCccccchhhHHHHHHHHHHHHHh-hccccCCCCCch-h-hHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhh
Q 012629 193 FSLGPVAPFDAAACFLAIGMVIILS-SWTENYGDPSES-K-DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFL 269 (459)
Q Consensus 193 ~~~~w~~~f~~~~~~~~i~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (459)
. +||..|++.++..++....... ..||++++++++ + +..++..+..+..+++|+++.......+...........
T Consensus 155 ~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (365)
T TIGR00900 155 L--GIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVA 232 (365)
T ss_pred h--hHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 5667777766655554433332 233332211111 1 222334455667788888877666655555554443336
Q ss_pred hccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 012629 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (459)
Q Consensus 270 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (459)
+.|.+.++..+.+. +.......++.+++.++.+++.||.+||+ .+..+....++...........
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------- 300 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMA--LMTGAIFVIGLAILVVGLTPPN---------- 300 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhH--HHHHHHHHHHHHHHHHHhhchh----------
Confidence 77888776455543 66777778889999999999999998876 2333333333333332222110
Q ss_pred ccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 347 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
.+...+..++.+++.+...+...++..|..|++.|+++.|+.+..
T Consensus 301 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (365)
T TIGR00900 301 ----FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSL 345 (365)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 135566778889998888899999999999999999999887763
No 28
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=1.2e-26 Score=220.65 Aligned_cols=327 Identities=14% Similarity=0.140 Sum_probs=212.5
Q ss_pred hhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHH
Q 012629 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~ 130 (459)
+..+..|.+|.+.+++|+++++.+++.+...+...++.++.|+++||+|||+++..+.++.+++. ++.++++++.+++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 44555799999999999999999999888888888999999999999999999999999988876 66888999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHH
Q 012629 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (459)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~ 207 (459)
|+++|++.+...+...+ ++.|. ++|++..+. . ..+..+|..+++.+++.+.+. ++||..|.+.+.+
T Consensus 86 ~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~----~~~~~~g~~~~~~~~~~l~~~--~~~~~~~~~~~~~ 154 (377)
T PRK11102 86 RFLHGLAAAAASVVINA-LMRDMFPKEEFSRMMSF----V----TLVMTIAPLLAPIIGGWLLVW--FSWHAIFWVLALA 154 (377)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHHH----H----HHHHHHHHHHHHHHHHHHHHH--cChHHHHHHHHHH
Confidence 99999999988887766 77776 333443332 2 223445566666666666543 4667778877777
Q ss_pred HHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---h
Q 012629 208 LAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---G 284 (459)
Q Consensus 208 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 284 (459)
.++.........||+++++++++...++..+..++.+++|+.+...+...+.....+. ...+.|.+..+..+.+. +
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g 233 (377)
T PRK11102 155 AILAAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFS-FLTAGPFVYIELNGVSPQNFG 233 (377)
T ss_pred HHHHHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH-HHHcCHHHHHHHhCCCHHHHH
Confidence 6666555555666654332222211222234455677788777665555444444443 34556666655555543 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhh
Q 012629 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (459)
Q Consensus 285 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 364 (459)
.......+..+++.++.+++.||+|+|+. +..+.....+............ .+ .+...+...+...+
T Consensus 234 ~~~~~~~~~~~~~~~~~g~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~ 300 (377)
T PRK11102 234 YYFALNIVFLFVMTIINSRFVRRVGALNM--LRFGLWIQFIMGIWLVVSALLD-------LG----FWALVVGVAAFVGC 300 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHH--HHHHHHHHHHHHHHHHHHHHHh-------hh----HHHHHHHHHHHHHH
Confidence 67777788899999999999999998872 3333332222211111111110 00 01233344444445
Q ss_pred hcchhhHHHHHHhccCChhhhhhhhhhhhh---hhhHHHHHhh
Q 012629 365 VGIFWPSIMKMRSQYIPEEARSTIMNFFRI---PLNIFVCVVL 404 (459)
Q Consensus 365 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~---~~~~~~~~~l 404 (459)
.+...+.......|..| +.++++.++.+. ..+..++...
T Consensus 301 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 301 VSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 55555566677788777 678888777654 2344444444
No 29
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=3.6e-26 Score=217.35 Aligned_cols=351 Identities=13% Similarity=0.082 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH
Q 012629 40 NNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT 118 (459)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~ 118 (459)
+.+....+..........|.+|.+.+|+|.+.++.|++.+.......++++++|+++||+|||+++..+..+.+++. ++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~ 85 (382)
T PRK10091 6 LSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF 85 (382)
T ss_pred HHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 34444444555566666889999999999999999999999888888999999999999999999999999999876 66
Q ss_pred hhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccc
Q 012629 119 KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (459)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~ 198 (459)
++++|++.+++.|+++|++.+...+.... ++.|+.+++++.... + ....+..+|..+++.+++.+.+. ++||
T Consensus 86 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~-~~~~~~~~g~~~g~~l~~~l~~~--~gwr 157 (382)
T PRK10091 86 TLSSSYLMLAIGRLVSGFPHGAFFGVGAI-VLSKIIKPGKVTAAV----A-GMVSGMTVANLLGIPLGTYLSQE--FSWR 157 (382)
T ss_pred HHhCcHHHHHHHHHHHHhhhHHHHHHHHH-HHHHhCChHHhhHHH----H-HHHHHHHHHHHHhccHHHHHhhh--ccHH
Confidence 89999999999999999999988776644 677763333322211 1 22335567777777777776653 4677
Q ss_pred cchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCc
Q 012629 199 APFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (459)
Q Consensus 199 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (459)
+.|.+.+++.++..+......||.++++++ +. ++.. +..++++.+.......+.....+. ...+.+.+.++.
T Consensus 158 ~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 229 (382)
T PRK10091 158 YTFLLIAVFNIAVLASIYFWVPDIRDEAKG--GL----REQF-HFLRSPAPWLIFAATMFGNAGVFA-WFSYIKPYMMFI 229 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCccccc--CH----HHHH-HHhcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 888888777666555555566765432221 11 1112 234556665544433333333332 234455555554
Q ss_pred cCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHH
Q 012629 279 EEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQL 355 (459)
Q Consensus 279 ~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (459)
.|.+. +.......++.++++++.+++.||+++|+. +.....+..+........... .+...
T Consensus 230 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~--~~~~~~~~~i~~~~~~~~~~~--------------~~~~~ 293 (382)
T PRK10091 230 SGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI--AAVTDFIIVLALLMLFFFGGM--------------KTASL 293 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH--HHHHHHHHHHHHHHHHHHHhh--------------HHHHH
Confidence 55543 566777888999999999999999998772 444444434333332222111 01233
Q ss_pred HHHHHHHhhhcchhh-HHHHHHhccCChhhhhhhhhh--hhh--hhhHHHHHhhhccCcchhHHHHHHHHHHH
Q 012629 356 LGFCTFEACVGIFWP-SIMKMRSQYIPEEARSTIMNF--FRI--PLNIFVCVVLYNVDAFPITVMFGMCSIFL 423 (459)
Q Consensus 356 ~~~~l~g~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~--~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 423 (459)
+..++.+.+.....+ .......+..|++.++.+.+. .+. ..++..++.+.+.. .++...+...++..
T Consensus 294 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~~-~~~~~~~~~~~~~~ 365 (382)
T PRK10091 294 IFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTLG-LAYNYVALPAALLS 365 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHcc-cCcchHHHHHHHHH
Confidence 334444444433333 333455555566666654321 111 34555556665542 23444444443333
No 30
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.96 E-value=4.5e-27 Score=227.95 Aligned_cols=337 Identities=9% Similarity=0.069 Sum_probs=213.9
Q ss_pred CCCccchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhH
Q 012629 31 TSSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV 106 (459)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~ 106 (459)
++.+...++|.++..+++....+..+ ..++|.+.+++|.+.++.+++.+..+....+++++.|+++||+|||++++
T Consensus 9 ~~~~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~ 88 (455)
T TIGR00892 9 GPPPDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVI 88 (455)
T ss_pred CCCCCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHH
Confidence 33345566787777766665533333 55678888999999999999988888777888899999999999999999
Q ss_pred HHHHHHHHHH-HHhhCCchHHHHH-HHHHHHhHhhhhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHh
Q 012629 107 TYCLTYILSC-ITKHSPQYKILMI-GRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILS 182 (459)
Q Consensus 107 ~~~~~~~~~~-l~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~ 182 (459)
.+.++.+++. +++++++++.+++ .|+++|++.+...+.... ++.++ ++|++..+ ....+..+|..++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~r~~a~g--------~~~~~~~~g~~~~ 159 (455)
T TIGR00892 89 AGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLT-MLGKYFYRRRPLANG--------LAMAGSPVFLSTL 159 (455)
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHH-HHHHHHHhhHHHHHH--------HHHhcccHHHHHH
Confidence 9998888876 6688899988865 579999998876555544 55665 33444333 2233445666666
Q ss_pred hhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCC----CCC--c------hhhH------HHHHHhh-hHHh
Q 012629 183 GLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG----DPS--E------SKDL------LTQFRGA-AVAI 243 (459)
Q Consensus 183 ~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~----~~~--~------~~~~------~~~~~~~-~~~~ 243 (459)
|.+++.+.+. ++||..|++.+++.++..+......++.+. +++ + ..+. .++..+. ..+.
T Consensus 160 ~~l~~~l~~~--~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (455)
T TIGR00892 160 APLNQYLFES--FGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSL 237 (455)
T ss_pred HHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHH
Confidence 6777766654 466788888777666544333322221110 000 0 0000 0011110 0135
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHH
Q 012629 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVF 320 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~ 320 (459)
+++|+++.......+.....+. ...+.|.|.++ .+.+. +...+..+++.++++++.+++.||...++.+......
T Consensus 238 ~~~~~~~~~~~~~~l~~~~~~~-~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 315 (455)
T TIGR00892 238 FTHRGFLVYLSGNVIMFLGFFA-PIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSF 315 (455)
T ss_pred hcCchHHHHHHHHHHHHHHccc-hHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHH
Confidence 6777777666555554444443 45677777654 35543 5677777888899999999999984322211122222
Q ss_pred --HHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 321 --VVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 321 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
...++........... +..++..++.|++.+...+...+.+.|.+|++.++++.|+.+..
T Consensus 316 ~~~~~~l~~ll~~~~~~~---------------~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 377 (455)
T TIGR00892 316 ALLFNGLTHLLCALAGDY---------------TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIV 377 (455)
T ss_pred HHHHHHHHHHHHHHhchH---------------HHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHH
Confidence 1112211111111111 24556677888888888898999999999999999999888763
No 31
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=6.5e-26 Score=216.68 Aligned_cols=354 Identities=17% Similarity=0.147 Sum_probs=214.1
Q ss_pred ccchhhHHHHHHHHHHHHhhhhccchhhh-hhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHH
Q 012629 34 AFNSFKNNYLLVYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (459)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~ 112 (459)
+.++..+......++..++.++..|.+|. +.+|+|.|++++|.+.+.......+.++++|+++||+||||++..+.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLAC 91 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHH
Confidence 33444445555555566677777888886 46899999999999999999999999999999999999999999988776
Q ss_pred HHHH----HHhh-----CCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHH
Q 012629 113 ILSC----ITKH-----SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAI 180 (459)
Q Consensus 113 ~~~~----l~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~ 180 (459)
.++. +.+. .++++.+++.|+++|++.+...+...+ ++.|. ++|++..+.. +. +...|..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~a~~~~----~~----~~~~g~~ 162 (392)
T PRK12382 92 GLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALT-WGLGLVGPKHSGKVMSWN----GM----AMYGALA 162 (392)
T ss_pred HHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhCCccccchhhhHH----HH----HHHHHHH
Confidence 6542 1122 357889999999999999988877655 55555 5555555532 22 3334555
Q ss_pred HhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhh
Q 012629 181 LSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFE 260 (459)
Q Consensus 181 ~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (459)
+++.+++.+.+.. +|+..+.+..++.++.... ....||.++++++ ++ +.++..+..++ +... ..+..
T Consensus 163 ~g~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~---~~~~~~~~~~~-~~~~-----~~l~~ 229 (392)
T PRK12382 163 AGAPLGLLLHSHF--GFAALALTTMVLPLLAWAF-NGTVRKVPAHAGE-RP---SLWSVVGLIWK-PGLG-----LALQG 229 (392)
T ss_pred HHHHHHHHHHhcc--ChHHHHHHHHHHHHHHHHH-HHhccCCCCCccc-Cc---hHHHHHHHHHH-hHHH-----HHHHH
Confidence 5556666555433 5565555444433332222 2234443222111 11 11111111111 1111 11111
Q ss_pred hhhhhhhhhhccccCCCccCC-chhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCC
Q 012629 261 GSMYTFVFLWTPALSPNDEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAP 339 (459)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 339 (459)
.. +.....+.|.|.++. +. +.+.......++.+++++..+++.||+++|+. +..+..+..+...........
T Consensus 230 ~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~--- 302 (392)
T PRK12382 230 VG-FAVIGTFVSLYFASK-GWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV--AIVSLLVETVGLLLLWLAPTA--- 302 (392)
T ss_pred HH-HhHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCee--hHHHHHHHHHHHHHHHHcccH---
Confidence 11 212344555555442 33 23555566677788999999999999998873 444444444433332221111
Q ss_pred CCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhH
Q 012629 340 SNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPIT 413 (459)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~ 413 (459)
+...+...+.+++.+...+...+...|..|++.|+++.|+.+.. .++.+.+.+.+. .++.
T Consensus 303 ------------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~--~g~~ 368 (392)
T PRK12382 303 ------------WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS--FGYP 368 (392)
T ss_pred ------------HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCch
Confidence 24455667778888877888888899999999999999887763 233444444444 2455
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012629 414 VMFGMCSIFLLVASVLQ 430 (459)
Q Consensus 414 ~~~~~~~~~~~~~~~~~ 430 (459)
..+...+...++.....
T Consensus 369 ~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 369 SVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55555555554444433
No 32
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=3.8e-26 Score=218.00 Aligned_cols=319 Identities=14% Similarity=0.099 Sum_probs=216.7
Q ss_pred hhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHH
Q 012629 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~ 130 (459)
+..+..|.+|.+.+++|.++++++++.+.......+++++.|+++||+|||+.+..+.++.+++. +..++++++.+++.
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVL 99 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 45555888999999999999999999998888888889999999999999999999999888876 66888999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHH
Q 012629 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (459)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i 210 (459)
|++.|++.+...+...+ ++.|..+++++..... .... ...+|..+++.+++.+.++ ++||..|.+.+...++
T Consensus 100 ~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~----~~~~g~~~g~~~~~~l~~~--~~~~~~~~~~~~~~~~ 171 (385)
T TIGR00710 100 RFVQAFGASAGSVISQA-LVRDIYPGEELSRIYS-ILMP----VLALAPAVAPLLGGYILVW--LSWHAIFAFLSLAGIL 171 (385)
T ss_pred HHHHHcchhHHHHHHHH-HHHHhcCcHHHHHHHH-HHHH----HHHHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHH
Confidence 99999999999888766 7887733222222111 2222 3345555555666665543 4567778877776666
Q ss_pred HHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHH
Q 012629 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIF 287 (459)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 287 (459)
.........||+++++++.+ .++..+..++.+++|+++...+...+.....+. ...+.|.+.++..+.+. +...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~ 248 (385)
T TIGR00710 172 LSALIFFILPETLPYEARIQ--ISTYFETFLLLLKSKMFWGYALIYGASFGGFFA-FFSGAPFVYIDIMGVSPSVFGLLF 248 (385)
T ss_pred HHHHHHHhCCCCCCCcccCC--HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH-HHHcChHHHHHHcCCCHHHHHHHH
Confidence 65555545666544332211 122234455677888887776665555544444 45667877765556544 5666
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcc
Q 012629 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (459)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (459)
....++.+++.++.+++.||+++|+. +..+.....+............. +. .........+.+++.+.
T Consensus 249 ~~~~~~~~~~~~~~g~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~~g~~~~~ 316 (385)
T TIGR00710 249 ALNIIAMIFGGFLNGRFIKKWGAKSL--LRMGLILFAVSAVLLEITAILGL------GS----WAMIIGPMMFVGIGNSM 316 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHH--HHHHHHHHHHHHHHHHHHHHhcc------ch----HHHHHHHHHHHHHHHHH
Confidence 77778899999999999999998773 33333333333333222211100 00 01334456667788888
Q ss_pred hhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 368 FWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
..+.......|..| +.++++.++.+.
T Consensus 317 ~~~~~~~~~~~~~~-~~~g~~~~~~~~ 342 (385)
T TIGR00710 317 ISSIAMAYALEDFP-HVAGTASALFGT 342 (385)
T ss_pred HHHHHHHHHhccCc-ccchHHHHHHHH
Confidence 88888888899887 468888877665
No 33
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=5.3e-26 Score=217.80 Aligned_cols=320 Identities=15% Similarity=0.141 Sum_probs=202.1
Q ss_pred hhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHH
Q 012629 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~ 130 (459)
...+..|.+|.+.+++|.+.++.++..+..++...++++++|+++||+|||+++..+..+++++. ++++++|++.++++
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~ 110 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIA 110 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 34444899999999999999999998888888888899999999999999999999999998876 66889999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHH
Q 012629 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (459)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i 210 (459)
|+++|++.+...+.... ++.|..++.++..... ... .+..+++.++|.+++.+.++ ++||..|++.+++.++
T Consensus 111 r~l~Gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~g~~lg~~l~~~--~gw~~~f~~~~~~~~i 182 (413)
T PRK15403 111 RFIQGTSICFIATVGYV-TVQEAFGQTKGIKLMA-IIT----SIVLVAPIIGPLSGAALMHF--VHWKVLFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHH-HHH----HHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHH
Confidence 99999998866555433 5666533222222111 122 23445566666666665543 4677889888877777
Q ss_pred HHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHH
Q 012629 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIF 287 (459)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 287 (459)
..+...+..||++++++++. ..++..++++.+++||+++...+...+.....+. ...+.|.+.++..+.+. +...
T Consensus 183 ~~~~~~~~lp~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~-~~~~~P~~l~~~~g~s~~~~gl~~ 260 (413)
T PRK15403 183 AFVGLLLAMPETVKRGAVPF-SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMS-WVAVSPVILIDAGGMTTSQFAWTQ 260 (413)
T ss_pred HHHHHHHhCCCCccccCCCC-ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHhChHHHHHhcCCCHHHHHHHH
Confidence 66655556787654332211 1223344666788999998877776666555554 46678988887777655 4444
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcc
Q 012629 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (459)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (459)
.....+.+++..+.+++.+|..+++. ......+...+..+........ + +. .+......++.+.+.+.
T Consensus 261 ~~~~~~~~i~~~l~~~~~~~~~~~~~--~~~~~~~~~ig~~l~~~~~~~~-~-----~~----~~~~~~~~~l~~~G~~~ 328 (413)
T PRK15403 261 VPVFGAVIVANAIVARFVKDPTEPRF--IWRAVPIQLVGLALLIVGNLLW-P-----HV----WLWSVLGTSLYAFGIGL 328 (413)
T ss_pred HHHHHHHHHHHHHHHHHhccCCchhH--HHHHHHHHHHHHHHHHHHHHHc-c-----cc----HHHHHHHHHHHHHHHHH
Confidence 45556677777777776654433331 2111111111111111111000 0 00 01245677778888888
Q ss_pred hhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 368 FWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
..|......-+.. +..+|++.++.+.
T Consensus 329 ~~p~~~~~al~~~-~~~~G~a~a~~~~ 354 (413)
T PRK15403 329 IFPTLFRFTLFSN-NLPKGTVSASLNM 354 (413)
T ss_pred HhHHHHHHHhccC-CCCCcHHHHHHHH
Confidence 8777774332211 1125666555544
No 34
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=3.7e-26 Score=219.92 Aligned_cols=317 Identities=12% Similarity=0.126 Sum_probs=203.1
Q ss_pred hhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH---hhCCchHHH
Q 012629 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKIL 127 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~---~~~~~~~~l 127 (459)
......+++|.+.+++|+|+++.|++.+..+....+.+++.|+++||+|||+++..+..+++++. ++ .++++++.+
T Consensus 41 ~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~l 120 (438)
T PRK10133 41 ANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLF 120 (438)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 44444888899999999999999999888888888999999999999999999999999999876 33 468999999
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc-------------c-cc
Q 012629 128 MIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV-------------D-SF 193 (459)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~-------------~-~~ 193 (459)
+++|+++|++.+...+...+ ++.|..++.++... .........+|..+|+.+++.+..... + ..
T Consensus 121 l~~r~l~G~g~g~~~~~~~~-~v~~~~~~~~~~~~-~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~ 198 (438)
T PRK10133 121 LVGLFIIAAGLGCLETAANP-FVTVLGPESSGHFR-LNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLS 198 (438)
T ss_pred HHHHHHHHHHHHHHHhhHHH-HHHHhCChhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHH
Confidence 99999999999999998877 76666222222111 112333344455555554443321100 0 01
Q ss_pred CC------ccccchhhHH-HHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhh
Q 012629 194 SL------GPVAPFDAAA-CFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTF 266 (459)
Q Consensus 194 ~~------~w~~~f~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (459)
+| +||.+|+... +..++..+......||.++++++ ++..++..+..++++++|+++...+...+.....+.
T Consensus 199 ~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~- 276 (438)
T PRK10133 199 AYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS-DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTA- 276 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-cccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHH-
Confidence 23 4666775433 33333333333345553221111 111111223345677888776655554444444443
Q ss_pred hhhhccccC-CCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 012629 267 VFLWTPALS-PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (459)
Q Consensus 267 ~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (459)
...|.+.|+ ++..|.++ +.......++.+++++..+++.||+++|+ .+..+..+....+.+..+.. .
T Consensus 277 ~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~--~l~~~~~~~~~~~~~~~~~~-~------ 347 (438)
T PRK10133 277 CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK--VLAAYALIAMALCLISAFAG-G------ 347 (438)
T ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHHHHcC-C------
Confidence 345677774 55566655 66778888999999999999999999887 24444333333322222111 1
Q ss_pred CCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhh
Q 012629 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (459)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (459)
......+.+.+++.+..+|..++...|..|++ .+++.++
T Consensus 348 ---------~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l 386 (438)
T PRK10133 348 ---------HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSF 386 (438)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhH
Confidence 12345677889999999999999999998875 3444443
No 35
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=2.9e-26 Score=226.19 Aligned_cols=350 Identities=14% Similarity=0.074 Sum_probs=205.6
Q ss_pred CccchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHH
Q 012629 33 SAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY 108 (459)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~ 108 (459)
+..++.+|..+..+++..+.+.++ .+.+|.+.+++|+++.+.+++.+...+...+++++.|+++||+|||+++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 91 (496)
T PRK03893 12 RHLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVIS 91 (496)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 333455666555555555544444 7778888999999999999998888888888889999999999999999999
Q ss_pred HHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhh
Q 012629 109 CLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGL 184 (459)
Q Consensus 109 ~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 184 (459)
.++.+++. +.++++|++.+++.|++.|++.+...+.... ++.|. ++|++..+ ....+..+|..+++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~--------~~~~~~~~g~~~~~~ 162 (496)
T PRK03893 92 IVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSAT-YVIESWPKHLRNKASG--------FLISGFSIGAVVAAQ 162 (496)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCHHHHHHHHH--------HHHHHHHHHHHHHHH
Confidence 98888876 6688899999999999999999988888766 77776 33333222 222344566667777
Q ss_pred hhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCC--chhhHHHHHHhh----hHHh---------------
Q 012629 185 FGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS--ESKDLLTQFRGA----AVAI--------------- 243 (459)
Q Consensus 185 l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~--------------- 243 (459)
+.+.+.++ ++||..|.+..+..++. +......||+++.++ +.++..++..+. .+..
T Consensus 163 ~~~~l~~~--~~w~~~f~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (496)
T PRK03893 163 VYSLVVPV--WGWRALFFIGILPIIFA-LWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWF 239 (496)
T ss_pred HHHHHhcc--CCHHHHHHHHHHHHHHH-HHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 77766654 45667676644433332 222334555322110 000000000000 0000
Q ss_pred -c------------------------------chhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHH
Q 012629 244 -A------------------------------SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFAT 289 (459)
Q Consensus 244 -~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 289 (459)
. +++..........+...........+.|.|+++..+.+. +...+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~ 319 (496)
T PRK03893 240 CFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFF 319 (496)
T ss_pred HHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 0 000000000000000000000134577888865566644 677778
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchh
Q 012629 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (459)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (459)
..++.++++++.|++.||++||+. +..+..+..+........... . .+.......+.+.......
T Consensus 320 ~~~~~~~g~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~ 384 (496)
T PRK03893 320 SGFGAAVGCCVGGFLGDWLGTRKA--YVCSLLISQLLIIPVFAIGGA---------N----VWVLGLLLFFQQMLGQGIS 384 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHH--HHHHHHHHHHHHHHHhhcccc---------H----HHHHHHHHHHHHHHhcccc
Confidence 888899999999999999998872 333333222222211111111 0 0122222222222222234
Q ss_pred hHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCc
Q 012629 370 PSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDA 409 (459)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~ 409 (459)
+....+++|.+|++.|++++|+.+.. .++.+++.+.+..+
T Consensus 385 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g 430 (496)
T PRK03893 385 GLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD 430 (496)
T ss_pred hhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC
Confidence 66778899999999999998876652 34455555555533
No 36
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.95 E-value=5.4e-26 Score=216.13 Aligned_cols=355 Identities=17% Similarity=0.145 Sum_probs=218.6
Q ss_pred HHHHHHHHHhhhhccchhhhh-hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHH-HHHHHHHHH-HHh
Q 012629 43 LLVYSLMMAGDWLQGPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT-YCLTYILSC-ITK 119 (459)
Q Consensus 43 ~~~~~~~~~~~~~~~p~l~~~-~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~-~~~~~~~~~-l~~ 119 (459)
+...++..++.+...|.+|.. .+++|.|++++|++.+...+.+.+.+++.|+++||+||||.++. +.....++. +.+
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 344566666777778888864 57899999999999998888888999999999999999987665 444445554 668
Q ss_pred hCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccc
Q 012629 120 HSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (459)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~ 198 (459)
+++|++.+++.|+++|.+.+...|...+ +..|. +++++.... .......+..+|..+++.+++.+.+. ++||
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~ig~~~~~~l~~~--~~~~ 155 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFA-LAREHADRTGREAVM----FSSVMRAQISLAWVIGPPLAFWLALG--FGFT 155 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHH-HHHHHhhhcchhhHH----HHHHHHHHHhHHHHHhhhHHHHHHHh--cccH
Confidence 8999999999999999887777777655 66666 333332211 11122223446666677777766644 4667
Q ss_pred cchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCc
Q 012629 199 APFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (459)
Q Consensus 199 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (459)
..|++.+...++..+...+..||.+++++++++ +.+.++..++++.+.......+...... ....+.|.+.++.
T Consensus 156 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 229 (375)
T TIGR00899 156 VMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT-----RLEVRGLLASRDTRLLFVACTLMWGCNI-LYIINMPLLIIHE 229 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCcccccC-----cchhhhhhcCcchHHHHHHHHHHHHHHH-HHHhhhHHHHHHH
Confidence 888888777666665555556764433222111 1122234555655544333333322222 2345667777655
Q ss_pred cCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHH
Q 012629 279 EEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQL 355 (459)
Q Consensus 279 ~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (459)
.+.+. +..........+++.++.+++.||++||+. +........+........... +...
T Consensus 230 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~~ 292 (375)
T TIGR00899 230 LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRL--MLLAALAGVAFYTGLAADNSL---------------WALL 292 (375)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHHHHH---------------HHHH
Confidence 55544 444455555677788999999999998872 333333222222221111111 2344
Q ss_pred HHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHHHHHHH
Q 012629 356 LGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVL 429 (459)
Q Consensus 356 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (459)
....+.+++.+...+....+.+|..|++ ++++.++.+.. .++.+++.+.+. .++...+...++..+.+.+.
T Consensus 293 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~--~g~~~~~~~~~~~~~~~~~~ 369 (375)
T TIGR00899 293 MLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAER--WSYHAVYWFAIVMLIVALFC 369 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccchhHHHHHHHHHHHHHHH
Confidence 5566677777877788888999998875 55777776652 233444444443 24555555555555544444
Q ss_pred H
Q 012629 430 Q 430 (459)
Q Consensus 430 ~ 430 (459)
.
T Consensus 370 ~ 370 (375)
T TIGR00899 370 L 370 (375)
T ss_pred H
Confidence 3
No 37
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.95 E-value=4.5e-26 Score=223.51 Aligned_cols=329 Identities=15% Similarity=0.032 Sum_probs=224.2
Q ss_pred HHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHH
Q 012629 40 NNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (459)
Q Consensus 40 ~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~ 115 (459)
|..+....+..+...+| ...+|.+.+|+|.+.++.+++.+...+......+++|+++||+|||+++..+..++.++
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~ 84 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 44444445555544444 67788999999999999999988887777788889999999999999999999999997
Q ss_pred H-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhh-hhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 012629 116 C-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLV-AEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (459)
Q Consensus 116 ~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i-~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~ 190 (459)
. ++++++|++.++++|+++|++.+...+.... .+ .+. ++|++..+ .......+|..++|.+++.+.
T Consensus 85 ~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~-~l~~~~~~~~~r~~~~g--------~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 85 SLAAAFSPTASWLIATRALLAIGAAMIVPATLA-GIRATFTEEKQRNMALG--------VWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhh
Confidence 6 7789999999999999999999998887655 44 332 33444333 222244567777778888877
Q ss_pred cccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHH----------------------------------
Q 012629 191 DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQF---------------------------------- 236 (459)
Q Consensus 191 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 236 (459)
++. +||+.|++...+.++..++.....|+++++++++.+.....
T Consensus 156 ~~~--gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (495)
T PRK14995 156 EHF--YWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGA 233 (495)
T ss_pred ccC--ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHH
Confidence 655 45677888877777766666656676543322211110000
Q ss_pred -------Hhh--------hHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHH
Q 012629 237 -------RGA--------AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGS 298 (459)
Q Consensus 237 -------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 298 (459)
..+ ..+++|+|.+........+.....+. ...+.|.|+++..+.++ +.......++..++.
T Consensus 234 ~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~ 312 (495)
T PRK14995 234 LLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVG-FELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSG 312 (495)
T ss_pred HHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000 01345555555544444444444444 46678888887666654 677777888899999
Q ss_pred HHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhc
Q 012629 299 SLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQ 378 (459)
Q Consensus 299 ~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 378 (459)
++.|++.||+|+|+ .+..+..+..+........... .+. +......++.|++.+...+.....+.+
T Consensus 313 ~~~g~l~~r~g~~~--~~~~g~~~~~~~~~~l~~~~~~--------~~~----~~~~~~~~l~G~g~g~~~~~~~~~~~~ 378 (495)
T PRK14995 313 PIAGILVSRLGLRL--VATGGMALSALSFYGLAMTDFS--------TQQ----WQAWGLMALLGFSAASALLASTSAIMA 378 (495)
T ss_pred HHHHHHHHHcCchH--HHHHHHHHHHHHHHHHHHhcCC--------Cch----HHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 99999999999876 3444444443333332222111 111 234556788899999888888889999
Q ss_pred cCChhhhhhhhhhhhh
Q 012629 379 YIPEEARSTIMNFFRI 394 (459)
Q Consensus 379 ~~p~~~r~~~~g~~~~ 394 (459)
..|++.++.+.++.++
T Consensus 379 ~~~~~~~g~~~~~~~~ 394 (495)
T PRK14995 379 AAPPEKAAAAGAIETM 394 (495)
T ss_pred cCCHHhcchHHHHHHH
Confidence 9999999999888776
No 38
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=2.2e-25 Score=218.89 Aligned_cols=337 Identities=14% Similarity=0.104 Sum_probs=198.7
Q ss_pred chhhHHHHHHHHHHHHhhhhc----cchhhhhhhcc--------CCCccchhhHHHHHHHHhhhhhccccchhcccCcch
Q 012629 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTY--------GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR 103 (459)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~--------~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~ 103 (459)
.+++.+...++.+..+.++++ .+..|.+.+++ +.++++.+++.+...+...++++++|+++||+|||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~ 86 (479)
T PRK10077 7 SSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRD 86 (479)
T ss_pred chHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 345566666666666666666 55556666655 888899999999988888899999999999999999
Q ss_pred hhHHHHHHHHHHH-HHhhC---------Cc---hHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHH
Q 012629 104 ACVTYCLTYILSC-ITKHS---------PQ---YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITF 167 (459)
Q Consensus 104 ~~~~~~~~~~~~~-l~~~~---------~~---~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~ 167 (459)
+++.+.++++++. .++++ ++ ++.+++.|+++|++.|...+...+ +++|+ ++|++..+. .
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~-~i~e~~~~~~rg~~~~~----~ 161 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPM-YIAEIAPAHIRGKLVSF----N 161 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHH-HHHhhCChhhhhHHHHH----H
Confidence 9999999988765 44442 22 457889999999999999999866 88888 345554443 3
Q ss_pred HHHHHHHHHHHHHHhhhhhh----hcccccCCccccchhhHHHHHHHHHHHHHhhccccCCC---CCchhh---HHH---
Q 012629 168 SKAIFLGNGLVAILSGLFGN----LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD---PSESKD---LLT--- 234 (459)
Q Consensus 168 ~~~~~~g~~~g~~~~~~l~~----~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~---~~~--- 234 (459)
+.+..+|..+++.++..+.. ... ..++||++|++.++..++..+.. ..+||+++. +++.++ ..+
T Consensus 162 ~~~~~~G~~~~~~~~~~~~~~~~~~~~--~~~gWr~~f~~~~~~~~~~~~~~-~~l~~s~~~l~~~~~~~~~~~~~~~~~ 238 (479)
T PRK10077 162 QFAIIFGQLVVYFVNYFIARSGDASWL--NTDGWRYMFASEAIPALLFLMLL-YFVPETPRYLMSRGKQEQAEGILRKIM 238 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhccCccccc--ccCChHHHHHHHHHHHHHHHHHH-HcCCCCcHHHHHcCCHHHHHHHHHHHc
Confidence 33333333333333322211 111 24678888988777666654443 467775421 111110 000
Q ss_pred ------HHHhhhHHhcc-----hhHHHHH---HHH-----HHhhhhhhhhhhhhhccccCCCccCCc---hhHHHHHHHH
Q 012629 235 ------QFRGAAVAIAS-----DEKIALL---GAI-----QSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFML 292 (459)
Q Consensus 235 ------~~~~~~~~~~~-----~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 292 (459)
+..++.++..+ .++.+.. ... ..+.+...+....++.|.+.++ .+.+ ........++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~ 317 (479)
T PRK10077 239 GNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGV 317 (479)
T ss_pred CChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHH
Confidence 00001111111 1111100 000 0111111111234455665443 3332 2344455677
Q ss_pred HHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchh-hH
Q 012629 293 ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW-PS 371 (459)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~-~~ 371 (459)
..+++.++.+++.||+|||+ .+..+..+..+............ . .. .......++++.+.+... |.
T Consensus 318 ~~~i~~~~~g~l~dr~g~r~--~~i~~~~~~~v~~~~l~~~~~~~-------~-~~---~~~~~~~~~~~~~~~~~~~~~ 384 (479)
T PRK10077 318 INLTFTVLAIMTVDKFGRKP--LQIIGALGMAIGMFSLGTAFYTQ-------A-PG---IVALLSMLFYVAAFAMSWGPV 384 (479)
T ss_pred HHHHHHHHHHHHHHHhcChH--HHHHhHHHHHHHHHHHHHHHhcC-------c-cc---HHHHHHHHHHHHHHhccccch
Confidence 88899999999999999887 34444444444443333222110 0 00 123334555555555433 77
Q ss_pred HHHHHhccCChhhhhhhhhhhhh
Q 012629 372 IMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 372 ~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.+.+++|.+|++.|+++.|+.+.
T Consensus 385 ~~~~~~e~~p~~~r~~~~g~~~~ 407 (479)
T PRK10077 385 CWVLLSEIFPNAIRGKALAIAVA 407 (479)
T ss_pred hHHHhHhhCChhHHHHHHHHHHH
Confidence 89999999999999999988765
No 39
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=4.1e-26 Score=223.43 Aligned_cols=320 Identities=13% Similarity=0.077 Sum_probs=210.3
Q ss_pred hhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHH
Q 012629 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIG 130 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~ 130 (459)
......+.+|.+.+++|.++.+.+++.+...+...++.+++|+++||+|||+++..+..+.+++. +++++++++.+++.
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLA 104 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 33444788899999999999999988887777777888899999999999999999988888875 56788999999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHH
Q 012629 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (459)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i 210 (459)
|+++|++.+...+.... ++.|..+++++.. ..+ ....+..+|..+++.+++.+.++. +||+.|.+...+..+
T Consensus 105 ~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~-~~~~~~~~g~~~g~~~~g~l~~~~--gw~~~f~~~~~~~~l 176 (471)
T PRK10504 105 RVLQGVGGAMMVPVGRL-TVMKIVPREQYMA----AMT-FVTLPGQVGPLLGPALGGLLVEYA--SWHWIFLINIPVGII 176 (471)
T ss_pred HHHHHhhhHHHHHHHHH-HHHHHcCHHHHHH----HHH-HHHHHHHHHHHhhhHHHHHHHhhc--cHHHHHHHHHHHHHH
Confidence 99999999999888755 7777643333322 111 222334466677777777776544 567778877766665
Q ss_pred HHHHHHhhccccCCCCCchhhH---------------------------------------------HHHHH-h--hhHH
Q 012629 211 GMVIILSSWTENYGDPSESKDL---------------------------------------------LTQFR-G--AAVA 242 (459)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~-~--~~~~ 242 (459)
..+......|+.+.++++.+.. .++.. + ...+
T Consensus 177 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (471)
T PRK10504 177 GAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLK 256 (471)
T ss_pred HHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHH
Confidence 5555544444432211110000 00000 0 0113
Q ss_pred hcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHH
Q 012629 243 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (459)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~ 319 (459)
++|||++........+.... +.....+.|.|.+...+.+. +.......++.+++.++.+++.||+|+|+ .+..+
T Consensus 257 l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~--~~~~~ 333 (471)
T PRK10504 257 LFRTRTFSLGLAGSFAGRIG-SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRR--VLVAT 333 (471)
T ss_pred HhcccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH--HHHHH
Confidence 56677766655444444444 33345677888776556544 55666666778888899999999999887 24444
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 320 FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
..+..+........... + + .+.......+.|++.+...+..+....+..|++.++++.|+.++
T Consensus 334 ~~~~~~~~~~~~~~~~~--------~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 396 (471)
T PRK10504 334 TLGLALVSLLFMLVALL--------G-W---YYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSM 396 (471)
T ss_pred HHHHHHHHHHHHhcccc--------c-c---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHH
Confidence 44344333332221111 0 0 01233445666778887888888999999999999999888776
No 40
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=2.2e-25 Score=212.65 Aligned_cols=365 Identities=16% Similarity=0.174 Sum_probs=216.0
Q ss_pred CccchhhHHHHHHHHHHHHhhhhccchhhhh-hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhH-HHHH
Q 012629 33 SAFNSFKNNYLLVYSLMMAGDWLQGPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV-TYCL 110 (459)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~-~~~~ 110 (459)
+.++...+.++...++..++..+..|.+|.. .+|+|.|++++|.+.+.....+.+.+++.|.++||+||||.++ .+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~ 90 (393)
T PRK15011 11 KSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCL 90 (393)
T ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 3444555667777777777877778887764 5789999999999877766667777776655599999998754 4455
Q ss_pred HHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012629 111 TYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (459)
Q Consensus 111 ~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (459)
..+++. +.+++++++.+++.+.+.|...+...|.... +..|+ ++|++.... ++.....+..+|.+++|.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~lg~~~g~~i~~~ 165 (393)
T PRK15011 91 LGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFA-LAREHADKTGREAVM----FSSFLRAQVSLAWVIGPPLAYA 165 (393)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHhhhccchHHH----HHHHHHHHHHHHHHHhhHHHHH
Confidence 555554 5578899988776665555444566666645 66665 444443322 2223333455677777777777
Q ss_pred cccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhH-HHHHHHHHHhhhhhhhhhh
Q 012629 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK-IALLGAIQSLFEGSMYTFV 267 (459)
Q Consensus 189 l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 267 (459)
+.++. +||..|+..++..++..+......||.++++++.++.. + ...++++ .+............ +...
T Consensus 166 l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (393)
T PRK15011 166 LAMGF--SFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGTL----E---APRRNRRDTLLLFVICTLMWGT-NSLY 235 (393)
T ss_pred HHHhc--ChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccccc----c---ccccccccHHHHHHHHHHHHHH-HHHH
Confidence 76544 66788888877776666555556676543322211110 1 1122222 22222222222222 3334
Q ss_pred hhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
..+.|.|.++..+.+. +.......+..+++.++.|+++||++||+. +....................
T Consensus 236 ~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~-------- 305 (393)
T PRK15011 236 IINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFL--MRVAAVAGVCFYAGMLMAHSP-------- 305 (393)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH--HHHHHHHHHHHHHHHHHHhhH--------
Confidence 5678888877666654 455555556778889999999999998872 333322222222111111111
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHH
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGM 418 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~ 418 (459)
+..+....+.+++.+...+....+.+|..|++ |+++.++.+.. .++.+++.+.+. .++...+..
T Consensus 306 -------~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~--~g~~~~~~~ 375 (393)
T PRK15011 306 -------AILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEI--WNYHAVFWF 375 (393)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHH
Confidence 23344445555566666666677888998865 88887765542 334455555554 345555555
Q ss_pred HHHHHHHHHHHHhh
Q 012629 419 CSIFLLVASVLQRR 432 (459)
Q Consensus 419 ~~~~~~~~~~~~~~ 432 (459)
..+..++..+....
T Consensus 376 ~~~~~~~~~~~~~~ 389 (393)
T PRK15011 376 ALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHh
Confidence 55555555444443
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=1.9e-25 Score=212.40 Aligned_cols=349 Identities=13% Similarity=0.112 Sum_probs=209.5
Q ss_pred hHHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-H
Q 012629 39 KNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I 117 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l 117 (459)
.+.++...++..+..+...|++|.+.+++|.|..++|++.+...+...++.++.|+++||+|||+.+..+.++.+++. .
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444445566666899999999999999999999999998888999999999999999999999999998876 5
Q ss_pred HhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC
Q 012629 118 TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (459)
Q Consensus 118 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (459)
+++++|++.+++.|+++|++.+...+...+ .+.+. ++|++..+ .... +..+|..+++.+++.+.+...
T Consensus 88 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~----~~~~g~~~g~~~~~~l~~~~~ 158 (381)
T PRK03633 88 LGLMVGFWSWLAWRFVAGIGCAMIWVVVES-ALMCSGTSRNRGRLLA----AYMM----VYYLGTVLGQLLVSKVSTELM 158 (381)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCHHHHHHHHH----HHHH----HHHHHHHHHHHHHhccccccc
Confidence 688999999999999999999998887655 43333 33444333 2222 334555555566555543221
Q ss_pred CccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 195 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
|...+.. .............+.+++++++ + + .++.++.+++|+++........ ....+.....+.|.|
T Consensus 159 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lp~~ 226 (381)
T PRK03633 159 --SVLPWVT-GLVLAAILPLLFTRILNQQAEN-H-D------STSIWPMLKLRQARLGVNGCII-SGIVLGSLYGLMPLY 226 (381)
T ss_pred --chHHHHH-HHHHHHHHHHHHhcccCCCCCC-C-C------CCCHHHHHHhcchHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 1222222 2211111112221223221111 1 0 0122234556665543222222 221222234567877
Q ss_pred CCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccc
Q 012629 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (459)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (459)
.++. +.+. +...+...++.++++...+++.||+++|+ .+..+.....+...... ...
T Consensus 227 ~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~--~l~~~~~~~~~~~~~~~--~~~--------------- 286 (381)
T PRK03633 227 LNHQ-GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL--VLRVQVFVVILGSIAML--SQA--------------- 286 (381)
T ss_pred HHHc-CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH--HHHHHHHHHHHHHHHHh--hhH---------------
Confidence 7653 4433 56667777889999999999999999886 24333333333322211 111
Q ss_pred hhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh------hhhHHHHHhhhccCcchhHHHHHHHHHHHHH
Q 012629 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI------PLNIFVCVVLYNVDAFPITVMFGMCSIFLLV 425 (459)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 425 (459)
.......+.+.+.....|...+.+.|..|++.++...+..+. ..++.+++.+.+.. ++...+...+...++
T Consensus 287 -~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~--g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 287 -AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY--SDNLLFIMIASVSFI 363 (381)
T ss_pred -HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHH
Confidence 223344555665556678899999999998876665544322 24455556665543 344455555444444
Q ss_pred HHHHHh
Q 012629 426 ASVLQR 431 (459)
Q Consensus 426 ~~~~~~ 431 (459)
......
T Consensus 364 ~~~~~~ 369 (381)
T PRK03633 364 YLLMLL 369 (381)
T ss_pred HHHHHH
Confidence 444333
No 42
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.95 E-value=1.1e-25 Score=215.46 Aligned_cols=345 Identities=15% Similarity=0.073 Sum_probs=219.5
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
.+..|.+.+++|.++.+.|++.+...+...++.++.|+++||+|||+++..+.++.+++. +.++++|++.+++.|+++|
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 93 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG 93 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 555678889999999999999999998888999999999999999999999999888875 6688899999999999999
Q ss_pred hHhhhhhhhhhhhhhhhcc---ccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~---~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
++.+...+.... ++.|+. +|++..+. ...+..+|..+++.+++.+.+.. +||..|...+++.++..
T Consensus 94 ~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~--------~~~~~~~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 94 AAEAPFFPGIIL-IVASWFPASERATAVSI--------FNSAQGLGGIIGGPLVGWILIHF--SWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHhhhhHHHH-HHHHhCCHHHHHHHHHH--------HHHhchHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHH
Confidence 999999888766 888873 33443332 22234466666666666665544 46677877776666555
Q ss_pred HHHHhhccccCCCCCchhhHHH-----H-------------HHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 213 VIILSSWTENYGDPSESKDLLT-----Q-------------FRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
+......||++++++..++..+ + ..+..++.+++|+++.......+....... ...+.|.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 241 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGF-FLTWFPTY 241 (399)
T ss_pred HHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHH-HHHHHHHH
Confidence 5444344443322111000000 0 011234567778877776666655555444 57788888
Q ss_pred CCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHH--HHHHHHHhhhccCCCCCCCCCccc
Q 012629 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSV--SLLLPIVTSFLVAPSNVKSGGISF 349 (459)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 349 (459)
.++..+.+. +.......++.+++.++.+++.||++||+............. ............ +.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--- 311 (399)
T TIGR00893 242 LVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYV-------NI--- 311 (399)
T ss_pred HHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccc-------hh---
Confidence 877666543 566777788899999999999999998862111111111111 111111111110 00
Q ss_pred cchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHH
Q 012629 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFL 423 (459)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 423 (459)
.+.......+.+.+.+ ..+...++.+|..|++.|+++.|+.+.. .++.+.+.+.+..+ .+...+...++..
T Consensus 312 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g-~~~~~~~~~~~~~ 388 (399)
T TIGR00893 312 -PYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG-SFAGALMVVAALA 388 (399)
T ss_pred -HHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC-chhHHHHHHHHHH
Confidence 0122222233333333 6788999999999999999999887763 22233344444422 1444454444444
Q ss_pred HHH
Q 012629 424 LVA 426 (459)
Q Consensus 424 ~~~ 426 (459)
++.
T Consensus 389 ~~~ 391 (399)
T TIGR00893 389 LIG 391 (399)
T ss_pred HHH
Confidence 433
No 43
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.95 E-value=2.6e-25 Score=212.30 Aligned_cols=333 Identities=16% Similarity=0.125 Sum_probs=213.6
Q ss_pred HHHHHHHHHHHHhhhhccchhhhh-hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-H
Q 012629 40 NNYLLVYSLMMAGDWLQGPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I 117 (459)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~p~l~~~-~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l 117 (459)
+..+...++...+.....|+++.. .+++|.|+.++|.+.+...+...+.+++.|+++||+|||+++..+..+.+++. .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 455555666666777777887754 57899999999999998888888888999999999999999999999999876 5
Q ss_pred HhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC
Q 012629 118 TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (459)
Q Consensus 118 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (459)
+.++++++.+++.|+++|++.+...+...+ ++.|. ++|++..+.. ... ..+|..++|.+++.+. .
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~----~~~----~~~g~~ig~~l~g~l~---~ 160 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLGGTLFDPPRTA-LVIKLIRPHQRGRFFSLL----MMQ----DSAGAVIGALLGSWLL---Q 160 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCHHHHHHHHHHH----HHH----HHHHHHHHHHHHHHHH---H
Confidence 578899999999999999999888887756 66665 3444444422 222 3345555555555554 2
Q ss_pred CccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 195 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
++|+..|++.+...++..+......||.+++++ . ++.++..+..+++|+++............... ...+.|.|
T Consensus 161 ~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~ 234 (400)
T PRK11646 161 YDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV-R----TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQ-VMLMLPIM 234 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCccccccc-c----hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHH-HHHhhhhh
Confidence 467788888777666554444434555322111 1 11233455667788776554443333222222 35578888
Q ss_pred CCCccCCch--hHHHHHHHHHHHHHHHHHHHHhhc-CCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccc
Q 012629 275 SPNDEEIPH--GFIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (459)
Q Consensus 275 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (459)
.++..+.+. +...+...+....+....+++.|| ++.++ .+..+..+..+...........
T Consensus 235 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~~~~~~~~l~~~~~~--------------- 297 (400)
T PRK11646 235 VNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH--RLMAGLLIMSLSMFPIGMVSNL--------------- 297 (400)
T ss_pred HHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHHhhhH---------------
Confidence 776544332 555555565555555555666654 54343 2334443333333332222211
Q ss_pred hhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhcc
Q 012629 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNV 407 (459)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~ 407 (459)
+...+...+.+.+.+...|...++..|..|++.|++++|+.+.. .++.+++.+.+.
T Consensus 298 ~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 298 QQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 23344556677777777788899999999999999999888763 333444555444
No 44
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=5.6e-25 Score=209.43 Aligned_cols=324 Identities=14% Similarity=0.036 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH
Q 012629 40 NNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT 118 (459)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~ 118 (459)
+.+....++..+++......++...+|++.++.+.+++.+...+...++.+++|+++||+||||+++.+..+.+++. .+
T Consensus 6 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~ 85 (393)
T PRK11195 6 YAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM 85 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH
Confidence 44555566666666655444456678999999999999888888888999999999999999999999999998865 44
Q ss_pred hhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccc
Q 012629 119 KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (459)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~ 198 (459)
+++++. ++.|+++|++.+...|...+ ++.|..+++++..... ..+ ....++.++||.+++.+.+ +.|+
T Consensus 86 ~~~~~~---~~~r~l~G~~~a~~~pa~~a-~i~~~~~~~~~~~a~~-~~~----~~~~~~~~~Gp~lgG~l~~---~~~~ 153 (393)
T PRK11195 86 LFGIHP---LLAYGLVGIGAAAYSPAKYG-ILTELLPGEKLVKANG-WME----GSTIAAILLGTVLGGALAD---PHAE 153 (393)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHcCHHHHHHHHH-HHH----HHHHHHHHHHHHHHHHHHH---HHHH
Confidence 555553 78899999999999999877 8888733333322111 122 2344555666666666654 2356
Q ss_pred cchhhHHHHHHHHHHHHHhhccccCCCCCch----hhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 199 APFDAAACFLAIGMVIILSSWTENYGDPSES----KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 199 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
..+.+.+...++..+ .....||+++++++. .+..++..+..+.++++|..........+....... .....|.+
T Consensus 154 ~~~~i~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 231 (393)
T PRK11195 154 AALAVCALIYLLAAL-FNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGAT-LRFLVLAW 231 (393)
T ss_pred HHHHHHHHHHHHHHH-HHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 666655544443332 233566643222111 111233334455667777655443333333222222 23344455
Q ss_pred CCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccc
Q 012629 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (459)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (459)
.++.+|.++ |.......++.+++++..+++.||.++|+ .+..+. ..+............
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~--~~~~g~-~~~~~~~~~~~~~~~--------------- 293 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR--VLPAGI-LMGLVVLLMALQHSL--------------- 293 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--hHHHHH-HHHHHHHHHHHHhHH---------------
Confidence 554455543 67778888899999999999999988776 233332 222222222111111
Q ss_pred hhHHHHHHHHHhhhcchhhHHHHHHhccCChhh-hhhhhhhhhhh
Q 012629 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA-RSTIMNFFRIP 395 (459)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~-r~~~~g~~~~~ 395 (459)
+.......+.|++.+...+..++..+|..|++. +|++.++.++.
T Consensus 294 ~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~ 338 (393)
T PRK11195 294 LPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFN 338 (393)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHH
Confidence 234556667788888877778888888876665 78888777763
No 45
>PRK03699 putative transporter; Provisional
Probab=99.95 E-value=1.9e-25 Score=213.23 Aligned_cols=302 Identities=13% Similarity=0.084 Sum_probs=192.0
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
++.+|.+.+++|+|.++.+++.+...+...++.++.|++.||+|||+++..+.++.+++. ++++++|++.+++.|+++|
T Consensus 27 g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G 106 (394)
T PRK03699 27 GMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLG 106 (394)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHH
Confidence 778889999999999999999888888788888899999999999999999998888875 6688999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~ 215 (459)
++.+...+...+ ++.|..+++++..... .. ..+..+|..++|.+.+.+... .++||.+|...+++.++..++.
T Consensus 107 ~~~g~~~~~~~~-~i~~~~~~~~r~~~~~-~~----~~~~~~g~~~~~~~~~~l~~~-~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 107 VVSGITMSIGTF-LITHVYEGKQRGSRLL-FT----DSFFSMAGMIFPIIAAYLLAR-SIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred HhhHhhccchhH-HhhhhcccchHHHHHH-HH----HHHHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHH
Confidence 999988877655 6777632222221111 11 122334555555655554321 3567888887776665544433
Q ss_pred Hh-hccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHH
Q 012629 216 LS-SWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFM 291 (459)
Q Consensus 216 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 291 (459)
+. ..|+.++++++++ ++..+. ..+++++...+...+.....+. ...|.|.|.++..+.+. +...+...
T Consensus 180 ~~~~~p~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~~~~~~~~~~~~ 251 (394)
T PRK03699 180 LFSEFPALGKHAPKAD------KPVAKE-KWGIGVLFLAIAALLYILAQLT-FISWVPEYAQKKFGMSLEDAGNLVSNFW 251 (394)
T ss_pred HhcCCccccccCcccc------Cccccc-cCChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCChHHhhHHHHHHH
Confidence 32 2232111111100 000111 1234555554444444444444 57799999977666654 56667777
Q ss_pred HHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhH
Q 012629 292 LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPS 371 (459)
Q Consensus 292 ~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 371 (459)
++..+++++.++++||+++|+. +.....+..+......... . . +...+..++.|++.+..++.
T Consensus 252 ~~~~ig~~~~g~l~dr~~~~~~--l~~~~~~~~~~~~~~~~~~-~----------~----~~~~~~~~~~G~~~~~~~~~ 314 (394)
T PRK03699 252 MAYMVGMWIFSFIVRFFDLQRI--LTVLAGLALVLMYLFVNTD-D----------P----SHLLYAILGLGFFSSAIYTT 314 (394)
T ss_pred HHHHHHHHHHHHHHHHhchhhH--HHHHHHHHHHHHHHHHHcC-C----------c----hHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998872 3333332222222211111 1 0 13344566677777777777
Q ss_pred HHHHHhccCChhhhhhhhhh
Q 012629 372 IMKMRSQYIPEEARSTIMNF 391 (459)
Q Consensus 372 ~~~~~~~~~p~~~r~~~~g~ 391 (459)
..+...|..|++ +++..+.
T Consensus 315 ~~~~~~~~~~~~-~~~~~g~ 333 (394)
T PRK03699 315 IITLGSQQTKVA-SPKLVNF 333 (394)
T ss_pred HHHHHHHHccCC-CHHHHHH
Confidence 777888877644 3444443
No 46
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=1.3e-26 Score=218.41 Aligned_cols=330 Identities=22% Similarity=0.291 Sum_probs=220.7
Q ss_pred HHHHHHHHhhhhccchhh-hhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhC
Q 012629 44 LVYSLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS 121 (459)
Q Consensus 44 ~~~~~~~~~~~~~~p~l~-~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~ 121 (459)
...++..+......|.+| .+.+++|.++.+++++.+...+...+++++.|+++||+|||+++..+.++.+++. +..++
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 344555556666688888 7889999999999999999999899999999999999999999999999999884 44566
Q ss_pred CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccch
Q 012629 122 PQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 201 (459)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f 201 (459)
+|++.+++.|++.|++.+...+...+ ++.|+.+++++.... + ....+..+|..+++.+++.+.++. +||..|
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~-~i~~~~~~~~~~~~~----~-~~~~~~~~g~~~g~~l~~~l~~~~--~~~~~~ 154 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNA-LIADWFPPEERGRAF----G-ILSAGFSLGSILGPLLGGFLISYF--GWRWAF 154 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCTCCHHHHH----H-HHHHHHHHHHHHHHHHHHHCCCHC--HHCCHH
T ss_pred hhHHHHhhhccccccccccccccccc-cccccchhhhhhhcc----c-cccchhhhhhhcccchhhhhhhcc--cccccc
Confidence 88889999999999999999999877 888873333322211 1 223345566677777777766444 567778
Q ss_pred hhHHHHHHHHHHHHHhhccccCCCCCc---hhh---HHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccC
Q 012629 202 DAAACFLAIGMVIILSSWTENYGDPSE---SKD---LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (459)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (459)
++.+++.++..++.....+++++++++ .++ ..++..+..+.+++++.++.............. ....+.|.|.
T Consensus 155 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l 233 (352)
T PF07690_consen 155 LISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFS-GFSFFLPLYL 233 (352)
T ss_dssp HHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHHHC
T ss_pred ccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHH-Hhhcccchhh
Confidence 888888887766433333333222211 111 111111125566666666522222222222333 3577888887
Q ss_pred CCccCCc-h---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccc
Q 012629 276 PNDEEIP-H---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (459)
Q Consensus 276 ~~~~~~~-~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (459)
++..+.+ . +.......+..+++.++.+++.||+++|+. .........+............+ .
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------------~ 299 (352)
T PF07690_consen 234 QEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRR--LLIAILLLILGALGLLLLPFSSS------------P 299 (352)
T ss_dssp CHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH--HHHHHHHHHHHHHHHCCSHHHCH------------H
T ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH--HHHHHHHHHHHHHHHHHHHHhhh------------H
Confidence 7777666 3 455677778888889999999999987663 22222222222222222211100 0
Q ss_pred hhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhh
Q 012629 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (459)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (459)
........+.|++.+...+...++..|..|++.++++.|+.+...
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 344 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIG 344 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 244556777888888889999999999999999999999988643
No 47
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=2.4e-25 Score=217.45 Aligned_cols=378 Identities=11% Similarity=0.001 Sum_probs=229.2
Q ss_pred cchhhHHHHHHHHHHHHhhhhc----cchhhhhhh----------------------ccCCCccchhhHHHHHHHHhhhh
Q 012629 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYS----------------------TYGFGKGEIGQLFIAGFGSSMLF 88 (459)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~----------------------~~~~s~~~~g~~~~~~~~~~~l~ 88 (459)
+.+.|+.+..+.++....+..+ +...+.+.+ |++++..+.|.+.+..+....++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 4555666666666655555555 222233333 78999999999999988888899
Q ss_pred hccccchhcccCcchhhHHHHHHHHHHH-HH--hhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHH
Q 012629 89 GTIVGSLADKQGRKRACVTYCLTYILSC-IT--KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSI 165 (459)
Q Consensus 89 ~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~--~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~ 165 (459)
+++.|+++||+|||+++..+.++.+++. ++ +..++++.+++.|+++|++.+...+.... ++.|+.++.++..
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~-~~~~~~~~~~r~~---- 167 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHK-IIVKWAPPKERSR---- 167 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHH-HHHhcCCHHHHHH----
Confidence 9999999999999999999998888764 43 33467888999999999999999998866 8888744333332
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCc-hhhHHHHH--------
Q 012629 166 TFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSE-SKDLLTQF-------- 236 (459)
Q Consensus 166 ~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~-------- 236 (459)
.......+..+|..+++.+.+.+.+.. .+||.+|++.+++.++..++.+...+|+++++++ .+++.+..
T Consensus 168 -~~~~~~~~~~~g~~i~~~l~~~l~~~~-~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~ 245 (465)
T TIGR00894 168 -LLGMSTSGFQLGTFIFLPISGWLCESW-GGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQK 245 (465)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhccccc
Confidence 122333355667777777777766532 2667888888777666554444334433221111 11111000
Q ss_pred -----HhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcC
Q 012629 237 -----RGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARS 308 (459)
Q Consensus 237 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~ 308 (459)
+..++++++++.++...+.........+. ..+|.|.|+++..+.+. +...+...++.+++.++.|+++||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~ 324 (465)
T TIGR00894 246 GSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTI-LPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL 324 (465)
T ss_pred CCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11355677888888877777666666554 57899999987666644 6677777888999999999999987
Q ss_pred CCCcchhHH----HHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh
Q 012629 309 PPRVESYMQ----IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (459)
Q Consensus 309 g~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~ 384 (459)
++|+..... ..............+...... .+ .+..+..+.+.+.+.+...+.......|..|+ .
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~ 393 (465)
T TIGR00894 325 KSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLS------AA----FYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F 393 (465)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcC------Cc----hHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H
Confidence 654321110 111111111111111111100 00 01333444555555554555566666777766 7
Q ss_pred hhhhhhhhhhhh--hHHHHHhh----hccCc-chhHHHHHHHHHHHHHHHHHHh
Q 012629 385 RSTIMNFFRIPL--NIFVCVVL----YNVDA-FPITVMFGMCSIFLLVASVLQR 431 (459)
Q Consensus 385 r~~~~g~~~~~~--~~~~~~~l----~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 431 (459)
+|.+.|+.++.. +..++..+ .+.+. ..+...+.+.++..++..++..
T Consensus 394 ~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 394 LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 888888887742 22222222 22211 2355566666555555544443
No 48
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.95 E-value=5.4e-25 Score=209.19 Aligned_cols=349 Identities=13% Similarity=0.073 Sum_probs=230.5
Q ss_pred HHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHH-H-HH-HH
Q 012629 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI-L-SC-IT 118 (459)
Q Consensus 42 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~-~-~~-l~ 118 (459)
+...++....+.++..|++|.+.+|+|.|.+++|.+.+.......+.++++|+++||+|||+.......... + .. ..
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 444555566667788999999999999999999999999998889999999999999998554322222111 1 12 33
Q ss_pred hhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCcc
Q 012629 119 KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGP 197 (459)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w 197 (459)
..+++++.+++.|.++|.+.+...|...+ +..++ ++|++..+..+. +..+|.+++|.+++.+.++. +|
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~a-l~~~~~~~~~~~~g~~~~--------~~slG~~~g~~l~g~l~~~~--g~ 157 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDA-LANTWQKQFGLDYGKVRL--------IGSAAFIIGSALFGGLIGMF--DE 157 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHH-HHHHHHHHcCCCccHHHH--------HHHHHHHHHHHHHHHHHHHc--Ch
Confidence 56789999999999999998888888766 65555 555555553322 33366677777777777554 55
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCC
Q 012629 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (459)
Q Consensus 198 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (459)
|..|.+......+.. ......|+.+++++++++. ++..++.++++|+|+++.......+.+..... ...+.|.|.++
T Consensus 158 ~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~-~~~~~~~~l~~ 234 (382)
T TIGR00902 158 QNILAILTAGLAFML-IGFLIKPTIPPKDAIPEDE-SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAA-YYGFSAIYWQA 234 (382)
T ss_pred hHHHHHHHHHHHHHH-HHHHcCCCCCCCccccccc-cccchhHHHHHcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 666766554433222 2222223211211111111 11122355778899988887777666666554 46677888765
Q ss_pred ccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhH
Q 012629 278 DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (459)
Q Consensus 278 ~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (459)
.|.+. +..+....++.+++..+.+++.||+++|+ .+..+.....+........... +..
T Consensus 235 -~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~--~l~~~~~~~~~~~~~~~~~~~~---------------~~~ 296 (382)
T TIGR00902 235 -AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD--LLLISAIACVGRWAIIGAIEAF---------------PLI 296 (382)
T ss_pred -CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH--HHHHHHHHHHHHHHHHHhHhhH---------------HHH
Confidence 55554 66777777889999999999999999877 3555555555444443332222 356
Q ss_pred HHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh-h------hhHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q 012629 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI-P------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVA 426 (459)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 426 (459)
+...++.++.++...+....++++. |++.|+++.++.+. . .+..+++.+.+.. +. ..+..+++..+.+
T Consensus 297 ~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~--g~-~~~~~~~~~~~~~ 371 (382)
T TIGR00902 297 FLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL--GA-GTFVFMAIIAAAA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cH-HHHHHHHHHHHHH
Confidence 6678999999999999999999998 99999988887653 1 3456667776664 33 3344444444443
No 49
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=7.3e-25 Score=209.44 Aligned_cols=278 Identities=14% Similarity=0.096 Sum_probs=182.1
Q ss_pred hhhHHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH
Q 012629 37 SFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (459)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~ 116 (459)
|+-............+.....+.+|.+.+++|.++++.++..+.......++.++.|+++||+|||+.+..+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIAS 82 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHH
Confidence 44444444444444555555788999999999999999998888887777888999999999999999999998888876
Q ss_pred -HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCC
Q 012629 117 -ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (459)
Q Consensus 117 -l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~ 195 (459)
+...++|++.+++.|+++|++.+...+...+ ++.|..+++++..... ..+ ....++..++|.+++.+.+. +
T Consensus 83 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~-~i~~~~~~~~r~~~~~-~~~----~~~~i~~~~~~~i~~~l~~~--~ 154 (392)
T PRK10473 83 LLCSLAETSSLFLAGRFLQGIGAGCCYVVAFA-ILRDTLDDRRRAKVLS-LLN----GITCIIPVLAPVLGHLIMLK--F 154 (392)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHH-HHHHHcCHHHHHHHHH-HHH----HHHHHHHHHHHHHHHHHHhC--c
Confidence 5678899999999999999999988877755 7777632222222111 112 12335555666666665543 4
Q ss_pred ccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccC
Q 012629 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (459)
Q Consensus 196 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (459)
+|+..|++.+.+..+...+.....||++++++++++ +..+..++.+++++++.......+....... ...+.|.+.
T Consensus 155 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 230 (392)
T PRK10473 155 PWQSLFYTMAAMGILVLLLSLFILKETRPARAPAAS---SKPRENSESLLNRFFLSRLVITTLSVTVILT-FVNTSPVLL 230 (392)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCcc---chHHHHHHHHhCHHHHHHHHHHHHHHHHHHH-HHHhCHHHH
Confidence 567778777776666555555456665433222111 1122333556677766544443333333232 344566666
Q ss_pred CCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHH
Q 012629 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL 328 (459)
Q Consensus 276 ~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~ 328 (459)
++..+.+. +.......++.+++.++.+++.||+|+|+ .+..+.....+...
T Consensus 231 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~--~~~~~~~~~~~~~~ 284 (392)
T PRK10473 231 MEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRT--LMLTSQVLFLAAGI 284 (392)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHHHHHH
Confidence 65556544 55667777889999999999999999876 24444443333333
No 50
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=3.8e-25 Score=217.66 Aligned_cols=344 Identities=11% Similarity=-0.029 Sum_probs=200.3
Q ss_pred CCCccchhhHHHHHHHHHHHHhhhhc----cchhhhhhhc-----cCCCccchhhHHHHHHHHhhhhhccccchhcccCc
Q 012629 31 TSSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYST-----YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR 101 (459)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~-----~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Gr 101 (459)
++.++.++++..+.++.+..+.++++ +...|.+.++ .+.+..+.+++.+...+...++.+++|+++||+||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Gr 85 (502)
T TIGR00887 6 DTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGR 85 (502)
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45677788888888888888888887 4444444432 23445566778787878788888899999999999
Q ss_pred chhhHHHHHHHHHHH-HHhhCCc------hHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHH
Q 012629 102 KRACVTYCLTYILSC-ITKHSPQ------YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAI 171 (459)
Q Consensus 102 r~~~~~~~~~~~~~~-l~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~ 171 (459)
|+++..+.++..++. +++++++ ++.+++.|+++|++.|...+.... ++.|. ++|++..+... ...
T Consensus 86 r~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~-~~~e~~p~~~Rg~~~~~~~----~~~ 160 (502)
T TIGR00887 86 KRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAI-ITSEFATKKWRGAMMAAVF----AMQ 160 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhcChhhHHHHHHHHH----HHH
Confidence 999999999998875 5566665 678999999999999999998866 88988 44455444333 233
Q ss_pred HHHHHHHHHHhhhhhhhccc-----------------ccCCccccchhhHHHHHHHHHHHHHhhccccCC------CCCc
Q 012629 172 FLGNGLVAILSGLFGNLLVD-----------------SFSLGPVAPFDAAACFLAIGMVIILSSWTENYG------DPSE 228 (459)
Q Consensus 172 ~~g~~~g~~~~~~l~~~l~~-----------------~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~------~~~~ 228 (459)
.+|..+|+.++..+.....+ ..+|+||.+|.+.++..++..+.. +..||+++ ++++
T Consensus 161 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~-~~lpESpr~l~~~~~~~~ 239 (502)
T TIGR00887 161 GFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFR-LTIPETPRYTADVAKDVE 239 (502)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHH-HhCCCCHHHHHHhCcchH
Confidence 33444444444333221110 124689999977766665544443 46787532 2111
Q ss_pred -hhhHHHH----------------------HHhhhHHhcch---hHHHHH----HHHHHhhhhhhhhhhhhhccccCCCc
Q 012629 229 -SKDLLTQ----------------------FRGAAVAIASD---EKIALL----GAIQSLFEGSMYTFVFLWTPALSPND 278 (459)
Q Consensus 229 -~~~~~~~----------------------~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (459)
.++..++ .+..+++++++ ++.+.. ....+......|. ...|.|.++++
T Consensus 240 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~~~p~i~~~- 317 (502)
T TIGR00887 240 QAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYG-VNLNQKVILSA- 317 (502)
T ss_pred HHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHc-cccccHHHHHH-
Confidence 1100000 00123334332 121111 1111222222233 45667776643
Q ss_pred cCCch---hH------------HHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 012629 279 EEIPH---GF------------IFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (459)
Q Consensus 279 ~~~~~---~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (459)
.|.+. +. ......++.+++.++.+++.||+|||+. +..+..+.++.+.+........
T Consensus 318 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~--l~~~~~~~~~~~~~l~~~~~~~------ 389 (502)
T TIGR00887 318 IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPI--QLMGFFILTVLFFVLGFAYNHL------ 389 (502)
T ss_pred HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhH--HHHHHHHHHHHHHHHHHHHHhc------
Confidence 23221 10 1223345677788999999999999883 4444444444443333222110
Q ss_pred CCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
+.. ...........+......+..+.+.+|.+|++.|+++.|+.+..
T Consensus 390 -~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~ 436 (502)
T TIGR00887 390 -STH----GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAAS 436 (502)
T ss_pred -chh----HHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHH
Confidence 000 01111111111222224467788899999999999999987763
No 51
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=1.3e-24 Score=207.86 Aligned_cols=318 Identities=13% Similarity=0.071 Sum_probs=204.6
Q ss_pred HHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHH
Q 012629 49 MMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKIL 127 (459)
Q Consensus 49 ~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l 127 (459)
..+......|.+|.+.+++|.|+.+.+++.+...+...++++++|+++||+|||+.+..+..+..++. +..++++++.+
T Consensus 20 ~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 99 (394)
T PRK11652 20 GQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVL 99 (394)
T ss_pred HHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 33455555888899999999999999999898888888899999999999999999999998888875 56788999999
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHH
Q 012629 128 MIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (459)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~ 207 (459)
++.|++.|++.+...+.... +..|..++.+... .......+..++..++|.+++.+.++ ++||..|++.++.
T Consensus 100 ~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~i~~~l~~~--~g~~~~f~~~~~~ 171 (394)
T PRK11652 100 IAASAIQGLGTGVGGVMART-LPRDLYEGTQLRH-----ANSLLNMGILVSPLLAPLIGGLLTTL--FGWRACYLFLLLL 171 (394)
T ss_pred HHHHHHHHhhhhHHHHHHHH-HHHHhcCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhc--cChHHHHHHHHHH
Confidence 99999999998877666544 6666522222211 11123345556666777777766643 4567778877666
Q ss_pred HHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---h
Q 012629 208 LAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---G 284 (459)
Q Consensus 208 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 284 (459)
.++.........||+++++++++ +.++..++.+++|+++............... ...+.+.+.++..+.+. +
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 246 (394)
T PRK11652 172 GAGVTFSMARWMPETRPADARRT----RVLASYRTLLSNRRFNCYLLMLIGTLAGIAV-FEACSGVLMGAVLGLSSMTVS 246 (394)
T ss_pred HHHHHHHHHHhCCccCccccchh----HHHHHHHHHHcChHHHHHHHHHHHHHHHHHH-HHHhChHHHHHHcCCCHHHHH
Confidence 65544444445666543322211 1344556677787766544333333222222 24455666666556554 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhh
Q 012629 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (459)
Q Consensus 285 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 364 (459)
.......++.+++..+.+++.||.+++. ...................... . ..+.......+.+++
T Consensus 247 ~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~g 312 (394)
T PRK11652 247 ILFILPIPAAFFGAWFAGRPNKRFSTLM----WQSVICCLLAGLLMWIPGWFGV------M----NVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcc------c----cHHHHHHHHHHHHHH
Confidence 5555566777888888888888886322 2221211111111111111100 0 013455667778888
Q ss_pred hcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 365 VGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 365 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.+...|...++..|..|+ .++++.++.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 341 (394)
T PRK11652 313 AGMLFPLATSGAMEPFPY-LAGTAGALLGG 341 (394)
T ss_pred HHHHHHHHHHHHHhhccc-cchHHHHHHHH
Confidence 888889999999999874 67887777664
No 52
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=1.1e-24 Score=208.67 Aligned_cols=368 Identities=12% Similarity=0.132 Sum_probs=218.1
Q ss_pred CccchhhHHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHH
Q 012629 33 SAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (459)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~ 112 (459)
..++|-........++...+.+...++++.+.+|+|.|+++.|++.+...+...++.++.|+++||+||||++..+..+.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~ 88 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLW 88 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 34444445555566666777777777777888999999999999988888888899999999999999999999999988
Q ss_pred HHHH-HH---hh-CCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHH-HHhh
Q 012629 113 ILSC-IT---KH-SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVA-ILSG 183 (459)
Q Consensus 113 ~~~~-l~---~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~-~~~~ 183 (459)
+++. ++ +. .++++.+++.|+++|++.+...+.... .+.+. ++|++..+.... +..+|. .+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~--------~~~~g~~~~g~ 159 (402)
T TIGR00897 89 CVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLV-WVVYNTKQDNLSSAVGWFWA--------VYSIGIGVFGS 159 (402)
T ss_pred HHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHH-HHHHhCCHHHHHHHHHHHHH--------HHHHHHHHHHH
Confidence 8764 32 23 357888899999999998877666544 44443 455555543322 233443 3455
Q ss_pred hhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCC-CCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhh
Q 012629 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD-PSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGS 262 (459)
Q Consensus 184 ~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (459)
.+++.+.+..+| +..++.......+...+.....++.+++ +++++++.++..+..+.++++|+++...+...+....
T Consensus 160 ~~~~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (402)
T TIGR00897 160 YYSSYAIPAFGE--MNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIG 237 (402)
T ss_pred HHHHhcccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 666666554443 2223322222222222222222322111 1111111222233455678889888776665555555
Q ss_pred hhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCC
Q 012629 263 MYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAP 339 (459)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 339 (459)
.+. ...+.|.|.++ .+.+. +.......++.+++++..|+++||++||+. ..........+.............
T Consensus 238 ~~~-~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-~~~~~~l~~~~~~~~l~~~~~~~~- 313 (402)
T TIGR00897 238 LFG-FAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT-VRWFGGVGCGIFTLALYYIPQHFG- 313 (402)
T ss_pred HHH-HHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-HHHHHHHHHHHHHHHHHHHHHccC-
Confidence 554 47788988765 55544 455566778899999999999999998772 111122222222222211111100
Q ss_pred CCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhH
Q 012629 340 SNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPIT 413 (459)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~ 413 (459)
++ .+...+..++.|++.+...+ ......|..| ++|+++.|+.+.. .++.+++.+.+. .++.
T Consensus 314 -----~~----~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~--~g~~ 380 (402)
T TIGR00897 314 -----HS----FAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF--FGAI 380 (402)
T ss_pred -----Cc----HHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cchH
Confidence 00 12344556666776665444 3455667655 5799999987773 334444555554 3444
Q ss_pred HHHHHHHHHHHHHHH
Q 012629 414 VMFGMCSIFLLVASV 428 (459)
Q Consensus 414 ~~~~~~~~~~~~~~~ 428 (459)
..+..+++..++...
T Consensus 381 ~~~~~~a~~~~i~~~ 395 (402)
T TIGR00897 381 GVVWIFAALYVVSAF 395 (402)
T ss_pred HHHHHHHHHHHHHHH
Confidence 555555444444333
No 53
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.94 E-value=8.9e-25 Score=206.39 Aligned_cols=300 Identities=13% Similarity=0.029 Sum_probs=193.5
Q ss_pred cchhhhhhh-ccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhC-----CchHHHHH
Q 012629 57 GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-----PQYKILMI 129 (459)
Q Consensus 57 ~p~l~~~~~-~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~-----~~~~~l~~ 129 (459)
+|..+.+.+ |+|+|++|.+++.++..+.+.+..++.|++.||+|.|+++..+.++.++.+ ..+++ +|++.+++
T Consensus 54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli 133 (462)
T PRK15034 54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIV 133 (462)
T ss_pred HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHH
Confidence 777777765 899999999999998888888888899999999999999999999988875 55665 89999999
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhh-cccccC-----------
Q 012629 130 GRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL-LVDSFS----------- 194 (459)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-l~~~~~----------- 194 (459)
.|++.|++ +..++.... .++++ ++|++..+... ...+.|..++..+.|.+... +....+
T Consensus 134 ~r~l~Gig-g~~f~~~~~-~vs~wfp~~~rG~A~Gi~~----g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~ 207 (462)
T PRK15034 134 IALLCGFA-GANFASSMG-NISFFFPKAKQGSALGING----GLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSV 207 (462)
T ss_pred HHHHHHHH-HHhHHHHHH-HHHHHCCHhHhHHHHHHHH----HHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccch
Confidence 99999998 666677656 77776 44566555332 23444555666666554321 111111
Q ss_pred CccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 195 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
.+||..+.+..++.++..++.++..++.+++ +.+ .++....+|+|+.|.+++.+.+....+.. ...+.|.|
T Consensus 208 ~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~---~~~-----~~~~~~vlk~~~~Wllslly~~tFG~fvg-~s~~lp~~ 278 (462)
T PRK15034 208 MSLANAAWIWVPLLAIATIAAWSGMNDIASS---RAS-----IADQLPVLQRLHLWLLSLLYLATFGSFIG-FSAGFAML 278 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccc---ccC-----HHHHHHHhCCCchhHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 2355555555555555554554443332211 111 12334578899999999888877777665 47789998
Q ss_pred CCCccCCchh-HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchh
Q 012629 275 SPNDEEIPHG-FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (459)
Q Consensus 275 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (459)
.++.++.... .......+...+.++++|+++||+|+++ ++........+........... .+ ....+.
T Consensus 279 ~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~--vl~~~~i~~~i~~~~~~l~lp~-------~~--~~~~~~ 347 (462)
T PRK15034 279 AKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR--VTLINFIFMAIFSALLFLTLPG-------TG--SGNFIA 347 (462)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH--HHHHHHHHHHHHHHHHHHHhcc-------cc--ccHHHH
Confidence 8776543222 2233445778888999999999999887 3444444333332221111111 00 001124
Q ss_pred HHHHHHHHHhhhcchhhHHHHHHhccCCh
Q 012629 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPE 382 (459)
Q Consensus 354 ~~~~~~l~g~~~~~~~~~~~~~~~~~~p~ 382 (459)
....++...++.|..+...+-++.+.+|+
T Consensus 348 ~~~~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 348 FYAVFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred HHHHHHHHHHHhcccchHHHHhhHHHHhh
Confidence 44444445566676777777777777764
No 54
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=6.7e-25 Score=209.05 Aligned_cols=355 Identities=14% Similarity=0.072 Sum_probs=224.2
Q ss_pred hhhHHHHHHHHHHHHhhhhccchhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHH
Q 012629 37 SFKNNYLLVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (459)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~ 115 (459)
|-.+.++...++...+.+...|++|... +++|++..++|++.+...+.+.+.+++.|+++||+|||+++..+.+..+++
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~ 86 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASG 86 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH
Confidence 3345566666666777777788877554 689999999999999988888889999999999999999999999888887
Q ss_pred H-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhccc
Q 012629 116 C-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (459)
Q Consensus 116 ~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~ 191 (459)
. +.+++++++.+++.|.+.|.+.+...+...+ +..|. ++|++..+. ... ...+|..++|.+++.+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~----~~~----~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 87 FIAIPLVNNVTLVVLFFALINCAYSVFSTVLKA-WFADNLSSTSKTKIFSL----NYT----MLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCHhHHHHHHHH----HHH----HHHHHHHHHHHHHHHHHH
Confidence 6 5688999999999999998887777776655 66655 223333222 222 233555666666666543
Q ss_pred ccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhc
Q 012629 192 SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT 271 (459)
Q Consensus 192 ~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (459)
.+|+.+|...+++.++..+......|+++++++++++ + ..+.++.+++|+++.......+....... ...+.
T Consensus 158 ---~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~ 229 (395)
T PRK10054 158 ---QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATETG--S--VWSPSVLLQDKALLWFTCSGFLASFVSGA-FASCI 229 (395)
T ss_pred ---hccCcHHHHHHHHHHHHHHHHHHHHhccccccccchh--h--hhhhhhhccCceehHHHHHHHHHHHHHHH-hhhhH
Confidence 3567888887777666655544445554332221111 1 11224667788877766555544433222 22233
Q ss_pred cccCC--CccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 012629 272 PALSP--NDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (459)
Q Consensus 272 ~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (459)
+.+.. ++.+.+. +.......+.........+++.||.++|+ .+..+..+..+...........
T Consensus 230 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~---------- 297 (395)
T PRK10054 230 SQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP--LMTAGTLCFVIGLVGFIFSGNS---------- 297 (395)
T ss_pred HHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchh--HHHHHHHHHHHHHHHHHHcchH----------
Confidence 34332 1223222 45555555666666788899999998876 2444443344333333221111
Q ss_pred ccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh-----hhhHHHHHhhhccCcchhHHHHHHHHH
Q 012629 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI-----PLNIFVCVVLYNVDAFPITVMFGMCSI 421 (459)
Q Consensus 347 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (459)
.+...+...+.+++.+...|...+.+.+..|++.|++..+..+. ..++..++.+.+.. +....+.+.++
T Consensus 298 ----~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~~Gp~~~G~l~~~~--g~~~~~~~~~~ 371 (395)
T PRK10054 298 ----LLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVILTTL--PPWSLFVILAL 371 (395)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHHHHHHHHHHHHHHHHHHHHHc--ChhhHHHHHHH
Confidence 02345567788888887778888999999999999988775443 24556666666653 44445544433
Q ss_pred HHHHH
Q 012629 422 FLLVA 426 (459)
Q Consensus 422 ~~~~~ 426 (459)
...++
T Consensus 372 ~~~~~ 376 (395)
T PRK10054 372 AIVAA 376 (395)
T ss_pred HHHHH
Confidence 33333
No 55
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=2.8e-24 Score=206.05 Aligned_cols=315 Identities=14% Similarity=0.131 Sum_probs=205.1
Q ss_pred HhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHH
Q 012629 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMI 129 (459)
Q Consensus 51 ~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~ 129 (459)
+...+..|.+|.+.+++|.++++.++..+.......++++++|+++||+|||+.+..+..+..++. +++++++++.+++
T Consensus 20 ~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 99 (401)
T PRK11043 20 LATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLV 99 (401)
T ss_pred HHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 344455888888899999999999999999888888999999999999999999999998888875 6688899999999
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHH
Q 012629 130 GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (459)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~ 209 (459)
.|+++|++.+...+...+ ++.|..++++..+.... ......++..++|.+++.+.++. +||..|+..+.+.+
T Consensus 100 ~~~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~i~~~l~~~~--g~~~~~~~~~~~~~ 171 (401)
T PRK11043 100 LRFVQAVGVCSAAVIWQA-LVIDRYPAQKANRVFAT-----IMPLVALSPALAPLLGAWLLNHF--GWQAIFATLFAITL 171 (401)
T ss_pred HHHHHHhhhHHHHHHHHH-HHHHhcCcHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHH
Confidence 999999998887776655 67776434333332211 11233456666677777766544 56777877776666
Q ss_pred HHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHH
Q 012629 210 IGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFI 286 (459)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 286 (459)
+...... ..+|+++++++ + +.+.+.++.+++|+.+...+.........+. ...+.|.+.++ .+.+. +..
T Consensus 172 ~~~~~~~-~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~-~g~s~~~~g~~ 243 (401)
T PRK11043 172 LLILPTL-RLKPSKKARKQ-S----QDALTFKQLLKSKTYLGNVLIFAACSAAFFA-WLTGSPFILEQ-MGYSPADIGLS 243 (401)
T ss_pred HHHHHHH-HcCCCCCcccc-c----hHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HHHHhHHHHHH-cCCCHHHHHHH
Confidence 5544443 34443322211 1 1123455667777776554444443333333 35567777654 45544 455
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhc
Q 012629 287 FATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVG 366 (459)
Q Consensus 287 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 366 (459)
.....++.+++....+++.||+++|+. .........+............ .++. +...+...+.+++.+
T Consensus 244 ~~~~~~~~~~g~~~~~~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~~~~~~~~ 311 (401)
T PRK11043 244 YVPQTIAFLVGGYGCRAALQKWGGEQL--LPWLLVLFAVSVIAIWLASLLS------HPSL----VPLLIPFCVMAAANG 311 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHHHHHhc------cCcH----HHHHHHHHHHHHHHH
Confidence 555667788899999999999987762 2222222222222211111110 0011 234455667788888
Q ss_pred chhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 367 IFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 367 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
..++...+...|..|+ .++++.|+.+.
T Consensus 312 ~~~~~~~~~~~~~~~~-~~g~~~g~~~~ 338 (401)
T PRK11043 312 AIYPIVVAQALRPFPQ-ATGKAAALQNT 338 (401)
T ss_pred HHHHHHHHHHhhhCcc-cChHHHHHHHH
Confidence 8888888888887764 68988888776
No 56
>TIGR00895 2A0115 benzoate transport.
Probab=99.94 E-value=8e-25 Score=209.76 Aligned_cols=330 Identities=20% Similarity=0.220 Sum_probs=210.6
Q ss_pred chhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHH
Q 012629 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (459)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (459)
+++++..+..++...+.++++ .+..|.+.+++|.++.+.+++.+.......++.++.|+++||+|||+.+..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 344555555555555544333 6677888899999999999998888888888899999999999999999999988
Q ss_pred HHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012629 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (459)
Q Consensus 112 ~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (459)
..++. +..++++++.+++.|++.|++.+...+...+ ++.|. ++|++..+. . ..+..+|..+++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~----~----~~~~~~g~~~~~~~~~ 162 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNA-LVSEYAPKRFRGTAVGL----M----FCGYPIGAAVGGFLAG 162 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHH-HHHHHcCHHhhchhHhh----H----hhHHHHHHHHHHHHHH
Confidence 88875 5678899999999999999999998888766 77776 334444442 2 2234455566666666
Q ss_pred hcccccCCccccchhhHHHHHHHHHHHHHhhccccCCC---C-Cch-h----------------------hHHHHHHhhh
Q 012629 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD---P-SES-K----------------------DLLTQFRGAA 240 (459)
Q Consensus 188 ~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~---~-~~~-~----------------------~~~~~~~~~~ 240 (459)
.+.+. ++|+..|.+.+.+..+.........||+++. + +++ + +..++.++..
T Consensus 163 ~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398)
T TIGR00895 163 WLIPV--FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVF 240 (398)
T ss_pred HHhhc--ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHH
Confidence 66544 3566777776555554444444455553211 0 000 0 0000001111
Q ss_pred HHhcch---hHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcch
Q 012629 241 VAIASD---EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVES 314 (459)
Q Consensus 241 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 314 (459)
+..+++ ++.+.......+.... +.....+.|.+.+ ..+.+. +.......++.+++.++.+++.||+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 316 (398)
T TIGR00895 241 KALFQGKTARITVLLWLLYFMLLVG-VYFLTNWLPKLMV-ELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV-- 316 (398)
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH--
Confidence 112222 2222222233333333 2234667774443 334433 56677778889999999999999999874
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 315 YMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 315 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.........+........... .+......++.+++.+...+..+++.+|.+|++.|+++.|+.+.
T Consensus 317 -~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 381 (398)
T TIGR00895 317 -TALLLLLGAVFAVLVGSTLFS--------------PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIG 381 (398)
T ss_pred -HHHHHHHHHHHHHHHHHHhhC--------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Confidence 333333333322222221111 02455667788888888889999999999999999999988776
Q ss_pred h
Q 012629 395 P 395 (459)
Q Consensus 395 ~ 395 (459)
.
T Consensus 382 ~ 382 (398)
T TIGR00895 382 I 382 (398)
T ss_pred H
Confidence 3
No 57
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.94 E-value=4.7e-25 Score=217.09 Aligned_cols=320 Identities=15% Similarity=0.130 Sum_probs=219.9
Q ss_pred HhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHH
Q 012629 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMI 129 (459)
Q Consensus 51 ~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~ 129 (459)
+......+.+|.+.+++|.+.++.+++.+...+...++.++.|+++||+|||+++..+.++..++. ++++++|++.+++
T Consensus 16 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 95 (485)
T TIGR00711 16 LDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMII 95 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHH
Confidence 344445788899999999999999999898888888889999999999999999999999999876 6688999999999
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhcc---ccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHH
Q 012629 130 GRILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (459)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~~---~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~ 206 (459)
.|+++|++.+...+...+ ++.|.. +|++..+ ....+..+|..+++.+++++.++ ++||+.|++.+.
T Consensus 96 ~~~~~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~--------~~~~~~~~g~~~g~~~~~~l~~~--~~w~~~f~~~~~ 164 (485)
T TIGR00711 96 FRVIQGFGGGPLIPLSFS-TLLNIYPPEKRGRAMA--------IWGLTVLVAPALGPTLGGWIIEN--YHWRWIFLINVP 164 (485)
T ss_pred HHHHHHhhhhhHHHHHHH-HHHHHCCHHHHHHHHH--------HHHHHHHHHhhhhhccHhHhccC--cCceehhhhhhH
Confidence 999999999999888866 777773 3333222 22334556777777888877764 456677887776
Q ss_pred HHHHHHHHHHhhccccCCCCCchhhHH----------------------------------------------HHHH--h
Q 012629 207 FLAIGMVIILSSWTENYGDPSESKDLL----------------------------------------------TQFR--G 238 (459)
Q Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~--~ 238 (459)
+.++.........||++++++++.+.. ++.+ +
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (485)
T TIGR00711 165 IGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDN 244 (485)
T ss_pred HHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 666655555545555433221111100 0000 0
Q ss_pred --hhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 012629 239 --AAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVE 313 (459)
Q Consensus 239 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 313 (459)
...+.+++|+++.......+.....+. ...+.|.|.++..+.+. +.......++.+++.++.|++.||++||+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~- 322 (485)
T TIGR00711 245 PLVDLRLFKYRNFTIGCVYMSLLGLGLYG-SFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRK- 322 (485)
T ss_pred CccCHHHHcCCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHH-
Confidence 001245566666655555555555444 46778888887666654 66777778889999999999999999876
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhh
Q 012629 314 SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (459)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (459)
.+..+..+..+........... ..+ .+.......+.|++.+...+.......+..|++.++++.|+.+
T Consensus 323 -~~~~g~~~~~~~~~~~~~~~~~-------~~~----~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 390 (485)
T TIGR00711 323 -LVTIGLILYAVGFYWRAFTFTP-------DTP----FLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSN 390 (485)
T ss_pred -HHHHHHHHHHHHHHHHhccCCC-------CCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHH
Confidence 2444444333333332211111 001 1234555778888888888777788888899999999998877
Q ss_pred hh
Q 012629 394 IP 395 (459)
Q Consensus 394 ~~ 395 (459)
+.
T Consensus 391 ~~ 392 (485)
T TIGR00711 391 FT 392 (485)
T ss_pred HH
Confidence 63
No 58
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=9.8e-25 Score=215.63 Aligned_cols=309 Identities=13% Similarity=0.034 Sum_probs=201.3
Q ss_pred chhhhhhhccCCC---ccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHH
Q 012629 58 PYVYYLYSTYGFG---KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (459)
Q Consensus 58 p~l~~~~~~~~~s---~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l 133 (459)
+..+.+.+|+|++ ..+.+++.+..++...+++++.|+++||+|||+++.++.++.+++. +.++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 6677888999998 8889999999888888999999999999999999999999888875 66899999999999999
Q ss_pred HHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHH
Q 012629 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (459)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~ 213 (459)
.|++.+...+.... ++.|..++.++.. .......+..+|.++++.++..+. +||..|++.++..++..+
T Consensus 190 ~G~~~~~~~~~~~~-~~~e~~~~~~r~~-----~~~~~~~~~~~g~~~~~~~~~~~~-----~wr~~~~~~~i~~~~~~~ 258 (505)
T TIGR00898 190 VGMGIGGIWVQAVV-LNTEFLPKKQRAI-----VGTLIQVFFSLGLVLLPLVAYFIP-----DWRWLQLAVSLPTFLFFL 258 (505)
T ss_pred HHhhccchHHHHHH-HhheecChhhhHH-----HHHHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHH
Confidence 99999998888866 8888733333222 111223345566666666665543 267778877776665554
Q ss_pred HHHhhccccCC------CCCchhhHHH--------------------H----H--HhhhHHhcchhHHHHHHHHHHhhhh
Q 012629 214 IILSSWTENYG------DPSESKDLLT--------------------Q----F--RGAAVAIASDEKIALLGAIQSLFEG 261 (459)
Q Consensus 214 ~~~~~~~~~~~------~~~~~~~~~~--------------------~----~--~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (459)
.. ...||+++ +.+++++..+ + . +...++++++|+++...+...+...
T Consensus 259 ~~-~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 337 (505)
T TIGR00898 259 LS-WFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWF 337 (505)
T ss_pred HH-HhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence 44 35666432 1111111000 0 0 0133456667766655444333322
Q ss_pred hhhhhhhhhccccCCCccCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCC
Q 012629 262 SMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSN 341 (459)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (459)
.... .++...+.....+.+........++..+++.++.+++.||+|||+ .+.....+.++.++........
T Consensus 338 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~--~~~~~~~~~~~~~l~~~~~~~~----- 408 (505)
T TIGR00898 338 TTAF--SYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRY--TMAASLLLAGVALLLLLFVPVD----- 408 (505)
T ss_pred HHHH--HHHHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHcCCC-----
Confidence 2111 112222222233444445555667788899999999999999887 2444444444443333222111
Q ss_pred CCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 342 VKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
. .+......++.+++.+..++..+.+.+|.+|++.|+++.|+.+..
T Consensus 409 ----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 454 (505)
T TIGR00898 409 ----L----YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTM 454 (505)
T ss_pred ----c----hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHH
Confidence 0 023344455556666777788899999999999999999887763
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=2.4e-24 Score=208.51 Aligned_cols=334 Identities=12% Similarity=0.071 Sum_probs=197.3
Q ss_pred chhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHH
Q 012629 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (459)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (459)
++.++..+..+.+.......+ ....|.+.+ .|+++++.+++.+...+...++.++.|+++||+|||+.+..+.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~ 100 (438)
T TIGR00712 22 KRLRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHH
Confidence 334455555554544444433 333445554 699999999999999888889999999999999999999999888
Q ss_pred HHHHH-HHhhC----CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhh
Q 012629 112 YILSC-ITKHS----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (459)
Q Consensus 112 ~~~~~-l~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~ 183 (459)
.+++. +.+.. ++++.+.+.|++.|++.+...+.... .+.|+ ++|+...+. .+. +..+|..+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~-~i~~~~~~~~rg~~~~~----~~~----~~~~g~~~~~ 171 (438)
T TIGR00712 101 SAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGR-TMVHWWSQSERGTIVSI----WNC----AHNIGGGIPP 171 (438)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHH-HHHHhcCcccchhHHHH----HHH----HHHhHhHHHH
Confidence 88875 44443 56778889999999999988877655 66666 334444432 222 2334444444
Q ss_pred hhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCC---C-c---h-------hhHHH--HHHhh-hHHhcch
Q 012629 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---S-E---S-------KDLLT--QFRGA-AVAIASD 246 (459)
Q Consensus 184 ~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~---~-~---~-------~~~~~--~~~~~-~~~~~~~ 246 (459)
.+.+...+. ..+||..|++.+++.++..+......||++++. + + . ++..+ +.++. .+..+++
T Consensus 172 ~l~~~~~~~-~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (438)
T TIGR00712 172 LLVLLGMAW-FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPN 250 (438)
T ss_pred HHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccC
Confidence 443332221 136778888877776665544444455432110 0 0 0 00000 00111 1235777
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHH
Q 012629 247 EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS 323 (459)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~ 323 (459)
+.++.......+.....+. ...|.|.|+++..+.+. +.......+.+++++++.+++.||+++++.. . .+....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-~-~~~~~~ 327 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYG-VLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG-A-TGVFFM 327 (438)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-H-HHHHHH
Confidence 8887776665555555454 46789999987666544 5666777788999999999999999654421 2 222111
Q ss_pred HHHHH-HHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 324 SVSLL-LPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 324 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
..... ...+.... ..+. +......+..+.+.............|.+|++.|+++.|+.+.
T Consensus 328 ~~~~~~~~~~~~~~-------~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 388 (438)
T TIGR00712 328 TLVTIAVIVYWMNP-------AGNP----LVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGL 388 (438)
T ss_pred HHHHHHHHHHHhcC-------CCch----HHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhch
Confidence 11111 11111111 0000 1222233333333222222334567899999999999988765
No 60
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=9.7e-25 Score=196.40 Aligned_cols=361 Identities=19% Similarity=0.146 Sum_probs=238.7
Q ss_pred HHHHHhhhhc-cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCc-
Q 012629 47 SLMMAGDWLQ-GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQ- 123 (459)
Q Consensus 47 ~~~~~~~~~~-~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~- 123 (459)
+...+..++. .|+.+.+.+|+|+|++|.+++.....+.+.+..++.|.+.||+|.|++..++.++..+-+ ..+++.+
T Consensus 23 f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~ 102 (417)
T COG2223 23 FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY 102 (417)
T ss_pred HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC
Confidence 3333333333 777778889999999999999999999999999999999999999999999999988864 4466544
Q ss_pred --hHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCC-cc
Q 012629 124 --YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL-GP 197 (459)
Q Consensus 124 --~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~-~w 197 (459)
++.+++.+++.|++.+.. .+..+ .++++ +++|...+ .++ ..++|.++...++|.+... .++ .|
T Consensus 103 ~~~~~ll~~gll~G~~GasF-av~m~-~~s~~fP~~~qG~AlG----I~g-~GN~G~av~q~~~P~v~~~----~g~~~w 171 (417)
T COG2223 103 PSTWQLLVIGLLLGLAGASF-AVGMP-NASFFFPKEKQGLALG----IAG-AGNLGVAVAQLVAPLVAVA----FGFLAW 171 (417)
T ss_pred CchHHHHHHHHHHhccccee-hcccc-cccccCChhhhhHHHH----Hhc-cccccHHHHHHHHHHHHHH----HhhHHH
Confidence 459999999999986666 44446 77777 55566555 333 4455666666666666554 332 25
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCC
Q 012629 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (459)
Q Consensus 198 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (459)
+....+..+..++..+..++...+.++.+.+.++.. . ...+.+.++++.|.+++.+.....++.. +..+.|.|+++
T Consensus 172 ~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~-~--~~~~~v~~~~~~W~lsllY~~tFG~Fvg-fs~~l~~~~~~ 247 (417)
T COG2223 172 RNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL-P--AQLKAVFSNKDTWLLSLLYFATFGGFVG-FSAYLPMYLVT 247 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc-h--hHHHHHhcCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 665555555555555555544443332111111111 0 4556778899999999999888888776 58899999999
Q ss_pred ccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhH
Q 012629 278 DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (459)
Q Consensus 278 ~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (459)
+++.+. +.......+.+.+.++++|+++||+|.+| ++...+..+.++............ . ....+..
T Consensus 248 ~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r--v~~~~f~~~~~~~~~l~~~~~~~~------~--~~~~~~~ 317 (417)
T COG2223 248 QFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRR--VTLAVFVGMALAAALLSLFLTGFG------H--GGSFVVF 317 (417)
T ss_pred hcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchh--HHHHHHHHHHHHHHHHHccccccc------c--CcchHHH
Confidence 988865 56667777888999999999999999988 355566555555555444432210 0 1112344
Q ss_pred HHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhh-------hHHHHHhhhccCcchhHHHHHHHHHHHHHHH
Q 012629 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL-------NIFVCVVLYNVDAFPITVMFGMCSIFLLVAS 427 (459)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 427 (459)
+...+...+..+..+...+..+..++|++ .|.+.|+..... +...+ ...+.++ .+...+..+....+++.
T Consensus 318 ~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-~G~v~G~vga~G~lGGf~lp~~~g-~~~~~tg-~~~~~f~~~~~~~~~a~ 394 (417)
T COG2223 318 VAVFLALFVFAGLGNGSVFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFLPLAFG-VSLDLTG-SYTGAFMLLLAFYLVAL 394 (417)
T ss_pred HHHHHHHHHHhccCcchheeechHHHHhh-hhHHHHHHHHhccccccchhHHHH-HHHHhcc-cHHHHHHHHHHHHHHHH
Confidence 55566666777777777888888888764 555666655432 11222 2234433 45555555555555555
Q ss_pred HHHhhhhc
Q 012629 428 VLQRRLMV 435 (459)
Q Consensus 428 ~~~~~~~~ 435 (459)
......++
T Consensus 395 v~~~~~y~ 402 (417)
T COG2223 395 VLTWALYA 402 (417)
T ss_pred HHHHHHHH
Confidence 44444433
No 61
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.94 E-value=1.2e-23 Score=203.63 Aligned_cols=360 Identities=18% Similarity=0.226 Sum_probs=239.4
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHH-H-H-
Q 012629 41 NYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-C-I- 117 (459)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~-~-l- 117 (459)
.+.....+.++++++....++-+..+..-|+..++.+.....+...++++++|.++||++|||+++.+.++.++. . +
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~ 93 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLA 93 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Confidence 445566777888888855555556666778888999999999989999999999999999999999998877553 2 2
Q ss_pred -Hhh--CCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC
Q 012629 118 -TKH--SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (459)
Q Consensus 118 -~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (459)
... ..+.+.+++.-++.|++.+...|+..+ ++.|..++........ ..+. ...+..++||.+++.+....|
T Consensus 94 ~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A-~ip~lV~~~~L~~A~a-l~s~----~~niar~iGPalgG~Lva~~G 167 (524)
T PF05977_consen 94 VLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQA-IIPELVPKEDLPAANA-LNSI----SFNIARIIGPALGGILVAFFG 167 (524)
T ss_pred HHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccHhhHHHHHH-HHHH----HHHHHHhccchHHHHHHHHHH
Confidence 122 347788999999999999999999877 8888755544443221 2232 333445555555555554333
Q ss_pred CccccchhhHHHHHHHHHHHHHhhcccc-CCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccc
Q 012629 195 LGPVAPFDAAACFLAIGMVIILSSWTEN-YGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (459)
Q Consensus 195 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (459)
- ...|.+.++..++...... .++.+ ++++.++++..+..++..+.+.++|..........++...... ....+|.
T Consensus 168 ~--~~~f~inalsfl~~i~~l~-~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a-~~aLlPl 243 (524)
T PF05977_consen 168 A--AAAFLINALSFLISILALL-RWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASA-VWALLPL 243 (524)
T ss_pred H--HHHHHHHHHHHHHHHHHHH-HccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhH-HHHhhhH
Confidence 3 4567776666555444443 33332 2222233344556677777778777765554433333333222 3456788
Q ss_pred cCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcccc
Q 012629 274 LSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (459)
Q Consensus 274 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (459)
+.++.++.++ |++.+..+++.++|.++.+++.+|+++++ ++..+....++......+....
T Consensus 244 ~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~--lv~~~~~~~a~~~~~lal~~~~-------------- 307 (524)
T PF05977_consen 244 FARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRR--LVLLASLLFALALLLLALSPSF-------------- 307 (524)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch--hhHHHHHHHHHHHHHHhcchHH--------------
Confidence 8877766654 78889999999999999999999987765 3445555555544444443333
Q ss_pred chhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHH
Q 012629 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLL 424 (459)
Q Consensus 351 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 424 (459)
+...+.+++.|++........++..++..|++.||+++++.++. .+..+.+.+.+. .+....+..+++..+
T Consensus 308 -~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~--~g~~~al~~a~~~ll 384 (524)
T PF05977_consen 308 -WLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH--FGVRTALLIAGAALL 384 (524)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHH
Confidence 45667778888888888888999999999999999999988763 333444555444 344444555544444
Q ss_pred HHHHH
Q 012629 425 VASVL 429 (459)
Q Consensus 425 ~~~~~ 429 (459)
+..++
T Consensus 385 l~~~~ 389 (524)
T PF05977_consen 385 LSALI 389 (524)
T ss_pred HHHHH
Confidence 43333
No 62
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.93 E-value=1e-24 Score=206.65 Aligned_cols=330 Identities=14% Similarity=0.124 Sum_probs=206.5
Q ss_pred HHHHHHHhhhhccchhhh-hhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCC
Q 012629 45 VYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP 122 (459)
Q Consensus 45 ~~~~~~~~~~~~~p~l~~-~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~ 122 (459)
..+..........|++|. +.+++|+|+.+.+++.+...+...++.++.|+++||+|||+.+..+.++..++. ++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~ 88 (366)
T TIGR00886 9 GFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV 88 (366)
T ss_pred HHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh
Confidence 333334444445888885 889999999999999999998888999999999999999999999999998876 668888
Q ss_pred -chHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc----cC
Q 012629 123 -QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS----FS 194 (459)
Q Consensus 123 -~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~----~~ 194 (459)
+++.+++.|+++|++.+.. +...+ ++.|+ ++|+...+. ......+|..+++.+++.+.....+. ..
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~~~~~~~~r~~~~~~----~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 89 QSYSVLLLLRLFIGIAGGSF-ASCMP-WISFFFPKKIQGTALGL----AAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred hhHHHHHHHHHHHHHhchhh-HhHHH-HHHHhcCHhhhhHHHHH----HHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 9999999999999986654 44445 77776 344554443 22233445556666665555433221 11
Q ss_pred Cccccch-hhHHHHHHHHHHHHHhhccccCCCCCchhh-HH--------HHHHhhhHHhcchhHHHHHHHHHHhhhhhhh
Q 012629 195 LGPVAPF-DAAACFLAIGMVIILSSWTENYGDPSESKD-LL--------TQFRGAAVAIASDEKIALLGAIQSLFEGSMY 264 (459)
Q Consensus 195 ~~w~~~f-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (459)
.+||+.| ...+.+..+...+.....+|++++++++++ .. ++..+..++.+++|+++...+...+.....+
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFL 242 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHH
Confidence 2456666 333333333333333333433221111100 00 0001134456777777776665555444444
Q ss_pred hhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCC
Q 012629 265 TFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSN 341 (459)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (459)
. ...+.|.|.++.++.+. +.......+..++++++.+++.||+|+|+. .....................
T Consensus 243 ~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~--~~~~~~~~~~~~~~~~~~~~~----- 314 (366)
T TIGR00886 243 G-VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARK--LLMSFLGVAMGAFLVVLGLVS----- 314 (366)
T ss_pred H-HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchh--HHHHHHHHHHHHHHHHhcCCC-----
Confidence 4 46778888877666544 556667778889999999999999998763 333333333322222221111
Q ss_pred CCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 342 VKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
..+ .+.......+.....+...+..++...|..| +++|++.|+.+..
T Consensus 315 --~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~ 361 (366)
T TIGR00886 315 --PLS----LAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAI 361 (366)
T ss_pred --cch----HHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHh
Confidence 000 1233444555666677777778888888887 5789988886653
No 63
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.93 E-value=1.9e-24 Score=203.75 Aligned_cols=305 Identities=15% Similarity=0.119 Sum_probs=195.8
Q ss_pred ccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 012629 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 56 ~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G 135 (459)
..|.+|.+.+|+|.|+++.|++.+...+...+++++.|+++||+|||+++..+.++..++.+...+++++.+++.|++.|
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIG 98 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 38899999999999999999999999998889999999999999999999999888777653337788999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~ 213 (459)
++.+...+.... ++.|. ++|++..+ ..+.+.. +|..+++.+.+.+.++.+++||..|...+.+.++...
T Consensus 99 ~g~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~----~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 169 (355)
T TIGR00896 99 VGIAIINVLLPS-LIKRDFPQRVGLMTG----LYSMALM----GGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL 169 (355)
T ss_pred HHHHHHhccchH-HHHHhCcchhhHHHH----HHHHHHH----HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 999987776644 66665 33333333 2333333 4444444444444443444578777665554433322
Q ss_pred HHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHH
Q 012629 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATF 290 (459)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 290 (459)
. ..|+.+++++++++. .....++.+|+|+.+.......+.....+. ...|.|.|.++ .+.+. +...+..
T Consensus 170 ~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lp~~~~~-~g~~~~~~g~~~~~~ 241 (355)
T TIGR00896 170 A---WIPQVRRRVAANQTT---TRLTPVRIWRSPLAWQVTVFFGLQSGLYYS-LIGWLPAILIS-HGASAATAGSLLALM 241 (355)
T ss_pred H---HhhhhccccCCCCCC---CCCCCchhhcCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHH-cCCCHHHHHHHHHHH
Confidence 2 233322221111110 011234566778777665555544444444 46788888865 35543 6677788
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhh
Q 012629 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWP 370 (459)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 370 (459)
.++.++++++.|++.||+++|+. .+..+..+..++.......... .......+.|++.+...|
T Consensus 242 ~~~~i~~~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~g~~~g~~~~ 304 (355)
T TIGR00896 242 QLAQAASALLIPALARRVKDQRG-IVAVLAVLQLVGLCGLLFAPMH----------------GLWAWALVLGLGQGGAFP 304 (355)
T ss_pred HHHHHHHHHhHHHHHhhhccchH-HHHHHHHHHHHHHHHHHHhhhh----------------HHHHHHHHHHHhhhhHhH
Confidence 89999999999999999955442 2333333333333322222111 112245677888888888
Q ss_pred HHHHHHhccCC-hhhhhhhhhhhhh
Q 012629 371 SIMKMRSQYIP-EEARSTIMNFFRI 394 (459)
Q Consensus 371 ~~~~~~~~~~p-~~~r~~~~g~~~~ 394 (459)
...+...+..+ ++.+++..++.+.
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~ 329 (355)
T TIGR00896 305 LALTLIGLRSRQAAQAAALSAMAQS 329 (355)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHH
Confidence 87777665544 5667777766543
No 64
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.93 E-value=1.5e-24 Score=206.48 Aligned_cols=314 Identities=13% Similarity=0.092 Sum_probs=202.1
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
.+.+|.+.+++|.+..+.|++.+...+...++.++.|+++||+|||+++..+.++.+++. +.+++++++.+++.|++.|
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 94 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNG 94 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 566678889999999999999999988888999999999999999999999999998876 6688899999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhh-hhhhhcccccCCccccchhhHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG-LFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~-~l~~~l~~~~~~~w~~~f~~~~~~~~i~ 211 (459)
++.+...+...+ ++.|. ++|++..+.... . ..+|..+++ .++..+.+. ++||..|.+.+.+.++.
T Consensus 95 ~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~----~----~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 163 (379)
T TIGR00881 95 IFQGMGWPPCGR-TVTKWFSRSERGTWVSFWNC----S----HNVGGGLLPPLVLFGIAEL--YSWHWVFIVPGIIAIIV 163 (379)
T ss_pred hhccccCCchHH-HHHHhcCHhhheeeEeehhc----c----chhHHHHHHHHHHHHHHhc--CCchhHHHHHHHHHHHH
Confidence 999998888866 77776 445555553333 2 334444444 233333333 45667787777666555
Q ss_pred HHHHHhhccccCCCC----------Cchh-------hHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 212 MVIILSSWTENYGDP----------SESK-------DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 212 ~~~~~~~~~~~~~~~----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
.+......||+++++ ++.+ +..++.+...+..+++|.++...+...+....... ...+.|.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (379)
T TIGR00881 164 SLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTG-ILDWSPLY 242 (379)
T ss_pred HHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 444443444432110 0000 00011112344566778777776666555555444 46788888
Q ss_pred CCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccc
Q 012629 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (459)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (459)
.++..+.+. +.......++.+++.++.+++.||..+|+......... .............. ..+ .
T Consensus 243 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~----~ 310 (379)
T TIGR00881 243 LTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFM-ALIIVSLLVYWLNP-------AAN----P 310 (379)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHH-HHHHHHHHHHhcCc-------chh----H
Confidence 877666543 56677778889999999999999864333211111111 11111111111100 000 0
Q ss_pred hhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+.......+.+.......+....+..|..|++.|+++.|+.+.
T Consensus 311 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 353 (379)
T TIGR00881 311 LMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGF 353 (379)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHH
Confidence 1333444455554444556667889999999999999988876
No 65
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=1.2e-23 Score=206.84 Aligned_cols=319 Identities=15% Similarity=0.140 Sum_probs=184.6
Q ss_pred cchhhhhhhccCCC--------ccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhh---CCch
Q 012629 57 GPYVYYLYSTYGFG--------KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH---SPQY 124 (459)
Q Consensus 57 ~p~l~~~~~~~~~s--------~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~---~~~~ 124 (459)
.+.++.+.++++.+ ..+.+++.+..++...++++++|+++||+|||+++..+.++..++. ++.+ ..++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSV 127 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 55666677776666 7889999999999899999999999999999999999999988875 4433 3345
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhh---hhcccccCCccc
Q 012629 125 KILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG---NLLVDSFSLGPV 198 (459)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~---~~l~~~~~~~w~ 198 (459)
+.+++.|+++|++.+...+.... ++.|. ++|++..+. .. .+..+|..+++.++ ....+ ..+||
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~----~~----~~~~~G~~~~~~~~~~~~~~~~--~~~w~ 196 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPM-YLSEIAPKALRGALTSL----YQ----LAITFGILVAYGFGSGKVSLNN--TLGWR 196 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHH-HHHccCChhhhhhhhhH----HH----HHHHHHHHHHHHHHHHhhcCCC--CccHH
Confidence 58999999999999999888756 88887 334444432 22 23345555555555 33332 34677
Q ss_pred cchhhHHHHHHHHHHHHHhhccccCC------CCCchhhHHHHH-----------H-----------------hhhHHhc
Q 012629 199 APFDAAACFLAIGMVIILSSWTENYG------DPSESKDLLTQF-----------R-----------------GAAVAIA 244 (459)
Q Consensus 199 ~~f~~~~~~~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~-----------~-----------------~~~~~~~ 244 (459)
+.|.+.++..++..... ...||++. +.++.++..++. . +.+++.+
T Consensus 197 ~~f~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (481)
T TIGR00879 197 IPLGLQLIPAGLLFLGL-FFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLF 275 (481)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 77887555554443333 35565421 100000000000 0 0001111
Q ss_pred c-----hhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhH
Q 012629 245 S-----DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYM 316 (459)
Q Consensus 245 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l 316 (459)
+ .++.+.......+...........+.|.+.++ .+.+. +.......++.+++.++.+++.||++||+. +
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~ 352 (481)
T TIGR00879 276 SSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPL--L 352 (481)
T ss_pred hcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH--H
Confidence 1 12222222222222222222345556665543 34333 566667778889999999999999998873 4
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcch-hhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 317 QIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF-WPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
..+..+..+.............+. .+ ....+..+....++..+.+.. .+....+..|.+|++.|+++.++.+..
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 427 (481)
T TIGR00879 353 LIGAAGMAICLFVLGILGASFVTG---SS--KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAA 427 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCC---cc--cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHH
Confidence 444443333333332211110000 00 000012233333333333333 366778889999999999999887764
No 66
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=2.8e-23 Score=197.52 Aligned_cols=328 Identities=13% Similarity=0.097 Sum_probs=212.0
Q ss_pred HHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcc----hhhHHHHHHHHHHH-HHhh
Q 012629 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK----RACVTYCLTYILSC-ITKH 120 (459)
Q Consensus 46 ~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr----~~~~~~~~~~~~~~-l~~~ 120 (459)
++....+.++..|++|...+|+|.|.+++|++.+...+...+.++++|+++||+||| +.+.+..... .. ....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 455556778889999999999999999999999999988889999999999999994 3332222111 22 2344
Q ss_pred CCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCcccc
Q 012629 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVA 199 (459)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~ 199 (459)
+++++.+++.|++.|++.+...|...+ +..++ ++|++..+..+.. ..+|..++|.+++.+.++ ++||.
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a-~~~~~~~~~~~a~~~~~~~--------~~lg~~igp~lgg~l~~~--~g~~~ 159 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDA-LANTWQKQIGLDYGKVRLW--------GSIAFVIGSALTGKLVSW--FGEQA 159 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHH-HHHHHHhhccCCcchHHHH--------HHHHHHHHHHHHHHHHHH--cChhH
Confidence 688999999999999998888887655 66665 4455544433222 235666666777776654 45677
Q ss_pred chhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCcc
Q 012629 200 PFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE 279 (459)
Q Consensus 200 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (459)
.|+..+...++..+... ..||++++++++++ .++..++.++++|+|+++.......+....... ...+.|.|.++ .
T Consensus 160 ~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~-~ 235 (382)
T PRK11128 160 ILWILTAGVASMLLGQL-LRPTIMPQGESRQQ-ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAA-YYGFSAIYWQA-A 235 (382)
T ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCccccccc-cccccchHHHHHcChhHHHHHHHHHHHHHHhHh-HHHHHHHHHHH-C
Confidence 78776654444433332 34543322211111 111123566788899888776655555444333 34556666654 4
Q ss_pred CCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHH
Q 012629 280 EIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLL 356 (459)
Q Consensus 280 ~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (459)
|.+. +...+...+..++...+.+++.||+++|+ .+..+.....+........... +..++
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~l~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 298 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARD--LLLLSAICGVVRWGLMGSTTAL---------------PWLIV 298 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HHHHHHHHHHHHHHHHHhhhhH---------------HHHHH
Confidence 4443 66667777888888899999999998887 2444444433333322222211 35566
Q ss_pred HHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh-------hhhHHHHHhhhccC
Q 012629 357 GFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI-------PLNIFVCVVLYNVD 408 (459)
Q Consensus 357 ~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-------~~~~~~~~~l~~~~ 408 (459)
..++.+++.+...+....+..+. +++++++..+..+. ..++.+++.+.+..
T Consensus 299 ~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 299 IQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78888888888888888888887 55556777766552 23456666776654
No 67
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.93 E-value=1e-23 Score=198.92 Aligned_cols=321 Identities=15% Similarity=0.051 Sum_probs=200.5
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhccc-----Ccchhh-HHHHHHHHHHH-HHhhC---CchHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRAC-VTYCLTYILSC-ITKHS---PQYKI 126 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~~~-~~~~~~~~~~~-l~~~~---~~~~~ 126 (459)
.+.+|.+.+|+|+|.+++|...... ....+ .+++|+++||+ ||||.+ +.+.+..++.. ..++. .+.+.
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~~-~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLVG-LPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHHH-HHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 5667888999999999999886443 32333 77999999998 899975 55666666654 44565 45556
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC------Ccc
Q 012629 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS------LGP 197 (459)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~------~~w 197 (459)
+....++.+++.+...++..+ ++.|. ++|++..+.. ..+..+|.++++.++..+.+..+ |+|
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~r~~~~~~~--------~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w 156 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDA-WRLEILSDEELGYGSTIY--------IVGYRAGMLLSGSLALVLASPEFANTGLITLW 156 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhCCHhhhchHHHHH--------HHHHHHHHHHHHHHHHHHhhhccccccccccc
Confidence 777788888888888787766 77777 3444443322 22344555555555555444333 568
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhH---HHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK---IALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 198 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
|.+|.+.++..++..+...+..||++++++++++..++.++..++++++|. .+...+...+.....+. ...+.|.|
T Consensus 157 r~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 235 (356)
T TIGR00901 157 GYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSA-ATVLTTLF 235 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 999988888777655554434455432221111112223345566666664 55554444444444443 56778888
Q ss_pred CCCccCCch---hHHHHHHH-HHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcccc
Q 012629 275 SPNDEEIPH---GFIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (459)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (459)
.++ .|.+. +......+ +..+++.++++++.||+|+|+. +..+..+..+......+.....+. .+.....
T Consensus 236 l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~--l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 308 (356)
T TIGR00901 236 LLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA--LLLFGIVQALTNAGFVWLASNGHH----DGITFPH 308 (356)
T ss_pred HHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHHHhcCcc----cccccch
Confidence 776 66655 33444444 5678899999999999998773 444444444433333222111000 0000001
Q ss_pred chhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhh
Q 012629 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (459)
Q Consensus 351 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (459)
.+......++.+++.+..++...++.+|.+|++.||+.+|+.+...
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 1345556677788889999999999999999999999999876543
No 68
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.93 E-value=6.8e-24 Score=203.00 Aligned_cols=318 Identities=18% Similarity=0.212 Sum_probs=187.8
Q ss_pred CCccchhhHH-----HHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchH--------HHHHHHHHH
Q 012629 69 FGKGEIGQLF-----IAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYK--------ILMIGRILG 134 (459)
Q Consensus 69 ~s~~~~g~~~-----~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~--------~l~~~r~l~ 134 (459)
.++++.+... ...++...+++++.|+++||+|||+++..+.++..++. +++++++++ .+++.|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 4556665433 33444445677899999999999999999999998876 668888875 478999999
Q ss_pred HhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhccc--ccCCccccchhhHHHHHH
Q 012629 135 GIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD--SFSLGPVAPFDAAACFLA 209 (459)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~--~~~~~w~~~f~~~~~~~~ 209 (459)
|++.+...+.... ++.|+ ++|++..+ ....+..+|..+++.++..+...+.+ ...++||.+|.+.+++.+
T Consensus 107 G~~~~~~~~~~~~-~~~~~~~~~~r~~~~~----~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 181 (394)
T TIGR00883 107 GFSLGGEWGGAAL-YLAEYAPPGKRGFYGS----FQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVL 181 (394)
T ss_pred HhhccccccccHH-HhhhcCCcccchHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHH
Confidence 9999998888766 78877 33333333 23333333333333333322221111 124688888887766655
Q ss_pred HHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhH--HHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---h
Q 012629 210 IGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK--IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---G 284 (459)
Q Consensus 210 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 284 (459)
+..+.. ...||+++.++++++ .++.+++.++..++++ ++.......+.....+ ....+.|.|.++..+.+. +
T Consensus 182 ~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~ 258 (394)
T TIGR00883 182 IGLYLR-RNLEETPVFEKAQEK-HKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFY-LITTYLPTYLTQTLGLSANSAL 258 (394)
T ss_pred HHHHHH-HhcCCChhHHHHHhc-cccccCCHHHHHHhchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCChhHHH
Confidence 544332 244544321111110 1111223334444444 4444434333333333 356778888866555543 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHH-HHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL-LLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 285 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
.......+..+++.++.+++.||+|||+. +.....+..... ......... ++ .+......++.++
T Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~~~~~~~~g~ 324 (394)
T TIGR00883 259 LVLMLSLILFFITIPLSGALSDRIGRRPV--LIIFTVLAALLAVPLLMALLDS--------GS----FTLFFFLVLGLAL 324 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHH--HHHHHHHHHHHHHHHHHHHhcC--------Cc----hHHHHHHHHHHHH
Confidence 56666778889999999999999998872 322222222211 111111111 00 1244555677777
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhh-hh------hhHHHHHhhhccC
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFR-IP------LNIFVCVVLYNVD 408 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~------~~~~~~~~l~~~~ 408 (459)
+.+...+..++...|.+|++.|+++.++.. +. .++.+++.+.+..
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 325 IGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred HHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 787788889999999999999998877632 21 3345555555543
No 69
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.93 E-value=6.1e-23 Score=196.58 Aligned_cols=366 Identities=15% Similarity=0.043 Sum_probs=215.2
Q ss_pred HHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhccc-----Ccch-hhHHHHHHHHHHH
Q 012629 43 LLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKR-ACVTYCLTYILSC 116 (459)
Q Consensus 43 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~-~~~~~~~~~~~~~ 116 (459)
+.+++.-....++..+.+|...++.|+|.+++|.+...... .+..+++|+++||+ |||| .+..+..+.+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 34444445566666788889999999999999988666554 57788999999999 8876 6777777777664
Q ss_pred -HHhhC---CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc
Q 012629 117 -ITKHS---PQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (459)
Q Consensus 117 -l~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~ 192 (459)
..++. ++++.+++..++.++..+...+...+ ++.|+.+++++.. .+.....|..+|.++++.++..+.+.
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~r~~-----~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDA-YSTDVLHPEERGA-----GAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcChhhhhH-----HHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 44554 35677888888888888888888866 8888733332222 11122234555666666666655542
Q ss_pred cCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcc
Q 012629 193 FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (459)
Q Consensus 193 ~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (459)
. ++||..|++.+++.++..+.. ...||++++++++++..++..+..++++|+|.++.......+........ ..+.+
T Consensus 157 ~-~gw~~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~-~~~~~ 233 (402)
T PRK11902 157 V-LGWGNTYLLMAGLMLAGALTT-LWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFA-GSLST 233 (402)
T ss_pred c-cCHHHHHHHHHHHHHHHHHHH-HhcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHH-HHHHH
Confidence 2 478888988777666554433 35565433322222212233456667888888776655544444332221 22333
Q ss_pred ccCCCccCCch---hHHHHHHH-HHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcc
Q 012629 273 ALSPNDEEIPH---GFIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (459)
Q Consensus 273 ~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (459)
.+..+..|.+. +......+ ++.+++.++.+++.||+++|+. +........+............ ++
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~--l~~~~~~~~l~~l~~~~~~~~~-------~~-- 302 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRS--LMLFGVLQAVSNLGYWVLAVTP-------KH-- 302 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhcC-------Cc--
Confidence 34444456554 34443333 4578899999999999998762 3333333222222221111110 00
Q ss_pred ccchhHHHHH----HHHHhhhcchhhHHHHHHhccCChhhhhhhhhhh---hhhhhHHHHHhhhccCcchhHHHHHHHHH
Q 012629 349 FSGSLQLLGF----CTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF---RIPLNIFVCVVLYNVDAFPITVMFGMCSI 421 (459)
Q Consensus 349 ~~~~~~~~~~----~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (459)
.+...... +..+++.+...+....++++..|.+.++...++. ....++ +++.+.+. .++...+...++
T Consensus 303 --~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~G~l~~~--~G~~~~f~~~~~ 377 (402)
T PRK11902 303 --LWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSALASVGRVYVGP-TSGYLVEA--YGWPGFYLMTVV 377 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHH--hChHHHHHHHHH
Confidence 02233333 3445556666788888899999888776433332 222333 45566555 345666666666
Q ss_pred HHHHHHHHHhhhhc
Q 012629 422 FLLVASVLQRRLMV 435 (459)
Q Consensus 422 ~~~~~~~~~~~~~~ 435 (459)
+.+...+...+.++
T Consensus 378 ~~~~~~~~~~~~~~ 391 (402)
T PRK11902 378 IALPGLALLWLMRG 391 (402)
T ss_pred HHHHHHHHHHHHhh
Confidence 66555555444433
No 70
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=3e-23 Score=198.88 Aligned_cols=354 Identities=12% Similarity=0.029 Sum_probs=214.8
Q ss_pred HHHHHHHHHhhhhccchhh-hhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCc-chhhHHHHHHHHHHH-HHh
Q 012629 43 LLVYSLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVTYCLTYILSC-ITK 119 (459)
Q Consensus 43 ~~~~~~~~~~~~~~~p~l~-~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~~~~~~~~~~~~~-l~~ 119 (459)
-...++.+...++..|.++ .+.+++|++.+|+|++.+...+...++++++|+++||+|| |+++.++.+...++. +..
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 8 KFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 3344555555666644444 4457799999999999999999999999999999999965 778888877776665 557
Q ss_pred hCCchHHHHHHHHHHHhHhhhhhhhhhhhh---hh----h---ccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhc
Q 012629 120 HSPQYKILMIGRILGGIATSLLFSAFESWL---VA----E---HNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL 189 (459)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~---i~----~---~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l 189 (459)
+.++++.+++.|++.|++.+...+...+.. .. | ..+|.+.. + . +|..+++.+++.+
T Consensus 88 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~-------G---~----lG~~ig~~l~g~l 153 (418)
T TIGR00889 88 QVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVM-------G---T----IGFIAAMWAVSLL 153 (418)
T ss_pred HhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeee-------h---h----HHHHHHHHHHHHh
Confidence 888999999999999998777777665521 11 1 11222211 1 1 3444444555443
Q ss_pred ccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCch-hhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhh
Q 012629 190 VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES-KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVF 268 (459)
Q Consensus 190 ~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (459)
.. ...|+ +|++.+++.++..+.. ...||++++++++ .+..+......++.+|+|+++.......+...... ...
T Consensus 154 ~~--~~~~~-~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~ 228 (418)
T TIGR00889 154 DI--ELSNI-QLYITAGSSALLGVFA-LTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQ-ITN 228 (418)
T ss_pred cc--cchhH-HHHHHHHHHHHHHHHH-hcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHH-HHH
Confidence 21 22233 4666666555554443 3667654222211 11111111233457788887666555544433322 234
Q ss_pred hhccccCCCc-cC---------CchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccC
Q 012629 269 LWTPALSPND-EE---------IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVA 338 (459)
Q Consensus 269 ~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 338 (459)
.+.|.+.++. .+ ...+...+...+..+++.+..+++.||+|+|+ .+..+..+..+...........
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~--~l~~~~~~~~v~~~l~~~~~~~-- 304 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK--VMLLSLVAWALRFGFFAYGDPE-- 304 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHcCcc--
Confidence 4556555431 11 11267777788889999999999999999887 3444444444433333221110
Q ss_pred CCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhh-hh------hhHHHHHhhhccCc--
Q 012629 339 PSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR-IP------LNIFVCVVLYNVDA-- 409 (459)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~------~~~~~~~~l~~~~~-- 409 (459)
.. ..+..++..++.+++.+...+....++.|.+|++.|++++|+.+ .. .++.+++.+.+..+
T Consensus 305 -------~~--~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~ 375 (418)
T TIGR00889 305 -------YF--GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAY 375 (418)
T ss_pred -------hh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccc
Confidence 00 01234556777888888788888899999999999999998886 31 34455555555432
Q ss_pred --chhHHHHHHHHHHHHHHHH
Q 012629 410 --FPITVMFGMCSIFLLVASV 428 (459)
Q Consensus 410 --~~~~~~~~~~~~~~~~~~~ 428 (459)
.++...+..+++..++..+
T Consensus 376 ~~~~~~~~f~~~~~~~~i~~~ 396 (418)
T TIGR00889 376 GTFDWQTMWLFFAGYIAILAV 396 (418)
T ss_pred cCCchHHHHHHHHHHHHHHHH
Confidence 2455556555554444333
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.93 E-value=7.5e-23 Score=199.85 Aligned_cols=366 Identities=13% Similarity=0.039 Sum_probs=212.8
Q ss_pred HHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhccc-----Ccchh-hHHHHHHHHHHH
Q 012629 43 LLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRA-CVTYCLTYILSC 116 (459)
Q Consensus 43 ~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-----Grr~~-~~~~~~~~~~~~ 116 (459)
+.+++.......+..+.+|...++.|.+.+++|.+...... .++.+++|+++||+ ||||. +..+.+..+++.
T Consensus 18 ~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~ 95 (491)
T PRK11010 18 LILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA--YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAI 95 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHH
Confidence 33334444455566888888899999999999986333332 25677899999999 99986 556666666664
Q ss_pred -HHhhC---CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc
Q 012629 117 -ITKHS---PQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (459)
Q Consensus 117 -l~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~ 192 (459)
.+++. ++++.+.+.+++.|++.+...+...+ +..|+.++.++.. .......|..+|.++++.+...+.++
T Consensus 96 ~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a-~~~~~~~~~~rg~-----~~~i~~~g~~lG~llg~~l~~~l~~~ 169 (491)
T PRK11010 96 AAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDA-WKTDVLPAEERGA-----GAAISVLGYRLAMLVSGGLALWLADR 169 (491)
T ss_pred HHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcChhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44554 46788899999999999988888766 8888733222222 11123334556666666666666542
Q ss_pred cCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcc
Q 012629 193 FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (459)
Q Consensus 193 ~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (459)
.++||..|++.+++.++..+..+ ..||++++++++++..++..++.++.+++++.+.......+....... ...+.+
T Consensus 170 -~~GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~-~~~~~~ 246 (491)
T PRK11010 170 -YLGWQGMYWLMAALLIPCIIATL-LAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAF-AMSLTT 246 (491)
T ss_pred -ccCHHHHHHHHHHHHHHHHHHHH-hcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 25788999988877666655444 356643221111111111223455566666665554444433333332 355666
Q ss_pred ccCCCccCCch---hHHHH-HHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcc
Q 012629 273 ALSPNDEEIPH---GFIFA-TFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (459)
Q Consensus 273 ~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (459)
.|+.+..|.+. +.... ...++.+++.++.|++.||+++|+. +.....+..+........... .++.
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~--l~i~~~l~~l~~l~~~~l~~~-------~~~~- 316 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRA--LMIFGILQGVSNAGYWLLSIT-------DKNL- 316 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhc-------cccH-
Confidence 67655566655 44443 3446889999999999999998762 333333222222221111111 0000
Q ss_pred ccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhh------hHHHHHhhhccCcchhHHHHHHHHHH
Q 012629 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNVDAFPITVMFGMCSIF 422 (459)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~ 422 (459)
+.+....++..++.+...+...++..+..|++.+++.+++.+... ...+.+.+.+.. ++...+....+.
T Consensus 317 ---~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~--G~~~~f~~~~~~ 391 (491)
T PRK11010 317 ---YSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH--GWPTFYLFSVAA 391 (491)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ChHHHHHHHHHH
Confidence 122334444444555556667888888888888888777666521 112234444442 455556555555
Q ss_pred HHHHHHHHhhhh
Q 012629 423 LLVASVLQRRLM 434 (459)
Q Consensus 423 ~~~~~~~~~~~~ 434 (459)
.+.+.+.....+
T Consensus 392 ~l~~l~~~~~~~ 403 (491)
T PRK11010 392 AVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHH
Confidence 555544444433
No 72
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=1.5e-23 Score=202.09 Aligned_cols=358 Identities=13% Similarity=0.058 Sum_probs=197.2
Q ss_pred hHHHHHHHHHHHHhhhhccchhhhhhh-ccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHH
Q 012629 39 KNNYLLVYSLMMAGDWLQGPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI 117 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l 117 (459)
.|......++..++.+...|++|...+ ++|+|+.++|.+.+...+...+.++++|+++||+|||++++++..+.++...
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 91 (420)
T PRK09528 12 YWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFG 91 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 444444555555555666777776654 5999999999999999999999999999999999999999887665554321
Q ss_pred -H-h--hCCc-----hHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012629 118 -T-K--HSPQ-----YKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (459)
Q Consensus 118 -~-~--~~~~-----~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (459)
. . .++. .....+.++..|.+.....+.... +..+. +++++..+..+. . ..+|..+++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~g~~~~----~----~~~g~~i~~~~~g 162 (420)
T PRK09528 92 PFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEA-YIERVSRRSGFEYGRARM----W----GSLGWALCAFIAG 162 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhh-HHHHHHhhccccchhhHH----h----hhHHHHHHHHHHH
Confidence 1 1 1111 111122333333333333333322 33222 223333232221 2 2355555556666
Q ss_pred hcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCC---ch-hhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhh
Q 012629 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS---ES-KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (459)
Q Consensus 188 ~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (459)
.+.+ .+|+.+|+..+++.++.....+...||++++++ ++ ++..+...++.++.+|+|+++...+........
T Consensus 163 ~l~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~- 238 (420)
T PRK09528 163 ILFN---INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACF- 238 (420)
T ss_pred HHHh---cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHH-
Confidence 5543 356677887776666655555433333322210 00 000011112334567777766544433332222
Q ss_pred hhhhhhhccccCCCcc---CCc---hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhcc
Q 012629 264 YTFVFLWTPALSPNDE---EIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLV 337 (459)
Q Consensus 264 ~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 337 (459)
+.....+.|.|..+.. +.+ .+...+...+...++.++.|++.||+++|+. +..+..+..+......+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~l~~~~~~l~~~~~~~- 315 (420)
T PRK09528 239 YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA--LLLAGTIMAVRIIGSGFATGP- 315 (420)
T ss_pred HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh--hHHHHHHHHHHHHHHHhcccH-
Confidence 2222334455443221 222 2667777778888999999999999999873 444444444433333222111
Q ss_pred CCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhh-hhh------hhhHHHHHhhhccCcc
Q 012629 338 APSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF-FRI------PLNIFVCVVLYNVDAF 410 (459)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~------~~~~~~~~~l~~~~~~ 410 (459)
+..+....+.+.+.+...+....+..|..|++.+++..+. .++ ..++.+.+.+.+..
T Consensus 316 --------------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-- 379 (420)
T PRK09528 316 --------------LEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-- 379 (420)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 2445556666777766667777888999999998877544 222 13344455555542
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 012629 411 PITVMFGMCSIFLLVASV 428 (459)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~ 428 (459)
++...+..+++..++...
T Consensus 380 G~~~~f~~~~~~~~i~~~ 397 (420)
T PRK09528 380 GFQGTYLILGGIVLLFTL 397 (420)
T ss_pred CchHHHHHHHHHHHHHHH
Confidence 455555555554444333
No 73
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.92 E-value=4.7e-23 Score=196.71 Aligned_cols=312 Identities=9% Similarity=0.060 Sum_probs=205.9
Q ss_pred HhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH---hhCCchHH
Q 012629 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKI 126 (459)
Q Consensus 51 ~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~---~~~~~~~~ 126 (459)
+.+++..|++|.+.+++|+++.+.|++.+..+....+++++.|++.||+|||+++..+..+.+++. +. +..++++.
T Consensus 17 ~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~ 96 (410)
T TIGR00885 17 FANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTL 96 (410)
T ss_pred HHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 355566899999999999999999999999999899999999999999999999999999998875 33 23568999
Q ss_pred HHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc-----------
Q 012629 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS----------- 192 (459)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~----------- 192 (459)
+++.|++.|+|.|...+...+ ++.+. ++|+++.+. ......+|..+|+.+++.+.....+.
T Consensus 97 ~l~~~~l~G~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~ 171 (410)
T TIGR00885 97 FLVGLFILTAGLGFLETAANP-YILVMGPESTATRRLNL----AQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSP 171 (410)
T ss_pred HHHHHHHHHhhHHHHHhhhhH-HHHHHCCHhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCH
Confidence 999999999999999988766 66555 334444443 33344455555555555443221100
Q ss_pred ---------cCCccccchhhHHHHHHHHHHHHH-hhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhh
Q 012629 193 ---------FSLGPVAPFDAAACFLAIGMVIIL-SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGS 262 (459)
Q Consensus 193 ---------~~~~w~~~f~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (459)
...+||.+|.+.+.+.++..++.. ...||.+++++++ ++..+..++++|+|+++...+..++....
T Consensus 172 ~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~f~yvg~ 247 (410)
T TIGR00885 172 EELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQ----ISFSASLSRLARIRHYREGVIAQFFYVGV 247 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc----ccchhhHHHHHhChhHHHHHHHHHHHHHH
Confidence 013588889887776665443332 2345422211111 11122334567778877766555555444
Q ss_pred hhhhhhhhccccCCCc-cCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccC
Q 012629 263 MYTFVFLWTPALSPND-EEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVA 338 (459)
Q Consensus 263 ~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 338 (459)
... ...+.+.|.++. .+.+. +...+.......+|+++++++.||+++|+ .+........+...+.......
T Consensus 248 e~~-~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~--~l~i~~~~~~~~~ll~~~~~~~-- 322 (410)
T TIGR00885 248 QIM-CWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK--VLMAYAIIGMALCLGSIFAGGH-- 322 (410)
T ss_pred HHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHHHHcCCh--
Confidence 444 456777777542 23332 23344455678899999999999998776 3444444333333332221111
Q ss_pred CCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhh
Q 012629 339 PSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMN 390 (459)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g 390 (459)
.....+.+.+++.+..+|..++...+..+++.+..+.+
T Consensus 323 --------------~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~ 360 (410)
T TIGR00885 323 --------------VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAG 360 (410)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHH
Confidence 33566778888888899999999999999887644443
No 74
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.92 E-value=8.6e-25 Score=198.20 Aligned_cols=334 Identities=15% Similarity=0.121 Sum_probs=208.3
Q ss_pred hHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHH
Q 012629 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~ 114 (459)
.+..+.+.++.++-+.+| ....+.+.+++|++++..|.+.....+...+++|+.|+++|||+||+++.++..++.+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 455666667777777777 3455677789999999999998888888889999999999999999999999999999
Q ss_pred HH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 012629 115 SC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (459)
Q Consensus 115 ~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~ 190 (459)
+. .++++..||+++++|.+.|+|.+...|.+.+ +++|. .+|++..+ .++.....|. .+|.+.+..+.
T Consensus 111 Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s-~IaD~f~~~~Rs~~~~----ify~~ipvGs----glG~vvgs~va 181 (493)
T KOG1330|consen 111 AVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPS-LIADSFPDDKRSRVLG----IFYFAIPVGS----GLGYVVGSVVA 181 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhcccchh-HhhhcCcchhhhHHHH----Hhhhhccccc----ceeEEeeeeec
Confidence 86 6789999999999999999999999999977 99998 44444444 2333444444 44445555555
Q ss_pred cccCCccccchhhHHHHHHHHHHHHHhhccccCCC-CCchhhH------HHHHHhhhHHhcchhHHHHHHHHHHhhhhhh
Q 012629 191 DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD-PSESKDL------LTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (459)
Q Consensus 191 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (459)
++.+| ||+.|.+.+++.+++.++.....+|.+++ .++.+.. .....++.+.+.+++.+....+.....++..
T Consensus 182 ~~~~~-Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~ 260 (493)
T KOG1330|consen 182 SLTFW-WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVI 260 (493)
T ss_pred cCccc-eEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhc
Confidence 55666 89999999999998888877666665432 1111110 1112233444444444433333333333332
Q ss_pred hhhhhhhccccCCC-----ccCCchh-HHHHHHHHHHHHHHHHHHHHhhcCCCCcch--hHHHHH--HHHHHHHHHHH--
Q 012629 264 YTFVFLWTPALSPN-----DEEIPHG-FIFATFMLASMLGSSLASRLMARSPPRVES--YMQIVF--VVSSVSLLLPI-- 331 (459)
Q Consensus 264 ~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--~l~~~~--~~~~~~~~~~~-- 331 (459)
-. +..|.|.+... ++.-+.+ .+..+...++.+|.+.+|.++||+.|+..+ .....- ...++...++.
T Consensus 261 Gs-~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~ 339 (493)
T KOG1330|consen 261 GS-LSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLF 339 (493)
T ss_pred cc-cchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHH
Confidence 22 34555654432 1222233 445666678888889999999984322110 111111 11111111111
Q ss_pred HhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcc-hhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 332 VTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+....... .....+.+++.|..... .+........|.+|++.|.+++++...
T Consensus 340 ~~~~~~~~-----------s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~ 392 (493)
T KOG1330|consen 340 LFPAFTSS-----------SMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTV 392 (493)
T ss_pred HHHhhhhH-----------HHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHH
Confidence 11111000 01223333333333322 234555678899999999999987665
No 75
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.92 E-value=7.8e-23 Score=192.44 Aligned_cols=326 Identities=23% Similarity=0.304 Sum_probs=226.4
Q ss_pred HHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCch
Q 012629 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQY 124 (459)
Q Consensus 46 ~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~ 124 (459)
.+..........+..|.+.+++|.++.+.+++.+.......++.++.|+++||+|||+.+..+..+..++. ...+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (352)
T cd06174 8 FFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSL 87 (352)
T ss_pred HHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccH
Confidence 33444455555788888889999999999999999999889999999999999999999999999998876 55778999
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhcc---ccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccch
Q 012629 125 KILMIGRILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 201 (459)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~---~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f 201 (459)
+.+++.|++.|++.+...+...+ ++.|.. +|++..+.. ..+..+|..+++.+++.+.+..+ |+..+
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~~--~~~~~ 156 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAA-LIAEWFPPKERGRALGLF--------SAGFGLGALLGPLLGGLLAESLG--WRWLF 156 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHH-HHHHhCCccchhhhhhHH--------HHHHHHHHHHHHHHHHHHHHHhh--HHHHH
Confidence 99999999999999999888866 888773 344433322 22344555666666666655444 56777
Q ss_pred hhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCC
Q 012629 202 DAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI 281 (459)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (459)
.+.+...++...... ..+ |+++.......+....... ...+.|.+.++..+.
T Consensus 157 ~~~~~~~~~~~~~~~-~~~--------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 208 (352)
T cd06174 157 LILAILGLLLALLLL-FLL--------------------------RLLLLLALAFFLLSFGYYG-LLTYLPLYLQEVLGL 208 (352)
T ss_pred HHHHHHHHHHHHHHH-HHH--------------------------HHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCC
Confidence 777766665554443 222 3444444444444444443 466777777765444
Q ss_pred ch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHH
Q 012629 282 PH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGF 358 (459)
Q Consensus 282 ~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (459)
+. +.......++.+++.++.+++.||++||+. .+..+.....+........... +...+..
T Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~---------------~~~~~~~ 272 (352)
T cd06174 209 SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL-LLLIGLLLAALGLLLLALAPSL---------------ALLLVAL 272 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHhccH---------------HHHHHHH
Confidence 33 677778889999999999999999988761 2444444444444433322211 3566778
Q ss_pred HHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHHHHHH
Q 012629 359 CTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVASV 428 (459)
Q Consensus 359 ~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 428 (459)
.+.+++.+...+...++..|..|+++|++..|+.+.. .++.+.+.+.+. .++...+...++..++..+
T Consensus 273 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~--~~~~~~~~~~~~~~~i~~i 346 (352)
T cd06174 273 LLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT--GGYGGVFLILAALALLAAL 346 (352)
T ss_pred HHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCcchHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999887763 222333444333 3444455555454444433
No 76
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.91 E-value=2.1e-22 Score=192.58 Aligned_cols=356 Identities=13% Similarity=0.062 Sum_probs=208.6
Q ss_pred hhHHHHHHHHHHHHhhhhccchhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH
Q 012629 38 FKNNYLLVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (459)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~ 116 (459)
.-|......++...+.+...|++|... +++|.++.+.|.+.+...+...+++++.|+++||+|||+.++.+....+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 82 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLF 82 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 345555666667777777788887665 5689999999999999999999999999999999999999988776665432
Q ss_pred -H---HhhCC-----chHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 012629 117 -I---TKHSP-----QYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (459)
Q Consensus 117 -l---~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (459)
. ..+.+ ....+++.|++.|++.+...+.... +..|. ++++...+..+. . ..+|..+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~----~----~~~g~~~g~~~~ 153 (396)
T TIGR00882 83 APFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEA-YIEKVSRNSNFEYGKARM----F----GCVGWALCASIA 153 (396)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHH-HHHHhhhhcccccchhhh----h----cccHHHHHHHHH
Confidence 1 12222 2234566788888888888777755 55554 222222222111 2 235555666666
Q ss_pred hhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCchh----hHHHHHHhhhHHhcchhHHHHHHHHHHhhhhh
Q 012629 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESK----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGS 262 (459)
Q Consensus 187 ~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (459)
+.+.+ ++|+.+|++.+.+.++..++.+...||+++++++++ +..++..++.++.+|||+++............
T Consensus 154 g~l~~---~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~ 230 (396)
T TIGR00882 154 GILFS---IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACV 230 (396)
T ss_pred hhhhc---cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 65543 467888988877776655544433343322111000 00001112445677888876655444433322
Q ss_pred hhhhhhhhccccCCCcc---CCc---hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhc
Q 012629 263 MYTFVFLWTPALSPNDE---EIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFL 336 (459)
Q Consensus 263 ~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 336 (459)
+.....+.|.|.++.. +.+ .+...+...+...++....+++.||+++|+. +..+..+.++...........
T Consensus 231 -~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~--l~~~~~l~~l~~~~~~~~~~~ 307 (396)
T TIGR00882 231 -YDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA--LLIAGTIMSVRIIGSSFATTA 307 (396)
T ss_pred -HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh--HHHHHHHHHHHHHHHHhcCCh
Confidence 2222334455543322 222 2666677777888888999999999998872 444444444433332221111
Q ss_pred cCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhh-hhh------hhhHHHHHhhhccCc
Q 012629 337 VAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF-FRI------PLNIFVCVVLYNVDA 409 (459)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~------~~~~~~~~~l~~~~~ 409 (459)
+...+..++.+++..........+..+..|++.++++.+. .+. ..+..+++.+.+..
T Consensus 308 ---------------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~- 371 (396)
T TIGR00882 308 ---------------LEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI- 371 (396)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-
Confidence 2445556666666555445555677777888877776554 222 23334445555543
Q ss_pred chhHHHHHHHHHHHHH
Q 012629 410 FPITVMFGMCSIFLLV 425 (459)
Q Consensus 410 ~~~~~~~~~~~~~~~~ 425 (459)
++...+...++..++
T Consensus 372 -G~~~~f~~~~~~~~i 386 (396)
T TIGR00882 372 -GFQGAYLVLGCIVLL 386 (396)
T ss_pred -ccHHHHHHHHHHHHH
Confidence 445555554444443
No 77
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.3e-22 Score=193.00 Aligned_cols=346 Identities=20% Similarity=0.190 Sum_probs=229.1
Q ss_pred hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH--hhCCchHHHHHHHHHHHhHhhh
Q 012629 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT--KHSPQYKILMIGRILGGIATSL 140 (459)
Q Consensus 64 ~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~--~~~~~~~~l~~~r~l~G~~~~~ 140 (459)
..++++|..|.|++++..+.+..++..+.|+++||+|.|+++..+.++.+++. +. +...+++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 34788999999999999998888888899999999999999999999999875 55 3345666889999999999999
Q ss_pred hhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHh
Q 012629 141 LFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILS 217 (459)
Q Consensus 141 ~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~ 217 (459)
.+|+... +.+.| ++|++..+ ....|..+|.+++-++++.+.+. .+||+.+|++.+.+.++..++...
T Consensus 145 ~~pa~~~-i~~~W~P~~Ers~~~a--------il~~g~q~g~v~~mp~sg~lc~s-~~GW~sifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 145 LFPAIGS-ILAKWAPPNERSTFIA--------ILTAGSQLGTIITMPVSGLLCES-SLGWPSIFYVFGIVGLIWFILWFL 214 (466)
T ss_pred HHhhhhc-eeeeECCHHHHHHHHH--------HHHHHHHHHHHHHHHhHHHHhcc-CCCCchHHHHHHHHHHHHHHHHHH
Confidence 9999866 88877 34444333 33335667888887888888865 467889999999888876655543
Q ss_pred hccccC---CCCCchhh--HH-----HH----HHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch
Q 012629 218 SWTENY---GDPSESKD--LL-----TQ----FRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH 283 (459)
Q Consensus 218 ~~~~~~---~~~~~~~~--~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (459)
...|++ +...+++. .. ++ ...+++++++++.+|...+..+......+. +..|.|.|+++.++.+.
T Consensus 215 ~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~-l~~y~PtY~~~VL~f~v 293 (466)
T KOG2532|consen 215 FYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYL-LLTYLPTYLKEVLGFDV 293 (466)
T ss_pred HhcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHhhHHHHHHhCCCh
Confidence 433322 22111111 00 00 122678899999999988888888777666 68999999998888754
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhhcCCCCc------chhHH-HHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchh
Q 012629 284 ---GFIFATFMLASMLGSSLASRLMARSPPRV------ESYMQ-IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (459)
Q Consensus 284 ---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~------~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (459)
|...++..+...+..+++|.++||..+|. .++.- ++....++.++.+.+.... +. +.
T Consensus 294 ~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~---------~~----~~ 360 (466)
T KOG2532|consen 294 RETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDE---------HR----LL 360 (466)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCC---------cc----hH
Confidence 78888999999999999999999986631 01111 1222222222222222211 01 12
Q ss_pred HHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhH-HHHHhhhccCcchhHHHHHHHHHHHHHH
Q 012629 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNI-FVCVVLYNVDAFPITVMFGMCSIFLLVA 426 (459)
Q Consensus 354 ~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 426 (459)
.++.+.+.....|...+-.+.-..|..| +..+..+|+.+.. .++ +++....+.+...+..+|.+.++..++.
T Consensus 361 a~~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~ 439 (466)
T KOG2532|consen 361 AVILLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVG 439 (466)
T ss_pred HHHHHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 3333333333334444445555555444 4567777776663 122 2222222323446788888888777777
Q ss_pred HHHHhhhh
Q 012629 427 SVLQRRLM 434 (459)
Q Consensus 427 ~~~~~~~~ 434 (459)
.+.+....
T Consensus 440 ~i~f~~f~ 447 (466)
T KOG2532|consen 440 NIIFLFFG 447 (466)
T ss_pred chheeEee
Confidence 66555443
No 78
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.91 E-value=9.5e-22 Score=190.90 Aligned_cols=311 Identities=13% Similarity=0.110 Sum_probs=192.8
Q ss_pred hhhhccCCCccchhhHHHHHHHHhhhhhccccchhcc----cCcch-hhHHHHHHHHHHH-HHhhCCc------hHHHHH
Q 012629 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKR-ACVTYCLTYILSC-ITKHSPQ------YKILMI 129 (459)
Q Consensus 62 ~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~-~~~~~~~~~~~~~-l~~~~~~------~~~l~~ 129 (459)
.+.+++|+++.++|.+.++..+...+..|+.|+++|| +|||| .++.+....+++. ++...++ ...+++
T Consensus 25 ~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 104 (437)
T TIGR00792 25 FYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYI 104 (437)
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 4456899999999999999999999999999999997 67755 5667777777665 4455543 345677
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhc----cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc-cccCCccccchhhH
Q 012629 130 GRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV-DSFSLGPVAPFDAA 204 (459)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~-~~~~~~w~~~f~~~ 204 (459)
.+++.+++.+...+...+ +..|. ++|++..+. ...+..+|..++..+.+.+...+. ....++||..+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~R~~~~~~----~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 105 TYILLGLFYSFVNIPYWS-LVPAITLDPRERESLSTF----RRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHhhcccHhh-CcccccCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 788888888876655544 55544 344443332 222333344344333322222211 11235788888888
Q ss_pred HHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCc--
Q 012629 205 ACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP-- 282 (459)
Q Consensus 205 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 282 (459)
+++..+..+......||++++.+++++...+..+..+.++++|+++.......+.....+. ...+.+.|.+...+.+
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 258 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNI-KNGVQVYYFTYVLGDPEL 258 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HcchhheeEeeecCChHH
Confidence 8777776666555666654221111111112344566778888888776665555554443 3445555655544422
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHH
Q 012629 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (459)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (459)
.+.......++.+++.++.+++.||+|+|+ .+..+..+..+......+.... .+...+..++.+
T Consensus 259 ~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~--~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~g 322 (437)
T TIGR00792 259 FSYMGSIAIVAGLIGVLLFPRLVKKFGRKI--LFAGGILLMVLGYLIFFFAGSN--------------LPLILVLIILAG 322 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHcchh--------------HHHHHHHHHHHH
Confidence 245556667889999999999999999876 3444444433333332221111 024455667778
Q ss_pred hhhcchhhHHHHHHhccCC-------hhhhhhhhhhhhh
Q 012629 363 ACVGIFWPSIMKMRSQYIP-------EEARSTIMNFFRI 394 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~ 394 (459)
++.+...+..++..+|..| ++.+|+..|+.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 361 (437)
T TIGR00792 323 FGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTF 361 (437)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHH
Confidence 8888888889999998876 3446777777766
No 79
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=3.3e-22 Score=190.65 Aligned_cols=312 Identities=11% Similarity=0.047 Sum_probs=205.7
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHH-HHHHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SCITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~-~~l~~~~~~~~~l~~~r~l~G 135 (459)
.+.+-.+.+|.+....+.+.+.++.++...++.+++|.+.||++-.+.+....+.+++ +.+....+|++.+++.|++.|
T Consensus 66 ~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llG 145 (495)
T KOG2533|consen 66 NASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLG 145 (495)
T ss_pred hHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3333345588889888999887877777778888999999999988888888888877 446677999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
+.++..+|.... ++..+ ++|+.+.+..... ..+|+.+|++++.-+...-....-.+||+.|.+.+++.++..
T Consensus 146 l~es~~wP~~~~-~lg~wy~~~e~g~r~~~~~a~----~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~g 220 (495)
T KOG2533|consen 146 LFESGGWPGVVA-ILGNWYGKSERGLRMGIWYAS----ASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLG 220 (495)
T ss_pred HHhcccchHHHH-HHHhhcChhhhhhhHHHHHHh----cchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHH
Confidence 999999999866 78877 6677777644443 333343444333332110000122467888999999988888
Q ss_pred HHHHhhccccCCCC---Cchhh-----HHH----------HHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 213 VIILSSWTENYGDP---SESKD-----LLT----------QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 213 ~~~~~~~~~~~~~~---~~~~~-----~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
++.++.+|+++.+. ++.++ ..+ ......++.+++|+.|..++...+.....++ ..+|+|.+
T Consensus 221 i~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~-~~~~lpl~ 299 (495)
T KOG2533|consen 221 IVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYG-FSYWLPLY 299 (495)
T ss_pred heEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhcccc-HHHHHHHH
Confidence 77777777755421 11110 000 1123456778899999999999998888887 58999999
Q ss_pred CCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCC---CCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcc
Q 012629 275 SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSP---PRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (459)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (459)
+++..+.+. +.+.....++++++.+++|.++||++ .++. .......+.............. .
T Consensus 300 l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~-~~~~~~~~~~~~g~~~l~~~~~--~--------- 367 (495)
T KOG2533|consen 300 LKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRL-LFIVFLCLYAIIGAISLLAAAV--L--------- 367 (495)
T ss_pred HHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHH-HHHHHHHHHHHHHHHHHHhhcc--c---------
Confidence 988544533 56667778999999999999999953 2221 1111111111111111111111 0
Q ss_pred ccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhh
Q 012629 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIM 389 (459)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~ 389 (459)
.....+......+.....+......++....+.|....
T Consensus 368 ---~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~ 405 (495)
T KOG2533|consen 368 ---PGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTT 405 (495)
T ss_pred ---hHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHH
Confidence 12233333334445556678888888888777665444
No 80
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.90 E-value=1.9e-21 Score=189.10 Aligned_cols=324 Identities=12% Similarity=0.084 Sum_probs=188.2
Q ss_pred chhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcc-cCcchhhHHHHHHHHHHH-HHhhCCchHH-HHHHHHHH
Q 012629 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSPQYKI-LMIGRILG 134 (459)
Q Consensus 58 p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~~-l~~~~~~~~~-l~~~r~l~ 134 (459)
.+...+.+++|.+.++.+++.+.......+..+++|+++|| +||||++..+.++++++. +++++++... ++++|.++
T Consensus 36 ~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~ 115 (489)
T PRK10207 36 ILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTI 115 (489)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 33335567899999999888888777777777899999999 999999999999999986 6677766444 55899999
Q ss_pred HhHhhhhhhhhhhhhhhhc-cccc-cchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 135 GIATSLLFSAFESWLVAEH-NKRG-FEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~-~~r~-~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
|+|.|...|...+ ++.|. .++. ++.+. ...+..+ ..+|..++|.+++++.++. +||+.|++.++...+..
T Consensus 116 ~ig~g~~~~~~~~-li~~~~p~~~~~~~~~-~~~~~~~----~nig~~~g~~l~g~l~~~~--gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 116 AVGNGLFKANPAS-LLSKCYPPKDPRLDGA-FTLFYMS----INIGSLISLSLAPVIADKF--GYSVTYNLCGAGLIIAL 187 (489)
T ss_pred HhccccccCCHHH-HHHHhcCCCchhhhcc-hhHHHHH----HHHHHHHHHHHHHHHHHhh--ChHHHHHHHHHHHHHHH
Confidence 9999999988866 77776 2221 22221 1123333 4455555555556655544 45677877544333222
Q ss_pred HHHH--h-hccccCCCCCc-hhhHHH-------------------H---H-----------------H--hhhHHhcchh
Q 012629 213 VIIL--S-SWTENYGDPSE-SKDLLT-------------------Q---F-----------------R--GAAVAIASDE 247 (459)
Q Consensus 213 ~~~~--~-~~~~~~~~~~~-~~~~~~-------------------~---~-----------------~--~~~~~~~~~~ 247 (459)
+... + ..++.++++++ ..+... + . . ...++..|+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r 267 (489)
T PRK10207 188 LVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNK 267 (489)
T ss_pred HHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 2221 1 11121111111 000000 0 0 0 0001122333
Q ss_pred HHHHHHHH-HHhhhhhhhhhhhhhccccCCCc-------cCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcc-----h
Q 012629 248 KIALLGAI-QSLFEGSMYTFVFLWTPALSPND-------EEIPHGFIFATFMLASMLGSSLASRLMARSPPRVE-----S 314 (459)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----~ 314 (459)
.+....+. ........+....+..+.+.++. ...+++.....+.+..++..++.+++.||+++|+. .
T Consensus 268 ~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~ 347 (489)
T PRK10207 268 MFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPM 347 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHH
Confidence 22222211 12222222332233444444321 22234556666667777888889999999988752 0
Q ss_pred hHHHHHHHHHHHHHHHHHhhh-ccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhh
Q 012629 315 YMQIVFVVSSVSLLLPIVTSF-LVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (459)
Q Consensus 315 ~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (459)
.+..+..+.+++......... .... .. ....|+.+...++.+++.+...|...+.+.+..|++.++.++|+.+
T Consensus 348 k~~~G~~l~~~~~~~~~~~~~~~~~~----~~--~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~ 421 (489)
T PRK10207 348 KFTLGMFLCSLGFLTAAAAGMWFADA----QG--LTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWF 421 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC----CC--ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHH
Confidence 133444444444333211111 1000 01 1123466778899999999999999999999999999999999887
Q ss_pred hh
Q 012629 394 IP 395 (459)
Q Consensus 394 ~~ 395 (459)
+.
T Consensus 422 l~ 423 (489)
T PRK10207 422 LT 423 (489)
T ss_pred HH
Confidence 63
No 81
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=9.6e-22 Score=212.42 Aligned_cols=336 Identities=15% Similarity=0.073 Sum_probs=206.3
Q ss_pred HHHHHHHHHHhhhhc-cc---hh-hhhhhccCCCcc-chhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHH---HH
Q 012629 42 YLLVYSLMMAGDWLQ-GP---YV-YYLYSTYGFGKG-EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL---TY 112 (459)
Q Consensus 42 ~~~~~~~~~~~~~~~-~p---~l-~~~~~~~~~s~~-~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~---~~ 112 (459)
++...++..+++++. .. +. +.+..+.+.+.. ..++..++..+...++++++|+++||+|||+++..... ..
T Consensus 16 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~ 95 (1140)
T PRK06814 16 LFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGI 95 (1140)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHH
Confidence 344455556666554 11 11 122233333333 35666667777788999999999999999998644222 22
Q ss_pred HHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 012629 113 ILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (459)
Q Consensus 113 ~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (459)
.+.. .+...+|++.++++|+++|++.+...|+..+ ++.++ +++++..+.. ..+..+|.++||.++++
T Consensus 96 ~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a-~l~~~~~~~~~~~a~~~~--------~~~~~ig~~igp~l~g~ 166 (1140)
T PRK06814 96 AALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS-ILPDHLNKDELLGANALV--------EAGTFIAILLGTIIGGL 166 (1140)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH-hhHhhcCccccchhhHHH--------HHHHHHHHHHHHHHHHH
Confidence 2222 3334589999999999999999999998877 77777 4444444432 22444666666677777
Q ss_pred cccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCc---hhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhh
Q 012629 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSE---SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (459)
Q Consensus 189 l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (459)
+....+ |+..|....+..++ .++....+|+.+.++++ .....++....++.+.+++.++...+...+.+.....
T Consensus 167 l~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (1140)
T PRK06814 167 ATISGN--FVILVALLMGIAVL-GWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAV 243 (1140)
T ss_pred HHhccc--cHHHHHHHHHHHHH-HHHHHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 665544 55556333333333 33333355554322211 1112233345667788888888877766666555444
Q ss_pred hhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 012629 266 FVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (459)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (459)
...+.|.|.++.++.+. +.+.+...++.+++.++.+++.||..+++. +..+..+.++..+.+.+........
T Consensus 244 -~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~-- 318 (1140)
T PRK06814 244 -VLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLY--VPIGALLMGLFGLDLAFASSSVPAE-- 318 (1140)
T ss_pred -HHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeee--ehHHHHHHHHHHHHHHhcccccccc--
Confidence 46788999887766654 677788889999999999999988765552 3333333333222222210000000
Q ss_pred CCCC--------ccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 343 KSGG--------ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 343 ~~~~--------~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
... .....+.+.+..+++|++.+...+...+.+++..|++.||+++|+.++.
T Consensus 319 -~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~ 378 (1140)
T PRK06814 319 -PAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVL 378 (1140)
T ss_pred -cccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHH
Confidence 000 0011245566777888888888888999999999999999999887763
No 82
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=4.4e-21 Score=180.45 Aligned_cols=360 Identities=17% Similarity=0.177 Sum_probs=203.9
Q ss_pred hccC--CCccchh----hHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-H---HhhCCchHHHHHHHHHH
Q 012629 65 STYG--FGKGEIG----QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I---TKHSPQYKILMIGRILG 134 (459)
Q Consensus 65 ~~~~--~s~~~~g----~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l---~~~~~~~~~l~~~r~l~ 134 (459)
+.+| .++++.. .+.+...+++++++...|.++||+|||..+.++.++..++. + ....+++.+++++|++.
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~ 126 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIV 126 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4456 4444444 44455667777888899999999999999999988887653 2 24588999999999999
Q ss_pred HhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHH
Q 012629 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (459)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~ 214 (459)
|+..|...... ++++.|..+...++. .+....++..+|.+++..++.--.--..-.|.+.+....+..++.++.
T Consensus 127 Gl~~gl~~~~~-pmyl~E~sP~~~RG~-----~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~ 200 (485)
T KOG0569|consen 127 GLACGLSTGLV-PMYLTEISPKNLRGA-----LGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL 200 (485)
T ss_pred HHHhHHHHHHH-HHHHhhcChhhhccH-----HHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH
Confidence 99999987776 558999854444432 222222333344444433322111001124666666666666655554
Q ss_pred HHhhccccCC-------CCCchhhHHHH-----------------H---------HhhhHHhcchhHHHH----HHHHHH
Q 012629 215 ILSSWTENYG-------DPSESKDLLTQ-----------------F---------RGAAVAIASDEKIAL----LGAIQS 257 (459)
Q Consensus 215 ~~~~~~~~~~-------~~~~~~~~~~~-----------------~---------~~~~~~~~~~~~~~~----~~~~~~ 257 (459)
.+ +.||+++ +++++++..+. . ..+.+++++++.... ......
T Consensus 201 l~-~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~ 279 (485)
T KOG0569|consen 201 LP-FLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSF 279 (485)
T ss_pred Hh-cCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHH
Confidence 44 7888543 22222111100 0 012335555543322 222333
Q ss_pred hhhhhhhhhhhhhccccCC-CccCCch-hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhh
Q 012629 258 LFEGSMYTFVFLWTPALSP-NDEEIPH-GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSF 335 (459)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 335 (459)
..+......+..|...+++ .++..+. .......++..++.++++.++.||.|||+ +++.+..+..+...++.....
T Consensus 280 ~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRp--Lll~~~~~~~~~~~~~~~~~~ 357 (485)
T KOG0569|consen 280 AQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRP--LLLISLSLMAVALLLMSIALF 357 (485)
T ss_pred HHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334444444443 3333332 35556667889999999999999999998 355555555554444433322
Q ss_pred ccCCCCCCCCCccccchhHHHHHHHHHhhhcchh-hHHHHHHhccCChhhhhhhhhhhhh---hhhHHHHHhhh-ccCcc
Q 012629 336 LVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW-PSIMKMRSQYIPEEARSTIMNFFRI---PLNIFVCVVLY-NVDAF 410 (459)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~p~~~r~~~~g~~~~---~~~~~~~~~l~-~~~~~ 410 (459)
.... .. .+..+..+.+.+++.+.++... |+.+-+.+|.+|++.|.++++.... ..+.+++.... .....
T Consensus 358 l~~~----~~--~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~ 431 (485)
T KOG0569|consen 358 LSNS----FG--SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI 431 (485)
T ss_pred HHHH----hh--hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2100 00 1111234566666777766664 8999999999999999999876655 34555543331 11122
Q ss_pred hhHHHHHHHHHHHHH-HHHHHhhhhcccCCC
Q 012629 411 PITVMFGMCSIFLLV-ASVLQRRLMVIADKP 440 (459)
Q Consensus 411 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 440 (459)
+. +.+..+.+.++. ....+...++.++|.
T Consensus 432 g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 432 GP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred cc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 33 334444343333 444444555554443
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.90 E-value=2.5e-21 Score=209.94 Aligned_cols=311 Identities=15% Similarity=0.049 Sum_probs=196.2
Q ss_pred cchhhhhhhccCCCccc--hhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH----HHhhCCchHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGE--IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHSPQYKILMIG 130 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~--~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~----l~~~~~~~~~l~~~ 130 (459)
..+.+.+..+++.+.+. .+++.++..+...++++++|+++||+|||++++.+.++..+.. ++..+++++.+++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 109 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAV 109 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 34444555666665433 5677777777788889999999999999999999887655432 23456789999999
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc--------cCCcccc
Q 012629 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS--------FSLGPVA 199 (459)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~--------~~~~w~~ 199 (459)
|+++|++.+...++..+ ++.|. ++|++..+.... + ..+|.++++.+++++.+. .+| |++
T Consensus 110 r~l~G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~----~----~~ig~~lg~~l~~~l~~~~~~~~~~~~~~-~~~ 179 (1146)
T PRK08633 110 TFLLGAQSAIYSPAKYG-IIPELVGKENLSRANGLLEA----F----TIVAILAGTALFSFLFESVNGNTPSEILG-RIA 179 (1146)
T ss_pred HHHHHHHHHhhchHHHh-hhHHhcCcccchhhhhHHHH----H----HHHHHHHHHHHHHHHHHhhcccccccccc-chH
Confidence 99999999999988866 88887 445555553333 2 334444444555544432 112 222
Q ss_pred chhhHHHHHHHHHHHHHhhccccCCCCCc-----hhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcccc
Q 012629 200 PFDAAACFLAIGMVIILSSWTENYGDPSE-----SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (459)
Q Consensus 200 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (459)
.+....+...+..++.....|+.+...++ .....+...+.++.+++++.++...+...+.....+. ...+.|.|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 258 (1146)
T PRK08633 180 PAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQL-AQANFPAY 258 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH-HHHhhHHH
Confidence 23222222222222233345554322111 1111223344566677888777665555544444333 45677877
Q ss_pred CCCccCCch----hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcccc
Q 012629 275 SPNDEEIPH----GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (459)
Q Consensus 275 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (459)
..+.++.+. +.+.+...++.+++.++.+++.||+++++. +.++..+..+...........
T Consensus 259 ~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------------- 322 (1146)
T PRK08633 259 AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL--VPLGALGLALSLFLLPTAPSL-------------- 322 (1146)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc--hhHHHHHHHHHHHHHHHhhhH--------------
Confidence 766555533 566677778899999999999999987762 434444333333333222211
Q ss_pred chhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 351 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
+..++..++.+++.++..+...+++.+..|++.||+++|+.++.
T Consensus 323 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~ 366 (1146)
T PRK08633 323 -ASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFL 366 (1146)
T ss_pred -HHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHH
Confidence 35566678888888888888999999999999999998887763
No 84
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=9.6e-21 Score=169.57 Aligned_cols=302 Identities=19% Similarity=0.215 Sum_probs=215.3
Q ss_pred hhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH---hhCCchHHH
Q 012629 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT---KHSPQYKIL 127 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~---~~~~~~~~l 127 (459)
.+....+.+|.+.+.++++..|.+.+....+....+.+++.|++.+|+|+|+.+++++.++++++ +. +...+|..+
T Consensus 28 ~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~F 107 (422)
T COG0738 28 ITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFF 107 (422)
T ss_pred HhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 45555889999999999999999999999988888999999999999999999999999999986 43 357788999
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc-----------c
Q 012629 128 MIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-----------F 193 (459)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~-----------~ 193 (459)
+++-++.|.|.+...+++++ ++... ++..++.+..+.. +++|.+++|++++.+..+ .
T Consensus 108 L~~lFila~Gi~~LetaaNp-~v~~lg~~~~a~~rlnl~q~f--------n~lGa~~gp~~g~~lils~~~~~~~~~~~~ 178 (422)
T COG0738 108 LVALFILASGIGLLETAANP-YVTLLGKPESAAFRLNLAQAF--------NGLGAILGPLLGSSLILSGVALTMSAAQIL 178 (422)
T ss_pred HHHHHHHHhhhHHHHhccch-HHHHhCCchhHHHHHHHHHHh--------hhhHHHHHHHHHHHHHHhhhhhccCHHHHH
Confidence 99999999999999999988 87665 2244445544443 335556666666665542 0
Q ss_pred C------CccccchhhHHHHHHHHHHHHH-hhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhh
Q 012629 194 S------LGPVAPFDAAACFLAIGMVIIL-SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTF 266 (459)
Q Consensus 194 ~------~~w~~~f~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (459)
. -.|+.+|...+....+..+... .+.|+.+...++..+.. .....+++++|+.+...+..++..+....
T Consensus 179 ~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~---~~~~~~l~~~~~~~~gvl~~FlYVG~Eva- 254 (422)
T COG0738 179 AIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASG---SAGLSSLFQNKHLRLGVLAIFLYVGAEVA- 254 (422)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccc---cchHHHHHhChHHHHHHHHHHHHHhHHHH-
Confidence 0 1256777766655554443332 34455433322221111 11345678889988888887777777665
Q ss_pred hhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 012629 267 VFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (459)
Q Consensus 267 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (459)
...|.+.|..+..+.+. +...+....+.++|++++.++.+|+...+ .+.....+..+.+....+....
T Consensus 255 ~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k--~Laf~a~~~ill~~~~~l~~g~------- 325 (422)
T COG0738 255 IGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEK--YLAFYALIAILLLLAVALIGGV------- 325 (422)
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHhcCh-------
Confidence 57888998887555443 56667778899999999999999996555 3444443433333333333332
Q ss_pred CCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh
Q 012629 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (459)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~ 384 (459)
+.+....+.|+..+..+|..++...+..|++.
T Consensus 326 ---------v~~~~l~~ig~F~simfPTIfslal~~l~~~t 357 (422)
T COG0738 326 ---------VALYALFLIGLFNSIMFPTIFSLALKNLGEHT 357 (422)
T ss_pred ---------HHHHHHHHHHHHhHHHHHHHHHHHHhccCccc
Confidence 66778888999999999999999999999443
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=3.9e-20 Score=179.85 Aligned_cols=340 Identities=13% Similarity=0.110 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHhhhhccchhhhhhh-c--cCCCccchhhHHHHHHHHhhhhhccccchhcc-cCcchhhHHHHHHHHHHH
Q 012629 41 NYLLVYSLMMAGDWLQGPYVYYLYS-T--YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC 116 (459)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~l~~~~~-~--~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~~ 116 (459)
.+....+.-.++.....+.+|...+ + +|++..+.|.+.+.......++.+++|+++|| +|||+++.++.++.+++.
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~ 93 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGH 93 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 3333333333444444666666654 4 89999999999999888888999999999999 899999999999999886
Q ss_pred -HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhcccc---ccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc
Q 012629 117 -ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR---GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (459)
Q Consensus 117 -l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r---~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~ 192 (459)
+.+++++++.+++.|.+.|++.|...+...+ +++|..++ +++..... ... .+..+|..+++.+++++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~a~~~~~~~~~~r~~~~~-~~~----~~~niG~~ig~~l~g~l~~~ 167 (475)
T TIGR00924 94 FMLAMSIYPDLIFYGLGTIAVGSGLFKANPSS-MVGKLYERGDMPRRDGGFT-LFY----MSINIGSFISPLLAGVIAEN 167 (475)
T ss_pred HHHHhcccHhHHHHHHHHHHhccccccCCHHH-HHHHhcCCCCcccccceeh-hHH----HHHHHHHHHHHHHHHHHHHh
Confidence 5678888888999999999999998888756 77665211 12222111 222 23445556666666666544
Q ss_pred cCCccccchhhHHHHHHHHHHHHHhh---ccccCCCCC---chh-hHHHHH-----------------------------
Q 012629 193 FSLGPVAPFDAAACFLAIGMVIILSS---WTENYGDPS---ESK-DLLTQF----------------------------- 236 (459)
Q Consensus 193 ~~~~w~~~f~~~~~~~~i~~~~~~~~---~~~~~~~~~---~~~-~~~~~~----------------------------- 236 (459)
. +|+..|.+.++..++..+..... .++.+++++ +++ +..+..
T Consensus 168 ~--g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (475)
T TIGR00924 168 Y--GYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMT 245 (475)
T ss_pred c--ChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4 46677877665444433332211 111111111 000 000000
Q ss_pred --------------HhhhHHhcchh--HHHHHHHHHHhhhhhhhhhhhhhccccCCCc-------cCCchhHHHHHHHHH
Q 012629 237 --------------RGAAVAIASDE--KIALLGAIQSLFEGSMYTFVFLWTPALSPND-------EEIPHGFIFATFMLA 293 (459)
Q Consensus 237 --------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 293 (459)
++..+...+++ .+..+.....+ ....+....+..+.+.++. ++.+.+...+.+.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~ 324 (475)
T TIGR00924 246 VTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVV-FWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFW 324 (475)
T ss_pred HHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHH-HHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHH
Confidence 00000000111 11111222222 2233333333344443332 233467888888888
Q ss_pred HHHHHHHHHHHhhcCCCC-----cchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcch
Q 012629 294 SMLGSSLASRLMARSPPR-----VESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF 368 (459)
Q Consensus 294 ~~~~~~~~g~l~dr~g~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 368 (459)
.++..++..++..|.+|| ....+..+..+.++++....+..... ..+.....++.+...++.+++....
T Consensus 325 iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~------~~~~~~s~~~~i~~~~~~~~ge~~~ 398 (475)
T TIGR00924 325 VVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFA------DAGGLTSPWFMVLIYLFQTLGELMI 398 (475)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhc------CCCCccCHHHHHHHHHHHHHHHHHH
Confidence 777777655443343332 21113455555555554443321111 0111223457788999999999999
Q ss_pred hhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 369 WPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
.|..+++..|..|++.||+.+|+....
T Consensus 399 ~p~~~~~~~~~aP~~~~g~~~g~~~l~ 425 (475)
T TIGR00924 399 SPLGLSWWTKIAPQRLMGQMLGMWFLA 425 (475)
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999999999999988763
No 86
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=1e-19 Score=177.88 Aligned_cols=321 Identities=15% Similarity=0.101 Sum_probs=186.7
Q ss_pred cchhhh-hhhccCCCccchhhHHHHHHHHhhhhhccccchhcc-cCcchhhHHHHHHHHHHH-HHhhCC-chHHHHHHHH
Q 012629 57 GPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSP-QYKILMIGRI 132 (459)
Q Consensus 57 ~p~l~~-~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~~-l~~~~~-~~~~l~~~r~ 132 (459)
.++++. +.+++|++.++.+++.+..........+++|+++|| +|||+++..+.++.+++. ++++++ +.+.+++.|+
T Consensus 41 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~ 120 (500)
T PRK09584 41 QGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMA 120 (500)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 444443 448899999888877666554444555689999999 599999999999998875 556654 5567778899
Q ss_pred HHHhHhhhhhhhhhhhhhhhc-c-ccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHH
Q 012629 133 LGGIATSLLFSAFESWLVAEH-N-KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (459)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~-~-~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i 210 (459)
++|++.|...+...+ ++.|. + ++.++.+. ++ ....+..+|..++|.+++++.++. +||..|.+.++...+
T Consensus 121 l~gig~g~~~~~~~~-l~~~~f~~~~~~~~~~----~~-~~~~~~~iG~~~gp~i~g~l~~~~--g~~~~F~i~~i~~~i 192 (500)
T PRK09584 121 TIAVGNGLFKANPSS-LLSTCYEKDDPRLDGA----FT-MYYMSINIGSFFSMLATPWLAAKY--GWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHhhhcccCCHHH-HHHHhcCCCchhhhhc----ch-HHHHHHHHHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHH
Confidence 999999988887755 77776 2 22222221 11 222345566677777777776544 567778877654443
Q ss_pred HH---HHHHhhccccCCCCCch-hhHHHH----------------------H-----------------Hhh--hHHhcc
Q 012629 211 GM---VIILSSWTENYGDPSES-KDLLTQ----------------------F-----------------RGA--AVAIAS 245 (459)
Q Consensus 211 ~~---~~~~~~~~~~~~~~~~~-~~~~~~----------------------~-----------------~~~--~~~~~~ 245 (459)
.. +......++..++++++ .+..+. . ... .++..
T Consensus 193 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 271 (500)
T PRK09584 193 TVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAA- 271 (500)
T ss_pred HHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHH-
Confidence 32 22222333321111110 000000 0 000 00011
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhccccCC----C-------ccCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCc--
Q 012629 246 DEKIALLGAIQSLFEGSMYTFVFLWTPALSP----N-------DEEIPHGFIFATFMLASMLGSSLASRLMARSPPRV-- 312 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-- 312 (459)
+++.+.. +...+....++. .....|.++. + +...+.+...+.+.+..++..++.+++.+|.++|.
T Consensus 272 ~~~~~~~-~~~~~~~i~f~~-~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~ 349 (500)
T PRK09584 272 RRKMIVA-FILMLEAIIFFV-LYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPM 349 (500)
T ss_pred HHHHHHH-HHHHHHHHHHHH-HHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc
Confidence 1222221 222222222222 2222333311 1 12234567777888777777777766666655442
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhh
Q 012629 313 ESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF 392 (459)
Q Consensus 313 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 392 (459)
.+.+.++..+.+++...........++ +-....++.+...++.+++.....|...+++.+..|++.||+.+|+.
T Consensus 350 ~~~~~~G~~l~~l~f~~l~~~~~~~~~------~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~ 423 (500)
T PRK09584 350 PHKFAIGMVLCSGAFLVLPLGAKFAND------AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSW 423 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHH
Confidence 233556666666666554443332111 11122346778899999999999999999999999999999999987
Q ss_pred hh
Q 012629 393 RI 394 (459)
Q Consensus 393 ~~ 394 (459)
..
T Consensus 424 ~l 425 (500)
T PRK09584 424 FL 425 (500)
T ss_pred HH
Confidence 54
No 87
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=4.2e-20 Score=181.96 Aligned_cols=328 Identities=17% Similarity=0.150 Sum_probs=199.2
Q ss_pred hhccchhhhhhhcc-----CCCc--cchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchH
Q 012629 54 WLQGPYVYYLYSTY-----GFGK--GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYK 125 (459)
Q Consensus 54 ~~~~p~l~~~~~~~-----~~s~--~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~ 125 (459)
+...+....+.++. ..+. ++.+++.+...+.+.+++++.|+++|++|||+.++++.+.+.++. ++++++|+.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~ 143 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWY 143 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 34456555555432 2222 244788888888888999999999999999999999999999986 779999999
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHH
Q 012629 126 ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA 205 (459)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~ 205 (459)
+++++|+++|+|.|...... +.+++|..+...|..... ........|..+|. .++.. .++..++||.++.+..
T Consensus 144 ~l~~GR~l~G~g~G~~~~~~-piy~sEiap~~~RG~l~~-~~~l~~~~Gi~~~~----~~~~~-~~~~~~~Wr~~~~~~~ 216 (513)
T KOG0254|consen 144 QLIVGRILTGLGVGGASVLA-PVYISEIAPAHIRGTLVS-LYQLFITIGILLGY----CINYG-TSKVYAGWRIPLGLAL 216 (513)
T ss_pred HHHHHHHHhccchhhhhhcc-hhhHhhcCChhhhHHHHH-HHHHHHHHHHHHHH----HHhhh-hccCCccHHHHHHHHH
Confidence 99999999999999998776 548999844433333211 22223333333332 22222 2111267898888777
Q ss_pred HHHHHHHHHHHhhccccCC------CCCchhhHHHHHHh----------------------------hhHHhcc--h-hH
Q 012629 206 CFLAIGMVIILSSWTENYG------DPSESKDLLTQFRG----------------------------AAVAIAS--D-EK 248 (459)
Q Consensus 206 ~~~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~----------------------------~~~~~~~--~-~~ 248 (459)
+..++..+. ....||+++ +.+++++..+.... ..+++.+ . ++
T Consensus 217 i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 295 (513)
T KOG0254|consen 217 IPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKR 295 (513)
T ss_pred HHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHH
Confidence 777766666 556776432 11111111111000 0111111 1 22
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch-hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHH
Q 012629 249 IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH-GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL 327 (459)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~ 327 (459)
.........+.+...+....+|.+.+++.....+. .......++..+++..+...+.||+|||+ .++.+.....++.
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~--lll~s~~~m~~~~ 373 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRK--LLLFGAAGMSICL 373 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHhHHHHHHHH
Confidence 23334444455555555567777777654322222 44445556778888888899999999998 3555655555555
Q ss_pred HHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchh-hHHHHHHhccCChhhhhhhhhhhhh
Q 012629 328 LLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW-PSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.+........... ........+..+...+++-..++..+ |..+.+.+|.+|.+.|+++.++...
T Consensus 374 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~ 438 (513)
T KOG0254|consen 374 VILAVVGVFALYY---PNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVA 438 (513)
T ss_pred HHHHHHHHHhccC---CCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHH
Confidence 5544433321110 00112222344555555555555444 7788899999999999999877654
No 88
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.88 E-value=5.2e-20 Score=173.41 Aligned_cols=369 Identities=19% Similarity=0.179 Sum_probs=224.7
Q ss_pred hHHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccC-cchhhHHHHHHHHHHH-
Q 012629 39 KNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-RKRACVTYCLTYILSC- 116 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G-rr~~~~~~~~~~~~~~- 116 (459)
+.++-..+++..+..+...|+++...++.|.|..|+|.+.+...+...+..+++|.++||++ +||.+.+..++.++..
T Consensus 4 ~~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~ 83 (400)
T PF03825_consen 4 KFRLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALL 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHH
Confidence 45555566666677777789998888999999999999999999988888889999999986 5777777666666654
Q ss_pred HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHH-hhhhhhhcccccC
Q 012629 117 ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAIL-SGLFGNLLVDSFS 194 (459)
Q Consensus 117 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~-~~~l~~~l~~~~~ 194 (459)
.....++++.++...++..+......|..++ +..+. ++++...+..+..-+ +|+.++... +..+.+. .+
T Consensus 84 ~~~~~~~f~~~~~~~~l~~~~~~p~~pl~ds-i~~~~~~~~~~~YG~iRlwGS----iGf~~~~~~~~~~~~~~----~~ 154 (400)
T PF03825_consen 84 LLAFSSSFWWLFVIMLLFSFFFSPTMPLSDS-IALSYLGDRGKDYGRIRLWGS----IGFIVAALAFGGLLGGY----LG 154 (400)
T ss_pred HHHHhccHHHHHHHHHHHHHHHccHHHHHHH-HHHHHcccccCCCCcchhhhh----HHHHHHHHHHHHHHHhh----hc
Confidence 4467888988888888888887777777766 54444 444454454444333 233333221 1122221 22
Q ss_pred Cc-cccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccc
Q 012629 195 LG-PVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (459)
Q Consensus 195 ~~-w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (459)
++ ....+++.+....+..... ..+|+.+++++++++..++...+..+++|+|++....+...+.+...-. ...+.+.
T Consensus 155 ~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~-~~~f~~~ 232 (400)
T PF03825_consen 155 ISGTSLIFYIAAILSLLLAGFA-LFLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAA-YYTFFSI 232 (400)
T ss_pred cccccHHHHHHHHHHHHHHHHH-HhCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 21 1223444444433332222 2456544222222221122222334678888887766555555444332 4667777
Q ss_pred cCCCccCC---chhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcccc
Q 012629 274 LSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (459)
Q Consensus 274 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (459)
|+++..+. ..+..+++..+++++.-...+++.+|+|.++ ++.++.....+=..+......+ .+..
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~--ll~~a~~~~~vR~~l~a~~~~~----------~~~~ 300 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW--LLLLALVAYAVRWLLYAYFSDP----------WPFI 300 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHHHHHHHHHHhcCC----------cHHH
Confidence 77765432 2366667777889999999999999998776 3444444433333333332111 0100
Q ss_pred chhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh-------hhHHHHHhhhccCcc----hhHHHHHHH
Q 012629 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP-------LNIFVCVVLYNVDAF----PITVMFGMC 419 (459)
Q Consensus 351 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-------~~~~~~~~l~~~~~~----~~~~~~~~~ 419 (459)
.........+.|+.++..+.....++.+..|++.|+++.++.+.. .+..+++.+.+..+. .+...+.++
T Consensus 301 ~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~ 380 (400)
T PF03825_consen 301 VALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVF 380 (400)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 011223345689999999999999999999999999999887652 333555666554322 223344444
Q ss_pred HHHHHHHHHHH
Q 012629 420 SIFLLVASVLQ 430 (459)
Q Consensus 420 ~~~~~~~~~~~ 430 (459)
++..++..+..
T Consensus 381 a~~~~~~~~~f 391 (400)
T PF03825_consen 381 AVMALVILVLF 391 (400)
T ss_pred HHHHHHHHHHH
Confidence 44444433333
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.88 E-value=4.3e-20 Score=171.29 Aligned_cols=332 Identities=12% Similarity=0.069 Sum_probs=199.3
Q ss_pred cchhhHHHHHHHHHHHHhh--hhccchhhhhhhccCCCccc-hhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHH
Q 012629 35 FNSFKNNYLLVYSLMMAGD--WLQGPYVYYLYSTYGFGKGE-IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (459)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~--~~~~p~l~~~~~~~~~s~~~-~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (459)
++.+++..+.+|...++.+ .-..-..|.+.+|+|+|.+| .|.+++..+....+..++.|+++||+|.|+++.++.+.
T Consensus 22 ~~~W~~~~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~ 101 (511)
T TIGR00806 22 LKSWRVLVLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALS 101 (511)
T ss_pred hcchhHHHHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 3445555555665554421 11123345777899999999 89888888887778888999999999999999999999
Q ss_pred HHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012629 112 YILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (459)
Q Consensus 112 ~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (459)
+++.. +.++++++..+.+.|++.|++.|... +... ++..+ ++|++..+ ....+..+|.++++++++
T Consensus 102 Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~s-yI~~WfP~kER~rats--------i~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 102 FVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSS-YIFSLVPPSRYQRAAA--------YSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHCCHHHHHHHHH--------HHHHHHHHHHHHHHHHHH
Confidence 99975 77899999999999999999999999 6545 78877 44444433 223345566666666666
Q ss_pred hcccccCCcc-ccchhhHHHHHHHHHHHHHhhccccCC------C---------------CCc---hh--------hHHH
Q 012629 188 LLVDSFSLGP-VAPFDAAACFLAIGMVIILSSWTENYG------D---------------PSE---SK--------DLLT 234 (459)
Q Consensus 188 ~l~~~~~~~w-~~~f~~~~~~~~i~~~~~~~~~~~~~~------~---------------~~~---~~--------~~~~ 234 (459)
+ ....+|++ +...++......+++++.+ ++|..++ + +++ .. ...+
T Consensus 172 l-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~-~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (511)
T TIGR00806 172 L-LVTLGWISYSTLNIISLVFMTFSVFLAL-FLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLV 249 (511)
T ss_pred H-HHhcCchhHHHHHHHHHHHHHHHHHHHH-hCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHH
Confidence 6 33334443 1122333333333333333 4442111 0 000 00 0011
Q ss_pred HHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccC-C--chhHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 012629 235 QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE-I--PHGFIFATFMLASMLGSSLASRLMARSPPR 311 (459)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 311 (459)
......+...+|++++...+-..+...+.+- +.+|....-++..+ . -.|.+-++..+.+.+.++..|++-.+..+.
T Consensus 250 ~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~q-v~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~ 328 (511)
T TIGR00806 250 RMLSELVTIYRNPQLLLWSLWWVFNSAGYYL-ITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW 328 (511)
T ss_pred HHHHHHHHHhcCcchhhhhHHHHHHhhHHHH-HHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh
Confidence 2223444556667665555444444444333 33333332211111 0 125666666677777888888885555322
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhh
Q 012629 312 VESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (459)
Q Consensus 312 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (459)
-...+.+...+.+..+.+ ... .++ .|+..++.++++..+....++...-+++....+.-|-.+|+
T Consensus 329 ~~l~l~v~s~~~~gll~~----m~~-------t~~----Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGi 393 (511)
T TIGR00806 329 SKLLIAVVSAIQAGLVFW----MSQ-------SHD----IWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGI 393 (511)
T ss_pred HHHHHHHHHHHHHHHhhh----hhc-------ccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEec
Confidence 211122222222222222 111 111 26888999999999998889999999999888888888888
Q ss_pred hhh
Q 012629 392 FRI 394 (459)
Q Consensus 392 ~~~ 394 (459)
.++
T Consensus 394 Ntf 396 (511)
T TIGR00806 394 NTF 396 (511)
T ss_pred HHH
Confidence 554
No 90
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.87 E-value=1.6e-19 Score=159.28 Aligned_cols=320 Identities=15% Similarity=0.136 Sum_probs=226.7
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHh
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGI 136 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~ 136 (459)
.|+++++.+|+|+|.+..|.+.+...+.-.+++++..++++|+|.++.+..++++..++.+.-...+.+.++.+-.+.|.
T Consensus 32 gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~G~ 111 (395)
T COG2807 32 GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLAGA 111 (395)
T ss_pred hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 99999999999999999999999998888899999999999999999999999999999866444478889999999999
Q ss_pred HhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHH
Q 012629 137 ATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 137 ~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
+.+.......+ ++.+.-+ ++.+.....++.....+..+++.+.+.+.... -+||.....-+...++.++..
T Consensus 112 gIav~nVLLPs-lIK~~Fp--k~~~~mtglYs~sl~~~aaLaa~lavpla~~~-----~gW~~aL~~WAl~allAl~~W- 182 (395)
T COG2807 112 GIAVINVLLPS-LIKRDFP--KRVGLMTGLYSTSLGAGAALAAALAVPLAQHS-----GGWRGALGFWALLALLALLIW- 182 (395)
T ss_pred hHHHHHHhhhH-HHHhhcc--cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-----ccHHHHHHHHHHHHHHHHHHH-
Confidence 99999877755 7776522 33344444777777778888888877777753 245665665566665554443
Q ss_pred hhcccc-CCC-CCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCc-cCC-chhHHHHHHHH
Q 012629 217 SSWTEN-YGD-PSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND-EEI-PHGFIFATFML 292 (459)
Q Consensus 217 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~ 292 (459)
+|.. +++ .+.+.+ ..+...++|+|..|.+.+.+.+.+...|. ...|+|.+..|. .+. +.|...+...+
T Consensus 183 --lPq~~r~~~~~~~~~-----~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~-~~~WLP~ili~~G~sa~~aG~llsl~~l 254 (395)
T COG2807 183 --LPQALREQAASIATK-----LVSVRKVWRSPLAWQVTLFMGLQSLLYYI-VIGWLPAILIDRGLSAAEAGSLLSLMQL 254 (395)
T ss_pred --hhhcccccccccccc-----cccccccccCchhHHHHHHHHhhHHHHHH-HHHHHHHHHHHcCCCHHHhhhHHHHHHH
Confidence 3332 111 111111 11223578999999999999888888777 689999988653 333 23778888889
Q ss_pred HHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHH
Q 012629 293 ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSI 372 (459)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 372 (459)
..++.++....+.+|...++. .......+..+..+...+.+.. ..+...++.|++.|..+|..
T Consensus 255 ~~~~~~ll~P~la~R~~n~r~-~~~~~~~~~l~G~~G~~~~P~~----------------~~~lw~~llG~G~G~~F~la 317 (395)
T COG2807 255 AQLPTALLIPLLARRSKNQRP-LVVLALLLMLVGLVGLLLAPGQ----------------LPILWALLLGLGQGGAFPLA 317 (395)
T ss_pred HHHHHHHHHHHHHHHhcccch-HHHHHHHHHHHHHHHHHHhhhh----------------HHHHHHHHHhCccchHHHHH
Confidence 999999999999998655542 2333333334443333333332 22333688999999999999
Q ss_pred HHHHhccCChhhhhhh-hhhhh----h--hhhHHHHHhhhccCcc
Q 012629 373 MKMRSQYIPEEARSTI-MNFFR----I--PLNIFVCVVLYNVDAF 410 (459)
Q Consensus 373 ~~~~~~~~p~~~r~~~-~g~~~----~--~~~~~~~~~l~~~~~~ 410 (459)
...+.+..++.+++.. .|+.+ + +.++...+.++|.++.
T Consensus 318 L~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs 362 (395)
T COG2807 318 LTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS 362 (395)
T ss_pred HHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC
Confidence 9999998876654422 23322 2 4666677777777653
No 91
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=4.7e-22 Score=179.71 Aligned_cols=384 Identities=12% Similarity=0.048 Sum_probs=224.2
Q ss_pred hHHHHHHHHHHHHhhhhc----cchhhhhhh-ccC-------CCccchhhHHHHHHHHhhhhhccccchhcccCcchhhH
Q 012629 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYS-TYG-------FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV 106 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~p~l~~~~~-~~~-------~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~ 106 (459)
+...+.+.....+.|++| .++.|.+.. ++| +++...+.+..+.++...+++++.|++.||+|||+++.
T Consensus 39 ~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG 118 (538)
T KOG0252|consen 39 HFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYG 118 (538)
T ss_pred HHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhh
Confidence 344556666667777777 333222221 122 33444456666666666677779999999999999999
Q ss_pred HHHHHHHHHH-HHhhCCc-------hHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHH
Q 012629 107 TYCLTYILSC-ITKHSPQ-------YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGN 175 (459)
Q Consensus 107 ~~~~~~~~~~-l~~~~~~-------~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~ 175 (459)
..++++.+++ +++++.. ..++...|++.|+|.|+.+|...+ +.+|. ++|+...+.....++.+...|.
T Consensus 119 ~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAt-I~SE~an~~~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 119 KELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSAT-IMSESANKKTRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred HHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHH-HhhhhhhhccccceeEEEEEecchhHhhcc
Confidence 9999999876 5554221 347889999999999999999855 88998 6778888877777777777777
Q ss_pred HHHHHHhhhhhhhccc-----ccCCccccchhhHHHHHHHHHHHHHhhccccCCCC-----C--chhhHHHH-HH-----
Q 012629 176 GLVAILSGLFGNLLVD-----SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP-----S--ESKDLLTQ-FR----- 237 (459)
Q Consensus 176 ~~g~~~~~~l~~~l~~-----~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~-----~--~~~~~~~~-~~----- 237 (459)
.++.++...+-..+-. +...-||..|.+.++..++.+...+ .+||+++-. + .+.+..++ ..
T Consensus 198 ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~ 276 (538)
T KOG0252|consen 198 IVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETARYTALVSKKLKQAAGDMKKVLSVDIEA 276 (538)
T ss_pred HHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhHHHHhhcCHhhhhhccccccccccch
Confidence 6666665544433322 1223489888888888877766665 677754311 0 00000000 00
Q ss_pred ------------hh---hHHhcc---hhHHHHHHHHHHhhhhhhhhhhhhhccccCCC-ccCCch---------hHHHHH
Q 012629 238 ------------GA---AVAIAS---DEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEIPH---------GFIFAT 289 (459)
Q Consensus 238 ------------~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~ 289 (459)
.. +...+. -++++..+...++...++|. ...+...+++. +...+. +....+
T Consensus 277 ~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~-~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~i 355 (538)
T KOG0252|consen 277 ESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYG-QNLFQSVIFSAIGVIPSANTYHELFKVAEGNLI 355 (538)
T ss_pred hhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cccHHHHHHHhhccCCCcchHHHHHHHHHHHHH
Confidence 00 001111 12333334445555555555 24444444431 111111 111222
Q ss_pred HH-HHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHH-hhhcc
Q 012629 290 FM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE-ACVGI 367 (459)
Q Consensus 290 ~~-~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g-~~~~~ 367 (459)
.. .+.++|..+...++|++||++ +.+.++.+..+..+.+....+.. . +.. ..++...+.. ++.-.
T Consensus 356 ia~~~~vPGyw~tv~~id~iGRk~--iq~~GF~~~~i~~~~~~~~y~~~------~-~~~----Gf~v~y~l~~ff~NFG 422 (538)
T KOG0252|consen 356 IAVCSTVPGYWFTVYFIDIIGRKY--IQLMGFFIMTIFFFVIAGPYNQL------E-NTI----GFVVLYSLTFFFGNFG 422 (538)
T ss_pred HHHHccCCceeEEEEEeehhhhHH--HHHhhHHHHHHHHHHHcCCcccc------c-ccC----ceeehHHHHHHHHhcC
Confidence 22 345668888899999999998 35566666666555544433320 1 111 2222222222 23333
Q ss_pred hhhHHHHHHhccCChhhhhhhhhhhhhh--hhHHHHHhh--hccC-----cchhHHHHHHHHHHHHHHHHHHhhhhcccC
Q 012629 368 FWPSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCVVL--YNVD-----AFPITVMFGMCSIFLLVASVLQRRLMVIAD 438 (459)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~~l--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (459)
.......+.+|.+|++.|++..|+.... .+.+++... .... ..+....+.+.+.+.....+.....++.++
T Consensus 423 Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 423 PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred CCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 4466778899999999999999997764 444555333 2222 234566666666666666666655554433
No 92
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.86 E-value=3.6e-19 Score=169.98 Aligned_cols=348 Identities=13% Similarity=-0.006 Sum_probs=195.6
Q ss_pred hhhhccchhhhhhhccCCCccchhhH--HHHHHHHhhhhhccc-cchhcccCcchhhHHHHHHH-HHH-HHHh-h--CCc
Q 012629 52 GDWLQGPYVYYLYSTYGFGKGEIGQL--FIAGFGSSMLFGTIV-GSLADKQGRKRACVTYCLTY-ILS-CITK-H--SPQ 123 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~~s~~~~g~~--~~~~~~~~~l~~~~~-G~l~Dr~Grr~~~~~~~~~~-~~~-~l~~-~--~~~ 123 (459)
..++..|++|...+|.|.|.+++|.+ ....+....+.+|++ ++..||+||||.+++...+. +.. ...+ + ..+
T Consensus 16 ~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~ 95 (390)
T TIGR02718 16 PIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVA 95 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchh
Confidence 44555899999999999999999986 355677777888887 55899999999976665432 222 1222 2 222
Q ss_pred -hHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchh
Q 012629 124 -YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFD 202 (459)
Q Consensus 124 -~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~ 202 (459)
...++..-++.++..+...+..+. +..|.. |++..+. .+.....|..+|..+++...+++.++ ++||.+|+
T Consensus 96 ~~~~~~~~~~~~~~~~a~~d~~~d~-~~~~~~-~~~~~~~----~~~~~~~g~~lG~~~g~~~~~~l~~~--~gw~~~f~ 167 (390)
T TIGR02718 96 GAGWAVGLLACASLASATQDIATDG-MAAEHF-NGRTLAK----GNAVQIAGVMIGFFGGGAGTLVLFGK--FGQRPAFL 167 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhC-CHhhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHH--hCHHHHHH
Confidence 233344445555666666666555 544442 2222222 22233445566777777666666654 45678898
Q ss_pred hHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCc
Q 012629 203 AAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP 282 (459)
Q Consensus 203 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (459)
+.+.+.++..+......|+++++++++++ ..++.++.+|+|+.+.......+....... ...+.+.|.++ .|.+
T Consensus 168 ~~a~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~l~~-~G~s 241 (390)
T TIGR02718 168 LVACVPLASLVCVLWLKDRAVASPEAPLA----RRASLFRFFRRPLAWSLLALALLSAMTAVS-GFGLSKLYLVD-AGWP 241 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCCcCccccchh----hHHHHHHHHcCcCHHHHHHHHHHHHHHHHH-HHHHhhHHHHh-cCCC
Confidence 88877766555544333332221111111 122345677777766655555554444333 34566777765 4665
Q ss_pred h---hHHHHHHH-HHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHH
Q 012629 283 H---GFIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGF 358 (459)
Q Consensus 283 ~---~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (459)
. +....... ...+++..+.|++.||+|+|+. +..+..+................ ....+......
T Consensus 242 ~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~--l~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 310 (390)
T TIGR02718 242 LEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRT--FILGVGLAGSLALLWFAQAAFWL---------APGIAVAWSCS 310 (390)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHHHccc---------CCcHHHHHHHH
Confidence 5 44444444 3566778899999999998872 33333332222222111111100 00001222333
Q ss_pred HHHHhhhcchhhHHHHHHhccCCh-hhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q 012629 359 CTFEACVGIFWPSIMKMRSQYIPE-EARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVA 426 (459)
Q Consensus 359 ~l~g~~~~~~~~~~~~~~~~~~p~-~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 426 (459)
.+.++..+...+..++...+..++ +.+++.+++.+.. .++.+++.+.+.. ++...+..+++..+.+
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~--G~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF--GYAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHH
Confidence 444556677777777777777766 7788887776652 3445555555543 4445555554444443
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.86 E-value=9.9e-21 Score=168.23 Aligned_cols=231 Identities=20% Similarity=0.216 Sum_probs=172.5
Q ss_pred hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhh
Q 012629 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFS 143 (459)
Q Consensus 65 ~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (459)
++.+-+++++|+++..-.....+.+|+.|.+.||+|+|..+++|+..+..++ +.++.++|++++++|.+||+|.+...+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 4566788899999999989899999999999999999999999999999987 679999999999999999999999999
Q ss_pred hhhhhhhhhc----cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhc
Q 012629 144 AFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW 219 (459)
Q Consensus 144 ~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~ 219 (459)
+..+ +++|. ++|++.++..- .+.++|.++||++++.+.+..| .+.+|.+.+++.++-..+.+..+
T Consensus 179 sgla-mlAd~f~~d~er~~vmGial--------gfislG~lvgPpfGGilYe~~G--k~aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 179 SGLA-MLADVFPEDNERGSVMGIAL--------GFISLGVLVGPPFGGILYEFAG--KSAPFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred hhHH-HHHHHcccchhhhHHHHHHH--------HHHhccceecCCcccchHhhcC--CcCcHHHHHHHHHHHHHHHHhee
Confidence 9877 76665 44555554322 2455788889999999887654 46899999999988877777555
Q ss_pred cccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccC---CchhHHHHHHHHHHHH
Q 012629 220 TENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASML 296 (459)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 296 (459)
+.++.++++.++ ....+.++++|..+.........+.. ..+..--++.+..+.+. +..|..+....+...+
T Consensus 248 ~p~~~~~~~~~~-----~~~~~~Ll~dP~I~~~agai~~~n~~-lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~i 321 (464)
T KOG3764|consen 248 EPTEMDPDSTEQ-----GTPMWSLLMDPYILLIAGAITFSNSS-LAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAI 321 (464)
T ss_pred CccccCcccccc-----CccHHHHHhCchHhhhhcchhhccch-HHHhCcccHHHHHHhccCCCcceeeeecccccchhc
Confidence 543333322111 23455678888877766555554444 22233333344444443 3447777778889999
Q ss_pred HHHHHHHHhhcCCCCc
Q 012629 297 GSSLASRLMARSPPRV 312 (459)
Q Consensus 297 ~~~~~g~l~dr~g~~~ 312 (459)
++.+.|.+.||+++.+
T Consensus 322 g~~lfg~la~k~~~~~ 337 (464)
T KOG3764|consen 322 GTNLFGKLADKYPHLR 337 (464)
T ss_pred cCchHHHHHHhcCchh
Confidence 9999999999998555
No 94
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.6e-20 Score=181.16 Aligned_cols=365 Identities=14% Similarity=0.173 Sum_probs=246.1
Q ss_pred cchhhHHHHHHHHHHHH-hhhhc---cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHH
Q 012629 35 FNSFKNNYLLVYSLMMA-GDWLQ---GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (459)
Q Consensus 35 ~~~~~~~~~~~~~~~~~-~~~~~---~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~ 110 (459)
...+.|.+.+..++... .+++. +.+.+.+.++++-+.++++|+.++......+.+|+.+.+.||+|.|++.+.+.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 45567877777766655 34444 556678889999999999999999999899999999999999999999999999
Q ss_pred HHHHHH-HHhhCCchHHHH-HHHHHHHhHhhhhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 012629 111 TYILSC-ITKHSPQYKILM-IGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (459)
Q Consensus 111 ~~~~~~-l~~~~~~~~~l~-~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (459)
+..++. +.++++++|+++ ..-++.|+|.+..+..... ++..+ ++|+...+ ....|.++|..+-|.+.
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiv-iv~~YF~kkR~lA~G--------ia~~GsG~G~~~~~~l~ 190 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVV-ILGTYFEKKRALATG--------IAVSGTGVGTVVFPPLL 190 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhh-hhhhHhHHHHHHHHh--------hhhccCCcceeeHHHHH
Confidence 999997 669999998775 5678899999999888755 77777 44554333 44557889999999999
Q ss_pred hhcccccCCccccchhhHHHHHHHHHHHHHhhccccCC-------------------------C----CC-ch------h
Q 012629 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG-------------------------D----PS-ES------K 230 (459)
Q Consensus 187 ~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~-------------------------~----~~-~~------~ 230 (459)
..+.+..||+ ..+++.+.+.+-.+.......|...+ + .+ .. +
T Consensus 191 ~~l~~~~G~r--~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (509)
T KOG2504|consen 191 KYLLSKYGWR--GALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNL 268 (509)
T ss_pred HHHHHHhCcH--HHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccch
Confidence 9988776664 55655555554433333333330000 0 00 00 0
Q ss_pred hH-------HH--HHHhhh----HHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCC---chhHHHHHHHHHH
Q 012629 231 DL-------LT--QFRGAA----VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---PHGFIFATFMLAS 294 (459)
Q Consensus 231 ~~-------~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 294 (459)
+. .+ ..+... .++++++.++.+++...+...+.+. ...++|.|.++ .+. +.+.+.++.++..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~-p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~ 346 (509)
T KOG2504|consen 269 ATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNV-PFVYLPSYAKS-LGLSSNDAAFLLSIIGVSD 346 (509)
T ss_pred hhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhh-cCCChhhhHHHHHHHHHhh
Confidence 00 00 001111 3678888888888887777777666 47778887763 333 2368888999999
Q ss_pred HHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHH
Q 012629 295 MLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMK 374 (459)
Q Consensus 295 ~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 374 (459)
++++++.|++.|+...++..+..++....++........... +.+....+++|++.+........
T Consensus 347 i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~---------------~~l~~~~~~fG~~~g~~~~l~~~ 411 (509)
T KOG2504|consen 347 IIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTY---------------VGLIVFSILFGFCVGSFSSLTPV 411 (509)
T ss_pred hhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccH---------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987555333333333333333222222222 35667778889998887788888
Q ss_pred HHhccCChhhhhhhhhhhhhh--hhHH----HHHhhhccCcchhHHHHHHHHHHHHHHHH
Q 012629 375 MRSQYIPEEARSTIMNFFRIP--LNIF----VCVVLYNVDAFPITVMFGMCSIFLLVASV 428 (459)
Q Consensus 375 ~~~~~~p~~~r~~~~g~~~~~--~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 428 (459)
.+.|..+.+.-..++|+..+. .+.+ +.+.+.+.++ .|...+..+++..+++..
T Consensus 412 i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg-~Y~~~f~~~g~~~~~s~~ 470 (509)
T KOG2504|consen 412 ILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG-NYDHAFYFCGLCFLLSAV 470 (509)
T ss_pred HHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC-CeeeehhhcChHHHHHHH
Confidence 999999999988888776653 2222 2234444443 244455555555554443
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.85 E-value=2e-20 Score=186.94 Aligned_cols=266 Identities=13% Similarity=0.141 Sum_probs=178.2
Q ss_pred hhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCC---------
Q 012629 53 DWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP--------- 122 (459)
Q Consensus 53 ~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~--------- 122 (459)
.++..+.++.+.++|+++.++.|++.+...+...+..++.|+++||+||||.+.++.++++++. +.++.+
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 3444778889999999999999999888888788888899999999999999999999999976 445432
Q ss_pred ------------------------------------------chHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccch
Q 012629 123 ------------------------------------------QYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQ 160 (459)
Q Consensus 123 ------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~ 160 (459)
.+..++++|+++|+|.+...+...+ ++.|+.++.++.
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~-~i~d~~~~~~~~ 207 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS-YIDDFAKSKNSP 207 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch-hhhccCCccccH
Confidence 2456789999999999999999876 999984333333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhccccc-C---------------Cc----cccchhhHHHHHHHHHHHHHhhcc
Q 012629 161 QWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-S---------------LG----PVAPFDAAACFLAIGMVIILSSWT 220 (459)
Q Consensus 161 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~-~---------------~~----w~~~f~~~~~~~~i~~~~~~~~~~ 220 (459)
.... ....... +|+.+++++++.+.+.. + ++ |+..|++.+++.++..+..+ .+|
T Consensus 208 ~~~~-i~~~~~~----iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~~p 281 (633)
T TIGR00805 208 LYIG-ILESIAV----FGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-FFP 281 (633)
T ss_pred HHHH-HHHHHHH----hhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hCc
Confidence 2222 2222333 44444444444443221 1 22 66678777776666544433 444
Q ss_pred ccCCCCC--------chh--------------hHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCc
Q 012629 221 ENYGDPS--------ESK--------------DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (459)
Q Consensus 221 ~~~~~~~--------~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (459)
++.++.+ +.+ +..++..+..+.+++||.++...+...+.....+. ...|.|.|+++.
T Consensus 282 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~-~~~~lP~yl~~~ 360 (633)
T TIGR00805 282 KALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNG-YITFLPKYLENQ 360 (633)
T ss_pred cccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 4322110 000 00112233466788999998888877777777666 578999999988
Q ss_pred cCCch---hHHHHHHHH-HHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHH
Q 012629 279 EEIPH---GFIFATFML-ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (459)
Q Consensus 279 ~~~~~---~~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~ 326 (459)
++.++ +.+.....+ +.+++.+++|+++||++.+..+.+..+.....+.
T Consensus 361 ~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 361 YGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred cCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 88876 344444444 5678999999999999866544444444433333
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.84 E-value=9.5e-18 Score=160.01 Aligned_cols=379 Identities=15% Similarity=0.101 Sum_probs=215.8
Q ss_pred HHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhc----ccCcchhhHHHHHHH-HHHH-HHhhCC
Q 012629 49 MMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACVTYCLTY-ILSC-ITKHSP 122 (459)
Q Consensus 49 ~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~~~~~~~~~-~~~~-l~~~~~ 122 (459)
..++..++.++++.+.+++|.+..+.+.+..+..+.+.+..|+.|+++| |+||||.++.+.... .++. +.++++
T Consensus 16 iq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~ 95 (477)
T TIGR01301 16 VQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAA 95 (477)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 3446666688888888999999999999999999999999999999999 599999998864444 4454 556666
Q ss_pred chH-----------------HHHHHHHHHHhHhhhhhhhhhhhhhhhcc-ccccchhhHHHHHHHHHHHHHHHHHHHhhh
Q 012629 123 QYK-----------------ILMIGRILGGIATSLLFSAFESWLVAEHN-KRGFEQQWLSITFSKAIFLGNGLVAILSGL 184 (459)
Q Consensus 123 ~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~~i~~~~-~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 184 (459)
+.. ..+++-.+..++.....+...+ ++.|.. ++.++.+......+....+|+.+|..++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rA-LiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~ 174 (477)
T TIGR01301 96 DIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRA-FLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY 174 (477)
T ss_pred hhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543 2222233344477767677655 888872 222222222223333444455555554443
Q ss_pred hh--h---hc----ccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCch------h---h--HHHHHHhhhHHhc
Q 012629 185 FG--N---LL----VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES------K---D--LLTQFRGAAVAIA 244 (459)
Q Consensus 185 l~--~---~l----~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~---~--~~~~~~~~~~~~~ 244 (459)
.. . .. ......+.+..|++.+++.+++........+|++..+++. + + ..+..++-++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 254 (477)
T TIGR01301 175 SGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFK 254 (477)
T ss_pred HhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHH
Confidence 21 0 00 0001125577898888888888777777777754311110 0 0 0111122222333
Q ss_pred ch-hHHHHHHHHHHhhhhhhhhhhhhhccccCC-CccCC--------chh-----HHHHHHHHHHHHHHHHHHHHhhcCC
Q 012629 245 SD-EKIALLGAIQSLFEGSMYTFVFLWTPALSP-NDEEI--------PHG-----FIFATFMLASMLGSSLASRLMARSP 309 (459)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~-----~~~~~~~~~~~~~~~~~g~l~dr~g 309 (459)
+- |..+.++...++...+.+.+ ..|.+.+.. +.++. +.| +....+.+...+.+++..++.+|+|
T Consensus 255 ~mP~~m~~l~~vqffsW~a~f~~-~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g 333 (477)
T TIGR01301 255 YLPRPVWILLLVTCLNWIAWFPF-ILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWG 333 (477)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHH-HHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 32 45666677777777777765 444444432 32322 112 2334444556677788899999998
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhccC---CCCCCCCCcccc---chhHHHHHHHHHhhhcchhhHHHHHHhccCChh
Q 012629 310 PRVESYMQIVFVVSSVSLLLPIVTSFLVA---PSNVKSGGISFS---GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE 383 (459)
Q Consensus 310 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~ 383 (459)
+|+. ....+..+.++++....+.....+ +.+.++..+... .+..++.+.+.|+..+..+...++++++..|++
T Consensus 334 ~~k~-~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~ 412 (477)
T TIGR01301 334 AGKR-LWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL 412 (477)
T ss_pred cchh-HHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc
Confidence 6441 223444444444444443332100 000000001100 145667788889999999999999999999965
Q ss_pred h--hhhhhhhhhhhh-------hHHHHHhhhccCcchhHHHHHHHHHHHHHHHHHHh
Q 012629 384 A--RSTIMNFFRIPL-------NIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQR 431 (459)
Q Consensus 384 ~--r~~~~g~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (459)
. .|..+|+.|... +...|. +....+.+....+...++..+++.+...
T Consensus 413 ~~~~G~~mgilN~~I~lpQii~sl~~g~-~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 413 GAGQGLSMGVLNLAIVIPQIIVSLGSGP-WDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHH-HHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 4 477788888742 222222 3233233344455555565555544433
No 97
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=1.5e-19 Score=158.84 Aligned_cols=330 Identities=15% Similarity=0.102 Sum_probs=197.6
Q ss_pred ccchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHH
Q 012629 34 AFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (459)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~ 109 (459)
++.+++|..........+.+.+. .-+.|...+.+|.+..|...+....+....+++..+|.++|++|||+.+.+..
T Consensus 71 gfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 71 GFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred CcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 36778888887777777666655 33334555778888888888888777777788889999999999999999998
Q ss_pred HHHHHH-HHHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q 012629 110 LTYILS-CITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (459)
Q Consensus 110 ~~~~~~-~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (459)
....+. .+.+.++|+..+.+.|.+.|+|.|+ .|...+ +-.|. .+|.... ... .-+.+|.+....+
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~-~yle~lp~~~r~~~~--------V~~-~~waig~v~ea~l 219 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSA-IYLEFLPSSHRWLLT--------VMS-FFWAIGQVFEALL 219 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHH-HHHHhccCcCCCcch--------hHH-HHHHHHHHHHHHH
Confidence 888774 5779999999999999999999999 677655 44444 2233221 111 3456777777777
Q ss_pred hhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCC------CCCchhhHHHHHHh---------------------
Q 012629 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG------DPSESKDLLTQFRG--------------------- 238 (459)
Q Consensus 186 ~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--------------------- 238 (459)
.-....+.||||++.+.. ..+.+. ..+ .++.||+++ +++++-+..+++.+
T Consensus 220 aw~vm~~~gwr~~l~~~~-~pl~~~-a~f-~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~ 296 (528)
T KOG0253|consen 220 AWGVMSNFGWRYLLFTSS-TPLMFA-ARF-LVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQ 296 (528)
T ss_pred HHHHHHhhhHHHHHHHHH-hHHHHH-HHH-HhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhh
Confidence 777777777877643322 222222 222 235666432 11111111111100
Q ss_pred ------------------hhHHhcch---hHHHHHHHHHHhhhhhhhhhh----------------hhhccccCCCccCC
Q 012629 239 ------------------AAVAIASD---EKIALLGAIQSLFEGSMYTFV----------------FLWTPALSPNDEEI 281 (459)
Q Consensus 239 ------------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~ 281 (459)
....++.. +..+.+....+......|+.+ +-..|.+.+...+-
T Consensus 297 e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c 376 (528)
T KOG0253|consen 297 EESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANC 376 (528)
T ss_pred hhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcC
Confidence 00111110 111111111111122222211 11222222221111
Q ss_pred ----chh-HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHH
Q 012629 282 ----PHG-FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLL 356 (459)
Q Consensus 282 ----~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (459)
... .-..+..+....|.++.+++.||+|||+. +.....+.++..+.+...... .....
T Consensus 377 ~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT--Mal~l~~f~iflfll~~c~~r---------------n~~tv 439 (528)
T KOG0253|consen 377 PLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT--MALSLILFGIFLFLLTTCKTR---------------NAYTV 439 (528)
T ss_pred CccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHhcCc---------------chhHH
Confidence 111 12345567899999999999999999984 555555554444333222111 13344
Q ss_pred HHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 357 GFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 357 ~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
..+...++....+...|.|..|.+|+..|+++.|.++.
T Consensus 440 llf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSs 477 (528)
T KOG0253|consen 440 LLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSS 477 (528)
T ss_pred HHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhh
Confidence 45556666667777889999999999999999988775
No 98
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=1.6e-18 Score=153.40 Aligned_cols=306 Identities=16% Similarity=0.147 Sum_probs=172.5
Q ss_pred hhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhh
Q 012629 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAE 152 (459)
Q Consensus 74 ~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~ 152 (459)
.|.+.+...+...+.++.+|.++||+|||++++++++..+++. +.+.+.|+..++++|++.|+..|.....- + +++|
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~r-A-iisd 147 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIR-A-IISD 147 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHH-H-HHHh
Confidence 4566666777777888999999999999999999999999986 66999999777777999999999886653 5 8888
Q ss_pred c---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHH----HHHHHHHhhccccCCC
Q 012629 153 H---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA----IGMVIILSSWTENYGD 225 (459)
Q Consensus 153 ~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~----i~~~~~~~~~~~~~~~ 225 (459)
. ++|+..++..... .. +|.++||.+++++.+..+-.-.++|.....+.. ...+....++||+-+.
T Consensus 148 V~sek~r~l~ms~v~~a----~~----lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~ 219 (451)
T KOG2615|consen 148 VVSEKYRPLGMSLVGTA----FG----LGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPL 219 (451)
T ss_pred hcChhhccceeeeeehh----hh----cchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 7 6677766644443 33 444444444454443111111244444332222 2133334577886443
Q ss_pred CCch---hhHHHHH---Hh--hh-----HHhcchhHHHH------HHHHHHhhhhhhhhhhhhhccccCCCccCCch---
Q 012629 226 PSES---KDLLTQF---RG--AA-----VAIASDEKIAL------LGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH--- 283 (459)
Q Consensus 226 ~~~~---~~~~~~~---~~--~~-----~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 283 (459)
+++. .+..+.. .+ .. -...||++... .....-+.+...+....+..+.+.+++++.++
T Consensus 220 rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~ 299 (451)
T KOG2615|consen 220 RKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQ 299 (451)
T ss_pred hhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhh
Confidence 3322 1111100 00 00 01223332211 11111112222233334444555567777755
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
|.+++..++.+. ++.+.+..|..|.+.. ..+.....+.++.+.+......+ . ...+..+..+..+
T Consensus 300 G~vl~~tGl~m~---~~ql~~~~~l~~~~~~--~~a~l~~~l~~~vP~~llls~~~------~----~~~l~~~s~l~sf 364 (451)
T KOG2615|consen 300 GKVLSTTGLLML---VIQLALVPILPRYKGN--IKAVLLFSLLLIVPAFLLLSLAR------T----PVVLYLGSTLKSF 364 (451)
T ss_pred eeeeehhhHHHH---HHHHhccccccccccc--hhhHHHHHHHHHHHHHHHHhccc------c----chhhhHHHHHHHH
Confidence 455554444444 4444444444333210 12222223333333332222100 0 1256777888888
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhh------hhhHHHHHhh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRI------PLNIFVCVVL 404 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~------~~~~~~~~~l 404 (459)
......+....++....|+++||+..|+.+. ..++.+++.+
T Consensus 365 ~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i 411 (451)
T KOG2615|consen 365 STASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVI 411 (451)
T ss_pred HHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhee
Confidence 8888889999999999999999999988776 2555666444
No 99
>PRK09669 putative symporter YagG; Provisional
Probab=99.82 E-value=1.7e-17 Score=161.01 Aligned_cols=297 Identities=13% Similarity=0.114 Sum_probs=170.7
Q ss_pred hhhhccCCCccchhhHHHHHHHHhhhhhccccchhcc----cCcchh-hHHHHHHHHHHH-HHhhCCc------hHHHHH
Q 012629 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRA-CVTYCLTYILSC-ITKHSPQ------YKILMI 129 (459)
Q Consensus 62 ~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~-~~~~~~~~~~~~-l~~~~~~------~~~l~~ 129 (459)
...+++|+++.++|.++.+..+...+..|+.|+++|| +||||. ++.+.+..+++. +....++ ...+++
T Consensus 35 ~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~ 114 (444)
T PRK09669 35 FYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACV 114 (444)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 3447899999999999999999999999999999998 787555 556666666654 3333433 334555
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhc----cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhccc-ccCCccccchhhH
Q 012629 130 GRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPVAPFDAA 204 (459)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~-~~~~~w~~~f~~~ 204 (459)
..++.+.+......+..+ +.+|. ++|.+..+ .......+|..+++.+..++...+.+ ....+|+..+.+.
T Consensus 115 ~~~l~~~~~t~~~ip~~a-l~~~~t~~~~eR~~l~~----~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~ 189 (444)
T PRK09669 115 TYILLSLVYTAINVPYCA-MPGAITNDPRERHSLQS----WRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVM 189 (444)
T ss_pred HHHHHHHHHHhhcchHHH-hHHHhcCCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 566666666655555444 66665 33333223 22223344444554444333333221 1123567667666
Q ss_pred HHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch-
Q 012629 205 ACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH- 283 (459)
Q Consensus 205 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (459)
+++..+..+......+|+.+++++++ ++..+..+.+++||+++.+.....+....... .....+.|.+...+.+.
T Consensus 190 ~ii~~v~~~~~~~~~~e~~~~~~~~~---~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~~ 265 (444)
T PRK09669 190 GLLGVVLFFCCFFMTKERYTPEVDNS---SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVT-RGGATLYYVNYVLLRPDL 265 (444)
T ss_pred HHHHHHHHHHHhCCeEEecCCCCcCC---CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HhhhhheeeeeecCCHHH
Confidence 66666655555444555432222111 12344566778888877765554443333221 22233333333333222
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHH
Q 012629 284 -GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (459)
Q Consensus 284 -~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (459)
+.......+..+++.++.+++.||+|+|+. ...+.....+......+.... + .+...+..++.+
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~--~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~i~g 330 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRA--FKWTIVAFVILSALIFFIPPS---------N----VWLIFALNILFN 330 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHH--HHHHHHHHHHHHHHHHHhCcc---------h----HHHHHHHHHHHH
Confidence 334444557778888999999999998772 333333222222211111111 0 124566667889
Q ss_pred hhhcchhhHHHHHHhccCCh
Q 012629 363 ACVGIFWPSIMKMRSQYIPE 382 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~ 382 (459)
++.+...+..++..+|..+.
T Consensus 331 ~~~~~~~~~~~am~ad~~d~ 350 (444)
T PRK09669 331 FIQNLTTPLQWSMFSDVVDY 350 (444)
T ss_pred HHHHHHHHHHHHHHHhhhhh
Confidence 99998889999999999864
No 100
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.80 E-value=9.5e-17 Score=155.27 Aligned_cols=312 Identities=13% Similarity=0.060 Sum_probs=184.9
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
...++.+..|+|-+ ....|+.....+...+..++.|+++|.+|||..++.+.++..+|. +++.++|...++.+..+.|
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G 142 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence 56677888999865 566677777777777888899999999999999999999999987 6799999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~ 215 (459)
+|.|...... . .++|..+++++.-. .. ............++.++..+..+.+ ||+.|++..+...+.++..
T Consensus 143 vgaG~~~~~~-~-~isEl~p~k~R~~~----~~-~~~~~~i~~~~~~~~ia~~~~~~~~--WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 143 VGAGVQELAA-L-AISELVPNKWRGLG----LA-IASIPFIITTWISPLIAQLFAAHSG--WRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HhhHHHHHHH-H-HHHHhcccchhhhH----hH-HHHHHHHhhhcccHHHHHHhccCCC--cchHHHHHHHHHHHHHHHH
Confidence 9988776442 3 57887333333211 11 1122222333345566665554444 5566777776666555443
Q ss_pred H-hhccccCCC-CC---chhhHHHHHH-------------------------hh--------------------------
Q 012629 216 L-SSWTENYGD-PS---ESKDLLTQFR-------------------------GA-------------------------- 239 (459)
Q Consensus 216 ~-~~~~~~~~~-~~---~~~~~~~~~~-------------------------~~-------------------------- 239 (459)
. +..|+++++ +. ..++..+++. .+
T Consensus 214 ~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~ 293 (599)
T PF06609_consen 214 FFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWF 293 (599)
T ss_pred HHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhh
Confidence 3 233433211 11 1111111110 00
Q ss_pred --------hHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCC------chhHHHHHHHHHHHHHHHHHHHHh
Q 012629 240 --------AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI------PHGFIFATFMLASMLGSSLASRLM 305 (459)
Q Consensus 240 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~g~l~ 305 (459)
..+++|++|.+...+...+.....+.....+.|......++. ..+......+++...+..+.+.+.
T Consensus 294 ~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~ 373 (599)
T PF06609_consen 294 GAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLF 373 (599)
T ss_pred ccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHH
Confidence 012455545444443333333333333445556544333322 235666677788888888899999
Q ss_pred hcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhh
Q 012629 306 ARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEAR 385 (459)
Q Consensus 306 dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r 385 (459)
.|++|-|. .+..+.......+.++...... +. . ..+...++.+++.|.........++-..|++.-
T Consensus 374 ~~ir~~Kw-~li~~~~~~ta~~Gama~~~~~-n~--------~----~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~i 439 (599)
T PF06609_consen 374 SKIRHIKW-QLIFGSVLMTAFCGAMAAVRPD-NK--------N----AAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDI 439 (599)
T ss_pred HHccchhH-HHHHHHHHHHHHHHHHHHccCC-Cc--------c----hHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHH
Confidence 88875552 2333433333333332222111 11 1 234556677778877777777778888899887
Q ss_pred hhhhhhh
Q 012629 386 STIMNFF 392 (459)
Q Consensus 386 ~~~~g~~ 392 (459)
+++.|+.
T Consensus 440 g~a~gL~ 446 (599)
T PF06609_consen 440 GTATGLT 446 (599)
T ss_pred HHHHHHH
Confidence 7776443
No 101
>PRK09848 glucuronide transporter; Provisional
Probab=99.80 E-value=6.9e-17 Score=157.06 Aligned_cols=313 Identities=11% Similarity=0.023 Sum_probs=175.7
Q ss_pred cchhhhh-hhccCCCccchhhHHHHHHHHhhhhhccccchhccc----Ccchhh-HHHHHHHHHHH-HH-hh----CCc-
Q 012629 57 GPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ----GRKRAC-VTYCLTYILSC-IT-KH----SPQ- 123 (459)
Q Consensus 57 ~p~l~~~-~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~----Grr~~~-~~~~~~~~~~~-l~-~~----~~~- 123 (459)
.++++.. .+.+|+++.++|.+.+...+...+..|+.|+++||. ||||.+ ..+.+...+.. ++ .. .++
T Consensus 28 ~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (448)
T PRK09848 28 ALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSS 107 (448)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcch
Confidence 4554433 356799999999999999999999999999999996 777755 45555444432 22 11 111
Q ss_pred -hHHHHHHHHHHHhHhhhhhhhhhhhhhhhc----cccccchhhHHHHHHH-HHHHHHHHHHHHhhhhhhhcccccCCcc
Q 012629 124 -YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSK-AIFLGNGLVAILSGLFGNLLVDSFSLGP 197 (459)
Q Consensus 124 -~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~-~~~~g~~~g~~~~~~l~~~l~~~~~~~w 197 (459)
....+..-.+.+++.+...+...+ +..|. ++|....+......+. +...+..+++.+++..++. ...+|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~----~~~~~ 182 (448)
T PRK09848 108 KVVYAYLTYMGLGLCYSLVNIPYGS-LATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEE----MVSVY 182 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHhh-hhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc----hhhhH
Confidence 122344456677777777765544 43433 4444332222111111 1223333444443322211 01111
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCC
Q 012629 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (459)
Q Consensus 198 ~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (459)
.....+.+++..+..+......||+.++++++. ...+.++.+++||+++.......+....... .....|.|.++
T Consensus 183 ~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~----~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 257 (448)
T PRK09848 183 HFWTIVLAIAGMVLYFICFKSTRENVVRIVAQP----SLKISLQTLKRNRPLFMLCIGALCVLISTFA-VSASSLFYVRY 257 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEeccCCCccCC----CHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HhhhheeeEee
Confidence 111122223333333333334565533222211 2344566788999988877666666555444 35567778777
Q ss_pred ccCCch--hHH-HHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhH
Q 012629 278 DEEIPH--GFI-FATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (459)
Q Consensus 278 ~~~~~~--~~~-~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (459)
..+.+. +.. .....++.+++.++.+++.||+|+|+ .+..+..+..+......+... .+ .+..
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~--~~~~g~~~~~i~~~~~~~~~~---------~~----~~~~ 322 (448)
T PRK09848 258 VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN--TFLIGALLGTCGYLLFFWVSV---------WS----LPVA 322 (448)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHcCc---------hh----HHHH
Confidence 766644 222 22234567788899999999999876 344454444444333222110 01 1244
Q ss_pred HHHHHHHHhhhcchhhHHHHHHhccCChhh-------hhhhhhhhhh
Q 012629 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEA-------RSTIMNFFRI 394 (459)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~-------r~~~~g~~~~ 394 (459)
.....+.+++.+...+..++..+|..|.++ +|...|+.++
T Consensus 323 ~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 323 LVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence 556677888999888999999999887653 4666666665
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.80 E-value=6e-17 Score=158.22 Aligned_cols=308 Identities=14% Similarity=0.136 Sum_probs=169.8
Q ss_pred cchhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhc----ccCc-chhhHHHHHHHHHHH-HHhhCCc------
Q 012629 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGR-KRACVTYCLTYILSC-ITKHSPQ------ 123 (459)
Q Consensus 57 ~p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~D----r~Gr-r~~~~~~~~~~~~~~-l~~~~~~------ 123 (459)
.++++..+ +.+|+++.++|.++.+.-+...+..|+.|.++| |+|| |+.++.+.+..+++. ++-..++
T Consensus 26 ~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~ 105 (473)
T PRK10429 26 YMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQ 105 (473)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHH
Confidence 55555555 556999999999999999999999999999999 6698 555556776667664 3322221
Q ss_pred hHHHHHHHHHHHhHhhhhhhhhhhhhhhhc----cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhccc-ccCCccc
Q 012629 124 YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPV 198 (459)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~-~~~~~w~ 198 (459)
+..+++.-++.+++.........+ +..|. ++|.+..++... ...+|..++..+...+....-. ...-+|+
T Consensus 106 ~~~~~~~~~l~~~~~t~~~ip~~a-l~~~lt~~~~eR~~l~~~~~~----~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~ 180 (473)
T PRK10429 106 YVFVCVTYILWGMTYTIMDIPFWS-LVPTLTLDKREREQLVPYPRF----FASLAGFVTAGFTLPFVNYVGGGDRGFGFQ 180 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHh-hhHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 224445556666766666655544 55554 444443433222 2222222222222211111110 0111344
Q ss_pred cchhhHHHHHHHHHHHHHhhccccCCCCC--chhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCC
Q 012629 199 APFDAAACFLAIGMVIILSSWTENYGDPS--ESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (459)
Q Consensus 199 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (459)
....+.+++..+..+......+|+..+++ ++++...+.++..+.+++||.++.+.....+....... ...+.+.|.+
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~-~~~~~~y~~~ 259 (473)
T PRK10429 181 MFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNI-INGFAIYYFT 259 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HhhheeeEEE
Confidence 44455555555444444444566422111 11111122344556677888877766555555544333 3445555555
Q ss_pred CccCCch--hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhH
Q 012629 277 NDEEIPH--GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (459)
Q Consensus 277 ~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (459)
...+.+. +.......+..+++.++.+++.||+|+|+. +..+..+..+............ ..+ .+..
T Consensus 260 y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~--~~~~~~~~~~~~~~~~~~~~~~------~~~----~~~~ 327 (473)
T PRK10429 260 YVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRIL--WAGASIFPVLSCGVLLLMGLAA------PHN----ALLI 327 (473)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH--HHHHHHHHHHHHHHHHHHhccC------chh----HHHH
Confidence 4433222 445555567888999999999999998872 3333333222222221111110 000 1244
Q ss_pred HHHHHHHHhhhcchhhHHHHHHhccCCh
Q 012629 355 LLGFCTFEACVGIFWPSIMKMRSQYIPE 382 (459)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p~ 382 (459)
++...+.+++.+..++..+++.+|..|.
T Consensus 328 ~i~~~l~g~~~~~~~~~~~am~ad~id~ 355 (473)
T PRK10429 328 VIAGILLNIGTALFWVLQVIMVADTVDY 355 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 5566777888888888889999999764
No 103
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.79 E-value=3.3e-17 Score=151.50 Aligned_cols=324 Identities=13% Similarity=0.070 Sum_probs=183.8
Q ss_pred hHHHHHHHHHHHHhhhhccchhhhhhhc-cCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHH--H
Q 012629 39 KNNYLLVYSLMMAGDWLQGPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL--S 115 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~-~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~--~ 115 (459)
.|.+-...+...+..+...|+.+...++ .|+|.+++|.++++..+...+.+|+.|.++||+|.||-++.......+ +
T Consensus 9 ~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~ 88 (412)
T PF01306_consen 9 YWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFG 88 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHH
Confidence 3444455555556666678888777764 899999999999999999999999999999999977765544333221 2
Q ss_pred H-HH-hh----CCchH-HHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012629 116 C-IT-KH----SPQYK-ILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (459)
Q Consensus 116 ~-l~-~~----~~~~~-~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (459)
. .. .+ ..|.+ ..+++-+..|+......|..++ ++.+. ++.+...+..+.. ..+|+.++ ..++|
T Consensus 89 pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea-~~er~sr~~~feYG~~R~w----GSig~ai~----s~~~G 159 (412)
T PF01306_consen 89 PFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEA-YAERVSRRNGFEYGRARMW----GSIGFAIA----SLLAG 159 (412)
T ss_dssp HHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHH-HHHHHHHHHSS-HHHHHHH----HHHHHHHH----HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH-HHHHHHHHhcCCcchHHHH----hhHHHHHH----HHHhh
Confidence 2 11 22 12322 2223333344444444455544 44444 3334444433332 23334344 44444
Q ss_pred hcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCC---Cch-hhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhh
Q 012629 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---SES-KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (459)
Q Consensus 188 ~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (459)
.+.+ ++-...|++.....++..++.....|+.+++. +.. .+..+...++..+++|+|++|.+.+.........
T Consensus 160 ~L~~---i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y 236 (412)
T PF01306_consen 160 ILFN---INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIY 236 (412)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred eeee---eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 4432 22245577655554444444433333322211 111 1111111234557889999998876555444333
Q ss_pred hhhhhhhccccCCCccC-----Cc-hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhcc
Q 012629 264 YTFVFLWTPALSPNDEE-----IP-HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLV 337 (459)
Q Consensus 264 ~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 337 (459)
.. .....|.|....++ .. .|.+.+...+.+++.-.+..++.+|+|.|+ .+++...+..+=.....+....
T Consensus 237 ~v-fdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~--~Lllag~i~~iRi~~~~~~~~~- 312 (412)
T PF01306_consen 237 DV-FDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN--LLLLAGVIMAIRIIGSGFATNP- 312 (412)
T ss_dssp HH-HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHT--SH-
T ss_pred HH-HHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh--HHHHHHHHHHHHHHHHhhhcch-
Confidence 32 22223333332222 11 277778888889999999999999999887 3555555555444444443333
Q ss_pred CCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhh
Q 012629 338 APSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF 392 (459)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 392 (459)
+.+...-.+.++-.........-++++.+|++..++.+.+.
T Consensus 313 --------------~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 313 --------------WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHH
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Confidence 46677788999999988899999999999999988887664
No 104
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.79 E-value=4.5e-17 Score=161.41 Aligned_cols=300 Identities=15% Similarity=0.066 Sum_probs=188.8
Q ss_pred hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhh
Q 012629 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFS 143 (459)
Q Consensus 65 ~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (459)
+.++.+........++.+++..+++.++|+++||+|||++++.++++..++. ..++++|++.+++.|+++|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 5556666666677777777677777899999999999999999999999865 779999999999999999999999988
Q ss_pred hhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhcc
Q 012629 144 AFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWT 220 (459)
Q Consensus 144 ~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 220 (459)
.... ++.|. ++|+..... ....-.++.+++..++++.+ +||+.+++..+...+.++. ++..|
T Consensus 191 ~~~~-~~~E~~~~~~R~~~~~~---------~~~~~~~~~~~~~~~a~~~~----~Wr~~~~~~~~~~~~~~~~-~~l~~ 255 (521)
T KOG0255|consen 191 VGFG-LVAEIVSPKQRGLALTL---------GGFFFVGGLMLPAGAAYITR----DWRWLFWIISIPSGLFLLL-WFLPP 255 (521)
T ss_pred HhHh-hheeecCcchhhHHHHH---------HHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHH-HHccC
Confidence 8866 88888 333333221 11233445555566666553 5677788877777665544 32333
Q ss_pred ccC------CCCCchhhHHHHHH------------------------------hhhHHhcchhHHHHHHHHHHhhhhhhh
Q 012629 221 ENY------GDPSESKDLLTQFR------------------------------GAAVAIASDEKIALLGAIQSLFEGSMY 264 (459)
Q Consensus 221 ~~~------~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (459)
|.+ ++.+++.+..++.. ....++++.|+.....+...+.. ..+
T Consensus 256 Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~~ 334 (521)
T KOG0255|consen 256 ESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIW-FVF 334 (521)
T ss_pred cChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHH-HHH
Confidence 532 22222211111110 00112333333222222222222 112
Q ss_pred hhhhhhccccCCCccCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 265 TFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
. ..++.-.+.....+.+........+..........+...||.|||. ..........++++...+.....
T Consensus 335 ~-~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~--~~~~~~~~~~~~~~~~~~~~~~~------- 404 (521)
T KOG0255|consen 335 S-LVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRP--PLFLSLFLAGIGLLLFGWLPDDL------- 404 (521)
T ss_pred h-HHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHhhccc-------
Confidence 2 2333333444556666666666666778888888899999998887 35555555555555554444331
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
.. +...+...+..++.+..+...+.+..|.+|+..|..+.+..+..
T Consensus 405 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~ 450 (521)
T KOG0255|consen 405 GG-----WLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAA 450 (521)
T ss_pred hh-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 00 12344455555666667777799999999999999998887763
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.79 E-value=1.1e-16 Score=155.30 Aligned_cols=320 Identities=14% Similarity=0.052 Sum_probs=183.5
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccC-----cchhhHHHHHHHH-HHH-HHhhCCchHHH-H
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTYI-LSC-ITKHSPQYKIL-M 128 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~~~~~~~~~~-~~~-l~~~~~~~~~l-~ 128 (459)
.+..|.+.+++|+++++++...+...+...+ .+++|+++||++ ||+.++++.++.. ++. ..+..++.... .
T Consensus 46 ~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~ 124 (468)
T TIGR00788 46 LPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAA 124 (468)
T ss_pred hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 4555566678999999998777777664444 556999999998 7777777776663 332 22444554444 4
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHH
Q 012629 129 IGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (459)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~ 206 (459)
+..++.+++.+...++..+ +..|. ++++...+.+...+. . ..+|.++++.+++.+.+.. +|+..|++.+.
T Consensus 125 ~~~~l~~~~~a~~dv~~da-~~~e~~~~~~~~~~~~~s~~~~-~----~~~G~~vg~~l~G~l~~~~--~~~~~f~~~a~ 196 (468)
T TIGR00788 125 AFIFLAALAKALYDVLVDS-LYSERIRESPSAGPSLVSWMWG-A----SATGGLISSLLGGPLLDKT--LTRILFLITAA 196 (468)
T ss_pred HHHHHHHHHHHHHHHhHHH-HHhhhhhcCCCcCCCeeeHHHH-H----HHHHHHHHHHHHHHHHHhc--CcchHHHHHHH
Confidence 4889999999999888877 77766 333332222222222 1 2245555556666655433 56788888777
Q ss_pred HHHHHHHHHHhhccccCC--CCCchh-----------h---HHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhh
Q 012629 207 FLAIGMVIILSSWTENYG--DPSESK-----------D---LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLW 270 (459)
Q Consensus 207 ~~~i~~~~~~~~~~~~~~--~~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (459)
+.++... ....++|+++ +++..+ . ..++.....+..+++|+.+......++...........+
T Consensus 197 l~ll~~~-~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~ 275 (468)
T TIGR00788 197 LLLLQLF-VSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSV 275 (468)
T ss_pred HHHHHHH-HHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCcee
Confidence 7766633 3346677531 111100 0 011111233344666776654433333111111111111
Q ss_pred ccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q 012629 271 TPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGI 347 (459)
Q Consensus 271 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (459)
-.+.++..|.++ |......+++.+++....+++.+|++.|+ .+..+..+...+...........+. ....
T Consensus 276 -f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~--~l~~~~~l~~~~~~~~~~l~~~~~~----~~gi 348 (468)
T TIGR00788 276 -FCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL--LFGVTTLLYTLSSLFDLILVKRWNL----AFGI 348 (468)
T ss_pred -EEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH--HHHHHHHHHHHHHhCceeeeecccc----ccCC
Confidence 012233445544 67777888999999999999999998776 2444443333333221111100000 0000
Q ss_pred cccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 348 SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 348 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
. ..+.......+.+++.+..+.....++++..|++.+++.+++.+.
T Consensus 349 ~-~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s 394 (468)
T TIGR00788 349 S-DEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLAS 394 (468)
T ss_pred C-CeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHH
Confidence 0 012334456677788888887889999999999999999877666
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.78 E-value=2.6e-17 Score=158.98 Aligned_cols=301 Identities=17% Similarity=0.155 Sum_probs=194.9
Q ss_pred hhhhccCCCccchhhHHHHHHHHhhhhhccccchhc----ccCcchhhH-HHHHHHHHHH-HHhhC-C-------chHHH
Q 012629 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACV-TYCLTYILSC-ITKHS-P-------QYKIL 127 (459)
Q Consensus 62 ~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~~~-~~~~~~~~~~-l~~~~-~-------~~~~l 127 (459)
...+..|+++..+|.+..+.-+...+..|+.|.++| |+||||.++ .+.+..+++. ++... + ....+
T Consensus 27 f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~ 106 (428)
T PF13347_consen 27 FYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWL 106 (428)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHH
Confidence 444677999999999999999999999999999999 899776655 5667777765 33333 3 12234
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhc----cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC-Cccccchh
Q 012629 128 MIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LGPVAPFD 202 (459)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~-~~w~~~f~ 202 (459)
.+.-++..++......+..+ +..|. ++|.+..+. ......+|..+...+.+.+...+.+... .+|+....
T Consensus 107 ~~~~~l~~~~~t~~~i~~~a-l~~~lt~~~~~R~~l~~~----~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 107 FVFYILFDIAYTFVQIPYNA-LIPELTPDPDERTRLSSW----RMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHhhhhccCchhh-cCccccccHhhhhhHHHH----HHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 66666677777777666555 66655 344443332 2223333443344444444433322221 25777777
Q ss_pred hHHHHHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCc
Q 012629 203 AAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP 282 (459)
Q Consensus 203 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (459)
+.+++..+......+..+|++++.++ ++...+.++..+.+++||+++.+.....+....... .....+.|.++..+.+
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~~~~~-~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~-~~~~~~y~~~~vl~~~ 259 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSVEVTE-QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFAL-MNTFLPYYFTYVLGNE 259 (428)
T ss_pred HHHHHHHHHhhhhhheeeeccccccc-cccccccccchhhhcccchHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHhcCc
Confidence 77777777777776677773222222 222234456677888998888776666655444333 3445555555544443
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHH
Q 012629 283 --HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360 (459)
Q Consensus 283 --~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (459)
.+.......+..+++.++.++++||+|+|+. ...+..+..+......+.... + .+..++...+
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~--~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~i~~~l 324 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV--YIIGLLLAALGFLLLFFLGPG---------S----PWLVLILFIL 324 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee--hhhhHHHHHHHHHHHHHHHhh---------h----HHHHHHHHHH
Confidence 2556667778899999999999999999883 555555555555544444311 0 1467788889
Q ss_pred HHhhhcchhhHHHHHHhccCChhh
Q 012629 361 FEACVGIFWPSIMKMRSQYIPEEA 384 (459)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~p~~~ 384 (459)
.|++.+..+...++..+|..+.++
T Consensus 325 ~gi~~~~~~~~~~a~~ad~id~~e 348 (428)
T PF13347_consen 325 AGIGYGAFFVIPWAMLADVIDYDE 348 (428)
T ss_pred hHhhhcccccccccccccchhhHH
Confidence 999999999999999999988654
No 107
>PTZ00207 hypothetical protein; Provisional
Probab=99.78 E-value=4.6e-17 Score=158.49 Aligned_cols=121 Identities=12% Similarity=0.043 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHHHhhhhc---cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHH
Q 012629 39 KNNYLLVYSLMMAGDWLQ---GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~---~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~ 115 (459)
||..+..........+.. ..+.+.+.+++|+|.++++++.+.+...+ .+.++.|++.||+|||+++.++.+++.++
T Consensus 26 Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG 104 (591)
T PTZ00207 26 RFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLG 104 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 455544444444433222 45556888999999999998887765543 45667899999999999999999999998
Q ss_pred H-HHhhC------CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc--cccccchh
Q 012629 116 C-ITKHS------PQYKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQ 161 (459)
Q Consensus 116 ~-l~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~ 161 (459)
. +++++ ++++.+++.|++.|+|.+...+.... .+.++ ++|+...+
T Consensus 105 ~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~-~i~~~Fp~~RG~a~G 158 (591)
T PTZ00207 105 TLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVV-TVLSVFPSNRGAVVA 158 (591)
T ss_pred HHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhChhhhHHHHH
Confidence 6 55665 68999999999999999988777655 56666 55555444
No 108
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.78 E-value=5.5e-16 Score=148.95 Aligned_cols=345 Identities=12% Similarity=0.074 Sum_probs=203.3
Q ss_pred hhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHH-HH-HHhh-CCchH-HHHHHHHHHHhHhhhhhhhhhhhhh
Q 012629 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-ITKH-SPQYK-ILMIGRILGGIATSLLFSAFESWLV 150 (459)
Q Consensus 75 g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~-~~-l~~~-~~~~~-~l~~~r~l~G~~~~~~~~~~~~~~i 150 (459)
+...++..+...+..|+.|.++|+-|+||.++....+.+. ++ ...+ .++.+ ...+.-++.-++.+.......+ ++
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna-~L 151 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA-YL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence 4666777788888999999999999988777766555544 43 3344 34433 3344444444555555555544 66
Q ss_pred hhccccccch-hh---------------------HHHHHHHHHHHHHHHHHHHhhhhhhhccc------ccCCccccchh
Q 012629 151 AEHNKRGFEQ-QW---------------------LSITFSKAIFLGNGLVAILSGLFGNLLVD------SFSLGPVAPFD 202 (459)
Q Consensus 151 ~~~~~r~~~~-~~---------------------~~~~~~~~~~~g~~~g~~~~~~l~~~l~~------~~~~~w~~~f~ 202 (459)
.|..++.... .. .....+.+...|+ +|.++.-.+.-.+.. ...+.-|..+.
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy-~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGY-IGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHH-HHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 6652111110 00 0112222333333 233222222222111 11234566677
Q ss_pred hHHHHHHHHHHHHHhhccccCC-CCC-chh----hHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCC
Q 012629 203 AAACFLAIGMVIILSSWTENYG-DPS-ESK----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (459)
Q Consensus 203 ~~~~~~~i~~~~~~~~~~~~~~-~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (459)
..++..++..+..++..||.++ ++. +.+ ...++..+..+++.|+|......+..++...+... +......|.+
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~t-i~~~~~i~a~ 309 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNT-IISFAGIYAT 309 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 7777666666666656776654 111 111 22345566777788888888887777777777665 5777888888
Q ss_pred CccCCchh---HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHH--hhhccCCCCCCCCCccccc
Q 012629 277 NDEEIPHG---FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV--TSFLVAPSNVKSGGISFSG 351 (459)
Q Consensus 277 ~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 351 (459)
+.++++.. .......+.+++|+++.+++.||+|.|+.+.+........+......+ ..... +... .
T Consensus 310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~------g~~~---~ 380 (477)
T PF11700_consen 310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFF------GLKS---P 380 (477)
T ss_pred HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhccc------Cccc---H
Confidence 88888763 344555688999999999999999998433344433333222222211 11110 0000 1
Q ss_pred hhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHHH
Q 012629 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLV 425 (459)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 425 (459)
+.+.+..++.|+..|..++..-++.+|..|+++.+.-+|++.+. .++++-+.+.+.++ .....+....++.++
T Consensus 381 ~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg-~~r~g~~~l~~lf~~ 459 (477)
T PF11700_consen 381 WEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG-SQRYGFLFLLVLFLI 459 (477)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHH
Confidence 45667778899999999999999999999999999999998883 45555555555543 234444444455555
Q ss_pred HHHHHhh
Q 012629 426 ASVLQRR 432 (459)
Q Consensus 426 ~~~~~~~ 432 (459)
...+...
T Consensus 460 gl~ll~~ 466 (477)
T PF11700_consen 460 GLILLFF 466 (477)
T ss_pred HHHHHhh
Confidence 5444433
No 109
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.77 E-value=4.5e-22 Score=193.93 Aligned_cols=303 Identities=21% Similarity=0.230 Sum_probs=177.6
Q ss_pred chhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCC---chHHHHHHHHHHHhHhhhhhhhhhhh
Q 012629 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSP---QYKILMIGRILGGIATSLLFSAFESW 148 (459)
Q Consensus 73 ~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~ 148 (459)
+.++..+..++...+++++.|.++||+|||+.+..+.++..++. +.++++ |++.+.++|+++|++.|...+....
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~- 125 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI- 125 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 45677788888888889999999999999999999999999986 668888 9999999999999999999888855
Q ss_pred hhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhccccc-CCccccchhhHHHHHHHHHHHHHhhccccC-
Q 012629 149 LVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-SLGPVAPFDAAACFLAIGMVIILSSWTENY- 223 (459)
Q Consensus 149 ~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~-~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~- 223 (459)
++.|. ++|++..... ... ..+|..++..++....+.. .+.||..+....+..++..+.. ..+||++
T Consensus 126 ~~~E~~~~~~R~~~~~~~----~~~----~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~ 196 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLF----QLF----WALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPR 196 (451)
T ss_pred cccccccccccccccccc----ccc----cccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 89998 4444444422 222 2334444433333322222 3678888888777776554444 3667743
Q ss_pred -----CCCCchhhHHHHH-----------------Hh------hhHHhcchhH----HHHHHHHHHhhhhhhhhhhhhhc
Q 012629 224 -----GDPSESKDLLTQF-----------------RG------AAVAIASDEK----IALLGAIQSLFEGSMYTFVFLWT 271 (459)
Q Consensus 224 -----~~~~~~~~~~~~~-----------------~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 271 (459)
++.+++++..++. ++ .+++++++++ .........+.+...+.....+.
T Consensus 197 wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 276 (451)
T PF00083_consen 197 WLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS 276 (451)
T ss_pred eecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 2222222211110 00 1223444422 22222222222233333344555
Q ss_pred cccCCCccCCchh-HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHH-HhhhccCCCCCCCCCccc
Q 012629 272 PALSPNDEEIPHG-FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI-VTSFLVAPSNVKSGGISF 349 (459)
Q Consensus 272 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 349 (459)
|.+.++ .+.+.. .......+...++.++...+.||+|||+. +..+.....++..... ......+. ...+.
T Consensus 277 ~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~--~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~- 348 (451)
T PF00083_consen 277 PSIFEN-AGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKL--LIIGLLLMAICSLILGIIFFLGVSS----SSWWS- 348 (451)
T ss_pred cccccc-cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc----ccccc-
Confidence 655543 333333 23334446677777888899999999973 4444444444433332 11111000 00011
Q ss_pred cchhHHHHHHHHHhhhcc-hhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 350 SGSLQLLGFCTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
+..+....+....++. ..+..+.+..|.+|++.|+++.++....
T Consensus 349 --~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~ 393 (451)
T PF00083_consen 349 --ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAV 393 (451)
T ss_pred --cccceeeeecccccccccccccccccccccccccccccccccccc
Confidence 1222333333333332 3467778999999999999999887763
No 110
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.77 E-value=7e-16 Score=147.92 Aligned_cols=324 Identities=15% Similarity=0.093 Sum_probs=182.1
Q ss_pred cchhhhh-hhccCCCccchhhHHHHHHHHhhhhhccccchhccc-CcchhhHHHHHHHHHHH-HHhhCC-chHHHHHHHH
Q 012629 57 GPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHSP-QYKILMIGRI 132 (459)
Q Consensus 57 ~p~l~~~-~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~-l~~~~~-~~~~l~~~r~ 132 (459)
..++|.. .+++|+++.+.+.+.........+..+++|+++||+ ||||++.++.++.+++. +++..+ +...+.+...
T Consensus 29 ~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~ 108 (493)
T PRK15462 29 RALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLA 108 (493)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Confidence 3344443 467899999999888887777778888999999999 99999999999988875 444433 2233444444
Q ss_pred HHHhHhhhhhhhhhhhhhhhc-ccc-ccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHH
Q 012629 133 LGGIATSLLFSAFESWLVAEH-NKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (459)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~-~~r-~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i 210 (459)
+.++|.|...+...+ +++|. +++ .++.+ .++..++.++ +|..++|.+.+++.+.. +|+..|.+.++..++
T Consensus 109 li~iG~G~~~~~~~a-lv~elfp~~~~~R~s----gf~i~Y~~~n-lG~~iap~l~g~L~~~~--Gw~~~F~iaaigm~l 180 (493)
T PRK15462 109 IIVCGYGLFKSNVSC-LLGELYEPTDPRRDG----GFSLMYAAGN-VGSIIAPIACGYAQEEY--SWAMGFGLAAVGMIA 180 (493)
T ss_pred HHHHhcccccccHHH-HHHHHCCCCCccccc----eehHHHHHHH-HHHHHHHHHHHHHHhhh--ChHHHHHHHHHHHHH
Confidence 555666666665545 77776 221 12322 2332333333 67777777777776544 566778776544433
Q ss_pred HHHHHHh---hccccC---CCCCchhhHH-----------------H-H-HHhh--------------------h-HHh-
Q 012629 211 GMVIILS---SWTENY---GDPSESKDLL-----------------T-Q-FRGA--------------------A-VAI- 243 (459)
Q Consensus 211 ~~~~~~~---~~~~~~---~~~~~~~~~~-----------------~-~-~~~~--------------------~-~~~- 243 (459)
..+.... ..++.. +++.++++.. . . ..+. . +..
T Consensus 181 ~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (493)
T PRK15462 181 GLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAEN 260 (493)
T ss_pred HHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3333221 122211 1111101100 0 0 0000 0 000
Q ss_pred cchhHHHHHHHHHHhhhhhh---hhhhhhhccccCCC-------ccCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCC-c
Q 012629 244 ASDEKIALLGAIQSLFEGSM---YTFVFLWTPALSPN-------DEEIPHGFIFATFMLASMLGSSLASRLMARSPPR-V 312 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-~ 312 (459)
..+|+-....+...+....+ |....+-+..|.++ +++.++++..+.+.+..++.+++.+++-.|..+| +
T Consensus 261 ~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~ 340 (493)
T PRK15462 261 QKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNR 340 (493)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 01222222222222222111 11111112222222 2234667888888888888888877776666322 1
Q ss_pred --c--hhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhh
Q 012629 313 --E--SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTI 388 (459)
Q Consensus 313 --~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~ 388 (459)
. .-...+..+.+++...+.+...... ++-..+.++++....+.+++.-...|...+.+++..|++.+|..
T Consensus 341 ~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~------~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~ 414 (493)
T PRK15462 341 TVRIWGKFALGLGLMSAGFCILTLSARWSA------MYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVL 414 (493)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHH
Confidence 1 1144566666666555443332211 11113345678888999999999999999999999999999999
Q ss_pred hhhhhh
Q 012629 389 MNFFRI 394 (459)
Q Consensus 389 ~g~~~~ 394 (459)
+|+...
T Consensus 415 mg~w~l 420 (493)
T PRK15462 415 TGIYML 420 (493)
T ss_pred HHHHHH
Confidence 998755
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4.2e-15 Score=138.94 Aligned_cols=307 Identities=17% Similarity=0.176 Sum_probs=195.9
Q ss_pred cchhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhcc----cCcchhh-HHHHHHHHHHH-HHhhCCc------
Q 012629 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRAC-VTYCLTYILSC-ITKHSPQ------ 123 (459)
Q Consensus 57 ~p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~~-~~~~~~~~~~~-l~~~~~~------ 123 (459)
.-++...+ +..|+++..+|.++.+.-+.-++..|+.|.++|| +||||.+ +.+.+..++.. ++-.+++
T Consensus 32 ~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k 111 (467)
T COG2211 32 VLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGK 111 (467)
T ss_pred HHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcc
Confidence 33344444 6789999999999999999999999999999994 7876654 55556666654 4444443
Q ss_pred hHHHHHHHHHHHhHhhhhhhhhhhhhhhh----ccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc-cCCccc
Q 012629 124 YKILMIGRILGGIATSLLFSAFESWLVAE----HNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-FSLGPV 198 (459)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~----~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~-~~~~w~ 198 (459)
....++.-.+.+++......+-.+ +..| +++|.+..++.....+ .|..+...+.+++...+.+. ..++|+
T Consensus 112 ~~ya~vtY~l~~l~YT~vniPy~a-l~~~iT~d~~ER~~l~s~R~~~~~----~g~~l~~~~~~plv~~~g~~~~~~g~~ 186 (467)
T COG2211 112 LIYALVTYMLLGLGYTLVNIPYGA-LGPEITQDPQERASLTSWRMVFAS----LGGLLVAVLFPPLVKLFGGGDKALGYQ 186 (467)
T ss_pred hHHHHHHHHHHHHHHHheeCchhh-cchhhcCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCCCcchhhHH
Confidence 334556677788877776655544 4444 4666666665444333 33334444443444443332 256777
Q ss_pred cchhhHHHHHHHHHHHHHhhccccCCCCCchhh-HHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCC
Q 012629 199 APFDAAACFLAIGMVIILSSWTENYGDPSESKD-LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (459)
Q Consensus 199 ~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (459)
..-.+.+++..+..++.++..+|+..+.++.++ ..++.++....+++||++........+.... +.........|.+.
T Consensus 187 ~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~-~~i~~s~~~yy~~y 265 (467)
T COG2211 187 GTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIA-FNIRGSIMVYYVTY 265 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHhhhhheeEEE
Confidence 777777777777777777667765543322221 3334455566788898888877755444444 33345566666666
Q ss_pred ccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhH
Q 012629 278 DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (459)
Q Consensus 278 ~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (459)
..+.+. .........+.+++.++..++.+|+|+|+ ....+..+..+......+.... + .+..
T Consensus 266 ~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~--~~~~~~~~~~i~~~~~~f~~~~---------~----~~l~ 330 (467)
T COG2211 266 VLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK--LFLIGLLLLAVGYLLLYFTPAG---------S----VVLI 330 (467)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH--HHHHHHHHHHHHHHHHHhhcCc---------c----hHHH
Confidence 555544 34455555667777899999999999887 3555555444444444433311 0 1355
Q ss_pred HHHHHHHHhhhcchhhHHHHHHhccCChhh
Q 012629 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (459)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~ 384 (459)
++..++.+++.+..++..++.++|..+-++
T Consensus 331 ~~~~~i~~~g~~~~~~l~wam~~d~vDyge 360 (467)
T COG2211 331 VVALIIAGVGTGIANPLPWAMVADTVDYGE 360 (467)
T ss_pred HHHHHHHHHHhhccccccHHHhcchhhHHH
Confidence 666788899999999999999999987554
No 112
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.5e-16 Score=135.16 Aligned_cols=360 Identities=14% Similarity=0.130 Sum_probs=195.6
Q ss_pred HHHHHHHHhhhhc--cch--hhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcc-cCcchhhHHHHHHHHHH-H-
Q 012629 44 LVYSLMMAGDWLQ--GPY--VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILS-C- 116 (459)
Q Consensus 44 ~~~~~~~~~~~~~--~p~--l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~-~- 116 (459)
...++.-++..+. .|- -.+...|.+++.++...+++.......+...++|++.|| +|.|..-++-+....++ .
T Consensus 47 v~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~Gqli 126 (459)
T KOG4686|consen 47 VFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLI 126 (459)
T ss_pred HHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHH
Confidence 3334444444443 443 223346777888888888888888777888899999996 68776555554444444 2
Q ss_pred --HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhccc
Q 012629 117 --ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (459)
Q Consensus 117 --l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~ 191 (459)
..+..+.+|++..+|++.|+|.-..-...+. +..-+ ++-+...+.+.+..- +|+.+-..+.|.+......
T Consensus 127 Fa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~-yav~wFKGKELn~vfGlqlSvAR----~GstvNf~lm~~ly~~~~~ 201 (459)
T KOG4686|consen 127 FAAGGISHAFWTMLAGRFLFGIGGESLAVAQNK-YAVYWFKGKELNFVFGLQLSVAR----LGSTVNFLLMPFLYDTMGR 201 (459)
T ss_pred HHhchHHHHHHHHHhhheeeccCchhhhhhhcc-eeEEEecCccccchhhHHHHHHH----hhceeeeeecHHHHHHHHH
Confidence 2256889999999999999986665444444 54444 333444443333222 2222222222222221111
Q ss_pred ccC------CccccchhhH-HHHHHHHHHHHHhhccccCCCCCchhhHHHHHH------hhhHHhc-chhHHHHHHHHHH
Q 012629 192 SFS------LGPVAPFDAA-ACFLAIGMVIILSSWTENYGDPSESKDLLTQFR------GAAVAIA-SDEKIALLGAIQS 257 (459)
Q Consensus 192 ~~~------~~w~~~f~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~ 257 (459)
..+ .|-...+-.. ....+++.. .. .+.+++ +++..++-. +...+.. -.|++|.+.....
T Consensus 202 ~~~~~ghT~LG~~l~~~~~tc~~slical-~l-g~~D~r-----Aerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv 274 (459)
T KOG4686|consen 202 MFPGVGHTLLGLWLCFEVKTCKQSLICAL-SL-GLSDDR-----AERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICV 274 (459)
T ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHH-Hh-hhhhhH-----HHHHHhhhcCcccCCcccccccccCccHHHHHHHHH
Confidence 110 0000011100 000111111 00 111110 111110000 0001111 1367888877777
Q ss_pred hhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 012629 258 LFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTS 334 (459)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~ 334 (459)
+.....+.+ ....|.++++.+|.++ +.+.+..-..+.+.+++.|.++||+|++.. .+..+.......-..+.+ .
T Consensus 275 ~yyva~fPF-i~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~-wv~~a~~~tl~~H~~l~F-t 351 (459)
T KOG4686|consen 275 LYYVAWFPF-ITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW-WVASACILTLLGHSGLFF-T 351 (459)
T ss_pred HHHHHHHHH-hhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh-hHHHHHHHHHHHhhhHHh-h
Confidence 777776664 6678889999999876 445555555567778899999999998752 111121222222222221 1
Q ss_pred hccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhhh------HHHHHhhhccC
Q 012629 335 FLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN------IFVCVVLYNVD 408 (459)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~------~~~~~~l~~~~ 408 (459)
.. ....++++.|....+.....+..++..+|+++.|+++|..+...| +++.+.+.+.+
T Consensus 352 ~l----------------sPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~ 415 (459)
T KOG4686|consen 352 FL----------------SPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGD 415 (459)
T ss_pred hc----------------cHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCC
Confidence 11 236788899999988888899999999999999999988776432 34555555554
Q ss_pred cc--hhHHHHHHHHHHHHHHHHHHhhhh
Q 012629 409 AF--PITVMFGMCSIFLLVASVLQRRLM 434 (459)
Q Consensus 409 ~~--~~~~~~~~~~~~~~~~~~~~~~~~ 434 (459)
+. .....+..+....+......+...
T Consensus 416 g~y~~le~ffl~~~~~aL~svgil~~~N 443 (459)
T KOG4686|consen 416 GSYDNLEAFFLIIGLMALTSVGILFYLN 443 (459)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhee
Confidence 42 234444555444444444444333
No 113
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=3.7e-15 Score=135.63 Aligned_cols=337 Identities=17% Similarity=0.205 Sum_probs=197.0
Q ss_pred cchhhHHHHHHHHHHHHhhhhc----cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHH
Q 012629 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (459)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~ 110 (459)
.-+.||.+++++.+..++++++ +|.-....+.|| +....-|+..+....+...+.++-|+.||+|-|...+++..
T Consensus 39 Vy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 39 VYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred cchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 3455888899989999988887 555444456677 54445566666667777888888999999999999999999
Q ss_pred HHHHHHHH---hhCC----chH--HHHHHHHHHHhHhhhhhhhhhhhhhhhc----cccccchhhHHHHHHHHHHHHHHH
Q 012629 111 TYILSCIT---KHSP----QYK--ILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGL 177 (459)
Q Consensus 111 ~~~~~~l~---~~~~----~~~--~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~ 177 (459)
+.+++... +..+ .++ ....+..+.+.+.-...... + -+++. ++|... ......++.+
T Consensus 118 ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lP-s-kiA~~WF~~~qra~A--------~~~~v~~n~L 187 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLP-S-KIAAVWFPPDQRAIA--------TVLGVMGNPL 187 (480)
T ss_pred HHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccc-c-HHHHhhCCcchhhhh--------hhHHHhcchH
Confidence 99997533 2222 333 44566666666555544432 2 23332 223322 2223334444
Q ss_pred HHHHhhhhhhhccccc----CCcccc--chhhHHHHHHHHHHHHHhhccccCCCCCchhhHHH---HHHhhhHHhcchhH
Q 012629 178 VAILSGLFGNLLVDSF----SLGPVA--PFDAAACFLAIGMVIILSSWTENYGDPSESKDLLT---QFRGAAVAIASDEK 248 (459)
Q Consensus 178 g~~~~~~l~~~l~~~~----~~~w~~--~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 248 (459)
|..++.++...+.++. +..|.. .|+....+..+.+.+..+..++.++.++......+ ...+..+..+++++
T Consensus 188 Gvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~ 267 (480)
T KOG2563|consen 188 GVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQ 267 (480)
T ss_pred HHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCcc
Confidence 4444444444444332 233332 34444444444443333333333332322222222 24567778899999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhccccCCCccC-CchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHH
Q 012629 249 IALLGAIQSLFEGSMYTFVFLWTPALSPNDEE-IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL 327 (459)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~ 327 (459)
+..+.+++.+..+.++...+...+...-.+++ ...|.......+++++++.+.|.+.||.+.-+. ...+......+..
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~-~~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKL-TTLVLYLFALVGT 346 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH-HHHHHHHHHHHHH
Confidence 99998888887777766433333233333332 355888888889999999999999999854442 2222222222221
Q ss_pred HHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 328 LLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
..+...... ..+ .+.+.....++|++.....|+..-+..|..-+..-++..|+.++
T Consensus 347 ~~l~~~t~~-------~~~----~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~ 402 (480)
T KOG2563|consen 347 LMLLTCTLF-------LGD----SVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNL 402 (480)
T ss_pred HHHHHhhcc-------CCc----eEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEe
Confidence 111111111 011 13445556677777777889888888888655555666666555
No 114
>PRK11462 putative transporter; Provisional
Probab=99.68 E-value=8.3e-14 Score=135.23 Aligned_cols=292 Identities=15% Similarity=0.151 Sum_probs=157.4
Q ss_pred hhccCCCccchhhHHHHHHHHhhhhhccccchhcc----cCcchhhH-HHHHHHHHHH-HHhhCCc------hHHHHHHH
Q 012629 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRACV-TYCLTYILSC-ITKHSPQ------YKILMIGR 131 (459)
Q Consensus 64 ~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr----~Grr~~~~-~~~~~~~~~~-l~~~~~~------~~~l~~~r 131 (459)
.+..|+++..+|.++.+.-+.-.+..|+.|.++|| +||||..+ ++.+..+++. ++-..++ ...+.+.-
T Consensus 37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~ 116 (460)
T PRK11462 37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITY 116 (460)
T ss_pred HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 36789999999999999999999999999999995 79876655 4556666665 3332332 22345555
Q ss_pred HHHHhHhhhhhhhhhhhhhhhc----cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc-cccCCccccchhhHHH
Q 012629 132 ILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV-DSFSLGPVAPFDAAAC 206 (459)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~-~~~~~~w~~~f~~~~~ 206 (459)
++..++.........+ +..|. ++|.+..++.. .+..+|..+++.+..++....- +....+|+....+.++
T Consensus 117 ~~~~~~~t~~~ipy~a-l~~~lt~d~~eRt~l~s~r~----~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 117 TLLTLLYTVVNIPYCA-LGGVITNDPTQRISLQSWRF----VLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHHHHHHHHhccHHH-HHHHhcCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 5666666666655544 55554 55555444322 2333344444444333222211 1111345554555555
Q ss_pred HHHHHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhh--hhhhhhhccccCCCccCCch-
Q 012629 207 FLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM--YTFVFLWTPALSPNDEEIPH- 283 (459)
Q Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~- 283 (459)
+..++....+...+|..++++++. +.++..+..++||.++.+.....+..... ......|...|. .+.+.
T Consensus 192 i~~i~~~i~~~~~kE~~~~~~~~~----~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~---~g~~~~ 264 (460)
T PRK11462 192 VAFMMLAFCFFTTKERVEAPPTTT----SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI---LGTPEV 264 (460)
T ss_pred HHHHHHHHHHhcceeccCCCccCC----CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh---cCChHH
Confidence 555554444434455432222111 13445566778877765543332222221 111223333333 22222
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHH
Q 012629 284 -GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (459)
Q Consensus 284 -~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (459)
+.......+..+++.++++++.||+++|+. .........+......+.... + .+...+..++.+
T Consensus 265 ~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~--~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~~l~g 329 (460)
T PRK11462 265 FVAFLTTYCVGNLIGSALAKPLTDWKCKVTI--FWWTNALLAVISLAMFFVPMQ---------A----SITMFVFIFVIG 329 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHH--HHHHHHHHHHHHHHHHHhchh---------H----HHHHHHHHHHHH
Confidence 345566677888899999999999987762 222222222222222111111 0 012334445566
Q ss_pred hhhcchhhHHHHHHhccCCh
Q 012629 363 ACVGIFWPSIMKMRSQYIPE 382 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~ 382 (459)
++.+...+..+++..|..+.
T Consensus 330 ~~~~~~~~l~~~m~ad~~d~ 349 (460)
T PRK11462 330 VLHQLVTPIQWVMMSDTVDY 349 (460)
T ss_pred HHHHHHHHHHHHHHHHhHhh
Confidence 66666667777888887663
No 115
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.66 E-value=1.8e-14 Score=132.10 Aligned_cols=235 Identities=12% Similarity=0.059 Sum_probs=144.9
Q ss_pred hCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhccccc---
Q 012629 120 HSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF--- 193 (459)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~--- 193 (459)
...+|+.++++-++.|.|.+...+..++ ++++. +++.++.+..+.. +++|..++|.+++.+....
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~-~v~~~~~~~~~~~~l~~~~~~--------~~~G~~~gP~i~~~~i~~~~~~ 76 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANP-YVSILGPIETAASRLALTQAF--------NKLGTTVAPLFGGSLILSGAGD 76 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHH-HHHHHCCcchHHHHHHHHHHH--------hhhHHHHHHHHHHHHHhcCCcc
Confidence 4578999999999999999999999988 87766 3444555544443 3355555555555544211
Q ss_pred -----------CCccccchhhHHHHHHHHH-HHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhh
Q 012629 194 -----------SLGPVAPFDAAACFLAIGM-VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEG 261 (459)
Q Consensus 194 -----------~~~w~~~f~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (459)
.++|+.+|++.+.+..+.. ++.....||.+++++++....+ ....+..+++|..+...+..++..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~f~yvg 154 (310)
T TIGR01272 77 LSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGD--TTQKTSAFQFTHLVLGALGIFVYVG 154 (310)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccccccccc--ccchhhHHhhHHHHHHHHHHHHHHH
Confidence 1468888886555544333 3333345554332222111111 0112235666777665555555444
Q ss_pred hhhhhhhhhccccCCCc--cCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhc
Q 012629 262 SMYTFVFLWTPALSPND--EEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFL 336 (459)
Q Consensus 262 ~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 336 (459)
.... ...|.+.|+.+. ++.+. +...+.+..+.++++++.+++.||+++|+ .+.....+..+...+.. ....
T Consensus 155 ~e~~-~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~--~l~~~~~l~~~~~~l~~-~~~~ 230 (310)
T TIGR01272 155 AEVS-AGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR--YLAFNAFLAVLLSIGAA-LTHG 230 (310)
T ss_pred HHHH-HHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHH-HcCC
Confidence 5444 588899998643 45543 56777888899999999999999999877 24343333333322211 1111
Q ss_pred cCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh
Q 012629 337 VAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (459)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~ 384 (459)
........+.+++.+..+|...+...+..|++.
T Consensus 231 ---------------~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~ 263 (310)
T TIGR01272 231 ---------------YVAMWFVLALGLFNSIMFPTIFSLALNALGRHT 263 (310)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 123446667889999999999999999888753
No 116
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.64 E-value=1.5e-13 Score=124.63 Aligned_cols=302 Identities=12% Similarity=0.108 Sum_probs=184.0
Q ss_pred hhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHH-HH-HHhhCCc--hH-HHHHHHHHHHhHhhhhhhhhhhh
Q 012629 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-ITKHSPQ--YK-ILMIGRILGGIATSLLFSAFESW 148 (459)
Q Consensus 74 ~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~-~~-l~~~~~~--~~-~l~~~r~l~G~~~~~~~~~~~~~ 148 (459)
.|...++..+...+.+|+.|.++|+.|+||..........+ +. ...++++ ++ ..++.-.+..++.........+
T Consensus 60 ~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds- 138 (438)
T COG2270 60 WGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS- 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh-
Confidence 34556666666778889999999999988777666665554 43 4455444 44 4455666777777777666656
Q ss_pred hhhhccccccchhhHHHHHHHHHHHHHHHHH------HHhhhhhhhc------ccccCCccccchhhHHHHHHHHHHHHH
Q 012629 149 LVAEHNKRGFEQQWLSITFSKAIFLGNGLVA------ILSGLFGNLL------VDSFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 149 ~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~------~~~~~l~~~l------~~~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
++.+..++......-+..+..+.. |+.+-. .+++.-.+.. .+..+..-|..+.+.++..++..+..+
T Consensus 139 ~L~~~~~k~~~~riS~lg~~~gyl-gs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 139 MLPRLTTKDNMGRISGLGWALGYL-GSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred HhhhhcCccccCcccccccccccc-cchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 666553332222111111221111 111111 1111000000 011223345556666665555444444
Q ss_pred hhccccCCCC-Cc---hhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCchh---HHHHH
Q 012629 217 SSWTENYGDP-SE---SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIFAT 289 (459)
Q Consensus 217 ~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 289 (459)
...|+.++.. .. -.+..++..++.+++++++......+..++..-+... +..+...|....+|++.. .....
T Consensus 218 ~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~t-il~~~~~fg~~~~gls~~~lll~g~~ 296 (438)
T COG2270 218 LNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNT-ILAMGGVFGAADLGLSSTELLLIGIA 296 (438)
T ss_pred hcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCccHHHHHHHHHH
Confidence 4444433211 11 1123455666778888888877777777777777665 566777788877888763 44455
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchh
Q 012629 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (459)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (459)
..+..++++++.|++.||+|.|+ ++..+..+..+..+...+.... .-..+...+.|...|..+
T Consensus 297 ~~vvA~lg~ii~g~Ld~rfg~k~--vl~~~lvi~~~~~~~~~~~~~~---------------~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 297 LSVVAALGAIIAGFLDERFGSKP--VLMIGLVILSIAALYLIFLEGE---------------LDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhCCce--eehHHHHHHHHHHHHHHHcccc---------------HHHHHHHHHHHHhcchHH
Confidence 56789999999999999999987 3555555444444433332222 244556688899999999
Q ss_pred hHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 370 PSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
...-++..+.+|+++-++.+|++++.
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyalt 385 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALT 385 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhh
Confidence 99999999999999999999999883
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.63 E-value=1.4e-13 Score=127.71 Aligned_cols=330 Identities=18% Similarity=0.195 Sum_probs=199.9
Q ss_pred hhhhccchhhhhhhccC----CCccchhhHHHHHHHHhhhhhccccchhccc-CcchhhHHHHHHHHHHH-HHhhC--Cc
Q 012629 52 GDWLQGPYVYYLYSTYG----FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHS--PQ 123 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~----~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~-l~~~~--~~ 123 (459)
..++..++..+++.+++ +++++...+++.......+...++|+++||+ |+|+++..+.++..+|- +.+.. .+
T Consensus 37 yYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~ 116 (498)
T COG3104 37 YYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSG 116 (498)
T ss_pred hhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccc
Confidence 34555777767776666 8888887777777766777777899999995 99999999999999985 55655 46
Q ss_pred hHHHHHHHHHHHhHhhhhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccch
Q 012629 124 YKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 201 (459)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f 201 (459)
...++++-.+.++|.|..-+...+ ++.|. +++.++.+-... +.. +..+|..++|++.+++.+..+| ...|
T Consensus 117 ~~gl~i~L~~I~iG~Gl~K~NiS~-llg~ly~~~DprrD~gFt~-fY~----~iNiGsl~~p~i~~~~~~~~g~--~~gF 188 (498)
T COG3104 117 PGGLYIGLALIIVGTGLFKPNISS-LLGELYPKDDPRRDGGFTL-FYM----GINIGSLIAPIITGLLAINYGW--HVGF 188 (498)
T ss_pred ccHHHHHHHHHHhccccccccHHH-HHHHhcCCCCcccCCCccE-EEE----EeehHHHHHHHHHHHHHHhhCH--HHHH
Confidence 888999999999999999998866 87776 222223332222 222 3446667777777777665554 5667
Q ss_pred hhHHHHHHHHHHHHHhhc---cccCCCCCc---hhhHHH------------HH------Hhh------------------
Q 012629 202 DAAACFLAIGMVIILSSW---TENYGDPSE---SKDLLT------------QF------RGA------------------ 239 (459)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~---~~~~~~~~~---~~~~~~------------~~------~~~------------------ 239 (459)
...++-..+.++..+..- .....+++. +.+... .. .+.
T Consensus 189 ~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~ 268 (498)
T COG3104 189 GLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFA 268 (498)
T ss_pred HHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666666555444211 111111110 000000 00 000
Q ss_pred --h--HHhcchhHHHHHHHHHHhhhhhhhhh-------hhhhccccCCCc---cCCchhHHHHHHHHHHHHHHHHHHHHh
Q 012629 240 --A--VAIASDEKIALLGAIQSLFEGSMYTF-------VFLWTPALSPND---EEIPHGFIFATFMLASMLGSSLASRLM 305 (459)
Q Consensus 240 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~ 305 (459)
. ++...+|+-....+..++....++.. ++.+.....+.+ ++.++++..+.+.+.-++..++..++.
T Consensus 269 ~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~ 348 (498)
T COG3104 269 EAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALW 348 (498)
T ss_pred HHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHH
Confidence 0 00002222222222222222222221 122222222222 334668888889988888888888888
Q ss_pred hcCCCCc---c--hhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccC
Q 012629 306 ARSPPRV---E--SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYI 380 (459)
Q Consensus 306 dr~g~~~---~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 380 (459)
.|.++++ . .-..++..+++...++......... .+....+.++.+..+++.+++.-...|...+++....
T Consensus 349 ~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~-----~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~la 423 (498)
T COG3104 349 TKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG-----GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLA 423 (498)
T ss_pred hHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhC
Confidence 8854441 1 1234455555555555444422211 1122334568888999999999999999999999999
Q ss_pred Chhhhhhhhhhhhh
Q 012629 381 PEEARSTIMNFFRI 394 (459)
Q Consensus 381 p~~~r~~~~g~~~~ 394 (459)
|+...+..++..-.
T Consensus 424 P~~~~s~~ma~wfL 437 (498)
T COG3104 424 PPALKSFIMAMWFL 437 (498)
T ss_pred hHHHHHHHHHHHHH
Confidence 99999988877655
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.53 E-value=3.8e-11 Score=109.52 Aligned_cols=349 Identities=15% Similarity=0.132 Sum_probs=200.1
Q ss_pred hhhccCCCccchhhHHHHHHHHhhhhhccccchhcccC-----cchhhHHHHH-HHHHHH-HH-----hhCC-------c
Q 012629 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCL-TYILSC-IT-----KHSP-------Q 123 (459)
Q Consensus 63 ~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~~~~~~~-~~~~~~-l~-----~~~~-------~ 123 (459)
+..|++++....+.+....+. -....+.+|+.+|+.+ ||..+++... +...+. +. -++. +
T Consensus 6 MIvEL~vpA~lv~~lval~~~-~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYL-VAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHH-HHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 447899998888888888877 4456788999999999 8877766533 333322 21 1233 2
Q ss_pred hH----HHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCC-ccc
Q 012629 124 YK----ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL-GPV 198 (459)
Q Consensus 124 ~~----~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~-~w~ 198 (459)
.+ ...+.-.+.|+|.+...++..+ +++|..++.++.+.....+. ... +|.+++..+.+.+.+.++- +-.
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lA-Ll~D~~~e~~R~~~v~ivw~-Mli----~G~iv~ai~~g~lL~~~s~~rL~ 158 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLA-LLADLAPEERRPRVVAIVWV-MLI----VGIIVSAIVFGRLLDPFSPERLI 158 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHH-HHHhcCCHhhhhhhHHHHHH-HHH----HHHHHHHHHHHHHccccCHHHHH
Confidence 22 2345566788888888777756 78877333344443333333 233 3344444555544432221 111
Q ss_pred cchhhHHHHHH-HHHHHHHhhccccCCCCCchhhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCC
Q 012629 199 APFDAAACFLA-IGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (459)
Q Consensus 199 ~~f~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (459)
..+...+.+.. +..+..+...|+++++.++.+++.....+.++++.++|+........++....++. -...+-.|-.+
T Consensus 159 ~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~-QD~iLEPygg~ 237 (403)
T PF03209_consen 159 QVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFM-QDVILEPYGGE 237 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHh-hHHHcCCchhH
Confidence 11222222222 22222221112211111112222334455666777777766665555554444443 24455667778
Q ss_pred ccCCchh---HHHHHHHHHHHHHHHHHHHHhhc-CCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchh
Q 012629 278 DEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (459)
Q Consensus 278 ~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (459)
.++++.+ .+......+.+++-...+++..| .++++ ....+......++..........+ .+.
T Consensus 238 Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~--~a~~G~~~~~~~f~lii~a~~~~~------------~~~ 303 (403)
T PF03209_consen 238 VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKR--TAALGCLLGALAFALIILAGPLGS------------PWL 303 (403)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH--HHHHHHHHHHHHHHHHHHHHhccc------------chH
Confidence 8888764 44556667788888888888874 44443 344555555555544444333311 247
Q ss_pred HHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhc--------cCcchhHHHHHHH
Q 012629 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYN--------VDAFPITVMFGMC 419 (459)
Q Consensus 354 ~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~--------~~~~~~~~~~~~~ 419 (459)
+....+++|++.|.......+.+.|..+++..|..+|..... .+.+.|+.+.| .....|..+|..=
T Consensus 304 ~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lE 383 (403)
T PF03209_consen 304 FRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALE 383 (403)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHH
Confidence 788999999999999988999999999999888887766552 33445544422 1233566667666
Q ss_pred HHHHHHHHHHHhhh
Q 012629 420 SIFLLVASVLQRRL 433 (459)
Q Consensus 420 ~~~~~~~~~~~~~~ 433 (459)
++..+++.++..+.
T Consensus 384 a~ll~~a~~ll~~l 397 (403)
T PF03209_consen 384 AVLLLAALVLLGRL 397 (403)
T ss_pred HHHHHHHHHHHHHh
Confidence 66666666555444
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.51 E-value=5.4e-12 Score=118.57 Aligned_cols=184 Identities=19% Similarity=0.139 Sum_probs=118.5
Q ss_pred hhhHHHHHHHHHHHHhhhhc----cchhhhhhhc--cCCCccchhhHHHHHHHHhhhhhccccchhcccCc-chhhHHHH
Q 012629 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYST--YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVTYC 109 (459)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~p~l~~~~~~--~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Gr-r~~~~~~~ 109 (459)
+.+|+.+.++.+..+-..++ .|-.+...++ .+.+.+..|++.++..++..+.++..|+...|.+. |+.++.+.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 34455555554444433333 4444444444 67778888999999888888999999999999996 77888888
Q ss_pred HHHHHHHH---H-hh-CC-chHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHH
Q 012629 110 LTYILSCI---T-KH-SP-QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAI 180 (459)
Q Consensus 110 ~~~~~~~l---~-~~-~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~ 180 (459)
++..++.+ + .. .+ .-+.++++|++.|+|.+..... .+ |+++. ++|.+..+ ..+.+..+|..+|+.
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~l-R~-Y~a~~s~~~dR~rA~a----~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVL-RA-YIADASTVEDRPRAFA----ATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHH-HH-HHHhccCccchHHHHH----HhhhHHHHHHHHhHH
Confidence 88888742 2 23 33 4678899999999998887544 35 87775 55555555 334455566666666
Q ss_pred HhhhhhhhcccccCC----c---cccchhhHHHHHHHHHHHHHhhccccCCCC
Q 012629 181 LSGLFGNLLVDSFSL----G---PVAPFDAAACFLAIGMVIILSSWTENYGDP 226 (459)
Q Consensus 181 ~~~~l~~~l~~~~~~----~---w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~ 226 (459)
+++.+++...+-..+ . +..+-++.+++.++..++.....+|.+.+.
T Consensus 184 ~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 184 IQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred HHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 666666654321111 1 123446666666666666666677755433
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.46 E-value=2.2e-12 Score=123.96 Aligned_cols=165 Identities=13% Similarity=0.134 Sum_probs=112.1
Q ss_pred chhhhhhhccCCCc--------cchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhC-C---ch
Q 012629 58 PYVYYLYSTYGFGK--------GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-P---QY 124 (459)
Q Consensus 58 p~l~~~~~~~~~s~--------~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~-~---~~ 124 (459)
.+.+...++.|.++ ++.+...+...+...++.++.|+++||+|||+++..+.++.+++. +.... + ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 44444555666543 455777777777677777889999999999999999999888864 44442 2 24
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC----Cccccc
Q 012629 125 KILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS----LGPVAP 200 (459)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~----~~w~~~ 200 (459)
+.+++.+++.|++.+...+.... ++.|..+++.+.. .++........+|..++|.+++.+.++.+ ++|+..
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~-~i~~~~p~~~~g~----~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~ 383 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSV-FVEKEVPVHIRAS----AQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTM 383 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHH----HHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHH
Confidence 56778899999999888777655 7777633333332 22222223345666777777777766544 678888
Q ss_pred hhhHHHHHHHHHHHHHhhccccCCCCC
Q 012629 201 FDAAACFLAIGMVIILSSWTENYGDPS 227 (459)
Q Consensus 201 f~~~~~~~~i~~~~~~~~~~~~~~~~~ 227 (459)
|...+++.++..++..+.++|+++..+
T Consensus 384 f~~~~~~~~i~~~l~~~~~~~~~~~~~ 410 (418)
T TIGR00889 384 WLFFAGYIAILAVLFMIFFKYSHNAIK 410 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 888888877777777777777655433
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.38 E-value=3.4e-10 Score=108.03 Aligned_cols=279 Identities=17% Similarity=0.140 Sum_probs=165.5
Q ss_pred HHhhhhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhHh--hhhhhhhhhhhhhhc---cccc
Q 012629 83 GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIAT--SLLFSAFESWLVAEH---NKRG 157 (459)
Q Consensus 83 ~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~--~~~~~~~~~~~i~~~---~~r~ 157 (459)
+...+.++..|.++||+|||..+........+...+.....+|.++ +.|+.. +.......+ +++|. ++|.
T Consensus 73 ~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~----~~~l~g~~~~~~s~~~a-~vadis~~~~R~ 147 (463)
T KOG2816|consen 73 LLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL----LLGLSGGFSAIFSVGFA-YVADISSEEERS 147 (463)
T ss_pred HHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh----hcccccchhhhhhhhhh-heeeccchhHHH
Confidence 4566778899999999999999999998888875443333344443 444422 223333334 67776 3343
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCCCCch--------
Q 012629 158 FEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES-------- 229 (459)
Q Consensus 158 ~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------- 229 (459)
...+..... ...+..++|.+++.+.+.. +.-.+|.+..+..++........+||+..++++.
T Consensus 148 ~~~gll~~~--------~~~~~~~~p~~~~~~~~~~--~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~ 217 (463)
T KOG2816|consen 148 SSIGLLSGT--------FGAGLVIGPALGGYLVKFL--GIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELT 217 (463)
T ss_pred HHHHHHHHH--------HHHHHhHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccC
Confidence 433322222 3345555566666655443 3457788888888888888887888865544433
Q ss_pred --hhHHHHHHhh---hHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHH
Q 012629 230 --KDLLTQFRGA---AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLA 301 (459)
Q Consensus 230 --~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 301 (459)
+.......+. ......+|..+.++....+..........-..+.|.+..++++. +...+..+....++..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~ 297 (463)
T KOG2816|consen 218 PGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLL 297 (463)
T ss_pred CCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 11222344444444444444333322112134677777888866 455566666666676555
Q ss_pred H-HHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccC
Q 012629 302 S-RLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYI 380 (459)
Q Consensus 302 g-~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 380 (459)
. .+...++.|+ ....+...-........+.... +................|...+..+...
T Consensus 298 ~~~l~~~l~~~~--~i~lGl~~~~~~~~~~af~~~~----------------w~~~~~~v~~~~~~~~~pa~~s~~s~~v 359 (463)
T KOG2816|consen 298 LPLLSSILGEKR--LISLGLLSEFLQLLLFAFATET----------------WMMFAAGVVVALAGIVFPAIRAFASILV 359 (463)
T ss_pred HHHHHHHHhhhh--HhhHHHHHHHHHHHHHHHhccc----------------hhhhHHHHHHHhhcchhHHHHhHHHhhc
Confidence 5 7777777776 3445555444444444444333 3334445555566678899999999999
Q ss_pred Chhhhhhhhhhhhh
Q 012629 381 PEEARSTIMNFFRI 394 (459)
Q Consensus 381 p~~~r~~~~g~~~~ 394 (459)
+++++|+++++.+.
T Consensus 360 ~~~e~g~v~~~is~ 373 (463)
T KOG2816|consen 360 SPEEQGKVFGIISG 373 (463)
T ss_pred ccccccchhhHHHH
Confidence 99999999987776
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.34 E-value=9.4e-10 Score=105.65 Aligned_cols=363 Identities=16% Similarity=0.102 Sum_probs=180.7
Q ss_pred chhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccC-----cchhhHHHHHHHHHHH-HHhh----CCchHHH
Q 012629 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTYILSC-ITKH----SPQYKIL 127 (459)
Q Consensus 58 p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G-----rr~~~~~~~~~~~~~~-l~~~----~~~~~~l 127 (459)
+..|.+.+++|+++++.....+...+ --...|+.|.++|.+. ||+-++++.++..++. ..+. ..+....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 34456778999999999877666554 3355678999999763 4455566666554443 2233 2356666
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhcccc-ccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHH
Q 012629 128 MIGRILGGIATSLLFSAFESWLVAEHNKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (459)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~~~~~r-~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~ 206 (459)
.+.-++..+|.+.....+.+ ++.|..+| ....+..++..... ..+|.+++..+++.+.+.. +++..|.+.+.
T Consensus 90 ~~~l~la~~g~a~~DV~aDa-~vvE~~~~~p~~~g~lqS~~~~~----~~~G~lv~~~l~G~l~~~~--~~~~~f~i~~~ 162 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADA-LVVELARREPESRGDLQSFVWGV----RSVGSLVGSLLSGPLLDSF--GPQGVFLISAA 162 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhH-HHHHHhhcCCchhHHHHHHHHHH----HHHHHHHHHHhhhhhhhcC--CCeEEehHHHH
Confidence 77778888999999888877 77777222 12123333323323 3345555556666666544 44566877776
Q ss_pred HHHHHHHHHHhhccccCCCCCch---------hhH---HHHHHhhhHHhcchhHHHHHHH-HHHhhhhhhhhh-h-hhhc
Q 012629 207 FLAIGMVIILSSWTENYGDPSES---------KDL---LTQFRGAAVAIASDEKIALLGA-IQSLFEGSMYTF-V-FLWT 271 (459)
Q Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~ 271 (459)
+..+..+......+|.+.+++++ +.. .++.....++.++++..+...+ ..++........ . ..|.
T Consensus 163 ~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~ 242 (433)
T PF03092_consen 163 LPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYF 242 (433)
T ss_pred HHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEE
Confidence 66666555544444421111100 000 1222334445566666665544 222222111110 0 1111
Q ss_pred cccCCCccCCchh---HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcc
Q 012629 272 PALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (459)
Q Consensus 272 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (459)
......+.|.+.. ....+..++.+++..+..+...+..-|+ ++.....+..+..+.-.......+. .-..+
T Consensus 243 ~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~--~~~~t~~~~~~~~l~~~~lv~~~n~----~~Gi~ 316 (433)
T PF03092_consen 243 QTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRR--IFVVTTLVSVLASLFDLLLVTRWNL----DLGIP 316 (433)
T ss_pred EeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH--HHHHHHHHHHHHhcccEEEEEEEee----eeCcC
Confidence 1111113335553 3334444556666666655555554443 2222222222111111111000000 00011
Q ss_pred ccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhhhH------HHHHhhh------ccCcchhHHHH
Q 012629 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNI------FVCVVLY------NVDAFPITVMF 416 (459)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~------~~~~~l~------~~~~~~~~~~~ 416 (459)
.. +..+.--.+..+...+.+-....+++|..|+...|+.+++.....|. .++..+. +.+-.+.....
T Consensus 317 d~-~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~li 395 (433)
T PF03092_consen 317 DQ-WFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLI 395 (433)
T ss_pred Ce-EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHH
Confidence 11 12233345555566666667788899999999999988766553222 2222221 11122455566
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 012629 417 GMCSIFLLVASVLQRRLMV 435 (459)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~ 435 (459)
.++.+..++...+...+++
T Consensus 396 li~~~~~ll~l~ll~lLp~ 414 (433)
T PF03092_consen 396 LICSVIQLLPLPLLFLLPP 414 (433)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 6665555444444444444
No 123
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.28 E-value=5.4e-11 Score=114.85 Aligned_cols=149 Identities=12% Similarity=0.051 Sum_probs=104.4
Q ss_pred hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhh
Q 012629 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFS 143 (459)
Q Consensus 65 ~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (459)
++.+.+..+.|.+.+...+...++.+++|+++||+|||+.+..+..+.+++. +.++++|.+.++..+++.|++.+...+
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3446666778888777777667778899999999999999999888888875 557888999999999999998888766
Q ss_pred hhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhcc
Q 012629 144 AFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWT 220 (459)
Q Consensus 144 ~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 220 (459)
.... ++.|..+++.+.. .++.+...+..+|..+++.+.+++.+.. +|+..|...+.+.++...+.....+
T Consensus 335 ~~~~-~~~~~~~~~~~a~----~~~~~~~~~~~lg~~ig~~~~G~l~~~~--G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 335 GVFK-YITLNFDVRLSAT----IYLVGFQFAKQLGAVFLSTLAGNLYDSI--GFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHH-HHHHHcCccceee----eeeehHHHHHHHHHHHHHHHHHHHHHhh--CchHHHHHHHHHHHHHHHHHHHHhc
Confidence 6655 6666522222221 1222233345577788888888887654 5677788777766655544443433
No 124
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.27 E-value=3.2e-10 Score=108.40 Aligned_cols=151 Identities=12% Similarity=0.076 Sum_probs=99.3
Q ss_pred chhhhh-hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 58 PYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 58 p~l~~~-~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
..+|.. .+++|.++.+.+.+.+.......++.++.|+++||+|||+.+..+.....+.. .....++.+.+++.+++.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 344444 36789999898887776666666677899999999999998877766555443 3345678888888999988
Q ss_pred hHhhhhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~ 213 (459)
++.+...+.... +..|. ++++...+ .++.. ..+|..+++.+++.+.++ ++|+..|.+..++.++.++
T Consensus 317 ~~~g~~~~~~~~-~~~~~~p~~~g~~~~----~~~~~----~~lg~~~g~~l~G~i~~~--~g~~~~~~~~~~~~~~~~~ 385 (393)
T PRK15011 317 IYIGILGGIGML-YFQDLMPGQAGSATT----LYTNT----SRVGWIIAGSLAGIVAEI--WNYHAVFWFALVMIIATLF 385 (393)
T ss_pred HHHHHHHHHHHH-HHHHhCCCCcchHHH----HHHHH----HHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHH
Confidence 887776665544 56665 33333333 22222 335556666666666654 3567778777777666655
Q ss_pred HHHhhcc
Q 012629 214 IILSSWT 220 (459)
Q Consensus 214 ~~~~~~~ 220 (459)
..+ ..|
T Consensus 386 ~~~-~~~ 391 (393)
T PRK15011 386 CLL-RIK 391 (393)
T ss_pred HHH-hhc
Confidence 554 444
No 125
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.24 E-value=4.7e-10 Score=106.81 Aligned_cols=159 Identities=11% Similarity=0.088 Sum_probs=115.8
Q ss_pred HHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchH
Q 012629 47 SLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYK 125 (459)
Q Consensus 47 ~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~ 125 (459)
++..........+.|...+|.|.++.++|.+.........+..++.|++.||+|+|+.+.++.+...+.. +.++++|.+
T Consensus 215 ~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 294 (382)
T TIGR00902 215 CLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFP 294 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHH
Confidence 3333344334455566667899999999988887777777777789999999999999999999998876 558899999
Q ss_pred HHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHH
Q 012629 126 ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA 205 (459)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~ 205 (459)
.++..+++.|+..+...+.... ++.+. ++..+.. .++.....+.++|..+++.+++++.++.+ + ..|...+
T Consensus 295 ~~~~~q~l~g~~~~~~~~~~~~-~i~~~-~~~~~~~----~q~~~~~~~~g~g~~~g~~~~G~l~~~~g--~-~~~~~~~ 365 (382)
T TIGR00902 295 LIFLLQILHCGTFAVCHLAAMR-YIAAQ-PGSEIAK----LQALYNALAMGGLIAIFTAFAGFIYPTLG--A-GTFVFMA 365 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhC-CHhhHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcc--H-HHHHHHH
Confidence 9999999999999999999866 77765 3333222 22222334566777888888888887654 3 4466666
Q ss_pred HHHHHHHHH
Q 012629 206 CFLAIGMVI 214 (459)
Q Consensus 206 ~~~~i~~~~ 214 (459)
.+.++.+++
T Consensus 366 ~~~~~~~~~ 374 (382)
T TIGR00902 366 IIAAAAFFL 374 (382)
T ss_pred HHHHHHHHH
Confidence 666555444
No 126
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.18 E-value=1.5e-09 Score=103.21 Aligned_cols=145 Identities=14% Similarity=0.141 Sum_probs=96.9
Q ss_pred hhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhh
Q 012629 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLL 141 (459)
Q Consensus 63 ~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (459)
+.+++|.++.+.+.+.........++.++.|++.||+|||+.+..+.+...+.. ...+.++.+.+++.+++.|++.+..
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346789999999887766655566667789999999999999888776655543 3355677888888899999998888
Q ss_pred hhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHH
Q 012629 142 FSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 142 ~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
.+.... ++.|..++.+ .. ..+.... ...+|..+++.+.+.+.+.. +|+..|...+++.++..+...
T Consensus 306 ~~~~~~-~~~~~~~~~~-~~----~~~~~~~-~~~~g~~~g~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 306 AGIGML-YFQDLMPGRA-GA----ATTLYTN-TGRVGWIIAGSVGGILAERW--SYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHH-HHHHhCcchh-hH----HHHHHHH-HHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHHHHHh
Confidence 776655 6666633222 11 1221122 22356666667766666544 556778777776666555543
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.16 E-value=1.8e-09 Score=103.98 Aligned_cols=153 Identities=18% Similarity=0.137 Sum_probs=98.9
Q ss_pred cchhhhhhhccCCCccc----hhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGE----IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGR 131 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~----~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r 131 (459)
.+.++...++.+.+..+ .+.+.....+...+..+..|+++||+|||+.+..+.....++. ...+.++.+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (408)
T PRK09874 239 APILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILR 318 (408)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 45555554544333333 2344344445555677789999999999999998888777665 446677888888999
Q ss_pred HHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHH
Q 012629 132 ILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (459)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~ 208 (459)
++.|++.+...+...+ ++.+. +++++..+.... . ..+|..++|.+++.+.+. ++|+..|.+.+.+.
T Consensus 319 ~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~----~----~~~g~~~gp~~~G~l~~~--~g~~~~f~~~~~~~ 387 (408)
T PRK09874 319 FLLGAADGALLPAVQT-LLVYNSSNQIAGRIFSYNQS----F----RDIGNVTGPLMGAAISAN--YGFRAVFLVTAGVV 387 (408)
T ss_pred HHHHhhhHhhHHHHHH-HHHHhCCcccceeeehHHHH----H----HHHHHHhhHHHHHHHHhh--cchhHHHHHHHHHH
Confidence 9999999988887755 54443 334554442222 2 334555556666666543 45677888888777
Q ss_pred HHHHHHHHhhcc
Q 012629 209 AIGMVIILSSWT 220 (459)
Q Consensus 209 ~i~~~~~~~~~~ 220 (459)
++..+...+..+
T Consensus 388 l~~~~~~~~~~~ 399 (408)
T PRK09874 388 LFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHHHHHH
Confidence 776665554333
No 128
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.16 E-value=2.2e-09 Score=102.55 Aligned_cols=161 Identities=14% Similarity=0.076 Sum_probs=100.7
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhh-CCchHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH-SPQYKILMIGRILG 134 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~-~~~~~~l~~~r~l~ 134 (459)
...+|.+.+++|.+..+.|...+...+...++.++.|++.||+|||+.+..+..+..++. +... .++...+ .-++.
T Consensus 225 ~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~ 302 (393)
T PRK09705 225 IAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVC 302 (393)
T ss_pred HHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHH
Confidence 445566667789999999988888777778888899999999999999988877776664 3332 3332222 23456
Q ss_pred HhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHH
Q 012629 135 GIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (459)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~ 213 (459)
|++.+...+.... ...+. .+++.+.. ..+.....+ .++..++|.+.+++.++.+ .|...|.+.+...++...
T Consensus 303 g~g~g~~~~~~~~-~~~~~~~~~~~~g~----~~g~~~~~~-~~~~~~gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 303 GLGLGGAFPLCLL-LALDHSVQPAIAGK----LVAFMQGIG-FIIAGLAPWFSGVLRSISG-NYLMDWAFHALCVVGLMI 375 (393)
T ss_pred HHhccchHHHHHH-HHHhhcCCHHHHHH----HHHHHHHHH-HHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHH
Confidence 7877777776544 33333 22222222 222222322 3455667777777776544 355667776666666555
Q ss_pred HHHhhccccCCCC
Q 012629 214 IILSSWTENYGDP 226 (459)
Q Consensus 214 ~~~~~~~~~~~~~ 226 (459)
......||+++++
T Consensus 376 ~~~~~~~~~~~~~ 388 (393)
T PRK09705 376 ITLRFAPARFPQL 388 (393)
T ss_pred HHHHhccccccch
Confidence 5555666655443
No 129
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.15 E-value=1.8e-09 Score=103.53 Aligned_cols=147 Identities=21% Similarity=0.257 Sum_probs=94.3
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
.++++...++.|.+ +.+...+...+...++.++.|++.||+|||+.+..+..+.+++. +..+.++.+.+++.+++.|
T Consensus 236 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 313 (399)
T PRK05122 236 ATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34445555566653 34444444444455666789999999999999988888777765 5567788888888999999
Q ss_pred hHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
++.+...+.... ...|. ++|++..+ .++. ...+|..+++.+.+.+.++. +|+..|...+.+.++..
T Consensus 314 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~g----~~~~----~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~ 382 (399)
T PRK05122 314 FGFSLVFPALGV-EAVKRVPPQNRGAALG----AYSV----FLDLSLGITGPLAGLVASWF--GYPSIFLAAALAALLGL 382 (399)
T ss_pred HhHHHHHHHHHH-HHHHhCCHHHHHHHHH----HHHH----HHHHHHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHHHH
Confidence 999988877644 44454 33333333 2222 23344455555556655443 56677877777666665
Q ss_pred HHHH
Q 012629 213 VIIL 216 (459)
Q Consensus 213 ~~~~ 216 (459)
+...
T Consensus 383 ~~~~ 386 (399)
T PRK05122 383 ALTW 386 (399)
T ss_pred HHHH
Confidence 5554
No 130
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.14 E-value=3.6e-09 Score=100.75 Aligned_cols=148 Identities=12% Similarity=0.100 Sum_probs=103.7
Q ss_pred chhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHh
Q 012629 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGI 136 (459)
Q Consensus 58 p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~ 136 (459)
.++|...+|.|.++.+.|.+.+.......+...+.|++.||+|+|+.+..+.+..+++. +.+..++.+.+++..++.|+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 34445557789999899988887777677777889999999999999999988888775 55778899999999999999
Q ss_pred HhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHH
Q 012629 137 ATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (459)
Q Consensus 137 ~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~ 214 (459)
+.+...+.... ++.+.. +++... ..+........+|..+++.+++.+.++.++ ..|+..+.+.++.+..
T Consensus 306 ~~~~~~~~~~~-~~~~~~-~~~~~~----~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~---~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 306 TFTVCHLAAMR-YIAARP-GSEVIR----LQALYSALAMGGSIAIMTVLSGFLYQHLGA---GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHH-HHHHCC-HhhhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHH
Confidence 99988777755 666542 222222 222222334456667777888887765543 3455555555544333
No 131
>PRK03699 putative transporter; Provisional
Probab=99.11 E-value=2.5e-09 Score=102.34 Aligned_cols=148 Identities=13% Similarity=0.080 Sum_probs=100.5
Q ss_pred cchhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHH
Q 012629 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (459)
Q Consensus 57 ~p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (459)
..++|.+. +++|++..+.+.+.+.......++.+..|+++||+|||+.+.....+..+.. +....++.+.+.+..++.
T Consensus 225 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (394)
T PRK03699 225 ISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGL 304 (394)
T ss_pred HHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 34455555 6689999999988887777778888899999999999999888776666554 445677777777778889
Q ss_pred HhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHH
Q 012629 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (459)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~ 213 (459)
|++.+..++...+ +..|..++.. .. ..+... ....+|..++|.+.+.+.+..+ ++..++..+.+..++..
T Consensus 305 G~~~~~~~~~~~~-~~~~~~~~~~-~~----~~g~~~-~~~~~g~~i~p~~~G~l~~~~g--~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 305 GFFSSAIYTTIIT-LGSQQTKVAS-PK----LVNFIL-TCGTIGTMLTFVVTSPIVAHFG--LQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHHHHHHHHHH-HHHHHccCCC-HH----HHHHHH-HhhhHHHHHHHHHHHHHHHHhC--chhhhhhhHHHHHHHHH
Confidence 9888877777644 5555422211 11 112122 2344777788888888776554 45667766666555543
No 132
>PRK03545 putative arabinose transporter; Provisional
Probab=99.11 E-value=5.6e-09 Score=99.81 Aligned_cols=144 Identities=14% Similarity=0.054 Sum_probs=93.2
Q ss_pred hhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHH-H-HHhhCCchHHHHHHHHHHHhHhhh
Q 012629 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-C-ITKHSPQYKILMIGRILGGIATSL 140 (459)
Q Consensus 63 ~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~-~-l~~~~~~~~~l~~~r~l~G~~~~~ 140 (459)
+.+++|.+..+.+.+.+.....+.++.++.|+++||+|||+.. .+..+..++ . +....++.+.+++..++.|++.+.
T Consensus 232 l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~ 310 (390)
T PRK03545 232 VQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMC 310 (390)
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhc
Confidence 3455789998889887777777778888999999999988754 444444443 2 335567788888889999998877
Q ss_pred hhhhhhhhhhhhcc--ccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhh
Q 012629 141 LFSAFESWLVAEHN--KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSS 218 (459)
Q Consensus 141 ~~~~~~~~~i~~~~--~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~ 218 (459)
..+.... .+.|.. +|++..+ .++.... +|..+|+.+++.+.++ ++++..|...+.+.++........
T Consensus 311 ~~~~~~~-~~~~~~~~~~~~~~g----~~~~~~~----~g~~~G~~~~G~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 311 IGLAMQV-KVLKLAPDATDVAMA----LFSGIFN----IGIGAGALLGNQVSLH--LGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred chHHHHH-HHHHhCCCcHHHHHH----HHHHHHH----HHHHHHHHHHHHHHhc--cChhHHHHHHHHHHHHHHHHHHHH
Confidence 6665544 555542 2222222 2222233 4555556666666654 456677888777777666555433
No 133
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.10 E-value=5.2e-09 Score=101.01 Aligned_cols=156 Identities=17% Similarity=0.072 Sum_probs=101.2
Q ss_pred chhhhhhhc-cCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 58 PYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 58 p~l~~~~~~-~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
.++|...++ +|.++.+.|++.+...+...++.++.|++.||.++|+.+..+.++..++. +..+.++.+...+..++.|
T Consensus 244 ~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 323 (417)
T PRK10489 244 VLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFG 323 (417)
T ss_pred HhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 344555565 89999899988877777777788899999999888888888877777765 4567788877888889999
Q ss_pred hHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
++.+...+...+ ++.|. +.|++..+ .++.... +|..+++.+.+.+.+.. +++..+...+....+..
T Consensus 324 ~~~~~~~~~~~~-~~~~~~p~~~~g~~~g----~~~~~~~----~g~~~g~~l~G~l~~~~--g~~~~~~~~~~~~~~~~ 392 (417)
T PRK10489 324 YLSAISSLLQYT-LLQTQTPDEMLGRING----LWTAQNV----TGDAIGAALLGGLGAMM--TPVASASASGFGLLIIG 392 (417)
T ss_pred HHHHHHHHHHHH-HHHhhCCHHHHHHHHH----HHHHHHh----hhHhHHHHHHHHHHHHh--chhhHHHHHHHHHHHHH
Confidence 988877666544 66665 23444333 2222333 44445555555555433 44555665555554444
Q ss_pred HHHHhhccccCC
Q 012629 213 VIILSSWTENYG 224 (459)
Q Consensus 213 ~~~~~~~~~~~~ 224 (459)
.+.....|+.++
T Consensus 393 ~~~~~~~~~~~~ 404 (417)
T PRK10489 393 VLLLLVLGELRR 404 (417)
T ss_pred HHHHHhcccccc
Confidence 444445565443
No 134
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.10 E-value=2.2e-09 Score=101.99 Aligned_cols=142 Identities=15% Similarity=0.119 Sum_probs=95.7
Q ss_pred hhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCch--HHHHHHHHHHH
Q 012629 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQY--KILMIGRILGG 135 (459)
Q Consensus 59 ~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~--~~l~~~r~l~G 135 (459)
..+...+++|.++.+.+.+.+...+...++.++.|+++||+|||+.+..+..+..++. +..+.++. ..++...++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 306 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVF 306 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHH
Confidence 3344557888888888888777777777888899999999999999999888887765 44555543 23445677888
Q ss_pred hHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~ 211 (459)
++.+...+.... ++.|. ++|++..+. . .....+|..++|.+.+.+.++. +|+..|.+.+++.+++
T Consensus 307 ~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~----~----~~~~~~g~~~~~~~~g~l~~~~--g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 307 FTWGGTISLFPS-LVSDIFGPANSAANYGF----L----YTAKAVAGIFGGLIASHALTEI--GFEYTFIVTGAFALTS 374 (377)
T ss_pred HHhccchhccHH-HHHHHhhhhhhhhHhHH----H----HHHHHHHHHHHHHHHHHHHhhh--chhhHHHHHHHHHHHh
Confidence 888777665544 66665 334443332 2 2234466667777777766544 4566777766655543
No 135
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.07 E-value=5.6e-09 Score=100.42 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=100.1
Q ss_pred hhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhH
Q 012629 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIA 137 (459)
Q Consensus 59 ~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~ 137 (459)
.+|.+.++.|.++.+.+...+...+...++.++.|+++||+|||+.+..+.+...++. ...+.++.+.+.+..++.|++
T Consensus 242 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 242 WLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 4566677889999999988888777788888899999999999999888766666654 446677777777788888888
Q ss_pred hhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHH
Q 012629 138 TSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (459)
Q Consensus 138 ~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~ 214 (459)
.+...+...+ +..|. ++|++..+... ....+|..++|.+.+.+.++.+ +|...+.......++..+.
T Consensus 322 ~~~~~~~~~~-~~~~~~p~~~~g~~~g~~~--------~~~~~g~~~g~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 322 VVGGQSVLYA-LAPLFYPTQVRGTGVGAAV--------AVGRLGSMAGPLLAGQLLALGR-STVGVIGASIPVILVAALA 391 (406)
T ss_pred HHhHHHHHHH-HHHHHcchhhhhhhhhHHH--------HhhhHHHHHHhhhHhhhhccCC-chHHHHHHHHHHHHHHHHH
Confidence 7777666655 66665 33444333222 1234666677777777665432 3444555555555444444
Q ss_pred HH
Q 012629 215 IL 216 (459)
Q Consensus 215 ~~ 216 (459)
.+
T Consensus 392 ~~ 393 (406)
T PRK11551 392 AL 393 (406)
T ss_pred HH
Confidence 43
No 136
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.07 E-value=9.7e-09 Score=97.80 Aligned_cols=149 Identities=17% Similarity=0.151 Sum_probs=99.2
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHh
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGI 136 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~ 136 (459)
..++|...++.|.++++.|.+.+.......++..+.|++.||+|+|+.+..+.....++.+... + ........++.|+
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~l~g~ 297 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-S-QAAMAPALFILGA 297 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHH
Confidence 3455666777899988899887777777778888999999999999999888777776543222 2 2334456778888
Q ss_pred HhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHH
Q 012629 137 ATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (459)
Q Consensus 137 ~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~ 215 (459)
+.....|...+ .+.|..++++..+ ..+ ....+..+|..++|.+++++.++.+ |+..|.+.+.+.++.....
T Consensus 298 ~~~~~~p~~~~-~~~~~~~~~~~~~----~~~-~~~~~~~lG~~igp~~~G~l~~~~g--~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 298 AGFTLYPVAMA-WACEKVEHHELVA----MNQ-ALLLSYTVGSLLGPSFTAMLMQNYS--DNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHhHHHHHHH-HHHccCCHHHHHH----HHH-HHHHHHHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHH
Confidence 77777777755 5666533322222 111 2233456777888888888877655 4556776666665544333
No 137
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.07 E-value=8.5e-09 Score=99.92 Aligned_cols=136 Identities=15% Similarity=0.154 Sum_probs=90.8
Q ss_pred hhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
..+.|.+.++ +|.+. +...+...++..+++++.|++.||+|||+ .+..+..+.++...........
T Consensus 43 ~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~-------- 111 (434)
T PRK11663 43 NAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARY--FMGIGLIATGIINILFGFSSSL-------- 111 (434)
T ss_pred HHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCch--hHHHHHHHHHHHHHHHHHHhHH--------
Confidence 5566766654 55544 67777888899999999999999999987 3555555555544443333222
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHH
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGM 418 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~ 418 (459)
+.+.+..++.+++.+..++....++.|.+|+++|++++++.+.. .++.+++.+.+. .++...+..
T Consensus 112 -------~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~--~gw~~~f~~ 182 (434)
T PRK11663 112 -------WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH--YGWRYGMMI 182 (434)
T ss_pred -------HHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ccHHHHHHH
Confidence 24445556778888888888999999999999999998887663 222333334333 355556655
Q ss_pred HHHHH
Q 012629 419 CSIFL 423 (459)
Q Consensus 419 ~~~~~ 423 (459)
.++..
T Consensus 183 ~~i~~ 187 (434)
T PRK11663 183 AGIIA 187 (434)
T ss_pred HHHHH
Confidence 54443
No 138
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.07 E-value=6.1e-10 Score=89.48 Aligned_cols=128 Identities=23% Similarity=0.356 Sum_probs=88.5
Q ss_pred HHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhcc---cccc
Q 012629 83 GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHN---KRGF 158 (459)
Q Consensus 83 ~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~---~r~~ 158 (459)
....+++++.|++.||+|||+.+..+.....++. .....++++.+.+.+++.|++.+...+.... ++.|.. +|++
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ 87 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA-LIADIYPPEERGV 87 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHCChhhhhH
Confidence 3345677789999999999999999988888775 5577889999999999999999988887756 777763 2333
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccc
Q 012629 159 EQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTE 221 (459)
Q Consensus 159 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~ 221 (459)
..+. . .....+|..+++.+.+.+.+.. +|+..+.......++.........||
T Consensus 88 ~~~~----~----~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 88 ALGL----M----SAGIALGPLLGPPLGGVLAQFL--GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHH----H----HHhHHHHHHHhHHhHHHHhccc--chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 3332 2 2234455666666666665444 45666777666666655555544443
No 139
>PRK10054 putative transporter; Provisional
Probab=99.06 E-value=6.9e-09 Score=99.14 Aligned_cols=129 Identities=10% Similarity=0.092 Sum_probs=86.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHH
Q 012629 248 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSS 324 (459)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~ 324 (459)
.++.+.....+...+.. ....+.|.++++.+|.+. +...+...+..+++++..|+++||+|||+ .+..+.....
T Consensus 8 ~~~~l~~~~~~~~~g~~-~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~--~~~~~~~~~~ 84 (395)
T PRK10054 8 STSALLASSLLLTIGRG-ATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR--YMLLAITAFA 84 (395)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch--hHHHHHHHHH
Confidence 34444444444444433 356678888877777655 67777777888999999999999999987 3444444444
Q ss_pred HHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 325 VSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+......+..+. +..++...+.+.+.+...+...++..|..|+++|+++.|+.+.
T Consensus 85 ~~~~~~~~~~~~---------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 139 (395)
T PRK10054 85 SGFIAIPLVNNV---------------TLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYT 139 (395)
T ss_pred HHHHHHHHHhHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHH
Confidence 444433333222 2334445555666666678889999999999999999877665
No 140
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.05 E-value=1.8e-07 Score=86.74 Aligned_cols=314 Identities=15% Similarity=0.123 Sum_probs=173.9
Q ss_pred cchhhhhh-h-ccCCCccchh-hHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHH
Q 012629 57 GPYVYYLY-S-TYGFGKGEIG-QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRI 132 (459)
Q Consensus 57 ~p~l~~~~-~-~~~~s~~~~g-~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~ 132 (459)
-|++.+.. + +.|++..|+. -++-...-.....-++...+.|..+.|++++++.+...+.. +.-+.++...+-+.-+
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~ 102 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQF 102 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHH
Confidence 45444333 3 4899988886 22222111122233378899999999999999998887764 6678899999999999
Q ss_pred HHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 133 LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
..|++.+....-. + ++-...++.+.... ..........|..++. .+++.+....+...+...++......+++
T Consensus 103 ~yg~~~a~evay~-s-Yiys~v~~~~yq~v-ts~~raa~l~g~~~s~----~lgQllvs~~~~sy~~L~~isl~~~~~a~ 175 (412)
T PF01770_consen 103 FYGLATAAEVAYY-S-YIYSVVDKEHYQKV-TSYTRAATLVGRFISS----LLGQLLVSFGGVSYFQLNYISLASVSLAL 175 (412)
T ss_pred HHHHHHHHHHHHH-H-HheeecCHHHHHHH-HHHHHHHHHHHHHHHH----HHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 9999988864443 4 43333222222221 1122223344444444 44444444344455555555444444443
Q ss_pred HHHHhhccccCC-------C----------CC---c---hh---------------hHHHHHHhhhHHhcchhHHHHHHH
Q 012629 213 VIILSSWTENYG-------D----------PS---E---SK---------------DLLTQFRGAAVAIASDEKIALLGA 254 (459)
Q Consensus 213 ~~~~~~~~~~~~-------~----------~~---~---~~---------------~~~~~~~~~~~~~~~~~~~~~~~~ 254 (459)
++.+ .+|..++ + .+ + .. ...+...+..++..++|+++...+
T Consensus 176 ~~~~-fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSl 254 (412)
T PF01770_consen 176 LIAL-FLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSL 254 (412)
T ss_pred HHHH-HcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 3333 2332110 0 00 0 00 001122234445566777766665
Q ss_pred HHHhhhhhhhhhhhhhccccCCCc---cCC--chhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHH
Q 012629 255 IQSLFEGSMYTFVFLWTPALSPND---EEI--PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLL 329 (459)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~ 329 (459)
-..+...+.+- +.+|....-++. .+. -.|.+-+...+.+.++.+..|++..++.+.....+.....+.+..+.+
T Consensus 255 WWa~atcgy~q-v~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~l 333 (412)
T PF01770_consen 255 WWAFATCGYYQ-VINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFL 333 (412)
T ss_pred HHHHHHhHHHH-HHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 55555544443 233333322221 111 126777777788888888899885555544332223333333333333
Q ss_pred HHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 330 PIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.....+. |+..++.++++..+....+....-++....++.-+-.+|+..+
T Consensus 334 m~~t~~I---------------wv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 334 MSFTGNI---------------WVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHhhHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHH
Confidence 3322222 5778888888888888888888888888888888888877554
No 141
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.04 E-value=2e-07 Score=87.90 Aligned_cols=310 Identities=15% Similarity=0.062 Sum_probs=157.8
Q ss_pred HHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccc
Q 012629 78 FIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRG 157 (459)
Q Consensus 78 ~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~ 157 (459)
..+.|..-.+.+.+.+.+.|+.|.|+.++++...+..--+.-+-+|-+.+++...+.|+|.+..+..-.. +++|+..|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~-ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGG-YLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccce-ehhhcCChh
Confidence 4555555667777899999999999999999988877555555678888999999999999998887756 899885555
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc--cCCccc-cc----------hhhHHHHHHHHHHHHH--hhcccc
Q 012629 158 FEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS--FSLGPV-AP----------FDAAACFLAIGMVIIL--SSWTEN 222 (459)
Q Consensus 158 ~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~--~~~~w~-~~----------f~~~~~~~~i~~~~~~--~~~~~~ 222 (459)
...+.....++.+.. +..+|.++--.+...-... ..-+-+ .. ..+..++..+..+... .+.|.+
T Consensus 135 tie~Nisi~Wai~~~-~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~ 213 (461)
T KOG3098|consen 135 TIERNISIFWAIGQS-SLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSK 213 (461)
T ss_pred hHHHHHHHHHHHHHH-HHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCcc
Confidence 554444433332221 2222222211111110000 000110 00 0111111111111111 122221
Q ss_pred CCCC-Cchh--hHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCC--ccCCch----hHHHHHHHHH
Q 012629 223 YGDP-SESK--DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN--DEEIPH----GFIFATFMLA 293 (459)
Q Consensus 223 ~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~ 293 (459)
.... .+.. ...+..+ ..-++.++++.+.+...... .+....+.....|....- ..+.+. +......+++
T Consensus 214 ~~~~~~~~~~~~~~~~l~-~~~~l~~~~~ml~L~~~f~~-tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g 291 (461)
T KOG3098|consen 214 DVVNCKSSSETSFSELLK-LTFKLLKTPKMLLLFPFFFY-TGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLG 291 (461)
T ss_pred chhhhhhhccccHHHHHH-HHHHHhcCHhHHHHHHHHHH-HHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHH
Confidence 1111 1111 1112222 22245566666555433332 223333344555554432 222222 3334444566
Q ss_pred HHHHHHHHHHHhhc---CCCCcchhHHHHHHHHHHHHHHHHHhhhccC---CCCCCCCCccccchhHHHHHHHHHhhhcc
Q 012629 294 SMLGSSLASRLMAR---SPPRVESYMQIVFVVSSVSLLLPIVTSFLVA---PSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (459)
Q Consensus 294 ~~~~~~~~g~l~dr---~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (459)
.+.+....+.+.|| +|+++ .+..+..+......+..+...... +.+.....+........+...+.|++...
T Consensus 292 ~v~~g~~~~~l~~rir~fg~~~--~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 292 EVIGGLDFSILSKRIRGFGRKP--TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHhhhhhhcccCc--chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 77777777777765 45555 233333333333333222221111 11111112222223566677888999888
Q ss_pred hhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 368 FWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.....+..+.+..| +.|..+.++..+
T Consensus 370 ~~t~~~~ii~~~~~-~~~~~~fsi~kf 395 (461)
T KOG3098|consen 370 FNTQRYVIIALLYP-DDRAQAFSLFKF 395 (461)
T ss_pred HHHHHHHHHHHHhc-CchHHHHHHHHH
Confidence 88999999999994 556777666555
No 142
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.03 E-value=3.3e-09 Score=103.54 Aligned_cols=167 Identities=13% Similarity=0.118 Sum_probs=105.7
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCc--cCCch---hHHHHHHHHHHHHHHHHHHHHhhc-CCCCcchhHH
Q 012629 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND--EEIPH---GFIFATFMLASMLGSSLASRLMAR-SPPRVESYMQ 317 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~ 317 (459)
+++|+.+.......+.....+.....++|.|+++. +|.+. +...+...+...++.+++|+++|| +|||+ .+.
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~--~l~ 83 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKK--TMV 83 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHH--HHH
Confidence 34555444444444443333333677888888664 66644 677788888899999999999999 89988 355
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh---hhhhhhhhhh
Q 012629 318 IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA---RSTIMNFFRI 394 (459)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~---r~~~~g~~~~ 394 (459)
.+..+..++.....+.... +...++..+.+++.+...|...+...|.+|+++ |+++.++.+.
T Consensus 84 ~~~~~~~~g~~~~~~~~~~---------------~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~ 148 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYP---------------DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYM 148 (475)
T ss_pred HHHHHHHHHHHHHHhcccH---------------hHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHH
Confidence 5555555554443332211 245566777888888888999999999998754 7777776555
Q ss_pred h------hhHHHHHhhhccCcchhHHHHHHHHHHHHHHHHH
Q 012629 395 P------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVL 429 (459)
Q Consensus 395 ~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (459)
. .++.+++.+.+. .++...+..+++..+.+.+.
T Consensus 149 ~~niG~~ig~~l~g~l~~~--~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 149 SINIGSFISPLLAGVIAEN--YGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHHH
Confidence 3 333444444443 34556666555444444333
No 143
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.01 E-value=1.4e-08 Score=99.91 Aligned_cols=161 Identities=14% Similarity=0.150 Sum_probs=94.2
Q ss_pred cchhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHH-HHH-H--hhCCchHHHHHHH
Q 012629 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SCI-T--KHSPQYKILMIGR 131 (459)
Q Consensus 57 ~p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~-~~l-~--~~~~~~~~l~~~r 131 (459)
..++|.+. +++|.+..+.+.......+...++.+..|+++||+|||+.+..+.+...+ +.. . ..+++...+++.+
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 44556655 56788877766665555565667777899999999999998888765443 221 1 2345677788889
Q ss_pred HHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHH
Q 012629 132 ILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (459)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~ 211 (459)
++.|++.+........ ++.|.-+...+... .+....++. ++..++|.+.+++.+..+ +|+.+++...+..++.
T Consensus 350 ~~~g~~~~~~~g~~~~-~~~~~~p~~~Rg~~----~g~~~~~~~-~~g~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~i~ 422 (490)
T PRK10642 350 LMLAVILNCFTGVMAS-TLPAMFPTHIRYSA----LAAAFNISV-LVAGLTPTLAAWLVESTQ-NLMMPAYYLMVVAVIG 422 (490)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHCCCccchHH----HHHHHHHHH-HHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHH
Confidence 9998877666555433 66665333333321 222223333 223445555555544332 3455555545444444
Q ss_pred HHHHHhhccccCCC
Q 012629 212 MVIILSSWTENYGD 225 (459)
Q Consensus 212 ~~~~~~~~~~~~~~ 225 (459)
.+..+ ..||+++.
T Consensus 423 ~~~~~-~~pes~~~ 435 (490)
T PRK10642 423 LITGV-TMKETANR 435 (490)
T ss_pred HHHHH-HhccccCC
Confidence 44443 55776543
No 144
>PRK09952 shikimate transporter; Provisional
Probab=99.00 E-value=1.8e-08 Score=97.72 Aligned_cols=158 Identities=15% Similarity=0.085 Sum_probs=96.4
Q ss_pred chhhhh-hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH--hh-C-CchHHHHHHH
Q 012629 58 PYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT--KH-S-PQYKILMIGR 131 (459)
Q Consensus 58 p~l~~~-~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~--~~-~-~~~~~l~~~r 131 (459)
.+.|.. .+++|.+..+...+.......+.++.++.|+++||+|||+.+..+.++..++. .. .. . ++...+++..
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSI 350 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 344443 36678877655444334444455667789999999999999888876655442 11 11 2 2344445566
Q ss_pred HHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHH
Q 012629 132 ILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (459)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~ 211 (459)
++.+++.+...+...+ ++.|.-+...+.. ..+....++..++..++|.+.+++.+..+.+|+.++...+...++.
T Consensus 351 ~l~~~~~~~~~~~~~~-~~~e~~p~~~r~t----g~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~ 425 (438)
T PRK09952 351 MLANIAHDMVVCVQQP-MFTEMFGASYRYS----GAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLIS 425 (438)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHCCcchhHH----HHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 7778887777666645 7777633333222 2333344555577777888888877655455777777666666665
Q ss_pred HHHHHhhccc
Q 012629 212 MVIILSSWTE 221 (459)
Q Consensus 212 ~~~~~~~~~~ 221 (459)
.+..+ ..+|
T Consensus 426 ~v~~~-~~~~ 434 (438)
T PRK09952 426 AMTAL-LMKD 434 (438)
T ss_pred HHHHH-Hccc
Confidence 55544 4454
No 145
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.00 E-value=4.5e-11 Score=116.93 Aligned_cols=258 Identities=12% Similarity=0.089 Sum_probs=3.0
Q ss_pred hhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhh----CC----
Q 012629 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH----SP---- 122 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~----~~---- 122 (459)
.+++....+..+.+.|+++.++.|++.+..-+...+..++..+..+|..|-|.+-.+.++.+++. +.++ .+
T Consensus 18 ~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~ 97 (539)
T PF03137_consen 18 VSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSY 97 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcc
Confidence 34444555668889999999999999888888788888889999999888888888888888864 3221 00
Q ss_pred ------------------------------------------chHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccch
Q 012629 123 ------------------------------------------QYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQ 160 (459)
Q Consensus 123 ------------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~ 160 (459)
-+..++++.++.|+|....++...+ |+.|..++....
T Consensus 98 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t-YiDDnv~~~~sp 176 (539)
T PF03137_consen 98 EEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT-YIDDNVSKKNSP 176 (539)
T ss_dssp ------------------------------------------------------SSS-----------------------
T ss_pred ccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee-eeccccccccCc
Confidence 0236788999999999999999977 999984444433
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc------------cCCccc----cchhhHHHHHHHHHHHHH---hhccc
Q 012629 161 QWLSITFSKAIFLGNGLVAILSGLFGNLLVDS------------FSLGPV----APFDAAACFLAIGMVIIL---SSWTE 221 (459)
Q Consensus 161 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~------------~~~~w~----~~f~~~~~~~~i~~~~~~---~~~~~ 221 (459)
-..+. ......+|..+|.++|+.....-.+. .+-+|. .-|.+.+.+.++..+... +.+|+
T Consensus 177 lYiGi-~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 177 LYIGI-LYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cchhh-hhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 32222 22233334444444443333221110 111333 334444444443333322 23343
Q ss_pred cCCCCC-------chh----h-------------HHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCC
Q 012629 222 NYGDPS-------ESK----D-------------LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (459)
Q Consensus 222 ~~~~~~-------~~~----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (459)
+++.++ +.+ + ..++..+..+.+++||.+....+....-.....+ ..++.|.|++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G-~~tF~pKylE~ 334 (539)
T PF03137_consen 256 TSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSG-FATFLPKYLES 334 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 310000 000 0 0111223445677888887777666666666555 58899999999
Q ss_pred ccCCchhHHHHHHH----HHHHHHHHHHHHHhhcCCCCc
Q 012629 278 DEEIPHGFIFATFM----LASMLGSSLASRLMARSPPRV 312 (459)
Q Consensus 278 ~~~~~~~~~~~~~~----~~~~~~~~~~g~l~dr~g~~~ 312 (459)
+++.+++......+ -+..+|.+++|++.+|++-+.
T Consensus 335 QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~ 373 (539)
T PF03137_consen 335 QFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSA 373 (539)
T ss_dssp ---------------------------------------
T ss_pred HhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcH
Confidence 99987643332222 357788999999999986544
No 146
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.99 E-value=1.5e-08 Score=99.63 Aligned_cols=252 Identities=13% Similarity=0.142 Sum_probs=160.8
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhC--------------
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-------------- 121 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~-------------- 121 (459)
...+..+.+.|+++.++.|.+.+..-+...+...+..+..-|.-|-|.+-.++++++++. +.++-
T Consensus 117 ~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 117 NSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 444456778999999999987666555555555578899999999999999999998865 43321
Q ss_pred ------C-----------------------------c--hH-HHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhH
Q 012629 122 ------P-----------------------------Q--YK-ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWL 163 (459)
Q Consensus 122 ------~-----------------------------~--~~-~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~ 163 (459)
+ + ++ .++++.++.|+|....++...+ |+.|..++....-..
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGis-YiDDnvk~~~SplYl 275 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGIS-YIDDNVKKKNSPLYL 275 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCc-cccccccccCCcHHH
Confidence 0 0 22 5678899999999999999977 999985555544444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcccc---------cCCccccc----hhhHHHHHHHHHHHHHhhccccCCCCC---
Q 012629 164 SITFSKAIFLGNGLVAILSGLFGNLLVDS---------FSLGPVAP----FDAAACFLAIGMVIILSSWTENYGDPS--- 227 (459)
Q Consensus 164 ~~~~~~~~~~g~~~g~~~~~~l~~~l~~~---------~~~~w~~~----f~~~~~~~~i~~~~~~~~~~~~~~~~~--- 227 (459)
+..+ ...++|-++|.++|++...+-.+. .+-+|... |++.+.+.++..+..+ ..|++.++..
T Consensus 276 gi~~-~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f-~fPk~lp~~~~~~ 353 (735)
T KOG3626|consen 276 GILY-SMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLF-FFPKELPKSQKRK 353 (735)
T ss_pred HHHH-HHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH-hCcccCccccccc
Confidence 4433 344555555555555554443332 11244433 4445555554444444 4444322111
Q ss_pred ----------------ch---hhHHHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCchhHHHH
Q 012629 228 ----------------ES---KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFA 288 (459)
Q Consensus 228 ----------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (459)
+. .+..++..+..+.+++||.+....+...+-.....+ ..+|+|.|++.+++.+++....
T Consensus 354 ~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G-~~tFlPKyLE~Qfg~sas~An~ 432 (735)
T KOG3626|consen 354 RARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITG-YITFLPKYLETQFGISASLANI 432 (735)
T ss_pred hhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhh-HHHhhHHHHHHHcCCCHHHHHH
Confidence 00 012234445667788888887777666665555454 5889999999999997753332
Q ss_pred ---HHH-HHHHHHHHHHHHHhhcCCCCc
Q 012629 289 ---TFM-LASMLGSSLASRLMARSPPRV 312 (459)
Q Consensus 289 ---~~~-~~~~~~~~~~g~l~dr~g~~~ 312 (459)
..+ -+..+|.+++|++.+|+..+.
T Consensus 433 l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 433 LTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred HhhhhhhhhhhhhhhccceeeeeecccH
Confidence 222 346778899999999986554
No 147
>PRK12382 putative transporter; Provisional
Probab=98.98 E-value=2.6e-08 Score=95.33 Aligned_cols=147 Identities=21% Similarity=0.326 Sum_probs=96.0
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
..+.+...++.|.+. .+...........++.++.|++.||+|+||.+..+..+.+++. +..+.++.+.+++..++.|
T Consensus 236 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 236 GTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 344445556666553 3444444444455667789999999999999999888887775 4567788888888999999
Q ss_pred hHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
++.+...+.... .+.|. ++|++..+ ..+. ...+|..+++.+.+.+.++.+ |+..|...+.+.++..
T Consensus 314 ~~~~~~~~~~~~-~~~~~~~~~~~g~~~g----~~~~----~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~~~ 382 (392)
T PRK12382 314 AGCSLIFPALGV-EVVKRVPSQVRGTALG----GYAA----FQDIAYGVSGPLAGMLATSFG--YPSVFLAGAISAVLGI 382 (392)
T ss_pred HHHHhHHHHHHH-HHHHhcCHHHHHHHHH----HHHH----HHHHHHHHHHHHHHHHHHHhC--chHHHHHHHHHHHHHH
Confidence 999887776644 55554 33334333 2222 233555666667777666554 5667777776666655
Q ss_pred HHHH
Q 012629 213 VIIL 216 (459)
Q Consensus 213 ~~~~ 216 (459)
....
T Consensus 383 ~~~~ 386 (392)
T PRK12382 383 IVTI 386 (392)
T ss_pred HHHH
Confidence 5544
No 148
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.95 E-value=4.7e-08 Score=93.46 Aligned_cols=161 Identities=14% Similarity=0.066 Sum_probs=90.8
Q ss_pred HHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHH-HhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH-hh---
Q 012629 47 SLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG-SSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT-KH--- 120 (459)
Q Consensus 47 ~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~-~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~-~~--- 120 (459)
++...+......+.+...+|.|++++++|.+...... ...++..+.|++.||+|+|+.+..+..+.++.. .. ..
T Consensus 218 ~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (390)
T TIGR02718 218 LLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAF 297 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3333333333334455667789999999988776543 334456689999999999999988776653322 11 11
Q ss_pred --CCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccc
Q 012629 121 --SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (459)
Q Consensus 121 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~ 198 (459)
.++...+.....+.+++.+...+...+ ...+...+++..+......+.. ..+|..++|.+++.+.++. +++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~----~~lg~~~g~~~~G~l~~~~--G~~ 370 (390)
T TIGR02718 298 WLAPGIAVAWSCSAFGSLITGITSVAIYT-AFMRFAGDGDQAGTDVTAVQST----RDLGELIASSIAGYLTDRF--GYA 370 (390)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCcccchHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH--ccH
Confidence 233444455555666666666665544 4333321211111111122222 2456666667777766544 456
Q ss_pred cchhhHHHHHHHHHHH
Q 012629 199 APFDAAACFLAIGMVI 214 (459)
Q Consensus 199 ~~f~~~~~~~~i~~~~ 214 (459)
..|...+.+.++..+.
T Consensus 371 ~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 371 GGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6777766665554443
No 149
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.94 E-value=2.5e-08 Score=95.47 Aligned_cols=150 Identities=8% Similarity=0.070 Sum_probs=97.5
Q ss_pred HHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHH
Q 012629 255 IQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI 331 (459)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~ 331 (459)
..++...+.+. ...+.|.++++..+.+. |...+...+...+.+++.|+++||+|||+ .+..+.....+......
T Consensus 18 ~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~--~l~~~~~~~~~~~~~~~ 94 (400)
T PRK11646 18 DNMLVVLGFFV-VFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKP--MIVTGMLMRAAGFATMA 94 (400)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchH--HHHHHHHHHHHHHHHHH
Confidence 33344444343 35566777766666655 66666667777888899999999999987 35555555555444433
Q ss_pred HhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhh
Q 012629 332 VTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLY 405 (459)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~ 405 (459)
...+. +.+.+...+.+++.+...|...+++.|.+|+++|+++.|+.+.. .++.+++.+.
T Consensus 95 ~~~~~---------------~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 95 IAHEP---------------WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred HhccH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32211 35566677778888877888899999999999999999886652 3445555554
Q ss_pred ccCcchhHHHHHHHHHHHHH
Q 012629 406 NVDAFPITVMFGMCSIFLLV 425 (459)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~ 425 (459)
+ .++...+...++..++
T Consensus 160 ~---~g~~~~f~~~~~~~~~ 176 (400)
T PRK11646 160 Q---YDFRLVCATGAVLFVL 176 (400)
T ss_pred H---hhHHHHHHHHHHHHHH
Confidence 2 3455555554444333
No 150
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.93 E-value=3.9e-08 Score=96.34 Aligned_cols=153 Identities=10% Similarity=-0.003 Sum_probs=92.1
Q ss_pred chhhhh-hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-H--HhhCCchHHHHHHHHH
Q 012629 58 PYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-I--TKHSPQYKILMIGRIL 133 (459)
Q Consensus 58 p~l~~~-~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l--~~~~~~~~~l~~~r~l 133 (459)
..+|.. .+++|++..+.+...+.....+.++.+++|+++||+|||+.+........++. + ....++...+.+.+++
T Consensus 279 ~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (467)
T PRK09556 279 NWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFA 358 (467)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 344544 46799999998888777777788888999999999999988766544444332 2 2344566667778888
Q ss_pred HHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccc----------cCCccccchhh
Q 012629 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS----------FSLGPVAPFDA 203 (459)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~----------~~~~w~~~f~~ 203 (459)
.|+........... ...|..++..+.. ..+.....++..|..++|.+.+.+.+. ...+|+..|.+
T Consensus 359 ~G~~~~~~~~~~~~-~~~~~~p~~~~g~----a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~ 433 (467)
T PRK09556 359 LGFLVFGPQLLIGV-AAVGFVPKKAIGV----ANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAA 433 (467)
T ss_pred HHHHHhhHHHHHHH-HHHhhcchhhHHH----HHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHH
Confidence 88644333222112 4445533322222 233333344434666777777777760 02346777777
Q ss_pred HHHHHHHHHHHH
Q 012629 204 AACFLAIGMVII 215 (459)
Q Consensus 204 ~~~~~~i~~~~~ 215 (459)
..+..+++.+..
T Consensus 434 ~~~~~~~~~~~~ 445 (467)
T PRK09556 434 LDIAAIGCICLM 445 (467)
T ss_pred HHHHHHHHHHHH
Confidence 666555544433
No 151
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.93 E-value=1.3e-08 Score=97.74 Aligned_cols=109 Identities=11% Similarity=0.040 Sum_probs=78.6
Q ss_pred hhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
....|.+. +.++.+. +...+...++..++.++.|+++||+|||+ .+..+..+..+......+....
T Consensus 32 ~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~-------- 100 (405)
T TIGR00891 32 ALVLAEVA-GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRL--PMVTSIVLFSAGTLACGFAPGY-------- 100 (405)
T ss_pred HHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHhccH--------
Confidence 44445443 3345443 67778888999999999999999999988 3444444444444433332222
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+..++..++.|++.+...+...+++.|.+|+++|+++.++.+.
T Consensus 101 -------~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 143 (405)
T TIGR00891 101 -------ITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLIS 143 (405)
T ss_pred -------HHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHH
Confidence 3556677888999998889999999999999999999887776
No 152
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.93 E-value=3.8e-08 Score=92.35 Aligned_cols=156 Identities=21% Similarity=0.222 Sum_probs=111.4
Q ss_pred hhhhccchhhhhhhcc-CCCccchhhHHHHHHHHhhhhhccccchhcccCcch-hhHHHHHHHHHHH-HHhhCCchHHHH
Q 012629 52 GDWLQGPYVYYLYSTY-GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR-ACVTYCLTYILSC-ITKHSPQYKILM 128 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~-~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~-~~~~~~~~~~~~~-l~~~~~~~~~l~ 128 (459)
.........|...++. |.++.+.+...........++.++.|++.||+|||+ .+..+..+..++. .....++.+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 269 (352)
T cd06174 190 GYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLL 269 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3333355556666554 889999998888888888888899999999999999 9999988888876 557788888999
Q ss_pred HHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHH
Q 012629 129 IGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (459)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~ 208 (459)
+..++.|++.+...+...+ ++.|..+++.+.. ..+ .......++..+++.+.+.+.+. .+|+..+.+.+++.
T Consensus 270 ~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~-~~~~~~~~~~~i~~~i~g~l~~~--~~~~~~~~~~~~~~ 341 (352)
T cd06174 270 VALLLLGFGLGFAFPALLT-LASELAPPEARGT----ASG-LFNTFGSLGGALGPLLAGLLLDT--GGYGGVFLILAALA 341 (352)
T ss_pred HHHHHHHHHHhccchhHHH-HHHhhcCHHHHHH----HHH-HHHHHHHHHHHHHHHHHHHHhcc--cCcchHHHHHHHHH
Confidence 9999999999999888766 7777633222222 111 22223445666666777776653 45567788777777
Q ss_pred HHHHHHH
Q 012629 209 AIGMVII 215 (459)
Q Consensus 209 ~i~~~~~ 215 (459)
++..+..
T Consensus 342 ~i~~i~~ 348 (352)
T cd06174 342 LLAALLL 348 (352)
T ss_pred HHHHHHh
Confidence 6665544
No 153
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.93 E-value=5.1e-08 Score=93.74 Aligned_cols=140 Identities=11% Similarity=0.084 Sum_probs=94.1
Q ss_pred hhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
....| .++++++.+. ++..+...++..++++..|++.||+|||+ .+..+..+.++......+..+.
T Consensus 28 ~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~--~~~~~~~~~~~~~~~~~~~~~~-------- 96 (412)
T TIGR02332 28 GFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR--WIAGIMVLWGIASTATMFATGP-------- 96 (412)
T ss_pred HHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH--HHHHHHHHHHHHHHHHHHhcCH--------
Confidence 44445 4555666654 67778888899999999999999999998 3455555555444444333222
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhh------hHHHHHhhhcc----CcchhHH
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL------NIFVCVVLYNV----DAFPITV 414 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~------~~~~~~~l~~~----~~~~~~~ 414 (459)
+.+++.-++.|++.+...|....++.|.+|+++|+++.++.+... +..+++.+... +..++..
T Consensus 97 -------~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~ 169 (412)
T TIGR02332 97 -------ESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQW 169 (412)
T ss_pred -------HHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhH
Confidence 355677788899999888988899999999999999998887642 22333333221 2245666
Q ss_pred HHHHHHHHHHH
Q 012629 415 MFGMCSIFLLV 425 (459)
Q Consensus 415 ~~~~~~~~~~~ 425 (459)
.+...++..++
T Consensus 170 ~f~~~~~~~l~ 180 (412)
T TIGR02332 170 LFLLEGFPSVI 180 (412)
T ss_pred HHHHHHHHHHH
Confidence 66665554443
No 154
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.93 E-value=2.2e-08 Score=96.67 Aligned_cols=164 Identities=12% Similarity=0.102 Sum_probs=99.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcC-CCCcchhHHHHHHHH
Q 012629 248 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARS-PPRVESYMQIVFVVS 323 (459)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~l~~~~~~~ 323 (459)
.++.............|. +..+.|.|+++.+|.+. +...........++.+++|+++||+ |||+ .+..+..+.
T Consensus 10 ~l~~l~~~~~~e~fs~Yg-~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr--~iliG~il~ 86 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYG-MRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRM--AVMLGALLM 86 (493)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH--HHHHHHHHH
Confidence 344444444444455554 57789999887777765 4555666677788899999999998 9887 355555555
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChh--hhhhhhhhhhhhh-----
Q 012629 324 SVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE--ARSTIMNFFRIPL----- 396 (459)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~--~r~~~~g~~~~~~----- 396 (459)
.+...+....... . ....++..+..++.+...+...+++.|.+|++ .|.++.++.....
T Consensus 87 ~lg~lll~~~~~~----------~----~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~ 152 (493)
T PRK15462 87 AIGHVVLGASEIH----------P----SFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSI 152 (493)
T ss_pred HHHHHHHHHhhcc----------h----hHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHH
Confidence 4444332211110 0 12334445555677777787889999999976 5888887766643
Q ss_pred -hHHHHHhhhccCcchhHHHHHHHHHHHHHHHHHH
Q 012629 397 -NIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQ 430 (459)
Q Consensus 397 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (459)
++.+.+.+.+. .++...|..+++..+++.+..
T Consensus 153 iap~l~g~L~~~--~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 153 IAPIACGYAQEE--YSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHhh--hChHHHHHHHHHHHHHHHHHH
Confidence 22333444333 356666666655554444443
No 155
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.92 E-value=1.1e-08 Score=96.18 Aligned_cols=142 Identities=22% Similarity=0.275 Sum_probs=93.4
Q ss_pred hhhccccCCCccCCc---hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 268 FLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
....|.+..+.++.+ .+...+...++..++.++.|+++||+|||+ .+..+..+..+......+....
T Consensus 16 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~l~~~~~~~~~~~~~~~~~~~~-------- 85 (352)
T PF07690_consen 16 SPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR--VLIIGLLLFALGSLLLAFASNF-------- 85 (352)
T ss_dssp HHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH--HHHHHHHHHHHHHHHHHHHCCH--------
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee--eEeehhhhhhhHHHHhhhhhhH--------
Confidence 334453444445543 377888888999999999999999999887 3555555555553333322222
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHH
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGM 418 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~ 418 (459)
+..++..++.|++.+...+....++.|.+|+++|++.+++.+.. .++.+++.+.+. .++...+..
T Consensus 86 -------~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~--~~~~~~~~~ 156 (352)
T PF07690_consen 86 -------WLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY--FGWRWAFLI 156 (352)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--CHHCCHHHH
T ss_pred -------HHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc--ccccccccc
Confidence 35677788899999989999999999999999999998887763 223333433322 345445555
Q ss_pred HHHHHHHHHH
Q 012629 419 CSIFLLVASV 428 (459)
Q Consensus 419 ~~~~~~~~~~ 428 (459)
.++..++..+
T Consensus 157 ~~~~~~~~~i 166 (352)
T PF07690_consen 157 SAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHH
T ss_pred ccchhhhhhh
Confidence 5555555443
No 156
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.92 E-value=3.1e-08 Score=94.52 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=76.9
Q ss_pred hccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 012629 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (459)
Q Consensus 270 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (459)
..|.+. +.++.+. +...+...++..++.++.|++.||+|||+ .+..+..+..+...........
T Consensus 27 ~~p~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~--~~~~~~~~~~~~~~~~~~~~~~---------- 93 (385)
T TIGR00710 27 AFPEIA-ADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRP--VLLLGLFIFALSSLGLALSNNI---------- 93 (385)
T ss_pred cHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH--HHHHHHHHHHHHHHHHHHHccH----------
Confidence 344443 3355543 67778888889999999999999999987 3444444444444433332222
Q ss_pred ccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 347 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+...+..++.|++.+...+...+++.|.+|+++|++..++.+.
T Consensus 94 -----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (385)
T TIGR00710 94 -----ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMP 136 (385)
T ss_pred -----HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 3556677888888888889999999999999999999887765
No 157
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.91 E-value=4.3e-08 Score=95.19 Aligned_cols=113 Identities=18% Similarity=0.275 Sum_probs=75.3
Q ss_pred hhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
....|.+.+. |.+. +...+...++..++.++.|+++||+|||+. +..+..+..+........... .
T Consensus 47 ~~~~p~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~--~~~~~~~~~~~~~~~~~~~~~-------~ 115 (438)
T TIGR00712 47 ALAMPYLVEQ--GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVF--LPAGLILSAAVMLLMGFVPWA-------T 115 (438)
T ss_pred HhhhHHHHHc--CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCcee--hHHHHHHHHHHHHHHhccccc-------c
Confidence 3345544443 4433 677788888999999999999999998873 444444444433332222111 0
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
.+ .+...+..++.|++.+..++.....+.|.+|+++|+++.|+.+..
T Consensus 116 ~~----~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~ 162 (438)
T TIGR00712 116 SS----IAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCA 162 (438)
T ss_pred ch----HHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHH
Confidence 00 123445567778888888888889999999999999999887764
No 158
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.91 E-value=4.8e-08 Score=94.93 Aligned_cols=83 Identities=17% Similarity=0.155 Sum_probs=62.1
Q ss_pred CccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhC-CchHHHHHHHHHHHhHhhhhhhhhhh
Q 012629 70 GKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-PQYKILMIGRILGGIATSLLFSAFES 147 (459)
Q Consensus 70 s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (459)
+..+.+.+.....+...++.+++++++||+|+|+++..+..+.+++. ...+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666666667677888899999999999999999988777765 33443 45667777888899998888777655
Q ss_pred hhhhhc
Q 012629 148 WLVAEH 153 (459)
Q Consensus 148 ~~i~~~ 153 (459)
+++|.
T Consensus 335 -~~~~~ 339 (437)
T TIGR00792 335 -LVADT 339 (437)
T ss_pred -HHhhh
Confidence 65554
No 159
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.90 E-value=4.7e-08 Score=99.08 Aligned_cols=108 Identities=15% Similarity=0.194 Sum_probs=77.8
Q ss_pred hhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 012629 269 LWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (459)
Q Consensus 269 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (459)
...|.+.. .++.+. +.+.+...++.+++.++.|+++||+|||+. +..+..+.++..++..+....
T Consensus 188 ~ilp~i~~-~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~--lii~lil~~i~~ll~afa~s~--------- 255 (742)
T TIGR01299 188 FVLPSAEK-DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQC--LLICLSVNGFFAFFSSFVQGY--------- 255 (742)
T ss_pred HHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH--HHHHHHHHHHHHHHHHHHhhH---------
Confidence 34444433 344433 667778889999999999999999999983 444444444444333332222
Q ss_pred CccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+.++++-++.|++.+...+...+++.|.+|++.|++..++.+.
T Consensus 256 ------~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~ 298 (742)
T TIGR01299 256 ------GFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCM 298 (742)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 3566778889999999999999999999999999998877665
No 160
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.89 E-value=5.4e-08 Score=93.25 Aligned_cols=139 Identities=13% Similarity=0.122 Sum_probs=94.8
Q ss_pred CCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhh
Q 012629 68 GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFE 146 (459)
Q Consensus 68 ~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (459)
+.+..+.|.+.+...+...+..+..|++.||+|||+.+.++..+.+++. +...++|.+.+++.++++|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667877777777677777789999999999999999988888865 446788888889999999988766544433
Q ss_pred hhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHH
Q 012629 147 SWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (459)
Q Consensus 147 ~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~ 214 (459)
. +..+. ++|.... ..+.+......+|..+++.+++++.+.. +|+..|.+.+++.++....
T Consensus 330 ~-~~~~~~~~~~~at-----~~~~~~~~~~~lg~~~~~~l~G~l~~~~--G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 330 K-YITSQFDVRLSAT-----IYLIGFQFAKQLAMIFLSTLAGNMYDSI--GFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred H-HHHHhCCcceEEE-----eehHHHHHHHHHHHHHHHHhHHHHHHhc--ccHHHHHHHHHHHHHHHHH
Confidence 3 44443 3333221 1122223345577777778888877644 5677788777766655443
No 161
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.89 E-value=1.1e-07 Score=91.96 Aligned_cols=154 Identities=16% Similarity=0.128 Sum_probs=111.4
Q ss_pred hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcc--hhhHHHHHHHHHH-HHHhh--------CCchHHHHHHHHH
Q 012629 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK--RACVTYCLTYILS-CITKH--------SPQYKILMIGRIL 133 (459)
Q Consensus 65 ~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr--~~~~~~~~~~~~~-~l~~~--------~~~~~~l~~~r~l 133 (459)
+++|++..++..+.....+.+.+++.++|++.||+|.| +++..+++++.+. ....+ .++-+.+.+.-++
T Consensus 310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~ 389 (477)
T PF11700_consen 310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVL 389 (477)
T ss_pred HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHH
Confidence 68999999988777777788888889999999999999 8988888887553 33233 5677889999999
Q ss_pred HHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHH
Q 012629 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (459)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~ 213 (459)
.|+..|...+...+ +.+|.-++++... .++.... ..-....+||.+.+.+.+..+ .-|..+....++.++.++
T Consensus 390 ~G~~~G~~qs~sRs-~~~~LiP~g~e~e----fFgly~i-~gk~ss~lGPll~g~i~~~tg-~~r~g~~~l~~lf~~gl~ 462 (477)
T PF11700_consen 390 IGLFMGGIQSASRS-LFSRLIPPGREAE----FFGLYAI-TGKASSWLGPLLFGLITDATG-SQRYGFLFLLVLFLIGLI 462 (477)
T ss_pred HHHHhhhHHHHHHH-HHHHhCCCchhhH----HHHHHHH-HHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHH
Confidence 99999999999977 8888866666644 3332222 233556677777777666554 245667766666666666
Q ss_pred HHHhhccccCCCC
Q 012629 214 IILSSWTENYGDP 226 (459)
Q Consensus 214 ~~~~~~~~~~~~~ 226 (459)
+.. +.+++++++
T Consensus 463 ll~-~v~~~~g~~ 474 (477)
T PF11700_consen 463 LLF-FVDVEKGRE 474 (477)
T ss_pred HHh-hccchhhhh
Confidence 654 555544433
No 162
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.89 E-value=8.8e-08 Score=93.39 Aligned_cols=112 Identities=15% Similarity=0.291 Sum_probs=76.5
Q ss_pred hhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 012629 269 LWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (459)
Q Consensus 269 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (459)
...|.+.++ +.+. +...+...++..++.++.|+++||+|||+ .+..+..+..+......+.... ..
T Consensus 50 ~~~p~l~~~--g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~--~l~~~~~~~~i~~~~~~~~~~~-------~~ 118 (452)
T PRK11273 50 LAMPYLVEQ--GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV--FLPAGLILAAAVMLFMGFVPWA-------TS 118 (452)
T ss_pred HhhHHHHHc--CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCch--hHHHHHHHHHHHHHHHHhhhcc-------cc
Confidence 445654443 5433 67778888999999999999999999987 3555554444444433332211 00
Q ss_pred CccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
+ .+..++...+.|++.+...+.....+.|.+|+++|++++|+.+..
T Consensus 119 ~----~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 164 (452)
T PRK11273 119 S----IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCA 164 (452)
T ss_pred c----HHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 0 124455667778888888887888889999999999999887664
No 163
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.88 E-value=1.6e-07 Score=89.11 Aligned_cols=170 Identities=16% Similarity=0.207 Sum_probs=109.0
Q ss_pred HHHHHhhhhccchhhhhhhccC-CCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhC-Cc
Q 012629 47 SLMMAGDWLQGPYVYYLYSTYG-FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS-PQ 123 (459)
Q Consensus 47 ~~~~~~~~~~~p~l~~~~~~~~-~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~-~~ 123 (459)
++..........+.+...+|.| .+....|.+.+.+.+.-.+.-...+++..|+|.|+++.++.+.+++=. +.+.. ++
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~ 296 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3333344444444445567777 666667766565555444444578999999999999999999988854 55554 55
Q ss_pred hHHHHH----HHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCC----
Q 012629 124 YKILMI----GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL---- 195 (459)
Q Consensus 124 ~~~l~~----~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~---- 195 (459)
.+.... ...++|+..+....+... ++.+..+++.+.. .++....+..++|..+|..++|++.++.+-
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~-yi~~~~p~~~~at----~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~ 371 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVR-YIDRIAPPELRAT----AQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMF 371 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHH-HHHHhCCccchHH----HHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhh
Confidence 544333 345699999999998866 8888765655555 344444455667777777888888776543
Q ss_pred ccccchhhHHHHHHHHHHHHHhhccc
Q 012629 196 GPVAPFDAAACFLAIGMVIILSSWTE 221 (459)
Q Consensus 196 ~w~~~f~~~~~~~~i~~~~~~~~~~~ 221 (459)
+|...+.+.+.+.++..++.....+|
T Consensus 372 ~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 372 DWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 34444555555555544444434443
No 164
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.88 E-value=7.9e-08 Score=87.88 Aligned_cols=148 Identities=18% Similarity=0.204 Sum_probs=105.9
Q ss_pred hhhccccCCCc-cCC-chhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 012629 268 FLWTPALSPND-EEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (459)
Q Consensus 268 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (459)
+.-.|.+.++. ++. +.|.+.+.+.+..-++..+.|.++||.+.|+ .+..+..+.+++.++..+....
T Consensus 49 ~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~--fm~~gLilsai~nil~Gfs~s~--------- 117 (448)
T COG2271 49 NLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY--FMAFGLILSAIVNILFGFSPSL--------- 117 (448)
T ss_pred hhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce--eehHHHHHHHHHHHHHhhhhHH---------
Confidence 44556655554 333 2378888999999999999999999999887 3667777777777776666544
Q ss_pred CccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhhhH---HHH-----HhhhccCcchhHHHHH
Q 012629 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNI---FVC-----VVLYNVDAFPITVMFG 417 (459)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~---~~~-----~~l~~~~~~~~~~~~~ 417 (459)
+.+.+...+.|...|..+|.+...+..-+|+++||+..++.+++-|. +.. +.+... .++...|.
T Consensus 118 ------~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~--~~w~~~f~ 189 (448)
T COG2271 118 ------FLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH--GGWRAAFY 189 (448)
T ss_pred ------HHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc--cchhHHHH
Confidence 46777888999999999999999999999999999999988885222 111 222222 25666666
Q ss_pred HHHHHHHHHHHHHhhhh
Q 012629 418 MCSIFLLVASVLQRRLM 434 (459)
Q Consensus 418 ~~~~~~~~~~~~~~~~~ 434 (459)
.-+++.++..+......
T Consensus 190 ~pgiiaiival~~~~~~ 206 (448)
T COG2271 190 FPGIIAIIVALILLFLL 206 (448)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 66666655544444433
No 165
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.87 E-value=1.6e-07 Score=89.53 Aligned_cols=144 Identities=13% Similarity=0.048 Sum_probs=91.0
Q ss_pred hhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH-hhCCchHHHHHHHHHHHhHhh
Q 012629 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT-KHSPQYKILMIGRILGGIATS 139 (459)
Q Consensus 62 ~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~-~~~~~~~~l~~~r~l~G~~~~ 139 (459)
.+.+.+|.++.+.+...+...+...++.++.|++.||+|+|+.+..+..+.+++. +. ...++.+...+..++.+.+..
T Consensus 225 ~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~ 304 (382)
T PRK10091 225 YMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLF 304 (382)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3445689999999988888777788888999999999999999998888777764 33 335555666666667777665
Q ss_pred hhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHH
Q 012629 140 LLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (459)
Q Consensus 140 ~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~ 213 (459)
...+........+. ++++..+.. .. .....+|..++|.+++.+.++. ++|+..+...+.+..+...
T Consensus 305 ~~~~~~~~~~~~~~-~~~~~~~~~-----~~-~~~~~~g~~~Gp~~~G~l~~~~-~~~~~~~~~~~~~~~~~~~ 370 (382)
T PRK10091 305 ALSAPLQILLLQNA-KGGELLGAA-----GG-QIAFNLGSAIGAYCGGMMLTLG-LAYNYVALPAALLSFAAMS 370 (382)
T ss_pred hhhHHHHHHHHHhC-CcchHHHHH-----HH-HHHHHHHHHHHHHHhHHHHHcc-cCcchHHHHHHHHHHHHHH
Confidence 55444333233332 222222211 01 1234467777777777776532 3456667666555554433
No 166
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.87 E-value=2.7e-08 Score=94.04 Aligned_cols=113 Identities=14% Similarity=0.043 Sum_probs=78.1
Q ss_pred hhccccCCCccCCc---hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 012629 269 LWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (459)
Q Consensus 269 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (459)
...|.|..+ .+.+ .+...+...++..++.++.|+++||+|||+ .+..+..+..+............ +.
T Consensus 20 ~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~~------~~ 90 (365)
T TIGR00900 20 VALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKK--VMIGADLIRAVLVAVLPFVALLG------GL 90 (365)
T ss_pred HHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhH--HHHHHHHHHHHHHHHHHHHHHcC------CC
Confidence 344555544 2332 267778888899999999999999999988 34444444444433333333110 00
Q ss_pred CccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+ .+..++...+.+++.+...+...+++.|..|+++|++..++.+.
T Consensus 91 ~----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (365)
T TIGR00900 91 N----IWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQA 135 (365)
T ss_pred c----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHH
Confidence 1 13566777888899998889999999999999999999887766
No 167
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.87 E-value=2e-07 Score=86.07 Aligned_cols=145 Identities=23% Similarity=0.255 Sum_probs=95.6
Q ss_pred hhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HH-hhCCchHHHHHHHHHHHhHhh
Q 012629 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-IT-KHSPQYKILMIGRILGGIATS 139 (459)
Q Consensus 62 ~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~-~~~~~~~~l~~~r~l~G~~~~ 139 (459)
.+.+..|.+.+.++++....-+.+.+++.+.|+++|| +.|+.+.....+.++.. .. ...++.+..++.-++.|+...
T Consensus 237 ~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~ 315 (394)
T COG2814 237 FLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFS 315 (394)
T ss_pred HHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhh
Confidence 4456789999999988777777778888999999999 99999988888777764 33 556666666777777777665
Q ss_pred hhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHh
Q 012629 140 LLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILS 217 (459)
Q Consensus 140 ~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~ 217 (459)
........ -+++. +.++...+ .+....++|..+|. .+++.+.++ +++....+..+++.+++..+...
T Consensus 316 ~~~~~~~~-~~a~~~p~~~~~a~s----l~~aa~nlgia~GA----~lGG~v~~~--~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 316 PALQGLQT-RLARLAPDAADLAGS----LNVAAFNLGIALGA----ALGGLVLDA--LGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred hhhhHHHH-HhcccCCCchHHHHH----HHHHHHHHHHHHHH----HHHHHHHHh--hchHHHHHHHHHHHHHHHHHHHH
Confidence 55444322 23332 23333333 33334444444444 555555554 56677788888888777766653
Q ss_pred h
Q 012629 218 S 218 (459)
Q Consensus 218 ~ 218 (459)
.
T Consensus 385 ~ 385 (394)
T COG2814 385 S 385 (394)
T ss_pred H
Confidence 3
No 168
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.87 E-value=2.3e-08 Score=95.51 Aligned_cols=130 Identities=13% Similarity=0.164 Sum_probs=88.2
Q ss_pred cchhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHH-HH--HHhh--CCchHHHHHH
Q 012629 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC--ITKH--SPQYKILMIG 130 (459)
Q Consensus 57 ~p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~-~~--l~~~--~~~~~~l~~~ 130 (459)
..++|.+. +++|.+..+.+.......+...++.++.|+++||+|||+.+.....+..+ +. +..+ .++.+.+...
T Consensus 239 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (394)
T TIGR00883 239 TTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFL 318 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 45556655 67889988888887777777888888999999999999987765544433 31 2222 3566677778
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC
Q 012629 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (459)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (459)
.++.|++.+...+...+ ++.|. ++|+...+. ....+..+|..++|.+++.+.++.+
T Consensus 319 ~~~~g~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~-------~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 319 VLGLALIGGMYTGPMGS-FLPELFPTEVRYTGASL-------AYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHHHhhhHHH-HHHHhCCccceeeEeee-------hhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 88899988888777755 77776 333443331 2233444566677777777776555
No 169
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.85 E-value=4.5e-08 Score=95.76 Aligned_cols=163 Identities=12% Similarity=0.155 Sum_probs=100.3
Q ss_pred hhHHH-HHHHHHHhhhhhhhhhhhhhccccCCCccCCchh---HHHHHHHHHHHHHHHHHHHHhhc-CCCCcchhHHHHH
Q 012629 246 DEKIA-LLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVF 320 (459)
Q Consensus 246 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~~~ 320 (459)
+|+-. ........-..+.|. ...+.+.|+++.+|.+.. .....+........+++|+++|| +|||+ .+..+.
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~-~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~--~~~~g~ 88 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYG-VQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKR--TIVLGA 88 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHH--HHHHHH
Confidence 34433 333344444444444 577788888877777653 34444555566666799999999 99998 356666
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh--hhhhhhhhhhh---
Q 012629 321 VVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNFFRIP--- 395 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~~~~~--- 395 (459)
.+..+......+.... . ..+.++..+.+++.+...|...+.+.|.+|++. |++++++....
T Consensus 89 ~~~~~g~~~~~~~~~~---~-----------~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni 154 (489)
T PRK10207 89 IVLAIGYFMTGMSLLK---P-----------DLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI 154 (489)
T ss_pred HHHHHHHHHHHHhccc---h-----------hHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH
Confidence 6655555444432211 0 134466778889999888999999999998874 46666655553
Q ss_pred ---hhHHHHHhhhccCcchhHHHHHHHHHHHHHHH
Q 012629 396 ---LNIFVCVVLYNVDAFPITVMFGMCSIFLLVAS 427 (459)
Q Consensus 396 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 427 (459)
.++.+++++.+. .++...|.++.+......
T Consensus 155 g~~~g~~l~g~l~~~--~gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 155 GSLISLSLAPVIADK--FGYSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHHHHHHHHHHHHHh--hChHHHHHHHHHHHHHHH
Confidence 333445555444 345666666544444333
No 170
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.84 E-value=1.2e-07 Score=89.83 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=78.1
Q ss_pred hhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhh-hccCCCCC
Q 012629 267 VFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTS-FLVAPSNV 342 (459)
Q Consensus 267 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 342 (459)
...+.|.+.++.+|.+. +...+...++..++.++.|+++||+|||+ .+..+..+..+......+.. ..
T Consensus 20 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~i~~~~~~~~~~~~------ 91 (366)
T TIGR00886 20 FSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRY--TTTLSLLLLAIPCLWAGLAVQSY------ 91 (366)
T ss_pred hHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHHHHHHHHHhhhH------
Confidence 46677765666677655 67777888999999999999999999987 35555555555544443333 22
Q ss_pred CCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhh
Q 012629 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (459)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (459)
+.+++..++.|++.+ ..+....++.|.+|+++|+++.++..
T Consensus 92 ---------~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~ 132 (366)
T TIGR00886 92 ---------SVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAA 132 (366)
T ss_pred ---------HHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHH
Confidence 345566677777744 45667889999999999999988765
No 171
>PRK10504 putative transporter; Provisional
Probab=98.84 E-value=8.7e-08 Score=94.09 Aligned_cols=157 Identities=13% Similarity=0.073 Sum_probs=99.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHH
Q 012629 248 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSS 324 (459)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~ 324 (459)
.++......++.....+ ....+.|.+.++ +|.+. +...+...++..++.++.|+++||+|||+. +..+..+..
T Consensus 11 ~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~--~~~~~~~~~ 86 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTT-IVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNI--FFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHhHH-HHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH--HHHHHHHHH
Confidence 44444444444333333 356678888765 56654 456667778888899999999999999872 444444433
Q ss_pred HHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhH
Q 012629 325 VSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNI 398 (459)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~ 398 (459)
+........... +..++..++.|++.+...|...+.+.|.+|+++|+++.|+.+.. .++
T Consensus 87 ~~~~~~~~~~~~---------------~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 151 (471)
T PRK10504 87 LGSLFCALSGTL---------------NELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGP 151 (471)
T ss_pred HHHHHHHHhCCH---------------HHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333332222111 35566788889999988899999999999999999998877652 333
Q ss_pred HHHHhhhccCcchhHHHHHHHHHHHHH
Q 012629 399 FVCVVLYNVDAFPITVMFGMCSIFLLV 425 (459)
Q Consensus 399 ~~~~~l~~~~~~~~~~~~~~~~~~~~~ 425 (459)
.+++.+.+. .++...+........+
T Consensus 152 ~~~g~l~~~--~gw~~~f~~~~~~~~l 176 (471)
T PRK10504 152 ALGGLLVEY--ASWHWIFLINIPVGII 176 (471)
T ss_pred HHHHHHHhh--ccHHHHHHHHHHHHHH
Confidence 444445444 3455555554443333
No 172
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.84 E-value=1.3e-07 Score=90.36 Aligned_cols=136 Identities=15% Similarity=0.227 Sum_probs=91.7
Q ss_pred hccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 012629 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (459)
Q Consensus 270 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (459)
..|.+.+ .++.+. +...+...++..+++++.|++.||+|||+ .+..+..+.++.........+.
T Consensus 42 ~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~--~~~~~~~~~~~~~~~~~~~~~~---------- 108 (394)
T PRK10213 42 LLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRY--VVILFAVLLTLSCLLVSFANSF---------- 108 (394)
T ss_pred hHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHH--HHHHHHHHHHHHHHHHHHHChH----------
Confidence 4455444 345544 66677788889999999999999999987 3555555555544443333222
Q ss_pred ccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHH
Q 012629 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCS 420 (459)
Q Consensus 347 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~ 420 (459)
+.+++.-.+.|++.+...+...+++.|.+|+++|+++.++.... .++.++..+.+. .++...+...+
T Consensus 109 -----~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~ 181 (394)
T PRK10213 109 -----SLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL--IGWRNVFNAAA 181 (394)
T ss_pred -----HHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCHHHHHHHHH
Confidence 36667778889999988899999999999999999998776652 333444444443 34555555544
Q ss_pred HHHHH
Q 012629 421 IFLLV 425 (459)
Q Consensus 421 ~~~~~ 425 (459)
+..++
T Consensus 182 ~l~~~ 186 (394)
T PRK10213 182 VMGVL 186 (394)
T ss_pred HHHHH
Confidence 43333
No 173
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.84 E-value=4.3e-08 Score=95.47 Aligned_cols=150 Identities=11% Similarity=-0.003 Sum_probs=98.2
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhccc--CcchhhHHH--HHHHHHHH-HHhhCCchHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRACVTY--CLTYILSC-ITKHSPQYKILMIGR 131 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~--Grr~~~~~~--~~~~~~~~-l~~~~~~~~~l~~~r 131 (459)
..++|.+.+++|.+..+.+.+.+...+...++.++.|+++||. ++|+...++ .+..+++. +....++++.+++.+
T Consensus 261 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~ 340 (455)
T TIGR00892 261 IIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYC 340 (455)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 3345566678899999999888887777778888999999984 344434333 23333333 446678889899999
Q ss_pred HHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHH
Q 012629 132 ILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (459)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~ 211 (459)
++.|++.+...+...+ ++.|..++..... ..+ .......+|..++|.+++.+.+..+ +|+..|++.+++.++.
T Consensus 341 ~~~G~~~g~~~~~~~~-~~~~~~~~~~~g~----~~g-~~~~~~~lg~~igp~i~G~l~~~~g-~~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 341 IFFGLSFGSVGALLFE-VLMDLVGAQRFSS----AVG-LVTIVECCAVLIGPPLAGRLVDATK-NYKYIFYASGSIVVSA 413 (455)
T ss_pred HHHHHHhchHHHHHHH-HHHHHhhHHHHhh----HHh-HHHHHHHHHHHccccceeeeehhcC-CcchHHHHhhHHHHHH
Confidence 9999999888777655 6666522222221 122 2233445777788888888776543 3566677766665554
Q ss_pred HH
Q 012629 212 MV 213 (459)
Q Consensus 212 ~~ 213 (459)
.+
T Consensus 414 ~~ 415 (455)
T TIGR00892 414 GL 415 (455)
T ss_pred HH
Confidence 43
No 174
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.83 E-value=8.9e-08 Score=94.26 Aligned_cols=160 Identities=15% Similarity=0.095 Sum_probs=93.2
Q ss_pred hhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhh--C-CchH-HHHHHHHH
Q 012629 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH--S-PQYK-ILMIGRIL 133 (459)
Q Consensus 59 ~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~--~-~~~~-~l~~~r~l 133 (459)
+.|.+.++.|.+....+.......+...++.++.|+++||+|||+.++.+..+.+++. +.+. . +..+ ......++
T Consensus 293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 372 (479)
T PRK10077 293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLF 372 (479)
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 4467778888887666555444555566777889999999999999999988887764 3322 1 2222 22233344
Q ss_pred HHhHhhhhh-hhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhh--hhcccccCCccccchhhHHHH
Q 012629 134 GGIATSLLF-SAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG--NLLVDSFSLGPVAPFDAAACF 207 (459)
Q Consensus 134 ~G~~~~~~~-~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~--~~l~~~~~~~w~~~f~~~~~~ 207 (459)
.+.+.+... +.... ++.|. ++|+...+. ......++..+++.+.|.+. +++.+ .++|+..|++.+++
T Consensus 373 ~~~~~~~~~~~~~~~-~~~e~~p~~~r~~~~g~----~~~~~~~g~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~ 445 (479)
T PRK10077 373 YVAAFAMSWGPVCWV-LLSEIFPNAIRGKALAI----AVAAQWIANYFVSWTFPMMDKNSWLVA--HFHNGFSYWIYGCM 445 (479)
T ss_pred HHHHHhccccchhHH-HhHhhCChhHHHHHHHH----HHHHHHHHHHHHHHHhHHHHhccchhh--hccCccHHHHHHHH
Confidence 444444322 33333 67776 334444442 22233444555555555554 33333 34556677777766
Q ss_pred HHHHHHHHHhhccccCCC
Q 012629 208 LAIGMVIILSSWTENYGD 225 (459)
Q Consensus 208 ~~i~~~~~~~~~~~~~~~ 225 (459)
.++..++.+...||++++
T Consensus 446 ~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 446 GVLAALFMWKFVPETKGK 463 (479)
T ss_pred HHHHHHHHHhccccCCCC
Confidence 666666665566776543
No 175
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.83 E-value=4.7e-08 Score=93.39 Aligned_cols=102 Identities=19% Similarity=0.316 Sum_probs=76.5
Q ss_pred CCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccch
Q 012629 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGS 352 (459)
Q Consensus 276 ~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (459)
++.++.+. +...+...++..++.++.|++.||+|||+. +..+..+..+.........+. +
T Consensus 21 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~--~~~~~~~~~~~~~~~~~~~~~---------------~ 83 (399)
T TIGR00893 21 QEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKT--LAVFIVIWGVFTGLQAFAGAY---------------V 83 (399)
T ss_pred HHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCccee--eHHHHHHHHHHHHHHHHHcCH---------------H
Confidence 33445433 778888889999999999999999999883 444444444444443333222 3
Q ss_pred hHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 353 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.+.+..++.|++.+...+....++.|.+|+++|+++.++.+.
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 125 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNS 125 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 667778889999998899999999999999999999887766
No 176
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.82 E-value=3.1e-07 Score=84.70 Aligned_cols=148 Identities=21% Similarity=0.255 Sum_probs=92.3
Q ss_pred HHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhc----ccCcchhhHHHHHHHH-HHH-HHhhCC
Q 012629 49 MMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACVTYCLTYI-LSC-ITKHSP 122 (459)
Q Consensus 49 ~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~D----r~Grr~~~~~~~~~~~-~~~-l~~~~~ 122 (459)
..++...+..++++...+.|++..-.+.+-..+-+.+.+.+|+.|..+| ||||||.++....+.. ++. +..++.
T Consensus 44 vqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aa 123 (498)
T KOG0637|consen 44 VQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAA 123 (498)
T ss_pred HHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHh
Confidence 3445556677777888899999888887777788889999999999999 5899998877765554 354 445554
Q ss_pred chH-----------------HHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccccc-chhhHHHHHHHHHHHHHHHHHHH
Q 012629 123 QYK-----------------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGF-EQQWLSITFSKAIFLGNGLVAIL 181 (459)
Q Consensus 123 ~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~-~~~~~~~~~~~~~~~g~~~g~~~ 181 (459)
++. .+++.--+.-++.......+.+ ++.|. +++.+ ..+ .++....+|+.+|..+
T Consensus 124 Dig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra-~L~Dl~~~d~~~~~Ans----~f~~f~avGnvLGY~~ 198 (498)
T KOG0637|consen 124 DIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRA-LLADLARGDAKKTRANS----VFSFFMAVGNVLGYAL 198 (498)
T ss_pred hhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHH-HHHHhccChhhhhccch----hHHHHHHhcceeeeec
Confidence 433 2233333444455566666656 77776 22222 444 4454555555555554
Q ss_pred hhhhhhhcccccCCccccchhhHHHHHH
Q 012629 182 SGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (459)
Q Consensus 182 ~~~l~~~l~~~~~~~w~~~f~~~~~~~~ 209 (459)
++ +.+|.-..+|.....+.+
T Consensus 199 g~--------y~~~~~~~~Ft~~~~~~~ 218 (498)
T KOG0637|consen 199 GS--------YLGLYKIFPFTLTTACDL 218 (498)
T ss_pred cc--------ccCceEEeehHHHHHHHH
Confidence 44 234444455655444433
No 177
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.81 E-value=3.4e-07 Score=87.85 Aligned_cols=147 Identities=17% Similarity=0.207 Sum_probs=94.3
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhH-HHHHHHHHHH-HHh-----hCCchHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV-TYCLTYILSC-ITK-----HSPQYKILMI 129 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~-~~~~~~~~~~-l~~-----~~~~~~~l~~ 129 (459)
..+.|...+++|.+..+.+.+.......+.++.+..|+++||+|||+.+. .+.+..+++. ... ..++.+.+++
T Consensus 242 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (402)
T TIGR00897 242 AVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALI 321 (402)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHH
Confidence 44556667889999988887777777777888889999999999988764 3333333321 111 2346677778
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhccc--cccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHH
Q 012629 130 GRILGGIATSLLFSAFESWLVAEHNK--RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (459)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~~~--r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~ 207 (459)
..++.|++.+...+.. . .+.|..+ |+...+ .......+|..++|.+.+.+.+.. +|+..+++.+++
T Consensus 322 ~~~~~G~~~~~~~~~~-~-~~~~~~~~~~g~~~g--------~~~~~~~lg~~~gp~i~g~l~~~~--g~~~~~~~~a~~ 389 (402)
T TIGR00897 322 IAIALGIFLAGYVPLA-A-VFPTLAPKHKGAAMS--------VLNLSAGLSAFLAPAIAVLFIGFF--GAIGVVWIFAAL 389 (402)
T ss_pred HHHHHHHHHHHHHHHH-H-HHHhhCcchhHHHHH--------HHHHHHHHHHHHHHHHHHHHHhhc--chHHHHHHHHHH
Confidence 8888998888765532 4 5555533 333222 223344566667777777777644 566777777766
Q ss_pred HHHHHHHH
Q 012629 208 LAIGMVII 215 (459)
Q Consensus 208 ~~i~~~~~ 215 (459)
.++.....
T Consensus 390 ~~i~~~~~ 397 (402)
T TIGR00897 390 YVVSAFLT 397 (402)
T ss_pred HHHHHHHH
Confidence 66554444
No 178
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.81 E-value=1.1e-07 Score=92.11 Aligned_cols=102 Identities=15% Similarity=0.100 Sum_probs=76.7
Q ss_pred CccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchh
Q 012629 277 NDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (459)
Q Consensus 277 ~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (459)
+.++.+. +...+...++..++.++.|+++||+|||+ .+..+.....+......+..+. +.
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~--~l~~~~~~~~~~~~~~~~~~~~---------------~~ 108 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKP--LMMWSIVAYSVGTGLSGLASGV---------------IM 108 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHhHH---------------HH
Confidence 4455543 66777888999999999999999999987 3555555555554444333332 35
Q ss_pred HHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 354 ~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
+.+.-.+.|++.+...+....++.|.+|+++|+++.++....
T Consensus 109 l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 150 (426)
T PRK12307 109 LTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSG 150 (426)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHH
Confidence 667778889998888899999999999999999998887663
No 179
>TIGR00895 2A0115 benzoate transport.
Probab=98.81 E-value=4.2e-08 Score=93.91 Aligned_cols=111 Identities=19% Similarity=0.240 Sum_probs=78.5
Q ss_pred hhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 012629 267 VFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (459)
Q Consensus 267 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (459)
.....|.+.+ .++.+. +...+...++.+++.++.|+++||+|||+ .+..+..+..+...........
T Consensus 36 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--~~~~~~~~~~~~~~~~~~~~~~------- 105 (398)
T TIGR00895 36 MGFAAPAISA-EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKR--VLLWSILLFSVFTLLCALATNV------- 105 (398)
T ss_pred HHhhHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH--HHHHHHHHHHHHHHHHHHccch-------
Confidence 3445555544 345543 66777778889999999999999999887 3444444444443333222211
Q ss_pred CCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
+..++..++.|++.+...+...+++.|.+|++.|+++.++.+..
T Consensus 106 --------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 149 (398)
T TIGR00895 106 --------TQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCG 149 (398)
T ss_pred --------HHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhH
Confidence 35566778888999988999999999999999999998877663
No 180
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.80 E-value=4.7e-08 Score=92.89 Aligned_cols=108 Identities=19% Similarity=0.341 Sum_probs=78.9
Q ss_pred hhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 012629 269 LWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (459)
Q Consensus 269 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (459)
...|.+. +.++.+. +...+...++..++.++.|+++||+|||+ .+..+..+..+...+.......
T Consensus 16 ~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~--------- 83 (379)
T TIGR00881 16 LAMPYLV-EEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRV--FLPIGLILCAIVNLFFGFSTSL--------- 83 (379)
T ss_pred hhhHHHH-HHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCee--hhHHHHHHHHHHHHHHHHhhhH---------
Confidence 3444433 3344433 67778888999999999999999999998 3555555555544444333322
Q ss_pred CccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+..++..++.|++.+...+...+++.|.+|+++|+++.++.+.
T Consensus 84 ------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 126 (379)
T TIGR00881 84 ------WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNC 126 (379)
T ss_pred ------HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhc
Confidence 3566777888899898889999999999999999998877665
No 181
>PRK15075 citrate-proton symporter; Provisional
Probab=98.80 E-value=2e-07 Score=90.46 Aligned_cols=137 Identities=13% Similarity=0.122 Sum_probs=81.7
Q ss_pred cchhhhhhh-ccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHH-HH-HH---hhCCchHHHHHH
Q 012629 57 GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SC-IT---KHSPQYKILMIG 130 (459)
Q Consensus 57 ~p~l~~~~~-~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~-~~-l~---~~~~~~~~l~~~ 130 (459)
..+.|.+.+ .+|.+..+.++......+.+.++.+++|+++||+|||+.+..+..+..+ .. .. ...+++..+...
T Consensus 258 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (434)
T PRK15075 258 TVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAV 337 (434)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 445566655 4799988888776666666777788999999999999998876544332 21 11 123344444455
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccc
Q 012629 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (459)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~ 198 (459)
.++.|++.+...+.... ++.|.-+++.+.. ..+.....+..++..++|.+.+++.++.+++|.
T Consensus 338 ~~~~~~~~g~~~~~~~~-~~~e~~p~~~rg~----~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~ 400 (434)
T PRK15075 338 ELWLSFLYGSYNGAMVV-ALTEVMPAEVRTA----GFSLAYSLATAIFGGFTPAISTWLIHVTGDKAA 400 (434)
T ss_pred HHHHHHHHHHHHhhHHH-HHHHHCCCCccch----heeHHHHHHHHHHhhhHHHHHHHHHHhcCCchH
Confidence 55666666665555434 6666622222222 122223334444455667777777776665543
No 182
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.79 E-value=5.5e-07 Score=86.16 Aligned_cols=81 Identities=17% Similarity=0.158 Sum_probs=57.7
Q ss_pred hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhh
Q 012629 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLF 142 (459)
Q Consensus 64 ~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (459)
.+++|.++.+.+.+.........++.++.|++.||+|||+.+..+..+..++. ...+.++.+..+..-.+.+.+.+...
T Consensus 231 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 310 (392)
T PRK10473 231 MEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGF 310 (392)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46789998888887777777777888899999999999999999988877765 44554554444444444444444443
Q ss_pred hh
Q 012629 143 SA 144 (459)
Q Consensus 143 ~~ 144 (459)
+.
T Consensus 311 ~~ 312 (392)
T PRK10473 311 GV 312 (392)
T ss_pred HH
Confidence 33
No 183
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.78 E-value=2.7e-07 Score=90.65 Aligned_cols=147 Identities=15% Similarity=0.206 Sum_probs=88.4
Q ss_pred hhhhccCCCccchhhHH-HHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH----HHhhC-CchHHHHHHHHHHH
Q 012629 62 YLYSTYGFGKGEIGQLF-IAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHS-PQYKILMIGRILGG 135 (459)
Q Consensus 62 ~~~~~~~~s~~~~g~~~-~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~----l~~~~-~~~~~l~~~r~l~G 135 (459)
.+.+++|.+.++++... ....+...++.++.|+++||+|+|+.+.++.++.+++. +.+.. ++.+.+...-+++.
T Consensus 248 ~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~ 327 (491)
T PRK11010 248 FLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFEN 327 (491)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 33467899999999886 45556677778899999999999998777665544432 12333 35545555556655
Q ss_pred hHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~ 215 (459)
++.+...+...+ +..+..++...... ++. .+....+|..+++.+.+.+.+.. +|+..|.+.+++.+++.+..
T Consensus 328 ~~~g~~~~~~~a-~~~~l~~~~~~~t~----~gl-~~s~~~lg~~~~~~~~G~l~~~~--G~~~~f~~~~~~~l~~l~~~ 399 (491)
T PRK11010 328 LCGGMGTAAFVA-LLMTLCNKSFSATQ----FAL-LSALSAVGRVYVGPVAGWFVEAH--GWPTFYLFSVAAAVPGLLLL 399 (491)
T ss_pred HHHHHHHHHHHH-HHHHHcCCCCcHHH----HHH-HHHHHHHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHH
Confidence 544544444433 55554333333321 221 22223466666666777777654 46677777777776665555
Q ss_pred H
Q 012629 216 L 216 (459)
Q Consensus 216 ~ 216 (459)
.
T Consensus 400 ~ 400 (491)
T PRK11010 400 L 400 (491)
T ss_pred H
Confidence 4
No 184
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.78 E-value=5.9e-07 Score=86.37 Aligned_cols=122 Identities=13% Similarity=0.059 Sum_probs=79.3
Q ss_pred hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhh-----CCchHHHHHHHHHHHhH
Q 012629 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH-----SPQYKILMIGRILGGIA 137 (459)
Q Consensus 64 ~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~-----~~~~~~l~~~r~l~G~~ 137 (459)
.+++|.++.+.+...........++.++.|+++||+|+|+.+..+.++..++. +... .++.+.+++..++.|++
T Consensus 243 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g 322 (406)
T PRK15402 243 ISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG 322 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 46789998888877666555566777889999999999999988887776654 3232 23566677888899999
Q ss_pred hhhhhhhhhhhhhh--hccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC
Q 012629 138 TSLLFSAFESWLVA--EHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (459)
Q Consensus 138 ~~~~~~~~~~~~i~--~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (459)
.+...+.... ... +.+++++..+ ..+.... ++..+++.+.+.+.+..+
T Consensus 323 ~~~~~~~~~~-~~~~~~~~~~g~~~~----~~~~~~~----~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 323 IGLANAGLYR-LTLFSSDVSKGTVSA----AMGMLSM----LIFTVGIELSKHAYLGGG 372 (406)
T ss_pred HHHHhhhHHH-HHhhhccccccHHHH----HHHHHHH----HHHHHHHHHHHhcccCCc
Confidence 8887665533 322 2244555444 3333333 344455566666554444
No 185
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.78 E-value=1.5e-07 Score=86.17 Aligned_cols=164 Identities=13% Similarity=0.168 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHhhhhc-cchhhhh-hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-
Q 012629 40 NNYLLVYSLMMAGDWLQ-GPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC- 116 (459)
Q Consensus 40 ~~~~~~~~~~~~~~~~~-~p~l~~~-~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~- 116 (459)
|.+.+. ....++..+. ...+|.+ .++|+.++.+.|...+..-..+.+..+.+|+++||+|.+|+.......++++.
T Consensus 221 W~lsll-Y~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~ 299 (417)
T COG2223 221 WLLSLL-YFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAA 299 (417)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHH
Confidence 443333 3344433333 3444444 47899999999988888888899999999999999999999999888887754
Q ss_pred HHhhC-------CchH----HHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q 012629 117 ITKHS-------PQYK----ILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (459)
Q Consensus 117 l~~~~-------~~~~----~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (459)
+.+.. ++.. .++...+..|+|.|..+-.... +-.+ +-+. ..+.... ...+|...-|..
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~-if~~--~~G~-------v~G~vga-~G~lGGf~lp~~ 368 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPV-IFPK--ETGA-------VTGIVGA-IGGLGGFFLPLA 368 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechH-HHHh--hhhH-------HHHHHHH-hccccccchhHH
Confidence 33332 2333 3455666777777766544322 2111 1111 2222222 233554555555
Q ss_pred hhhcccccCCccccchhhHHHHHHHHHHHHH
Q 012629 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 186 ~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
-+...+..+ .+...|++...+.+++.++.+
T Consensus 369 ~g~~~~~tg-~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 369 FGVSLDLTG-SYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHhcc-cHHHHHHHHHHHHHHHHHHHH
Confidence 555555555 567778877777777666555
No 186
>PRK11043 putative transporter; Provisional
Probab=98.77 E-value=1.6e-07 Score=90.07 Aligned_cols=140 Identities=14% Similarity=0.054 Sum_probs=85.6
Q ss_pred hhhcccc--CCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 012629 268 FLWTPAL--SPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (459)
Q Consensus 268 ~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (459)
..+.|.+ .++.++.+. +...+...++..++.++.|+++||+|||+ .+..+..+..+...........
T Consensus 23 ~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~------ 94 (401)
T PRK11043 23 DMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKP--VLLAGLSLFALGSLGMLWVESA------ 94 (401)
T ss_pred HHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcH--HHHHHHHHHHHHHHHHHHhcCH------
Confidence 4455554 334455544 67777788889999999999999999988 3444444444333333222211
Q ss_pred CCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh------hhhHHHHHhhhccCcchhHHHH
Q 012629 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI------PLNIFVCVVLYNVDAFPITVMF 416 (459)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~------~~~~~~~~~l~~~~~~~~~~~~ 416 (459)
+.+++...+.|++.+...+...+...|.+|++.+++..+..+. ..++.+++.+.+. .++...+
T Consensus 95 ---------~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~--~g~~~~~ 163 (401)
T PRK11043 95 ---------AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH--FGWQAIF 163 (401)
T ss_pred ---------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CChHHHH
Confidence 2455566777777776677778889999999888777665443 1334445555444 3444445
Q ss_pred HHHHHHHHHH
Q 012629 417 GMCSIFLLVA 426 (459)
Q Consensus 417 ~~~~~~~~~~ 426 (459)
....+..++.
T Consensus 164 ~~~~~~~~~~ 173 (401)
T PRK11043 164 ATLFAITLLL 173 (401)
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 187
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.75 E-value=7.2e-09 Score=95.51 Aligned_cols=96 Identities=15% Similarity=0.244 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
|++.....+..++.+++.|++.||++|++ ++..+..+-.++.+...+..+. |.+.+.-.+.|+
T Consensus 71 Gll~~vf~v~~~i~sPl~gyLadryNR~~--v~~vG~~iW~~Av~~~~fs~~F---------------wq~~l~R~~vGi 133 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYLADRYNRKR--VIAVGIFIWTLAVFASGFSNHF---------------WQVLLCRGFVGI 133 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcce--EEeeHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHhcc
Confidence 78889999999999999999999999988 4666666666666666665544 577888899999
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhhhh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (459)
|.+...|...++++|.+|+++|++++++.+++.
T Consensus 134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~i 166 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAI 166 (493)
T ss_pred chhhhcccchhHhhhcCcchhhhHHHHHhhhhc
Confidence 999999999999999999999999999999853
No 188
>PRK09848 glucuronide transporter; Provisional
Probab=98.74 E-value=2.8e-07 Score=89.85 Aligned_cols=119 Identities=8% Similarity=0.020 Sum_probs=75.1
Q ss_pred hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhC--CchHHHHHHHHHHHhHhhhh
Q 012629 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS--PQYKILMIGRILGGIATSLL 141 (459)
Q Consensus 65 ~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~--~~~~~l~~~r~l~G~~~~~~ 141 (459)
+.+|.+....+...........++.++++++.||+|+|+++..+.++..++. +..+. ++++.+++..++.|+|.+..
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~ 336 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT 336 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 4466554433333333344455677789999999999999999988887765 33443 35667777788899999998
Q ss_pred hhhhhhhhhhhccc-----c-ccchhhHHHHHHHHHHHHHHHHHHHhhh
Q 012629 142 FSAFESWLVAEHNK-----R-GFEQQWLSITFSKAIFLGNGLVAILSGL 184 (459)
Q Consensus 142 ~~~~~~~~i~~~~~-----r-~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 184 (459)
.+...+ +..|..+ + .+..+.....++....+|..+|+.+.+.
T Consensus 337 ~~~~~a-l~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 337 MTVMWA-LEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHH-HHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887755 6555411 1 1233444445555555555555554443
No 189
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.74 E-value=4.7e-07 Score=85.36 Aligned_cols=131 Identities=14% Similarity=0.101 Sum_probs=83.1
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhccc-CcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (459)
..++|.+.++.|.+..+.+.+.+...+...+++++.|++.||+ +||+.+..+..+.+++. ...+.++..... .-++.
T Consensus 217 ~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 295 (355)
T TIGR00896 217 IGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVL 295 (355)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHH
Confidence 4456677778899999999888888888888889999999999 56667777777776664 345544433322 45678
Q ss_pred HhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccC
Q 012629 135 GIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (459)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~ 194 (459)
|++.+...+...+ .+.+. .+++.... ..+.....+ .++..++|.+.+.+.++.+
T Consensus 296 g~~~g~~~~~~~~-~~~~~~~~~~~~g~----~~~~~~~~~-~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 296 GLGQGGAFPLALT-LIGLRSRQAAQAAA----LSAMAQSIG-YLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHhhhhHhHHHHH-HHHHhccCHHHHHH----HHHHHHHHH-HHHHHHHHHHHHHHHHHhc
Confidence 9999888887655 44332 22222222 112122222 2445566677777665543
No 190
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.74 E-value=2.4e-07 Score=86.55 Aligned_cols=149 Identities=12% Similarity=0.102 Sum_probs=107.5
Q ss_pred CCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhh
Q 012629 68 GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFE 146 (459)
Q Consensus 68 ~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (459)
+.++..+|.+.+.+-..-.+.-.+..++.+|+|.|+.++++..+..+=. .+++++|.+.+.+.+.+.|+-.+.......
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556777777666566666678999999999999999999888865 779999999999999999999999988887
Q ss_pred hhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccC
Q 012629 147 SWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENY 223 (459)
Q Consensus 147 ~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 223 (459)
. |+++..+++.. ...+..+..++.++|..+.+.++|.+.++. |.+..|++.+.+.+...++..+.+++++
T Consensus 335 k-YI~~~fd~rls----At~y~v~~~~~~~~~~~i~s~~~G~lyd~~--G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 335 K-YITAHFDKRLS----ATLYLVGFQFAKQIGIIILSPLAGYLYDRI--GFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp H-HHHHHS-GGGH----HHHHHHHHTTTHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred H-HHHHhCCHhHH----HHHHHHHHHHHHHHHHHHHhhhHHhhHhhc--CcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 7 88876433332 224555566677888888888999888765 4456787777777666666665665443
No 191
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.74 E-value=1.9e-07 Score=91.88 Aligned_cols=163 Identities=11% Similarity=0.129 Sum_probs=95.8
Q ss_pred cchhH-HHHHHHHHHhhhhhhhhhhhhhccccCCCccCCchh---HHHHHHHHHHHHHHHHHHHHhhc-CCCCcchhHHH
Q 012629 244 ASDEK-IALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQI 318 (459)
Q Consensus 244 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~ 318 (459)
+++|+ ++.......+.....+. ...+.+.|+++.+|.+.. ..............+++|+++|| +|||+ .+..
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~-~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~--~~~~ 93 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYG-LQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKR--VIML 93 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH--HHHH
Confidence 35555 44444444444455444 677899998877887653 33333333334445689999999 59987 3555
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh--hhhhhhhhhhh-
Q 012629 319 VFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNFFRIP- 395 (459)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~~~~~- 395 (459)
+..+..++.....+.... .+...++..+.+++.+...+...++..|.+|++. |..+.++.+..
T Consensus 94 g~~~~~ig~~l~~~~~~~--------------~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~ 159 (500)
T PRK09584 94 GAIVLAIGYALVAWSGHD--------------AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSI 159 (500)
T ss_pred HHHHHHHHHHHHHHhccc--------------HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHH
Confidence 555555444433322111 0234556677888888888888899999998653 34455544432
Q ss_pred -----hhHHHHHhhhccCcchhHHHHHHHHHHHHH
Q 012629 396 -----LNIFVCVVLYNVDAFPITVMFGMCSIFLLV 425 (459)
Q Consensus 396 -----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 425 (459)
.++.+++.+.+. .++...|...++...+
T Consensus 160 ~iG~~~gp~i~g~l~~~--~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 160 NIGSFFSMLATPWLAAK--YGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHH
Confidence 344555555444 3566666665544333
No 192
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.73 E-value=3.5e-07 Score=87.96 Aligned_cols=131 Identities=11% Similarity=0.055 Sum_probs=84.0
Q ss_pred ccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhH
Q 012629 278 DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (459)
Q Consensus 278 ~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (459)
.++.+. +...+.+.++..++.++.|+++||+|||+ ++..+..+..++.......... +.+
T Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~~~~~~~~~~~~~~~~a~~~---------------~~l 107 (413)
T PRK15403 45 DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRP--VLITGALIFTLACAATLFTTSM---------------TQF 107 (413)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchH--HHHHHHHHHHHHHHHHHHcCCH---------------HHH
Confidence 345444 45667777889999999999999999998 3444544444444333332221 355
Q ss_pred HHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHHHHH
Q 012629 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVAS 427 (459)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 427 (459)
+++-++.|++.+...+..+.+..|.+|++++++.+++.+.. .++.+++.+.+. .++...+...++..++..
T Consensus 108 ~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~--~gw~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 108 LIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF--VHWKVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHH
Confidence 66677778877766677778899999999988887765542 344555555443 355556655555444433
No 193
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.72 E-value=3.5e-07 Score=90.24 Aligned_cols=139 Identities=13% Similarity=0.068 Sum_probs=91.5
Q ss_pred hhhhccccCCCccCCc---hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 012629 267 VFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (459)
Q Consensus 267 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (459)
+..-.|.+.++ +|.+ .++..+.+.++...+.+..|+++||+|||+ .+..+..+..+.........+.
T Consensus 25 v~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~--~l~~~~~~~~~~~~~~~~a~~~------- 94 (495)
T PRK14995 25 LHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKR--LLMLGGTLFGLASLAAAFSPTA------- 94 (495)
T ss_pred HHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHcCCH-------
Confidence 45557777554 4443 267777788888888999999999999998 3555555555555444433222
Q ss_pred CCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccC-Chhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHH
Q 012629 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYI-PEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMF 416 (459)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~ 416 (459)
+.++++-.+.|++.+...|.....+.+.+ |+++|+++.|+.... .++.+++.+.+. .++.+.+
T Consensus 95 --------~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~--~gwr~~f 164 (495)
T PRK14995 95 --------SWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH--FYWGSVF 164 (495)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--CChHHHH
Confidence 35667778889988888887777776654 778899998876663 444555666554 3455555
Q ss_pred HHHHHHHHH
Q 012629 417 GMCSIFLLV 425 (459)
Q Consensus 417 ~~~~~~~~~ 425 (459)
.......++
T Consensus 165 ~i~~~~~~~ 173 (495)
T PRK14995 165 LINVPIVLV 173 (495)
T ss_pred HHHHHHHHH
Confidence 554433333
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=98.72 E-value=2.7e-07 Score=89.75 Aligned_cols=109 Identities=16% Similarity=0.119 Sum_probs=69.5
Q ss_pred hHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHH-HHH-hh-CCchHHHHHHHHHHHhHhhhhhhhhhhhhhhh
Q 012629 76 QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-CIT-KH-SPQYKILMIGRILGGIATSLLFSAFESWLVAE 152 (459)
Q Consensus 76 ~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~-~l~-~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~ 152 (459)
.+.....+...++.+++++++||+|+|+.+..+....++. ... .. .++.+.+++..++.|++.+...+...+ +++|
T Consensus 268 ~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a-m~ad 346 (444)
T PRK09669 268 LFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS-MFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHHh
Confidence 4444444555566678999999999999999887766543 322 22 456777788889999999998887766 6655
Q ss_pred c---cc--cc-cchhhHHHHHHHHHHHHHHHHHHHhhhh
Q 012629 153 H---NK--RG-FEQQWLSITFSKAIFLGNGLVAILSGLF 185 (459)
Q Consensus 153 ~---~~--r~-~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (459)
. ++ .| +..+......+....+|..+|+.+++.+
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 11 12 3334444444444555555555544433
No 195
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.71 E-value=1.2e-06 Score=83.85 Aligned_cols=147 Identities=13% Similarity=-0.030 Sum_probs=91.4
Q ss_pred hhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhh
Q 012629 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLL 141 (459)
Q Consensus 63 ~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~ 141 (459)
..+.+|.++.+.|.+.....+...++++..+++.||.++|+.+..+... ++.. ...+.++++...+..++.|++.+..
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~ 310 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFF 310 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhh
Confidence 3466899999999888887777778888999999999999988877533 3333 4456677777777888899998887
Q ss_pred hhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHH
Q 012629 142 FSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 142 ~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
.+...+ .+.+..++....+......+....++..++..+. +.+ +..+-+++..|...+.+........+
T Consensus 311 ~~~~~~-~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 311 VVPMNA-LLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY----SLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhhHHH-HHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH----HHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 776655 5555422222122222233344444444444443 322 23455666555555555444444443
No 196
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.71 E-value=1e-06 Score=84.52 Aligned_cols=143 Identities=15% Similarity=0.252 Sum_probs=84.7
Q ss_pred hhhhccCCCccchhhHHHH-HHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH----HHhhC-CchHHHHHHHHH--
Q 012629 62 YLYSTYGFGKGEIGQLFIA-GFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHS-PQYKILMIGRIL-- 133 (459)
Q Consensus 62 ~~~~~~~~s~~~~g~~~~~-~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~----l~~~~-~~~~~l~~~r~l-- 133 (459)
.+.+++|.++++++.+... +.....++.++.|++.||+|||+.+..+..+..+.. ..++. ++.+.+.+.-++
T Consensus 235 ~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 314 (402)
T PRK11902 235 FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIEN 314 (402)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 4556789999999987654 334456667789999999999998877766655432 12344 455655555443
Q ss_pred --HHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHH
Q 012629 134 --GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (459)
Q Consensus 134 --~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~ 211 (459)
.|++.+...+.... ++.+..+ +...+ ..+.. ..++...++.+++.+.++. +|+..|...+.+.++.
T Consensus 315 ~~~g~~~~~~~~~~~~-~~~~~~~-~~~~~----~~~~~----~~l~~~~~~~~~G~l~~~~--G~~~~f~~~~~~~~~~ 382 (402)
T PRK11902 315 LCGGMGTAAFVALLMA-LCNRSFS-ATQYA----LLSAL----ASVGRVYVGPTSGYLVEAY--GWPGFYLMTVVIALPG 382 (402)
T ss_pred HHHHHHHHHHHHHHHH-hcCCCCc-HHHHH----HHHHH----HHHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHH
Confidence 44445555555433 4554321 11111 12211 2344444455677777654 5567788877777776
Q ss_pred HHHHH
Q 012629 212 MVIIL 216 (459)
Q Consensus 212 ~~~~~ 216 (459)
.++.+
T Consensus 383 ~~~~~ 387 (402)
T PRK11902 383 LALLW 387 (402)
T ss_pred HHHHH
Confidence 65554
No 197
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.71 E-value=6.2e-07 Score=85.76 Aligned_cols=111 Identities=10% Similarity=-0.047 Sum_probs=74.4
Q ss_pred hccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 012629 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (459)
Q Consensus 270 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (459)
..+.+.++.++.+. +...++..+...+.++..|++.||+|.|+ ++..+..+..+......+..... .++
T Consensus 56 l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~--v~~~~~ll~~i~~~~~~~a~~~~------~~s 127 (462)
T PRK15034 56 VTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRR--WTVFSTAILIIPCVWLGIAVQNP------NTP 127 (462)
T ss_pred HHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHHccc------CCC
Confidence 34444444577765 56667777888888999999999999997 24444444444443333221100 011
Q ss_pred ccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhh
Q 012629 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (459)
Q Consensus 347 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (459)
.+.+++..++.|++ +..++.....+++.+|+++||++.|+..
T Consensus 128 ----~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~ 169 (462)
T PRK15034 128 ----FGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGING 169 (462)
T ss_pred ----HHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHH
Confidence 13566667777876 6677889999999999999999998874
No 198
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.70 E-value=9.8e-07 Score=86.42 Aligned_cols=146 Identities=21% Similarity=0.254 Sum_probs=101.9
Q ss_pred chhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHH
Q 012629 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGG 135 (459)
Q Consensus 58 p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G 135 (459)
..+|.+. +++|.++...|.+.+...+++.+++...+++.+|+++++.+..+.+..+++. ..+++++.+..++.-++.|
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G 318 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAG 318 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 3455555 5789999999999888877777888889999999999999999988888876 5689999999999999999
Q ss_pred hHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHH
Q 012629 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~ 212 (459)
++.........+ .+.+. +.||+..+ .+......+..+|..+.+.++.. . +.+..+.+.++..++..
T Consensus 319 ~~~~~~~~~~~t-~~Q~~~P~~~~GRv~s----i~~~~~~g~~~lGsll~G~la~~----~--g~~~al~~a~~~lll~~ 387 (524)
T PF05977_consen 319 AAWIIANSSLNT-LVQLSVPDWVRGRVFS----IYQMVFFGGMPLGSLLWGFLADH----F--GVRTALLIAGAALLLSA 387 (524)
T ss_pred HHHHHHHHHHHH-HHHHhCCHHHHhHHHH----HHHHHHHHHHHHHHHHHHHHHHH----h--CHHHHHHHHHHHHHHHH
Confidence 998888776655 54444 44555555 33434444555555555444443 3 33455665555444443
Q ss_pred HH
Q 012629 213 VI 214 (459)
Q Consensus 213 ~~ 214 (459)
.+
T Consensus 388 ~~ 389 (524)
T PF05977_consen 388 LI 389 (524)
T ss_pred HH
Confidence 33
No 199
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.68 E-value=2.3e-07 Score=91.44 Aligned_cols=110 Identities=19% Similarity=0.192 Sum_probs=80.3
Q ss_pred hhhhccccCCCccCCc---hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 012629 267 VFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (459)
Q Consensus 267 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (459)
.....|.+.++ +|.+ .++..+...++..++.++.|++.||+|||+ .+..+..+..+...........
T Consensus 21 ~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~------- 90 (485)
T TIGR00711 21 VNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRR--LFLISTFAFTLGSLLCGVAPNL------- 90 (485)
T ss_pred HHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHH--HHHHHHHHHHHHHHHHhCcCCH-------
Confidence 34556666543 4443 377888888999999999999999999987 3445544444444433322211
Q ss_pred CCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+.+++..++.|++.+...+...+++.|.+|+++|+++.++.+.
T Consensus 91 --------~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 133 (485)
T TIGR00711 91 --------ELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGL 133 (485)
T ss_pred --------HHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 3566778888999888889999999999999999999887765
No 200
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.67 E-value=2.7e-07 Score=90.68 Aligned_cols=156 Identities=12% Similarity=0.017 Sum_probs=92.6
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHh---h--CC------ch
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK---H--SP------QY 124 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~---~--~~------~~ 124 (459)
..+.|.+.+++|.+..+.+.......+.+.++.++.|+++||+|||+.+..+.++.+++. +.+ . .+ +.
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN 383 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence 334456678889988777777777777777888899999999999999998877776654 333 1 12 22
Q ss_pred HHHHHHHHHHHhHhhhhhhhhhhhhhhhcc---ccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccch
Q 012629 125 KILMIGRILGGIATSLLFSAFESWLVAEHN---KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 201 (459)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~---~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f 201 (459)
..+....+..+.......+.. ..++.|.. +|+...+ .......+|..+++.+.+.+.++.+ |+..|
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~--------~~~~~~~lg~~i~~~~~~~~~~~~~--~~~~f 452 (481)
T TIGR00879 384 VAIVFILLFIAFFAMGWGPVP-WVIVSEIFPLSLRPKGIS--------IAVAANWLANFIVGFLFPTMLESIG--VGGVF 452 (481)
T ss_pred HHHHHHHHHHHHHHccccCee-hhhhhccCChHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHhcC--cccee
Confidence 222222222222222222333 32556652 2333222 1222334666666676666665444 55667
Q ss_pred hhHHHHHHHHHHHHHhhccccC
Q 012629 202 DAAACFLAIGMVIILSSWTENY 223 (459)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~ 223 (459)
++.+.+.++..+......||++
T Consensus 453 ~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 453 IFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred hhHHHHHHHHHHHHheecccCC
Confidence 7777777766666655566654
No 201
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.67 E-value=5e-05 Score=72.05 Aligned_cols=144 Identities=17% Similarity=0.064 Sum_probs=78.9
Q ss_pred HHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHH
Q 012629 241 VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQ 317 (459)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~ 317 (459)
+...+++ .+...+...+.+....++ ...+..|+... |.+. |..-+...+.++.++++..++.+|+|..+. -.
T Consensus 253 ~~Y~~q~-vflas~alalLY~TVLsf-~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~--G~ 327 (432)
T PF06963_consen 253 RTYFRQP-VFLASFALALLYFTVLSF-GGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRA--GL 327 (432)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHhcC-cHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh--HH
Confidence 3344444 334444544544444443 33344455443 4544 455566678899999999999999998774 23
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 318 IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.+.......+......... .. .+........++.+.++--+|.=..--...-+++|.+|+++||+..|+-+.
T Consensus 328 ~~l~~q~~~L~~~v~~~~~-~~----~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~s 399 (432)
T PF06963_consen 328 WSLWWQWVCLALCVVSFWA-PG----SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNS 399 (432)
T ss_pred HHHHHHHHHHHHHHHHHhc-CC----CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHH
Confidence 3333222222222111111 00 110111123444455555555554556778899999999999999877554
No 202
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.66 E-value=9.3e-07 Score=84.64 Aligned_cols=131 Identities=10% Similarity=0.104 Sum_probs=81.9
Q ss_pred ccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q 012629 271 TPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGI 347 (459)
Q Consensus 271 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (459)
.|.+. +.++.+. +...+...++..++.++.|+++||+|||+ .+..+.....+...........
T Consensus 31 ~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~--~~~~~~~~~~~~~~~~~~~~~~----------- 96 (394)
T PRK11652 31 IADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP--VILVGMSIFILGTLVALFAHSL----------- 96 (394)
T ss_pred HHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH--HHHHHHHHHHHHHHHHHHHccH-----------
Confidence 44443 3345544 66777888889999999999999999987 3444444444433332222111
Q ss_pred cccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHH
Q 012629 348 SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSI 421 (459)
Q Consensus 348 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (459)
+.+++...+.|++.+...+.......|.++++.++.+.+..+.+ .++.+++.+.+. .++...+...++
T Consensus 97 ----~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~--~g~~~~f~~~~~ 170 (394)
T PRK11652 97 ----TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL--FGWRACYLFLLL 170 (394)
T ss_pred ----HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cChHHHHHHHHH
Confidence 35566677778877777777788889999988888877665552 233444444443 234444444433
No 203
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.66 E-value=5.3e-07 Score=89.18 Aligned_cols=109 Identities=14% Similarity=0.072 Sum_probs=77.9
Q ss_pred hhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
....|.+. +.++.+. +...+...++..++.++.|++.||+|||+ .+..+..+..+......+..+.
T Consensus 40 ~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~-------- 108 (496)
T PRK03893 40 TLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRL--AMVISIVLFSVGTLACGFAPGY-------- 108 (496)
T ss_pred HHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHhHH--------
Confidence 34445543 3456544 56677777889999999999999999987 3444444444444443333222
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+.+.+...+.|++.+...+....++.|.+|++.|+++.++...
T Consensus 109 -------~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 151 (496)
T PRK03893 109 -------WTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLIS 151 (496)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 3556677888888888888899999999999999998877665
No 204
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.66 E-value=8.2e-07 Score=87.09 Aligned_cols=106 Identities=9% Similarity=-0.002 Sum_probs=67.3
Q ss_pred hccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 012629 270 WTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (459)
Q Consensus 270 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (459)
+.|.+ .+.++.+. +...+...++..++.++.|+++||+|||+ .+..+.....+...+..+....
T Consensus 58 ~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~--~~~~~~~~~~~~~~~~~~~~s~---------- 124 (476)
T PLN00028 58 LLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRY--GSAFLLMLTAPAVFCMSLVSSA---------- 124 (476)
T ss_pred HHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH--HHHHHHHHHHHHHHHHHHhcCH----------
Confidence 34444 34456544 45566667788899999999999999987 2444444444333332222211
Q ss_pred ccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 347 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+.+++..++.|++.+.. .....++.|.+|++.|+++.|+.+.
T Consensus 125 -----~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~ 166 (476)
T PLN00028 125 -----TGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAG 166 (476)
T ss_pred -----HHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHH
Confidence 23444556667766643 3355678999999999999988754
No 205
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.65 E-value=1.1e-06 Score=80.81 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=85.1
Q ss_pred ccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhh
Q 012629 66 TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSA 144 (459)
Q Consensus 66 ~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~ 144 (459)
++|+++++.+..++.......++....+++.||+|+||.+..+..+..++. +....++... ...-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHH
Confidence 368999999988888888888888899999999999999888877776654 3344444332 33555889999999999
Q ss_pred hhhhhhhhc-cc-cccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhH
Q 012629 145 FESWLVAEH-NK-RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 204 (459)
Q Consensus 145 ~~~~~i~~~-~~-r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~ 204 (459)
..+ ...+. .+ .+...+ . .. ...+|..+.|.+.+.+.+..+. +..|++.
T Consensus 251 ~~s-~a~~~~~~~~~~asa----i----~~-~~~~Gg~i~P~l~G~lad~~g~--~~a~~v~ 300 (310)
T TIGR01272 251 IFS-LALNALGRHTSQGSG----I----LC-LAIVGGAIVPLLQGSLADCLGI--QLAFALP 300 (310)
T ss_pred HHH-HHHhhhhhhhhhhHH----H----HH-HHHhcchHHHHHHHHHHHhccc--hHHHHHH
Confidence 866 54443 22 222111 1 12 2346777777877777765443 4555543
No 206
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.64 E-value=8.7e-07 Score=85.80 Aligned_cols=139 Identities=20% Similarity=0.231 Sum_probs=96.9
Q ss_pred HHHHHHHhhhhccchhhhhhhc-cCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhC-
Q 012629 45 VYSLMMAGDWLQGPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS- 121 (459)
Q Consensus 45 ~~~~~~~~~~~~~p~l~~~~~~-~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~- 121 (459)
..++..++..+.....+...++ +|.+ ...+.+.....+.+.++.+++++++||+|+|+.+..+..+.+++. +..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH
Confidence 3333344444444444444443 4444 566677677777788888899999999999999999999998875 44554
Q ss_pred -CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc------cccccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q 012629 122 -PQYKILMIGRILGGIATSLLFSAFESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (459)
Q Consensus 122 -~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~------~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (459)
+|.+.+++.-++.|++.+...+...+ +++|. +...++.+.....++...-++.+++..+.+.+
T Consensus 312 ~~~~~~~~i~~~l~gi~~~~~~~~~~a-~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 312 PGSPWLVLILFILAGIGYGAFFVIPWA-MLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred hhhHHHHHHHHHHhHhhhccccccccc-ccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 58999999999999999999887766 76665 22235566666666666666666666554443
No 207
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.64 E-value=2.9e-06 Score=80.66 Aligned_cols=118 Identities=14% Similarity=0.068 Sum_probs=70.7
Q ss_pred hhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHH-H-H--Hhh-CCchHHHHHHHHHHHhHh
Q 012629 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS-C-I--TKH-SPQYKILMIGRILGGIAT 138 (459)
Q Consensus 64 ~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~-~-l--~~~-~~~~~~l~~~r~l~G~~~ 138 (459)
.+++|.++.+.|.......+...++.++.|++.||+|||+.+..+..+..+. . + ... ..+++...+.-.+.+.+.
T Consensus 222 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (377)
T PRK11102 222 IELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCV 301 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3568999999998888888878888889999999999999998887765442 2 1 122 234454444444444444
Q ss_pred hhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 012629 139 SLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (459)
Q Consensus 139 ~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (459)
+...+.... ++.|..+ +.... ..+........+|..+++.++.
T Consensus 302 ~~~~~~~~~-~~~~~~~-~~~g~----~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 302 SMISSNAMA-VILDEFP-HMAGT----ASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHhhHHHHH-HHhcccc-ccchH----HHHHHHHHHHHHHHHHHHHHHh
Confidence 544444433 4554322 12222 1222223334456666665544
No 208
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.61 E-value=4.2e-07 Score=81.86 Aligned_cols=105 Identities=18% Similarity=0.158 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
|.+.+.+++...+.++..|.++||+|||+ ++..+.....+...+.....+. ..++.+=++.|+
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkp--vll~c~~~va~s~ll~~~S~~F---------------~afv~aR~l~Gi 133 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKP--VLLACLIGVALSYLLWALSRNF---------------AAFVLARFLGGI 133 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchH--HHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHhhhh
Confidence 78889999999999999999999999998 3545544444433333322222 022333455555
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhc
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYN 406 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~ 406 (459)
..+ ......++++|.++++.|+.+++..++. .|+.+|+.+..
T Consensus 134 ~kg-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 134 FKG-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ccC-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 555 5577899999999999999998777763 56667766644
No 209
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.60 E-value=1e-06 Score=87.23 Aligned_cols=101 Identities=8% Similarity=0.014 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
+.+.+...++.+++.++.|+++||+|||+. +.....+..+...+....... .+. ...+.+++.-++.|+
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~--~~~~~~~~~v~~~~~~~~~~~-------~~~--~~~~~~~~~r~l~G~ 127 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKLGRKRV--YGMELIIMIIATVASGLSPGS-------SPK--SVMATLCFWRFWLGV 127 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHH--HHHHHHHHHHHHHHHHHccCc-------ccc--hHHHHHHHHHHHHHH
Confidence 567777888999999999999999999982 444444444433332222111 000 001356778889999
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
+.+...+....+.+|.+|++.|+++.++.+..
T Consensus 128 ~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~ 159 (502)
T TIGR00887 128 GIGGDYPLSAIITSEFATKKWRGAMMAAVFAM 159 (502)
T ss_pred HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHH
Confidence 99999999999999999999999999887663
No 210
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.59 E-value=3.1e-06 Score=82.10 Aligned_cols=57 Identities=21% Similarity=0.318 Sum_probs=43.6
Q ss_pred cchhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHH
Q 012629 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI 113 (459)
Q Consensus 57 ~p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~ 113 (459)
..++|... +++|.+..+.+...........+++++.|+++||+|||+.+.....+.+
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~ 320 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAA 320 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 44555554 5689988888877777777677888889999999999998877665443
No 211
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.58 E-value=1.8e-06 Score=84.69 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=77.3
Q ss_pred chhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHh---h--CCchHHHHHHH
Q 012629 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITK---H--SPQYKILMIGR 131 (459)
Q Consensus 58 p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~---~--~~~~~~l~~~r 131 (459)
.+.+...++..-+.+..+.+.....+...++.+++++++||+|+|+.+..+..+..++. ... + .++.+.+++.-
T Consensus 252 ~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 331 (473)
T PRK10429 252 GFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAG 331 (473)
T ss_pred hheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHH
Confidence 33333444433344555555555545566777889999999999999998887766543 221 1 34566677777
Q ss_pred HHHHhHhhhhhhhhhhhhhhhc------cccccchhhHHHHHHHHHHHHHHHHHHHhhh
Q 012629 132 ILGGIATSLLFSAFESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGL 184 (459)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~------~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 184 (459)
++.|++.+...+...+ +++|. +...+..+......+...-++.++|+.+.+.
T Consensus 332 ~l~g~~~~~~~~~~~a-m~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 332 ILLNIGTALFWVLQVI-MVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHHHHHHHHHHH-HHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889988888777655 65554 1223334444445555555555555554443
No 212
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.57 E-value=1.2e-06 Score=82.55 Aligned_cols=136 Identities=10% Similarity=0.059 Sum_probs=82.5
Q ss_pred hhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 012629 269 LWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (459)
Q Consensus 269 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (459)
...|.+.+ +++.+. +...+.+.++..++++..|+++||+|||+ +....................
T Consensus 12 ~~lp~i~~-~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~---~~~~~~~~~~~~~~~~~~~~~--------- 78 (368)
T TIGR00903 12 PVLSLVAE-DIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRW---FLFGSLATFAAAAGRLLDPFN--------- 78 (368)
T ss_pred hhHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchH---HHHHHHHHHHHHHHHHHHhcc---------
Confidence 34444433 345443 67777788889999999999999999776 333322222222111111011
Q ss_pred CccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHH
Q 012629 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMC 419 (459)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~ 419 (459)
.+.+++.-++.|++.+. .+......+|.+|+++|+++.++.+.. .+...+..+.+. .++...+...
T Consensus 79 -----~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~--~gWr~~f~~~ 150 (368)
T TIGR00903 79 -----YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA--GGLQLLIIPI 150 (368)
T ss_pred -----HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cchHHHHHHH
Confidence 13566777888888874 455566678999999999999887763 223344444433 4566666664
Q ss_pred HHHHHH
Q 012629 420 SIFLLV 425 (459)
Q Consensus 420 ~~~~~~ 425 (459)
++..++
T Consensus 151 ~~l~~~ 156 (368)
T TIGR00903 151 AAVAAA 156 (368)
T ss_pred HHHHHH
Confidence 444433
No 213
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.56 E-value=8.6e-07 Score=83.60 Aligned_cols=102 Identities=18% Similarity=0.163 Sum_probs=74.0
Q ss_pred cchhhhhhhccCCCccchhhHHHHHH-HHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhh-C----------Cc
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGF-GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH-S----------PQ 123 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~-~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~-~----------~~ 123 (459)
...+|...+++|.++++.+.+..... ....++.+++|++.||+|||+.+..+.++.+++. +..+ . ++
T Consensus 229 ~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 229 TVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred HHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 34445555669999999987766543 4455667789999999999999888887777654 2222 2 45
Q ss_pred hHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccc
Q 012629 124 YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFE 159 (459)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~ 159 (459)
.+.+....++.+++.+...+...+ ++.|..+++.+
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~p~~~~ 343 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVA-FLSKLSNPKFG 343 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHH-HHHHhcCCCcc
Confidence 577788889999999999888866 87776433333
No 214
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.55 E-value=6.3e-07 Score=71.67 Aligned_cols=89 Identities=11% Similarity=0.126 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcch
Q 012629 289 TFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF 368 (459)
Q Consensus 289 ~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 368 (459)
...++.+++.+..+++.||+|||+. +........+........... +.......+.+++.+..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~~~~~~ 68 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPV--LLVGLFIFVLSTAMFALSSNI---------------TVLIIARFLQGFGAAFA 68 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHH--HHHHHHHHHHHHHHHHHhccH---------------HHHHHHHHHHHHHHHHH
Confidence 4457788899999999999998872 434433333333332222111 35566678888888888
Q ss_pred hhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 369 WPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.+..+.+..|..|+++|+++.++.+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (141)
T TIGR00880 69 LVAGAALIADIYPPEERGVALGLMSA 94 (141)
T ss_pred HHhHHHHHHHHCChhhhhHHHHHHHH
Confidence 89999999999999999999888776
No 215
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.53 E-value=8.1e-07 Score=80.53 Aligned_cols=193 Identities=17% Similarity=0.104 Sum_probs=117.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCCCCC-CCCC--ccchh-hHHHHHHHH----HHHHhhhhccchhhh-hhhccCCCccc
Q 012629 3 MFFYLVFGALGAVVAALELSKTNKDRI-NTSS--AFNSF-KNNYLLVYS----LMMAGDWLQGPYVYY-LYSTYGFGKGE 73 (459)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~-~~~~~~~~~----~~~~~~~~~~p~l~~-~~~~~~~s~~~ 73 (459)
||..+.++.+.-..+-+.+.+..++++ +.++ ++.+. +...+.++. ..+.+..+.-|.++. +.+.+..+..+
T Consensus 228 PFlVL~~v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~ 307 (464)
T KOG3764|consen 228 PFLVLAIVLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWE 307 (464)
T ss_pred cHHHHHHHHHHHHHHHHheeCccccCccccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcc
Confidence 788999999999999988888754443 2222 22211 111222222 222233444666655 34667756669
Q ss_pred hhhHHHHHHHHhhhhhccccchhcccCcchh--hHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhh-
Q 012629 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRA--CVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWL- 149 (459)
Q Consensus 74 ~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~--~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~- 149 (459)
+|..+.-......++..+.|.++||+++.+. -..+++..+.++ ...+++++..+.+-++..|++.+.........+
T Consensus 308 ~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~ 387 (464)
T KOG3764|consen 308 VGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLG 387 (464)
T ss_pred eeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhH
Confidence 9977666666666888899999999994333 333344444444 447899999999988888888777766554422
Q ss_pred -hhhccccc-cchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccc
Q 012629 150 -VAEHNKRG-FEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (459)
Q Consensus 150 -i~~~~~r~-~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~ 198 (459)
+.|.++.. .. ... ......-.+..+|..+||.+++.+.+..|+.|.
T Consensus 388 ~lvd~rh~s~~~--vYG-sVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl 435 (464)
T KOG3764|consen 388 YLVDPRHVSGFN--VYG-SVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWL 435 (464)
T ss_pred Hhcchhhccccc--eee-eHHHHHHHHHHHhhhccccccchheeehhHHHH
Confidence 22221111 10 111 222344446778888999999998877666654
No 216
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.53 E-value=2.8e-06 Score=81.58 Aligned_cols=112 Identities=12% Similarity=0.102 Sum_probs=79.0
Q ss_pred hhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
....|.+ ++.++.+. +...+...++..++++..+++.||+|||+ .+..+..+.++...........
T Consensus 23 ~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~--~~~~g~~l~~~g~~l~~~~~~~-------- 91 (410)
T TIGR00885 23 NPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKA--GILLGLFLYALGAFLFWPAAEI-------- 91 (410)
T ss_pred HHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHHHHHHHHHHhh--------
Confidence 3455555 44566654 67778888999999999999999999988 3555555555554442222111
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
++ .+..++..++.|.+.+...+..+.++.+..|++.|++..++.+.
T Consensus 92 ~~----~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (410)
T TIGR00885 92 MN----YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQS 137 (410)
T ss_pred cc----HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHH
Confidence 01 13556777888999999889999999999999988887776555
No 217
>PRK10133 L-fucose transporter; Provisional
Probab=98.51 E-value=4.2e-06 Score=81.08 Aligned_cols=134 Identities=11% Similarity=0.066 Sum_probs=86.5
Q ss_pred hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhh
Q 012629 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFS 143 (459)
Q Consensus 65 ~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (459)
+.+|.++.+.+..+........++..+.|++.||+|||+++..+..+..+.. +..+.++.. -+..-.+.|++.+..+|
T Consensus 288 ~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P 366 (438)
T PRK10133 288 EIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYP 366 (438)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHH
Confidence 5689999999988888888788888899999999999999988877776654 334455532 24556789999999999
Q ss_pred hhhhhhhhhc-cc-cccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHH
Q 012629 144 AFESWLVAEH-NK-RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (459)
Q Consensus 144 ~~~~~~i~~~-~~-r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i 210 (459)
...+ ...|. .+ .+...+.. . . ..+|..++|.+.+.+.+..+ +-+..|.+..+..+.
T Consensus 367 ~~~s-~a~~~~~~~~~~as~l~----~-~----~~~g~~~~~~i~G~l~~~~g-~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 367 TIFS-LGIKNLGQDTKYGSSFI----V-M----TIIGGGIVTPVMGFVSDAAG-NIPTAELIPALCFAV 424 (438)
T ss_pred HHHH-HHHcccchhhccchhHH----h-H----HhccchHHHHHHHHHHHhcc-chHHHHHHHHHHHHH
Confidence 9877 54443 22 22222211 1 1 11344445555555554333 134556554444443
No 218
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.50 E-value=2.9e-06 Score=77.93 Aligned_cols=147 Identities=16% Similarity=0.084 Sum_probs=100.4
Q ss_pred hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHH-HhhCCchHHHHHHHHHHHhHhhhhhh
Q 012629 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFS 143 (459)
Q Consensus 65 ~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l-~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (459)
+++|++..++..........+.+++.++|+|.||+|.|+++..+.++..+.++ .-+...-..+.+.-.+.|...|....
T Consensus 281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence 58999999998777777777888999999999999999999999999988653 34445555666777889999999999
Q ss_pred hhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhcc
Q 012629 144 AFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWT 220 (459)
Q Consensus 144 ~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 220 (459)
...+ +..+. ++.++..+ .+++..- .+..++|.+-+.+.+..+ .-|.-+....++..+.+.... +.|
T Consensus 361 ~SRS-y~~~lvp~~k~~~fFg----lyaltgr----a~S~~gp~lv~v~t~iTg-~~r~g~~~i~vll~iGl~~L~-~v~ 429 (438)
T COG2270 361 SSRS-YLARLVPKGKEGRFFG----LYALTGR----AASFLGPFLVAVITQITG-SSRAGVLSIIVLLLIGLLLLL-RVK 429 (438)
T ss_pred HHHH-HHHHhCCCccccceee----hhhhhhh----HHHHHHHHHHHHHHHHhc-chhhHHHHHHHHHHhhHhhEE-eec
Confidence 9877 76666 33444444 2332222 444555555555554343 235555555555555544443 455
Q ss_pred cc
Q 012629 221 EN 222 (459)
Q Consensus 221 ~~ 222 (459)
++
T Consensus 430 ~~ 431 (438)
T COG2270 430 VP 431 (438)
T ss_pred CC
Confidence 44
No 219
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.50 E-value=5.1e-06 Score=91.04 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=77.0
Q ss_pred hhhccCCCcc-chhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhh
Q 012629 63 LYSTYGFGKG-EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSL 140 (459)
Q Consensus 63 ~~~~~~~s~~-~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~ 140 (459)
+.+++|.+.. +.|++.+...+...+++++.|+++||+++|+.+.++.++.+++. +..+.++.+.+++..++.|++.+.
T Consensus 259 ~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 338 (1146)
T PRK08633 259 AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGL 338 (1146)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3467899988 88888888777777888899999999999999988888777765 446677888888889999999998
Q ss_pred hhhhhhhhhhhhc---cccccchh
Q 012629 141 LFSAFESWLVAEH---NKRGFEQQ 161 (459)
Q Consensus 141 ~~~~~~~~~i~~~---~~r~~~~~ 161 (459)
..+...+ ++.+. +.|+...+
T Consensus 339 ~~~~~~~-~~~~~~p~~~rg~~~~ 361 (1146)
T PRK08633 339 FIVPLNA-LIQFRAPEKELGKVLA 361 (1146)
T ss_pred hhHHHHH-HHhhcCCccchhhhhH
Confidence 8777655 66655 44555544
No 220
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.49 E-value=7.6e-06 Score=77.37 Aligned_cols=104 Identities=7% Similarity=-0.068 Sum_probs=80.4
Q ss_pred cCCCccCCch----hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccc
Q 012629 274 LSPNDEEIPH----GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (459)
Q Consensus 274 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (459)
++.+.+|.+. |.+...+..+..+..+..|+++||+|.|+ ++....+.-++...+..+....
T Consensus 51 ~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~--vL~l~~l~Wsl~t~L~~fa~Sl------------- 115 (511)
T TIGR00806 51 YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP--VLVLQALSFVCVWLLLLLGTSV------------- 115 (511)
T ss_pred HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 3333555533 67888888999999999999999999988 3555555555555555544333
Q ss_pred cchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
+.+.+.-+++|++.+..+ ....++.+.+|+++|+++.|+.+.+
T Consensus 116 --~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg 158 (511)
T TIGR00806 116 --WHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAA 158 (511)
T ss_pred --HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 366778899999999888 9999999999999999999888874
No 221
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.49 E-value=9.8e-07 Score=89.05 Aligned_cols=124 Identities=10% Similarity=0.076 Sum_probs=83.2
Q ss_pred hhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCC----
Q 012629 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS---- 340 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---- 340 (459)
....+.+ ++.++.+. |.+.+.+.++..++.++.+++.||.+||+. +.++.++.+++.++..+.+....+.
T Consensus 53 ~~~l~~i-ek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~--i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 53 NSSLTTI-ERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIV--IGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred Hhhchhh-hhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceE--EEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 3344444 34455543 778888889999999999999999998873 5566666565555543332100000
Q ss_pred -------------------------------CCCCCCc-cccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhh
Q 012629 341 -------------------------------NVKSGGI-SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTI 388 (459)
Q Consensus 341 -------------------------------~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~ 388 (459)
++....- ......++++-++.|++.+..++...+++.|.+|++.|+..
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~ 209 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLY 209 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHH
Confidence 0000000 11123566788999999999999999999999999999999
Q ss_pred hhhhhh
Q 012629 389 MNFFRI 394 (459)
Q Consensus 389 ~g~~~~ 394 (459)
.|+.+.
T Consensus 210 ~~i~~~ 215 (633)
T TIGR00805 210 IGILES 215 (633)
T ss_pred HHHHHH
Confidence 988776
No 222
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.47 E-value=3.5e-06 Score=72.83 Aligned_cols=157 Identities=17% Similarity=0.218 Sum_probs=94.1
Q ss_pred cchhhHHHHHHHHHHHHhhhhc---cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHH
Q 012629 35 FNSFKNNYLLVYSLMMAGDWLQ---GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (459)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~---~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (459)
+...-|.+..+|.+-.....-. +|. ...+.+|+|+...+.+.+..+.++...+|+.|.++||+|++...+.+..+
T Consensus 262 f~ppfw~~~iicv~yyva~fPFi~lg~~--fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 262 FYPPFWVLVIICVLYYVAWFPFITLGPM--FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI 339 (459)
T ss_pred cCccHHHHHHHHHHHHHHHHHHhhhhHH--HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH
Confidence 3333466555555444322111 231 34588999999999999999999999999999999999999998887766
Q ss_pred HHHHH--HHhhCCchHHHHHHHHHHHhHhhh----hhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q 012629 112 YILSC--ITKHSPQYKILMIGRILGGIATSL----LFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (459)
Q Consensus 112 ~~~~~--l~~~~~~~~~l~~~r~l~G~~~~~----~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (459)
..+.. ...+ +++.=+.+..+.|+.... .+|.... ++.|+ +-|...+..+...+ +|..+.+++
T Consensus 340 ~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~-~vpE~-qLGTaygf~qsIqN--------Lgla~i~Ii 407 (459)
T KOG4686|consen 340 LTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVAS-LVPEE-QLGTAYGFIQSIQN--------LGLAFIPII 407 (459)
T ss_pred HHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhh-hCCHH-HhcchHHHHHHHHh--------hhhhHHhhh
Confidence 65532 2222 222223445556664433 4555533 55553 34554444333333 555556677
Q ss_pred hhhcccccC-CccccchhhHH
Q 012629 186 GNLLVDSFS-LGPVAPFDAAA 205 (459)
Q Consensus 186 ~~~l~~~~~-~~w~~~f~~~~ 205 (459)
++.+.++.+ ..|.-.|....
T Consensus 408 ag~i~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 408 AGFIADGDGSYDNLEAFFLII 428 (459)
T ss_pred hheeecCCCchhhHHHHHHHH
Confidence 777766554 44544444433
No 223
>TIGR00898 2A0119 cation transport protein.
Probab=98.45 E-value=1.5e-06 Score=86.28 Aligned_cols=94 Identities=16% Similarity=0.294 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
+...+...++.+++.++.|+++||+|||+ .+..+..+..+......+.... +.+++..++.|+
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~--~~~~~~~~~~i~~~~~~~~~~~---------------~~~~~~r~l~G~ 192 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKK--VLLLSTLVTAVSGVLTAFSPNY---------------TVFLVFRLLVGM 192 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchH--HHHHHHHHHHHHHHHHHHcccH---------------HHHHHHHHHHHh
Confidence 67788888999999999999999999987 3444444444444333332222 356777888999
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+.+...+...+++.|.+|++.|+.+.++.+.
T Consensus 193 ~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~ 223 (505)
T TIGR00898 193 GIGGIWVQAVVLNTEFLPKKQRAIVGTLIQV 223 (505)
T ss_pred hccchHHHHHHHhheecChhhhHHHHHHHHH
Confidence 9998899999999999999999998877654
No 224
>PRK11462 putative transporter; Provisional
Probab=98.45 E-value=2.6e-05 Score=76.06 Aligned_cols=112 Identities=9% Similarity=-0.040 Sum_probs=62.0
Q ss_pred chhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHH-HHHHhhCCc--hHHHHHHHHHHHhHhhhhhhhhhhhh
Q 012629 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL-SCITKHSPQ--YKILMIGRILGGIATSLLFSAFESWL 149 (459)
Q Consensus 73 ~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~-~~l~~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~~ 149 (459)
..+.+.....+.+.++.+++++++||+|+|+.+..+....++ +.+..+.++ ...+++.-++.|++.+...+...+ +
T Consensus 264 ~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~-m 342 (460)
T PRK11462 264 VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV-M 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 344444555555667777899999999999987765554444 223223222 223444556677776665554433 4
Q ss_pred hhhc------cccccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q 012629 150 VAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (459)
Q Consensus 150 i~~~------~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (459)
++|. +...+..+......+...-+|.++|..+++.+
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 22233334333444455555666666555443
No 225
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.44 E-value=4.2e-06 Score=82.03 Aligned_cols=96 Identities=16% Similarity=0.155 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
|.+.+.+.++..++.++.|++.||+|+|+. +..+..+..+...+....... + .+..++.-++.|+
T Consensus 79 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~--l~~~~~~~~~~~~~~~~~~~~---------~----~~~l~~~r~~~G~ 143 (465)
T TIGR00894 79 GLILSSHFYGQIIIQIPVGYLAGKYVFKWS--IGIGMFLSSVISIVIPWAAGG---------G----IALVVFCRVIQGL 143 (465)
T ss_pred hHHHHHHHHHHHHHHcchHHHHHHhCcchh--hHHHHHHHHHHHHHHHHHHHc---------C----chHHHHHHHHHHH
Confidence 778888889999999999999999999883 444444433333332211111 0 1255667788899
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+.+...|....++.|.+|+++|+++.++.+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 174 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTS 174 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999988766
No 226
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.43 E-value=5.1e-06 Score=72.58 Aligned_cols=129 Identities=19% Similarity=0.142 Sum_probs=89.7
Q ss_pred hHHHHHHHHHHHHhhhhc---cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHH
Q 012629 39 KNNYLLVYSLMMAGDWLQ---GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~---~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~ 115 (459)
||..+..........+-. ..+-|++.+.+|+|.+|.+.+....-+... .+++.|.+.||+|+|.++.++.+...+|
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~-~G~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSY-FGILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 355555544444433222 556678889999999999998877777555 4788999999999999999998888877
Q ss_pred H-HH--hh-----CCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHH
Q 012629 116 C-IT--KH-----SPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFS 168 (459)
Q Consensus 116 ~-l~--~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~ 168 (459)
. +. .. .+++|.+.+..++.|.+.+....+....-+.+. ++||...+......+
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~G 141 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFG 141 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHH
Confidence 3 22 22 246778888888888876666555423133343 778888887666554
No 227
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.43 E-value=1.9e-05 Score=79.41 Aligned_cols=151 Identities=15% Similarity=0.221 Sum_probs=98.5
Q ss_pred hhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcc-cCcchhhHHHHHHHHHHH-HHhhCCc--------hHHHHH
Q 012629 60 VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSC-ITKHSPQ--------YKILMI 129 (459)
Q Consensus 60 l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~~-l~~~~~~--------~~~l~~ 129 (459)
+..+.+.+|.+.++...++........+.+.++|.++|+ +||++.+.++.++..++. +.++... ....++
T Consensus 11 vlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~ 90 (654)
T TIGR00926 11 VLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLL 90 (654)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHH
Confidence 334556788888888777777777777888899999996 699999999999988875 4444211 123566
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhc-cc--cccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhccccc-----CCccccch
Q 012629 130 GRILGGIATSLLFSAFESWLVAEH-NK--RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-----SLGPVAPF 201 (459)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~-~~--r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~-----~~~w~~~f 201 (459)
+-.+..+|.|+.-|...+ ...|. ++ +.++.+. ++..+.. ..+|..+++.+..++.+.. .++|...|
T Consensus 91 gLaLia~G~GgiKp~vsa-f~gdqf~~~~~~~~~s~----F~~fY~~-iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF 164 (654)
T TIGR00926 91 GLALIALGTGGIKPCVSA-FGGDQFEERQLSLRSRF----FSFFYFA-INAGSLISTIITPILRGDVGCFGCQDCYPLAF 164 (654)
T ss_pred HHHHHHhhccccccCchh-hhHhhcCccchhHHHHH----HHHHHHH-HHHHHHHHHHHHHHHHHhhcccccCcchHHHH
Confidence 777888899999888866 77765 22 2233333 3322322 2355555555555543221 13477788
Q ss_pred hhHHHHHHHHHHHHH
Q 012629 202 DAAACFLAIGMVIIL 216 (459)
Q Consensus 202 ~~~~~~~~i~~~~~~ 216 (459)
.+.++..++.++...
T Consensus 165 ~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 165 GVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877776665544
No 228
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.42 E-value=4.8e-06 Score=78.53 Aligned_cols=123 Identities=13% Similarity=0.049 Sum_probs=87.1
Q ss_pred hhhccccCCCccCCch--hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 012629 268 FLWTPALSPNDEEIPH--GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (459)
.+++--++++..+.+. |......-.+.++.-++.+++.+|+|+-+ ++..+..+...=+.......+.
T Consensus 391 ~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~--v~~lgLa~~~~Rf~~~S~L~n~--------- 459 (618)
T KOG3762|consen 391 FTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN--VMYLGLACNVGRFLYYSYLQNP--------- 459 (618)
T ss_pred HHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc--eeeehhhHHHHHHHHHHHhcCc---------
Confidence 3334334455433332 55555556778889999999999999877 3555555544444444433333
Q ss_pred CccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh-------hhhHHHHHhhhcc
Q 012629 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI-------PLNIFVCVVLYNV 407 (459)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-------~~~~~~~~~l~~~ 407 (459)
|..+..-++.|+..+..|....+|++...|++.|+++.++.+. +.|.++|+.+...
T Consensus 460 ------W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~ 522 (618)
T KOG3762|consen 460 ------WMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER 522 (618)
T ss_pred ------hheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee
Confidence 5667778999999999999999999999999999999988776 3566777777554
No 229
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.40 E-value=0.00015 Score=67.72 Aligned_cols=302 Identities=16% Similarity=0.124 Sum_probs=147.8
Q ss_pred hhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc
Q 012629 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH 153 (459)
Q Consensus 75 g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (459)
+.+..+-.+.+.+....+-+..+|...+.=......+..++. +.++++|.+.=+++-.+.+++.|........ +..-+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~-lt~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLS-LTHFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHH-HHHhc
Confidence 344444444555655667778888875544555555667776 4488899988888888888888877766655 55544
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHHhhccccCCC--CC----
Q 012629 154 NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD--PS---- 227 (459)
Q Consensus 154 ~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~---- 227 (459)
+++ ..+ .++. |.+.+.++|+..-..+.+ .++..|..+.....+.++..+..+..+|+++.+ .+
T Consensus 141 ~~~--~l~----~wss----GTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~ 209 (402)
T PF02487_consen 141 GKS--SLS----AWSS----GTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESES 209 (402)
T ss_pred Ccc--ccc----cccC----CcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCC
Confidence 332 122 2222 344444444444333333 456656666666555544333333333321110 00
Q ss_pred --chh-hHHH-H---------HHhhhH-HhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch----hHHHHH
Q 012629 228 --ESK-DLLT-Q---------FRGAAV-AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH----GFIFAT 289 (459)
Q Consensus 228 --~~~-~~~~-~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 289 (459)
+.+ +..+ + .+...+ +..+-++.+...+-....+...|....-..|...-.....+. ......
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~ 289 (402)
T PF02487_consen 210 EDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLL 289 (402)
T ss_pred CCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHH
Confidence 000 0000 0 000011 111222333333334444444444323333443321112212 234445
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchh
Q 012629 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (459)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (459)
+.++..+++--...+ |+ |+ +.+...+..+-+.+..+-.... +....|..++..+.-|+.-|..+
T Consensus 290 YQ~GVFISRSS~~~~--ri--r~---lwils~LQ~~nl~~~~l~s~~~---------fipsi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 290 YQLGVFISRSSLPFF--RI--RR---LWILSLLQVINLVFLLLQSWYR---------FIPSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred HHHHHhhhhcceeee--eh--hh---HHHHHHHHHHHHHHHHHHHHHH---------HhhHHHHHHHHHHHHHHhhhHHH
Confidence 556666655332221 23 33 2222222222222211111110 01112455556677788888888
Q ss_pred hHHHHHHhccCChhhhhhhhhhhhhh--hhHHHHHhh
Q 012629 370 PSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCVVL 404 (459)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~~l 404 (459)
...+..+.|..|+++|--++|..+++ .|..+++.+
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll 390 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLL 390 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 88888889889999999988887774 555555544
No 230
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.39 E-value=2.2e-05 Score=74.45 Aligned_cols=116 Identities=15% Similarity=0.102 Sum_probs=76.3
Q ss_pred CCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhh--CCchHHHHHHHHHHHhHhhhhhhh
Q 012629 68 GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH--SPQYKILMIGRILGGIATSLLFSA 144 (459)
Q Consensus 68 ~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~--~~~~~~l~~~r~l~G~~~~~~~~~ 144 (459)
|.++.+.............++.+++.++.+|+|+|+++.++.++..++. +..+ .++...+++..++.+++.+...+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccc
Confidence 3333333344333333333336689999999999999999999998875 4444 447788889999999999998887
Q ss_pred hhhhhhhhc------cccccchhhHHHHHHHHHHHHHHHHHHHhhh
Q 012629 145 FESWLVAEH------NKRGFEQQWLSITFSKAIFLGNGLVAILSGL 184 (459)
Q Consensus 145 ~~~~~i~~~------~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 184 (459)
..+ +++|. +...++.+.....++...=+|.+++..+.+.
T Consensus 348 ~wa-m~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 348 PWA-MVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred cHH-HhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 755 54443 3334555555555555555555555544433
No 231
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.37 E-value=1.4e-05 Score=87.54 Aligned_cols=120 Identities=9% Similarity=-0.149 Sum_probs=81.9
Q ss_pred hhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhC---------------
Q 012629 59 YVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHS--------------- 121 (459)
Q Consensus 59 ~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~--------------- 121 (459)
.+|.+. +.+|.++.+.|++.+...+...+++++.|+++||.++++.+..+.++.++.. ...+.
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 344444 5689999999998888888788888899999999888777666665555432 23332
Q ss_pred -----CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhh
Q 012629 122 -----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (459)
Q Consensus 122 -----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~ 183 (459)
++.+.+++..++.|++.+...+...+ ++.+. +.+++..+..+. ...++..+|+.+.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~p~~~~G~v~g~~~~----~~~~~~~ig~~~~g 391 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFA-ALQAWANPAHRARVIAANNV----LNAAFMVAGTIILA 391 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHH-HHHhhCCcccceeeeHHHHH----HHHHHHHHHHHHHH
Confidence 67778888889999999888877655 66655 556666663333 33334444444333
No 232
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.37 E-value=2.6e-05 Score=70.32 Aligned_cols=170 Identities=14% Similarity=0.041 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhccc-CcchhhHHHHHHHHHHH-
Q 012629 39 KNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC- 116 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~- 116 (459)
.|.+.....+-....+.....+|.++.|.|+|..+.|++.+...+.+...+...-.+++|. ++|+..+....++.++.
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~ 289 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLV 289 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 3554444444444455557778899999999999999888888887888777788888865 56666666666666664
Q ss_pred HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCc
Q 012629 117 ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG 196 (459)
Q Consensus 117 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~ 196 (459)
-+.+.+.-..+.- -++.|+|.|..++.+.. ++.+..+..+..+. ..++.+..|+.++ ..||.+.+++-|..+ +
T Consensus 290 G~~~~P~~~~~lw-~~llG~G~G~~F~laL~-li~~rs~~a~~Aa~---LSgmaQg~GYllA-a~GP~l~G~lhDa~g-s 362 (395)
T COG2807 290 GLLLAPGQLPILW-ALLLGLGQGGAFPLALT-LILLRSSDAAIAAA---LSGMAQGVGYLLA-AFGPWLFGFLHDATG-S 362 (395)
T ss_pred HHHHhhhhHHHHH-HHHHhCccchHHHHHHH-HHHhhcCChHHHHH---HHHHhhhhhHHHH-hhhhhhHhHHHHhcC-C
Confidence 2345444332222 48999999999999877 77765322222222 3333444455333 456777777665443 5
Q ss_pred cccchhhHHHHHHHHHHHH
Q 012629 197 PVAPFDAAACFLAIGMVII 215 (459)
Q Consensus 197 w~~~f~~~~~~~~i~~~~~ 215 (459)
|+.+........++..+.-
T Consensus 363 w~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 363 WSAPLVLLALATLLMLIFG 381 (395)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 6666665555544444433
No 233
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.36 E-value=1.1e-05 Score=77.11 Aligned_cols=106 Identities=16% Similarity=0.223 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
+...++..+++++|++..++++||+|||.. +........+...+......... ...++++-++.|+
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~--l~~~~~l~~~~~~~~~~s~~~~~------------~e~li~GR~i~Gl 128 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNA--LLLSNLLAVLAALLMGLSKSAPS------------FEMLILGRLIVGL 128 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHH--HHHHHHHHHHHHHHHHHHHHhhh------------HHHHHHHHHHHHH
Confidence 456677779999999999999999999963 44444433333333333222211 1377888999999
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhhh--hhHHHHHh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCVV 403 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~~ 403 (459)
..+........++.|..|++.||....+..+. .+..++..
T Consensus 129 ~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~ 170 (485)
T KOG0569|consen 129 ACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQV 170 (485)
T ss_pred HhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999887666654 34444433
No 234
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.36 E-value=8.8e-06 Score=78.50 Aligned_cols=144 Identities=13% Similarity=0.152 Sum_probs=78.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhh----cCCCCcchhHHHHH
Q 012629 248 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMA----RSPPRVESYMQIVF 320 (459)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~l~~~~ 320 (459)
+.+.++......+.+ +.....+.+.|.+ ..+.+. +.+.....+..++..++.|+++| |+|||+. .+..+.
T Consensus 5 ~li~~~~~~~Giq~~-~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp-~il~g~ 81 (477)
T TIGR01301 5 KLLRVASVAAGVQFG-WALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP-FIAAGA 81 (477)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH-HHHHHH
Confidence 444444444444544 3334555555654 345544 56667777889999999999999 5999983 222223
Q ss_pred HHHHHHHHHHHHhhhccC--CCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhh--hhhhhhhhh
Q 012629 321 VVSSVSLLLPIVTSFLVA--PSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEAR--STIMNFFRI 394 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r--~~~~g~~~~ 394 (459)
....+.+.++........ ..+....+.....+..++++.+..++.+...+...+++.|..|+++| +.+.++.+.
T Consensus 82 ~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~ 159 (477)
T TIGR01301 82 ALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF 159 (477)
T ss_pred HHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence 333333233222111100 00000000011112334455566677777888889999999998865 456655443
No 235
>PTZ00207 hypothetical protein; Provisional
Probab=98.30 E-value=8.7e-06 Score=80.35 Aligned_cols=115 Identities=12% Similarity=-0.052 Sum_probs=71.3
Q ss_pred hhhccccCCCccCCchhHHHHHHHHH--HHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 012629 268 FLWTPALSPNDEEIPHGFIFATFMLA--SMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (459)
..+.|.+ ++.+|.+...+..+..++ .....+..|++.||+|+|+ ++.++.....++.....+....
T Consensus 47 sv~s~~L-~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~--vllig~ll~~iG~ll~ala~~~--------- 114 (591)
T PTZ00207 47 NLISGAM-QARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRP--IFVLSMTVFCLGTLLFALTFQE--------- 114 (591)
T ss_pred HHHHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHhcc---------
Confidence 4445544 455676654333222222 2234557899999999988 4566666666655554443111
Q ss_pred CccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
......+.+.+..++.|.+.+..++.....+.+.+| ++||++.|+....
T Consensus 115 ~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~ 163 (591)
T PTZ00207 115 VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTF 163 (591)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHH
Confidence 001112456667778888888777778888899887 6789998887764
No 236
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.29 E-value=1.7e-05 Score=77.44 Aligned_cols=119 Identities=18% Similarity=0.117 Sum_probs=80.3
Q ss_pred hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHHH-h-h---------CCchHHHHHHHHH
Q 012629 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCIT-K-H---------SPQYKILMIGRIL 133 (459)
Q Consensus 65 ~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~-~-~---------~~~~~~l~~~r~l 133 (459)
+++|.++.++|.+.....+...++....+++.+|++.|+++.++.++.+++.+. . . .++.+.+...-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 578999999998888877777777788999999999999999999988876422 1 1 1444455666788
Q ss_pred HHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhh
Q 012629 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (459)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 185 (459)
.+++.+....+... ++.+..+++..........+ ...+|..++..+++.+
T Consensus 361 ~~~~~g~~~~~~~~-~~~~~~p~~~egt~~al~~s-~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 361 AEVLAQLKFMPFLV-LLARLCPSGCESSVFALLAS-ILHLGSSVSGFLGVLL 410 (468)
T ss_pred HHHHHHHHHccHHH-HHHHhCCCCceehHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 88888888777755 77777444444433222222 2344444444433333
No 237
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.29 E-value=1.6e-06 Score=60.65 Aligned_cols=68 Identities=22% Similarity=0.221 Sum_probs=57.0
Q ss_pred HHHHHHHhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHH
Q 012629 45 VYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (459)
Q Consensus 45 ~~~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~ 112 (459)
.+++...+.+...|+++...++.|+|+.|+|.+.++......+..|++|.++||+++++..+....+.
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34445556666689998888999999999999999999999999999999999999998877665543
No 238
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.28 E-value=8.9e-06 Score=79.86 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
.++.....++..++.++.|+++|.+|||. ..+.+..+..++.++..-..+. -.++.+..+.|+
T Consensus 81 ~w~~~~~~l~~av~~~~~G~LSDlfGRr~--~~i~g~~l~vvG~Iv~atA~~~---------------~~~iag~~l~Gv 143 (599)
T PF06609_consen 81 SWFSTAWTLASAVSFPFVGRLSDLFGRRY--FFIIGSLLGVVGSIVCATAQNM---------------NTFIAGMVLYGV 143 (599)
T ss_pred hHHHHHHHHHHHHHHHhhHHHHHHhcchH--HHHHHHHHHHhHHHHhhcCCcH---------------HHHHHHHHHHHH
Confidence 57777778889999999999999999998 3444444444444443222221 266788999999
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
+.|... .....++|..|.+.|..+.++...
T Consensus 144 gaG~~~-~~~~~isEl~p~k~R~~~~~~~~~ 173 (599)
T PF06609_consen 144 GAGVQE-LAALAISELVPNKWRGLGLAIASI 173 (599)
T ss_pred hhHHHH-HHHHHHHHhcccchhhhHhHHHHH
Confidence 877554 455668999999999877765554
No 239
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.23 E-value=1.1e-05 Score=75.95 Aligned_cols=177 Identities=14% Similarity=0.143 Sum_probs=108.8
Q ss_pred hcchhHHHHHHHHHHhh-hhhhhhhhhhhccccC----CCccCCchhHHH---HHHHHHHHHHHHHHHHHhhc-CCCCcc
Q 012629 243 IASDEKIALLGAIQSLF-EGSMYTFVFLWTPALS----PNDEEIPHGFIF---ATFMLASMLGSSLASRLMAR-SPPRVE 313 (459)
Q Consensus 243 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr-~g~~~~ 313 (459)
.+++|+-+...+..=+. -+++|+ +...+..|+ .++++.+.+... ..+....-+..+++||++|| +|+|+
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYG-mraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~- 93 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYG-MRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR- 93 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhh-hHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-
Confidence 34555544443333333 344444 333333333 333456664333 33334445567899999999 58777
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh--hhhhhhh
Q 012629 314 SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNF 391 (459)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~ 391 (459)
.+..+..+..++..++...... .+ ..+.+++.+.++|.|..-|...+++.|.+|++. |-.++++
T Consensus 94 -tI~lGail~~iGh~~L~~~~~~-~~------------~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~ 159 (498)
T COG3104 94 -TIVLGAILMAIGHLVLAISSVS-GP------------GGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTL 159 (498)
T ss_pred -HHHHHHHHHHHHHHHHhccccc-cc------------cHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccE
Confidence 3667777777766665544201 01 266788888899999999999999999999876 4455554
Q ss_pred hhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHHHHHHHHhhhhccc
Q 012629 392 FRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQRRLMVIA 437 (459)
Q Consensus 392 ~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (459)
..++ .++.+.+++.+. .++...|..+++.+....+.+...+++.
T Consensus 160 fY~~iNiGsl~~p~i~~~~~~~--~g~~~gF~~aavGm~~gl~~f~~~~r~~ 209 (498)
T COG3104 160 FYMGINIGSLIAPIITGLLAIN--YGWHVGFGLAAVGMIIGLVIFLLGRRHV 209 (498)
T ss_pred EEEEeehHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHHccchh
Confidence 4443 333444444443 5688888888888888877766655443
No 240
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.23 E-value=2.2e-05 Score=76.66 Aligned_cols=152 Identities=18% Similarity=0.134 Sum_probs=111.3
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccC--cchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHH
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG--RKRACVTYCLTYILSC-ITKHSPQYKILMIGRIL 133 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~G--rr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l 133 (459)
.-++|...++.+.+..+.+.+.+...+...++.+..|+++|+.. ++.+..++++..+++. .+.+.++++.+...-.+
T Consensus 318 ~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~ 397 (509)
T KOG2504|consen 318 FVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSIL 397 (509)
T ss_pred HHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 55566777899999999999988888888899999999999988 4445555666666665 66899999999999999
Q ss_pred HHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHH
Q 012629 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (459)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~ 213 (459)
.|++.|........ ++.|...-.+..+ .++ ...+..+++.+++|++.+++.+..+ .|...|+..+...+++..
T Consensus 398 fG~~~g~~~~l~~~-i~~~~~g~~~l~~----a~G-l~l~~~gi~~l~gpPiag~~~d~tg-~Y~~~f~~~g~~~~~s~~ 470 (509)
T KOG2504|consen 398 FGFCVGSFSSLTPV-ILVDLVGLEKLSN----AYG-LLLLFQGIGALVGPPIAGLLYDITG-NYDHAFYFCGLCFLLSAV 470 (509)
T ss_pred HHHHHHHHHHHHHH-HHHHHcChhhcch----HHH-HHHHHhHHHHHcCcccceeeeeccC-CeeeehhhcChHHHHHHH
Confidence 99999988776533 5666522222222 233 3334566888999999998877665 366778887777766654
Q ss_pred HH
Q 012629 214 II 215 (459)
Q Consensus 214 ~~ 215 (459)
..
T Consensus 471 ~~ 472 (509)
T KOG2504|consen 471 LL 472 (509)
T ss_pred HH
Confidence 33
No 241
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.18 E-value=5.3e-05 Score=69.40 Aligned_cols=103 Identities=24% Similarity=0.317 Sum_probs=76.1
Q ss_pred hhhccchhhhhhhccCCCc--cchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCc--hHHH
Q 012629 53 DWLQGPYVYYLYSTYGFGK--GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQ--YKIL 127 (459)
Q Consensus 53 ~~~~~p~l~~~~~~~~~s~--~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~--~~~l 127 (459)
.....+..+....+++.+. .+.++..+.......+..++.|.++||+|||+.+..+......+. +.++.++ .+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (338)
T COG0477 18 LGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALL 97 (338)
T ss_pred cchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 3333555666667777665 367777777777666777899999999999988888877645543 4455555 8899
Q ss_pred HHHHHHHHhHhhhhhhhhhhhhhhhcccc
Q 012629 128 MIGRILGGIATSLLFSAFESWLVAEHNKR 156 (459)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~~~~~r 156 (459)
++.|+.+|++.+...+...+ ++.|..++
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~-~~~~~~~~ 125 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASA-LLSEWFPE 125 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHH-HHHHhcCc
Confidence 99999999999988888766 78877443
No 242
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.11 E-value=0.00031 Score=62.93 Aligned_cols=300 Identities=13% Similarity=0.071 Sum_probs=159.6
Q ss_pred hccCCCccchh----hHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhh
Q 012629 65 STYGFGKGEIG----QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATS 139 (459)
Q Consensus 65 ~~~~~s~~~~g----~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~ 139 (459)
.+.+++..|+. -+-.-.+....+ +.=.+.|-.--|++++.-.+...... +.-+.++.+.+=+.-+..|...+
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~Lv---pvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA 110 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLV---PVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA 110 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHH---HHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH
Confidence 45566666654 111222332222 34457898888888887766555554 55778899988888888888777
Q ss_pred hhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHH
Q 012629 140 LLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 140 ~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
....-. + ++-+. +++.+..+.-+. ....|...|..++.++.+. ..+.+...=.+......+...+..
T Consensus 111 aEIAYy-s-YIYs~Vd~~~Yqrvt~y~Ra----A~L~g~~~g~vlaQlLvs~----~~~sy~~LN~ISL~~~~ia~~~A~ 180 (433)
T KOG3810|consen 111 AEIAYY-S-YIYSKVDPEMYKRVTGYCRA----AFLVGKFVGSVLAQLLVSL----ETLSYTTLNYISLAEVTIAVLLAL 180 (433)
T ss_pred HHHhhh-h-eeeeecCHHHHHHHHHHhHH----HHHHHhHHHhHHHHHHhhh----cccchhhhchhhHHHHHHHHHHHh
Confidence 664332 3 44333 333333332222 3344444454444444332 333332221222222222222222
Q ss_pred hhccccCC------CCCc-----------hhhH-------HHHHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhcc
Q 012629 217 SSWTENYG------DPSE-----------SKDL-------LTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (459)
Q Consensus 217 ~~~~~~~~------~~~~-----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (459)
++|..++ ++++ +.+. .....++.++..+||+.+...+-..+...+.+- +.+|..
T Consensus 181 -fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~Q-V~nY~Q 258 (433)
T KOG3810|consen 181 -FLPRVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQ-VTNYTQ 258 (433)
T ss_pred -hCCCCchhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHH-HHHHHH
Confidence 3333221 0000 0000 111223444556677776666655555555444 444444
Q ss_pred ccCCCccCCch----hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcc
Q 012629 273 ALSPNDEEIPH----GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (459)
Q Consensus 273 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (459)
..-++....+. |..=++..+.+.++.+..|.+--++.|+....+..+.+..+..+.. ... ..++
T Consensus 259 ~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~----m~~-------t~~I- 326 (433)
T KOG3810|consen 259 ILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFI----MAQ-------TQHI- 326 (433)
T ss_pred HHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhh----hhc-------ccce-
Confidence 43333221111 5555666677888888889887666655432233332222222222 222 1222
Q ss_pred ccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
|+..++.+++...+....++...-+++...++.-|-.+|+..+
T Consensus 327 ---w~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 327 ---WVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred ---ehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHH
Confidence 5778899999999988888888888888899988988888544
No 243
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.04 E-value=5.2e-05 Score=75.18 Aligned_cols=129 Identities=16% Similarity=0.188 Sum_probs=91.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
+++.+...++..+++++.|+++|++|||+. +..+.....+..++....... +.+.++-++.|+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~--l~~~~~~~~iG~ii~~~a~~~---------------~~l~~GR~l~G~ 154 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKT--LLLAVVLFLIGAIIIALAPSW---------------YQLIVGRILTGL 154 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHH--HHHHHHHHHHHHHHHHHhhhH---------------HHHHHHHHHhcc
Confidence 688888889999999999999999999973 555655555555555544433 477889999999
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhhh--hhHHHHHhhhccCc---chhHHHHHHHHHHHHHHHHH
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCVVLYNVDA---FPITVMFGMCSIFLLVASVL 429 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~ 429 (459)
+.|........+.+|..|++.||...+..+.. .+..++........ +++...+....+..+...+.
T Consensus 155 g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 155 GVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred chhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998877764 33344433311111 24555555554444444333
No 244
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.04 E-value=0.00066 Score=62.85 Aligned_cols=171 Identities=20% Similarity=0.221 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHhhhhccchhhhhh-hccCCCccchhhHHHHHHHHhhhhhccccchhc-ccCcchhhHHHHHHHHHHH--
Q 012629 41 NYLLVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-KQGRKRACVTYCLTYILSC-- 116 (459)
Q Consensus 41 ~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~D-r~Grr~~~~~~~~~~~~~~-- 116 (459)
+++...++..++..++-+++.+.- +-||++..|...+....-....++-...|++.. |.++|+.-.+++....++.
T Consensus 212 ~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~l 291 (403)
T PF03209_consen 212 RFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFAL 291 (403)
T ss_pred HHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH
Confidence 344455666667777744443333 678999888765544433322233335676555 7888888888888777653
Q ss_pred --HHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcc-
Q 012629 117 --ITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV- 190 (459)
Q Consensus 117 --l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~- 190 (459)
+.+..++.+.+...-++.|++.|.......+ ...+. ++.+.+.+.+.. .+..+..+|..+|+.+-....
T Consensus 292 ii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals-~mM~lt~~~~aG~~mG~WGa----aQA~A~Glg~~~GG~~~D~~~~ 366 (403)
T PF03209_consen 292 IILAGPLGSPWLFRPGVFLLGLGNGLFTVGALS-LMMDLTSAGRAGLFMGAWGA----AQAIARGLGTFLGGALRDLVRA 366 (403)
T ss_pred HHHHHhcccchHHHHHHHHHHHhhhHHHHHHHH-HHHhCCCCcchhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 2356778899999999999999999887766 44444 445556664444 444445555554444333221
Q ss_pred --c-ccCCccccchhhHHHHHHHHHHHHH
Q 012629 191 --D-SFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 191 --~-~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
. ....+|...|.+-++..+++.++..
T Consensus 367 ~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 367 LFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred hccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1223455667777766666655554
No 245
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.04 E-value=1.8e-05 Score=74.76 Aligned_cols=155 Identities=17% Similarity=0.163 Sum_probs=111.6
Q ss_pred HhhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHH
Q 012629 51 AGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMI 129 (459)
Q Consensus 51 ~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~ 129 (459)
++.++...++.--.+|.+-.+...|......+..-.+.-++.+++.+|+|+-+++.+++....+=. ..+..+|.|+.+.
T Consensus 385 ~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLP 464 (618)
T KOG3762|consen 385 AGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLP 464 (618)
T ss_pred HHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheee
Confidence 344444555544458888777777855555544344444578999999999999999999988855 5688999999999
Q ss_pred HHHHHHhHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHH
Q 012629 130 GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (459)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~ 209 (459)
.-+++|+..+..+.+..+ |++...+++.....+.........+|-++|.++| +.+.+++ +-|..|...++.++
T Consensus 465 ieilqgit~aliWaa~~s-Y~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIG----G~~v~~f--g~~ttf~~~giAcl 537 (618)
T KOG3762|consen 465 IEILQGITHALIWAAIIS-YASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIG----GFVVERF--GARTTFRIFGIACL 537 (618)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhhCCCcchHHHHHHHHHHhcccCcchhhhhh----hhhheee--hhHHHHHHHHHHHH
Confidence 999999999999999877 9998888888877676666666666666666554 4544443 33566666555555
Q ss_pred HHH
Q 012629 210 IGM 212 (459)
Q Consensus 210 i~~ 212 (459)
+.+
T Consensus 538 ~~l 540 (618)
T KOG3762|consen 538 VTL 540 (618)
T ss_pred HHH
Confidence 443
No 246
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.03 E-value=0.0099 Score=57.42 Aligned_cols=55 Identities=11% Similarity=-0.130 Sum_probs=38.9
Q ss_pred hhhhhccCCC-----ccchhhHHHHHHHHhhhh-hccccchhcccCcchhhHHHHHHHHHH
Q 012629 61 YYLYSTYGFG-----KGEIGQLFIAGFGSSMLF-GTIVGSLADKQGRKRACVTYCLTYILS 115 (459)
Q Consensus 61 ~~~~~~~~~s-----~~~~g~~~~~~~~~~~l~-~~~~G~l~Dr~Grr~~~~~~~~~~~~~ 115 (459)
-++.|.+.++ ...+.++.....+...+. .++.+++++|++|++++-.....+..-
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~ 87 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGF 87 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHH
Confidence 3455666553 245677777776655555 678999999999999988876666553
No 247
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.99 E-value=0.00016 Score=69.83 Aligned_cols=131 Identities=21% Similarity=0.261 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
+.+++....+.+++.+..+++.||+|.|+ ++..+..+.++..++........ .+.+++.-++.|+
T Consensus 76 ~~i~ss~~~G~i~~~iP~g~l~~k~G~r~--v~~~~~~~sa~~t~l~P~aa~~~-------------~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 76 GLIFSSFFWGYILGQIPGGYLADKFGARR--VFFISGLISALLTLLTPLAASIG-------------FYLLLVLRFLQGL 140 (466)
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHcCchH--HHHHHHHHHHHHHHHHHHHHHhc-------------chhhHHHHHHhHH
Confidence 78999999999999999999999999998 35555555555544433333221 1245677899999
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHHHHHHHH
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVASVLQ 430 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (459)
+.+..+|.......+-.|+++|++..++...+ .+..+++.+-+. ..++...|.+.+...++..+++
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s-~~GW~sifY~~g~~g~i~~~~w 212 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES-SLGWPSIFYVFGIVGLIWFILW 212 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc-CCCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888766553 222334444333 2345555555555544444333
No 248
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.99 E-value=4.1e-05 Score=71.13 Aligned_cols=98 Identities=9% Similarity=0.006 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
+.+.....++.+.|++..|++.||+|||+. ......+..++.++..+ +... +......+++...=.+.|+
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v--YG~~liImIi~t~~~~~-s~~~-------~~~~~~m~~L~~~R~~LGi 156 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKV--YGKELIIMIICSALSGL-SVGT-------TSPLGVMMTLCFFRFLLGI 156 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhh--hhHHHHHHHHHHHHhcc-CCCC-------CCCcchhhHHHHHHHHhhc
Confidence 466667778999999999999999999982 32333333322222111 1110 1111112355566688899
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (459)
|.|.-+|...+.++|....+.||+-.+.
T Consensus 157 GIGGDYPlSAtI~SE~an~~~RGa~iaa 184 (538)
T KOG0252|consen 157 GIGGDYPLSATIMSESANKKTRGAFIAA 184 (538)
T ss_pred cccCCCcchHHHhhhhhhhccccceeEE
Confidence 9999999999999999999999976543
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.98 E-value=3.4e-05 Score=76.81 Aligned_cols=91 Identities=10% Similarity=0.036 Sum_probs=72.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
....+++.++.++|.++.|.++||+|||+ ++..+..+..+......+..+. +...+.-++.|+
T Consensus 121 ~~~~s~~~~G~~vG~~i~g~lsD~~GRk~--~~~~~~~~~~i~~~~~a~a~~~---------------~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 121 ALGQSLFFLGVLVGSLIFGPLSDRFGRKP--VLLVSLLLFIIFGILTAFAPNY---------------WMFLIFRFLSGF 183 (521)
T ss_pred HHHHHHHHHHHHHHHhhheehHhhcccHH--HHHHHHHHHHHHHHHHHHhCcH---------------HHHHHHHHHHHh
Confidence 56677888999999999999999999998 3555555555554444443333 467778899999
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (459)
+.+......+.+..|.++++.|+.+..+
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~ 211 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL 211 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH
Confidence 9999999999999999999999998877
No 250
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.96 E-value=0.00011 Score=70.08 Aligned_cols=134 Identities=13% Similarity=0.174 Sum_probs=83.7
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhh-hhhccccCCC-ccCC--c-hhHHHHHHHHHHHHHHHHHHHHhhcCC--CCcchhH
Q 012629 244 ASDEKIALLGAIQSLFEGSMYTFV-FLWTPALSPN-DEEI--P-HGFIFATFMLASMLGSSLASRLMARSP--PRVESYM 316 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~--~-~~~~~~~~~~~~~~~~~~~g~l~dr~g--~~~~~~l 316 (459)
..++|...++....+.....++.. ...-| |+++ ..+. + .|++.+...++..+++++.|++..|.+ +|+ +
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wp-Yl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P---l 105 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWP-YLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP---L 105 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecch-hhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccC---H
Confidence 345666666666665555544422 22222 3332 1222 2 288888899999999999999999988 555 6
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhh
Q 012629 317 QIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF 392 (459)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~ 392 (459)
..+..+..++.++........ .+. .++++++-++.|++.+ .....-.++++..-.+.|.++++..
T Consensus 106 i~s~ii~~~g~llY~~l~~~~-------~~~---~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~ 170 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVP-------NGV---KYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAAT 170 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-------cch---HHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHh
Confidence 777777777766654433331 111 2577788888888876 4566778888865555566555433
No 251
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.79 E-value=0.0035 Score=57.12 Aligned_cols=114 Identities=16% Similarity=0.141 Sum_probs=59.8
Q ss_pred hhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhc-----ccCcchhhHH------HHHHHHHHH-H---H---hh
Q 012629 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-----KQGRKRACVT------YCLTYILSC-I---T---KH 120 (459)
Q Consensus 59 ~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~D-----r~Grr~~~~~------~~~~~~~~~-l---~---~~ 120 (459)
.+|.+.+.-|.|.++.+....+.+-. -.-+.|.++.| |+||||..+. +.++..++. . . +-
T Consensus 52 ~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~ 129 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG 129 (510)
T ss_pred hhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence 66777888889988887653333221 22336999999 9999997554 333322221 1 0 11
Q ss_pred CCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc--cccccchhhHHHHHHHHHHHHHHHH
Q 012629 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLV 178 (459)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g 178 (459)
.++...+...-++.-+..+..-.+...|-+.-. ++-++... +.+.+...|..+|
T Consensus 130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST----~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 130 LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYAST----CQSVGQTAGYFLG 185 (510)
T ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhH----HHHHHHhhhHHhh
Confidence 223333333445555666666555555443333 33444333 4444444444333
No 252
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.79 E-value=4e-05 Score=54.04 Aligned_cols=76 Identities=14% Similarity=0.164 Sum_probs=64.4
Q ss_pred hhhhccchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHH
Q 012629 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKIL 127 (459)
Q Consensus 52 ~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l 127 (459)
+.....|.+|.+.+|.++|.++.|++.+..++...++.+...++.++..+++.+..+++...+.+ .+++.++++.+
T Consensus 7 gRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 7 GRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 33444899999999999999999999999998777888888899999888899999998888876 67888877654
No 253
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.73 E-value=0.00065 Score=54.76 Aligned_cols=76 Identities=20% Similarity=0.224 Sum_probs=61.5
Q ss_pred HHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhcc
Q 012629 78 FIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHN 154 (459)
Q Consensus 78 ~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~ 154 (459)
.++.+....+..++...+.+++|.|+.++++.+.+.+-...-+-++.+.++.+-.+.|++.+..+.+... ++.+..
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~-ylt~~s 118 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGT-YLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhH-HHHHcC
Confidence 3444555556666788899999999999999999987555556788899999999999999999998866 877773
No 254
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.71 E-value=0.0011 Score=58.13 Aligned_cols=126 Identities=20% Similarity=0.134 Sum_probs=71.9
Q ss_pred HHhhhhhhhhhhhhhccccCCCccCCchhHH---HHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHH
Q 012629 256 QSLFEGSMYTFVFLWTPALSPNDEEIPHGFI---FATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV 332 (459)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~ 332 (459)
.....+..|.+ ..|.|.+ ++.+|.+...+ .....++.-+ .+..|.+.||+|.+. .+.++.....++......
T Consensus 11 v~~~~Gt~Y~F-s~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~--~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 11 VQLCSGTTYTF-SAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWV--VLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred HHHhcCcccch-hhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHH--HHHHHHHHHHHHHHHHHH
Confidence 33444455553 5555554 45677766433 3444456554 488999999999776 355666555555554433
Q ss_pred hhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 333 TSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
...... + ....|.+.+..++.+.+.............+.+|+ +||++.|+.-..
T Consensus 86 ~~~~~i------~--~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~ 139 (250)
T PF06813_consen 86 AVSGRI------P--SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGF 139 (250)
T ss_pred HHhCcc------C--ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHH
Confidence 322210 1 11223445545555555444456666677788985 699998776543
No 255
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.70 E-value=0.0012 Score=60.71 Aligned_cols=129 Identities=14% Similarity=0.140 Sum_probs=87.9
Q ss_pred cchhhhhhhc-cCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHH
Q 012629 57 GPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILG 134 (459)
Q Consensus 57 ~p~l~~~~~~-~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~ 134 (459)
..+++...+| .|.+..+.+...+......+++..++-++..|+...|.+.+..+...+-+ ..+++++...+ .+-++.
T Consensus 256 gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~-~~l~~i 334 (422)
T COG0738 256 GSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL-YALFLI 334 (422)
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH-HHHHHH
Confidence 5555666666 78788777777777777677777778888889999998888876665544 55777875444 455788
Q ss_pred HhHhhhhhhhhhhhhhhhc-cccccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCC
Q 012629 135 GIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (459)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~ 195 (459)
|+..+..+|...+ +..+. .+.....+ +......+|..+-|.+.+++.++.+-
T Consensus 335 g~F~simfPTIfs-lal~~l~~~ts~~s--------~~l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 335 GLFNSIMFPTIFS-LALKNLGEHTSVGS--------GLLVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred HHHhHHHHHHHHH-HHHhccCccccccc--------eeeeeheecchHHHHHHHHHHHhhhh
Confidence 9999999999866 53332 22222111 22223447778888888888876654
No 256
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.62 E-value=1.7e-06 Score=84.44 Aligned_cols=98 Identities=13% Similarity=0.182 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
+...+...++.++|+++.|+++||+|||+. +..+..+..++.++..+.... .+ .+.+.++-++.|+
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~--~~~~~~~~~i~~~~~~~~~~~--------~~----~~~~~~~R~~~G~ 114 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRKPA--LIISALLMIIGSILIAFAPSY--------NN----FWMLLIGRFLIGF 114 (451)
T ss_pred HHHHHHHHhhhccccccccccccccccccc--ccccccccccccccccccccc--------cc----ccccccccccccc
Confidence 567778889999999999999999999983 555555544444444333311 01 1366777888999
Q ss_pred hhcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
+.|...+....++.|..|++.|+...++.+..
T Consensus 115 ~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~ 146 (451)
T PF00083_consen 115 GIGGAYVVSPIYISEIAPPKHRGFLSSLFQLF 146 (451)
T ss_pred cccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999888776663
No 257
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.59 E-value=0.0069 Score=55.30 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHh
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (459)
+.++......+.+...+.|.++||+|||+ ..+...+.-...++.-..... ..++++-++-|+
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~---~cl~~cily~~scl~k~~~~~---------------~~L~~GRvlgGi 133 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKK---ACLLFCILYSLSCLTKHSSNY---------------PVLLLGRVLGGI 133 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchH---HHHHHHHHHHHHHHHHhcccc---------------HHHHHHHHHHHH
Confidence 56666666778888899999999999998 333333333222222111111 367778888888
Q ss_pred hhcchhhHHHHHH-hcc----CChhhhhhhhh
Q 012629 364 CVGIFWPSIMKMR-SQY----IPEEARSTIMN 390 (459)
Q Consensus 364 ~~~~~~~~~~~~~-~~~----~p~~~r~~~~g 390 (459)
+..+.+...-++. .|+ +|++..+..++
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~ 165 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFS 165 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 8888777666654 333 45555454444
No 258
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.49 E-value=0.0033 Score=61.15 Aligned_cols=128 Identities=12% Similarity=0.060 Sum_probs=87.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHH-HhhhccCCCCCCCCCccccchhHHHHHHHHH
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI-VTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (459)
+...+++.++.+++.+.++.+.||++-.+ .+....+....+.... ...+. +.+++.-++.|
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~ls~---~l~~~~~~w~~~~~~~~~~~s~---------------~~~ialr~llG 145 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFPLSK---GLSVSGILWGLFGFLTAAVHSF---------------PGLIALRFLLG 145 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCChHH---HHHHHHHHHHHHHHHHHHHhhh---------------HHHHHHHHHHH
Confidence 77888889999999999999999997433 2222222222222222 22222 36677789999
Q ss_pred hhhcchhhHHHHHHhccCChhhhhhhhhhhhhh--hhHHHHHhhhc--------cCcchhHHHHHHHHHHHHHHHHH
Q 012629 363 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP--LNIFVCVVLYN--------VDAFPITVMFGMCSIFLLVASVL 429 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~~~~~l~~--------~~~~~~~~~~~~~~~~~~~~~~~ 429 (459)
+..+..+|....++...+.+++|+.-+|+.+.. .+.+.|+++.. ....++.+.|++.+++.+...++
T Consensus 146 l~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 146 LFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred HHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHhe
Confidence 999999999999999999999999999888763 33334433321 22347778888777766654433
No 259
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.32 E-value=0.011 Score=55.94 Aligned_cols=106 Identities=14% Similarity=0.274 Sum_probs=67.7
Q ss_pred hhhHHHHHHHHHHH-H--H-hhCCch------HHHHHHHHHHHhHhhhhhhhhhhhhhhhc-ccc--ccchhhHHHHHHH
Q 012629 103 RACVTYCLTYILSC-I--T-KHSPQY------KILMIGRILGGIATSLLFSAFESWLVAEH-NKR--GFEQQWLSITFSK 169 (459)
Q Consensus 103 ~~~~~~~~~~~~~~-l--~-~~~~~~------~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r--~~~~~~~~~~~~~ 169 (459)
|+++++.++..+|. + . +.-++. +.++++-.+.++|.|+.-|...+ +..|. +++ .++.+ .++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~-~~~dq~~~~~~~~~~~----~F~- 75 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISP-FGADQYDEDDDSRRDS----FFN- 75 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHH-HHHHCSSTTTTTHHHH----HHH-
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHH-HHHHHhcccchhhhhh----hHH-
Confidence 56777888888774 3 2 333333 57899999999999999999877 77776 332 33333 222
Q ss_pred HHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHH
Q 012629 170 AIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 170 ~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
....+..+|..++..+..++-++. +|...|.+.++..+++.....
T Consensus 76 ~fY~~in~G~~~~~~~~~~i~~~~--~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTLVPYIQQNY--GWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHCS---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHhhcccchhhcccc--chhhhhhHHHHHHHHHHHHHH
Confidence 233345566666666666665444 555678888777776665554
No 260
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.21 E-value=0.0014 Score=59.42 Aligned_cols=115 Identities=13% Similarity=0.115 Sum_probs=64.2
Q ss_pred hhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhh--CCchH--HHHHHHHHHHhHhhhhhhhhhhhhhhhc---ccc
Q 012629 85 SMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKH--SPQYK--ILMIGRILGGIATSLLFSAFESWLVAEH---NKR 156 (459)
Q Consensus 85 ~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~--~~~~~--~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r 156 (459)
...+.++.+++.||+|||+++..+.+++++.+ +.-. .+|.. .+..+|+. ..+.+.+... |..|. .-|
T Consensus 394 efPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~araf----isg~fqvaYv-YtPEVyPTavR 468 (528)
T KOG0253|consen 394 EFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAF----ISGAFQVAYV-YTPEVYPTAVR 468 (528)
T ss_pred hCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH----HhchheEEEE-ecCcccchhhh
Confidence 45555689999999999999999999998864 3333 33332 33445544 3344444433 66665 333
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhhhhhhcccccCCccccchhhHHHHHHHHHHHHH
Q 012629 157 GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
+...+ .... .+-+|.++.|+++-. .+ -.--.+..+.+.+.+++.+...
T Consensus 469 atgvG-------tcSs-maRIggI~~p~iA~~-~e---~s~sl~i~vy~~~~ilagIavc 516 (528)
T KOG0253|consen 469 ATGVG-------TCSS-MARIGGIFSPVIAMR-AE---LSTSLPIFVYGALFILAGIAVC 516 (528)
T ss_pred hcchh-------hhhh-HHhhhhhhhhHHHHH-hc---cceeehHHHHHHHHHHHHHHhe
Confidence 33222 1222 234677777777622 11 1222445555555555544444
No 261
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.90 E-value=0.018 Score=54.03 Aligned_cols=150 Identities=13% Similarity=0.083 Sum_probs=79.0
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhccc--cCCCccCCch--hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHH
Q 012629 246 DEKIALLGAIQSLFEGSMYTFVFLWTPA--LSPNDEEIPH--GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (459)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~ 321 (459)
.++.|...+...+.+...-.....|.|. +.++-++.+. -+...++.+..++..+.+-|+.||+|-|.. +.++..
T Consensus 40 y~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a--~llgt~ 117 (480)
T KOG2563|consen 40 YPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTA--LLLGTV 117 (480)
T ss_pred chhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHH--HHHHHH
Confidence 3455555445444444332222233333 2223333221 355667778899999999999999998873 445555
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh--hhHH
Q 012629 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP--LNIF 399 (459)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~--~~~~ 399 (459)
...++..+=......+-+ +..+. .+...+..+.+...-.......-...--+|+++|+++..+..++ .|..
T Consensus 118 ln~iGa~Ir~iss~p~v~-----~~f~~--~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGva 190 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVP-----PLFRR--PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVA 190 (480)
T ss_pred HHHHHHHHhhhccCcccc-----ccchh--hhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHH
Confidence 444444443322222100 11110 14445555555544433333333445558999999998776664 5555
Q ss_pred HHHhh
Q 012629 400 VCVVL 404 (459)
Q Consensus 400 ~~~~l 404 (459)
++..+
T Consensus 191 vg~ll 195 (480)
T KOG2563|consen 191 VGFLL 195 (480)
T ss_pred HHhhc
Confidence 55544
No 262
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.89 E-value=0.17 Score=47.40 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchh
Q 012629 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (459)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (459)
+.+...+|.....++.++- ||. +.+....-.+ ..+.+......+. +..-...++.+....++|+..|=..
T Consensus 292 fN~~d~vG~~~a~~~~~~~-~r~---l~i~v~lR~l--fiPlF~~cn~~~~----~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWPD-PRK---LTIPVLLRLL--FIPLFLLCNYPPL----PVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred hHHHHHhhhhhhhcccCCC-Cce---ehHHHHHHHH--HHHHHHHhccCCC----CceecCchHHHHHHHHHHhccchHh
Confidence 6677888877766665543 333 2333222222 2222221111000 0001111466778888899988777
Q ss_pred hHHHHHHhccCChhhhhhhhhhhhh
Q 012629 370 PSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
...+.+..+.+|++++-.+-.+..+
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~ 386 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVF 386 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHH
Confidence 8888999999988886665544443
No 263
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.79 E-value=0.11 Score=46.76 Aligned_cols=90 Identities=20% Similarity=0.237 Sum_probs=66.7
Q ss_pred cccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-----ccc---------
Q 012629 91 IVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-----NKR--------- 156 (459)
Q Consensus 91 ~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-----~~r--------- 156 (459)
+.+.+.+++|-|+++.++...+......=+-+.+..++......|++.+..+..-.+ |+++. +.|
T Consensus 77 ~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~Skgt-YlT~~g~~ya~~~~~q~~~~~~ 155 (390)
T KOG3097|consen 77 FMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGT-YLTPMGQNYANQRGEQAGDGMK 155 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcc-eecHHHHHHHHhhhhhccCcee
Confidence 455889999999999999888877655555678889999999999999999887656 75554 334
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHH
Q 012629 157 GFEQQWLSITFSKAIFLGNGLVAIL 181 (459)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~~~g~~~ 181 (459)
.+..+.....+......|+.+...+
T Consensus 156 ~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 156 VRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred eeehhHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666555544
No 264
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.78 E-value=0.15 Score=50.76 Aligned_cols=152 Identities=17% Similarity=0.129 Sum_probs=89.4
Q ss_pred cchhhhhhhccCCCccchhhHHHHHHHHhhhhhccccchhccc-CcchhhHHHHHHHHHHH-H---HhhCC---------
Q 012629 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSC-I---TKHSP--------- 122 (459)
Q Consensus 57 ~p~l~~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~-l---~~~~~--------- 122 (459)
.+.+..+.++++.+...+.-..........+....++.++|.| ||-+++.++.++..++. + .+..+
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 4555566688888776665554555554556666899999975 89999998877776552 1 11111
Q ss_pred ----------c---hHHHHHHHHHHHhHhhhhhhhhhhhhhhhc-c---cc--ccchhhHHHHHHHHHHHHHHHHHHHhh
Q 012629 123 ----------Q---YKILMIGRILGGIATSLLFSAFESWLVAEH-N---KR--GFEQQWLSITFSKAIFLGNGLVAILSG 183 (459)
Q Consensus 123 ----------~---~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~---~r--~~~~~~~~~~~~~~~~~g~~~g~~~~~ 183 (459)
+ ...++.+.-+..+|.|+.-|...+ +-+|- + ++ ...... ++ ........|..++.
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~-fGadQfd~~~~~~~~~~~~f----Fn-W~yf~~~~g~l~a~ 211 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLA-FGADQFDELDPVEVKGIPSF----FN-WFYFSQNGGALLAQ 211 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchh-hcccccCccCcchhhCcccc----hh-HHHHHHHHHHHHHH
Confidence 0 125666777778889998888755 64443 2 11 111121 22 22334456666665
Q ss_pred hhhhhcccccCCccccchhhHHHHHHHHHHHHH
Q 012629 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (459)
Q Consensus 184 ~l~~~l~~~~~~~w~~~f~~~~~~~~i~~~~~~ 216 (459)
.+..+.-+..+|. .-|.+..+...++.++..
T Consensus 212 t~~vyiq~~~~w~--lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 212 TVLVYIQDNVGWK--LGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHHHhhhhcccce--eeccHHHHHHHHHHHHHH
Confidence 5555554445554 557777666665554443
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.73 E-value=0.61 Score=45.05 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhh
Q 012629 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (459)
Q Consensus 285 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 364 (459)
..+..++++..+|+.+..+.. .-++|. +.+.+....=.+ .++.+......+..+ .+..-...+..++..+++|+.
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~-~~l~i~s~~R~i--FIPlf~lcn~~~~~~-~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDS-RWLPILSFLRVL--FIPLFLLCNYPQRSR-LPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCc-cchHHHHHHHHH--HHHHHHHhcCCcccc-CCeeecccHHHHHHHHHHHHh
Confidence 556677788999988664432 112221 113322222222 222222222111100 010111224667778999999
Q ss_pred hcchhhHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 365 VGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 365 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
.|-.....+.+..+.+++++|..+-.+..+.
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~ 416 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIF 416 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 9988888999999999988887776665553
No 266
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.22 E-value=0.023 Score=39.67 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=36.1
Q ss_pred hhhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 012629 267 VFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRV 312 (459)
Q Consensus 267 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (459)
..-+.|.|.++ .|.+. |.+.++..+..+++.++.|+++||+++++
T Consensus 19 ~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 19 LYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 45677777774 45544 77777888889999999999999999887
No 267
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.22 E-value=0.11 Score=50.25 Aligned_cols=116 Identities=13% Similarity=0.138 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchh
Q 012629 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (459)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (459)
.++..++.+...|.++||+|||.. +........+-.....+.. . +.++ ..-...+.+...
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~--L~~~~~~~~l~~~~~~~~~-~----------------~~~~-~~~l~g~~~~~~ 130 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVV--LLLPLFGTILPALCLLFQG-Y----------------WFFL-LLGLSGGFSAIF 130 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhh--HHHHHHHHHHhHHHHHHHH-H----------------HHhh-hcccccchhhhh
Confidence 357788899999999999999873 2222222222111111111 1 2222 222223445566
Q ss_pred hHHHHHHhccCChhhhhhhhhhhhhh------hhHHHHHhhhccCcchhHHHHHHHHHHHHHHH
Q 012629 370 PSIMKMRSQYIPEEARSTIMNFFRIP------LNIFVCVVLYNVDAFPITVMFGMCSIFLLVAS 427 (459)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 427 (459)
....++++|...++.|...+|+.+.. .++..+...... .+....+.+..+..+...
T Consensus 131 s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~--~~~a~~f~ia~~~~~~~~ 192 (463)
T KOG2816|consen 131 SVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF--LGIALVFLIAAASGILSL 192 (463)
T ss_pred hhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh--cCchHHHHHHHHHHHHHH
Confidence 78899999999999999999887763 233333333333 345555555544444433
No 268
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.17 E-value=0.062 Score=54.57 Aligned_cols=152 Identities=18% Similarity=0.228 Sum_probs=83.1
Q ss_pred cccCCCccCCchh---HHHHHHHHHHHHHHHHHHHHhhc-CCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q 012629 272 PALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGI 347 (459)
Q Consensus 272 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (459)
..|+.+.++.+.. .++..+....-+..+++|+++|+ +|+++ .+..+..+..++..++.+..... ..+
T Consensus 11 vlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~--tIl~~~ii~~lG~~llai~a~~~------~~~- 81 (654)
T TIGR00926 11 VLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFK--TILYLSIVYVVGHALLSFGAIPS------SGH- 81 (654)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH--HHHHHHHHHHHHHHHHHhccCcc------ccc-
Confidence 3344444555443 33333444455567789999996 67666 35555555555554443321110 000
Q ss_pred cccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh---hhhhhhhhhhhhhH--HHH----Hhhh-ccC----cchhH
Q 012629 348 SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA---RSTIMNFFRIPLNI--FVC----VVLY-NVD----AFPIT 413 (459)
Q Consensus 348 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~---r~~~~g~~~~~~~~--~~~----~~l~-~~~----~~~~~ 413 (459)
.......++++.+..+|.|..-|...+...|.++++. |.+.+.++....+. +++ ..+. ... ..++.
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~ 161 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYP 161 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchH
Confidence 0011235677888889999989999999999987654 34444444433222 222 2222 111 12467
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 012629 414 VMFGMCSIFLLVASVLQRR 432 (459)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~ 432 (459)
..+.++++.++++.+....
T Consensus 162 ~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 162 LAFGVPAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777777777766655544
No 269
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.74 E-value=2.1 Score=41.37 Aligned_cols=42 Identities=12% Similarity=0.144 Sum_probs=31.1
Q ss_pred HHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhhhh
Q 012629 356 LGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 397 (459)
Q Consensus 356 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 397 (459)
+..++..+.....+....+.-+++.++..-|+.+.+.|+..|
T Consensus 410 ~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSN 451 (544)
T PF13000_consen 410 IQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSN 451 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHh
Confidence 334455555566667888899999999999999988777543
No 270
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.51 E-value=2.5 Score=41.44 Aligned_cols=77 Identities=10% Similarity=0.081 Sum_probs=42.8
Q ss_pred HHHhhhHHhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCc----h--hHHHHHHHHHHHHHHHHHHHHhhcC
Q 012629 235 QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP----H--GFIFATFMLASMLGSSLASRLMARS 308 (459)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~g~l~dr~ 308 (459)
...+..+.+.++|.+..++....+.+......-..|-. ..++.+..+ . |......++..++..++++.+.+|+
T Consensus 268 s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~-~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~ 346 (491)
T PF03219_consen 268 SLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKS-QLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF 346 (491)
T ss_pred cHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566777888887776665555444433321111211 112212111 1 4445555666667778889999999
Q ss_pred CCCc
Q 012629 309 PPRV 312 (459)
Q Consensus 309 g~~~ 312 (459)
|-+.
T Consensus 347 GW~~ 350 (491)
T PF03219_consen 347 GWRT 350 (491)
T ss_pred hHHH
Confidence 8765
No 271
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.47 E-value=0.0032 Score=62.33 Aligned_cols=124 Identities=14% Similarity=0.141 Sum_probs=2.9
Q ss_pred CCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCC---C--------
Q 012629 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS---N-------- 341 (459)
Q Consensus 276 ~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~-------- 341 (459)
+++++.+. |.+.+..-++.++..++..++.+|.. |+ +.+..+..+.+++.++..+-+....+. +
T Consensus 30 ErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~h-rp-rwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~ 107 (539)
T PF03137_consen 30 ERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGH-RP-RWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNS 107 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-Cc-ceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccc
Confidence 45666644 77777788888888888888888743 33 246666666665555433221111000 0
Q ss_pred ------C------------------CCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhhh--
Q 012629 342 ------V------------------KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP-- 395 (459)
Q Consensus 342 ------~------------------~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-- 395 (459)
+ .........++++++.++.|+|....++...+|+-|.++++..+...|+....
T Consensus 108 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~ 187 (539)
T PF03137_consen 108 SISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSI 187 (539)
T ss_dssp --------------------------------------------SSS---------------------------------
T ss_pred ccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhh
Confidence 0 01111223457788899999999999999999999999999988777776652
Q ss_pred hhHHHH
Q 012629 396 LNIFVC 401 (459)
Q Consensus 396 ~~~~~~ 401 (459)
.|+.+|
T Consensus 188 lGPa~G 193 (539)
T PF03137_consen 188 LGPALG 193 (539)
T ss_dssp ------
T ss_pred ccHHHH
Confidence 444443
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.14 E-value=0.18 Score=48.89 Aligned_cols=107 Identities=15% Similarity=0.088 Sum_probs=63.7
Q ss_pred cCCCccCCchhHHHHHHHHHHHH--HHHHHHHHhhcC---CCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcc
Q 012629 274 LSPNDEEIPHGFIFATFMLASML--GSSLASRLMARS---PPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (459)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~l~dr~---g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (459)
++++.++.+++.......+..+. ..++.|.++|-+ |.||...+.++..+..+........... ..+.
T Consensus 15 ~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~-------~~s~- 86 (433)
T PF03092_consen 15 FLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS-------ESSA- 86 (433)
T ss_pred HHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc-------cchh-
Confidence 55677888887666666665543 458999999976 4455445666655554444443333321 1111
Q ss_pred ccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh--hhhhhhh
Q 012629 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNF 391 (459)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~ 391 (459)
....+.+++..++.........+...|...++. ++...+.
T Consensus 87 ---~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~ 128 (433)
T PF03092_consen 87 ---AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSF 128 (433)
T ss_pred ---hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHH
Confidence 144555666677777777888888888874443 4444433
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.02 E-value=2 Score=40.70 Aligned_cols=134 Identities=6% Similarity=-0.030 Sum_probs=70.2
Q ss_pred hccccCCCc-cCCch----hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 012629 270 WTPALSPND-EEIPH----GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKS 344 (459)
Q Consensus 270 ~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (459)
+...|+.+. .+.+. ..++-...-+.+..-+....+.|..+.|+ +++...+...+...+ ......
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykp--viil~~~~~i~t~~l-ll~~~s-------- 93 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKP--VIILQALSYIITWLL-LLFGTS-------- 93 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHH-HHHHCc--------
Confidence 333444433 45543 23333333456666777888999998887 243333333333333 333322
Q ss_pred CCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh------hhhHHHHHhhhccCcchhHHHHHH
Q 012629 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI------PLNIFVCVVLYNVDAFPITVMFGM 418 (459)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~------~~~~~~~~~l~~~~~~~~~~~~~~ 418 (459)
.+.+-+..+.+|...+ .-...++++-..+|+++--++.+..+. ..+.++|..+....+.++.....+
T Consensus 94 ------v~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~i 166 (412)
T PF01770_consen 94 ------VLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYI 166 (412)
T ss_pred ------HHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 1244455566665554 346677888888888774444433333 244566666655555555554444
Q ss_pred HHH
Q 012629 419 CSI 421 (459)
Q Consensus 419 ~~~ 421 (459)
...
T Consensus 167 sl~ 169 (412)
T PF01770_consen 167 SLA 169 (412)
T ss_pred HHH
Confidence 333
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.90 E-value=0.34 Score=39.19 Aligned_cols=88 Identities=10% Similarity=0.086 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcc
Q 012629 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (459)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (459)
++.-....+.+++.+.+.+++|.|+. +.++.....+-... .+.... +.++.+..+.|++.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~s--m~lg~~~y~~y~~~-~~~~~~---------------~~l~~~s~l~G~~~a~ 105 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWS--MILGSLGYAIYIAS-FFYPNS---------------YTLYPASALLGFGAAL 105 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHH--HHHHHHHHHHHHHH-HHhhhH---------------HHHHHHHHHHhhhhHH
Confidence 33444556667778888999998873 44444433322222 122212 4677888999999999
Q ss_pred hhhHHHHHHhccCChhhhhhhhhhhh
Q 012629 368 FWPSIMKMRSQYIPEEARSTIMNFFR 393 (459)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (459)
.+...-.++.+...++.+++..++.-
T Consensus 106 lW~aqg~ylt~~s~~~~~~~~~~ifw 131 (156)
T PF05978_consen 106 LWTAQGTYLTSYSTEETIGRNTGIFW 131 (156)
T ss_pred hhHhhhHHHHHcCCHHHHhhHHHHHH
Confidence 99999999999999988888776543
No 275
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.58 E-value=4.4 Score=39.53 Aligned_cols=41 Identities=10% Similarity=0.087 Sum_probs=29.1
Q ss_pred HHHHHHHHhhhcchhh-HHHHHHhccCChhhhhhhhhhhhhh
Q 012629 355 LLGFCTFEACVGIFWP-SIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 355 ~~~~~l~g~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
.+..+...+......+ ..+.+++|....++..+-+++...+
T Consensus 132 ~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~g 173 (472)
T TIGR00769 132 ALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLG 173 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3444444444444445 8899999999999988888777764
No 276
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=92.98 E-value=2.9 Score=39.62 Aligned_cols=85 Identities=18% Similarity=0.289 Sum_probs=53.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHH
Q 012629 281 IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360 (459)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (459)
.+.+.+.....+-.++..++..++.+|+..+.. ......+...++++..+.... +.-+++.++
T Consensus 59 ~~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~R--i~~~~~l~~~g~l~va~~~~v---------------~~~l~Gv~l 121 (402)
T PF02487_consen 59 VSTGAVLLADILPSLLVKLIAPFFIHRVPYWIR--ILICVALSAAGMLLVAFSPSV---------------WVRLLGVVL 121 (402)
T ss_pred ccchHHHHHHHHHHHHHHHHhHhhhhhccchHH--HHHHHHHHHHHHhheeeccch---------------hHHHHHHHH
Confidence 345666666667788888889999998864431 334444444444443332221 356788888
Q ss_pred HHhhhcchhhHHHHHHhccCChh
Q 012629 361 FEACVGIFWPSIMKMRSQYIPEE 383 (459)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~p~~ 383 (459)
.+++.|..-.....+.. .+|+.
T Consensus 122 as~ssg~GE~tfL~lt~-~y~~~ 143 (402)
T PF02487_consen 122 ASLSSGLGEVTFLSLTH-FYGKS 143 (402)
T ss_pred HhhhhhhhHHHHHHHHH-hcCcc
Confidence 88888877777777655 55554
No 277
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.65 E-value=0.36 Score=45.75 Aligned_cols=144 Identities=14% Similarity=0.110 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhccccCCCccCCc---hhHHHHHHHHHHHHHHHHHHHHhhc----CCCCcchhHHHHH
Q 012629 248 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMAR----SPPRVESYMQIVF 320 (459)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~l~~~~ 320 (459)
+.+.........+++.- .-..+.|.|.++ .|.+ .+..+....+.+++.+++.|..+|| +||||. .+....
T Consensus 33 ~li~v~~ia~Gvqf~wA-~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP-fI~~~s 109 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWA-LELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP-FILAGS 109 (498)
T ss_pred HHHHHHHHHHHHHHHHH-HHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccc-hHHHhh
Confidence 33444444444444432 235566666653 2222 2566666668889999999999996 688874 344444
Q ss_pred HHHHHHHHHHHHhhhccCC-CCCCCC-CccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhh-hhhhhhh
Q 012629 321 VVSSVSLLLPIVTSFLVAP-SNVKSG-GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARST-IMNFFRI 394 (459)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~-~~g~~~~ 394 (459)
...++.+.+..+....... -+++.. .-.......+++..+.-+.........-++..|...++++-+ +++....
T Consensus 110 ~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~ 186 (498)
T KOG0637|consen 110 LLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSF 186 (498)
T ss_pred HHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHH
Confidence 4555555544433221100 000011 111222345566666677777778888999999987777666 6665554
No 278
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=92.08 E-value=3.5 Score=37.19 Aligned_cols=73 Identities=15% Similarity=0.137 Sum_probs=42.4
Q ss_pred hhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH-HHhhCCchHHHHHHHHHHHhHhhhhhhhhhh
Q 012629 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC-ITKHSPQYKILMIGRILGGIATSLLFSAFES 147 (459)
Q Consensus 75 g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~-l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (459)
|.+...-.+...+.-...-...||+.--.=..+..++.+.+. +.+++++.++=+.+-.+..++.|..-....+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ 138 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLA 138 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhh
Confidence 333333334444444456667887643222233334445555 5589999988888877777777766555433
No 279
>PRK03612 spermidine synthase; Provisional
Probab=91.80 E-value=5.3 Score=39.70 Aligned_cols=86 Identities=10% Similarity=-0.022 Sum_probs=40.8
Q ss_pred hccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHH--H-HHHH-HH----hhCCch-HHHHHHHHHHH
Q 012629 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT--Y-ILSC-IT----KHSPQY-KILMIGRILGG 135 (459)
Q Consensus 65 ~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~--~-~~~~-l~----~~~~~~-~~l~~~r~l~G 135 (459)
.-+|-+..+.+.+.++......+++...|++.++--++.. ..-..+ . .++. +. ++...+ ..++..-++.+
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457666666666666666555665566655533222221 111111 1 1111 11 111111 12334455677
Q ss_pred hHhhhhhhhhhhhhhhh
Q 012629 136 IATSLLFSAFESWLVAE 152 (459)
Q Consensus 136 ~~~~~~~~~~~~~~i~~ 152 (459)
+..|...|.... +..+
T Consensus 122 ~l~G~~~Pl~~~-~~~~ 137 (521)
T PRK03612 122 LLIGMEIPLLMR-ILQR 137 (521)
T ss_pred HHHHHHHHHHHH-HHHh
Confidence 888888887655 4443
No 280
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=90.36 E-value=3.8 Score=38.80 Aligned_cols=113 Identities=18% Similarity=0.224 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhh---hhhhhhhh
Q 012629 316 MQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA---RSTIMNFF 392 (459)
Q Consensus 316 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~---r~~~~g~~ 392 (459)
+..+..+..++..++.+....... +.......+.+++.+.++|.|..-|...+...|.++++. |.+.+..+
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~~------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~f 77 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPSL------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWF 77 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSSC------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcchh------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHH
Confidence 455555555555554443332111 001112377888999999999999999999999999874 44555555
Q ss_pred hhhhhH--HHHHhh--hccCcchhHHHHHHHHHHHHHHHHHHhhhh
Q 012629 393 RIPLNI--FVCVVL--YNVDAFPITVMFGMCSIFLLVASVLQRRLM 434 (459)
Q Consensus 393 ~~~~~~--~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (459)
..+.|. .++... ......++...|.++.+..+++...+...+
T Consensus 78 Y~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 78 YWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 554332 333222 112336778888888877777766655443
No 281
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=90.23 E-value=1.7 Score=39.21 Aligned_cols=97 Identities=22% Similarity=0.252 Sum_probs=59.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHH
Q 012629 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (459)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (459)
.+.......+...++.+..|++.||.|||+ .+...............+... ...+.........|
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g 105 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRK--VLIIGLLLFLLGTLLLALAPN-------------VGLALLLILRLLQG 105 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchH--HHHHHHHHHHHHHHHHHhCcc-------------chHHHHHHHHHHHH
Confidence 466777777778888899999999998885 233333221222112111111 00124444455577
Q ss_pred hhhcchhhHHHHHHhccCCh-hhhhhhhhhhhh
Q 012629 363 ACVGIFWPSIMKMRSQYIPE-EARSTIMNFFRI 394 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~-~~r~~~~g~~~~ 394 (459)
++.+...+...++..|..|+ +.|+...+....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 78887889999999999997 556665544433
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.62 E-value=17 Score=35.22 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=56.3
Q ss_pred ccCCCccchhhHHHHHHHHhh-hhhccccch---hcccCcchhhHHHHHHHHHHH-HHh--h---C-------------C
Q 012629 66 TYGFGKGEIGQLFIAGFGSSM-LFGTIVGSL---ADKQGRKRACVTYCLTYILSC-ITK--H---S-------------P 122 (459)
Q Consensus 66 ~~~~s~~~~g~~~~~~~~~~~-l~~~~~G~l---~Dr~Grr~~~~~~~~~~~~~~-l~~--~---~-------------~ 122 (459)
..+.+...+-.+.+.....+. +++.+.+.+ .+|+||++.+.++..+..++. +.- . + +
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~ 351 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTP 351 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccccc
Confidence 344444444444444333333 334444444 457899999999988777654 221 1 2 1
Q ss_pred chHHHHHHHHHHHhHhhhhhhhhhhhhhhhc--cccccchh
Q 012629 123 QYKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQ 161 (459)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~ 161 (459)
++....+.-++.|++.+........ ++.+. ++|....+
T Consensus 352 ~~~~~~ii~~l~G~~D~~~~t~~~~-ii~~~~~~~~~~~fs 391 (461)
T KOG3098|consen 352 SYYLALIIGFLLGFGDACFNTQRYV-IIALLYPDDRAQAFS 391 (461)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHH-HHHHHhcCchHHHHH
Confidence 3456677889999999988777644 66665 44444444
No 283
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=89.30 E-value=4.3 Score=35.66 Aligned_cols=64 Identities=8% Similarity=-0.016 Sum_probs=33.4
Q ss_pred ccccchhhHHHHHHHHHHHHHhhcccc-CCCCCch---hhHHHHHHhhhHHhcchhHHHHHHHHHHhh
Q 012629 196 GPVAPFDAAACFLAIGMVIILSSWTEN-YGDPSES---KDLLTQFRGAAVAIASDEKIALLGAIQSLF 259 (459)
Q Consensus 196 ~w~~~f~~~~~~~~i~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (459)
.|+..+.+.+.+.++.+++....-.|- ...++++ ++...+..+...+.+|++..|...+.+...
T Consensus 39 ~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~w 106 (267)
T PF07672_consen 39 NWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTLSKKPSYKSILKEKETWKWILIYGIW 106 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccccccchHHHHHccchHHHHHHHHHHH
Confidence 477777777776666555544332221 1111111 111111234666788889888877666544
No 284
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.29 E-value=0.88 Score=46.24 Aligned_cols=161 Identities=15% Similarity=0.146 Sum_probs=95.1
Q ss_pred CCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhcc---------------
Q 012629 276 PNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLV--------------- 337 (459)
Q Consensus 276 ~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------------- 337 (459)
++.++.+. |.+...+-++..+......+...|.-|.+ .+..+..+.++..++..+-+...
T Consensus 124 ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr--~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~ 201 (735)
T KOG3626|consen 124 ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPR--WIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVE 201 (735)
T ss_pred hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccc--eeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcccc
Confidence 44555543 66666666777777777788877764433 35555555555544433321100
Q ss_pred CC--------------------CCCC-CCCccc-cchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh-
Q 012629 338 AP--------------------SNVK-SGGISF-SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI- 394 (459)
Q Consensus 338 ~~--------------------~~~~-~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~- 394 (459)
.+ .+.. ...... ...+++.+.++.|+|....++...+|+-|.+.++......|+...
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~ 281 (735)
T KOG3626|consen 202 NPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSM 281 (735)
T ss_pred CCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHH
Confidence 00 0000 001111 123667788999999999999999999999999987777777666
Q ss_pred -hhhHHHHHhh--------hcc-Cc----------c--hhHHHHHHHHHHHHHHHHHHhhhhcccC
Q 012629 395 -PLNIFVCVVL--------YNV-DA----------F--PITVMFGMCSIFLLVASVLQRRLMVIAD 438 (459)
Q Consensus 395 -~~~~~~~~~l--------~~~-~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (459)
.+|+++|..+ .+. .. | .+|..|++++.+.+...+.++..++..+
T Consensus 282 ~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 282 AILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 3555555433 121 00 0 2466677777777776666665555444
No 285
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=85.33 E-value=29 Score=32.76 Aligned_cols=134 Identities=15% Similarity=0.064 Sum_probs=58.2
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhccccCCC-ccCCch-h---HHHHHHHHHHHHHHHHHHHHhh-----cCCCCcc
Q 012629 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEIPH-G---FIFATFMLASMLGSSLASRLMA-----RSPPRVE 313 (459)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~---~~~~~~~~~~~~~~~~~g~l~d-----r~g~~~~ 313 (459)
.++++-+...+..-+.++.-++. ..-.|.+++. +.+... + ..+..+.+ -++...+.| |+|||+.
T Consensus 27 ~~d~~~illLl~LYllQGiP~GL-~~~iP~lL~ak~vSyt~~a~fS~ay~P~sL-----KllWaPiVDs~y~k~~Grrks 100 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPLGL-IGAIPLLLQAKGVSYTSQAIFSFAYWPFSL-----KLLWAPIVDSVYSKRFGRRKS 100 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCchhH-hhhhHHHhcCCCcchhhhhhhhhhhhHHHH-----HHHHHhhhHHHHHHhhccccc
Confidence 33444444444444556665653 4477888873 222222 1 11122222 234455555 9999996
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhhhcchhhHHHHHHhccCChhhhhhh
Q 012629 314 SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTI 388 (459)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~ 388 (459)
.+.-.-. +.+..+..+.......-.. ....+ ........+++.-+..+.--.....+......+++-|-+
T Consensus 101 Wvvp~q~-llG~~mllLs~~v~~~~g~---ng~~p-~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgya 170 (510)
T KOG3574|consen 101 WVVPCQY-LLGLFMLLLSYLVDRGLGG---NGGLP-NVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYA 170 (510)
T ss_pred eeeehHH-HHHHHHHHHhhCCCccccc---CCCCc-chHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCch
Confidence 4433333 3333333332221111000 00011 011222233444444443335566666666677665433
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=83.63 E-value=33 Score=32.62 Aligned_cols=34 Identities=9% Similarity=0.139 Sum_probs=21.5
Q ss_pred hHHHHHHHHHhhhcchhhHHHHHHhccCChhhhh
Q 012629 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARS 386 (459)
Q Consensus 353 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~ 386 (459)
..+...++.+.+.+......+...++.-++..++
T Consensus 119 vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqa 152 (406)
T KOG1479|consen 119 VTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQA 152 (406)
T ss_pred HHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHH
Confidence 4455566677777777777777777754443344
No 287
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=83.42 E-value=26 Score=29.74 Aligned_cols=28 Identities=21% Similarity=0.309 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 012629 284 GFIFATFMLASMLGSSLASRLMARSPPR 311 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 311 (459)
...+..++++.++.-...+...++.++|
T Consensus 153 ~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 153 ALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4666777777777666666666555443
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=79.17 E-value=69 Score=31.64 Aligned_cols=25 Identities=8% Similarity=0.126 Sum_probs=21.2
Q ss_pred HHHHHHhccCChhhhhhhhhhhhhh
Q 012629 371 SIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 371 ~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
..+.+++|....++..+-+++...+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~g 188 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLG 188 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 5799999999999988888777764
No 289
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=78.74 E-value=38 Score=30.24 Aligned_cols=80 Identities=11% Similarity=0.157 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHH
Q 012629 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (459)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (459)
.|.++.......++...+.|-+.||.|||+. .+...+.-+..++ ..+ .+... ++.++-.+-|
T Consensus 74 IgqLfiaGfgSsmLFGtivgSLaDkqGRKra---cvtycitYiLsCi---TKh--------SpqYk----VLmVGR~LGG 135 (454)
T KOG4332|consen 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRA---CVTYCITYILSCI---TKH--------SPQYK----VLMVGRVLGG 135 (454)
T ss_pred cceeeecccchHHHHHHHHHHHHhhhccccc---eeeehHHHHHHHH---hhc--------CCceE----EEeehhhhhh
Confidence 3555544444566677788899999999983 3333333322222 111 12222 5567777777
Q ss_pred hhhcchhhHHHH-HHhccC
Q 012629 363 ACVGIFWPSIMK-MRSQYI 380 (459)
Q Consensus 363 ~~~~~~~~~~~~-~~~~~~ 380 (459)
+.....+...-+ ++.|..
T Consensus 136 iaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 136 IATSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 777777766555 355554
No 290
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=78.37 E-value=7.4 Score=27.65 Aligned_cols=62 Identities=21% Similarity=0.322 Sum_probs=39.7
Q ss_pred hhhccccCCCccCCch---hHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHH
Q 012629 268 FLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV 332 (459)
Q Consensus 268 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~ 332 (459)
+..+|...++. +.+. +.+.+.+.++.++|++...++.++.++++ .+..+.....+......+
T Consensus 12 TplLP~M~~~~-~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~--~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 12 TPLLPLMQADG-GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRR--LLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HhHhHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH--HHHHHHHHHHHHHHHHHH
Confidence 44566665543 3332 78889999999999999999988854444 344444444444444333
No 291
>PRK03612 spermidine synthase; Provisional
Probab=77.82 E-value=29 Score=34.59 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=16.1
Q ss_pred HHHHHHHhhhcchhhHHHHHHhccC
Q 012629 356 LGFCTFEACVGIFWPSIMKMRSQYI 380 (459)
Q Consensus 356 ~~~~l~g~~~~~~~~~~~~~~~~~~ 380 (459)
...++.++..|+..|....+..+..
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~ 139 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIR 139 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3344556777877787776666543
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=77.47 E-value=0.91 Score=41.72 Aligned_cols=106 Identities=17% Similarity=0.166 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHHhh
Q 012629 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (459)
Q Consensus 285 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 364 (459)
..+..++++..+|+.+.++..-+..+++ .+......-.+. ++.+......+.++..+......+..++.++++|+.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~--~l~~~s~~R~~f--iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~T 261 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPR--WLWILSLLRFLF--IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFT 261 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccc--cHHHHHHHHHHH--HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHc
Confidence 3456778899999988876532211222 133222222211 222222211111000011111124556778889999
Q ss_pred hcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 365 VGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 365 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.|-..+..+.+..+..++++|..+-.+.++
T Consensus 262 NGyl~tl~m~~~p~~v~~~e~e~aG~~~~~ 291 (309)
T PF01733_consen 262 NGYLSTLAMMYAPKSVSPEERELAGSVMSF 291 (309)
T ss_dssp -----HHHH---------------------
T ss_pred cchhhhceeeeCCCcCCHHHHHHHHHHHHH
Confidence 998889999999999998887776555444
No 293
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=75.27 E-value=30 Score=33.44 Aligned_cols=113 Identities=18% Similarity=0.063 Sum_probs=69.8
Q ss_pred hhhhccCCCccchhhHHHHHHHHhhhhhccccchhcccCcchhhHHHHHHHHHHH----HHhhCCc-------hHHHHHH
Q 012629 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC----ITKHSPQ-------YKILMIG 130 (459)
Q Consensus 62 ~~~~~~~~s~~~~g~~~~~~~~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~----l~~~~~~-------~~~l~~~ 130 (459)
.....-|+++.++|..-+.+.+.+..+.....++.+|+|..|.=..+...-.... ..-+.+. ...++.+
T Consensus 283 ~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~g 362 (432)
T PF06963_consen 283 AYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGG 362 (432)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHH
Confidence 3344559999999988888888888888899999999999888777766544321 1122222 2233333
Q ss_pred HHHHHhHhhhhhhhhhhhhhhhc---cccccchhhHHHHHHHHHHHHH
Q 012629 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGN 175 (459)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~ 175 (459)
-.+.-+|.=...-+... ++.|. ++|+...+.+.+..+..-.+-.
T Consensus 363 i~~SR~GLW~fDL~~~q-i~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 363 IALSRIGLWSFDLAVTQ-IMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred HHHHHHHHHhhhHHHHH-hhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 33333343333333333 56665 6677777776666665444433
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=75.00 E-value=87 Score=30.65 Aligned_cols=76 Identities=14% Similarity=0.059 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHhhhhccchhhhhhhccCCC---ccchhhHHHHHHH-HhhhhhccccchhcccCcchhhHHHHHHHHH
Q 012629 39 KNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFG---KGEIGQLFIAGFG-SSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (459)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~s---~~~~g~~~~~~~~-~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~ 114 (459)
.+.-+....+.+++..+...++-.+.+.+.++ +..+..+-..... .+.+..++.+++++++.|.+++-..+..+..
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~ 104 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLG 104 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 33434444444444444434444555666554 3334454444444 3446666899999999999998776655544
No 295
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=74.21 E-value=80 Score=29.83 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=27.6
Q ss_pred HHHHHHHhhhcchhhHHHHHHhccCChhhhhhhhhhhhh
Q 012629 356 LGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 356 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
++....-+|.=+.-+...-..+|..|+++|..+.|+.+.
T Consensus 391 agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqns 429 (503)
T KOG2601|consen 391 AGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNS 429 (503)
T ss_pred HHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHH
Confidence 333333344434446777889999999999999988775
No 296
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=69.58 E-value=73 Score=30.97 Aligned_cols=31 Identities=6% Similarity=0.184 Sum_probs=20.1
Q ss_pred hHHHHHHHHHhhhcchhhHHHHHHhccCChhh
Q 012629 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (459)
Q Consensus 353 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~ 384 (459)
..+...++.|++.+........+.+. +|++.
T Consensus 108 ~~~~~v~~~g~~~~~~q~s~~gla~~-fp~~~ 138 (437)
T TIGR00939 108 TTMASVVIINSGMALLQGSLFGLAGV-FPSTY 138 (437)
T ss_pred HHHHHHHHHHhhhhhhcccchhhccc-CCHHH
Confidence 44455566677777777777777775 56554
No 297
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=65.69 E-value=46 Score=28.78 Aligned_cols=101 Identities=16% Similarity=-0.006 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCccchhhHHHHHHH--HHHHHhhhhccchhhhhhhccCCCccchhhHHHHHH
Q 012629 5 FYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVY--SLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGF 82 (459)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~l~~~~~~~~~s~~~~g~~~~~~~ 82 (459)
..-.+.++.++.......++.+++.+|.++.+ .+....-| ++........ ...+..+++..++|......+
T Consensus 69 ~~h~imal~li~~Gi~ti~~W~~~~~~~s~~t--~lal~~PCPvCl~Ai~~S~~-----l~a~~~~~s~~~ig~~~g~if 141 (224)
T PF09930_consen 69 VIHLIMALLLIYAGIYTIKKWKKSGKDSSRRT--FLALSLPCPVCLTAIFFSIM-----LLAPSIGLSGWEIGLVLGLIF 141 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCcccc--hhhhhcCchHHHHHHHHHHH-----HHHHhcCchHHHHHHHHHHHH
Confidence 44556677777777777766544433332221 12222211 2222222211 344667889889987666655
Q ss_pred HHhhhhhccccchhcccCcchhhHHHHHHHHHH
Q 012629 83 GSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (459)
Q Consensus 83 ~~~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~ 115 (459)
.... ...-.+.||.+.|+....+.....+|
T Consensus 142 ~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~G 171 (224)
T PF09930_consen 142 FILI---LLSSFIFRRLKKPYPIILGNFMIFLG 171 (224)
T ss_pred HHHH---HHHHHHHHHhcCCCchHHHHHHHHHH
Confidence 5444 35666777888666667776665555
No 298
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.08 E-value=10 Score=27.95 Aligned_cols=27 Identities=33% Similarity=0.389 Sum_probs=17.1
Q ss_pred HHHHHHHhhhhhccccchhccc-Ccchh
Q 012629 78 FIAGFGSSMLFGTIVGSLADKQ-GRKRA 104 (459)
Q Consensus 78 ~~~~~~~~~l~~~~~G~l~Dr~-Grr~~ 104 (459)
.+.=++.+.+.+...||+.||| |.++.
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 3444555666677788888886 44443
No 299
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=62.38 E-value=1.6e+02 Score=28.88 Aligned_cols=102 Identities=7% Similarity=-0.057 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCC-----------CC-Cccccc-----hhHH
Q 012629 293 ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK-----------SG-GISFSG-----SLQL 355 (459)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~-----~~~~ 355 (459)
++++..++.+++.+++.+++ +............++..+.-......-|+ .+ +..+.. |...
T Consensus 74 ~avif~~iy~kl~~~lt~~~--vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s 151 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREK--VFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYS 151 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHH--HHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHH
Confidence 46777788899999887666 23333333333333332222211110000 11 111111 3333
Q ss_pred HHHHHHHhhhcchhh-HHHHHHhccCChhhhhhhhhhhhhhh
Q 012629 356 LGFCTFEACVGIFWP-SIMKMRSQYIPEEARSTIMNFFRIPL 396 (459)
Q Consensus 356 ~~~~l~g~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (459)
....+.-.--..... ..+..++|....++..+-+++.++..
T Consensus 152 ~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ 193 (509)
T COG3202 152 LFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGA 193 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHH
Confidence 333333333333333 67889999999999888888777753
No 300
>COG2119 Predicted membrane protein [Function unknown]
Probab=55.93 E-value=1.2e+02 Score=25.23 Aligned_cols=28 Identities=14% Similarity=0.090 Sum_probs=21.1
Q ss_pred hhhccccchhcccCcchhhHHHHHHHHH
Q 012629 87 LFGTIVGSLADKQGRKRACVTYCLTYIL 114 (459)
Q Consensus 87 l~~~~~G~l~Dr~Grr~~~~~~~~~~~~ 114 (459)
+.-..+.+++||+..|++-.++.+++.+
T Consensus 149 laVl~G~~ia~ki~~r~l~~~aallFl~ 176 (190)
T COG2119 149 LAVLLGKLIAGKLPERLLRFIAALLFLI 176 (190)
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 3333577899999999988887776654
No 301
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=54.26 E-value=34 Score=24.84 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=13.5
Q ss_pred hhhHHHHHhhhccCcchhHHHHHHHHHHHHHHHH
Q 012629 395 PLNIFVCVVLYNVDAFPITVMFGMCSIFLLVASV 428 (459)
Q Consensus 395 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 428 (459)
..+..++......-...+-..+.+.+++.+....
T Consensus 35 ~~slgv~Q~~~kvialQWIFAFvI~avlfv~sl~ 68 (97)
T PF08611_consen 35 TASLGVGQFFIKVIALQWIFAFVIAAVLFVLSLV 68 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455544332112233344444444444433
No 302
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=50.49 E-value=2.6e+02 Score=27.77 Aligned_cols=20 Identities=15% Similarity=0.021 Sum_probs=13.3
Q ss_pred HHHHHHHHhhcCCCCcchhH
Q 012629 297 GSSLASRLMARSPPRVESYM 316 (459)
Q Consensus 297 ~~~~~g~l~dr~g~~~~~~l 316 (459)
+.++=...++|+|||+..++
T Consensus 56 aPiVDs~y~~~~GRRKSWii 75 (544)
T PF13000_consen 56 APIVDSVYSKRIGRRKSWII 75 (544)
T ss_pred hhhhhhhcccccCCcchhhh
Confidence 34455566678999996433
No 303
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=49.44 E-value=2.6e+02 Score=27.25 Aligned_cols=53 Identities=15% Similarity=0.265 Sum_probs=29.8
Q ss_pred CCccCCchhHHHHHHHHHHHHHHH---------HHHHHhhcCCCCcchhHHHHHHHHHHHHHHHH
Q 012629 276 PNDEEIPHGFIFATFMLASMLGSS---------LASRLMARSPPRVESYMQIVFVVSSVSLLLPI 331 (459)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~ 331 (459)
++++|...+.+..+..++.++|.. +...+.|++|+|+. .....+.+..+..+.
T Consensus 51 ~~GfG~tl~~igivI~lG~~iG~~l~~SGaa~~IA~~l~~~~G~k~~---~~A~~i~g~iv~IPv 112 (441)
T PF02447_consen 51 TKGFGSTLGSIGIVIALGAMIGKLLEESGAAERIANTLLKKFGEKRA---PLALAITGFIVGIPV 112 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHcCCCcc---cHHHHHHHHHhhhHH
Confidence 455555455555566666666665 45667778998873 333334443334433
No 304
>COG4769 Predicted membrane protein [Function unknown]
Probab=46.79 E-value=82 Score=25.49 Aligned_cols=45 Identities=13% Similarity=0.105 Sum_probs=31.8
Q ss_pred hhhccccchhcccCcchhhHHHHHHHHHHHHHhhCCchHHHHHHHHHHHh
Q 012629 87 LFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGI 136 (459)
Q Consensus 87 l~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~ 136 (459)
+.+...=++..++|+|..-.+ ++++..++.+|..++.+++++.+-
T Consensus 88 i~S~L~m~~l~~f~~k~~S~l-----giS~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 88 ILSTLFMYFLYQFGPKYLSLL-----GISVMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHcCCceEeee-----ehhhHHHHHHhHHHHHHHHHHHhc
Confidence 333445577889998886333 234455888999999999998764
No 305
>PF04172 LrgB: LrgB-like family ; InterPro: IPR007300 The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control murein hydrolase activity and penicillin tolerance [].
Probab=44.49 E-value=2.1e+02 Score=24.69 Aligned_cols=46 Identities=11% Similarity=0.075 Sum_probs=29.5
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHH
Q 012629 279 EEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS 326 (459)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~ 326 (459)
.|.++++......+.+++|..++..+.|+++-|.. ..-+......+
T Consensus 129 iGG~~sLta~~VvitGi~Ga~~g~~llk~~~I~~~--~A~GlalG~~s 174 (215)
T PF04172_consen 129 IGGIPSLTAVFVVITGILGAVLGPPLLKLLRIKDP--VARGLALGTAS 174 (215)
T ss_pred hCChHHHHHHHHHHHhhHHHHhHHHHHhHcccccH--HHHHHHhccch
Confidence 34444555556667789999999999999876653 33444443333
No 306
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=43.33 E-value=49 Score=26.53 Aligned_cols=28 Identities=11% Similarity=0.054 Sum_probs=20.5
Q ss_pred hHHHHHHhccCChhhhhhhhhhhhhhhh
Q 012629 370 PSIMKMRSQYIPEEARSTIMNFFRIPLN 397 (459)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 397 (459)
.+.|...+...+++..|+..|+-.+-.|
T Consensus 113 GisYGilSaSWD~~r~GSllG~~e~~~N 140 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLGWEEFKRN 140 (153)
T ss_pred hhhhhhcccccCCCCCCCcccHHHHHHh
Confidence 4566777778888888988887766443
No 307
>PRK11588 hypothetical protein; Provisional
Probab=41.80 E-value=3.6e+02 Score=26.75 Aligned_cols=36 Identities=8% Similarity=0.049 Sum_probs=18.7
Q ss_pred ccchhcccCcchhhHHH--HHHHHH-HHHHhhCCchHHH
Q 012629 92 VGSLADKQGRKRACVTY--CLTYIL-SCITKHSPQYKIL 127 (459)
Q Consensus 92 ~G~l~Dr~Grr~~~~~~--~~~~~~-~~l~~~~~~~~~l 127 (459)
.+++.+|++.|..+++- ++++++ +...+.+.....+
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f 174 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAF 174 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 46778888766544443 334444 2344555544333
No 308
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=40.64 E-value=2.7e+02 Score=24.95 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHhhccCCCC
Q 012629 7 LVFGALGAVVAALELSKTNKDR 28 (459)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~ 28 (459)
.++.+++++.+.-.+...++++
T Consensus 105 ~G~~Al~liiiGv~lts~~~~~ 126 (269)
T PF06800_consen 105 IGFLALVLIIIGVILTSYQDKK 126 (269)
T ss_pred HHHHHHHHHHHHHHHhcccccc
Confidence 4445555555554444444433
No 309
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=36.86 E-value=86 Score=26.38 Aligned_cols=13 Identities=23% Similarity=0.460 Sum_probs=9.1
Q ss_pred cccchhcccCcch
Q 012629 91 IVGSLADKQGRKR 103 (459)
Q Consensus 91 ~~G~l~Dr~Grr~ 103 (459)
..+...|||||+-
T Consensus 154 ~i~~~leryg~~l 166 (191)
T PF03596_consen 154 IIAEFLERYGRWL 166 (191)
T ss_pred HHHHHHHHhcccH
Confidence 4667777888764
No 310
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=36.75 E-value=66 Score=30.05 Aligned_cols=25 Identities=8% Similarity=0.073 Sum_probs=17.9
Q ss_pred hHHHHHHhccCChhhhhhhhhhhhh
Q 012629 370 PSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
...++++-+.++++++-++.|-.+.
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~Ra 137 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRA 137 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHH
Confidence 4566777788888887777666555
No 311
>PRK11469 hypothetical protein; Provisional
Probab=36.73 E-value=1.8e+02 Score=24.41 Aligned_cols=26 Identities=8% Similarity=0.006 Sum_probs=19.0
Q ss_pred cccchhcccCcchhhHHHHHHHHHHH
Q 012629 91 IVGSLADKQGRKRACVTYCLTYILSC 116 (459)
Q Consensus 91 ~~G~l~Dr~Grr~~~~~~~~~~~~~~ 116 (459)
.+.++.+++|||.-++-+.++..++.
T Consensus 154 lG~~~g~~~g~~a~~lgG~iLI~iGi 179 (188)
T PRK11469 154 VGRFIGSIIGKKAEILGGLVLIGIGV 179 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667888888888888877775
No 312
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=35.67 E-value=3.8e+02 Score=26.38 Aligned_cols=14 Identities=14% Similarity=0.135 Sum_probs=8.8
Q ss_pred HHHHHhhcCCCCcc
Q 012629 300 LASRLMARSPPRVE 313 (459)
Q Consensus 300 ~~g~l~dr~g~~~~ 313 (459)
....+.+|+++|+.
T Consensus 103 ~v~~l~k~l~~~~~ 116 (465)
T PF03606_consen 103 LVNLLIKPLKGKKN 116 (465)
T ss_pred HHHHHHHHhcCCcc
Confidence 44566677776654
No 313
>TIGR00659 conserved hypothetical protein TIGR00659. Members of this small but broadly distibuted (Gram-positive, Gram-negative, and Archaeal) family appear to have multiple transmembrane segments. The function is unknown. A homolog, LrgB of Staphylococcus aureus, in the same small superfamily but in an outgroup to this subfamily, is regulated by LytSR and is suggested to act as a murein hydrolase. Of the three paralogous proteins in B. subtilis, one is a full length member of this family, one lacks the C-terminal 60 residues and has an additional 128 N-terminal residues but branches within the family in a phylogenetic tree, and one is closely related to LrgB and part of the outgroup.
Probab=35.64 E-value=3e+02 Score=23.94 Aligned_cols=49 Identities=12% Similarity=0.073 Sum_probs=31.0
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHH
Q 012629 279 EEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLL 329 (459)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~ 329 (459)
.|.++++......+.+++|..++..+.|+++-|.. ..-+......+-..
T Consensus 139 iGG~~sLta~~vvitGi~Ga~~g~~ll~~~~i~~~--~A~GlalG~aaHai 187 (226)
T TIGR00659 139 IGGIPAVTAVFVILTGLLGTVFGPMVLRYFRVKNE--IARGLLLGTSSHGL 187 (226)
T ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcH--HHHHHHHhHHHHHH
Confidence 34444555555667789999999999998876652 44444444444333
No 314
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=33.74 E-value=4.3e+02 Score=26.47 Aligned_cols=27 Identities=15% Similarity=0.244 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 012629 286 IFATFMLASMLGSSLASRLMARSPPRV 312 (459)
Q Consensus 286 ~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (459)
......+.+.++...++++...++.++
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g~~ 328 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGGKK 328 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCCc
Confidence 344555667777778888887776654
No 315
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=29.55 E-value=3.5e+02 Score=25.24 Aligned_cols=57 Identities=9% Similarity=0.091 Sum_probs=40.8
Q ss_pred hhhhhccccchhcccCcchhhHHHHHHHHH--HH-H-HhhCCchHHHHHHHHHHHhHhhhh
Q 012629 85 SMLFGTIVGSLADKQGRKRACVTYCLTYIL--SC-I-TKHSPQYKILMIGRILGGIATSLL 141 (459)
Q Consensus 85 ~~l~~~~~G~l~Dr~Grr~~~~~~~~~~~~--~~-l-~~~~~~~~~l~~~r~l~G~~~~~~ 141 (459)
+.+.+++.+++.+++|.-+.+..+.++..= +. + ...++|......+..+.|.-.|..
T Consensus 59 a~~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~T 119 (354)
T PF04346_consen 59 AAFLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGAT 119 (354)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhccc
Confidence 556677888999999999998888776642 33 3 377888887777766666654443
No 316
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=27.51 E-value=5.8e+02 Score=24.80 Aligned_cols=25 Identities=16% Similarity=-0.047 Sum_probs=15.5
Q ss_pred hHHHHHHhccCChhhhhhhhhhhhh
Q 012629 370 PSIMKMRSQYIPEEARSTIMNFFRI 394 (459)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (459)
.....|.........|+..++..-.
T Consensus 364 ~Li~~Y~~~vl~~~k~~~~~~~~L~ 388 (430)
T PF06123_consen 364 GLISLYLSSVLKSWKRGLIFAGLLA 388 (430)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHH
Confidence 3455666777777777776655333
No 317
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=27.12 E-value=98 Score=26.79 Aligned_cols=62 Identities=11% Similarity=0.054 Sum_probs=32.7
Q ss_pred ccchhcccCcch--------hhHHHHHHHHH--HHHHhhC--CchHHHHHHHHHHHhHhhhhhhhhhhhhhhhc
Q 012629 92 VGSLADKQGRKR--------ACVTYCLTYIL--SCITKHS--PQYKILMIGRILGGIATSLLFSAFESWLVAEH 153 (459)
Q Consensus 92 ~G~l~Dr~Grr~--------~~~~~~~~~~~--~~l~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (459)
.+.++||||-+. +++.+.++..+ +.+..+. -+...=...-.-.|+|.|....++...+...+
T Consensus 127 laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~ 200 (241)
T PF11299_consen 127 LAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAY 200 (241)
T ss_pred eeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHC
Confidence 578999998653 33444433332 1121211 11112233445588998888887766454443
No 318
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria.
Probab=26.67 E-value=3.8e+02 Score=27.54 Aligned_cols=20 Identities=5% Similarity=0.243 Sum_probs=12.4
Q ss_pred hhhhccccccchhhHHHHHH
Q 012629 149 LVAEHNKRGFEQQWLSITFS 168 (459)
Q Consensus 149 ~i~~~~~r~~~~~~~~~~~~ 168 (459)
.+.+.+|+|+..........
T Consensus 234 tiP~Mkk~GY~~~~Aaav~A 253 (613)
T TIGR02123 234 TIPLMKRAGYKPEFAGAVEA 253 (613)
T ss_pred HHHHHHHcCCCHHHHHHHHH
Confidence 35566888888775444433
No 319
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.64 E-value=2.8e+02 Score=20.78 Aligned_cols=27 Identities=7% Similarity=0.073 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC-CCCc
Q 012629 286 IFATFMLASMLGSSLASRLMARS-PPRV 312 (459)
Q Consensus 286 ~~~~~~~~~~~~~~~~g~l~dr~-g~~~ 312 (459)
-.+.-.+++++.....||+.||+ +..+
T Consensus 47 klssefIsGilVGa~iG~llD~~agTsP 74 (116)
T COG5336 47 KLSSEFISGILVGAGIGWLLDKFAGTSP 74 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 33444466777777899999996 4444
No 320
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=26.15 E-value=4.3e+02 Score=23.72 Aligned_cols=30 Identities=10% Similarity=0.220 Sum_probs=12.6
Q ss_pred hhhHHHHHhh-hccCcchhHHHHHHHHHHHHH
Q 012629 395 PLNIFVCVVL-YNVDAFPITVMFGMCSIFLLV 425 (459)
Q Consensus 395 ~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~ 425 (459)
..+.+.+.++ .+.++ .....+...++.+++
T Consensus 84 vg~sl~gv~~fgEW~~-~~~~~~G~~Al~lii 114 (269)
T PF06800_consen 84 VGTSLIGVLFFGEWTT-TTQKIIGFLALVLII 114 (269)
T ss_pred HHHHHHHHhhcCCCCC-cchHHHHHHHHHHHH
Confidence 4455555444 23322 233344444444433
No 321
>PRK11715 inner membrane protein; Provisional
Probab=25.64 E-value=6.3e+02 Score=24.60 Aligned_cols=26 Identities=12% Similarity=-0.134 Sum_probs=16.4
Q ss_pred hHHHHHHhccCChhhhhhhhhhhhhh
Q 012629 370 PSIMKMRSQYIPEEARSTIMNFFRIP 395 (459)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (459)
.....|.........|+..++..-..
T Consensus 370 ~li~~Y~~~vl~~~k~g~~~~~~L~~ 395 (436)
T PRK11715 370 LLIGFYLSAVLRSWKRGLLFAAALAA 395 (436)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 34556667777777788777654433
No 322
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=25.31 E-value=1.3e+02 Score=22.37 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=20.0
Q ss_pred HhcchhHHHHHHHHHHhhhhhhhhhhhhhccccCCCc
Q 012629 242 AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (459)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (459)
...++..+..-.......+...|+....+...++.+.
T Consensus 43 r~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~ 79 (106)
T PF11872_consen 43 RLLSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQ 79 (106)
T ss_pred HHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455554444555555555666666666665544
No 323
>PRK11469 hypothetical protein; Provisional
Probab=24.81 E-value=4.2e+02 Score=22.24 Aligned_cols=19 Identities=16% Similarity=0.092 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHhhcCCCCc
Q 012629 294 SMLGSSLASRLMARSPPRV 312 (459)
Q Consensus 294 ~~~~~~~~g~l~dr~g~~~ 312 (459)
...|..++.++.+++++|.
T Consensus 148 ~~~G~~lG~~~g~~~g~~a 166 (188)
T PRK11469 148 STLGMMVGRFIGSIIGKKA 166 (188)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444445555555565543
No 324
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=24.79 E-value=2.6e+02 Score=25.85 Aligned_cols=80 Identities=20% Similarity=0.284 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccchhHHHHHHHHH
Q 012629 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (459)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (459)
.|.+...-.+-.++..+......||+.-.. ...+...+.+..+.+..+.... +..+.+.++..
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~--Ri~~~v~~sa~s~~lVafs~s~---------------~~sL~GV~~aS 126 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGF--RIALVVLLSALSFFLVAFSNSV---------------PMSLLGVVFAS 126 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccch--HHHHHHHHHhcceEEEEeccch---------------hHHHhhhhhhh
Confidence 355555555667777788888888874322 1233333333333332222111 35566777777
Q ss_pred hhhcchhhHHHHHHhcc
Q 012629 363 ACVGIFWPSIMKMRSQY 379 (459)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ 379 (459)
++.|..-....++.+..
T Consensus 127 issGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 127 ISSGLGEITFLALSSRY 143 (409)
T ss_pred hcCCcceeehhhhhccC
Confidence 77776555555555444
No 325
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=22.60 E-value=4.5e+02 Score=21.77 Aligned_cols=15 Identities=33% Similarity=0.346 Sum_probs=7.9
Q ss_pred HHHHHHHhhcCCCCc
Q 012629 298 SSLASRLMARSPPRV 312 (459)
Q Consensus 298 ~~~~g~l~dr~g~~~ 312 (459)
.....+..+|+.+++
T Consensus 154 ~~~~~~~~~~~~~~~ 168 (191)
T PF01810_consen 154 ALLGSRLRRKFSSRR 168 (191)
T ss_pred HHHHHHHHHHHhhhH
Confidence 344555556665544
No 326
>COG0733 Na+-dependent transporters of the SNF family [General function prediction only]
Probab=21.07 E-value=7.8e+02 Score=23.98 Aligned_cols=24 Identities=29% Similarity=0.268 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhccCC
Q 012629 3 MFFYLVFGALGAVVAALELSKTNK 26 (459)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~ 26 (459)
.||-++++.-+++-+..++.|+++
T Consensus 223 ~FFsLSlG~g~mitYsSYL~k~~~ 246 (439)
T COG0733 223 AFFSLSLGFGIMITYSSYLSKKSD 246 (439)
T ss_pred HHHHHHHHHHHHHHHHhhcCcccc
Confidence 477788888888888888877654
No 327
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=20.59 E-value=7e+02 Score=25.37 Aligned_cols=91 Identities=13% Similarity=0.081 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHhhcC-CCCcchhHHHHHHHHHHHHHHHHHhhhcc--CCCC--------CCCCCccccchhHHHHH
Q 012629 290 FMLASMLGSSLASRLMARS-PPRVESYMQIVFVVSSVSLLLPIVTSFLV--APSN--------VKSGGISFSGSLQLLGF 358 (459)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~-g~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~ 358 (459)
..-........+++++|-+ ||-+ .+.++..+...+..++.+..... .+.. +-...-......+..++
T Consensus 82 f~G~~~~~~l~g~~laD~f~gry~--tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l 159 (571)
T KOG1237|consen 82 FGGTQFLLPLLGAFLADSFLGRYF--TINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGAL 159 (571)
T ss_pred HhhHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHH
Confidence 3334555567888888865 4433 34444444444433332222211 0000 00001111122455666
Q ss_pred HHHHhhhcchhhHHHHHHhccCCh
Q 012629 359 CTFEACVGIFWPSIMKMRSQYIPE 382 (459)
Q Consensus 359 ~l~g~~~~~~~~~~~~~~~~~~p~ 382 (459)
.+..+|.|..-|...+.-.|.+++
T Consensus 160 ~lia~G~gg~r~~~~~fGadQfd~ 183 (571)
T KOG1237|consen 160 YLIALGAGGIRPCLLAFGADQFDE 183 (571)
T ss_pred HHheeccCCCCCcchhhcccccCc
Confidence 777778888889999999999983
No 328
>COG2610 GntT H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]
Probab=20.57 E-value=8e+02 Score=23.95 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=24.2
Q ss_pred CCccCCchhHHHHHHHHHHHHHHHH---------HHHHhhcCCCCc
Q 012629 276 PNDEEIPHGFIFATFMLASMLGSSL---------ASRLMARSPPRV 312 (459)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~l~dr~g~~~ 312 (459)
.++++...+.+..+..++.++|.++ .-.+.+|+|+||
T Consensus 52 ~~G~ggtlg~i~~Vi~lGam~GkLle~sGaA~~IA~tii~~~G~kr 97 (442)
T COG2610 52 MKGFGGTLGSLALVIGLGAMLGKLLEDSGAAESIADTLIRKFGEKR 97 (442)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhCcch
Confidence 3455555566666777776666554 346777899888
No 329
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=20.36 E-value=7.3e+02 Score=23.39 Aligned_cols=18 Identities=17% Similarity=0.141 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHhhcCC
Q 012629 292 LASMLGSSLASRLMARSP 309 (459)
Q Consensus 292 ~~~~~~~~~~g~l~dr~g 309 (459)
+..++.....|++..|.+
T Consensus 6 i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 344555556667776653
No 330
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=20.27 E-value=5.8e+02 Score=22.18 Aligned_cols=25 Identities=8% Similarity=0.151 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcC
Q 012629 284 GFIFATFMLASMLGSSLASRLMARS 308 (459)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~ 308 (459)
+..+..++++..+.-+..|..++++
T Consensus 167 al~mlaFGlGTlP~ll~~G~~s~~~ 191 (232)
T COG2836 167 ALVMLAFGLGTLPNLLAMGIFSSKL 191 (232)
T ss_pred HHHHHHHhhcccHHHHHHHHHHHHH
Confidence 5677778888777777777777665
Done!