Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>012630
MCLNAVFGSFVWVNSSVLLVYTIPLSRGDSPKKSLVPFGPKIQSNEQQNVIQNRYTEGLL
KDEFDEYLFEHYTTTQLVLATLDGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTV
SYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVET
QDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQETWFKTT
QTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYIL
LNGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKIL
TSKESKTEITQYWIQSWPHKKCRQITDFPHPYPLLSTLQKELIKYQRKDGVQLTAKLYLP
TGYDPSKDGHLLCLFWAYPGEFRSKDAAGQVRGSPNEFS

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012630
        (459 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q8EHB8 - symbol:SO_1310 "Serine peptidase S9 fa...   467  1.2e-43   1
TIGR_CMR|SO_1310 - symbol:SO_1310 "conserved hypothetical...   467  1.2e-43   1


>UNIPROTKB|Q8EHB8 [details] [associations]
            symbol:SO_1310 "Serine peptidase S9 family" species:211586
            "Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR001375
            Pfam:PF00326 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0006508
            GO:GO:0008236 EMBL:AE014299 GenomeReviews:AE014299_GR
            RefSeq:NP_716930.1 ProteinModelPortal:Q8EHB8 DNASU:1169132
            GeneID:1169132 KEGG:son:SO_1310 PATRIC:23522278
            HOGENOM:HOG000295385 OMA:FPIQSER ProtClustDB:CLSK891098
            Uniprot:Q8EHB8
        Length = 801

 Score = 467 (169.5 bits), Expect = 1.2e-43, P = 1.2e-43
 Identities = 127/457 (27%), Positives = 214/457 (46%)

Query:     3 LNAVFG-SFVWVNSSVLLVYTIPLSRGDSPKKSLVPFGPKIQSNEQQNVIQNRYTEGLLK 61
             LN      + W N+  LL   + +++  S  +  V   PK +    +N  Q  Y + LLK
Sbjct:   160 LNGTISLDYQWANNKTLLARFV-IAQDISASQPHVSISPKTKETSGKNSPQRTYQD-LLK 217

Query:    62 DEFDEYLFEHYTTTQLVLATLDGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVS 121
                D+ LF   TT+QL L  L+G + + G P I      SPD +YIL   I  P+S  V 
Sbjct:   218 TSADKQLFSRLTTSQLALVDLEGKLTKIGAPGIIEDFSVSPDGQYILSRQITTPFSTQVK 277

Query:   122 YTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQ 181
             Y  FP   +++  +G+ +  L +    E+ P   +SV  G R+  W   + +TL + +  
Sbjct:   278 YDDFPTLTEIYNLNGQLITLLHQSQGGESRPQGKDSVLPGPRMFHWVQGQAATLAFTKAL 337

Query:   182 DGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQETWFKTTQ 241
             D G ++ +   RD ++    +P   ++   + +   R   + W ++ LAL+ E   K  Q
Sbjct:   338 DQGDSQRDAPQRDSLWL--LDPPFTQQATRVAQTQWRITDIDWAENHLALITERNSKAQQ 395

Query:   242 TRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILL 301
              R   ++    +++   L +R+  D Y D GL   +    G   +  ++ +  + T ++ 
Sbjct:   396 IRLSSLNTRLGESSLHTLNERNLRDKYQDLGL-FAKHYYPGKGQVVSLQ-QGAKTTGLIH 453

Query:   302 NGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILT 361
              G+GATP+GD PFL   ++ T     +W+S   +       LNLD          L+++ 
Sbjct:   454 YGQGATPQGDKPFLKRTSLITSESSLLWQSASNRLESVRYVLNLDP---------LQLII 504

Query:   362 SKESKTEITQYWIQSWPHKKCRQITDFPHPYPLLSTLQKELIKYQRKDGVQLTAKLYLPT 421
             ++ES TE     + +   +    + + P        +QK+LI ++R DGV L+  LYLP 
Sbjct:   505 NRESPTESPSLVLLNAAKESV--LYEQPDGLSAYLGMQKQLITFKRADGVPLSGTLYLPA 562

Query:   422 GYDPSKDGHLLCLFWAYPGEFRSKDAAGQVRGSPNEF 458
              Y   + G L  L WAYP EF   + AGQ+  S N++
Sbjct:   563 NYT-KEQGTLPVLMWAYPREFNDPEVAGQISFSANQY 598


>TIGR_CMR|SO_1310 [details] [associations]
            symbol:SO_1310 "conserved hypothetical protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR001375 Pfam:PF00326 Gene3D:2.120.10.30
            InterPro:IPR011042 GO:GO:0006508 GO:GO:0008236 EMBL:AE014299
            GenomeReviews:AE014299_GR RefSeq:NP_716930.1
            ProteinModelPortal:Q8EHB8 DNASU:1169132 GeneID:1169132
            KEGG:son:SO_1310 PATRIC:23522278 HOGENOM:HOG000295385 OMA:FPIQSER
            ProtClustDB:CLSK891098 Uniprot:Q8EHB8
        Length = 801

 Score = 467 (169.5 bits), Expect = 1.2e-43, P = 1.2e-43
 Identities = 127/457 (27%), Positives = 214/457 (46%)

Query:     3 LNAVFG-SFVWVNSSVLLVYTIPLSRGDSPKKSLVPFGPKIQSNEQQNVIQNRYTEGLLK 61
             LN      + W N+  LL   + +++  S  +  V   PK +    +N  Q  Y + LLK
Sbjct:   160 LNGTISLDYQWANNKTLLARFV-IAQDISASQPHVSISPKTKETSGKNSPQRTYQD-LLK 217

Query:    62 DEFDEYLFEHYTTTQLVLATLDGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVS 121
                D+ LF   TT+QL L  L+G + + G P I      SPD +YIL   I  P+S  V 
Sbjct:   218 TSADKQLFSRLTTSQLALVDLEGKLTKIGAPGIIEDFSVSPDGQYILSRQITTPFSTQVK 277

Query:   122 YTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQ 181
             Y  FP   +++  +G+ +  L +    E+ P   +SV  G R+  W   + +TL + +  
Sbjct:   278 YDDFPTLTEIYNLNGQLITLLHQSQGGESRPQGKDSVLPGPRMFHWVQGQAATLAFTKAL 337

Query:   182 DGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQETWFKTTQ 241
             D G ++ +   RD ++    +P   ++   + +   R   + W ++ LAL+ E   K  Q
Sbjct:   338 DQGDSQRDAPQRDSLWL--LDPPFTQQATRVAQTQWRITDIDWAENHLALITERNSKAQQ 395

Query:   242 TRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILL 301
              R   ++    +++   L +R+  D Y D GL   +    G   +  ++ +  + T ++ 
Sbjct:   396 IRLSSLNTRLGESSLHTLNERNLRDKYQDLGL-FAKHYYPGKGQVVSLQ-QGAKTTGLIH 453

Query:   302 NGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILT 361
              G+GATP+GD PFL   ++ T     +W+S   +       LNLD          L+++ 
Sbjct:   454 YGQGATPQGDKPFLKRTSLITSESSLLWQSASNRLESVRYVLNLDP---------LQLII 504

Query:   362 SKESKTEITQYWIQSWPHKKCRQITDFPHPYPLLSTLQKELIKYQRKDGVQLTAKLYLPT 421
             ++ES TE     + +   +    + + P        +QK+LI ++R DGV L+  LYLP 
Sbjct:   505 NRESPTESPSLVLLNAAKESV--LYEQPDGLSAYLGMQKQLITFKRADGVPLSGTLYLPA 562

Query:   422 GYDPSKDGHLLCLFWAYPGEFRSKDAAGQVRGSPNEF 458
              Y   + G L  L WAYP EF   + AGQ+  S N++
Sbjct:   563 NYT-KEQGTLPVLMWAYPREFNDPEVAGQISFSANQY 598


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      459       459   0.00095  118 3  11 22  0.43    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  307 KB (2157 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  40.20u 0.13s 40.33t   Elapsed:  00:00:02
  Total cpu time:  40.20u 0.13s 40.33t   Elapsed:  00:00:02
  Start:  Sat May 11 01:18:39 2013   End:  Sat May 11 01:18:41 2013

Back to top