Query 012630
Match_columns 459
No_of_seqs 206 out of 619
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 13:11:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012630.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012630hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 99.9 2.2E-22 7.6E-27 220.4 32.5 329 73-441 90-512 (740)
2 3azo_A Aminopeptidase; POP fam 99.9 1.8E-20 6.2E-25 201.6 30.5 307 74-441 101-434 (662)
3 2ecf_A Dipeptidyl peptidase IV 99.9 8E-20 2.7E-24 199.0 32.7 336 63-440 117-526 (741)
4 2xdw_A Prolyl endopeptidase; a 99.8 1.4E-18 4.8E-23 189.2 35.0 319 74-440 97-475 (710)
5 2z3z_A Dipeptidyl aminopeptida 99.8 5.6E-19 1.9E-23 191.4 29.4 305 73-440 139-494 (706)
6 2bkl_A Prolyl endopeptidase; m 99.8 3.4E-18 1.1E-22 185.9 33.9 325 74-440 93-455 (695)
7 1z68_A Fibroblast activation p 99.8 3.6E-18 1.2E-22 185.6 31.0 312 73-442 128-507 (719)
8 1xfd_A DIP, dipeptidyl aminope 99.8 1E-18 3.4E-23 189.6 24.9 322 63-441 122-506 (723)
9 3iuj_A Prolyl endopeptidase; h 99.8 6.1E-17 2.1E-21 176.1 34.5 293 95-440 131-463 (693)
10 1yr2_A Prolyl oligopeptidase; 99.8 1E-16 3.4E-21 175.6 32.0 316 74-440 132-497 (741)
11 3o4h_A Acylamino-acid-releasin 99.8 4.2E-17 1.4E-21 173.0 23.4 274 75-442 90-371 (582)
12 2xe4_A Oligopeptidase B; hydro 99.7 2.8E-16 9.5E-21 172.5 26.2 293 75-440 201-518 (751)
13 2hqs_A Protein TOLB; TOLB, PAL 99.6 5.1E-13 1.7E-17 136.1 25.3 235 75-389 159-397 (415)
14 2gop_A Trilobed protease; beta 99.5 6.2E-13 2.1E-17 130.5 23.2 152 73-261 41-215 (347)
15 3pe7_A Oligogalacturonate lyas 99.5 3E-12 1E-16 127.5 22.6 259 74-390 59-340 (388)
16 3pe7_A Oligogalacturonate lyas 99.4 5.7E-11 1.9E-15 118.2 25.8 243 75-389 11-283 (388)
17 4a5s_A Dipeptidyl peptidase 4 99.4 1.2E-11 4.2E-16 135.0 21.9 125 75-234 36-188 (740)
18 2ojh_A Uncharacterized protein 99.4 2.7E-10 9.1E-15 107.5 25.3 236 73-387 20-266 (297)
19 3c5m_A Oligogalacturonate lyas 99.3 3.1E-11 1E-15 120.0 19.0 250 74-389 59-339 (396)
20 1xfd_A DIP, dipeptidyl aminope 99.3 2.7E-10 9.2E-15 123.2 27.4 268 74-387 90-404 (723)
21 1z68_A Fibroblast activation p 99.3 3.3E-11 1.1E-15 130.6 19.3 123 75-235 36-187 (719)
22 2hqs_A Protein TOLB; TOLB, PAL 99.3 1.2E-10 4.1E-15 118.5 22.1 192 75-331 203-396 (415)
23 2z3z_A Dipeptidyl aminopeptida 99.3 4.9E-10 1.7E-14 121.0 26.7 264 71-387 97-399 (706)
24 2ecf_A Dipeptidyl peptidase IV 99.3 1.9E-10 6.5E-15 124.9 23.1 215 95-388 111-377 (741)
25 3azo_A Aminopeptidase; POP fam 99.3 7.6E-10 2.6E-14 118.6 25.1 256 74-387 48-333 (662)
26 3c5m_A Oligogalacturonate lyas 99.2 2.5E-09 8.6E-14 106.0 24.8 203 73-328 166-390 (396)
27 4hvt_A Ritya.17583.B, post-pro 99.2 4.1E-09 1.4E-13 114.3 27.5 83 354-440 405-487 (711)
28 1k32_A Tricorn protease; prote 99.1 4E-09 1.4E-13 119.5 21.8 116 75-213 33-150 (1045)
29 1k32_A Tricorn protease; prote 99.0 1.5E-08 5.2E-13 114.8 23.7 236 73-388 224-470 (1045)
30 2ojh_A Uncharacterized protein 99.0 3.4E-08 1.1E-12 92.9 20.6 174 73-289 108-290 (297)
31 2gop_A Trilobed protease; beta 99.0 6.8E-08 2.3E-12 94.3 22.5 219 90-387 12-259 (347)
32 2xe4_A Oligopeptidase B; hydro 98.9 6.2E-08 2.1E-12 106.1 22.3 222 95-386 176-415 (751)
33 2bkl_A Prolyl endopeptidase; m 98.9 6E-08 2.1E-12 105.0 21.7 162 97-289 72-245 (695)
34 2xdw_A Prolyl endopeptidase; a 98.9 1.1E-07 3.8E-12 103.1 23.7 228 100-387 79-331 (710)
35 1yr2_A Prolyl oligopeptidase; 98.9 1.4E-07 4.9E-12 102.8 23.6 230 97-387 111-360 (741)
36 3o4h_A Acylamino-acid-releasin 98.8 1.4E-07 4.9E-12 99.4 18.9 182 75-326 46-231 (582)
37 3iuj_A Prolyl endopeptidase; h 98.8 3.1E-07 1.1E-11 99.5 20.4 156 75-253 155-316 (693)
38 1pby_B Quinohemoprotein amine 98.7 1.7E-05 5.7E-10 76.1 26.8 150 73-252 9-164 (337)
39 3s25_A Hypothetical 7-bladed b 98.7 1.1E-06 3.6E-11 85.6 18.2 226 74-387 36-263 (302)
40 3u4y_A Uncharacterized protein 98.6 8.3E-06 2.8E-10 78.6 24.6 135 74-249 19-160 (331)
41 1l0q_A Surface layer protein; 98.6 1.8E-05 6E-10 78.2 27.0 136 74-252 53-190 (391)
42 1l0q_A Surface layer protein; 98.6 1.6E-05 5.4E-10 78.5 26.4 136 74-252 11-148 (391)
43 3s25_A Hypothetical 7-bladed b 98.6 2.4E-06 8.3E-11 83.0 19.7 214 72-385 85-299 (302)
44 3hfq_A Uncharacterized protein 98.5 1.5E-05 5.1E-10 77.6 23.5 149 74-251 62-220 (347)
45 3vgz_A Uncharacterized protein 98.5 4.4E-05 1.5E-09 73.8 26.2 138 74-253 110-264 (353)
46 3vgz_A Uncharacterized protein 98.5 6.6E-05 2.2E-09 72.6 26.6 145 74-252 68-216 (353)
47 3hfq_A Uncharacterized protein 98.5 6.4E-05 2.2E-09 73.1 26.6 82 76-179 19-104 (347)
48 3u4y_A Uncharacterized protein 98.5 8.1E-05 2.8E-09 71.5 26.1 140 74-253 61-209 (331)
49 3bws_A Protein LP49; two-domai 98.4 0.00017 5.7E-09 72.1 28.8 137 75-252 144-293 (433)
50 3scy_A Hypothetical bacterial 98.4 1.9E-05 6.4E-10 77.4 20.2 170 96-328 158-345 (361)
51 1jmx_B Amine dehydrogenase; ox 98.3 0.00029 1E-08 67.7 25.9 149 74-253 20-177 (349)
52 1ri6_A Putative isomerase YBHE 98.3 0.00028 9.7E-09 67.5 24.7 136 77-251 64-211 (343)
53 3scy_A Hypothetical bacterial 98.1 6.6E-05 2.3E-09 73.5 16.5 130 92-253 210-341 (361)
54 1ri6_A Putative isomerase YBHE 98.0 0.0011 3.6E-08 63.4 23.3 143 74-251 105-264 (343)
55 3g4e_A Regucalcin; six bladed 98.0 0.0011 3.8E-08 63.2 22.6 143 74-249 34-178 (297)
56 3bws_A Protein LP49; two-domai 98.0 0.00039 1.3E-08 69.3 19.1 146 74-252 233-391 (433)
57 3zwl_B Eukaryotic translation 97.9 0.0095 3.3E-07 57.1 27.0 117 91-249 31-151 (369)
58 1pby_B Quinohemoprotein amine 97.8 0.00057 2E-08 65.1 17.1 141 74-252 114-270 (337)
59 2mad_H Methylamine dehydrogena 97.8 0.021 7.3E-07 56.5 28.8 93 76-179 48-143 (373)
60 3ei3_B DNA damage-binding prot 97.8 0.011 3.6E-07 57.8 26.2 137 74-252 140-283 (383)
61 2vdu_B TRNA (guanine-N(7)-)-me 97.8 0.02 6.9E-07 57.6 28.0 114 94-248 104-228 (450)
62 4ery_A WD repeat-containing pr 97.7 0.018 6E-07 54.5 25.6 131 75-251 45-180 (312)
63 1nir_A Nitrite reductase; hemo 97.7 0.003 1E-07 66.1 21.3 135 73-252 157-312 (543)
64 1nr0_A Actin interacting prote 97.7 0.0061 2.1E-07 64.4 23.8 135 75-247 39-177 (611)
65 1gxr_A ESG1, transducin-like e 97.6 0.0012 4.1E-08 62.7 15.6 130 74-247 204-335 (337)
66 4e54_B DNA damage-binding prot 97.6 0.0065 2.2E-07 61.0 21.7 131 75-247 187-325 (435)
67 4h5i_A Guanine nucleotide-exch 97.6 0.00049 1.7E-08 67.9 12.7 142 73-249 195-343 (365)
68 1jmx_B Amine dehydrogenase; ox 97.6 0.0014 4.7E-08 62.9 15.5 84 74-172 64-160 (349)
69 3ei3_B DNA damage-binding prot 97.6 0.0052 1.8E-07 60.1 19.8 133 75-248 96-235 (383)
70 2ymu_A WD-40 repeat protein; u 97.5 0.0011 3.8E-08 68.8 15.0 127 75-245 448-576 (577)
71 2j04_A TAU60, YPL007P, hypothe 97.5 0.00054 1.9E-08 71.7 12.4 65 90-178 83-147 (588)
72 1gxr_A ESG1, transducin-like e 97.5 0.0019 6.6E-08 61.3 15.4 132 74-251 162-296 (337)
73 4h5i_A Guanine nucleotide-exch 97.5 0.0021 7.3E-08 63.3 16.1 135 76-251 158-300 (365)
74 1jof_A Carboxy-CIS,CIS-muconat 97.5 0.0026 9E-08 62.4 16.0 65 93-178 145-210 (365)
75 3mkq_A Coatomer beta'-subunit; 97.4 0.021 7.4E-07 61.6 24.4 128 76-247 36-170 (814)
76 1qks_A Cytochrome CD1 nitrite 97.4 0.013 4.5E-07 61.6 21.0 77 74-178 176-261 (567)
77 4gqb_B Methylosome protein 50; 97.4 0.033 1.1E-06 54.3 22.5 133 75-252 103-247 (344)
78 3ow8_A WD repeat-containing pr 97.3 0.0041 1.4E-07 60.0 15.1 129 75-247 144-277 (321)
79 4aez_A CDC20, WD repeat-contai 97.3 0.15 5E-06 50.2 27.6 133 73-251 111-248 (401)
80 2ymu_A WD-40 repeat protein; u 97.3 0.0033 1.1E-07 65.1 15.1 127 76-246 408-536 (577)
81 1r5m_A SIR4-interacting protei 97.3 0.1 3.5E-06 50.8 25.1 60 92-178 108-167 (425)
82 1pgu_A Actin interacting prote 97.3 0.046 1.6E-06 56.5 23.4 135 74-246 38-189 (615)
83 2mad_H Methylamine dehydrogena 97.2 0.018 6.2E-07 57.1 19.2 136 96-253 216-352 (373)
84 3ow8_A WD repeat-containing pr 97.2 0.0047 1.6E-07 59.5 14.3 130 74-247 185-319 (321)
85 2ghs_A AGR_C_1268P; regucalcin 97.2 0.0048 1.6E-07 59.7 13.7 140 73-250 69-209 (326)
86 3e5z_A Putative gluconolactona 97.2 0.022 7.4E-07 53.7 17.9 146 73-250 48-201 (296)
87 4g56_B MGC81050 protein; prote 97.2 0.0052 1.8E-07 60.2 14.0 134 75-250 204-344 (357)
88 4e54_B DNA damage-binding prot 97.1 0.012 4.2E-07 59.0 16.5 134 74-248 141-281 (435)
89 3vl1_A 26S proteasome regulato 97.1 0.0098 3.3E-07 58.7 15.5 77 74-177 118-198 (420)
90 4gqb_B Methylosome protein 50; 97.1 0.009 3.1E-07 58.4 14.8 133 75-249 192-331 (344)
91 4aez_A CDC20, WD repeat-contai 97.1 0.011 3.9E-07 58.4 15.7 136 74-248 195-335 (401)
92 1got_B GT-beta; complex (GTP-b 97.1 0.012 4E-07 57.0 15.4 129 75-245 206-339 (340)
93 1nir_A Nitrite reductase; hemo 97.1 0.17 5.7E-06 52.7 25.2 242 74-383 247-518 (543)
94 3zwl_B Eukaryotic translation 97.1 0.013 4.3E-07 56.2 15.5 142 74-248 196-345 (369)
95 1jof_A Carboxy-CIS,CIS-muconat 97.1 0.0095 3.3E-07 58.3 14.8 149 76-252 61-227 (365)
96 2pbi_B Guanine nucleotide-bind 97.0 0.012 4E-07 57.5 15.4 131 75-245 220-353 (354)
97 2dg1_A DRP35, lactonase; beta 97.0 0.013 4.4E-07 56.1 15.4 145 73-250 64-212 (333)
98 3dwl_C Actin-related protein 2 97.0 0.0057 2E-07 59.5 13.0 116 92-248 55-176 (377)
99 1sq9_A Antiviral protein SKI8; 97.0 0.013 4.4E-07 57.3 15.4 147 74-248 206-394 (397)
100 4ery_A WD repeat-containing pr 97.0 0.23 7.9E-06 46.6 25.8 114 92-251 23-138 (312)
101 3fm0_A Protein CIAO1; WDR39,SG 97.0 0.011 3.9E-07 57.3 14.8 116 92-248 61-180 (345)
102 2oiz_A Aromatic amine dehydrog 97.0 0.31 1.1E-05 47.5 27.1 93 74-178 30-125 (361)
103 1sq9_A Antiviral protein SKI8; 97.0 0.2 6.7E-06 48.6 23.5 142 74-252 90-268 (397)
104 4gga_A P55CDC, cell division c 96.9 0.36 1.2E-05 47.7 27.7 131 74-248 124-260 (420)
105 3vu4_A KMHSV2; beta-propeller 96.9 0.019 6.4E-07 56.1 15.8 79 74-177 158-257 (355)
106 1nr0_A Actin interacting prote 96.9 0.006 2E-07 64.4 12.8 130 76-247 471-609 (611)
107 1erj_A Transcriptional repress 96.9 0.018 6.3E-07 56.8 15.7 109 95-246 126-235 (393)
108 3frx_A Guanine nucleotide-bind 96.9 0.02 6.9E-07 54.8 15.4 129 75-248 176-316 (319)
109 3dwl_C Actin-related protein 2 96.9 0.0065 2.2E-07 59.1 12.1 113 94-247 13-129 (377)
110 3iz6_a 40S ribosomal protein R 96.9 0.016 5.5E-07 57.0 14.7 120 92-248 249-374 (380)
111 3v65_B Low-density lipoprotein 96.9 0.18 6.1E-06 50.0 22.4 139 71-251 92-234 (386)
112 1erj_A Transcriptional repress 96.8 0.012 4.2E-07 58.1 13.1 125 90-246 62-193 (393)
113 1pgu_A Actin interacting prote 96.8 0.016 5.5E-07 60.0 14.5 132 74-249 466-614 (615)
114 2xzm_R RACK1; ribosome, transl 96.8 0.036 1.2E-06 53.5 16.0 133 75-247 98-242 (343)
115 3dsm_A Uncharacterized protein 96.7 0.23 7.7E-06 47.7 21.5 142 74-252 63-213 (328)
116 1k8k_C P40, ARP2/3 complex 41 96.7 0.011 3.9E-07 56.9 12.0 116 93-249 9-127 (372)
117 3vl1_A 26S proteasome regulato 96.7 0.024 8.3E-07 55.8 14.5 130 75-246 78-209 (420)
118 1k8k_C P40, ARP2/3 complex 41 96.7 0.02 6.7E-07 55.2 13.5 132 76-248 31-172 (372)
119 3fm0_A Protein CIAO1; WDR39,SG 96.7 0.016 5.6E-07 56.1 12.8 116 94-249 18-136 (345)
120 3mkq_A Coatomer beta'-subunit; 96.6 0.014 4.8E-07 63.1 13.3 112 92-247 13-126 (814)
121 2dg1_A DRP35, lactonase; beta 96.6 0.14 4.7E-06 48.7 18.9 122 94-252 46-172 (333)
122 3g4e_A Regucalcin; six bladed 96.6 0.079 2.7E-06 50.1 16.7 112 95-250 15-138 (297)
123 1r5m_A SIR4-interacting protei 96.6 0.033 1.1E-06 54.4 14.3 131 73-248 225-360 (425)
124 1npe_A Nidogen, entactin; glyc 96.5 0.24 8.2E-06 45.7 19.6 138 73-251 56-198 (267)
125 3dr2_A Exported gluconolactona 96.5 0.087 3E-06 49.9 16.9 128 83-253 34-180 (305)
126 2aq5_A Coronin-1A; WD40 repeat 96.5 0.05 1.7E-06 53.5 15.2 138 73-248 152-298 (402)
127 3v64_C Agrin; beta propeller, 96.5 0.45 1.5E-05 46.3 21.9 137 73-251 51-191 (349)
128 3hrp_A Uncharacterized protein 96.5 0.72 2.4E-05 45.9 23.8 136 76-251 153-298 (409)
129 2ghs_A AGR_C_1268P; regucalcin 96.5 0.13 4.3E-06 49.5 17.6 120 85-248 39-167 (326)
130 1got_B GT-beta; complex (GTP-b 96.5 0.059 2E-06 51.9 15.3 128 75-246 164-298 (340)
131 3jrp_A Fusion protein of prote 96.4 0.11 3.8E-06 49.7 17.0 134 74-249 78-240 (379)
132 2pm9_A Protein WEB1, protein t 96.4 0.028 9.5E-07 55.1 12.8 132 75-251 45-197 (416)
133 3dw8_B Serine/threonine-protei 96.4 0.043 1.5E-06 54.4 14.2 119 92-247 177-313 (447)
134 2j04_A TAU60, YPL007P, hypothe 96.4 0.037 1.3E-06 57.9 13.8 108 95-247 132-252 (588)
135 3c75_H MADH, methylamine dehyd 96.3 0.75 2.6E-05 46.3 22.7 93 75-178 99-194 (426)
136 3lrv_A PRE-mRNA-splicing facto 96.3 0.043 1.5E-06 52.8 13.1 132 73-247 102-242 (343)
137 3dm0_A Maltose-binding peripla 96.3 0.067 2.3E-06 57.1 15.6 74 75-176 541-618 (694)
138 2aq5_A Coronin-1A; WD40 repeat 96.2 0.035 1.2E-06 54.7 12.4 141 74-251 56-207 (402)
139 2ynn_A Coatomer subunit beta'; 96.2 0.058 2E-06 51.0 13.5 113 92-248 13-127 (304)
140 2xzm_R RACK1; ribosome, transl 96.2 0.06 2.1E-06 51.8 13.8 58 92-176 213-271 (343)
141 4aow_A Guanine nucleotide-bind 96.2 0.12 4.1E-06 48.8 15.4 128 76-249 196-337 (340)
142 3p5b_L Low density lipoprotein 96.2 1.2 4E-05 44.2 25.6 139 71-251 88-234 (400)
143 3v65_B Low-density lipoprotein 96.2 0.33 1.1E-05 48.1 19.0 137 73-251 136-277 (386)
144 3v64_C Agrin; beta propeller, 96.1 0.47 1.6E-05 46.2 19.9 136 74-251 94-234 (349)
145 3lrv_A PRE-mRNA-splicing facto 96.1 0.072 2.4E-06 51.2 13.8 133 74-249 148-292 (343)
146 4g56_B MGC81050 protein; prote 96.1 0.085 2.9E-06 51.3 14.5 133 75-252 115-259 (357)
147 1n7d_A LDL receptor, low-densi 96.1 0.24 8.1E-06 53.3 19.1 137 73-251 384-528 (699)
148 2hes_X YDR267CP; beta-propelle 96.1 0.15 5E-06 48.9 15.9 118 92-248 58-183 (330)
149 3dr2_A Exported gluconolactona 96.0 0.058 2E-06 51.2 12.5 151 73-251 65-224 (305)
150 3sfz_A APAF-1, apoptotic pepti 96.0 0.024 8.1E-07 64.7 11.3 136 75-247 1107-1247(1249)
151 2ece_A 462AA long hypothetical 96.0 0.22 7.7E-06 50.4 17.0 95 73-179 162-271 (462)
152 3i2n_A WD repeat-containing pr 96.0 0.024 8.3E-07 54.1 9.7 84 74-179 189-278 (357)
153 2xyi_A Probable histone-bindin 96.0 0.085 2.9E-06 52.7 14.1 136 73-248 252-409 (430)
154 3frx_A Guanine nucleotide-bind 96.0 0.47 1.6E-05 45.0 18.8 128 76-248 130-266 (319)
155 1vlq_A Acetyl xylan esterase; 96.0 0.00039 1.3E-08 67.4 -3.3 81 357-441 21-105 (337)
156 3jrp_A Fusion protein of prote 96.0 0.039 1.3E-06 53.0 11.2 116 92-248 11-133 (379)
157 3c75_H MADH, methylamine dehyd 96.0 0.12 4.1E-06 52.2 14.8 135 97-253 269-404 (426)
158 3mmy_A MRNA export factor; mRN 95.9 0.088 3E-06 50.1 13.3 115 92-252 39-161 (368)
159 1n7d_A LDL receptor, low-densi 95.9 0.21 7.2E-06 53.7 17.5 114 96-251 456-571 (699)
160 3e5z_A Putative gluconolactona 95.8 0.16 5.4E-06 47.6 14.4 128 75-252 153-287 (296)
161 3dm0_A Maltose-binding peripla 95.8 0.13 4.4E-06 54.8 15.4 136 74-247 451-590 (694)
162 3sfz_A APAF-1, apoptotic pepti 95.8 0.11 3.8E-06 59.1 15.8 131 75-247 637-772 (1249)
163 1npe_A Nidogen, entactin; glyc 95.8 1.1 3.8E-05 41.0 25.7 137 74-251 9-155 (267)
164 2pm7_B Protein transport prote 95.8 0.09 3.1E-06 49.5 12.5 116 92-248 9-131 (297)
165 3dw8_B Serine/threonine-protei 95.8 0.074 2.5E-06 52.6 12.2 88 74-176 197-301 (447)
166 2qm0_A BES; alpha-beta structu 95.7 0.017 5.7E-07 54.4 6.9 44 395-440 13-57 (275)
167 1ijq_A LDL receptor, low-densi 95.7 1.5 5.1E-05 41.8 21.7 137 73-251 8-152 (316)
168 1vyh_C Platelet-activating fac 95.7 0.14 4.8E-06 50.8 14.1 129 75-247 130-263 (410)
169 3k26_A Polycomb protein EED; W 95.7 0.13 4.5E-06 48.9 13.4 111 93-247 70-190 (366)
170 2oaj_A Protein SNI1; WD40 repe 95.6 0.14 4.8E-06 56.8 15.0 139 75-247 79-240 (902)
171 4ao6_A Esterase; hydrolase, th 95.5 0.011 3.6E-07 55.3 4.6 63 370-440 3-65 (259)
172 2vdu_B TRNA (guanine-N(7)-)-me 95.5 0.16 5.4E-06 50.9 13.7 131 74-247 170-337 (450)
173 2pbi_B Guanine nucleotide-bind 95.5 1.9 6.5E-05 41.4 26.9 115 91-247 63-183 (354)
174 3f3f_A Nucleoporin SEH1; struc 95.4 0.19 6.4E-06 47.0 13.2 115 92-247 11-141 (351)
175 4gga_A P55CDC, cell division c 95.4 0.37 1.3E-05 47.6 15.9 117 92-248 276-394 (420)
176 3dsm_A Uncharacterized protein 95.4 0.31 1.1E-05 46.7 14.9 144 74-250 151-301 (328)
177 3m0c_C LDL receptor, low-densi 95.4 4 0.00014 44.4 26.9 138 72-251 401-546 (791)
178 2pm9_A Protein WEB1, protein t 95.3 0.29 1E-05 47.6 14.6 144 74-252 135-295 (416)
179 2pm7_B Protein transport prote 95.3 0.34 1.2E-05 45.4 14.6 119 92-250 145-286 (297)
180 2oit_A Nucleoporin 214KDA; NH2 95.3 0.078 2.7E-06 53.5 10.5 124 92-250 92-222 (434)
181 3sov_A LRP-6, low-density lipo 95.3 2.2 7.5E-05 40.8 22.3 137 73-251 11-154 (318)
182 3odt_A Protein DOA1; ubiquitin 95.3 0.29 9.8E-06 45.4 13.8 110 92-248 184-295 (313)
183 3i2n_A WD repeat-containing pr 95.3 0.45 1.5E-05 45.0 15.5 135 74-248 89-242 (357)
184 3sov_A LRP-6, low-density lipo 95.2 1.8 6.3E-05 41.4 19.9 114 96-251 82-197 (318)
185 1gkl_A Endo-1,4-beta-xylanase 95.2 0.025 8.6E-07 54.1 6.4 42 396-440 37-78 (297)
186 1yfq_A Cell cycle arrest prote 95.2 0.071 2.4E-06 50.5 9.6 60 91-176 55-116 (342)
187 2oiz_A Aromatic amine dehydrog 95.2 0.18 6E-06 49.4 12.7 115 127-252 221-335 (361)
188 1ijq_A LDL receptor, low-densi 95.2 2.2 7.6E-05 40.5 20.4 136 74-251 51-195 (316)
189 3no2_A Uncharacterized protein 95.1 2.2 7.5E-05 39.7 20.0 131 74-250 14-154 (276)
190 3doh_A Esterase; alpha-beta hy 95.0 0.03 1E-06 55.4 6.4 42 398-441 142-184 (380)
191 2xyi_A Probable histone-bindin 95.0 0.47 1.6E-05 47.1 15.3 137 74-249 203-353 (430)
192 2oaj_A Protein SNI1; WD40 repe 95.0 0.22 7.5E-06 55.2 13.9 116 87-247 12-127 (902)
193 3bg1_A Protein SEC13 homolog; 94.9 0.14 4.7E-06 48.8 10.7 116 92-248 13-135 (316)
194 2hes_X YDR267CP; beta-propelle 94.9 0.24 8.1E-06 47.4 12.5 116 92-248 107-229 (330)
195 3jro_A Fusion protein of prote 94.9 0.16 5.4E-06 55.0 12.1 116 92-248 9-131 (753)
196 3m0c_C LDL receptor, low-densi 94.8 2.4 8.2E-05 46.2 21.3 114 96-251 474-589 (791)
197 2oit_A Nucleoporin 214KDA; NH2 94.8 0.54 1.8E-05 47.2 15.2 99 92-232 149-256 (434)
198 2ynn_A Coatomer subunit beta'; 94.8 2.6 9E-05 39.3 25.8 111 93-247 56-170 (304)
199 1vyh_C Platelet-activating fac 94.8 0.65 2.2E-05 45.9 15.6 128 75-246 256-408 (410)
200 4a11_B DNA excision repair pro 94.8 3 0.0001 39.8 26.0 79 74-179 121-205 (408)
201 4a11_B DNA excision repair pro 94.7 0.32 1.1E-05 47.0 12.8 126 73-227 23-152 (408)
202 3f3f_A Nucleoporin SEH1; struc 94.5 0.65 2.2E-05 43.2 14.3 144 74-248 80-248 (351)
203 1yfq_A Cell cycle arrest prote 94.5 0.28 9.4E-06 46.3 11.6 112 92-246 11-128 (342)
204 3hrp_A Uncharacterized protein 94.4 1.1 3.7E-05 44.6 16.2 138 76-252 195-355 (409)
205 4aow_A Guanine nucleotide-bind 94.0 3.3 0.00011 38.5 18.1 104 92-235 171-275 (340)
206 3bg1_A Protein SEC13 homolog; 93.9 0.65 2.2E-05 43.9 12.9 101 126-250 188-294 (316)
207 3jro_A Fusion protein of prote 93.9 0.57 2E-05 50.5 13.8 117 92-249 53-189 (753)
208 4ggc_A P55CDC, cell division c 93.9 1.8 6.1E-05 40.0 15.7 117 92-247 196-313 (318)
209 2gzs_A IROE protein; enterobac 93.8 0.078 2.7E-06 50.0 6.0 42 396-439 9-51 (278)
210 2ece_A 462AA long hypothetical 93.8 1.3 4.3E-05 44.9 15.1 98 73-178 226-338 (462)
211 3fvz_A Peptidyl-glycine alpha- 93.8 1.6 5.6E-05 41.4 15.7 144 73-252 67-228 (329)
212 3p5b_L Low density lipoprotein 93.8 5.7 0.00019 39.2 23.1 114 96-251 162-277 (400)
213 3iz6_a 40S ribosomal protein R 93.6 1.4 4.9E-05 42.7 15.1 131 75-251 180-329 (380)
214 1q7f_A NHL, brain tumor CG1071 93.6 2 6.9E-05 39.4 15.4 132 75-248 142-279 (286)
215 3k26_A Polycomb protein EED; W 93.5 1.4 4.7E-05 41.6 14.5 120 92-247 18-145 (366)
216 4a0p_A LRP6, LRP-6, low-densit 93.4 9 0.00031 40.4 22.4 139 72-252 12-156 (628)
217 3mmy_A MRNA export factor; mRN 93.3 0.74 2.5E-05 43.5 12.2 76 74-176 63-145 (368)
218 2qe8_A Uncharacterized protein 93.2 1.1 3.6E-05 43.2 13.2 154 74-252 92-279 (343)
219 4a0p_A LRP6, LRP-6, low-densit 93.0 10 0.00035 39.9 22.0 137 74-252 58-198 (628)
220 2iwa_A Glutamine cyclotransfer 93.0 0.94 3.2E-05 42.5 12.0 135 73-250 84-236 (266)
221 3ls2_A S-formylglutathione hyd 93.0 0.098 3.4E-06 48.5 5.2 41 398-440 13-54 (280)
222 3no2_A Uncharacterized protein 92.9 3 0.0001 38.8 15.6 137 76-252 57-196 (276)
223 3vu4_A KMHSV2; beta-propeller 92.9 1.4 4.7E-05 42.5 13.6 73 159-249 195-271 (355)
224 1jjf_A Xylanase Z, endo-1,4-be 92.8 0.17 5.7E-06 46.8 6.5 44 396-441 28-72 (268)
225 1q7f_A NHL, brain tumor CG1071 92.7 2.8 9.6E-05 38.4 15.0 134 74-250 99-237 (286)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 92.6 2.7 9.3E-05 38.8 14.9 145 74-250 45-206 (314)
227 3nuz_A Putative acetyl xylan e 92.5 0.099 3.4E-06 52.1 4.8 42 397-442 89-130 (398)
228 4ggc_A P55CDC, cell division c 92.4 2.5 8.6E-05 38.9 14.3 52 74-138 44-100 (318)
229 3nol_A Glutamine cyclotransfer 92.3 1.7 6E-05 40.5 12.7 133 73-249 105-254 (262)
230 3gre_A Serine/threonine-protei 91.9 1.6 5.6E-05 42.7 13.0 123 91-247 110-243 (437)
231 1qks_A Cytochrome CD1 nitrite 91.9 13 0.00045 38.5 25.0 146 75-252 218-374 (567)
232 2g8s_A Glucose/sorbosone dehyd 91.9 1 3.4E-05 43.9 11.1 129 96-251 21-173 (353)
233 3tc9_A Hypothetical hydrolase; 91.8 2.1 7E-05 42.9 13.7 135 75-250 159-300 (430)
234 3v7d_B Cell division control p 91.8 2.5 8.7E-05 41.7 14.3 130 74-252 289-422 (464)
235 3gre_A Serine/threonine-protei 91.6 2 6.9E-05 42.1 13.2 51 75-138 192-247 (437)
236 1rwi_B Serine/threonine-protei 91.6 5 0.00017 36.1 15.1 132 74-251 45-180 (270)
237 2j04_B YDR362CP, TAU91; beta p 91.6 0.85 2.9E-05 47.1 10.7 131 75-246 287-425 (524)
238 3i6y_A Esterase APC40077; lipa 91.5 0.15 5.1E-06 47.2 4.4 41 398-440 15-56 (280)
239 3sjl_D Methylamine dehydrogena 91.4 1.3 4.6E-05 43.8 11.4 82 163-253 283-365 (386)
240 1rwi_B Serine/threonine-protei 91.2 6.8 0.00023 35.2 15.6 111 95-250 152-263 (270)
241 2iwa_A Glutamine cyclotransfer 91.1 2.7 9.1E-05 39.4 12.6 133 73-253 42-183 (266)
242 2j04_B YDR362CP, TAU91; beta p 91.1 0.47 1.6E-05 49.1 8.1 119 92-250 397-518 (524)
243 2w18_A PALB2, fancn, partner a 91.1 3.8 0.00013 40.0 14.0 26 220-247 330-355 (356)
244 3a9g_A Putative uncharacterize 91.0 2.7 9.2E-05 40.9 13.2 160 68-249 42-229 (354)
245 3g8y_A SUSD/RAGB-associated es 91.0 0.2 6.7E-06 49.7 5.0 41 398-442 85-125 (391)
246 3nok_A Glutaminyl cyclase; bet 91.0 2.7 9.3E-05 39.3 12.4 133 73-249 114-264 (268)
247 2qe8_A Uncharacterized protein 90.9 6.3 0.00022 37.5 15.7 87 75-178 42-137 (343)
248 2hdw_A Hypothetical protein PA 90.9 0.37 1.3E-05 46.3 6.7 43 396-441 64-106 (367)
249 3tc9_A Hypothetical hydrolase; 90.8 4.1 0.00014 40.7 14.6 115 96-252 140-258 (430)
250 1pjx_A Dfpase, DIISOPROPYLFLUO 90.8 3.6 0.00012 38.0 13.5 135 75-251 153-299 (314)
251 2fp8_A Strictosidine synthase; 90.7 5.4 0.00018 37.5 14.8 145 76-250 102-268 (322)
252 3s94_A LRP-6, low-density lipo 90.3 12 0.00043 39.2 18.5 140 70-251 13-159 (619)
253 3odt_A Protein DOA1; ubiquitin 90.2 4.4 0.00015 37.0 13.4 113 92-252 142-256 (313)
254 2b9v_A Alpha-amino acid ester 89.6 0.35 1.2E-05 51.5 5.8 37 398-439 35-71 (652)
255 3sjl_D Methylamine dehydrogena 89.6 0.63 2.2E-05 46.2 7.2 59 74-143 310-371 (386)
256 2jbw_A Dhpon-hydrolase, 2,6-di 89.5 0.16 5.6E-06 49.9 2.9 76 358-440 84-161 (386)
257 3nol_A Glutamine cyclotransfer 89.5 3.7 0.00012 38.3 11.9 130 75-253 65-203 (262)
258 1fwx_A Nitrous oxide reductase 89.4 2.7 9.3E-05 43.9 12.0 81 75-171 254-342 (595)
259 1mda_H Methylamine dehydrogena 89.3 0.53 1.8E-05 46.4 6.4 92 76-178 47-141 (368)
260 4gq1_A NUP37; propeller, trans 89.1 2.5 8.7E-05 41.2 11.4 59 92-176 136-203 (393)
261 1mpx_A Alpha-amino acid ester 89.0 0.42 1.4E-05 50.5 5.8 37 398-439 23-59 (615)
262 3fvz_A Peptidyl-glycine alpha- 89.0 13 0.00043 35.0 16.0 119 95-250 198-321 (329)
263 3iii_A COCE/NOND family hydrol 88.4 0.5 1.7E-05 49.4 5.8 40 397-441 38-79 (560)
264 3das_A Putative oxidoreductase 88.2 8.6 0.00029 37.3 14.2 159 65-249 42-233 (347)
265 1l7a_A Cephalosporin C deacety 88.1 0.43 1.5E-05 44.5 4.7 41 396-441 52-92 (318)
266 2ism_A Putative oxidoreductase 87.7 5.8 0.0002 38.3 12.7 123 96-251 34-178 (352)
267 3s94_A LRP-6, low-density lipo 87.6 30 0.001 36.2 23.2 114 97-252 396-511 (619)
268 1mda_H Methylamine dehydrogena 87.4 2.4 8.1E-05 41.7 9.7 116 127-252 231-347 (368)
269 4b6g_A Putative esterase; hydr 87.3 0.71 2.4E-05 42.7 5.6 40 399-441 21-61 (283)
270 2ism_A Putative oxidoreductase 87.2 9.3 0.00032 36.8 13.9 156 74-249 50-239 (352)
271 2fp8_A Strictosidine synthase; 86.6 10 0.00035 35.5 13.6 126 96-251 83-216 (322)
272 3fcy_A Xylan esterase 1; alpha 86.6 0.65 2.2E-05 44.4 5.1 41 396-441 78-118 (346)
273 4hw6_A Hypothetical protein, I 86.2 9 0.00031 38.2 13.5 134 75-250 162-303 (433)
274 3gff_A IROE-like serine hydrol 85.8 0.68 2.3E-05 44.9 4.7 42 397-439 9-51 (331)
275 3qqz_A Putative uncharacterize 85.8 17 0.00057 33.6 14.1 45 86-142 19-64 (255)
276 2uz0_A Esterase, tributyrin es 85.4 0.91 3.1E-05 41.1 5.2 41 399-441 6-51 (263)
277 1cru_A Protein (soluble quinop 85.4 15 0.00052 36.8 14.8 83 160-249 144-259 (454)
278 3a9g_A Putative uncharacterize 85.4 4.5 0.00015 39.2 10.5 124 96-251 32-178 (354)
279 2ovr_B FBW7, F-BOX/WD repeat p 85.3 12 0.00041 36.6 13.9 35 216-250 407-441 (445)
280 3nok_A Glutaminyl cyclase; bet 85.2 7.5 0.00026 36.3 11.3 127 77-253 77-212 (268)
281 4gq1_A NUP37; propeller, trans 84.7 7 0.00024 37.9 11.7 38 195-235 340-378 (393)
282 2p4o_A Hypothetical protein; p 84.6 22 0.00074 33.0 14.7 119 88-251 27-147 (306)
283 3mbr_X Glutamine cyclotransfer 84.4 19 0.00065 33.0 13.6 58 74-143 42-102 (243)
284 1lns_A X-prolyl dipeptidyl ami 84.4 0.26 9E-06 53.6 1.1 29 406-439 179-209 (763)
285 3e4d_A Esterase D; S-formylglu 84.2 0.79 2.7E-05 42.0 4.2 40 398-440 13-53 (278)
286 3fcx_A FGH, esterase D, S-form 83.9 0.83 2.9E-05 41.9 4.2 41 399-442 15-56 (282)
287 3f67_A Putative dienelactone h 83.2 1.4 4.7E-05 39.1 5.3 38 398-440 4-41 (241)
288 1xip_A Nucleoporin NUP159; bet 82.9 1.7 6E-05 43.0 6.3 86 73-180 144-234 (388)
289 3qh4_A Esterase LIPW; structur 82.6 1.8 6.3E-05 41.0 6.2 41 396-442 56-96 (317)
290 3sre_A PON1, serum paraoxonase 82.4 18 0.0006 35.2 13.2 149 73-250 81-251 (355)
291 4hw6_A Hypothetical protein, I 81.5 44 0.0015 33.1 16.3 114 96-252 142-260 (433)
292 3das_A Putative oxidoreductase 81.3 16 0.00056 35.3 12.5 124 96-251 35-183 (347)
293 3c8d_A Enterochelin esterase; 81.0 1.5 5.3E-05 43.5 5.2 42 397-441 165-207 (403)
294 3ebl_A Gibberellin receptor GI 80.8 2.2 7.7E-05 41.5 6.2 45 396-442 60-123 (365)
295 3kya_A Putative phosphatase; s 80.4 15 0.00052 37.4 12.4 137 75-250 162-340 (496)
296 2g8s_A Glucose/sorbosone dehyd 80.2 12 0.00041 36.1 11.2 158 73-249 37-229 (353)
297 2hm7_A Carboxylesterase; alpha 80.0 2.4 8.3E-05 39.6 6.0 40 396-440 44-83 (310)
298 2z2n_A Virginiamycin B lyase; 79.9 33 0.0011 30.7 15.3 130 74-249 77-211 (299)
299 3i2k_A Cocaine esterase; alpha 79.1 2.2 7.4E-05 44.7 5.7 39 398-441 7-47 (587)
300 4fol_A FGH, S-formylglutathion 79.0 1.7 5.7E-05 41.5 4.4 43 397-439 11-57 (299)
301 3h2g_A Esterase; xanthomonas o 78.8 1.7 5.7E-05 42.8 4.5 45 397-443 43-91 (397)
302 2o7r_A CXE carboxylesterase; a 78.6 2.7 9.1E-05 40.0 5.8 80 358-442 9-94 (338)
303 2fuk_A XC6422 protein; A/B hyd 76.6 3.6 0.00012 35.7 5.8 38 398-439 8-45 (220)
304 1cru_A Protein (soluble quinop 75.6 20 0.00069 35.9 11.6 118 96-234 30-161 (454)
305 2o2g_A Dienelactone hydrolase; 75.3 3.8 0.00013 35.4 5.5 36 398-441 10-45 (223)
306 3d0k_A Putative poly(3-hydroxy 74.8 1.5 5.2E-05 41.0 2.8 40 399-442 23-65 (304)
307 2wir_A Pesta, alpha/beta hydro 74.7 3.6 0.00012 38.5 5.4 40 396-441 47-86 (313)
308 2i3d_A AGR_C_3351P, hypothetic 73.4 3.1 0.00011 37.4 4.5 34 399-439 22-55 (249)
309 2p9w_A MAL S 1 allergenic prot 73.3 67 0.0023 30.8 14.0 156 73-251 33-215 (334)
310 3ain_A 303AA long hypothetical 73.2 4.6 0.00016 38.4 5.9 41 396-442 61-101 (323)
311 3v7d_B Cell division control p 73.0 70 0.0024 30.9 26.7 51 74-138 141-194 (464)
312 1lzl_A Heroin esterase; alpha/ 72.9 3.7 0.00012 38.7 5.1 43 396-442 47-90 (323)
313 1jkm_A Brefeldin A esterase; s 72.3 5.7 0.00019 38.3 6.4 43 397-443 79-121 (361)
314 3ga7_A Acetyl esterase; phosph 71.5 3.9 0.00013 38.6 4.9 38 398-442 61-98 (326)
315 2c7b_A Carboxylesterase, ESTE1 69.3 5.5 0.00019 37.1 5.4 41 396-442 44-84 (311)
316 3qqz_A Putative uncharacterize 69.2 69 0.0024 29.3 13.6 119 94-250 122-252 (255)
317 2p4o_A Hypothetical protein; p 68.6 24 0.00082 32.7 9.8 73 161-252 33-105 (306)
318 1xip_A Nucleoporin NUP159; bet 67.7 48 0.0016 32.5 12.0 90 126-249 145-253 (388)
319 2w18_A PALB2, fancn, partner a 67.4 5.4 0.00018 38.9 4.8 47 75-134 305-355 (356)
320 2z2n_A Virginiamycin B lyase; 67.2 68 0.0023 28.5 15.4 129 75-249 36-169 (299)
321 4ezi_A Uncharacterized protein 67.1 4.9 0.00017 39.5 4.6 42 397-442 40-85 (377)
322 2qc5_A Streptogramin B lactona 67.0 69 0.0024 28.5 16.1 130 75-250 125-259 (300)
323 1fwx_A Nitrous oxide reductase 65.6 25 0.00085 36.7 9.7 108 98-235 90-214 (595)
324 3bjr_A Putative carboxylestera 63.1 4.9 0.00017 36.7 3.6 45 394-441 13-60 (283)
325 3sre_A PON1, serum paraoxonase 61.1 6.4 0.00022 38.4 4.1 50 73-135 201-251 (355)
326 2qc5_A Streptogramin B lactona 60.9 90 0.0031 27.7 15.3 129 75-249 83-216 (300)
327 3bxp_A Putative lipase/esteras 58.6 12 0.00041 33.7 5.4 39 399-440 3-44 (277)
328 3hxk_A Sugar hydrolase; alpha- 57.8 5.8 0.0002 36.0 3.0 38 401-440 15-52 (276)
329 3mve_A FRSA, UPF0255 protein V 56.2 14 0.00049 36.4 5.8 38 398-441 166-203 (415)
330 3amr_A 3-phytase; beta-propell 55.5 1.5E+02 0.0051 28.6 18.3 62 74-144 49-118 (355)
331 3zwu_A Alkaline phosphatase PH 53.2 38 0.0013 35.3 8.6 73 97-184 480-553 (592)
332 2ovr_B FBW7, F-BOX/WD repeat p 52.2 1.1E+02 0.0036 29.5 11.5 79 74-176 338-423 (445)
333 2wg3_C Hedgehog-interacting pr 51.9 1E+02 0.0036 30.8 11.5 140 96-251 17-186 (463)
334 2h7c_A Liver carboxylesterase 50.3 14 0.00047 38.2 4.7 35 407-445 95-129 (542)
335 4a9v_A PHOX; hydrolase, beta-p 49.9 13 0.00043 38.8 4.2 42 73-115 507-552 (592)
336 3zwu_A Alkaline phosphatase PH 49.0 11 0.00036 39.5 3.6 42 73-115 507-552 (592)
337 2zsh_A Probable gibberellin re 46.6 30 0.001 32.7 6.3 45 396-442 68-124 (351)
338 3kya_A Putative phosphatase; s 46.3 1.1E+02 0.0039 30.9 10.7 121 96-250 142-277 (496)
339 1p22_A F-BOX/WD-repeat protein 42.1 2.3E+02 0.008 26.9 14.1 48 75-137 153-203 (435)
340 3trd_A Alpha/beta hydrolase; c 39.3 27 0.00092 29.7 4.2 23 399-422 5-27 (208)
341 1thg_A Lipase; hydrolase(carbo 37.5 31 0.0011 35.4 5.0 38 406-447 101-138 (544)
342 1llf_A Lipase 3; candida cylin 37.5 29 0.00098 35.6 4.7 37 406-446 93-129 (534)
343 3pfb_A Cinnamoyl esterase; alp 37.2 36 0.0012 30.0 4.9 36 399-441 21-56 (270)
344 3pe6_A Monoglyceride lipase; a 34.7 45 0.0016 29.5 5.2 32 404-441 21-52 (303)
345 3hju_A Monoglyceride lipase; a 34.0 33 0.0011 31.7 4.2 37 399-441 33-70 (342)
346 3fak_A Esterase/lipase, ESTE5; 33.7 15 0.0005 34.6 1.6 34 404-442 58-91 (322)
347 1jji_A Carboxylesterase; alpha 32.9 42 0.0014 31.1 4.7 36 399-442 55-90 (311)
348 3dte_A IRRE protein; radiotole 32.8 24 0.0008 33.5 2.8 30 408-441 244-273 (301)
349 1k8q_A Triacylglycerol lipase, 32.6 74 0.0025 29.5 6.5 43 398-440 25-67 (377)
350 4a9v_A PHOX; hydrolase, beta-p 30.3 1.8E+02 0.0062 30.1 9.1 73 97-184 480-553 (592)
351 3hx6_A Type 4 fimbrial biogene 29.7 1.8E+02 0.006 30.1 8.9 72 240-326 162-236 (570)
352 3hlk_A Acyl-coenzyme A thioest 28.4 74 0.0025 31.4 5.9 26 412-442 160-185 (446)
353 2bce_A Cholesterol esterase; h 27.5 37 0.0013 35.3 3.5 38 404-445 74-112 (579)
354 2jub_A IPI, internal protein I 26.6 9.3 0.00032 26.4 -0.8 32 407-441 22-53 (76)
355 4hvt_A Ritya.17583.B, post-pro 26.0 3.3E+02 0.011 28.8 10.7 63 73-145 370-438 (711)
356 1sfr_A Antigen 85-A; alpha/bet 23.5 90 0.0031 28.7 5.2 36 398-440 7-43 (304)
357 3k2i_A Acyl-coenzyme A thioest 22.2 99 0.0034 30.0 5.4 25 412-441 144-168 (422)
358 1ukc_A ESTA, esterase; fungi, 21.9 57 0.0019 33.2 3.6 35 407-445 82-116 (522)
359 3ft1_A PHL P 3 allergen; beta- 21.7 85 0.0029 24.3 3.7 28 400-427 64-91 (100)
360 1yiq_A Quinohemoprotein alcoho 21.5 1.7E+02 0.0059 30.7 7.4 75 75-173 455-531 (689)
361 2jnz_A PHL P 3 allergen; timot 20.7 86 0.0029 24.7 3.6 28 400-427 75-102 (108)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.91 E-value=2.2e-22 Score=220.36 Aligned_cols=329 Identities=12% Similarity=0.056 Sum_probs=208.6
Q ss_pred hhcceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 73 TTTQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
..+.+|++|+ +|+.++|+. ++....++|||||++|||++. .+|++++++++..++|+.....+.
T Consensus 90 ~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~--------------~~i~~~~~~~~~~~~lt~~g~~~~ 155 (740)
T 4a5s_A 90 YTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN--------------NDIYVKIEPNLPSYRITWTGKEDI 155 (740)
T ss_dssp EEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET--------------TEEEEESSTTSCCEECCSCCBTTT
T ss_pred cceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC--------------CeEEEEECCCCceEEEcCCCCccc
Confidence 4578999999 889888886 556689999999999999952 578999999888888876322111
Q ss_pred cccccccc---------ccceeeeEEecCCCceEEEEEeccCCcccccc------------------------CCCCeEE
Q 012630 151 IPIAYNSV---------REGMRLISWRADRPSTLYWVETQDGGAAKVEV------------------------SPRDIIY 197 (459)
Q Consensus 151 ~P~~~~~~---------~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~------------------------~~~~~l~ 197 (459)
. +.+. -...+.+.|||||+ .|+|....+..-..... .....|+
T Consensus 156 ~---~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~ 231 (740)
T 4a5s_A 156 I---YNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFF 231 (740)
T ss_dssp E---EESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEE
T ss_pred e---ecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEE
Confidence 0 0000 12235689999999 88887654332111000 0012688
Q ss_pred eccCCCCCC---C---CceEecc------ccceeccceeCCCCcEEEEEeecCCccEEEEEEcCCCCCC------CceEE
Q 012630 198 TQPAEPVEG---E---EPEILHK------LDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSKDT------APLIL 259 (459)
Q Consensus 198 ~~~~~pf~g---~---~~~~L~~------~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~~~------~~~~l 259 (459)
++++ ++ + +.+.|.. ....+..+.|||||..+++...+......|+++++++++. ..+++
T Consensus 232 v~d~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~ 308 (740)
T 4a5s_A 232 VVNT---DSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI 308 (740)
T ss_dssp EEET---TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE
T ss_pred EEEC---CCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee
Confidence 8888 65 5 4555543 2334567899999876665554445567899999876541 11222
Q ss_pred eecCCCCccCC---CCCCCeeeCCCCCEEE-EEeee-------------c----------------cCCCcEEEEEcCCC
Q 012630 260 FDRSSEDVYSD---PGLPMMRKSSTGTRVI-AKIKK-------------E----------------NDQGTYILLNGRGA 306 (459)
Q Consensus 260 ~d~~~~d~y~~---pg~~~~~~~~dg~~v~-~~~~~-------------~----------------~~~~~~ly~~~~g~ 306 (459)
.+.. +.+.+ +..+ .+++||+.++ +.... . .-+++.||+++.+.
T Consensus 309 ~~~~--~~~v~~~~~~~p--~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d~~~i~f~~~~~ 384 (740)
T 4a5s_A 309 EMST--TGWVGRFRPSEP--HFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEY 384 (740)
T ss_dssp EECS--SSCSSSSSCCCC--EECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEECSSEEEEEESCG
T ss_pred eccC--CceEccCcCCCc--eEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEeCCEEEEEEecC
Confidence 2211 12222 1122 4578888665 32211 0 02255677766430
Q ss_pred CCCCCcceEEEEECCCCceEEEeecC----cccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcce
Q 012630 307 TPEGDVPFLDLFNINTGSKERIWESD----KEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKC 382 (459)
Q Consensus 307 s~~gd~~~l~~~~l~tg~~~~l~~~~----~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~ 382 (459)
.......+|+++++++++.+....+. .. .+..+ .++.++..+++..+++. |+.+++++..+++.
T Consensus 385 ~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~-~~~~~----------~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~~ 452 (740)
T 4a5s_A 385 KGMPGGRNLYKIQLIDYTKVTCLSCELNPERC-QYYSV----------SFSKEAKYYQLRCSGPG-LPLYTLHSSVNDKG 452 (740)
T ss_dssp GGCTTCBEEEEEETTEEEEEEESSTTTSTTTB-CBEEE----------EECTTSSEEEEEECSBS-SCEEEEEETTTTEE
T ss_pred CCCCceeEEEEEECCCCCcceeeccccCCCCC-ceEEE----------EECCCCCEEEEEeCCCC-CCEEEEEECCCCcE
Confidence 01123457888888766554222211 01 12121 13556678888888887 99999999877777
Q ss_pred eecccccCC----CCCCcCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 383 RQITDFPHP----YPLLSTLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 383 ~~LT~~~~~----~~~~~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
.+++..|.. +....+.++|.+++ +.||.+|+++|++|++|++++ ++|+||++|..-
T Consensus 453 ~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~~~~--~~P~vv~~HGg~ 512 (740)
T 4a5s_A 453 LRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFDKSK--KYPLLLDVYAGP 512 (740)
T ss_dssp EEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCCTTS--CEEEEEECCCCT
T ss_pred EEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCCCCC--CccEEEEECCCC
Confidence 676655432 34455678899999 789999999999999998766 899999999864
No 2
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.88 E-value=1.8e-20 Score=201.64 Aligned_cols=307 Identities=12% Similarity=0.072 Sum_probs=204.1
Q ss_pred hcceEEEcCC----CceeecCC------CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC------c
Q 012630 74 TTQLVLATLD----GTVKEFGP------PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG------K 137 (459)
Q Consensus 74 ~sqL~~v~~~----G~~~~l~~------~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g------~ 137 (459)
..+||+++++ |+.++|+. ...+.+++|||||++|+|++....-. .+ .....++++||+++ +
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~--~~-~~~~~~i~~~~~~~~~~~~~~ 177 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGE--GP-SDVRRFLAAVPLDGSAAADRS 177 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSS--ST-TCEEEEEEEEETTSTTTTCGG
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCC--CC-CCceeEEEEEECCCCccccCC
Confidence 5789999987 78888887 23557999999999999997541100 00 01236899999998 7
Q ss_pred eeeeee-cccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCC-CC---CceEe
Q 012630 138 FVRQLC-ELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVE-GE---EPEIL 212 (459)
Q Consensus 138 ~~~~lt-~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~-g~---~~~~L 212 (459)
..+.|+ ... .....+.|||||+ +|+|+.....+.+ .....||++++ + .| +.+.|
T Consensus 178 ~~~~l~~~~~-------------~~~~~~~~SpDG~-~la~~~~~~~~~~----~~~~~i~~~d~---~~~g~~~~~~~l 236 (662)
T 3azo_A 178 AVRELSDDAH-------------RFVTGPRLSPDGR-QAVWLAWDHPRMP----WEGTELKTARV---TEDGRFADTRTL 236 (662)
T ss_dssp GSEESSCSCS-------------SEECCCEECTTSS-EEEEEEECTTCCT----TTCEEEEEEEE---CTTSCEEEEEEE
T ss_pred ceeEEEecCC-------------CcccCceECCCCC-EEEEEECCCCCCC----CCCcEEEEEEE---CCCCcccccEEe
Confidence 777776 321 1334679999999 8888764322110 11357999988 6 24 56666
Q ss_pred ccc-cceeccceeCCCCcEEEEEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeee
Q 012630 213 HKL-DLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKK 291 (459)
Q Consensus 213 ~~~-~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~ 291 (459)
+.. ......+.|++||. |++.... +...+||++++++++ .+.++...... +.+ .++++...+.+.
T Consensus 237 ~~~~~~~~~~~~~spdg~-l~~~~~~-~~~~~l~~~~~~~~~--~~~l~~~~~~~-----~~p--~w~~~~~~~~~~--- 302 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGS-LIVATDR-TGWWNLHRVDPATGA--ATQLCRREEEF-----AGP--LWTPGMRWFAPL--- 302 (662)
T ss_dssp EEETTBCEEEEEECTTSC-EEEEECT-TSSCEEEEECTTTCC--EEESSCCSSBS-----SCC--CCSTTCCSEEEC---
T ss_pred CCCCCceEcceEECCCCe-EEEEECC-CCCeEEEEEECCCCc--eeecccccccc-----cCc--cccccCceEeEe---
Confidence 654 45567789999987 4444332 345689999986543 34443321111 111 123332323222
Q ss_pred ccCCCcEEEEEcCCCCCCCCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcc
Q 012630 292 ENDQGTYILLNGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQ 371 (459)
Q Consensus 292 ~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~e 371 (459)
+++.+++.+. + ....|+.+|+.+++.+.|....+ .+..+. +.+++.+++...+...|++
T Consensus 303 ---~~~~~~~~~~----~-~~~~l~~~d~~~~~~~~l~~~~~--~~~~~~-----------s~~~~~~~~~~~~~~~~~~ 361 (662)
T 3azo_A 303 ---ANGLIAVVHG----K-GAAVLGILDPESGELVDAAGPWT--EWAATL-----------TVSGTRAVGVAASPRTAYE 361 (662)
T ss_dssp ---TTSCEEEEEB----S-SSCEEEEEETTTTEEEECCSSCC--EEEEEE-----------EEETTEEEEEEEETTEEEE
T ss_pred ---CCCEEEEEEE----c-CccEEEEEECCCCcEEEecCCCC--eEEEEE-----------ecCCCEEEEEEcCCCCCCE
Confidence 1224555442 2 34579999998888766643321 222221 2235789999999999999
Q ss_pred eEEEECCCcceeecccccCC-CCCCcCCceEEEEEECCCCcEEEEEEEccCCCC----CCCCCCceEEEEEcCCc
Q 012630 372 YWIQSWPHKKCRQITDFPHP-YPLLSTLQKELIKYQRKDGVQLTAKLYLPTGYD----PSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 372 ly~~~~~~g~~~~LT~~~~~-~~~~~~~~~E~i~yks~DG~~l~g~L~lP~~yd----~~k~~kyP~Il~~Yp~e 441 (459)
+|++++.+++.++||..+.. +....+..++.++|++.||.+|+++|++|++++ +++ ++|+||++|..-
T Consensus 362 i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~--~~p~vv~~HG~~ 434 (662)
T 3azo_A 362 VVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADE--LPPYVVMAHGGP 434 (662)
T ss_dssp EEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEEECCCCSSEECCTTC--CCCEEEEECSSS
T ss_pred EEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEEECCCCccccCCCCC--CccEEEEECCCC
Confidence 99999988899999876654 445566789999999999999999999999875 444 799999999863
No 3
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=8e-20 Score=199.02 Aligned_cols=336 Identities=13% Similarity=0.124 Sum_probs=199.0
Q ss_pred hhhHHHHHHHhhcceEEEcC-CC---ceeecCCC-ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc
Q 012630 63 EFDEYLFEHYTTTQLVLATL-DG---TVKEFGPP-AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK 137 (459)
Q Consensus 63 ~~D~~~f~~~~~sqL~~v~~-~G---~~~~l~~~-~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~ 137 (459)
..|+..+.+...++|+++++ +| +.++++.. .....++|||||++|+|++. .++++||++++
T Consensus 117 SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~--------------~~i~~~d~~~g 182 (741)
T 2ecf_A 117 SPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG--------------RNLWVIDLASG 182 (741)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--------------TEEEEEETTTT
T ss_pred CCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--------------CcEEEEecCCC
Confidence 34454444444589999999 77 78888764 55689999999999999962 36899999988
Q ss_pred eeeeeecccccccccccc-c----ccccceeeeEEecCCCceEEEEEeccCCcccc-------------cc--------C
Q 012630 138 FVRQLCELPLVENIPIAY-N----SVREGMRLISWRADRPSTLYWVETQDGGAAKV-------------EV--------S 191 (459)
Q Consensus 138 ~~~~lt~~p~~~~~P~~~-~----~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~-------------~~--------~ 191 (459)
..++++...... ..-+. + ......+.+.|||||+ .|++........... .. .
T Consensus 183 ~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 183 RQMQLTADGSTT-IGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp EEEECCCCCCSS-EEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CEEEeccCCccc-eeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 887776532110 00000 0 0001146789999999 787775432211000 00 0
Q ss_pred CCCeEEeccCCCCCC-CCceEeccc---cceeccceeCCCCcEEEEEe-ecCCccEEEEEEcCCCCCCCceEEeecCCCC
Q 012630 192 PRDIIYTQPAEPVEG-EEPEILHKL---DLRFRGVSWCDDSLALVQET-WFKTTQTRTWLISPGSKDTAPLILFDRSSED 266 (459)
Q Consensus 192 ~~~~l~~~~~~pf~g-~~~~~L~~~---~~~~~~~~Ws~D~~al~~~~-~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d 266 (459)
....|++++. .+ ++.+.+... ......+.| +||..|++.. .+......||++++.+++ .+.++.....
T Consensus 261 ~~~~l~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~~- 333 (741)
T 2ecf_A 261 VQVKLGVISP---AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ--QRVLAHETSP- 333 (741)
T ss_dssp CEEEEEEECS---STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC--EEEEEEEECS-
T ss_pred CeeEEEEEEC---CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc--eEEEEEcCCC-
Confidence 1227888888 66 677766532 334567899 9986665443 233456789999988653 3444322110
Q ss_pred ccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEc-CCC-----------------CCCCC------------cceEE
Q 012630 267 VYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNG-RGA-----------------TPEGD------------VPFLD 316 (459)
Q Consensus 267 ~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~-~g~-----------------s~~gd------------~~~l~ 316 (459)
.+.+... ...+++||+.++....+ ....||... .+. +++|. ...|+
T Consensus 334 ~~~~~~~-~~~~spdg~~~~~~~~~---g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 334 TWVPLHN-SLRFLDDGSILWSSERT---GFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp SCCCCCS-CCEECTTSCEEEEECTT---SSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEE
T ss_pred CcCCcCC-ceEECCCCeEEEEecCC---CccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEE
Confidence 0000000 12346666632222110 001233221 000 00110 12344
Q ss_pred EEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcceeecccccC-----C
Q 012630 317 LFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKCRQITDFPH-----P 391 (459)
Q Consensus 317 ~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~~~LT~~~~-----~ 391 (459)
.+++.++..+.|.... .+.. ..++.|+..+++..+++..|+++|+++..++..+.|+..+. .
T Consensus 410 ~~~~~g~~~~~l~~~~---~~~~----------~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l~~~~~~~~~~~ 476 (741)
T 2ecf_A 410 AVPLQGGQPQRLSKAP---GMHS----------ASFARNASVYVDSWSNNSTPPQIELFRANGEKIATLVENDLADPKHP 476 (741)
T ss_dssp EEETTCCCCEECCCSC---SEEE----------EEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECSSCCCSSSTTST
T ss_pred EEEcCCCCeeecccCC---CceE----------EEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEeccCcccccccc
Confidence 4443332233332211 1111 12466788999999999999999999986666677775443 2
Q ss_pred CCCC--cCCceEEEEEECCCC-cEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 392 YPLL--STLQKELIKYQRKDG-VQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 392 ~~~~--~~~~~E~i~yks~DG-~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
+... .+..+|.++|++.|| .+|++++++|+++++++ ++|+||+++..
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~--~~p~vv~~hG~ 526 (741)
T 2ecf_A 477 YARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPAK--RYPVAVYVYGG 526 (741)
T ss_dssp THHHHTTCCCEEEEEEECTTSSCEEEEEEECCSSCCTTS--CEEEEEECCCS
T ss_pred hhhhhccCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCC--CcCEEEEEcCC
Confidence 3334 567899999999999 99999999999987665 79999999874
No 4
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.85 E-value=1.4e-18 Score=189.22 Aligned_cols=319 Identities=12% Similarity=0.068 Sum_probs=183.8
Q ss_pred hcceEEEcC-CCceeecCC------Cc--eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeec
Q 012630 74 TTQLVLATL-DGTVKEFGP------PA--IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCE 144 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~------~~--~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~ 144 (459)
.++||+++. +|+.+.|.+ .+ .+.+++|||||++|||.+.+.- .-..+|+++|+++++...++.
T Consensus 97 ~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G--------~~~~~i~v~d~~tg~~~~~~~ 168 (710)
T 2xdw_A 97 QRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASG--------SDWVTIKFMKVDGAKELPDVL 168 (710)
T ss_dssp SCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETT--------CSCEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCC--------CceEEEEEEECCCCCCCcccc
Confidence 468999998 777665433 22 3578999999999999975421 012379999999887765433
Q ss_pred ccccccccccccccccceeeeEEecCCCceEEEEEeccCC----ccccccCCCCeEEeccCCCCCCCCc--eEeccc---
Q 012630 145 LPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGG----AAKVEVSPRDIIYTQPAEPVEGEEP--EILHKL--- 215 (459)
Q Consensus 145 ~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g----~~~~~~~~~~~l~~~~~~pf~g~~~--~~L~~~--- 215 (459)
.. .....+.|||||+ .|+|+...... +..........||.+++ .++.. +.+...
T Consensus 169 ~~-------------~~~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l---~t~~~~~~~v~~~~~~ 231 (710)
T 2xdw_A 169 ER-------------VKFSCMAWTHDGK-GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVL---GTDQSEDILCAEFPDE 231 (710)
T ss_dssp EE-------------ECSCCEEECTTSS-EEEEEECCCCSSCCSSSCCCCCCCCEEEEEET---TSCGGGCEEEECCTTC
T ss_pred cC-------------cccceEEEEeCCC-EEEEEEECCccccccccccccCCCCEEEEEEC---CCCcccceEEeccCCC
Confidence 11 0134689999999 88888643221 00011122357898887 43332 344332
Q ss_pred cceeccceeCCCCcEEEEEeecCC-ccEEEEEEcCCC------CCCCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEE
Q 012630 216 DLRFRGVSWCDDSLALVQETWFKT-TQTRTWLISPGS------KDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAK 288 (459)
Q Consensus 216 ~~~~~~~~Ws~D~~al~~~~~~~~-~~~~ly~v~~~~------~~~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~ 288 (459)
+....++.||+||..|++...... ...++|++++++ +....+.|....... ...++++|+.+++.
T Consensus 232 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~s~dg~~l~~~ 303 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE--------YDYVTNEGTVFTFK 303 (710)
T ss_dssp TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC--------EEEEEEETTEEEEE
T ss_pred CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE--------EEEEeccCCEEEEE
Confidence 222456899999866665443222 257899999865 332356665332111 01123344433332
Q ss_pred eeeccCCCcEEEEEcC--CC------------------------------CCCCCcceEEEEECCCCce-EEEeecCccc
Q 012630 289 IKKENDQGTYILLNGR--GA------------------------------TPEGDVPFLDLFNINTGSK-ERIWESDKEK 335 (459)
Q Consensus 289 ~~~~~~~~~~ly~~~~--g~------------------------------s~~gd~~~l~~~~l~tg~~-~~l~~~~~~~ 335 (459)
... +..+..|+.... +. ..+.....|+.+++.+|+. +.+-...+
T Consensus 304 s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~-- 380 (710)
T 2xdw_A 304 TNR-HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVG-- 380 (710)
T ss_dssp ECT-TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSS--
T ss_pred ECC-CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCc--
Confidence 210 000111222110 00 0011122344455433332 22211110
Q ss_pred ceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcc--eeecccccCCCCCCcCCceEEEEEECCCCcEE
Q 012630 336 YYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKK--CRQITDFPHPYPLLSTLQKELIKYQRKDGVQL 413 (459)
Q Consensus 336 ~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~--~~~LT~~~~~~~~~~~~~~E~i~yks~DG~~l 413 (459)
.+..+ .++.++..+++..+|.+.|+.+|++++.+++ .+.|...+-.-.+.....+|.|+|++.||.+|
T Consensus 381 ~v~~~----------~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dg~~i 450 (710)
T 2xdw_A 381 SVVGY----------SGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKI 450 (710)
T ss_dssp EEEEE----------ECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTCCGGGEEEEEEEEECTTSCEE
T ss_pred eEEEE----------ecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCcCccccEEEEEEEEcCCCCEE
Confidence 11111 1233567899999999999999999998777 55555432211122346889999999999999
Q ss_pred EEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 414 TAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 414 ~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
+++|++|+++++.+ ++|+||++|..
T Consensus 451 ~~~~~~p~~~~~~~--~~P~vl~~hGg 475 (710)
T 2xdw_A 451 PMFIVHKKGIKLDG--SHPAFLYGYGG 475 (710)
T ss_dssp EEEEEEETTCCCSS--CSCEEEECCCC
T ss_pred EEEEEecCCCCCCC--CccEEEEEcCC
Confidence 99999999987544 89999999984
No 5
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=5.6e-19 Score=191.42 Aligned_cols=305 Identities=13% Similarity=0.106 Sum_probs=191.9
Q ss_pred hhcceEEEcC-C-----CceeecCCCce----------------eeecccCCCCCeEEEEEeccC---------------
Q 012630 73 TTTQLVLATL-D-----GTVKEFGPPAI----------------YTAVEPSPDQKYILITSIDRP--------------- 115 (459)
Q Consensus 73 ~~sqL~~v~~-~-----G~~~~l~~~~~----------------~~~~~~SPDG~~l~~~~~~~p--------------- 115 (459)
...+|+++++ + |+.++++..+. ...+.|||||++|++.+....
T Consensus 139 ~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~ 218 (706)
T 2z3z_A 139 RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEA 218 (706)
T ss_dssp ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSC
T ss_pred ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 3478999999 7 88888776332 368999999999999973210
Q ss_pred ----ccccccc-CCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCcccccc
Q 012630 116 ----YSFTVSY-TKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEV 190 (459)
Q Consensus 116 ----~s~~v~~-~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~ 190 (459)
..|..+. ......+++||+++++.+.+..... -...++.+.|||||+ .|++... +.+.
T Consensus 219 ~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~spdg~-~l~~~~~-~~~~----- 281 (706)
T 2z3z_A 219 ESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP----------KEKFLTNLSWSPDEN-ILYVAEV-NRAQ----- 281 (706)
T ss_dssp EEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC----------TTCEEEEEEECTTSS-EEEEEEE-CTTS-----
T ss_pred ceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC----------CceeEeeEEEECCCC-EEEEEEe-CCCC-----
Confidence 0000000 0123679999999887766643211 123567899999999 7776643 2221
Q ss_pred CCCCeEEeccCCCCCCC-CceEeccc-cce----eccceeCC--CCcEEEEEeecCCccEEEEEEcCCCCCCCceEEeec
Q 012630 191 SPRDIIYTQPAEPVEGE-EPEILHKL-DLR----FRGVSWCD--DSLALVQETWFKTTQTRTWLISPGSKDTAPLILFDR 262 (459)
Q Consensus 191 ~~~~~l~~~~~~pf~g~-~~~~L~~~-~~~----~~~~~Ws~--D~~al~~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~ 262 (459)
....|+.+++ .++ +.+.+... ... ...+.|++ ||..++... .+...+||.++..++ ..+.|+..
T Consensus 282 -~~~~v~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~--~~g~~~l~~~~~~~~--~~~~l~~~ 353 (706)
T 2z3z_A 282 -NECKVNAYDA---ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR--RDGWNHLYLYDTTGR--LIRQVTKG 353 (706)
T ss_dssp -CEEEEEEEET---TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC--TTSSCEEEEEETTSC--EEEECCCS
T ss_pred -CeeEEEEEEC---CCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc--cCCccEEEEEECCCC--EEEecCCC
Confidence 1347888888 554 44555421 111 24579999 986444332 245688999986532 22333211
Q ss_pred CCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCCCceEEEeecCcccceEEEEE
Q 012630 263 SSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVA 342 (459)
Q Consensus 263 ~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~ 342 (459)
.... .....+++||+. ||+.+... ......|+++|+.+++.+.+.... .+..+ .
T Consensus 354 ~~~v------~~~~~~spdg~~--------------l~~~~~~~--~~~~~~l~~~d~~~~~~~~l~~~~---~~~~~-~ 407 (706)
T 2z3z_A 354 EWEV------TNFAGFDPKGTR--------------LYFESTEA--SPLERHFYCIDIKGGKTKDLTPES---GMHRT-Q 407 (706)
T ss_dssp SSCE------EEEEEECTTSSE--------------EEEEESSS--CTTCBEEEEEETTCCCCEESCCSS---SEEEE-E
T ss_pred CeEE------EeeeEEcCCCCE--------------EEEEecCC--CCceEEEEEEEcCCCCceeccCCC---ceEEE-E
Confidence 1000 000234666554 44444211 111346889999888776664322 22221 1
Q ss_pred eecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcceeecccccCCCCCCcCCceEEEEEECCCC-cEEEEEEEccC
Q 012630 343 LNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKCRQITDFPHPYPLLSTLQKELIKYQRKDG-VQLTAKLYLPT 421 (459)
Q Consensus 343 ~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~~~LT~~~~~~~~~~~~~~E~i~yks~DG-~~l~g~L~lP~ 421 (459)
++.|+..+++..++...|+++|++++.+++.+.++..+ ++....+..++.++++..|| .+|++++++|+
T Consensus 408 ---------~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~ 477 (706)
T 2z3z_A 408 ---------LSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKN-PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPL 477 (706)
T ss_dssp ---------ECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEECC-------CCCCEEEEEEECTTSSSEEEEEEECCT
T ss_pred ---------ECCCCCEEEEEecCCCCCcEEEEEECCCCeEeeccccc-hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCC
Confidence 34566789999999999999999998777745555543 45566778899999999999 99999999999
Q ss_pred CCCCCCCCCceEEEEEcCC
Q 012630 422 GYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 422 ~yd~~k~~kyP~Il~~Yp~ 440 (459)
++++++ ++|+||++|..
T Consensus 478 ~~~~~~--~~p~iv~~HGg 494 (706)
T 2z3z_A 478 HFDPAK--KYPVIVYVYGG 494 (706)
T ss_dssp TCCTTS--CEEEEEECCCC
T ss_pred CCCCCC--CccEEEEecCC
Confidence 998765 89999999984
No 6
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.84 E-value=3.4e-18 Score=185.87 Aligned_cols=325 Identities=14% Similarity=0.050 Sum_probs=183.3
Q ss_pred hcceEEEcC-CCceeecCCCc--------eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeec
Q 012630 74 TTQLVLATL-DGTVKEFGPPA--------IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCE 144 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~~~--------~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~ 144 (459)
.++||+++. +|+.+.|+++. .+.+++|||||++|||+..+.- .-..+|+++|+++++......
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G--------~~~~~i~v~dl~tg~~~~~~~ 164 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNA--------ADEAVLHVIDVDSGEWSKVDV 164 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETT--------CSCCEEEEEETTTCCBCSSCC
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCC--------CceEEEEEEECCCCCCcCCcc
Confidence 478999998 77888887632 3579999999999999975421 113679999998776531111
Q ss_pred ccccccccccccccccceeeeEEecCCCceEEEEEeccCC-ccccccCCCCeEEeccCCCCCCCC--ceEecccc---ce
Q 012630 145 LPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGG-AAKVEVSPRDIIYTQPAEPVEGEE--PEILHKLD---LR 218 (459)
Q Consensus 145 ~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g-~~~~~~~~~~~l~~~~~~pf~g~~--~~~L~~~~---~~ 218 (459)
.+ .+. ...+.|||||+ .|+|+.....+ +...+......||.++. .++. .+.+.... ..
T Consensus 165 ~~----------~~~--~~~~~wspDg~-~l~~~~~d~~~~~~~~~~~~~~~v~~~~l---~t~~~~~~lv~~~~~~~~~ 228 (695)
T 2bkl_A 165 IE----------GGK--YATPKWTPDSK-GFYYEWLPTDPSIKVDERPGYTTIRYHTL---GTEPSKDTVVHERTGDPTT 228 (695)
T ss_dssp BS----------CCT--TCCCEECTTSS-EEEEEECCCCTTSCGGGGGGGCEEEEEET---TSCGGGCEEEECCCCCTTC
T ss_pred cC----------ccc--ccceEEecCCC-EEEEEEecCCCCCccccCCCCCEEEEEEC---CCCchhceEEEecCCCCEE
Confidence 10 011 14679999999 88888654321 11111122357898887 4333 23444321 24
Q ss_pred eccceeCCCCcEEEEEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcE
Q 012630 219 FRGVSWCDDSLALVQETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTY 298 (459)
Q Consensus 219 ~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ 298 (459)
...+.||+||..|++..........+|+++..++ ..+.|........ ....++|+ +++... .+..+..
T Consensus 229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--~~~~l~~~~~~~~--------~~~~~~g~-l~~~s~-~~~~~~~ 296 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--DFRLLVKGVGAKY--------EVHAWKDR-FYVLTD-EGAPRQR 296 (695)
T ss_dssp EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--SCEEEEECSSCCE--------EEEEETTE-EEEEEC-TTCTTCE
T ss_pred EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--ceEEeecCCCceE--------EEEecCCc-EEEEEC-CCCCCCE
Confidence 5678999998655554432225678999976543 3566654321111 00113444 322211 0001122
Q ss_pred EEEEcC--CC-------CCCCCcceEEEEECCCCc---------eEEEeecC--cccceEEEEEeecCCC---ccccccC
Q 012630 299 ILLNGR--GA-------TPEGDVPFLDLFNINTGS---------KERIWESD--KEKYYETAVALNLDQS---VGDVNLN 355 (459)
Q Consensus 299 ly~~~~--g~-------s~~gd~~~l~~~~l~tg~---------~~~l~~~~--~~~~~e~~~~~~~~~~---~~~~~~d 355 (459)
|+.... +. .+......|..+.+..+. ..+||.-+ +. ....+ .+.... ...++.+
T Consensus 297 l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~-~~~~l--~~~~~~~v~~~~~s~d 373 (695)
T 2bkl_A 297 VFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGK-PVRTV--QLPGVGAASNLMGLED 373 (695)
T ss_dssp EEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCC-EEEEC--CCSSSSEECCCBSCTT
T ss_pred EEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCC-eeEEe--cCCCCeEEEEeecCCC
Confidence 332220 00 000000001001100000 00111100 00 00000 000000 0123446
Q ss_pred CCEEEEEeecCCCCcceEEEECCCcceeecccccCCCCCCcCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEE
Q 012630 356 QLKILTSKESKTEITQYWIQSWPHKKCRQITDFPHPYPLLSTLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLF 435 (459)
Q Consensus 356 ~~~i~~~~~s~~~P~ely~~~~~~g~~~~LT~~~~~~~~~~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il 435 (459)
+..+++..+|.+.|+.+|++++.+++.+.|+..+..+ ......+|.++|++.||.+|+++|++|+++++++ ++|+||
T Consensus 374 ~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~~~~~-~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~~~~~--~~p~vl 450 (695)
T 2bkl_A 374 LDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKVDVPM-NPEQYQVEQVFYASKDGTKVPMFVVHRKDLKRDG--NAPTLL 450 (695)
T ss_dssp CSEEEEEEEETTEEEEEEEEETTTCCEEEEEECCCSS-CGGGEEEEEEEEECTTSCEEEEEEEEETTCCCSS--CCCEEE
T ss_pred CCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCCC-CHHHCeEEEEEEECCCCCEEEEEEEECCCCCCCC--CccEEE
Confidence 7789999999999999999999888888787654332 2344689999999999999999999999987544 899999
Q ss_pred EEcCC
Q 012630 436 WAYPG 440 (459)
Q Consensus 436 ~~Yp~ 440 (459)
++|..
T Consensus 451 ~~hGg 455 (695)
T 2bkl_A 451 YGYGG 455 (695)
T ss_dssp ECCCC
T ss_pred EECCC
Confidence 99983
No 7
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=3.6e-18 Score=185.59 Aligned_cols=312 Identities=10% Similarity=0.011 Sum_probs=185.9
Q ss_pred hhcceEEEcC-CCceeecCCCce--------------------eeecccCCCCCeEEEEEeccC----c-----------
Q 012630 73 TTTQLVLATL-DGTVKEFGPPAI--------------------YTAVEPSPDQKYILITSIDRP----Y----------- 116 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~~~~--------------------~~~~~~SPDG~~l~~~~~~~p----~----------- 116 (459)
...+|+++++ +|+.++++..+. ...++|||||++|+|.+.+.. +
T Consensus 128 ~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~ 207 (719)
T 1z68_A 128 YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYP 207 (719)
T ss_dssp ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSC
T ss_pred ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCc
Confidence 4468999999 888888875331 147999999999999975421 0
Q ss_pred -----ccccccC-CCCcceEEEecCCceee---eeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccc
Q 012630 117 -----SFTVSYT-KFPQKVQVWTADGKFVR---QLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAK 187 (459)
Q Consensus 117 -----s~~v~~~-~~~~~~~v~d~~g~~~~---~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~ 187 (459)
.|-.+.. ....++++||++++... ++.. |..+.........+.||||++ ++++... .++
T Consensus 208 ~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~SpD~~--~~~~~~~-~~~-- 275 (719)
T 1z68_A 208 RTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPV-------PAMIASSDYYFSWLTWVTDER--VCLQWLK-RVQ-- 275 (719)
T ss_dssp EEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCC-------CHHHHTSCEEEEEEEESSSSE--EEEEEEE-SST--
T ss_pred cceeecCCCCCCCCCeeEEEEEECCCCCccceeEccC-------CccCCCCcceEEEeEEeCCCe--EEEEEec-ccc--
Confidence 0000000 01237899999877642 3321 111111123456889999954 4444221 211
Q ss_pred cccCCCCeEEecc----CCCCCCCCceEecc----c-cceec-----cceeCCCCcEEEEEeecCCccEEEEEEcCCCCC
Q 012630 188 VEVSPRDIIYTQP----AEPVEGEEPEILHK----L-DLRFR-----GVSWCDDSLALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 188 ~~~~~~~~l~~~~----~~pf~g~~~~~L~~----~-~~~~~-----~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
....|++++ + .+++.+.++. . ..... .+.|++||..|++.........+||++++.+++
T Consensus 276 ----~~~~l~~~d~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 276 ----NVSVLSICDFREDW---QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp ----TEEEEEEEEECSSS---SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred ----CeEEEEEEcccCCC---CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 124688888 6 5446666652 2 22233 689999985444322113567889999987543
Q ss_pred CCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCCCc--eEEEeec
Q 012630 254 TAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINTGS--KERIWES 331 (459)
Q Consensus 254 ~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg~--~~~l~~~ 331 (459)
.+.|+..... +. .++.. +++.||+.+...........|+++++.+|. .+.+...
T Consensus 349 --~~~lt~~~~~---------v~-------~~~~~------d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~ 404 (719)
T 1z68_A 349 --AIQITSGKWE---------AI-------NIFRV------TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCH 404 (719)
T ss_dssp --CEECSCSSSC---------EE-------EEEEE------CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTT
T ss_pred --eEecccCceE---------EE-------EEEEE------eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCc
Confidence 3544321100 00 01111 133566665210001233568899886663 3444211
Q ss_pred ---CcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcceeecccccCC----CCCCcCCceEEEE
Q 012630 332 ---DKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKCRQITDFPHP----YPLLSTLQKELIK 404 (459)
Q Consensus 332 ---~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~~~LT~~~~~----~~~~~~~~~E~i~ 404 (459)
... .+..+ . ++.++..+++..++++.| .++++++.+|+..+++..|.. +....+..+|.++
T Consensus 405 ~~~~~~-~~~~~-~---------~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (719)
T 1z68_A 405 LRKERC-QYYTA-S---------FSDYAKYYALVCYGPGIP-ISTLHDGRTDQEIKILEENKELENALKNIQLPKEEIKK 472 (719)
T ss_dssp TTTTTB-CBEEE-E---------ECGGGSSEEEEECCBSSC-EEEEECSSSCCEEEEEECCHHHHHHTTSBCCCEEEEEE
T ss_pred cCCCCC-ceEEE-E---------ECCCCCEEEEEcCCCCCC-eEEEEECCCCCEEEEeecchhhhhhhccccCCceEEEE
Confidence 101 11111 1 344567788888888877 588899877887777776553 4455677899999
Q ss_pred EECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 405 YQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 405 yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
+++.| .+|+++|++|+++++++ ++|+||++|..-.
T Consensus 473 ~~~~~-~~l~~~~~~P~~~~~~~--~~p~vl~~hG~~~ 507 (719)
T 1z68_A 473 LEVDE-ITLWYKMILPPQFDRSK--KYPLLIQVYGGPC 507 (719)
T ss_dssp EEETT-EEEEEEEEECTTCCSSS--CEEEEEEECCCTT
T ss_pred EecCC-eEEEEEEEeCCCCCCCC--CccEEEEECCCCC
Confidence 99998 99999999999998665 8999999998654
No 8
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=1e-18 Score=189.63 Aligned_cols=322 Identities=10% Similarity=-0.017 Sum_probs=185.8
Q ss_pred hhhHHHHHHHhhcceEEEcC-CCceeecCCCce--------------------eeecccCCCCCeEEEEEeccCc--ccc
Q 012630 63 EFDEYLFEHYTTTQLVLATL-DGTVKEFGPPAI--------------------YTAVEPSPDQKYILITSIDRPY--SFT 119 (459)
Q Consensus 63 ~~D~~~f~~~~~sqL~~v~~-~G~~~~l~~~~~--------------------~~~~~~SPDG~~l~~~~~~~p~--s~~ 119 (459)
..|+..+.|....+|+++++ +|+.++++..+. +..++|||||++|+|.+....- .+.
T Consensus 122 SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~ 201 (723)
T 1xfd_A 122 GPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIME 201 (723)
T ss_dssp CSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEE
T ss_pred CCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEE
Confidence 33455455555578999999 888888775321 1579999999999999754210 000
Q ss_pred cc--------------c--C---CCCcceEEEecCCcee-eeeecccccccccccccccccceeeeEEecCCCceEEEEE
Q 012630 120 VS--------------Y--T---KFPQKVQVWTADGKFV-RQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVE 179 (459)
Q Consensus 120 v~--------------~--~---~~~~~~~v~d~~g~~~-~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~ 179 (459)
++ + . .....+++||++++.. ++++.... + ..-......+.|||||+ .|+...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~----~---~~~~~~~~~~~~SpDg~-~l~~~~ 273 (723)
T 1xfd_A 202 LPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD----P---RMREYYITMVKWATSTK-VAVTWL 273 (723)
T ss_dssp ECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC----G---GGSSEEEEEEEESSSSE-EEEEEE
T ss_pred eeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc----C---CCccceeEEEEEeCCCe-EEEEEE
Confidence 00 0 0 0123799999887663 55543110 0 01123456789999998 665443
Q ss_pred eccCCccccccCCCCeEEeccCCCCCCCCceEeccc--ccee----ccceeCCCCcEEEEE-eecCCc----cEEEEEEc
Q 012630 180 TQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL--DLRF----RGVSWCDDSLALVQE-TWFKTT----QTRTWLIS 248 (459)
Q Consensus 180 ~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~--~~~~----~~~~Ws~D~~al~~~-~~~~~~----~~~ly~v~ 248 (459)
.... ....|+++++ .+++.+.+... .... ..+.|+|||..|++. .. .+. ..+||.++
T Consensus 274 ~~~~--------~~~~i~~~d~---~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 274 NRAQ--------NVSILTLCDA---TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAI-PQGGRGKFYHITVSS 341 (723)
T ss_dssp ETTS--------CEEEEEEEET---TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEE-CCSSSSCEEEEEEEC
T ss_pred cCCC--------CeEEEEEEeC---CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEec-ccCCCcceeEEEEEe
Confidence 2211 1346888887 55576666432 1111 378999998544432 22 123 67899999
Q ss_pred -CCCCCC-CceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCCC-ce
Q 012630 249 -PGSKDT-APLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINTG-SK 325 (459)
Q Consensus 249 -~~~~~~-~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg-~~ 325 (459)
..++.. ..+.|+...... .....+++||+. ||+.+... ......|+++++.++ +.
T Consensus 342 ~~~~~~~~~~~~l~~~~~~~------~~~~~~spdg~~--------------l~~~~~~~--~~~~~~l~~~~~~~~~~~ 399 (723)
T 1xfd_A 342 SQPNSSNDNIQSITSGDWDV------TKILAYDEKGNK--------------IYFLSTED--LPRRRQLYSANTVGNFNR 399 (723)
T ss_dssp SSCCSSSCCCCBSCCSSSCE------EEEEEEETTTTE--------------EEEEESSS--CTTCCEEEEECSSTTCCC
T ss_pred ccCCCCccceeEeecCCeEE------EeeeEEcCCCCE--------------EEEEEcCC--CCcceEEEEEeCCCCCCc
Confidence 443320 023332111000 001235666664 44443211 012356888887654 33
Q ss_pred EEEeec--CcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcce-eeccccc---CCCCCCcCCc
Q 012630 326 ERIWES--DKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKC-RQITDFP---HPYPLLSTLQ 399 (459)
Q Consensus 326 ~~l~~~--~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~-~~LT~~~---~~~~~~~~~~ 399 (459)
+.+... ... .+..+ .++.|+..+++..+++..|+.+++ +..+++. ..+.... ..+.+..+..
T Consensus 400 ~~l~~~~~~~~-~~~~~----------~~spdg~~l~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (723)
T 1xfd_A 400 QCLSCDLVENC-TYFSA----------SFSHSMDFFLLKCEGPGVPMVTVH-NTTDKKKMFDLETNEHVKKAINDRQMPK 467 (723)
T ss_dssp BCSSTTSSSSC-CCCEE----------EECTTSSEEEEECCSSSSCCEEEE-ETTTCCEEEEEECCHHHHHHHHTSCCCB
T ss_pred ceecccccCCC-CeEEE----------EECCCCCEEEEEccCCCCCeEEEE-ECCCCCEEEEeccChhhhhhhhhccCCC
Confidence 333221 111 11111 135567889999999999987654 6544443 2232211 1234556678
Q ss_pred eEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 400 KELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 400 ~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
+|.++|++.|| +|+++|++|++|++++ ++|+||+++..-
T Consensus 468 ~~~~~~~~~~g-~l~~~~~~P~~~~~~~--~~p~vv~~HG~~ 506 (723)
T 1xfd_A 468 VEYRDIEIDDY-NLPMQILKPATFTDTT--HYPLLLVVDGTP 506 (723)
T ss_dssp CCBCCEEETTE-EECCBEEBCSSCCSSS--CEEEEEECCCCT
T ss_pred ceEEEEEcCCc-eEEEEEEeCCCCCCCC--ccCEEEEEcCCC
Confidence 99999999999 9999999999998665 899999998753
No 9
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.80 E-value=6.1e-17 Score=176.07 Aligned_cols=293 Identities=11% Similarity=0.076 Sum_probs=169.6
Q ss_pred eeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCce
Q 012630 95 YTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPST 174 (459)
Q Consensus 95 ~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~ 174 (459)
+.+++|||||++|||+..+.- .-..+|+|+|+++++....+-. .+ ....+.|+ ||+ .
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G--------~~~~~i~v~dl~tg~~~~~~~~-----------~~--k~~~~~Ws-Dg~-~ 187 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAG--------SDWREIHLMDVESKQPLETPLK-----------DV--KFSGISWL-GNE-G 187 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSS--------CCEEEEEEEETTTCSEEEEEEE-----------EE--ESCCCEEE-TTT-E
T ss_pred EEEEEECCCCCEEEEEEecCC--------CceEEEEEEECCCCCCCccccC-----------Cc--eeccEEEe-CCC-E
Confidence 468899999999999975421 1125789999987765443211 00 01367999 999 8
Q ss_pred EEEEEeccCCc-cccccCCCCeEEeccCCCCCCCCceEeccccc----eeccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 175 LYWVETQDGGA-AKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL----RFRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 175 l~~~~~~d~g~-~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~----~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
|+|+...+.++ ..........||.++. --..++.+.+..... .+.++.||+||..|++.........++|++++
T Consensus 188 l~y~~~~~~~~~~~~~~~~~~~v~~~~l-gt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 266 (693)
T 3iuj_A 188 FFYSSYDKPDGSELSARTDQHKVYFHRL-GTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDL 266 (693)
T ss_dssp EEEEESSCCC-------CCCCEEEEEET-TSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEET
T ss_pred EEEEEecCcccccccccCCCcEEEEEEC-CCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEEC
Confidence 88887543211 1111112356888766 001123455655432 34568899998666554433333468999998
Q ss_pred CCCCCCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCCCce---E
Q 012630 250 GSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINTGSK---E 326 (459)
Q Consensus 250 ~~~~~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg~~---~ 326 (459)
++++...+.|..+...+. ..++++|+.++ +.++ .++....|+++++++++. +
T Consensus 267 ~~~~~~~~~l~~~~~~~~--------~~~~~~g~~l~--------------~~t~---~~~~~~~l~~~d~~~~~~~~~~ 321 (693)
T 3iuj_A 267 SQENAPLLTVQGDLDADV--------SLVDNKGSTLY--------------LLTN---RDAPNRRLVTVDAANPGPAHWR 321 (693)
T ss_dssp TSTTCCCEEEECSSSSCE--------EEEEEETTEEE--------------EEEC---TTCTTCEEEEEETTSCCGGGCE
T ss_pred CCCCCceEEEeCCCCceE--------EEEeccCCEEE--------------EEEC---CCCCCCEEEEEeCCCCCccccE
Confidence 766545666654321111 01223333332 2221 011112233333333221 1
Q ss_pred EEeecCccc-----------------ceEEEEEeecCCC---------------ccccccCCCEEEEEeecCCCCcceEE
Q 012630 327 RIWESDKEK-----------------YYETAVALNLDQS---------------VGDVNLNQLKILTSKESKTEITQYWI 374 (459)
Q Consensus 327 ~l~~~~~~~-----------------~~e~~~~~~~~~~---------------~~~~~~d~~~i~~~~~s~~~P~ely~ 374 (459)
.+....... ....+ .+.+..+ ....+.++..+++..++.+.|+.+|.
T Consensus 322 ~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l-~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~ 400 (693)
T 3iuj_A 322 DLIPERQQVLTVHSGSGYLFAEYMVDATARV-EQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYR 400 (693)
T ss_dssp EEECCCSSCEEEEEETTEEEEEEEETTEEEE-EEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEE
T ss_pred EEecCCCCEEEEEEECCEEEEEEEECCeeEE-EEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEE
Confidence 111100000 00000 0111100 01123367789999999999999999
Q ss_pred EECCCcceeecccccCCCCCCcCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 375 QSWPHKKCRQITDFPHPYPLLSTLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 375 ~~~~~g~~~~LT~~~~~~~~~~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
+++.+++.+.|+..+..+. .....+|.|+|++.||.+|+++|++|+++++++ ++|+||++|..
T Consensus 401 ~d~~~g~~~~l~~~~~~~~-~~~~~~~~~~~~~~dg~~i~~~l~~p~~~~~~~--~~P~ll~~hGg 463 (693)
T 3iuj_A 401 FEPKSGAISLYRASAAPFK-PEDYVSEQRFYQSKDGTRVPLIISYRKGLKLDG--SNPTILYGYGG 463 (693)
T ss_dssp ECTTTCCEEEEECCCSSCC-GGGEEEEEEEEECTTSCEEEEEEEEESSCCCSS--CCCEEEECCCC
T ss_pred EECCCCeEEEEEeCCCCcC-hhhCeeEEEEEecCCCcEEEEEEEecCCCCCCC--CccEEEEECCC
Confidence 9998888888887655433 334689999999999999999999999987544 89999999985
No 10
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.78 E-value=1e-16 Score=175.56 Aligned_cols=316 Identities=11% Similarity=0.009 Sum_probs=175.2
Q ss_pred hcceEEEcC----CCceeecCC------Cc--eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeee
Q 012630 74 TTQLVLATL----DGTVKEFGP------PA--IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQ 141 (459)
Q Consensus 74 ~sqL~~v~~----~G~~~~l~~------~~--~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~ 141 (459)
.++||+++. +|+.+.|.+ .+ ...+++|||||++|||.+.+.-. -..+|+++|+++++...
T Consensus 132 ~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~--------e~~~i~v~dl~tg~~~~ 203 (741)
T 1yr2_A 132 QSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS--------DWRTVKFVGVADGKPLA 203 (741)
T ss_dssp SCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC--------SEEEEEEEETTTCCEEE
T ss_pred EEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC--------ceEEEEEEECCCCCCCC
Confidence 378899986 356666533 22 45789999999999999754210 12468999999877654
Q ss_pred eecccccccccccccccccceeeeEEecCCCceEEEEEeccCC--ccccccCCCCeEEeccCCCCCCCC--ceEeccccc
Q 012630 142 LCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGG--AAKVEVSPRDIIYTQPAEPVEGEE--PEILHKLDL 217 (459)
Q Consensus 142 lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g--~~~~~~~~~~~l~~~~~~pf~g~~--~~~L~~~~~ 217 (459)
.... + + ....+.|||| + .|+|+...... +..........||.++. .++. .+.+.....
T Consensus 204 ~~~~---~--------~--~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~l---gt~~~~~~lv~~~~~ 265 (741)
T 1yr2_A 204 DELK---W--------V--KFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRL---GTPQSADQPVFATPE 265 (741)
T ss_dssp EEEE---E--------E--ESCCCEESTT-S-EEEEEECCCC--------CCCCCEEEEEET---TSCGGGCEEEECCTT
T ss_pred ccCC---C--------c--eeccEEEECC-C-EEEEEEecCcccccccccCCCCCEEEEEEC---CCCchhCEEEeccCC
Confidence 3210 0 0 1136799999 7 88888643221 11011112347888877 3323 234443321
Q ss_pred ---eeccceeCCCCcEEEEEeecC-CccEEEEEEcCCCCCCC-ceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeec
Q 012630 218 ---RFRGVSWCDDSLALVQETWFK-TTQTRTWLISPGSKDTA-PLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKE 292 (459)
Q Consensus 218 ---~~~~~~Ws~D~~al~~~~~~~-~~~~~ly~v~~~~~~~~-~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~ 292 (459)
...++.||+||..|++..... +....+|+++++++... .+.|....... .....++|+.+++....
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--------~~~~~~dg~~l~~~s~~- 336 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ--------WDFVDGVGDQLWFVSGD- 336 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC--------EEEEEEETTEEEEEECT-
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce--------EEEEeccCCEEEEEECC-
Confidence 356789999986555544322 24568999998765223 46665332111 11112455544333210
Q ss_pred cCCCcEEEEEcC-C--C-----CC---------------------CCCcceEEEEECCCCceEEEeecCcccceEEEEEe
Q 012630 293 NDQGTYILLNGR-G--A-----TP---------------------EGDVPFLDLFNINTGSKERIWESDKEKYYETAVAL 343 (459)
Q Consensus 293 ~~~~~~ly~~~~-g--~-----s~---------------------~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~ 343 (459)
+..+..|+.... + . .+ +.....|+.+++.++..+.+- .+....+.
T Consensus 337 ~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~-~~~~~~v~----- 410 (741)
T 1yr2_A 337 GAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVS-LPGIGSAS----- 410 (741)
T ss_dssp TCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECB-CSSSCEEE-----
T ss_pred CCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeecc-CCCCeEEE-----
Confidence 000112222210 0 0 00 000111122222111111110 00000000
Q ss_pred ecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcceeecccccCCCCCCcCCceEEEEEECCCCcEEEEEEEccCCC
Q 012630 344 NLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKCRQITDFPHPYPLLSTLQKELIKYQRKDGVQLTAKLYLPTGY 423 (459)
Q Consensus 344 ~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~~~LT~~~~~~~~~~~~~~E~i~yks~DG~~l~g~L~lP~~y 423 (459)
...++.++..+++..+|.+.|+.+|++++.+++.+.|+..+..+ ......+|.++|++.||.+|+++|++|+++
T Consensus 411 -----~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~~~~~~-~~~~~~~~~~~~~~~dg~~i~~~~~~p~~~ 484 (741)
T 1yr2_A 411 -----GLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWEPVHLTF-DPADFRVEQVFYPSKDGTKVPMFIVRRKDA 484 (741)
T ss_dssp -----EEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECSCCCCSS-CGGGEEEEEEEEECTTSCEEEEEEEEETTC
T ss_pred -----EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecCCCCC-ChhHCEEEEEEEEcCCCCEEEEEEEecCCC
Confidence 01123466789999999999999999999888877776622112 334568999999999999999999999987
Q ss_pred CCCCCCCceEEEEEcCC
Q 012630 424 DPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 424 d~~k~~kyP~Il~~Yp~ 440 (459)
++ ++|+||++|..
T Consensus 485 --~~--~~p~vl~~hGg 497 (741)
T 1yr2_A 485 --KG--PLPTLLYGYGG 497 (741)
T ss_dssp --CS--CCCEEEECCCC
T ss_pred --CC--CCcEEEEECCC
Confidence 23 79999999984
No 11
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=4.2e-17 Score=172.99 Aligned_cols=274 Identities=14% Similarity=0.067 Sum_probs=178.9
Q ss_pred cceEEEcC--CCceeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccccc
Q 012630 75 TQLVLATL--DGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 75 sqL~~v~~--~G~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P 152 (459)
.+||.+++ +|...+++........+|||||+.++|++... ..+.+||+++++.++++..+.
T Consensus 90 ~~l~~~~~~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~------------~~~~l~d~~~g~~~~l~~~~~----- 152 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATE------------DRVALYALDGGGLRELARLPG----- 152 (582)
T ss_dssp EEEEEEETTSTTCCEECTTSCSBEEEEEEECSSCEEEEEECS------------SCEEEEEEETTEEEEEEEESS-----
T ss_pred eEEEEEeccCCCccccccCCCCceeeeeCCCCCeEEEEecCC------------CCceEEEccCCcEEEeecCCC-----
Confidence 47999998 77777887755455779999999999887431 334588998888888876421
Q ss_pred ccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEE
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALV 232 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~ 232 (459)
..+.|||||+ .|++.....++ ...||++++ ++++.+.|+........+.|||||..|+
T Consensus 153 ----------~~~~~spDG~-~la~~~~~~~~--------~~~i~~~d~---~~g~~~~l~~~~~~~~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 153 ----------FGFVSDIRGD-LIAGLGFFGGG--------RVSLFTSNL---SSGGLRVFDSGEGSFSSASISPGMKVTA 210 (582)
T ss_dssp ----------CEEEEEEETT-EEEEEEEEETT--------EEEEEEEET---TTCCCEEECCSSCEEEEEEECTTSCEEE
T ss_pred ----------ceEEECCCCC-EEEEEEEcCCC--------CeEEEEEcC---CCCCceEeecCCCccccceECCCCCEEE
Confidence 4789999999 78876543221 235999997 6668888887666678899999997666
Q ss_pred EEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCC-C--CCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCC
Q 012630 233 QETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPG-L--PMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPE 309 (459)
Q Consensus 233 ~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg-~--~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~ 309 (459)
... ..+...||++++++++ .+++.+... .. ..+. . ....+++||+ +++.... ++ .
T Consensus 211 ~~~--~~~~~~i~~~d~~~~~--~~~~~~~~~-~~-~~~~~~~~~~~~~spdg~-~~~~~~~---~g-~----------- 268 (582)
T 3o4h_A 211 GLE--TAREARLVTVDPRDGS--VEDLELPSK-DF-SSYRPTAITWLGYLPDGR-LAVVARR---EG-R----------- 268 (582)
T ss_dssp EEE--CSSCEEEEEECTTTCC--EEECCCSCS-HH-HHHCCSEEEEEEECTTSC-EEEEEEE---TT-E-----------
T ss_pred Ecc--CCCeeEEEEEcCCCCc--EEEccCCCc-Ch-hhhhhccccceeEcCCCc-EEEEEEc---CC-c-----------
Confidence 332 2455789999998654 343221111 00 0000 0 0011678883 4333211 11 1
Q ss_pred CCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcceeeccccc
Q 012630 310 GDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKCRQITDFP 389 (459)
Q Consensus 310 gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~~~LT~~~ 389 (459)
..|+ ++ |+.... ..+ .+..+. ++ ++++++..++...|+++|+++..+ +.++|
T Consensus 269 ---~~l~--~~--g~~~~~--~~~--~v~~~~----------~s--dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l---- 320 (582)
T 3o4h_A 269 ---SAVF--ID--GERVEA--PQG--NHGRVV----------LW--RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG---- 320 (582)
T ss_dssp ---EEEE--ET--TEEECC--CSS--EEEEEE----------EE--TTEEEEEEEETTEEEEEEEETTCC-EEECC----
T ss_pred ---EEEE--EE--CCeecc--CCC--ceEEEE----------ec--CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE----
Confidence 1122 22 322211 111 122221 12 267889999999999999999754 66666
Q ss_pred CCCCC---CcCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 390 HPYPL---LSTLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 390 ~~~~~---~~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
.+.. ..+..+|.++|++.||.+|++++++|+++++ ++|+||+++..-+
T Consensus 321 -~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~p~~~~~----~~p~vv~~HG~~~ 371 (582)
T 3o4h_A 321 -GLPEDLRRSIAGSRLVWVESFDGSRVPTYVLESGRAPT----PGPTVVLVHGGPF 371 (582)
T ss_dssp -CCCHHHHHTEEEEEEEEEECTTSCEEEEEEEEETTSCS----SEEEEEEECSSSS
T ss_pred -ecCCccccccCcceEEEEECCCCCEEEEEEEcCCCCCC----CCcEEEEECCCcc
Confidence 2222 5567899999999999999999999998763 6999999998543
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.74 E-value=2.8e-16 Score=172.47 Aligned_cols=293 Identities=12% Similarity=0.051 Sum_probs=173.3
Q ss_pred cceEEEcC-CC-ceeecCC--CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee--eeeeccccc
Q 012630 75 TQLVLATL-DG-TVKEFGP--PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV--RQLCELPLV 148 (459)
Q Consensus 75 sqL~~v~~-~G-~~~~l~~--~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~--~~lt~~p~~ 148 (459)
.+||++++ +| +. +.. +....++.|||||+.|+|++..+. ..+.+|+++++.++.. ..+...+..
T Consensus 201 ~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~d~~--------~~~~~v~~~~lgt~~~~~~lv~~~~~~ 270 (751)
T 2xe4_A 201 YTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTKDET--------LRENKVWRHVMGKLQSEDVCLYEEHNP 270 (751)
T ss_dssp EEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEECTT--------CCEEEEEEEETTSCGGGCEEEEECCCT
T ss_pred EEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEECCC--------CCCCEEEEEECCCCchhcEEEEecCCC
Confidence 46999999 77 52 222 233468999999999999975321 1235789999876532 233221110
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCC--Cc--eEeccccceecccee
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE--EP--EILHKLDLRFRGVSW 224 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~--~~--~~L~~~~~~~~~~~W 224 (459)
.-...+.|||||+ .|++.... . ...+||++++ +++ +. +.|+... .+..|
T Consensus 271 -----------~~~~~~~~SpDg~-~l~~~~~~-~--------~~~~l~~~d~---~~~~~~~~~~~l~~~~---~~~~~ 323 (751)
T 2xe4_A 271 -----------LFSAFMYKAADTN-TLCIGSQS-P--------ETAEVHLLDL---RKGNAHNTLEIVRPRE---KGVRY 323 (751)
T ss_dssp -----------TCEEEEEECTTSS-EEEEEEEC-S--------SCEEEEEEES---SSCTTCCCEEESSCCC---TTCCE
T ss_pred -----------ceEEEEEECCCCC-EEEEEecC-C--------CCceEEEEEC---CCCCCCceeEEeecCC---CCceE
Confidence 0123578999999 77776532 1 1457999988 543 45 6665422 23445
Q ss_pred CCC---CcEEEEEeecC-CccEEEEEEcCCCCCCCce-EEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEE
Q 012630 225 CDD---SLALVQETWFK-TTQTRTWLISPGSKDTAPL-ILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYI 299 (459)
Q Consensus 225 s~D---~~al~~~~~~~-~~~~~ly~v~~~~~~~~~~-~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~l 299 (459)
+++ |..|++....+ ..+.+||.+++++++...+ ++.... +..+.....+ ++.|
T Consensus 324 s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~--------~~~l~~~~~~--------------~~~l 381 (751)
T 2xe4_A 324 DVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSE--------DVFMESIAVR--------------SNYL 381 (751)
T ss_dssp EEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCS--------SEEEEEEEEC--------------SSEE
T ss_pred EEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCC--------CcEEEEEEEE--------------CCEE
Confidence 443 43444333333 4678999999864311123 332110 0000011111 2244
Q ss_pred EEEcCCCCCCCCcceEEEEEC-------CCCc-eEEEeecCcccceEEEEEee-cCCCccccccCCCEEEEEeecCCCCc
Q 012630 300 LLNGRGATPEGDVPFLDLFNI-------NTGS-KERIWESDKEKYYETAVALN-LDQSVGDVNLNQLKILTSKESKTEIT 370 (459)
Q Consensus 300 y~~~~g~s~~gd~~~l~~~~l-------~tg~-~~~l~~~~~~~~~e~~~~~~-~~~~~~~~~~d~~~i~~~~~s~~~P~ 370 (459)
++.. .......|+.+++ ++++ .+.|--.. . .+. ..+. +. ..+.++..++++.++.+.|+
T Consensus 382 v~~~----~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~-~-~~~--~~~~~~~----~~~~~~~~l~~~~ss~~~P~ 449 (751)
T 2xe4_A 382 VVAG----RRAGLTRIWTMMADSQDGVFKAGTGLREVVMEE-P-IFT--VHLVESQ----MLEYEEPTFRMEYSSLATPN 449 (751)
T ss_dssp EEEE----EETTEEEEEEEECCTTTSCCCTTTCCEECCCCC-S-SCE--EEECGGG----CCCTTCSCEEEEEEETTEEE
T ss_pred EEEE----EeCCEEEEEEEecccccccccCCccceEECCCC-c-eeE--EEeccCc----ccCCCCCEEEEEEeCCCCCC
Confidence 4443 1222356777775 5555 45442111 1 110 1110 00 00224568999999999999
Q ss_pred ceEEEECCCcceeecccccCC-CCCCcCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 371 QYWIQSWPHKKCRQITDFPHP-YPLLSTLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 371 ely~~~~~~g~~~~LT~~~~~-~~~~~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
++|.+++.+++.+.|+..+.+ ........+|.|+|++.||.+|+++|++|+++++++ ++|+||++|..
T Consensus 450 ~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~--~~P~vl~~HGg 518 (751)
T 2xe4_A 450 TWFDVSPQDHSRTAVKVREVGGGFDAANYKVERRFATAPDQTKIPLSVVYHKDLDMSQ--PQPCMLYGYGS 518 (751)
T ss_dssp EEEEECTTTCCEEEEEECCCCTTCCGGGEEEEEEEEECTTCCEEEEEEEEETTSCTTS--CCCEEEECCCC
T ss_pred EEEEEECCCCcEEEEeccccccCCCccceEEEEEEEECCCCcEEEEEEEcCCCCCCCC--CccEEEEECCC
Confidence 999999988888888865432 111223468999999999999999999999986544 89999999984
No 13
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.57 E-value=5.1e-13 Score=136.10 Aligned_cols=235 Identities=14% Similarity=0.093 Sum_probs=153.5
Q ss_pred cceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccccc
Q 012630 75 TQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P 152 (459)
.+|+++|+ ++..+.++. ...+..++|||||++|++.+... ....+++||+.+++.+.+...+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~----------~~~~i~~~d~~tg~~~~l~~~~------ 222 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES----------GRSALVIQTLANGAVRQVASFP------ 222 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT----------SSCEEEEEETTTCCEEEEECCS------
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecC----------CCcEEEEEECCCCcEEEeecCC------
Confidence 68999999 556777764 45668999999999999997431 1357899999877766665432
Q ss_pred ccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEE
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALV 232 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~ 232 (459)
.....+.|||||+ .|+++...++ ...||+++. .+++.+.|+........+.|+|||..|+
T Consensus 223 -------~~~~~~~~spdg~-~la~~~~~~g---------~~~i~~~d~---~~~~~~~l~~~~~~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 223 -------RHNGAPAFSPDGS-KLAFALSKTG---------SLNLYVMDL---ASGQIRQVTDGRSNNTEPTWFPDSQNLA 282 (415)
T ss_dssp -------SCEEEEEECTTSS-EEEEEECTTS---------SCEEEEEET---TTCCEEECCCCSSCEEEEEECTTSSEEE
T ss_pred -------CcccCEEEcCCCC-EEEEEEecCC---------CceEEEEEC---CCCCEEeCcCCCCcccceEECCCCCEEE
Confidence 2456789999999 7887764332 236899988 5557777776555677799999987666
Q ss_pred EEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCC--eeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCC
Q 012630 233 QETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPM--MRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEG 310 (459)
Q Consensus 233 ~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~--~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~g 310 (459)
+... +....+||++++.+++ .+.+... +..+ ..+++||+++++... +.
T Consensus 283 ~~s~-~~g~~~i~~~d~~~~~--~~~l~~~---------~~~~~~~~~spdG~~l~~~~~------------------~~ 332 (415)
T 2hqs_A 283 FTSD-QAGRPQVYKVNINGGA--PQRITWE---------GSQNQDADVSSDGKFMVMVSS------------------NG 332 (415)
T ss_dssp EEEC-TTSSCEEEEEETTSSC--CEECCCS---------SSEEEEEEECTTSSEEEEEEE------------------CS
T ss_pred EEEC-CCCCcEEEEEECCCCC--EEEEecC---------CCcccCeEECCCCCEEEEEEC------------------cC
Confidence 6553 2345689999987643 2433211 1111 246888886654431 11
Q ss_pred CcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcceeeccccc
Q 012630 311 DVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKCRQITDFP 389 (459)
Q Consensus 311 d~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~~~LT~~~ 389 (459)
....|+.+|+.+++.+.+.... ..+.+. ++.++..+++.. .......+|++++.++..++|+..+
T Consensus 333 g~~~i~~~d~~~~~~~~l~~~~---~~~~~~----------~spdg~~l~~~s-~~~~~~~l~~~d~~g~~~~~l~~~~ 397 (415)
T 2hqs_A 333 GQQHIAKQDLATGGVQVLSSTF---LDETPS----------LAPNGTMVIYSS-SQGMGSVLNLVSTDGRFKARLPATD 397 (415)
T ss_dssp SCEEEEEEETTTCCEEECCCSS---SCEEEE----------ECTTSSEEEEEE-EETTEEEEEEEETTSCCEEECCCSS
T ss_pred CceEEEEEECCCCCEEEecCCC---CcCCeE----------EcCCCCEEEEEE-cCCCccEEEEEECCCCcEEEeeCCC
Confidence 1235778888888876654332 122221 234455666554 3344568999998777777787654
No 14
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.55 E-value=6.2e-13 Score=130.53 Aligned_cols=152 Identities=18% Similarity=0.215 Sum_probs=101.0
Q ss_pred hhcceEEEcC-CCceeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 73 TTTQLVLATL-DGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
..++||++++ +|+.++| .....++|||||++|+|++.+.. ....+++++++++++.++++..+.
T Consensus 41 ~~~~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~--------~~~~~l~~~~~~~g~~~~l~~~~~---- 105 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEE--------KKVSEIWVADLETLSSKKILEAKN---- 105 (347)
T ss_dssp EEEEEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETT--------TTEEEEEEEETTTTEEEEEEEESE----
T ss_pred ccceEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccC--------CCcceEEEEECCCCceEEEEcCCC----
Confidence 3578999999 7888888 44578999999999999975421 023568999999888888876421
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccc---------------cCCCCeEEeccCCCCCCCCc-eEeccc
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVE---------------VSPRDIIYTQPAEPVEGEEP-EILHKL 215 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~---------------~~~~~~l~~~~~~pf~g~~~-~~L~~~ 215 (459)
...+.|||||+ .|+++......+.... ......||+++. .+++. +.|+.
T Consensus 106 ----------~~~~~wspdg~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~---~~~~~~~~l~~- 170 (347)
T 2gop_A 106 ----------IRSLEWNEDSR-KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT---ESEEVIEEFEK- 170 (347)
T ss_dssp ----------EEEEEECTTSS-EEEEEEECCCC---------CCCC---------CEEEEEEEET---TTTEEEEEEEE-
T ss_pred ----------ccceeECCCCC-EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC---CCCeEEeeecC-
Confidence 45789999999 7887753211100000 011357999988 66677 77765
Q ss_pred cceeccceeCCCCcEEEEEeecCC-----c-cEEEEEEcCCCCCCCceEEee
Q 012630 216 DLRFRGVSWCDDSLALVQETWFKT-----T-QTRTWLISPGSKDTAPLILFD 261 (459)
Q Consensus 216 ~~~~~~~~Ws~D~~al~~~~~~~~-----~-~~~ly~v~~~~~~~~~~~l~d 261 (459)
+ ....+.|++|| .++... .+. . ..+||.++ ++ +.+.|+.
T Consensus 171 ~-~~~~~~~spdg-~~~~~~-~~~~~~~~~~~~~l~~~d--~~--~~~~l~~ 215 (347)
T 2gop_A 171 P-RFSSGIWHRDK-IVVNVP-HREIIPQYFKFWDIYIWE--DG--KEEKMFE 215 (347)
T ss_dssp E-TTCEEEEETTE-EEEEEE-CCCSSCCSSCCEEEEEEE--TT--EEEEEEE
T ss_pred C-CcccccCCCCe-EEEEEe-cccccccccccccEEEeC--CC--ceEEecc
Confidence 4 66778999999 333222 221 2 57899998 33 2355543
No 15
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.49 E-value=3e-12 Score=127.48 Aligned_cols=259 Identities=8% Similarity=-0.025 Sum_probs=153.5
Q ss_pred hcceEEEcC-CCceeecCCCce-e-eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 74 TTQLVLATL-DGTVKEFGPPAI-Y-TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~~~~-~-~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
..|||++++ +|+.++++.... . ..+.|||||++|+|.+.. ..+++||+++++.+.+...+....
T Consensus 59 ~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~~~g~~~~~~~~~~~~~ 125 (388)
T 3pe7_A 59 PWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-------------RNLMRVDLATLEENVVYQVPAEWV 125 (388)
T ss_dssp SCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-------------TEEEEEETTTCCEEEEEECCTTEE
T ss_pred CceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-------------CeEEEEECCCCcceeeeechhhcc
Confidence 358999999 899999987432 2 368999999999999732 578999999888777766432100
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCC-ccc---------cccCCCCeEEeccCCCCCCCCceEeccccceec
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGG-AAK---------VEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFR 220 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g-~~~---------~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~ 220 (459)
....+..+|||. .|+..+..+.. .+. ........|+++++ .+++.+.|+.......
T Consensus 126 ----------~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~---~~g~~~~l~~~~~~~~ 191 (388)
T 3pe7_A 126 ----------GYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL---KTGESTVILQENQWLG 191 (388)
T ss_dssp ----------EEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET---TTCCEEEEEEESSCEE
T ss_pred ----------cccceeECCCCC-eeccccccCcccccccccchhhhhhccCCcceEEEEEC---CCCceEEeecCCcccc
Confidence 011223489998 55544422110 000 00123468999998 6668888887666678
Q ss_pred cceeCC-CCcEEEEEee--cCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCC--eeeCCCCCEEEEEeeeccCC
Q 012630 221 GVSWCD-DSLALVQETW--FKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPM--MRKSSTGTRVIAKIKKENDQ 295 (459)
Q Consensus 221 ~~~Ws~-D~~al~~~~~--~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~--~~~~~dg~~v~~~~~~~~~~ 295 (459)
.+.|+| ||..|++... .+....+||.++++++. .+.|+.... +..+ ..+++||+.|++....
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~-------~~~~~~~~~spdg~~l~~~~~~---- 258 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVKTHAE-------GESCTHEFWVPDGSALVYVSYL---- 258 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESCCCCT-------TEEEEEEEECTTSSCEEEEEEE----
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEeeeCCC-------CcccccceECCCCCEEEEEecC----
Confidence 899999 9855554432 11235679999987543 355532110 0011 2468888866443210
Q ss_pred CcEEEEEcCCCCCCCCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeec-----CCCCc
Q 012630 296 GTYILLNGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKES-----KTEIT 370 (459)
Q Consensus 296 ~~~ly~~~~g~s~~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s-----~~~P~ 370 (459)
.......|+.+|+++|+.+.+....+. .... .+. ....++.|+..+++.... .....
T Consensus 259 ------------~~~~~~~l~~~d~~~g~~~~l~~~~~~---~~~~--~~~-~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 259 ------------KGSPDRFIYSADPETLENRQLTSMPAC---SHLM--SNY-DGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp ------------TTCCCEEEEEECTTTCCEEEEEEECCE---EEEE--ECT-TSSEEEEEECCC------------CCCC
T ss_pred ------------CCCCcceEEEEecCCCceEEEEcCCCc---eeee--ecC-CCCeEccCCCcceeEeeeccccccCCCC
Confidence 011112488899999888776554321 1110 000 011245566777776532 25567
Q ss_pred ceEEEECCCcceeecccccC
Q 012630 371 QYWIQSWPHKKCRQITDFPH 390 (459)
Q Consensus 371 ely~~~~~~g~~~~LT~~~~ 390 (459)
++|++++.+++.++|+....
T Consensus 321 ~i~~~d~~~~~~~~l~~~~~ 340 (388)
T 3pe7_A 321 FLYVFNMKNGTQHRVARHDT 340 (388)
T ss_dssp EEEEEETTTTEEEEEEECCC
T ss_pred EEEEEeccCCceEEeccccC
Confidence 89999998888888987544
No 16
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.41 E-value=5.7e-11 Score=118.17 Aligned_cols=243 Identities=11% Similarity=0.010 Sum_probs=147.1
Q ss_pred cceEEEcC-CCceeecCCCc-eeee-----cccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccc
Q 012630 75 TQLVLATL-DGTVKEFGPPA-IYTA-----VEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPL 147 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~~~-~~~~-----~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~ 147 (459)
.++|+... ++++++|+... .... ++|||||++|+|.+.+ ....+++++|+++++.++++..+.
T Consensus 11 ~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~----------~g~~~l~~~d~~~g~~~~lt~~~~ 80 (388)
T 3pe7_A 11 FDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF----------DGPWNYYLLDLNTQVATQLTEGRG 80 (388)
T ss_dssp CEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT----------TSSCEEEEEETTTCEEEECCCSSC
T ss_pred ceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcC----------CCCceEEEEeCCCCceEEeeeCCC
Confidence 46777556 55788998743 2233 8999999999999742 123478999999999998887532
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccce-ecccee--
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLR-FRGVSW-- 224 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~-~~~~~W-- 224 (459)
.. ...+.|||||+ .|+|+.. ...|+.++. .+++.+.++..... .....|
T Consensus 81 ~~------------~~~~~~spdg~-~l~~~~~------------~~~l~~~d~---~~g~~~~~~~~~~~~~~~~~~~~ 132 (388)
T 3pe7_A 81 DN------------TFGGFLSPDDD-ALFYVKD------------GRNLMRVDL---ATLEENVVYQVPAEWVGYGTWVA 132 (388)
T ss_dssp BC------------SSSCEECTTSS-EEEEEET------------TTEEEEEET---TTCCEEEEEECCTTEEEEEEEEE
T ss_pred CC------------ccceEEcCCCC-EEEEEeC------------CCeEEEEEC---CCCcceeeeechhhcccccceeE
Confidence 11 11458999999 7888752 136888888 66687777654333 222444
Q ss_pred CCCCcEEEEEeec------------------CCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCCeeeCC-CCCEE
Q 012630 225 CDDSLALVQETWF------------------KTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSS-TGTRV 285 (459)
Q Consensus 225 s~D~~al~~~~~~------------------~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~~~~~~-dg~~v 285 (459)
++|+..++..... .....+||++++++++ .+.++...... ....++| ||+.|
T Consensus 133 ~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~-------~~~~~sp~dg~~l 203 (388)
T 3pe7_A 133 NSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--STVILQENQWL-------GHPIYRPYDDSTV 203 (388)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--EEEEEEESSCE-------EEEEEETTEEEEE
T ss_pred CCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--eEEeecCCccc-------cccEECCCCCCEE
Confidence 7887555532110 1234789999998753 35554321100 0124577 77765
Q ss_pred EEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeec
Q 012630 286 IAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKES 365 (459)
Q Consensus 286 ~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s 365 (459)
++.. .+. .+.....|+.+++++++.+.+........... .. ++.|+..|++....
T Consensus 204 ~~~~--------------~~~-~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~-~~---------~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 204 AFCH--------------EGP-HDLVDARMWLINEDGTNMRKVKTHAEGESCTH-EF---------WVPDGSALVYVSYL 258 (388)
T ss_dssp EEEE--------------CSC-TTTSSCSEEEEETTSCCCEESCCCCTTEEEEE-EE---------ECTTSSCEEEEEEE
T ss_pred EEEE--------------ecC-CCCCcceEEEEeCCCCceEEeeeCCCCccccc-ce---------ECCCCCEEEEEecC
Confidence 4432 110 11113358888888777776654331101111 11 34556778776554
Q ss_pred CCCC-cceEEEECCCcceeeccccc
Q 012630 366 KTEI-TQYWIQSWPHKKCRQITDFP 389 (459)
Q Consensus 366 ~~~P-~ely~~~~~~g~~~~LT~~~ 389 (459)
...+ ..+|++++.+|+.++|+.+.
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 259 KGSPDRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp TTCCCEEEEEECTTTCCEEEEEEEC
T ss_pred CCCCcceEEEEecCCCceEEEEcCC
Confidence 3333 25999999888888887654
No 17
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.40 E-value=1.2e-11 Score=135.04 Aligned_cols=125 Identities=12% Similarity=0.203 Sum_probs=83.0
Q ss_pred cceEEEcC-CCceeecCCCc-------eeeecccCCCCCeEEEEEeccC-cccccccCCCCcceEEEecCCceeeeeecc
Q 012630 75 TQLVLATL-DGTVKEFGPPA-------IYTAVEPSPDQKYILITSIDRP-YSFTVSYTKFPQKVQVWTADGKFVRQLCEL 145 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~~~-------~~~~~~~SPDG~~l~~~~~~~p-~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~ 145 (459)
+.|+++++ +|+.+.+.... ...+++|||||++|+|.+.... +. ..+..++++||+++++.++|+..
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r-----~~~~~~~~~~d~~~~~~~~l~~~ 110 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR-----HSYTASYDIYDLNKRQLITEERI 110 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS-----SCEEEEEEEEETTTTEECCSSCC
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE-----EccceEEEEEECCCCcEEEcccC
Confidence 35677777 66655443211 1134789999999999986432 10 11247789999998888777653
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc--------
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL-------- 217 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~-------- 217 (459)
+. ....+.|||||+ +|+|+. ...||+++. .+++.+.|+....
T Consensus 111 ~~-------------~~~~~~~SPdG~-~la~~~-------------~~~i~~~~~---~~~~~~~lt~~g~~~~~~~g~ 160 (740)
T 4a5s_A 111 PN-------------NTQWVTWSPVGH-KLAYVW-------------NNDIYVKIE---PNLPSYRITWTGKEDIIYNGI 160 (740)
T ss_dssp CT-------------TEEEEEECSSTT-CEEEEE-------------TTEEEEESS---TTSCCEECCSCCBTTTEEESB
T ss_pred CC-------------cceeeEECCCCC-EEEEEE-------------CCeEEEEEC---CCCceEEEcCCCCccceecCc
Confidence 22 345789999999 888874 135888888 6668888875221
Q ss_pred -----------eeccceeCCCCcEEEEE
Q 012630 218 -----------RFRGVSWCDDSLALVQE 234 (459)
Q Consensus 218 -----------~~~~~~Ws~D~~al~~~ 234 (459)
....+.|||||..|++.
T Consensus 161 ~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 161 TDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred ccccccchhcCCCcceEECCCCCEEEEE
Confidence 11247899998665554
No 18
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.36 E-value=2.7e-10 Score=107.47 Aligned_cols=236 Identities=13% Similarity=0.047 Sum_probs=143.5
Q ss_pred hhcceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeecccccc
Q 012630 73 TTTQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLVE 149 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~~ 149 (459)
..++|+++++ +|+.+.+.. ...+..++|||||++|++.. ...+++||+++ ++...+.....
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------------~~~i~~~d~~~~~~~~~~~~~~~-- 83 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS--------------EGLLYRLSLAGDPSPEKVDTGFA-- 83 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE--------------TTEEEEEESSSCCSCEECCCTTC--
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc--------------CCeEEEEeCCCCCCceEeccccc--
Confidence 3468999999 787776654 45568999999999998874 15789999987 76665543210
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCc
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~ 229 (459)
...+..+.|+|||+ .|++...... ....||.++. .+++.+.+.... ....+.|++|+.
T Consensus 84 ---------~~~~~~~~~spdg~-~l~~~~~~~~--------~~~~l~~~~~---~~~~~~~~~~~~-~~~~~~~spdg~ 141 (297)
T 2ojh_A 84 ---------TICNNDHGISPDGA-LYAISDKVEF--------GKSAIYLLPS---TGGTPRLMTKNL-PSYWHGWSPDGK 141 (297)
T ss_dssp ---------CCBCSCCEECTTSS-EEEEEECTTT--------SSCEEEEEET---TCCCCEECCSSS-SEEEEEECTTSS
T ss_pred ---------cccccceEECCCCC-EEEEEEeCCC--------CcceEEEEEC---CCCceEEeecCC-CccceEECCCCC
Confidence 12345789999999 7777653211 1457888887 555766666443 355679999986
Q ss_pred EEEEEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCC-CeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCC
Q 012630 230 ALVQETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLP-MMRKSSTGTRVIAKIKKENDQGTYILLNGRGATP 308 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~-~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~ 308 (459)
.|++... .....++|.++..++. .+.+... ++.. ...++++|+.+++...
T Consensus 142 ~l~~~~~-~~~~~~l~~~~~~~~~--~~~~~~~--------~~~~~~~~~s~dg~~l~~~~~------------------ 192 (297)
T 2ojh_A 142 SFTYCGI-RDQVFDIYSMDIDSGV--ETRLTHG--------EGRNDGPDYSPDGRWIYFNSS------------------ 192 (297)
T ss_dssp EEEEEEE-ETTEEEEEEEETTTCC--EEECCCS--------SSCEEEEEECTTSSEEEEEEC------------------
T ss_pred EEEEEEC-CCCceEEEEEECCCCc--ceEcccC--------CCccccceECCCCCEEEEEec------------------
Confidence 6654332 2455789999876532 2333211 1111 1245777765543321
Q ss_pred CCCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCC-------CCcceEEEECCCcc
Q 012630 309 EGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKT-------EITQYWIQSWPHKK 381 (459)
Q Consensus 309 ~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~-------~P~ely~~~~~~g~ 381 (459)
......|+.+++.++..+.+..... .... .. ++.++..+++...... ....++++++.+++
T Consensus 193 ~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~-~~---------~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 193 RTGQMQIWRVRVDGSSVERITDSAY--GDWF-PH---------PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp TTSSCEEEEEETTSSCEEECCCCSE--EEEE-EE---------ECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS
T ss_pred CCCCccEEEECCCCCCcEEEecCCc--ccCC-eE---------ECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC
Confidence 1112357777776666655533321 1111 11 2345566766655432 23679999988777
Q ss_pred eeeccc
Q 012630 382 CRQITD 387 (459)
Q Consensus 382 ~~~LT~ 387 (459)
.+.++.
T Consensus 261 ~~~~~~ 266 (297)
T 2ojh_A 261 VETLFD 266 (297)
T ss_dssp CEEEEE
T ss_pred ceeeec
Confidence 766664
No 19
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.35 E-value=3.1e-11 Score=120.02 Aligned_cols=250 Identities=9% Similarity=0.009 Sum_probs=140.2
Q ss_pred hcceEEEcC-CCceeecCCCcee-e-ecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 74 TTQLVLATL-DGTVKEFGPPAIY-T-AVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~~~~~-~-~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
..+||++++ +|+.++++..... . .+.|||||++|+|++.. .+++++|+++++.+.++..+..-
T Consensus 59 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-------------~~l~~~d~~~~~~~~~~~~~~~~- 124 (396)
T 3c5m_A 59 NRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-------------LNLMKVDLETLEEQVIYTVDEEW- 124 (396)
T ss_dssp SCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-------------TEEEEEETTTCCEEEEEECCTTE-
T ss_pred CceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-------------CcEEEEECCCCCcEEEEeccccc-
Confidence 468999999 8888888875432 2 48899999999999743 36899999988888777643210
Q ss_pred cc----cccccccc----ceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccc
Q 012630 151 IP----IAYNSVRE----GMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGV 222 (459)
Q Consensus 151 ~P----~~~~~~~~----~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~ 222 (459)
.| +.+.+... ......|+||++ .+++...... .....|++++. .+++.+.+.........+
T Consensus 125 ~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~-------~~~~~l~~~d~---~~g~~~~~~~~~~~~~~~ 193 (396)
T 3c5m_A 125 KGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHT-------NPTCRLIKVDI---ETGELEVIHQDTAWLGHP 193 (396)
T ss_dssp EEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHT-------CCCEEEEEEET---TTCCEEEEEEESSCEEEE
T ss_pred CCCCCEEEeccCCccccccccccccCCCCc-ceeeeeeccC-------CCcceEEEEEC---CCCcEEeeccCCcccccc
Confidence 00 00000000 000024555555 2222110000 12457999988 666888887666567788
Q ss_pred eeCC-CCcEEEEEee--cCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCC--eeeCCCCCEEEEEeeeccCCCc
Q 012630 223 SWCD-DSLALVQETW--FKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPM--MRKSSTGTRVIAKIKKENDQGT 297 (459)
Q Consensus 223 ~Ws~-D~~al~~~~~--~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~--~~~~~dg~~v~~~~~~~~~~~~ 297 (459)
.|++ |+..|++... .+....+||+++++++. .+.+... .++..+ ..+++||+++++....
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~-------~~~~~~~~~~~spdg~~l~~~~~~------ 258 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEH-------AEGESCTHEFWIPDGSAMAYVSYF------ 258 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCC-------CTTEEEEEEEECTTSSCEEEEEEE------
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeecc-------CCCccccceEECCCCCEEEEEecC------
Confidence 9999 6644443321 11122679999986532 3444220 011011 2457787765443210
Q ss_pred EEEEEcCCCCCCCCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCcccccc-CCCEEEEEeecCCCC-------
Q 012630 298 YILLNGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNL-NQLKILTSKESKTEI------- 369 (459)
Q Consensus 298 ~ly~~~~g~s~~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~-d~~~i~~~~~s~~~P------- 369 (459)
+ ......|+.+|+.+++.+.+...++ .. ..+ +. |+..+++ ..+. .|
T Consensus 259 -------~---~~~~~~l~~~d~~~g~~~~l~~~~~---~~--~~~---------s~~dg~~l~~-~~~~-~p~~~~~~~ 312 (396)
T 3c5m_A 259 -------K---GQTDRVIYKANPETLENEEVMVMPP---CS--HLM---------SNFDGSLMVG-DGCD-APVDVADAD 312 (396)
T ss_dssp -------T---TTCCEEEEEECTTTCCEEEEEECCS---EE--EEE---------ECSSSSEEEE-EECC-C--------
T ss_pred -------C---CCccceEEEEECCCCCeEEeeeCCC---CC--CCc---------cCCCCceEEE-ecCC-cceeecccc
Confidence 0 0111237888988888776654332 11 222 22 3454444 3333 44
Q ss_pred -------cceEEEECCCcceeeccccc
Q 012630 370 -------TQYWIQSWPHKKCRQITDFP 389 (459)
Q Consensus 370 -------~ely~~~~~~g~~~~LT~~~ 389 (459)
.++|++++.+++.++|+..+
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~~~l~~~~ 339 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSAQKLCKHS 339 (396)
T ss_dssp --CCCCCCEEEEEETTTTBCCEEEECC
T ss_pred ccccCCCCcEEEEecccCceEEccCCC
Confidence 78999998888888888754
No 20
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.34 E-value=2.7e-10 Score=123.17 Aligned_cols=268 Identities=12% Similarity=0.048 Sum_probs=145.5
Q ss_pred hcceEEEcC-CCceeecCCCce----eeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccc
Q 012630 74 TTQLVLATL-DGTVKEFGPPAI----YTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLV 148 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~~~~----~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~ 148 (459)
.++|+++++ +|+.++++.... +..++|||||++|+|++. .++++||+++++.++++.....
T Consensus 90 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--------------~~i~~~~~~~g~~~~~~~~~~~ 155 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--------------NNIYYCAHVGKQAIRVVSTGKE 155 (723)
T ss_dssp CSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--------------TEEEEESSSSSCCEEEECCCBT
T ss_pred eeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--------------CeEEEEECCCCceEEEecCCCC
Confidence 478999999 888888875332 568999999999999973 4689999998888877764211
Q ss_pred ccccccc------cccccceeeeEEecCCCceEEEEEeccCCccccc----------------------cCCCCeEEecc
Q 012630 149 ENIPIAY------NSVREGMRLISWRADRPSTLYWVETQDGGAAKVE----------------------VSPRDIIYTQP 200 (459)
Q Consensus 149 ~~~P~~~------~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~----------------------~~~~~~l~~~~ 200 (459)
....-+. ..+....+.+.|||||+ .|++....+....... ......|++++
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d 234 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIG 234 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEE
T ss_pred CceECcccceeEEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEE
Confidence 1000000 00011336899999999 7877754321110000 00123788888
Q ss_pred CCCCCCCCc-eEeccc------cceeccceeCCCCcEEEEEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCC
Q 012630 201 AEPVEGEEP-EILHKL------DLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGL 273 (459)
Q Consensus 201 ~~pf~g~~~-~~L~~~------~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~ 273 (459)
. .+++. +.|... ......+.|||||..|++...+......||++++++++ .+.+..... ..+.+...
T Consensus 235 ~---~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~--~~~~~~~~~-~~~~~~~~ 308 (723)
T 1xfd_A 235 L---NGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV--CTKKHEDES-EAWLHRQN 308 (723)
T ss_dssp S---SSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC--EEEEEEEEC-SSCCCCCC
T ss_pred C---CCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc--ceEEEEecc-CCEEeccC
Confidence 8 55453 555432 33456789999997665544333456789999987653 233322110 01111000
Q ss_pred CCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEE-CCCCc---eEEEeecCcccceEEEEEeecCCCc
Q 012630 274 PMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFN-INTGS---KERIWESDKEKYYETAVALNLDQSV 349 (459)
Q Consensus 274 ~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~-l~tg~---~~~l~~~~~~~~~e~~~~~~~~~~~ 349 (459)
....+++||+.+++.. +...........|+.+| +.+++ .+.+..... .......
T Consensus 309 ~~~~~spdg~~l~~~~-------------~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~--~~~~~~~------- 366 (723)
T 1xfd_A 309 EEPVFSKDGRKFFFIR-------------AIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDW--DVTKILA------- 366 (723)
T ss_dssp CCCEECTTSCSEEEEE-------------EECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSS--CEEEEEE-------
T ss_pred CCceEcCCCCeEEEEE-------------ecccCCCcceeEEEEEeccCCCCccceeEeecCCe--EEEeeeE-------
Confidence 1225688888664431 10000011234577788 45555 444433221 1112122
Q ss_pred cccccCCCEEEEEeecCCCCcc--eEEEECCCc-ceeeccc
Q 012630 350 GDVNLNQLKILTSKESKTEITQ--YWIQSWPHK-KCRQITD 387 (459)
Q Consensus 350 ~~~~~d~~~i~~~~~s~~~P~e--ly~~~~~~g-~~~~LT~ 387 (459)
++.|++.|++... ...|.. +|.++..++ +.++|+.
T Consensus 367 --~spdg~~l~~~~~-~~~~~~~~l~~~~~~~~~~~~~l~~ 404 (723)
T 1xfd_A 367 --YDEKGNKIYFLST-EDLPRRRQLYSANTVGNFNRQCLSC 404 (723)
T ss_dssp --EETTTTEEEEEES-SSCTTCCEEEEECSSTTCCCBCSST
T ss_pred --EcCCCCEEEEEEc-CCCCcceEEEEEeCCCCCCcceecc
Confidence 3445567766553 333444 555554433 4555663
No 21
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.33 E-value=3.3e-11 Score=130.61 Aligned_cols=123 Identities=14% Similarity=0.260 Sum_probs=85.2
Q ss_pred cceEEEcC-CCceeecCCCc-e----eeecccCCCCCeEEEEEeccC-cccccccCCCCcceEEEecCCcee---eeeec
Q 012630 75 TQLVLATL-DGTVKEFGPPA-I----YTAVEPSPDQKYILITSIDRP-YSFTVSYTKFPQKVQVWTADGKFV---RQLCE 144 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~~~-~----~~~~~~SPDG~~l~~~~~~~p-~s~~v~~~~~~~~~~v~d~~g~~~---~~lt~ 144 (459)
+.|+++++ +|+.+++.... . +..++|||||++|+|.+.... +.+ .....+++||+++++. +++.
T Consensus 36 ~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~-----s~~~~i~~~d~~~g~~~~~~~l~- 109 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRY-----SYTATYYIYDLSNGEFVRGNELP- 109 (719)
T ss_dssp SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSS-----CEEEEEEEEETTTTEECCSSCCC-
T ss_pred CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEe-----ecceEEEEEECCCCccccceecC-
Confidence 47889999 88888877643 2 578999999999999975321 110 1236899999998776 4332
Q ss_pred ccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc-------
Q 012630 145 LPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL------- 217 (459)
Q Consensus 145 ~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~------- 217 (459)
.....+.|||||+ .|+++. ...|++++. .+++.+.|+....
T Consensus 110 ---------------~~~~~~~~SPDG~-~la~~~-------------~~~i~~~~~---~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 110 ---------------RPIQYLCWSPVGS-KLAYVY-------------QNNIYLKQR---PGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp ---------------SSBCCEEECSSTT-CEEEEE-------------TTEEEEESS---TTSCCEECCCCCBTTTEEES
T ss_pred ---------------cccccceECCCCC-EEEEEE-------------CCeEEEEeC---CCCCcEEEecCCCcCCeEcc
Confidence 1345789999999 788773 126888887 5557777763221
Q ss_pred ------------eeccceeCCCCcEEEEEe
Q 012630 218 ------------RFRGVSWCDDSLALVQET 235 (459)
Q Consensus 218 ------------~~~~~~Ws~D~~al~~~~ 235 (459)
....+.|||||..|++..
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEE
Confidence 114689999986666544
No 22
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.32 E-value=1.2e-10 Score=118.47 Aligned_cols=192 Identities=19% Similarity=0.174 Sum_probs=126.9
Q ss_pred cceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccccc
Q 012630 75 TQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P 152 (459)
.+|+++|+ +|+.+.+.. .+.+..++|||||++|+|+... ....++++||+.++..+.++...
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~----------~g~~~i~~~d~~~~~~~~l~~~~------ 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSK----------TGSLNLYVMDLASGQIRQVTDGR------ 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECT----------TSSCEEEEEETTTCCEEECCCCS------
T ss_pred cEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEec----------CCCceEEEEECCCCCEEeCcCCC------
Confidence 58999999 888887765 4566899999999999988642 12356999999877776665532
Q ss_pred ccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEE
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALV 232 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~ 232 (459)
.....+.|+|||+ .|++....+ + ...||.++. .+++.+.++........+.|+|||..|+
T Consensus 267 -------~~~~~~~~spdg~-~l~~~s~~~-g--------~~~i~~~d~---~~~~~~~l~~~~~~~~~~~~spdG~~l~ 326 (415)
T 2hqs_A 267 -------SNNTEPTWFPDSQ-NLAFTSDQA-G--------RPQVYKVNI---NGGAPQRITWEGSQNQDADVSSDGKFMV 326 (415)
T ss_dssp -------SCEEEEEECTTSS-EEEEEECTT-S--------SCEEEEEET---TSSCCEECCCSSSEEEEEEECTTSSEEE
T ss_pred -------CcccceEECCCCC-EEEEEECCC-C--------CcEEEEEEC---CCCCEEEEecCCCcccCeEECCCCCEEE
Confidence 2345789999999 777765321 1 347999988 6657777765555566789999986666
Q ss_pred EEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCc
Q 012630 233 QETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDV 312 (459)
Q Consensus 233 ~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~ 312 (459)
+... +.....|+++++.+++ .+.|.... ......+++||+.+++... ++..
T Consensus 327 ~~~~-~~g~~~i~~~d~~~~~--~~~l~~~~--------~~~~~~~spdg~~l~~~s~------------------~~~~ 377 (415)
T 2hqs_A 327 MVSS-NGGQQHIAKQDLATGG--VQVLSSTF--------LDETPSLAPNGTMVIYSSS------------------QGMG 377 (415)
T ss_dssp EEEE-CSSCEEEEEEETTTCC--EEECCCSS--------SCEEEEECTTSSEEEEEEE------------------ETTE
T ss_pred EEEC-cCCceEEEEEECCCCC--EEEecCCC--------CcCCeEEcCCCCEEEEEEc------------------CCCc
Confidence 5543 2345679999987643 24332111 0111356888886654431 1123
Q ss_pred ceEEEEECCCCceEEEeec
Q 012630 313 PFLDLFNINTGSKERIWES 331 (459)
Q Consensus 313 ~~l~~~~l~tg~~~~l~~~ 331 (459)
..|+.+|++++..+.|-..
T Consensus 378 ~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 378 SVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp EEEEEEETTSCCEEECCCS
T ss_pred cEEEEEECCCCcEEEeeCC
Confidence 3577788876666655443
No 23
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.30 E-value=4.9e-10 Score=121.02 Aligned_cols=264 Identities=8% Similarity=0.017 Sum_probs=149.7
Q ss_pred HHhhcceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-----ceeeeee
Q 012630 71 HYTTTQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-----KFVRQLC 143 (459)
Q Consensus 71 ~~~~sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-----~~~~~lt 143 (459)
+-..+.|+++++ +|+.++++. ......++|||||++|+|+. ...+++|++.+ ++.++++
T Consensus 97 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~--------------~~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 97 LFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR--------------NHNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp EEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE--------------TTEEEEEECBCTTSCCCCCEESC
T ss_pred EEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE--------------CCeEEEEecCcccccCCCcEEec
Confidence 334589999999 888887765 34567899999999999974 15789999987 7777666
Q ss_pred cccccc---cccccccccccceeeeEEecCCCceEEEEEeccCCccccc---------------------cCCCCeEEec
Q 012630 144 ELPLVE---NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVE---------------------VSPRDIIYTQ 199 (459)
Q Consensus 144 ~~p~~~---~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~---------------------~~~~~~l~~~ 199 (459)
...... ..|+ +......++.+.|||||+ .|++....+.+.+... ......|+++
T Consensus 163 ~~~~~~~~~g~~~-~~ee~~~~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~ 240 (706)
T 2z3z_A 163 IDGTETLVYGQAV-HQREFGIEKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIY 240 (706)
T ss_dssp SCCBTTEEESSCC-GGGCTTCCCSEEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEE
T ss_pred cCCCCCeEcccch-hhhhcCCCceEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEE
Confidence 532210 0000 000011246889999999 7877753322111000 0113578899
Q ss_pred cCCCCCCCCceEeccc---cceeccceeCCCCcEEEEEe-ecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCC
Q 012630 200 PAEPVEGEEPEILHKL---DLRFRGVSWCDDSLALVQET-WFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPM 275 (459)
Q Consensus 200 ~~~pf~g~~~~~L~~~---~~~~~~~~Ws~D~~al~~~~-~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~ 275 (459)
++ .+++.+.+... ......+.|+|||..|++.. ........++++++.+++ ..+.+..... ..+.++.. .
T Consensus 241 d~---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~-~~~~~~~~-~ 314 (706)
T 2z3z_A 241 HL---ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETD-KHYVEPLH-P 314 (706)
T ss_dssp ET---TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEEC-SSCCCCCS-C
T ss_pred EC---CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccC-CCeECccC-C
Confidence 88 66566666532 23356789999986555433 223455689999987652 2344432110 11111111 1
Q ss_pred eeeCC--CCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccc
Q 012630 276 MRKSS--TGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVN 353 (459)
Q Consensus 276 ~~~~~--dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~ 353 (459)
..+++ ||++++.. . .+ ....|+.+++.++..+.+..... ....+.. ++
T Consensus 315 ~~~sp~~dg~~l~~~--------------~----~~-g~~~l~~~~~~~~~~~~l~~~~~--~v~~~~~---------~s 364 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQS--------------R----RD-GWNHLYLYDTTGRLIRQVTKGEW--EVTNFAG---------FD 364 (706)
T ss_dssp CEECTTCSSEEEEEE--------------C----TT-SSCEEEEEETTSCEEEECCCSSS--CEEEEEE---------EC
T ss_pred ceeecCCCCEEEEEE--------------c----cC-CccEEEEEECCCCEEEecCCCCe--EEEeeeE---------Ec
Confidence 24567 77633221 1 11 23467788866555555543332 1222122 23
Q ss_pred cCCCEEEEEeecCCCC--cceEEEECCCcceeeccc
Q 012630 354 LNQLKILTSKESKTEI--TQYWIQSWPHKKCRQITD 387 (459)
Q Consensus 354 ~d~~~i~~~~~s~~~P--~ely~~~~~~g~~~~LT~ 387 (459)
.+++.+++.. +...| ..+|.++..+++.++|+.
T Consensus 365 pdg~~l~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~ 399 (706)
T 2z3z_A 365 PKGTRLYFES-TEASPLERHFYCIDIKGGKTKDLTP 399 (706)
T ss_dssp TTSSEEEEEE-SSSCTTCBEEEEEETTCCCCEESCC
T ss_pred CCCCEEEEEe-cCCCCceEEEEEEEcCCCCceeccC
Confidence 3456666655 44444 378888887777777774
No 24
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.30 E-value=1.9e-10 Score=124.86 Aligned_cols=215 Identities=12% Similarity=0.041 Sum_probs=123.2
Q ss_pred eeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc---eeeeeecccccccccccccccccceeeeEEecCC
Q 012630 95 YTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK---FVRQLCELPLVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 95 ~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~---~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
+..++|||||++|+|.+. ..+++||++++ ..++++.. ...+..+.|||||
T Consensus 111 v~~~~~SpDg~~l~~~~~--------------~~i~~~d~~~~~~~~~~~l~~~-------------~~~~~~~~~SPDG 163 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--------------GELYLYDLKQEGKAAVRQLTHG-------------EGFATDAKLSPKG 163 (741)
T ss_dssp SCCCEECTTSSEEEEEET--------------TEEEEEESSSCSTTSCCBCCCS-------------SSCEEEEEECTTS
T ss_pred cceeEECCCCCEEEEEeC--------------CcEEEEECCCCCcceEEEcccC-------------CcccccccCCCCC
Confidence 578999999999999962 57899999877 66655542 2245688999999
Q ss_pred CceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccce-----------------eccceeCCCCcEEEEE
Q 012630 172 PSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLR-----------------FRGVSWCDDSLALVQE 234 (459)
Q Consensus 172 ~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~-----------------~~~~~Ws~D~~al~~~ 234 (459)
+ .|+++.. +.|++++. .+++.+.++..... ...+.|||||..|++.
T Consensus 164 ~-~la~~~~-------------~~i~~~d~---~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~ 226 (741)
T 2ecf_A 164 G-FVSFIRG-------------RNLWVIDL---ASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYA 226 (741)
T ss_dssp S-EEEEEET-------------TEEEEEET---TTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEE
T ss_pred C-EEEEEeC-------------CcEEEEec---CCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEE
Confidence 9 7887741 26888888 66577777653221 3568999998555543
Q ss_pred eecCC-----------------------------ccEEEEEEcCCC-CCCCceEEeecCCCCccCCCCCC--CeeeCCCC
Q 012630 235 TWFKT-----------------------------TQTRTWLISPGS-KDTAPLILFDRSSEDVYSDPGLP--MMRKSSTG 282 (459)
Q Consensus 235 ~~~~~-----------------------------~~~~ly~v~~~~-~~~~~~~l~d~~~~d~y~~pg~~--~~~~~~dg 282 (459)
..... ....||++++.+ ++ .+.+..... .... ...+ +||
T Consensus 227 ~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~--~~~~~~~~~------~~~~~~~~~~-pDg 297 (741)
T 2ecf_A 227 RIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ--TQWIDLGKE------QDIYLARVNW-RDP 297 (741)
T ss_dssp EEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC--CEEECCCSC------SSEEEEEEEE-EET
T ss_pred EEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc--eEEecCCCC------cceEEEEEEe-CCC
Confidence 32110 223788888775 43 233321100 0000 1235 777
Q ss_pred CEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEE
Q 012630 283 TRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTS 362 (459)
Q Consensus 283 ~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~ 362 (459)
+++++...+ .......|+.+|+.+++.+.++.......+..+ ....++.|+. +++.
T Consensus 298 ~~l~~~~~~----------------~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~-------~~~~~spdg~-~~~~ 353 (741)
T 2ecf_A 298 QHLSFQRQS----------------RDQKKLDLVEVTLASNQQRVLAHETSPTWVPLH-------NSLRFLDDGS-ILWS 353 (741)
T ss_dssp TEEEEEEEE----------------TTSSEEEEEEEETTTCCEEEEEEEECSSCCCCC-------SCCEECTTSC-EEEE
T ss_pred CEEEEEEec----------------ccCCeEEEEEEECCCCceEEEEEcCCCCcCCcC-------CceEECCCCe-EEEE
Confidence 766543211 011223577788888887766553311010000 0011344444 5554
Q ss_pred eecCCCCcceEEEECCCcceeecccc
Q 012630 363 KESKTEITQYWIQSWPHKKCRQITDF 388 (459)
Q Consensus 363 ~~s~~~P~ely~~~~~~g~~~~LT~~ 388 (459)
.+ ...-..||.++..++ .++||..
T Consensus 354 ~~-~~g~~~l~~~~~~~~-~~~l~~~ 377 (741)
T 2ecf_A 354 SE-RTGFQHLYRIDSKGK-AAALTHG 377 (741)
T ss_dssp EC-TTSSCEEEEECSSSC-EEESCCS
T ss_pred ec-CCCccEEEEEcCCCC-eeeeeec
Confidence 43 333456888776544 6667653
No 25
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.26 E-value=7.6e-10 Score=118.56 Aligned_cols=256 Identities=13% Similarity=0.079 Sum_probs=149.0
Q ss_pred hcceEEEcCCCceeecCCCc-eee---------ecccC--CCCCe-EEEEEeccCcccccccCCCCcceEEEecC--C-c
Q 012630 74 TTQLVLATLDGTVKEFGPPA-IYT---------AVEPS--PDQKY-ILITSIDRPYSFTVSYTKFPQKVQVWTAD--G-K 137 (459)
Q Consensus 74 ~sqL~~v~~~G~~~~l~~~~-~~~---------~~~~S--PDG~~-l~~~~~~~p~s~~v~~~~~~~~~~v~d~~--g-~ 137 (459)
+..||.+..+|+.++|+... .+. .+.|| |||++ |+|++.+ ..+||+++++ | +
T Consensus 48 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~------------~~~l~~~~~~~~g~~ 115 (662)
T 3azo_A 48 RATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG------------DQRLYAFEPDAPGGA 115 (662)
T ss_dssp EEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT------------TCCEEEECTTSTTCC
T ss_pred cEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC------------CCeEEEEcCCCCCCC
Confidence 56788884488888888643 223 45565 99999 9988532 3578999988 6 7
Q ss_pred eeeeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCC------CCceE
Q 012630 138 FVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG------EEPEI 211 (459)
Q Consensus 138 ~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g------~~~~~ 211 (459)
..++|+..+... .......+.|||||+ .|+++.....+.. .......||+++. .+ ++.+.
T Consensus 116 ~~~~l~~~~~~~--------~~~~~~~~~~spDg~-~l~~~~~~~~~~~--~~~~~~~i~~~~~---~~~~~~~~~~~~~ 181 (662)
T 3azo_A 116 VPRPLTPVSAVG--------GGLRWADPVLLPERG-EVWCMAEEFTGEG--PSDVRRFLAAVPL---DGSAAADRSAVRE 181 (662)
T ss_dssp CCEECSCCCCST--------TCEEEEEEEEETTTT-EEEEEEEEECSSS--TTCEEEEEEEEET---TSTTTTCGGGSEE
T ss_pred CCEeccCCccCC--------CCccccCcEECCCCC-EEEEEEecccCCC--CCCceeEEEEEEC---CCCccccCCceeE
Confidence 777787643100 012345789999999 8888764311100 0011357999998 66 67888
Q ss_pred ec-cccceeccceeCCCCcEEEEEeecCC----ccEEEEEEcCC-CCC-CCceEEeecCCCCccCCCCCCCeeeCCCCCE
Q 012630 212 LH-KLDLRFRGVSWCDDSLALVQETWFKT----TQTRTWLISPG-SKD-TAPLILFDRSSEDVYSDPGLPMMRKSSTGTR 284 (459)
Q Consensus 212 L~-~~~~~~~~~~Ws~D~~al~~~~~~~~----~~~~ly~v~~~-~~~-~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~ 284 (459)
|+ ........+.|||||..|++..+... ....||+++++ ++. ...+.++....... ....+++||+
T Consensus 182 l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~------~~~~~spdg~- 254 (662)
T 3azo_A 182 LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI------AQAEWAPDGS- 254 (662)
T ss_dssp SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE------EEEEECTTSC-
T ss_pred EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE------cceEECCCCe-
Confidence 88 65556778999999966665543221 34679999887 331 13455543210000 0124577776
Q ss_pred EEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCCCceEEEeecCcccceEEEEEeecCC-CccccccCCCEEEEEe
Q 012630 285 VIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQ-SVGDVNLNQLKILTSK 363 (459)
Q Consensus 285 v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~-~~~~~~~d~~~i~~~~ 363 (459)
++ +.+. .+ +...|+++|+++++.+.+...... .. .. .. ... ....++ +++++++..
T Consensus 255 l~--------------~~~~---~~-~~~~l~~~~~~~~~~~~l~~~~~~-~~-~p-~w-~~~~~~~~~~-~~~~~~~~~ 311 (662)
T 3azo_A 255 LI--------------VATD---RT-GWWNLHRVDPATGAATQLCRREEE-FA-GP-LW-TPGMRWFAPL-ANGLIAVVH 311 (662)
T ss_dssp EE--------------EEEC---TT-SSCEEEEECTTTCCEEESSCCSSB-SS-CC-CC-STTCCSEEEC-TTSCEEEEE
T ss_pred EE--------------EEEC---CC-CCeEEEEEECCCCceeeccccccc-cc-Cc-cc-cccCceEeEe-CCCEEEEEE
Confidence 32 3221 11 123588888877877766543321 00 00 00 000 000011 135677666
Q ss_pred ecCCCCcceEEEECCCcceeeccc
Q 012630 364 ESKTEITQYWIQSWPHKKCRQITD 387 (459)
Q Consensus 364 ~s~~~P~ely~~~~~~g~~~~LT~ 387 (459)
.. .-..||+++..+++.++|+.
T Consensus 312 ~~--~~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 312 GK--GAAVLGILDPESGELVDAAG 333 (662)
T ss_dssp BS--SSCEEEEEETTTTEEEECCS
T ss_pred Ec--CccEEEEEECCCCcEEEecC
Confidence 54 55678888987777777765
No 26
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.22 E-value=2.5e-09 Score=106.04 Aligned_cols=203 Identities=16% Similarity=0.152 Sum_probs=122.6
Q ss_pred hhcceEEEcC-CCceeecCC-CceeeecccCC-CCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccc
Q 012630 73 TTTQLVLATL-DGTVKEFGP-PAIYTAVEPSP-DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVE 149 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~-~~~~~~~~~SP-DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~ 149 (459)
...+|+++++ +|+.+.+.. ...+..+.||| ||++|+|++. .+. .....++++++++|+..+.++...
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~-~~~------~~~~~~l~~~d~~~~~~~~l~~~~--- 235 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE-GPH------DLVDARMWLVNEDGSNVRKIKEHA--- 235 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC-SCS------SSCSCCCEEEETTSCCCEESSCCC---
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEec-CCC------CCCCceEEEEECCCCceeEeeccC---
Confidence 5679999999 888887764 34457899999 8999999974 211 112367899999887776665410
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCC-CC
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCD-DS 228 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~-D~ 228 (459)
+ ...+..+.|||||+ .|+++...++. ....|++++. .+++.+.+...+. .. +.|++ ||
T Consensus 236 --~------~~~~~~~~~spdg~-~l~~~~~~~~~-------~~~~l~~~d~---~~g~~~~l~~~~~-~~-~~~s~~dg 294 (396)
T 3c5m_A 236 --E------GESCTHEFWIPDGS-AMAYVSYFKGQ-------TDRVIYKANP---ETLENEEVMVMPP-CS-HLMSNFDG 294 (396)
T ss_dssp --T------TEEEEEEEECTTSS-CEEEEEEETTT-------CCEEEEEECT---TTCCEEEEEECCS-EE-EEEECSSS
T ss_pred --C------CccccceEECCCCC-EEEEEecCCCC-------ccceEEEEEC---CCCCeEEeeeCCC-CC-CCccCCCC
Confidence 0 11345679999999 77777533221 1234899987 5557777764432 33 89999 98
Q ss_pred cEEEEEee------------cCCccEEEEEEcCCCCCCCceEEeecCCC------CccCCCCCCCeeeCCCCCEEEEEee
Q 012630 229 LALVQETW------------FKTTQTRTWLISPGSKDTAPLILFDRSSE------DVYSDPGLPMMRKSSTGTRVIAKIK 290 (459)
Q Consensus 229 ~al~~~~~------------~~~~~~~ly~v~~~~~~~~~~~l~d~~~~------d~y~~pg~~~~~~~~dg~~v~~~~~ 290 (459)
..|++... .......+|++++.++. .+.|...... +.+.... ...+++||+.|++
T Consensus 295 ~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~--- 367 (396)
T 3c5m_A 295 SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS--AQKLCKHSTSWDVLDGDRQITHP--HPSFTPNDDGVLF--- 367 (396)
T ss_dssp SEEEEEECCC----------CCCCCCEEEEEETTTTB--CCEEEECCCCCCCBTTBSSTTCC--CCEECTTSSEEEE---
T ss_pred ceEEEecCCcceeeccccccccCCCCcEEEEecccCc--eEEccCCCCccccccccccCCCC--CceEccCCCeEEE---
Confidence 66655321 01234679999987653 3555432210 0000011 1245777775543
Q ss_pred eccCCCcEEEEEcCCCCCCCCcceEEEEECCCCceEEE
Q 012630 291 KENDQGTYILLNGRGATPEGDVPFLDLFNINTGSKERI 328 (459)
Q Consensus 291 ~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~tg~~~~l 328 (459)
.+. ....+.|+.+++.+++.+.+
T Consensus 368 -----------~s~----~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 368 -----------TSD----FEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp -----------EEC----TTSSCEEEEEECCTTCC---
T ss_pred -----------Eec----CCCCceEEEEEEcccccccc
Confidence 321 12245688899887766544
No 27
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=99.21 E-value=4.1e-09 Score=114.27 Aligned_cols=83 Identities=16% Similarity=0.074 Sum_probs=71.1
Q ss_pred cCCCEEEEEeecCCCCcceEEEECCCcceeecccccCCCCCCcCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceE
Q 012630 354 LNQLKILTSKESKTEITQYWIQSWPHKKCRQITDFPHPYPLLSTLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLC 433 (459)
Q Consensus 354 ~d~~~i~~~~~s~~~P~ely~~~~~~g~~~~LT~~~~~~~~~~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~ 433 (459)
.+++.+++..++.++|+++|.++.. ++.++|+..+..+....+ .+|.|+|++.||.+|+++|++|+++++++ ++|+
T Consensus 405 ~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~~~~~~~~~-~~e~v~~~s~DG~~i~~~l~~P~~~~~~~--~~P~ 480 (711)
T 4hvt_A 405 EEEEEALITIENSIVPPTIYLWVKT-HELKIIRKALYSFDSENY-VLEQKEATSFDGVKIPYFLVYKKGIKFDG--KNPT 480 (711)
T ss_dssp TTCSCEEEEEECSSSCCEEEEECTT-SCEEEEECCSSCCCGGGE-EEEEEEEECTTSCEEEEEEEEETTCCCSS--CCCE
T ss_pred CcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEecCCcccCcccC-eeEEEEEECCCCeEEEEEEEecCCCCCCC--CccE
Confidence 3567899999999999999999987 788888887655554334 89999999999999999999999987554 8999
Q ss_pred EEEEcCC
Q 012630 434 LFWAYPG 440 (459)
Q Consensus 434 Il~~Yp~ 440 (459)
||++|..
T Consensus 481 vl~~HGG 487 (711)
T 4hvt_A 481 LLEAYGG 487 (711)
T ss_dssp EEECCCC
T ss_pred EEEECCC
Confidence 9999985
No 28
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.09 E-value=4e-09 Score=119.51 Aligned_cols=116 Identities=12% Similarity=0.103 Sum_probs=75.7
Q ss_pred cceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccccc
Q 012630 75 TQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P 152 (459)
++||++++ +|++++|+. ...+..++|||||++|||.+...+- ....++++|+++|++.++|+..+....
T Consensus 33 ~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~-------~~~~~i~~~d~~~g~~~~lt~~~~~~~-- 103 (1045)
T 1k32_A 33 DDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSS-------LNTADLYFYNGENGEIKRITYFSGKST-- 103 (1045)
T ss_dssp TEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTT-------CCEEEEEEEETTTTEEEECCCCCEEEE--
T ss_pred CcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccC-------CCCCeEEEEECCCCCeEEcccCCCccc--
Confidence 58999999 889999887 4567899999999999999754210 123579999999988888876432110
Q ss_pred ccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEec
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILH 213 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~ 213 (459)
+.......+.|||||+ |+++...+... .....||.++. .+++.+.|+
T Consensus 104 ----~~~~~~~~~~~SpDg~--ll~~~~~~~~~-----~~~~~l~~~~~---~~g~~~~l~ 150 (1045)
T 1k32_A 104 ----GRRMFTDVAGFDPDGN--LIISTDAMQPF-----SSMTCLYRVEN---DGINFVPLN 150 (1045)
T ss_dssp ----TTEECSEEEEECTTCC--EEEEECTTSSS-----TTCCEEEEEEG---GGTEEEECC
T ss_pred ----ccccccccccCCCCCE--EEEEECCcCCC-----cccceEEEEEC---CCCCeEEec
Confidence 0011236789999998 55554322110 11245676665 444544443
No 29
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.04 E-value=1.5e-08 Score=114.78 Aligned_cols=236 Identities=12% Similarity=0.034 Sum_probs=146.8
Q ss_pred hhcceEEEcC-CCceeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 73 TTTQLVLATL-DGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
.+.+||.+++ ++..++++....+..+.|||||++|++.. ...+++|+++++.+..+.... ....
T Consensus 224 g~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~--------------~~~i~~~d~~~~~l~~l~~~~-~~~~ 288 (1045)
T 1k32_A 224 GFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSK--------------GGSIYIFNPDTEKIEKIEIGD-LESP 288 (1045)
T ss_dssp SSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEE--------------TTEEEEECTTTCCEEECCCCC-CCBC
T ss_pred CceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEe--------------CCEEEEecCCceEeeeeccCc-cccc
Confidence 3568999998 66788888765556789999999999974 256899998665554433210 0000
Q ss_pred cccccccccceeeeEEe-cCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc-eeccceeCCCCc
Q 012630 152 PIAYNSVREGMRLISWR-ADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL-RFRGVSWCDDSL 229 (459)
Q Consensus 152 P~~~~~~~~~~r~~~Ws-pDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~-~~~~~~Ws~D~~ 229 (459)
+ .+......+..+.|| |||+ .|++.. +..|++++. .+++.+.+..... ....+.|+ ||.
T Consensus 289 ~-~~~~~~~~v~~~~~S~pdG~-~la~~~-------------~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~s-dg~ 349 (1045)
T 1k32_A 289 E-DRIISIPSKFAEDFSPLDGD-LIAFVS-------------RGQAFIQDV---SGTYVLKVPEPLRIRYVRRGGD-TKV 349 (1045)
T ss_dssp C-SEEEECGGGGEEEEEECGGG-CEEEEE-------------TTEEEEECT---TSSBEEECSCCSCEEEEEECSS-SEE
T ss_pred c-cccccccccceeeecCCCCC-EEEEEE-------------cCEEEEEcC---CCCceEEccCCCcceEEeeeEc-CCC
Confidence 0 001112356789999 9999 777664 236888887 5557777765554 67789999 986
Q ss_pred EEEEEeecCCccEEEE-EEcCCCCCCCceEEeecCCCCccCCCCCC-CeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCC
Q 012630 230 ALVQETWFKTTQTRTW-LISPGSKDTAPLILFDRSSEDVYSDPGLP-MMRKSSTGTRVIAKIKKENDQGTYILLNGRGAT 307 (459)
Q Consensus 230 al~~~~~~~~~~~~ly-~v~~~~~~~~~~~l~d~~~~d~y~~pg~~-~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s 307 (459)
.|++... ..++| ++++.++. .+.+... .... ...+++||+++++...
T Consensus 350 ~l~~~s~----~~~l~~~~d~~~~~--~~~l~~~--------~~~~~~~~~SpDG~~la~~~~----------------- 398 (1045)
T 1k32_A 350 AFIHGTR----EGDFLGIYDYRTGK--AEKFEEN--------LGNVFAMGVDRNGKFAVVAND----------------- 398 (1045)
T ss_dssp EEEEEET----TEEEEEEEETTTCC--EEECCCC--------CCSEEEEEECTTSSEEEEEET-----------------
T ss_pred eEEEEEC----CCceEEEEECCCCC--ceEecCC--------ccceeeeEECCCCCEEEEECC-----------------
Confidence 6665542 35788 88876542 3433210 0111 1246888886654321
Q ss_pred CCCCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecC------CCCcceEEEECCCcc
Q 012630 308 PEGDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESK------TEITQYWIQSWPHKK 381 (459)
Q Consensus 308 ~~gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~------~~P~ely~~~~~~g~ 381 (459)
+ ..|..+|+.+|+...+...... .+..+ .++.|+..+++..... ..+..++++++.+++
T Consensus 399 -~---~~v~~~d~~tg~~~~~~~~~~~-~v~~~----------~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 399 -R---FEIMTVDLETGKPTVIERSREA-MITDF----------TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp -T---SEEEEEETTTCCEEEEEECSSS-CCCCE----------EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred -C---CeEEEEECCCCceEEeccCCCC-Cccce----------EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 1 1366788888888777633211 11111 1345566777766543 456789999998887
Q ss_pred eeecccc
Q 012630 382 CRQITDF 388 (459)
Q Consensus 382 ~~~LT~~ 388 (459)
.++|+..
T Consensus 464 ~~~l~~~ 470 (1045)
T 1k32_A 464 IFAATTE 470 (1045)
T ss_dssp EEECSCS
T ss_pred EEEeeCC
Confidence 7777754
No 30
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.00 E-value=3.4e-08 Score=92.86 Aligned_cols=174 Identities=14% Similarity=0.042 Sum_probs=111.5
Q ss_pred hhcceEEEcC-CCceeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 73 TTTQLVLATL-DGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
...+||.+++ +++.+.+........++|||||++|+|+.... ....+|.++..++..+.+...
T Consensus 108 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~----------~~~~l~~~~~~~~~~~~~~~~------ 171 (297)
T 2ojh_A 108 GKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRD----------QVFDIYSMDIDSGVETRLTHG------ 171 (297)
T ss_dssp SSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEET----------TEEEEEEEETTTCCEEECCCS------
T ss_pred CcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCC----------CceEEEEEECCCCcceEcccC------
Confidence 3579999998 77888888766577899999999999886431 113566666777666655442
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLAL 231 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al 231 (459)
...+..+.|+|||+ .|++....++ ...||.++. .+++.+.+.........+.|++|+..|
T Consensus 172 -------~~~~~~~~~s~dg~-~l~~~~~~~~---------~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~s~dg~~l 231 (297)
T 2ojh_A 172 -------EGRNDGPDYSPDGR-WIYFNSSRTG---------QMQIWRVRV---DGSSVERITDSAYGDWFPHPSPSGDKV 231 (297)
T ss_dssp -------SSCEEEEEECTTSS-EEEEEECTTS---------SCEEEEEET---TSSCEEECCCCSEEEEEEEECTTSSEE
T ss_pred -------CCccccceECCCCC-EEEEEecCCC---------CccEEEECC---CCCCcEEEecCCcccCCeEECCCCCEE
Confidence 12456889999999 6776643222 347888876 555777776655566778999998655
Q ss_pred EEEeecCC-------ccEEEEEEcCCCCCCCceEEeecCCCCccCCCCC-CCeeeCCCCCEEEEEe
Q 012630 232 VQETWFKT-------TQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGL-PMMRKSSTGTRVIAKI 289 (459)
Q Consensus 232 ~~~~~~~~-------~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~-~~~~~~~dg~~v~~~~ 289 (459)
++...... ....||++++.+++ .+.+....... +. ....++++|+++++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~~~~~~~~~-----~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 232 VFVSYDADVFDHPRDLDVRVQLMDMDGGN--VETLFDLFGGQ-----GTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp EEEEEETTCCSCCSSEEEEEEEEETTSCS--CEEEEEEEEST-----TTSCSCCBCTTSSEEEEEE
T ss_pred EEEEcCCCCCcccccCceEEEEEecCCCC--ceeeeccCCCC-----cccccceECCCCCEEEEEE
Confidence 54432111 34679999987643 34443211000 11 1124688888775543
No 31
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.98 E-value=6.8e-08 Score=94.27 Aligned_cols=219 Identities=12% Similarity=0.186 Sum_probs=127.8
Q ss_pred CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEec
Q 012630 90 GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRA 169 (459)
Q Consensus 90 ~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~Wsp 169 (459)
..-..+.++++ ||++|+|+....... .......++++|+++++.++| . ....+.|||
T Consensus 12 ~~~~~~~~~~~--dG~~i~~~~~~~~~~----~~~~~~~l~~~d~~~~~~~~l-~----------------~~~~~~~Sp 68 (347)
T 2gop_A 12 AKFAYLSDPRT--KGELVAYVLTKANLK----DNKYENTIVIENLKNNARRFI-E----------------NATMPRISP 68 (347)
T ss_dssp CCSCEEEEEEE--ETTEEEEEEEEEETT----TTEEEEEEEEEETTTCCEEEE-E----------------SCEEEEECT
T ss_pred eeeEEcccceE--CCcEEEEEEeecCcc----cCCccceEEEEeCCCCceEEc-c----------------cCCCeEECC
Confidence 33444578888 999999996432100 112347899999998877766 1 234679999
Q ss_pred CCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEEEEeecC-----------
Q 012630 170 DRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQETWFK----------- 238 (459)
Q Consensus 170 Dg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~~~~~~~----------- 238 (459)
||+ .|+|+....+ .....||++++ ++++.+.++.... ...+.|+|||..|++.....
T Consensus 69 Dg~-~la~~~~~~~-------~~~~~l~~~~~---~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 69 DGK-KIAFMRANEE-------KKVSEIWVADL---ETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp TSS-EEEEEEEETT-------TTEEEEEEEET---TTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred CCC-EEEEEEeccC-------CCcceEEEEEC---CCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 999 8888754321 11346999988 6668888887655 78899999985555433110
Q ss_pred ------------CccEEEEEEcCCCCCCCc-eEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCC
Q 012630 239 ------------TTQTRTWLISPGSKDTAP-LILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRG 305 (459)
Q Consensus 239 ------------~~~~~ly~v~~~~~~~~~-~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g 305 (459)
....+||++++.+++ . +.+.. . . -....+++|| +++.... .+
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~--~~~~l~~-~--~------~~~~~~spdg--~~~~~~~------------~~ 191 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEE--VIEEFEK-P--R------FSSGIWHRDK--IVVNVPH------------RE 191 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTE--EEEEEEE-E--T------TCEEEEETTE--EEEEEEC------------CC
T ss_pred cceeecCcccccCccceEEEEECCCCe--EEeeecC-C--C------cccccCCCCe--EEEEEec------------cc
Confidence 124689999987542 3 44432 1 1 0112456776 3322110 00
Q ss_pred CCCC-CCcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCC----CCcceEEEECCCc
Q 012630 306 ATPE-GDVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKT----EITQYWIQSWPHK 380 (459)
Q Consensus 306 ~s~~-gd~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~----~P~ely~~~~~~g 380 (459)
.... .....|+.++ +++.+.+... . .+.. + +.|+..+++...... ....+|+++ ++
T Consensus 192 ~~~~~~~~~~l~~~d--~~~~~~l~~~-~--~~~~---~---------spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~ 252 (347)
T 2gop_A 192 IIPQYFKFWDIYIWE--DGKEEKMFEK-V--SFYA---V---------DSDGERILLYGKPEKKYMSEHNKLYIYD--GK 252 (347)
T ss_dssp SSCCSSCCEEEEEEE--TTEEEEEEEE-E--SEEE---E---------EECSSCEEEEECCSSSCCCSSCEEEEEC--SS
T ss_pred ccccccccccEEEeC--CCceEEeccC-c--ceee---E---------CCCCCEEEEEEccccCCccccceEEEEC--CC
Confidence 0000 1034577788 6766666543 2 1111 1 234566776654432 246799988 56
Q ss_pred ceeeccc
Q 012630 381 KCRQITD 387 (459)
Q Consensus 381 ~~~~LT~ 387 (459)
+.++|+.
T Consensus 253 ~~~~l~~ 259 (347)
T 2gop_A 253 EVMGILD 259 (347)
T ss_dssp CEEESST
T ss_pred ceEeccc
Confidence 7777765
No 32
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.93 E-value=6.2e-08 Score=106.08 Aligned_cols=222 Identities=9% Similarity=0.097 Sum_probs=123.5
Q ss_pred eeecccC-CCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeecccccccccccccccccceeeeEEecCCC
Q 012630 95 YTAVEPS-PDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPLVENIPIAYNSVREGMRLISWRADRP 172 (459)
Q Consensus 95 ~~~~~~S-PDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~ 172 (459)
...++|| |||++|||+..+.- .-..+|+++|++++ +. +.. ..+ . ...++.|||||+
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G--------~~~~~l~v~dl~~g~~~--l~~-----~~~----~---~~~~~~WspDg~ 233 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSG--------NEVYTIEFKRISDPSQT--IAD-----KVS----G---TNGEIVWGPDHT 233 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSS--------SSCEEEEEEETTCTTCC--CCC-----CEE----E---ECSCCEECSSTT
T ss_pred EeeeEecCCCCCEEEEEEeCCC--------CceEEEEEEECCCCCEe--CCc-----ccc----C---ceeeEEEecCCC
Confidence 4689999 99999999975421 11245899999877 52 111 000 1 123679999999
Q ss_pred ceEEEEEeccCCccccccCCCCeEEeccCCCCCCCC--ceEeccc--cceeccceeCCCCcEEEEEeecCCccEEEEEEc
Q 012630 173 STLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE--PEILHKL--DLRFRGVSWCDDSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 173 ~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~--~~~L~~~--~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~ 248 (459)
.|+|+.....+ ...+||.+++ .++. .+.++.. .....++.||+||..|++..+ .....++|+++
T Consensus 234 -~l~y~~~d~~~-------~~~~v~~~~l---gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~-~~~~~~l~~~d 301 (751)
T 2xe4_A 234 -SLFYVTKDETL-------RENKVWRHVM---GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQ-SPETAEVHLLD 301 (751)
T ss_dssp -EEEEEEECTTC-------CEEEEEEEET---TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEE-CSSCEEEEEEE
T ss_pred -EEEEEEECCCC-------CCCEEEEEEC---CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEec-CCCCceEEEEE
Confidence 88888643221 1247898887 4433 2344432 223456899999866665554 34567899999
Q ss_pred CCCCCCCc--eEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCC-Cce
Q 012630 249 PGSKDTAP--LILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINT-GSK 325 (459)
Q Consensus 249 ~~~~~~~~--~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~t-g~~ 325 (459)
++++..+. ++++.+.. .+.+ +++ .. .++.+|+.++.. ++....|+++++++ ++.
T Consensus 302 ~~~~~~~~~~~~l~~~~~--------~~~~--s~~------~~-----~g~~l~~~t~~~--~a~~~~L~~~d~~~~~~~ 358 (751)
T 2xe4_A 302 LRKGNAHNTLEIVRPREK--------GVRY--DVQ------MH-----GTSHLVILTNEG--GAVNHKLLIAPRGQPSDW 358 (751)
T ss_dssp SSSCTTCCCEEESSCCCT--------TCCE--EEE------EE-----TTTEEEEEECTT--TCTTCEEEEEETTSTTCC
T ss_pred CCCCCCCceeEEeecCCC--------CceE--EEe------ee-----eCCEEEEEeCCC--CCCCcEEEEEcCCCcccc
Confidence 87654445 55543321 1111 111 00 133566655211 13456789999876 344
Q ss_pred EE-EeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEEC-------CCcc-eeecc
Q 012630 326 ER-IWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSW-------PHKK-CRQIT 386 (459)
Q Consensus 326 ~~-l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~-------~~g~-~~~LT 386 (459)
+. +........++.+ +..++.+++... ..-...++++++ .+++ .++|+
T Consensus 359 ~~~li~~~~~~~l~~~------------~~~~~~lv~~~~-~~g~~~l~~~dl~~~~~~~~~g~~~~~l~ 415 (751)
T 2xe4_A 359 SHVLVDHSEDVFMESI------------AVRSNYLVVAGR-RAGLTRIWTMMADSQDGVFKAGTGLREVV 415 (751)
T ss_dssp CCEEECCCSSEEEEEE------------EECSSEEEEEEE-ETTEEEEEEEECCTTTSCCCTTTCCEECC
T ss_pred eeeEECCCCCcEEEEE------------EEECCEEEEEEE-eCCEEEEEEEecccccccccCCccceEEC
Confidence 44 4433321012221 122356655543 334567888885 4555 56654
No 33
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.92 E-value=6e-08 Score=104.97 Aligned_cols=162 Identities=9% Similarity=0.074 Sum_probs=99.4
Q ss_pred ecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccc-cccccccccccccceeeeEEecCCCceE
Q 012630 97 AVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPL-VENIPIAYNSVREGMRLISWRADRPSTL 175 (459)
Q Consensus 97 ~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~-~~~~P~~~~~~~~~~r~~~WspDg~~~l 175 (459)
...++|||++|+|++...... ...+|+.+..|+..+.|++... .+. -......+.|||||+ .|
T Consensus 72 ~~~p~~dG~~~~~~~~~~~~~--------~~~l~~~~~~~~~~~~l~d~~~~a~~-------~~~~~~~~~~SPDG~-~l 135 (695)
T 2bkl_A 72 VSTPSRRNGRFFYVRTHKDKE--------KAILYWRQGESGQEKVLLDPNGWSKD-------GTVSLGTWAVSWDGK-KV 135 (695)
T ss_dssp ECCCEEETTEEEEEEECTTCS--------SCEEEEEESTTSCCEEEECGGGSSSS-------SCEEEEEEEECTTSS-EE
T ss_pred CCCCEEECCEEEEEEEcCCCe--------EEEEEEEcCCCCCcEEEEchHHhccC-------CCEEEEEEEECCCCC-EE
Confidence 345669999999998643211 2457888877777777776421 111 012456889999999 88
Q ss_pred EEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc-cceeccceeCCCCcEEEEEeecCC---------ccEEEE
Q 012630 176 YWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL-DLRFRGVSWCDDSLALVQETWFKT---------TQTRTW 245 (459)
Q Consensus 176 ~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~-~~~~~~~~Ws~D~~al~~~~~~~~---------~~~~ly 245 (459)
+|+....+.+ ...|+++++ ++|+....... ...+..+.|++||..|++...... +..+||
T Consensus 136 a~~~~~~G~~-------~~~i~v~dl---~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~ 205 (695)
T 2bkl_A 136 AFAQKPNAAD-------EAVLHVIDV---DSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIR 205 (695)
T ss_dssp EEEEEETTCS-------CCEEEEEET---TTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEE
T ss_pred EEEECCCCCc-------eEEEEEEEC---CCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEE
Confidence 8886543322 357999998 66565411111 112367999999977777653222 366799
Q ss_pred EEcCCCCCCCceEEeecCCCCccCCCCCC-CeeeCCCCCEEEEEe
Q 012630 246 LISPGSKDTAPLILFDRSSEDVYSDPGLP-MMRKSSTGTRVIAKI 289 (459)
Q Consensus 246 ~v~~~~~~~~~~~l~d~~~~d~y~~pg~~-~~~~~~dg~~v~~~~ 289 (459)
+.++.++..+.++++...... ... ...+++||+++++..
T Consensus 206 ~~~l~t~~~~~~lv~~~~~~~-----~~~~~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 206 YHTLGTEPSKDTVVHERTGDP-----TTFLQSDLSRDGKYLFVYI 245 (695)
T ss_dssp EEETTSCGGGCEEEECCCCCT-----TCEEEEEECTTSCCEEEEE
T ss_pred EEECCCCchhceEEEecCCCC-----EEEEEEEECCCCCEEEEEE
Confidence 999876543345654322111 100 124689998776554
No 34
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.92 E-value=1.1e-07 Score=103.07 Aligned_cols=228 Identities=10% Similarity=0.077 Sum_probs=126.7
Q ss_pred cCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecc-cccccccccccccccceeeeEEecCCCceEEEE
Q 012630 100 PSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCEL-PLVENIPIAYNSVREGMRLISWRADRPSTLYWV 178 (459)
Q Consensus 100 ~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~-p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~ 178 (459)
.+|||++++|+...... ....+|+.+..++..+.|.+. .+.+. .......+.|||||+ .|+|.
T Consensus 79 p~~dG~~~~~~~~~~~~--------~~~~l~~~~~~~~~~~~lld~~~l~~~-------~~~~~~~~~~SPDg~-~la~~ 142 (710)
T 2xdw_A 79 HFKKGKRYFYFYNTGLQ--------NQRVLYVQDSLEGEARVFLDPNILSDD-------GTVALRGYAFSEDGE-YFAYG 142 (710)
T ss_dssp CEEETTEEEEEEECSSC--------SSCEEEEESSTTSCCEEEECGGGGCTT-------SCEEEEEEEECTTSS-EEEEE
T ss_pred CEEECCEEEEEEEcCCc--------eEEEEEEEcCCCCCcEEEECHHHhccC-------CCEEEEEEEECCCCC-EEEEE
Confidence 35999999999754211 124678888766665555442 11111 011356889999999 88888
Q ss_pred EeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEEEEeecCC------------ccEEEEE
Q 012630 179 ETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQETWFKT------------TQTRTWL 246 (459)
Q Consensus 179 ~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~------------~~~~ly~ 246 (459)
....+.+ ...|+++++ .+|+...++.....+..+.|+|||..|++...... +..+||+
T Consensus 143 ~~~~G~~-------~~~i~v~d~---~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~ 212 (710)
T 2xdw_A 143 LSASGSD-------WVTIKFMKV---DGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYY 212 (710)
T ss_dssp EEETTCS-------CEEEEEEET---TTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEE
T ss_pred EcCCCCc-------eEEEEEEEC---CCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEE
Confidence 6543221 237999998 66677665433334677999999877776553211 2456898
Q ss_pred EcCCCCCCCceEEeecCCCCccCCCCCC-CeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECCC---
Q 012630 247 ISPGSKDTAPLILFDRSSEDVYSDPGLP-MMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNINT--- 322 (459)
Q Consensus 247 v~~~~~~~~~~~l~d~~~~d~y~~pg~~-~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~t--- 322 (459)
.++.++....++++.... +++.. ...+++||++|++.... +. + ....|+.+|+.+
T Consensus 213 ~~l~t~~~~~~~v~~~~~-----~~~~~~~~~~SpDg~~l~~~~~~-------------~~--~-~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 213 HVLGTDQSEDILCAEFPD-----EPKWMGGAELSDDGRYVLLSIRE-------------GC--D-PVNRLWYCDLQQESN 271 (710)
T ss_dssp EETTSCGGGCEEEECCTT-----CTTCEEEEEECTTSCEEEEEEEC-------------SS--S-SCCEEEEEEGGGSSS
T ss_pred EECCCCcccceEEeccCC-----CCeEEEEEEEcCCCCEEEEEEEc-------------cC--C-CccEEEEEECccccc
Confidence 888765433345443211 11111 13568999887654321 00 0 012455666654
Q ss_pred ---C--ceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcc---eeeccc
Q 012630 323 ---G--SKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKK---CRQITD 387 (459)
Q Consensus 323 ---g--~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~---~~~LT~ 387 (459)
+ ..+.|...... . ... ++.+++.+++.......-..|+++++.+++ .+.|+.
T Consensus 272 ~~~~~~~~~~l~~~~~~-~-~~~-----------~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEG-E-YDY-----------VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp SSCSSCCCEEEECSSSS-C-EEE-----------EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred ccCCccceEEeeCCCCc-E-EEE-----------EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccC
Confidence 3 34444433211 1 111 223456777765443334568888876653 244543
No 35
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.90 E-value=1.4e-07 Score=102.81 Aligned_cols=230 Identities=13% Similarity=0.130 Sum_probs=128.6
Q ss_pred ecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC---Cceeeeeeccc-ccccccccccccccceeeeEEecCCC
Q 012630 97 AVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD---GKFVRQLCELP-LVENIPIAYNSVREGMRLISWRADRP 172 (459)
Q Consensus 97 ~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~---g~~~~~lt~~p-~~~~~P~~~~~~~~~~r~~~WspDg~ 172 (459)
...++|||++|+|++...... ...+|+.+.. |+..+.|.+.. +.+. . ......+.|||||+
T Consensus 111 ~~~p~pdG~~~~~~~~~~~~~--------~~~l~~~~~~~~~~~~~~~lld~~~l~~~------~-~~~~~~~~~SPDG~ 175 (741)
T 1yr2_A 111 FGLPQRRGASVFYSWNSGLMN--------QSQLLVRPADAPVGTKGRVLLDPNTWAKD------G-ATALDAWAASDDGR 175 (741)
T ss_dssp ECCCEEETTEEEEEEECSSCS--------SCEEEEEETTSCTTCCCEEEECGGGCC-----------EEEEEEEECTTSS
T ss_pred cCCCEEECCEEEEEEEcCCCe--------EEEEEEEcCCccCCCCCEEEECHHHhccC------C-CEEEEeEEECCCCC
Confidence 344569999999998643211 2567888876 66666665431 1111 0 12456889999999
Q ss_pred ceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEEEEeecCC----------ccE
Q 012630 173 STLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQETWFKT----------TQT 242 (459)
Q Consensus 173 ~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~----------~~~ 242 (459)
.|+|.....+.+ ...|+++++ ++|+..........+..+.|++| ..|++...... ...
T Consensus 176 -~la~~~~~~G~e-------~~~i~v~dl---~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 176 -LLAYSVQDGGSD-------WRTVKFVGV---ADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp -EEEEEEEETTCS-------EEEEEEEET---TTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCC
T ss_pred -EEEEEEcCCCCc-------eEEEEEEEC---CCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCC
Confidence 888886432221 247999998 76676554322223468999999 77776553222 145
Q ss_pred EEEEEcCCCCCCCceEEeecCCCCccCCCCCC-CeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEEEECC
Q 012630 243 RTWLISPGSKDTAPLILFDRSSEDVYSDPGLP-MMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDLFNIN 321 (459)
Q Consensus 243 ~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~-~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~~~l~ 321 (459)
+||+.++.++....++++..... +... ...+++||++|++.... +. + ....|+.+|++
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~-----~~~~~~~~~SpDG~~l~~~~~~-------------~~--~-~~~~l~~~d~~ 302 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPEL-----PKRGHGASVSSDGRWVVITSSE-------------GT--D-PVNTVHVARVT 302 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTC-----TTCEEEEEECTTSCEEEEEEEC-------------TT--C-SCCEEEEEEEE
T ss_pred EEEEEECCCCchhCEEEeccCCC-----CeEEEEEEECCCCCEEEEEEEc-------------cC--C-CcceEEEEECC
Confidence 78888886654333555432211 1101 12468999877654321 00 0 12346667776
Q ss_pred CC--c-eEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCc--ceeeccc
Q 012630 322 TG--S-KERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHK--KCRQITD 387 (459)
Q Consensus 322 tg--~-~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g--~~~~LT~ 387 (459)
++ + .+.|...... .... ++.+++.+++.......-..|+++++.++ +.+.|+.
T Consensus 303 ~~~~~~~~~l~~~~~~--~~~~-----------~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 303 NGKIGPVTALIPDLKA--QWDF-----------VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp TTEECCCEEEECSSSS--CEEE-----------EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC
T ss_pred CCCCcccEEecCCCCc--eEEE-----------EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec
Confidence 66 4 5555433211 1111 11234677766544333466888887663 4555553
No 36
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.80 E-value=1.4e-07 Score=99.40 Aligned_cols=182 Identities=10% Similarity=-0.004 Sum_probs=109.2
Q ss_pred cceEEEcCCCceeecCCCc--eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEec--CCceeeeeeccccccc
Q 012630 75 TQLVLATLDGTVKEFGPPA--IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTA--DGKFVRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~~G~~~~l~~~~--~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~--~g~~~~~lt~~p~~~~ 150 (459)
.+||.++ +|+.++++... .+..+.|||| +|+|++....- .-..++|+++. +|+.. +++..
T Consensus 46 ~~lw~~~-~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g-------~~~~~l~~~~~~~~g~~~-~l~~~----- 109 (582)
T 3o4h_A 46 VNAYLYD-GGETVKLNREPINSVLDPHYGVG--RVILVRDVSKG-------AEQHALFKVNTSRPGEEQ-RLEAV----- 109 (582)
T ss_dssp EEEEEEE-TTEEEECCSSCCSEECEECTTCS--EEEEEEECSTT-------SCCEEEEEEETTSTTCCE-ECTTS-----
T ss_pred eeEEEEc-CCCcEeeecccccccccccCCCC--eEEEEeccCCC-------CcceEEEEEeccCCCccc-cccCC-----
Confidence 4677765 88889988743 5679999999 67787643100 01235777887 66554 44432
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcE
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLA 230 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~a 230 (459)
.+.+.+.|+|||+ .++++...+.+ ..|| +. .+++.+.|+.... ..+.|||||..
T Consensus 110 ---------~~~~~~~~s~dg~-~~~~~s~~~~~---------~~l~--d~---~~g~~~~l~~~~~--~~~~~spDG~~ 163 (582)
T 3o4h_A 110 ---------KPMRILSGVDTGE-AVVFTGATEDR---------VALY--AL---DGGGLRELARLPG--FGFVSDIRGDL 163 (582)
T ss_dssp ---------CSBEEEEEEECSS-CEEEEEECSSC---------EEEE--EE---ETTEEEEEEEESS--CEEEEEEETTE
T ss_pred ---------CCceeeeeCCCCC-eEEEEecCCCC---------ceEE--Ec---cCCcEEEeecCCC--ceEEECCCCCE
Confidence 1334679999999 56655432111 1244 44 4457788875443 66889999977
Q ss_pred EEEEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCC
Q 012630 231 LVQETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEG 310 (459)
Q Consensus 231 l~~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~g 310 (459)
|++..........||++++++++ .+.|++..... ....++|||+.++... .++
T Consensus 164 la~~~~~~~~~~~i~~~d~~~g~--~~~l~~~~~~~-------~~~~~SpDG~~l~~~~------------------~~~ 216 (582)
T 3o4h_A 164 IAGLGFFGGGRVSLFTSNLSSGG--LRVFDSGEGSF-------SSASISPGMKVTAGLE------------------TAR 216 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTTCC--CEEECCSSCEE-------EEEEECTTSCEEEEEE------------------CSS
T ss_pred EEEEEEcCCCCeEEEEEcCCCCC--ceEeecCCCcc-------ccceECCCCCEEEEcc------------------CCC
Confidence 77544322333569999987654 35554322110 1135689988765211 011
Q ss_pred CcceEEEEECCCCceE
Q 012630 311 DVPFLDLFNINTGSKE 326 (459)
Q Consensus 311 d~~~l~~~~l~tg~~~ 326 (459)
...|+++|+++++.+
T Consensus 217 -~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 217 -EARLVTVDPRDGSVE 231 (582)
T ss_dssp -CEEEEEECTTTCCEE
T ss_pred -eeEEEEEcCCCCcEE
Confidence 135777888887776
No 37
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.76 E-value=3.1e-07 Score=99.50 Aligned_cols=156 Identities=10% Similarity=-0.026 Sum_probs=91.2
Q ss_pred cceEEEcC-CCceeecCCCce-eeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce--eeeeeccccccc
Q 012630 75 TQLVLATL-DGTVKEFGPPAI-YTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF--VRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~~~~-~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~--~~~lt~~p~~~~ 150 (459)
.+|+++|+ +|+..+.+-+.. ..+++|| ||+.|+|++...+-.-.......+.+++++++.... ...|...+..
T Consensus 155 ~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~-- 231 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPA-- 231 (693)
T ss_dssp EEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGG--
T ss_pred EEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCC--
Confidence 47899999 888776654444 5789999 999999998553200000011235789999876432 2344443210
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCC--CceEeccccceeccceeCCCC
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE--EPEILHKLDLRFRGVSWCDDS 228 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~--~~~~L~~~~~~~~~~~Ws~D~ 228 (459)
......++.|||||+ .|++...... ...+||.+++ +++ +.+.|+........ .|+++|
T Consensus 232 -------~~~~~~~~~~SpDg~-~l~~~~~~~~--------~~~~i~~~d~---~~~~~~~~~l~~~~~~~~~-~~~~~g 291 (693)
T 3iuj_A 232 -------QHHRYVGATVTEDDR-FLLISAANST--------SGNRLYVKDL---SQENAPLLTVQGDLDADVS-LVDNKG 291 (693)
T ss_dssp -------GCCSEEEEEECTTSC-EEEEEEESSS--------SCCEEEEEET---TSTTCCCEEEECSSSSCEE-EEEEET
T ss_pred -------CCeEEEEEEEcCCCC-EEEEEEccCC--------CCcEEEEEEC---CCCCCceEEEeCCCCceEE-EEeccC
Confidence 011234679999999 6766643221 1358999987 443 56666643222112 266665
Q ss_pred cEEEEEeecCCccEEEEEEcCCCCC
Q 012630 229 LALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
..|++..+.+..+.+|+.+++++++
T Consensus 292 ~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 292 STLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp TEEEEEECTTCTTCEEEEEETTSCC
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCC
Confidence 3444333334456889999987653
No 38
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.65 E-value=1.7e-05 Score=76.10 Aligned_cols=150 Identities=11% Similarity=-0.022 Sum_probs=86.9
Q ss_pred hhcceEEEcC-CCceee-cCCCc---eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccc
Q 012630 73 TTTQLVLATL-DGTVKE-FGPPA---IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELP 146 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~-l~~~~---~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p 146 (459)
..++|+++|+ +|+... +..+. ....++|||||++|+++.. ....+++||+.+++ +..+....
T Consensus 9 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~------------~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN------------KSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET------------TTTEEEEEETTTCCEEEEEECCB
T ss_pred CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC------------CCCeEEEEECCCCCeEeeEEcCC
Confidence 3467899998 776553 43333 3578999999999877752 23578999986544 34343211
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCC
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCD 226 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~ 226 (459)
.. .....+..+.|+|||+ .|+......+..+.........|++++. .+++.............+.|++
T Consensus 77 -~~-------~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~---~~~~~~~~~~~~~~~~~~~~s~ 144 (337)
T 1pby_B 77 -PE-------ERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDA---ETLSRRKAFEAPRQITMLAWAR 144 (337)
T ss_dssp -TT-------EEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEET---TTTEEEEEEECCSSCCCEEECT
T ss_pred -cc-------cccccccceEECCCCC-EEEEEecccccccccccccCceEEEEEC---CCCcEEEEEeCCCCcceeEECC
Confidence 00 0112455789999998 6766542211000000001357888887 5434444433444456789999
Q ss_pred CCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 227 DSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 227 D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
|+..|+... ..+++++++++
T Consensus 145 dg~~l~~~~------~~i~~~d~~~~ 164 (337)
T 1pby_B 145 DGSKLYGLG------RDLHVMDPEAG 164 (337)
T ss_dssp TSSCEEEES------SSEEEEETTTT
T ss_pred CCCEEEEeC------CeEEEEECCCC
Confidence 975444332 13788887654
No 39
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.65 E-value=1.1e-06 Score=85.57 Aligned_cols=226 Identities=12% Similarity=0.139 Sum_probs=138.8
Q ss_pred hcceEEEcCCC-ceeecCCCceeeecccCCCCCeEEEEEeccCcccccc-cCCCCcceEEEecCCceeeeeecccccccc
Q 012630 74 TTQLVLATLDG-TVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVS-YTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 74 ~sqL~~v~~~G-~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~-~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
.++||+++.+| +.++|+... .--++|||++|.|+..+..-+...- +.--...|+.++++|++...|+..+
T Consensus 36 ~~~ly~~~~dg~~~~~l~~~~---~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~----- 107 (302)
T 3s25_A 36 NGRLYAMNIDGSNIHKLSNDT---AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP----- 107 (302)
T ss_dssp TTEEEEEETTSCSCEEEEEEE---EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC-----
T ss_pred CceEEEEcCCCCCCEEccCCc---eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC-----
Confidence 37899999944 778887643 2345899999999975431111100 0001367899999999888787642
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLAL 231 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al 231 (459)
...|++++. .|+|+.....+ ...||.++. +|++.+.|+.... +.+++++..|
T Consensus 108 ------------~~~~s~~g~-~Iy~~~~~~~~--------~~~Iy~~~~---dGs~~~~lt~~~~----~~~~~~g~~i 159 (302)
T 3s25_A 108 ------------CIYASLIGN-YIYYLHYDTQT--------ATSLYRIRI---DGEEKKKIKNHYL----FTCNTSDRYF 159 (302)
T ss_dssp ------------EEEEEEETT-EEEEEEESSSS--------CEEEEEEET---TSCCCEEEESSCC----CCSEEETTEE
T ss_pred ------------ccEEEEeCC-EEEEEeecCCC--------CceEEEEEC---CCCCeEEEeCCCc----eEeeEECCEE
Confidence 237999999 89998521111 347999999 8878888876432 4456666566
Q ss_pred EEEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCC
Q 012630 232 VQETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGD 311 (459)
Q Consensus 232 ~~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd 311 (459)
++... ....||+++++++. .+.|++... + .+ ..|+ ++.||++.. ++
T Consensus 160 y~t~~---g~~~Iy~~~l~g~~--~~~l~~~~~---~----~~---~~P~--------------g~~iy~t~~-----~~ 205 (302)
T 3s25_A 160 YYNNP---KNGQLYRYDTASQS--EALFYDCNC---Y----KP---VVLD--------------DTNVYYMDV-----NR 205 (302)
T ss_dssp EEECT---TTCCEEEEETTTTE--EEEEECSCE---E----EE---EEEE--------------TTEEEEEEG-----GG
T ss_pred EEEeC---CCceEEEEECCCCC--EEEEeCCCc---c----ce---eeec--------------CCEEEEEEc-----CC
Confidence 65542 34569999987543 355542110 0 00 1133 446676642 12
Q ss_pred cceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcceeeccc
Q 012630 312 VPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKCRQITD 387 (459)
Q Consensus 312 ~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~~~LT~ 387 (459)
.+.|++++++++..+.|.... ... ++++++.|.+...... ..|+..++.+...++|+.
T Consensus 206 ~~~I~~~~ldG~~~~~Lt~~~----~~~------------~~~~g~~Iy~~~~~~~--~~i~~~~~DG~~r~~l~~ 263 (302)
T 3s25_A 206 DNAIVHVNINNPNPVVLTEAN----IEH------------YNVYGSLIFYQRGGDN--PALCVVKNDGTGFKELAK 263 (302)
T ss_dssp TTEEEEECSSSCCCEECSCSC----EEE------------EEEETTEEEEEECSSS--CEEEEEETTSCCCEEEEE
T ss_pred CcEEEEEECCCCCeEEEeCCC----cce------------EEECCCEEEEEECCCC--cEEEEEECCCCccEEeeC
Confidence 267999999988877775432 111 2223467766543322 789999986656677765
No 40
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.65 E-value=8.3e-06 Score=78.58 Aligned_cols=135 Identities=8% Similarity=-0.022 Sum_probs=82.8
Q ss_pred hcceEEEcC-CCceeec-CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee--eeeecccccc
Q 012630 74 TTQLVLATL-DGTVKEF-GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV--RQLCELPLVE 149 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l-~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~--~~lt~~p~~~ 149 (459)
...|.++|+ +|+.... ..+.....+.|||||++|++... ....+++||++++.. +.+..
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------------~~~~i~~~d~~~~~~~~~~~~~----- 81 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLGYDFVDTAITSDCSNVVVTSD------------FCQTLVQIETQLEPPKVVAIQE----- 81 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECCCCEEEEEECSSSCEEEEEES------------TTCEEEEEECSSSSCEEEEEEE-----
T ss_pred CCeEEEEeCcccceeeeEEccCCcceEEEcCCCCEEEEEeC------------CCCeEEEEECCCCceeEEeccc-----
Confidence 457888898 7766533 22222228999999999887753 135789999876553 33322
Q ss_pred cccccccccccceee-eEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCC
Q 012630 150 NIPIAYNSVREGMRL-ISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDS 228 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~-~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~ 228 (459)
..++.. +.|+|||+ .|+ +... .+ ....|++++. ..++.............+.|+|||
T Consensus 82 ---------~~~~~~~~~~s~dg~-~l~-~~~~-~~-------~~~~i~v~d~---~~~~~~~~~~~~~~~~~~~~spdg 139 (331)
T 3u4y_A 82 ---------GQSSMADVDITPDDQ-FAV-TVTG-LN-------HPFNMQSYSF---LKNKFISTIPIPYDAVGIAISPNG 139 (331)
T ss_dssp ---------CSSCCCCEEECTTSS-EEE-ECCC-SS-------SSCEEEEEET---TTTEEEEEEECCTTEEEEEECTTS
T ss_pred ---------CCCCccceEECCCCC-EEE-EecC-CC-------CcccEEEEEC---CCCCeEEEEECCCCccceEECCCC
Confidence 123445 89999999 666 3221 11 0126888887 444554444444445678999998
Q ss_pred c-EEEEEeecCCcc-EEEEEEcC
Q 012630 229 L-ALVQETWFKTTQ-TRTWLISP 249 (459)
Q Consensus 229 ~-al~~~~~~~~~~-~~ly~v~~ 249 (459)
. +++... .... ..+|.++.
T Consensus 140 ~~l~~~~~--~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 140 NGLILIDR--SSANTVRRFKIDA 160 (331)
T ss_dssp SCEEEEEE--TTTTEEEEEEECT
T ss_pred CEEEEEec--CCCceEEEEEECC
Confidence 5 444433 2344 67787774
No 41
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.63 E-value=1.8e-05 Score=78.16 Aligned_cols=136 Identities=11% Similarity=0.100 Sum_probs=86.2
Q ss_pred hcceEEEcC-CCceee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 74 TTQLVLATL-DGTVKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
.+.|.++++ +|+... +..+.....+.|||||++|++... ....+++||+.+++.......
T Consensus 53 d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~------------~~~~v~v~d~~~~~~~~~~~~------ 114 (391)
T 1l0q_A 53 SNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM------------ASSTLSVIDTTSNTVAGTVKT------ 114 (391)
T ss_dssp GTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET------------TTTEEEEEETTTTEEEEEEEC------
T ss_pred CCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEEC------------CCCEEEEEECCCCeEEEEEeC------
Confidence 367888998 776553 444456679999999999988752 136789999886655433321
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLAL 231 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al 231 (459)
...+..+.|+|||+ .|+++... ...|++++. ..++.............+.|++|+..+
T Consensus 115 -------~~~~~~~~~s~dg~-~l~~~~~~-----------~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~dg~~l 172 (391)
T 1l0q_A 115 -------GKSPLGLALSPDGK-KLYVTNNG-----------DKTVSVINT---VTKAVINTVSVGRSPKGIAVTPDGTKV 172 (391)
T ss_dssp -------SSSEEEEEECTTSS-EEEEEETT-----------TTEEEEEET---TTTEEEEEEECCSSEEEEEECTTSSEE
T ss_pred -------CCCcceEEECCCCC-EEEEEeCC-----------CCEEEEEEC---CCCcEEEEEecCCCcceEEECCCCCEE
Confidence 12457899999998 66555321 236888877 433444444333445678999998554
Q ss_pred EEEeecCCccEEEEEEcCCCC
Q 012630 232 VQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 232 ~~~~~~~~~~~~ly~v~~~~~ 252 (459)
+.... .+ ..++++++.++
T Consensus 173 ~~~~~-~~--~~v~~~d~~~~ 190 (391)
T 1l0q_A 173 YVANF-DS--MSISVIDTVTN 190 (391)
T ss_dssp EEEET-TT--TEEEEEETTTT
T ss_pred EEEeC-CC--CEEEEEECCCC
Confidence 33221 12 24777777653
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.62 E-value=1.6e-05 Score=78.52 Aligned_cols=136 Identities=10% Similarity=0.053 Sum_probs=86.7
Q ss_pred hcceEEEcC-CCceee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 74 TTQLVLATL-DGTVKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
.+.|.++++ +|+... +........++|||||++|+++... ...+.+||+..++.......
T Consensus 11 d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------d~~i~v~d~~~~~~~~~~~~------ 72 (391)
T 1l0q_A 11 SDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAH------------SNDVSIIDTATNNVIATVPA------ 72 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGG------------GTEEEEEETTTTEEEEEEEC------
T ss_pred CCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCC------------CCeEEEEECCCCeEEEEEEC------
Confidence 357888888 776553 3344446799999999999777521 36789999875544332221
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLAL 231 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al 231 (459)
...+..+.|+|||+ .|+..... ...|++++. ..++.............+.|++|+..|
T Consensus 73 -------~~~v~~~~~spdg~-~l~~~~~~-----------~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 73 -------GSSPQGVAVSPDGK-QVYVTNMA-----------SSTLSVIDT---TSNTVAGTVKTGKSPLGLALSPDGKKL 130 (391)
T ss_dssp -------SSSEEEEEECTTSS-EEEEEETT-----------TTEEEEEET---TTTEEEEEEECSSSEEEEEECTTSSEE
T ss_pred -------CCCccceEECCCCC-EEEEEECC-----------CCEEEEEEC---CCCeEEEEEeCCCCcceEEECCCCCEE
Confidence 12567899999999 66655321 236888887 544555444444456778999998655
Q ss_pred EEEeecCCccEEEEEEcCCCC
Q 012630 232 VQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 232 ~~~~~~~~~~~~ly~v~~~~~ 252 (459)
+.... .. ..++++++.++
T Consensus 131 ~~~~~-~~--~~v~~~d~~~~ 148 (391)
T 1l0q_A 131 YVTNN-GD--KTVSVINTVTK 148 (391)
T ss_dssp EEEET-TT--TEEEEEETTTT
T ss_pred EEEeC-CC--CEEEEEECCCC
Confidence 33331 12 25777777654
No 43
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.62 E-value=2.4e-06 Score=83.01 Aligned_cols=214 Identities=11% Similarity=0.135 Sum_probs=133.0
Q ss_pred HhhcceEEEcC-CCceeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 72 YTTTQLVLATL-DGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 72 ~~~sqL~~v~~-~G~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
.....|+++++ +++.++|+.... ..|||+|++|+|+...+ .....|+.++++|...++|+....
T Consensus 85 ~n~~~Iy~i~~dg~~~~~l~~~~~---~~~s~~g~~Iy~~~~~~---------~~~~~Iy~~~~dGs~~~~lt~~~~--- 149 (302)
T 3s25_A 85 YDRNSLCRIKRNGHGSTVLDPDPC---IYASLIGNYIYYLHYDT---------QTATSLYRIRIDGEEKKKIKNHYL--- 149 (302)
T ss_dssp CCSEEEEEEETTSCCCEEEECSCE---EEEEEETTEEEEEEESS---------SSCEEEEEEETTSCCCEEEESSCC---
T ss_pred cCCCeEEEEeCCCCcceEeecCCc---cEEEEeCCEEEEEeecC---------CCCceEEEEECCCCCeEEEeCCCc---
Confidence 34678999999 556667776432 37899999999985110 124678999999988888887532
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcE
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLA 230 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~a 230 (459)
..|+++|+ .|+|+.. + +..||++++ +|+..+.|.... .. .+ +.|++..
T Consensus 150 --------------~~~~~~g~-~iy~t~~---g--------~~~Iy~~~l---~g~~~~~l~~~~-~~-~~-~~P~g~~ 197 (302)
T 3s25_A 150 --------------FTCNTSDR-YFYYNNP---K--------NGQLYRYDT---ASQSEALFYDCN-CY-KP-VVLDDTN 197 (302)
T ss_dssp --------------CCSEEETT-EEEEECT---T--------TCCEEEEET---TTTEEEEEECSC-EE-EE-EEEETTE
T ss_pred --------------eEeeEECC-EEEEEeC---C--------CceEEEEEC---CCCCEEEEeCCC-cc-ce-eeecCCE
Confidence 24577888 8999842 2 347999998 886777775432 22 23 4487666
Q ss_pred EEEEeecCCccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCC
Q 012630 231 LVQETWFKTTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEG 310 (459)
Q Consensus 231 l~~~~~~~~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~g 310 (459)
|++..|. ...+|+++++++.+ .++|++.. +.+.+++ ++.||+.. ++
T Consensus 198 iy~t~~~--~~~~I~~~~ldG~~--~~~Lt~~~-----------~~~~~~~--------------g~~Iy~~~-----~~ 243 (302)
T 3s25_A 198 VYYMDVN--RDNAIVHVNINNPN--PVVLTEAN-----------IEHYNVY--------------GSLIFYQR-----GG 243 (302)
T ss_dssp EEEEEGG--GTTEEEEECSSSCC--CEECSCSC-----------EEEEEEE--------------TTEEEEEE-----CS
T ss_pred EEEEEcC--CCcEEEEEECCCCC--eEEEeCCC-----------cceEEEC--------------CCEEEEEE-----CC
Confidence 6665542 23789999998643 35553211 1122333 44677753 22
Q ss_pred CcceEEEEECCCCceEEEeecCcccceEEEEEeecCCCccccccCCCEEEEEeecCCCCcceEEEECCCcceeec
Q 012630 311 DVPFLDLFNINTGSKERIWESDKEKYYETAVALNLDQSVGDVNLNQLKILTSKESKTEITQYWIQSWPHKKCRQI 385 (459)
Q Consensus 311 d~~~l~~~~l~tg~~~~l~~~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~s~~~P~ely~~~~~~g~~~~L 385 (459)
....|+++++++...++|...+ ...+ ++.++.|.++.... ..+|...+.+...++|
T Consensus 244 ~~~~i~~~~~DG~~r~~l~~~~----~~~i------------~i~~d~Iy~td~~~---~~i~~~~~dGs~~~~l 299 (302)
T 3s25_A 244 DNPALCVVKNDGTGFKELAKGE----FCNI------------NVTSQYVYFTDFVS---NKEYCTSTQNPDTIKA 299 (302)
T ss_dssp SSCEEEEEETTSCCCEEEEESC----EEEE------------EECSSEEEEEETTT---CCEEEEESSSCCSCEE
T ss_pred CCcEEEEEECCCCccEEeeCCc----cceE------------EEeCCEEEEEECCC---CeEEEEECCCCCceEe
Confidence 2267999999987777776543 1111 12246777765322 2388877644334444
No 44
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.55 E-value=1.5e-05 Score=77.60 Aligned_cols=149 Identities=9% Similarity=0.022 Sum_probs=82.1
Q ss_pred hcceEEEcC-CCceeecCC----CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeecccc
Q 012630 74 TTQLVLATL-DGTVKEFGP----PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPL 147 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~----~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~ 147 (459)
.++|+++++ +|+.+++.. ......++|||||++|++... ....+.+|+++ .+....+...+.
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~------------~~~~v~v~~~~~~g~~~~~~~~~~ 129 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY------------HKGTAEVMKIAADGALTLTDTVQH 129 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET------------TTTEEEEEEECTTSCEEEEEEEEC
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC------------CCCEEEEEEeCCCCCeeecceeec
Confidence 368888888 777666554 334467899999999987752 13567888874 444444443322
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc----ccceeccce
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK----LDLRFRGVS 223 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~----~~~~~~~~~ 223 (459)
....|. .......+..+.|+|||+ |+.+. .+ .+.|++++.. -+| +...+.. .......+.
T Consensus 130 ~~~~p~-~~~~~~~~~~~~~spdg~--l~v~~---~~--------~~~v~~~~~~-~~g-~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 130 SGHGPR-PEQDGSHIHYTDLTPDNR--LAVID---LG--------SDKVYVYNVS-DAG-QLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp CCCCSS-TTCSSCCEEEEEECTTSC--EEEEE---TT--------TTEEEEEEEC-TTS-CEEEEEEEECCTTCCEEEEE
T ss_pred CCCCCC-ccccCCCceEEEECCCCc--EEEEe---CC--------CCEEEEEEEC-CCC-cEEEeeeEEcCCCCCCceEE
Confidence 221121 001123467799999998 44332 21 2245555540 023 4443321 111234579
Q ss_pred eCCCCcEEEEEeecCCccEEEEEEcCCC
Q 012630 224 WCDDSLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 224 Ws~D~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
|+|||..++.... ......+|.++..+
T Consensus 194 ~spdg~~l~v~~~-~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 194 FSPDGQYAFLAGE-LSSQIASLKYDTQT 220 (347)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEEEETTT
T ss_pred ECCCCCEEEEEeC-CCCEEEEEEecCCC
Confidence 9999864433221 24556677776543
No 45
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.53 E-value=4.4e-05 Score=73.79 Aligned_cols=138 Identities=9% Similarity=0.038 Sum_probs=81.1
Q ss_pred hcceEEEcC-CCcee-ecCCCc----------eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeee
Q 012630 74 TTQLVLATL-DGTVK-EFGPPA----------IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQ 141 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~----------~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~ 141 (459)
..+|+++|+ +|+.. .+..+. ....+.|||||++|++.... -...+++||.+.++...
T Consensus 110 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------~~~~i~~~d~~~~~~~~ 178 (353)
T 3vgz_A 110 NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-----------KESVIWVVDGGNIKLKT 178 (353)
T ss_dssp TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-----------SSCEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-----------CCceEEEEcCCCCceEE
Confidence 468999998 77654 332211 24679999999998777521 13568999987555433
Q ss_pred eecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc-----c
Q 012630 142 LCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL-----D 216 (459)
Q Consensus 142 lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~-----~ 216 (459)
.... . ...+..+.|+|||+ .|+... . .+.|++++. ..++....... .
T Consensus 179 ~~~~--~----------~~~~~~~~~s~dg~-~l~~~~-~-----------~~~i~~~d~---~~~~~~~~~~~~~~~~~ 230 (353)
T 3vgz_A 179 AIQN--T----------GKMSTGLALDSEGK-RLYTTN-A-----------DGELITIDT---ADNKILSRKKLLDDGKE 230 (353)
T ss_dssp EECC--C----------CTTCCCCEEETTTT-EEEEEC-T-----------TSEEEEEET---TTTEEEEEEECCCSSSC
T ss_pred EecC--C----------CCccceEEECCCCC-EEEEEc-C-----------CCeEEEEEC---CCCeEEEEEEcCCCCCC
Confidence 2221 0 12345789999999 666442 1 235777776 33343332222 1
Q ss_pred ceeccceeCCCCcEEEEEeecCCccEEEEEEcCCCCC
Q 012630 217 LRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 217 ~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
....++.|++|+..++.... ....++++++.+++
T Consensus 231 ~~~~~~~~s~dg~~l~~~~~---~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 231 HFFINISLDTARQRAFITDS---KAAEVLVVDTRNGN 264 (353)
T ss_dssp CCEEEEEEETTTTEEEEEES---SSSEEEEEETTTCC
T ss_pred cccceEEECCCCCEEEEEeC---CCCEEEEEECCCCc
Confidence 12345899999754443331 22358888887643
No 46
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.50 E-value=6.6e-05 Score=72.57 Aligned_cols=145 Identities=8% Similarity=-0.055 Sum_probs=86.8
Q ss_pred hcceEEEcC-CCceee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeeccccccc
Q 012630 74 TTQLVLATL-DGTVKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~p~~~~ 150 (459)
.++|+++|+ +|+... +..+.....+.|||||++|++... ....+++||.+++++ ..+.. ....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~------------~~~~v~~~d~~~~~~~~~~~~-~~~~- 133 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNT------------VNSAVTAIDAKTGEVKGRLVL-DDRK- 133 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEET------------TTTEEEEEETTTCCEEEEEES-CCCC-
T ss_pred CccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEec------------CCCEEEEEeCCCCeeEEEEec-CCCc-
Confidence 467999999 776553 333344568999999999877752 235789999875544 43322 1100
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc-ccceeccceeCCCCc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK-LDLRFRGVSWCDDSL 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~-~~~~~~~~~Ws~D~~ 229 (459)
.|. .....+++.+.|+|||+ .|+.....+ ...|++++. ..++...... .......+.|++|+.
T Consensus 134 ~~~--~~~~~~~~~~~~s~dg~-~l~~~~~~~----------~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 134 RTE--EVRPLQPRELVADDATN-TVYISGIGK----------ESVIWVVDG---GNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp CCS--SCCCCEEEEEEEETTTT-EEEEEEESS----------SCEEEEEET---TTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred ccc--ccCCCCCceEEECCCCC-EEEEEecCC----------CceEEEEcC---CCCceEEEecCCCCccceEEECCCCC
Confidence 000 01122467899999999 666543211 235888887 4334444333 233356789999975
Q ss_pred EEEEEeecCCccEEEEEEcCCCC
Q 012630 230 ALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
.++.... ...++++++.++
T Consensus 198 ~l~~~~~----~~~i~~~d~~~~ 216 (353)
T 3vgz_A 198 RLYTTNA----DGELITIDTADN 216 (353)
T ss_dssp EEEEECT----TSEEEEEETTTT
T ss_pred EEEEEcC----CCeEEEEECCCC
Confidence 5544332 235788888754
No 47
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.50 E-value=6.4e-05 Score=73.06 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=53.9
Q ss_pred ceEEEcC-CCceeecCC---CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 76 QLVLATL-DGTVKEFGP---PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 76 qL~~v~~-~G~~~~l~~---~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
.+|.+|. +|+.+.+.. ......+.|||||+ |+++... .-...+++|+++++..+.+......
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~----------~~~~~v~~~~~~~g~~~~~~~~~~~--- 84 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE----------DDEGGIAAWQIDGQTAHKLNTVVAP--- 84 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE----------TTEEEEEEEEEETTEEEEEEEEEEE---
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEec----------CCCceEEEEEecCCcEEEeeeeecC---
Confidence 4667776 787765432 33446789999999 7666531 0136789999987777666553211
Q ss_pred cccccccccceeeeEEecCCCceEEEEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVE 179 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~ 179 (459)
...+..+.|+|||+ .|+.+.
T Consensus 85 -------~~~p~~~a~spdg~-~l~~~~ 104 (347)
T 3hfq_A 85 -------GTPPAYVAVDEARQ-LVYSAN 104 (347)
T ss_dssp -------SCCCSEEEEETTTT-EEEEEE
T ss_pred -------CCCCEEEEECCCCC-EEEEEe
Confidence 23456889999999 676553
No 48
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.47 E-value=8.1e-05 Score=71.54 Aligned_cols=140 Identities=11% Similarity=0.033 Sum_probs=78.6
Q ss_pred hcceEEEcC-CCce--eecCCCceeee-cccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccc
Q 012630 74 TTQLVLATL-DGTV--KEFGPPAIYTA-VEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVE 149 (459)
Q Consensus 74 ~sqL~~v~~-~G~~--~~l~~~~~~~~-~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~ 149 (459)
..+|+++|+ +|+. +.+........ +.|||||++|+ +.... .....+++||++.++.......
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~---------~~~~~i~v~d~~~~~~~~~~~~---- 126 (331)
T 3u4y_A 61 CQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTGL---------NHPFNMQSYSFLKNKFISTIPI---- 126 (331)
T ss_dssp TCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCCS---------SSSCEEEEEETTTTEEEEEEEC----
T ss_pred CCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-EecCC---------CCcccEEEEECCCCCeEEEEEC----
Confidence 348999999 7764 34444443445 99999999998 43210 0112799999876554433221
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCC-CeEEeccCCCCCCCCce----Eeccccceecccee
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPR-DIIYTQPAEPVEGEEPE----ILHKLDLRFRGVSW 224 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~-~~l~~~~~~pf~g~~~~----~L~~~~~~~~~~~W 224 (459)
...+..+.|+|||+ .|+.+...+. . -.+|.++. .| ... .+.........+.|
T Consensus 127 ---------~~~~~~~~~spdg~-~l~~~~~~~~---------~~i~~~~~~~---~g-~~~~~~~~~~~~~~~~~~~~~ 183 (331)
T 3u4y_A 127 ---------PYDAVGIAISPNGN-GLILIDRSSA---------NTVRRFKIDA---DG-VLFDTGQEFISGGTRPFNITF 183 (331)
T ss_dssp ---------CTTEEEEEECTTSS-CEEEEEETTT---------TEEEEEEECT---TC-CEEEEEEEEECSSSSEEEEEE
T ss_pred ---------CCCccceEECCCCC-EEEEEecCCC---------ceEEEEEECC---CC-cEeecCCccccCCCCccceEE
Confidence 22457899999998 5665432111 1 13444443 33 321 11222233456899
Q ss_pred CCCCcEEEEEeecCCccEEEEEEcCCCCC
Q 012630 225 CDDSLALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 225 s~D~~al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
++||..++.... .. ..++++++.+++
T Consensus 184 spdg~~l~v~~~-~~--~~v~v~d~~~~~ 209 (331)
T 3u4y_A 184 TPDGNFAFVANL-IG--NSIGILETQNPE 209 (331)
T ss_dssp CTTSSEEEEEET-TT--TEEEEEECSSTT
T ss_pred CCCCCEEEEEeC-CC--CeEEEEECCCCc
Confidence 999854433332 12 246677776543
No 49
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.45 E-value=0.00017 Score=72.13 Aligned_cols=137 Identities=9% Similarity=0.039 Sum_probs=84.2
Q ss_pred cceEEEcC-CCceeecCC-------CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeecc
Q 012630 75 TQLVLATL-DGTVKEFGP-------PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCEL 145 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~-------~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~ 145 (459)
+.|+++++ +|+...... .+.+..+.|+|||+.++..+ ....+.+||++++ .+..+...
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~-------------~d~~v~~~d~~~~~~~~~~~~~ 210 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM-------------QANAVHVFDLKTLAYKATVDLT 210 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG-------------GGTEEEEEETTTCCEEEEEECS
T ss_pred CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC-------------CCCEEEEEECCCceEEEEEcCC
Confidence 46899998 777665332 33567899999998664442 1367899998754 34433211
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeC
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWC 225 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws 225 (459)
...+..+.|+||++ .|+.+... ...|++++. ..++.............+.|+
T Consensus 211 -------------~~~~~~~~~~~~~~-~l~~~~~~-----------~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~ 262 (433)
T 3bws_A 211 -------------GKWSKILLYDPIRD-LVYCSNWI-----------SEDISVIDR---KTKLEIRKTDKIGLPRGLLLS 262 (433)
T ss_dssp -------------SSSEEEEEEETTTT-EEEEEETT-----------TTEEEEEET---TTTEEEEECCCCSEEEEEEEC
T ss_pred -------------CCCeeEEEEcCCCC-EEEEEecC-----------CCcEEEEEC---CCCcEEEEecCCCCceEEEEc
Confidence 23456889999998 66544321 235777776 433544444444456778999
Q ss_pred CCCcEEEEEeecCC----ccEEEEEEcCCCC
Q 012630 226 DDSLALVQETWFKT----TQTRTWLISPGSK 252 (459)
Q Consensus 226 ~D~~al~~~~~~~~----~~~~ly~v~~~~~ 252 (459)
+|+..|+....... ....++++++.++
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 99855444332111 2456888887654
No 50
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.41 E-value=1.9e-05 Score=77.45 Aligned_cols=170 Identities=11% Similarity=0.088 Sum_probs=90.6
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-------eeee---ecccccccccccccccccceeee
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-------VRQL---CELPLVENIPIAYNSVREGMRLI 165 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-------~~~l---t~~p~~~~~P~~~~~~~~~~r~~ 165 (459)
..+.|||||++|++... ....+.+|+++... .... ..... ....+++.+
T Consensus 158 ~~~~~spdg~~l~~~~~------------~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~ 216 (361)
T 3scy_A 158 HCVRITPDGKYLLADDL------------GTDQIHKFNINPNANADNKEKFLTKGTPEAFKV---------APGSGPRHL 216 (361)
T ss_dssp EEEEECTTSSEEEEEET------------TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC---------CTTCCEEEE
T ss_pred eEEEECCCCCEEEEEeC------------CCCEEEEEEEcCCCCcccccceeecccccceec---------CCCCCCeEE
Confidence 56899999999988752 23567788765221 1111 00000 113467889
Q ss_pred EEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc---c---ceeccceeCCCCcEEEEEeecC-
Q 012630 166 SWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL---D---LRFRGVSWCDDSLALVQETWFK- 238 (459)
Q Consensus 166 ~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~---~---~~~~~~~Ws~D~~al~~~~~~~- 238 (459)
.|+|||+ .|+.+... .+.|++++. .+++.+.+... . .....+.|++||..|+.... .
T Consensus 217 ~~spdg~-~l~v~~~~-----------~~~v~v~~~---~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~-~~ 280 (361)
T 3scy_A 217 IFNSDGK-FAYLINEI-----------GGTVIAFRY---ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR-LK 280 (361)
T ss_dssp EECTTSS-EEEEEETT-----------TCEEEEEEE---ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC-SS
T ss_pred EEcCCCC-EEEEEcCC-----------CCeEEEEEe---cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC-CC
Confidence 9999998 66654311 234666665 33344333221 1 11246899999865544332 3
Q ss_pred CccEEEEEEcCCCCCCCceEEeecCCCCccCCCCCCC-eeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEEE
Q 012630 239 TTQTRTWLISPGSKDTAPLILFDRSSEDVYSDPGLPM-MRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLDL 317 (459)
Q Consensus 239 ~~~~~ly~v~~~~~~~~~~~l~d~~~~d~y~~pg~~~-~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~~ 317 (459)
.....+|.+++.++. .+.+...... ..+. ..+++||++++.. + .+.+.-.+++
T Consensus 281 ~~~i~v~~~~~~~g~--~~~~~~~~~g------~~~~~~~~spdg~~l~~~--------------~----~~~~~v~v~~ 334 (361)
T 3scy_A 281 ADGVAIFKVDETNGT--LTKVGYQLTG------IHPRNFIITPNGKYLLVA--------------C----RDTNVIQIFE 334 (361)
T ss_dssp SCEEEEEEECTTTCC--EEEEEEEECS------SCCCEEEECTTSCEEEEE--------------E----TTTTEEEEEE
T ss_pred CCEEEEEEEcCCCCc--EEEeeEecCC------CCCceEEECCCCCEEEEE--------------E----CCCCCEEEEE
Confidence 456778888765543 2333211110 1111 2457777755433 2 1122334667
Q ss_pred EECCCCceEEE
Q 012630 318 FNINTGSKERI 328 (459)
Q Consensus 318 ~~l~tg~~~~l 328 (459)
+|+++|+.+.+
T Consensus 335 ~d~~~g~~~~~ 345 (361)
T 3scy_A 335 RDQATGLLTDI 345 (361)
T ss_dssp ECTTTCCEEEC
T ss_pred EECCCCcEeec
Confidence 78888877654
No 51
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.32 E-value=0.00029 Score=67.70 Aligned_cols=149 Identities=11% Similarity=0.013 Sum_probs=83.7
Q ss_pred hcceEEEcC-CCcee-ecCCCc--eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccc
Q 012630 74 TTQLVLATL-DGTVK-EFGPPA--IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVE 149 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~--~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~ 149 (459)
..+|+++|+ +|+.. .+..+. ....+.|||||++|+++.. ....+++||+++++.......+..
T Consensus 20 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~------------~~~~i~~~d~~t~~~~~~~~~~~~- 86 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN------------HYGDIYGIDLDTCKNTFHANLSSV- 86 (349)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET------------TTTEEEEEETTTTEEEEEEESCCS-
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC------------CCCcEEEEeCCCCcEEEEEEcccc-
Confidence 468999998 77654 333333 4568999999998877742 236789999875554332222110
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEec--cCCccccccCCCCeEEeccCCCCCCCCceE---eccccceecccee
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQ--DGGAAKVEVSPRDIIYTQPAEPVEGEEPEI---LHKLDLRFRGVSW 224 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~--d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~---L~~~~~~~~~~~W 224 (459)
| ......+..+.|+|||+ .|+..... ...+ ... .....|++++. ..++... ..........+.|
T Consensus 87 --~---~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~-~~~-~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~~~~ 155 (349)
T 1jmx_B 87 --P---GEVGRSMYSFAISPDGK-EVYATVNPTQRLND-HYV-VKPPRLEVFST---ADGLEAKPVRTFPMPRQVYLMRA 155 (349)
T ss_dssp --T---TEEEECSSCEEECTTSS-EEEEEEEEEEECSS-CEE-ECCCEEEEEEG---GGGGGBCCSEEEECCSSCCCEEE
T ss_pred --c---ccccccccceEECCCCC-EEEEEccccccccc-ccc-cCCCeEEEEEC---CCccccceeeeccCCCcccceeE
Confidence 0 00012356789999999 66655421 0000 000 01247888876 3323222 1222333556779
Q ss_pred CCCCcEEEEEeecCCccEEEEEEcCCCCC
Q 012630 225 CDDSLALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 225 s~D~~al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
++||.+++. . . +++++++.+++
T Consensus 156 s~dg~l~~~-~---~---~i~~~d~~~~~ 177 (349)
T 1jmx_B 156 ADDGSLYVA-G---P---DIYKMDVKTGK 177 (349)
T ss_dssp CTTSCEEEE-S---S---SEEEECTTTCC
T ss_pred CCCCcEEEc-c---C---cEEEEeCCCCc
Confidence 999874442 2 1 18889887653
No 52
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.28 E-value=0.00028 Score=67.49 Aligned_cols=136 Identities=13% Similarity=0.085 Sum_probs=72.2
Q ss_pred eEEEcC-CCceeecC---CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeecccccccc
Q 012630 77 LVLATL-DGTVKEFG---PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENI 151 (459)
Q Consensus 77 L~~v~~-~G~~~~l~---~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~ 151 (459)
+|.++. +|+.+.+. .......++|||||++|++.... ...+.+||+. |.....+...+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------~~~i~~~d~~~~~~~~~~~~~~----- 126 (343)
T 1ri6_A 64 AYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN------------AGNVSVTRLEDGLPVGVVDVVE----- 126 (343)
T ss_dssp EEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT------------TTEEEEEEEETTEEEEEEEEEC-----
T ss_pred EEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC------------CCeEEEEECCCCcccccccccc-----
Confidence 333444 56655432 23445689999999999887521 3568888873 32222222211
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCC-CCceEec------cccceecccee
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG-EEPEILH------KLDLRFRGVSW 224 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g-~~~~~L~------~~~~~~~~~~W 224 (459)
....+..+.|+|||+ .|+..... .+.|++++. .. ++...+. ........+.|
T Consensus 127 ------~~~~~~~~~~s~dg~-~l~~~~~~-----------~~~v~~~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 127 ------GLDGCHSANISPDNR-TLWVPALK-----------QDRICLFTV---SDDGHLVAQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp ------CCTTBCCCEECTTSS-EEEEEEGG-----------GTEEEEEEE---CTTSCEEEEEEEEEECSTTCCEEEEEE
T ss_pred ------CCCCceEEEECCCCC-EEEEecCC-----------CCEEEEEEe---cCCCceeeecccccccCCCCCcceEEE
Confidence 122456789999998 66544311 124666655 22 2443222 11223445889
Q ss_pred CCCCcEEEEEeecCCccEEEEEEcCCC
Q 012630 225 CDDSLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 225 s~D~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
++|+..++.... ......+|.++..+
T Consensus 186 ~pdg~~l~~~~~-~~~~i~~~~~~~~~ 211 (343)
T 1ri6_A 186 HPNEQYAYCVNE-LNSSVDVWELKDPH 211 (343)
T ss_dssp CTTSSEEEEEET-TTTEEEEEESSCTT
T ss_pred CCCCCEEEEEeC-CCCEEEEEEecCCC
Confidence 999854433321 23445555554443
No 53
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.11 E-value=6.6e-05 Score=73.48 Aligned_cols=130 Identities=10% Similarity=0.013 Sum_probs=76.5
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
......+.|||||++|++... ....+.+|+++++....+...+.. | ....+++.+.|+|||
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~------------~~~~v~v~~~~~g~~~~~~~~~~~---~----~~~~~~~~i~~spdg 270 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINE------------IGGTVIAFRYADGMLDEIQTVAAD---T----VNAQGSGDIHLSPDG 270 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEET------------TTCEEEEEEEETTEEEEEEEEESC---S----SCCCCEEEEEECTTS
T ss_pred CCCCeEEEEcCCCCEEEEEcC------------CCCeEEEEEecCCceEEeEEEecC---C----CCCCCcccEEECCCC
Confidence 334468999999999877742 236688999876665544433211 1 112345789999999
Q ss_pred CceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc--ccceeccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 172 PSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK--LDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 172 ~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~--~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
+ .|+... .+. +. .-.||.++. .+++.+.+.. .......++|+|||..|+.... +.....+|.+++
T Consensus 271 ~-~l~v~~-~~~-~~------~i~v~~~~~---~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~-~~~~v~v~~~d~ 337 (361)
T 3scy_A 271 K-YLYASN-RLK-AD------GVAIFKVDE---TNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACR-DTNVIQIFERDQ 337 (361)
T ss_dssp S-EEEEEE-CSS-SC------EEEEEEECT---TTCCEEEEEEEECSSCCCEEEECTTSCEEEEEET-TTTEEEEEEECT
T ss_pred C-EEEEEC-CCC-CC------EEEEEEEcC---CCCcEEEeeEecCCCCCceEEECCCCCEEEEEEC-CCCCEEEEEEEC
Confidence 9 665432 110 10 123555553 2335554433 2223456899999865554332 356678898998
Q ss_pred CCCC
Q 012630 250 GSKD 253 (459)
Q Consensus 250 ~~~~ 253 (459)
++++
T Consensus 338 ~~g~ 341 (361)
T 3scy_A 338 ATGL 341 (361)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 7653
No 54
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.05 E-value=0.0011 Score=63.43 Aligned_cols=143 Identities=11% Similarity=0.118 Sum_probs=76.5
Q ss_pred hcceEEEcC-CCce---e-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeee--cc
Q 012630 74 TTQLVLATL-DGTV---K-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLC--EL 145 (459)
Q Consensus 74 ~sqL~~v~~-~G~~---~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt--~~ 145 (459)
.+.|.++++ +|.. . .+........+.|||||++|++... ....+.+||+.. +....+. ..
T Consensus 105 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------------~~~~v~~~d~~~~~~~~~~~~~~~ 172 (343)
T 1ri6_A 105 AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL------------KQDRICLFTVSDDGHLVAQDPAEV 172 (343)
T ss_dssp TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG------------GGTEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC------------CCCEEEEEEecCCCceeeeccccc
Confidence 355777776 4432 2 2223344578999999999977641 135688999765 4444332 11
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc---ccc-----
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK---LDL----- 217 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~---~~~----- 217 (459)
.. .....++.+.|+|||+ .|+.+... .+.|.+++..+ ..++.+.+.. ...
T Consensus 173 ~~---------~~~~~~~~~~~~pdg~-~l~~~~~~-----------~~~i~~~~~~~-~~g~~~~~~~~~~~~~~~~~~ 230 (343)
T 1ri6_A 173 TT---------VEGAGPRHMVFHPNEQ-YAYCVNEL-----------NSSVDVWELKD-PHGNIECVQTLDMMPENFSDT 230 (343)
T ss_dssp EC---------STTCCEEEEEECTTSS-EEEEEETT-----------TTEEEEEESSC-TTSCCEEEEEEECSCTTCCSC
T ss_pred cc---------CCCCCcceEEECCCCC-EEEEEeCC-----------CCEEEEEEecC-CCCcEEEEeeccccCcccccc
Confidence 11 1123567899999998 66655321 12344544411 1224332211 111
Q ss_pred -eeccceeCCCCcEEEEEeecCCccEEEEEEcCCC
Q 012630 218 -RFRGVSWCDDSLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 218 -~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
....+.|++|+..|+.... ......+|.++..+
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~-~~~~i~v~d~~~~~ 264 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDR-TASLITVFSVSEDG 264 (343)
T ss_dssp CCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTS
T ss_pred CCccceEECCCCCEEEEEec-CCCEEEEEEEcCCC
Confidence 1235899999854443331 24556666665433
No 55
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.01 E-value=0.0011 Score=63.22 Aligned_cols=143 Identities=8% Similarity=-0.027 Sum_probs=83.8
Q ss_pred hcceEEEcC-CCceeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccccc
Q 012630 74 TTQLVLATL-DGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P 152 (459)
..+|++++. +++.+.+..+.....+.++|||+ |++.. . ..++++|.+++..+.+...+. ..+
T Consensus 34 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~-l~v~~-~-------------~~l~~~d~~~g~~~~~~~~~~--~~~ 96 (297)
T 3g4e_A 34 AKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGG-YVATI-G-------------TKFCALNWKEQSAVVLATVDN--DKK 96 (297)
T ss_dssp TTEEEEEETTTCCEEEEECSSCEEEEEEBTTSS-EEEEE-T-------------TEEEEEETTTTEEEEEEECCT--TCS
T ss_pred CCEEEEEECCCCcEEEEeCCCceEEEEECCCCC-EEEEE-C-------------CeEEEEECCCCcEEEEEecCC--CCC
Confidence 356778887 66666665566667899999999 43432 1 468899988777776655321 111
Q ss_pred ccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEE-
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLAL- 231 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al- 231 (459)
...+..+.+.|||. |++..................||.++. +| +...+........+++|++|+..|
T Consensus 97 ------~~~~~di~~d~dG~--l~~~~~~~~~~~~~~~~~~~~l~~~d~---~g-~~~~~~~~~~~pngi~~spdg~~ly 164 (297)
T 3g4e_A 97 ------NNRFNDGKVDPAGR--YFAGTMAEETAPAVLERHQGALYSLFP---DH-HVKKYFDQVDISNGLDWSLDHKIFY 164 (297)
T ss_dssp ------SEEEEEEEECTTSC--EEEEEEECCSBTTBCCTTCEEEEEECT---TS-CEEEEEEEESBEEEEEECTTSCEEE
T ss_pred ------CCCCCCEEECCCCC--EEEecCCcccccccccCCCcEEEEEEC---CC-CEEEEeeccccccceEEcCCCCEEE
Confidence 23456889999987 333322111110000012357999987 65 655554433334679999998544
Q ss_pred EEEeecCCccEEEEEEcC
Q 012630 232 VQETWFKTTQTRTWLISP 249 (459)
Q Consensus 232 ~~~~~~~~~~~~ly~v~~ 249 (459)
+.+.. . ..|++++.
T Consensus 165 v~~~~--~--~~i~~~~~ 178 (297)
T 3g4e_A 165 YIDSL--S--YSVDAFDY 178 (297)
T ss_dssp EEEGG--G--TEEEEEEE
T ss_pred EecCC--C--CcEEEEec
Confidence 44332 2 24555543
No 56
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.96 E-value=0.00039 Score=69.34 Aligned_cols=146 Identities=8% Similarity=-0.011 Sum_probs=88.7
Q ss_pred hcceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 74 TTQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
.+.|+++|+ +|+.. .+........+.|||||++|++.......-. .-...+++||+.++........
T Consensus 233 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-----~~dg~i~~~d~~~~~~~~~~~~------ 301 (433)
T 3bws_A 233 SEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQE-----SGGGRLGIYSMDKEKLIDTIGP------ 301 (433)
T ss_dssp TTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTC-----SCCEEEEEEETTTTEEEEEEEE------
T ss_pred CCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccc-----cCCCeEEEEECCCCcEEeeccC------
Confidence 457888998 77554 3444556689999999999988864321100 0136789999875544333221
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLAL 231 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al 231 (459)
...++.+.|+||++ .|+.+... ...|++++. .+++.............+.|++|+..+
T Consensus 302 -------~~~~~~~~~~~~g~-~l~~~~~~-----------~~~v~v~d~---~~~~~~~~~~~~~~~~~~~~s~dg~~l 359 (433)
T 3bws_A 302 -------PGNKRHIVSGNTEN-KIYVSDMC-----------CSKIEVYDL---KEKKVQKSIPVFDKPNTIALSPDGKYL 359 (433)
T ss_dssp -------EECEEEEEECSSTT-EEEEEETT-----------TTEEEEEET---TTTEEEEEEECSSSEEEEEECTTSSEE
T ss_pred -------CCCcceEEECCCCC-EEEEEecC-----------CCEEEEEEC---CCCcEEEEecCCCCCCeEEEcCCCCEE
Confidence 12556889999998 66655322 235777777 433444444444456678999998544
Q ss_pred EEEeecCCc-----------cEEEEEEcCCCC
Q 012630 232 VQETWFKTT-----------QTRTWLISPGSK 252 (459)
Q Consensus 232 ~~~~~~~~~-----------~~~ly~v~~~~~ 252 (459)
+........ ...++++++.++
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred EEEecCCCccccccccccccceEEEEEECCCC
Confidence 433321110 236888887654
No 57
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.0095 Score=57.07 Aligned_cols=117 Identities=10% Similarity=-0.046 Sum_probs=73.5
Q ss_pred CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEec
Q 012630 91 PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRA 169 (459)
Q Consensus 91 ~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~Wsp 169 (459)
....+..++|||||++|+..+. ...+.+||+. +..+..+.. -...+..+.|+|
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~-------------dg~i~vwd~~~~~~~~~~~~-------------h~~~v~~~~~~~ 84 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSK-------------DSSASVWYSLNGERLGTLDG-------------HTGTIWSIDVDC 84 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEES-------------SSCEEEEETTTCCEEEEECC-------------CSSCEEEEEECT
T ss_pred eeceEEEEEEcCCCCEEEEEeC-------------CCEEEEEeCCCchhhhhhhh-------------cCCcEEEEEEcC
Confidence 3456789999999999987752 3678999976 444444432 123567899999
Q ss_pred CCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEEEEeec-C--CccEEEEE
Q 012630 170 DRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQETWF-K--TTQTRTWL 246 (459)
Q Consensus 170 Dg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~~~~~~-~--~~~~~ly~ 246 (459)
|+. .|+... . ...|++++. ..++.............+.|++++..|+..... . .+...+|.
T Consensus 85 ~~~-~l~s~~-~-----------dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d 148 (369)
T 3zwl_B 85 FTK-YCVTGS-A-----------DYSIKLWDV---SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYE 148 (369)
T ss_dssp TSS-EEEEEE-T-----------TTEEEEEET---TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred CCC-EEEEEe-C-----------CCeEEEEEC---CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEE
Confidence 988 555331 1 125667776 433555544455567779999998666654321 1 24555665
Q ss_pred EcC
Q 012630 247 ISP 249 (459)
Q Consensus 247 v~~ 249 (459)
+..
T Consensus 149 ~~~ 151 (369)
T 3zwl_B 149 IER 151 (369)
T ss_dssp EEE
T ss_pred ecC
Confidence 543
No 58
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.84 E-value=0.00057 Score=65.14 Aligned_cols=141 Identities=9% Similarity=-0.022 Sum_probs=78.7
Q ss_pred hcceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 74 TTQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
.++|+++++ +++.. .+..+.....+.|||||++|++.. ..+++||+++++........ .
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~---------------~~i~~~d~~~~~~~~~~~~~--~-- 174 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG---------------RDLHVMDPEAGTLVEDKPIQ--S-- 174 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEES---------------SSEEEEETTTTEEEEEECST--T--
T ss_pred CceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC---------------CeEEEEECCCCcEeeeeecc--c--
Confidence 478999999 66554 344444456889999999987772 46899998766544332211 0
Q ss_pred cccccccccceeeeEEecCCCceEEEEEec------------cCCccccccCCCCeEEeccCCCCCCCCceEecc--ccc
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQ------------DGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK--LDL 217 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~------------d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~--~~~ 217 (459)
..+.+.|+|||. .|+..... ..++..........|++++. ..++...+.. ...
T Consensus 175 ---------~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~~~~~ 241 (337)
T 1pby_B 175 ---------WEAETYAQPDVL-AVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL---ETGEMAMREVRIMDV 241 (337)
T ss_dssp ---------TTTTTBCCCBCC-CCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET---TTCCEEEEEEEECSS
T ss_pred ---------cCCCceeCCCcc-EEeeeccCCCceeeeeeccccccccccccccccceEEEeC---CCCCceEeecCCCCC
Confidence 011337899988 44322110 00000000011125778887 5445543221 122
Q ss_pred eeccceeCCCCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 218 RFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 218 ~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
...++.|++|+..++... ..++++++.++
T Consensus 242 ~~~~~~~s~dg~~l~~~~------~~v~~~d~~~~ 270 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGAY------NVLESFDLEKN 270 (337)
T ss_dssp CEEEEEECTTSSEEEEEE------SEEEEEETTTT
T ss_pred ceeeEEECCCCCEEEEeC------CeEEEEECCCC
Confidence 344589999985444332 25888888754
No 59
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.82 E-value=0.021 Score=56.54 Aligned_cols=93 Identities=11% Similarity=0.044 Sum_probs=52.3
Q ss_pred ceEEEcC-CCceee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeeccccccccc
Q 012630 76 QLVLATL-DGTVKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLVENIP 152 (459)
Q Consensus 76 qL~~v~~-~G~~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~~~~P 152 (459)
.+.++|. ++++.. +..+.. ..+.+||||++|++.....+. +........+.++|.+. +.+..+. .+. ...+
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~-p~i~~spDg~~lyv~n~~~~~---~~rg~~~~~v~viD~~t~~~~~~i~-~~~-~~~~ 121 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFL-PNPVAAHSGSEFALASTSFSR---IAKGKRTDYVEVFDPVTFLPIADIE-LPD-APRF 121 (373)
T ss_pred EEEEEECCCCeEEEEecCCCC-CCeEECCCCCEEEEEeccccc---cccCCCCCeEEEEECCCCcEEEEEE-CCC-cccc
Confidence 7899998 776553 333333 389999999999877421000 00000124578889763 3333332 110 0111
Q ss_pred ccccccccceeeeEEecCCCceEEEEE
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVE 179 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~ 179 (459)
. ....++.+.|||||+ +||...
T Consensus 122 ---~-~g~~p~~~~~spDG~-~l~v~n 143 (373)
T 2mad_H 122 ---D-VGPYSWMNANTPNNA-DLLFFQ 143 (373)
T ss_pred ---c-cCCCccceEECCCCC-EEEEEe
Confidence 0 113567899999999 777553
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.81 E-value=0.011 Score=57.83 Aligned_cols=137 Identities=9% Similarity=0.064 Sum_probs=81.2
Q ss_pred hcceEEEcC-CCceeecCC----CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccc
Q 012630 74 TTQLVLATL-DGTVKEFGP----PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLV 148 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~----~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~ 148 (459)
.+.|.++++ ++..+.+.. ...+..+.|||||++|+..+. ...+.+||+.++.+..+...
T Consensus 140 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~~~~~~h--- 203 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS-------------TGRLLLLGLDGHEIFKEKLH--- 203 (383)
T ss_dssp TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEET-------------TSEEEEEETTSCEEEEEECS---
T ss_pred CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECC-------------CCCEEEEECCCCEEEEeccC---
Confidence 356777777 444444433 244679999999999877753 36789999987766665432
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCC-CCceEeccccceeccceeCC-
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG-EEPEILHKLDLRFRGVSWCD- 226 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g-~~~~~L~~~~~~~~~~~Ws~- 226 (459)
...+..+.|+|+++..|+ +...|+ .|.+++..-... +..............+.|++
T Consensus 204 ----------~~~v~~~~~~~~~~~~l~-s~~~d~-----------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 261 (383)
T 3ei3_B 204 ----------KAKVTHAEFNPRCDWLMA-TSSVDA-----------TVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPT 261 (383)
T ss_dssp ----------SSCEEEEEECSSCTTEEE-EEETTS-----------EEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTT
T ss_pred ----------CCcEEEEEECCCCCCEEE-EEeCCC-----------EEEEEeCCCCCcccceEEEecCCCceEEEEEcCC
Confidence 235678999999984444 332222 345554400010 12222223344567789999
Q ss_pred CCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 227 DSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 227 D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
|+..|+.... ++..++| +..++
T Consensus 262 ~~~~l~~~~~--d~~i~iw--d~~~~ 283 (383)
T 3ei3_B 262 DSTKLLTTDQ--RNEIRVY--SSYDW 283 (383)
T ss_dssp TSCEEEEEES--SSEEEEE--ETTBT
T ss_pred CCCEEEEEcC--CCcEEEE--ECCCC
Confidence 8876665442 3444444 54444
No 61
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.02 Score=57.58 Aligned_cols=114 Identities=10% Similarity=0.087 Sum_probs=68.7
Q ss_pred eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC---CceeeeeecccccccccccccccccceeeeEEecC
Q 012630 94 IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD---GKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 94 ~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~---g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
.+..++|||||++|+++... ...+.|||+. |+..+.+... .....+..+.|+||
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~------------dg~v~iwd~~~~~~~~~~~~~~~-----------~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADS------------DKSLLVFDVDKTSKNVLKLRKRF-----------CFSKRPNAISIAED 160 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGG------------GTEEEEEEECSSSSSCEEEEEEE-----------ECSSCEEEEEECTT
T ss_pred ceEEEEEcCCCCEEEEEECC------------CCeEEEEECcCCCCceeeeeecc-----------cCCCCceEEEEcCC
Confidence 46789999999998676522 3668899976 4444444321 11235668999999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-----EeccccceeccceeCCC---CcEEEEEeecCCccE
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-----ILHKLDLRFRGVSWCDD---SLALVQETWFKTTQT 242 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-----~L~~~~~~~~~~~Ws~D---~~al~~~~~~~~~~~ 242 (459)
|. .|+... . ...|+.++. ..++.. .+..-......+.|++| +..|++... +...
T Consensus 161 ~~-~l~~~~-~-----------~g~v~~~~~---~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~--d~~i 222 (450)
T 2vdu_B 161 DT-TVIIAD-K-----------FGDVYSIDI---NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR--DEHI 222 (450)
T ss_dssp SS-EEEEEE-T-----------TSEEEEEET---TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET--TSCE
T ss_pred CC-EEEEEe-C-----------CCcEEEEec---CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC--CCcE
Confidence 98 665432 1 224666665 222222 22222334666899998 766665542 4556
Q ss_pred EEEEEc
Q 012630 243 RTWLIS 248 (459)
Q Consensus 243 ~ly~v~ 248 (459)
++|-+.
T Consensus 223 ~vwd~~ 228 (450)
T 2vdu_B 223 KISHYP 228 (450)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 666654
No 62
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.73 E-value=0.018 Score=54.53 Aligned_cols=131 Identities=13% Similarity=0.170 Sum_probs=77.2
Q ss_pred cceEEEcC-CCceee-cC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeeccccccc
Q 012630 75 TQLVLATL-DGTVKE-FG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~~-l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~~~ 150 (459)
+.|.+.++ +|+... +. ....+..+.|||||++|+..+. ...+.+||+.. ..+..+...
T Consensus 45 g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------------d~~i~vwd~~~~~~~~~~~~~----- 106 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD-------------DKTLKIWDVSSGKCLKTLKGH----- 106 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTCCEEEEEECC-----
T ss_pred CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC-------------CCEEEEEECCCCcEEEEEcCC-----
Confidence 45666666 565443 33 2445679999999999987753 36789999764 334433221
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-eEeccccceeccceeCCCCc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-EILHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-~~L~~~~~~~~~~~Ws~D~~ 229 (459)
...+..+.|+|++. .|+.. ..| ..|.+++. ..++. ..+.........+.|++++.
T Consensus 107 --------~~~v~~~~~~~~~~-~l~s~-~~d-----------~~i~iwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (312)
T 4ery_A 107 --------SNYVFCCNFNPQSN-LIVSG-SFD-----------ESVRIWDV---KTGKCLKTLPAHSDPVSAVHFNRDGS 162 (312)
T ss_dssp --------SSCEEEEEECSSSS-EEEEE-ETT-----------SCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred --------CCCEEEEEEcCCCC-EEEEE-eCC-----------CcEEEEEC---CCCEEEEEecCCCCcEEEEEEcCCCC
Confidence 22456789999988 55532 211 24666665 32233 23333344467789999986
Q ss_pred EEEEEeecCCccEEEEEEcCCC
Q 012630 230 ALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v~~~~ 251 (459)
.|+.... ++..++| +..+
T Consensus 163 ~l~~~~~--d~~i~~w--d~~~ 180 (312)
T 4ery_A 163 LIVSSSY--DGLCRIW--DTAS 180 (312)
T ss_dssp EEEEEET--TSCEEEE--ETTT
T ss_pred EEEEEeC--CCcEEEE--ECCC
Confidence 6665442 3444444 4443
No 63
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.70 E-value=0.003 Score=66.12 Aligned_cols=135 Identities=9% Similarity=0.039 Sum_probs=79.9
Q ss_pred hhcceEEEcC-CCceee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEec--C-Cceeeeeecccc
Q 012630 73 TTTQLVLATL-DGTVKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTA--D-GKFVRQLCELPL 147 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~--~-g~~~~~lt~~p~ 147 (459)
..+.|.++|. +|+... +..+.....+.+||||++|++.+. ...+.+||+ . +..+..|..
T Consensus 157 ~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~-------------d~~V~v~D~~~~t~~~~~~i~~--- 220 (543)
T 1nir_A 157 DAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGR-------------DARIDMIDLWAKEPTKVAEIKI--- 220 (543)
T ss_dssp GGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEET-------------TSEEEEEETTSSSCEEEEEEEC---
T ss_pred CCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECC-------------CCeEEEEECcCCCCcEEEEEec---
Confidence 3457888888 776543 332333568999999999977752 266899998 4 333333321
Q ss_pred cccccccccccccceeeeEEec----CCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc--------
Q 012630 148 VENIPIAYNSVREGMRLISWRA----DRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL-------- 215 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~Wsp----Dg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~-------- 215 (459)
..+++.+.+|| ||+ +|+..... -..|.++|. ..+++......
T Consensus 221 -----------g~~p~~va~sp~~~~dg~-~l~v~~~~-----------~~~v~v~D~---~t~~~~~~i~~~g~~~~~~ 274 (543)
T 1nir_A 221 -----------GIEARSVESSKFKGYEDR-YTIAGAYW-----------PPQFAIMDG---ETLEPKQIVSTRGMTVDTQ 274 (543)
T ss_dssp -----------CSEEEEEEECCSTTCTTT-EEEEEEEE-----------SSEEEEEET---TTCCEEEEEECCEECSSSC
T ss_pred -----------CCCcceEEeCCCcCCCCC-EEEEEEcc-----------CCeEEEEec---cccccceeecccCcccCcc
Confidence 23678999999 999 66544321 124556665 32344443322
Q ss_pred ----cceeccceeCCCCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 216 ----DLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 216 ----~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
..+...+.+++|+..++.... + ...|++++..+.
T Consensus 275 ~~~~~~~v~~i~~s~~~~~~~vs~~-~--~g~i~vvd~~~~ 312 (543)
T 1nir_A 275 TYHPEPRVAAIIASHEHPEFIVNVK-E--TGKVLLVNYKDI 312 (543)
T ss_dssp CEESCCCEEEEEECSSSSEEEEEET-T--TTEEEEEECTTS
T ss_pred ccccCCceEEEEECCCCCEEEEEEC-C--CCeEEEEEecCC
Confidence 114456788987644443331 1 235888887654
No 64
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.69 E-value=0.0061 Score=64.39 Aligned_cols=135 Identities=12% Similarity=0.159 Sum_probs=78.6
Q ss_pred cceEEEcC-CCc-eeecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 75 TQLVLATL-DGT-VKEFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 75 sqL~~v~~-~G~-~~~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
..+.+.++ +++ .+.|. ....+..++|||||++||-.+. ...+.|||+..+....+...+
T Consensus 39 ~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~-------------d~~v~lWd~~~~~~~~~~~~~----- 100 (611)
T 1nr0_A 39 TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV-------------HGNVRIWDTTQTTHILKTTIP----- 100 (611)
T ss_dssp TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEET-------------TSEEEEEESSSTTCCEEEEEE-----
T ss_pred CEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeC-------------CCCEEEeECCCCcceeeEeec-----
Confidence 35666676 554 44454 3456789999999999987763 367899998532211111111
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCC-cE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDS-LA 230 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~-~a 230 (459)
.-...+..+.|+|||+ .|+-+... . + ....|+.++. |.....|..-......+.|+||+ ..
T Consensus 101 -----~~~~~v~~v~fs~dg~-~l~~~~~~-~-~------~~~~v~~wd~----~~~~~~l~gh~~~v~~v~f~p~~~~~ 162 (611)
T 1nr0_A 101 -----VFSGPVKDISWDSESK-RIAAVGEG-R-E------RFGHVFLFDT----GTSNGNLTGQARAMNSVDFKPSRPFR 162 (611)
T ss_dssp -----CSSSCEEEEEECTTSC-EEEEEECC-S-S------CSEEEEETTT----CCBCBCCCCCSSCEEEEEECSSSSCE
T ss_pred -----ccCCceEEEEECCCCC-EEEEEECC-C-C------ceeEEEEeeC----CCCcceecCCCCCceEEEECCCCCeE
Confidence 1123567899999999 66643211 1 0 0135777766 32333343334446678999987 45
Q ss_pred EEEEeecCCccEEEEEE
Q 012630 231 LVQETWFKTTQTRTWLI 247 (459)
Q Consensus 231 l~~~~~~~~~~~~ly~v 247 (459)
|+... .+...++|-.
T Consensus 163 l~s~s--~D~~v~lwd~ 177 (611)
T 1nr0_A 163 IISGS--DDNTVAIFEG 177 (611)
T ss_dssp EEEEE--TTSCEEEEET
T ss_pred EEEEe--CCCeEEEEEC
Confidence 66544 2455667753
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.62 E-value=0.0012 Score=62.74 Aligned_cols=130 Identities=8% Similarity=0.006 Sum_probs=82.4
Q ss_pred hcceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 74 TTQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
.+.|.++++ +++.. .+.....+..+.|||||++|++.+. ...+.+||+..++...+..
T Consensus 204 dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------~~~i~~~~~~~~~~~~~~~------- 263 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME-------------SSNVEVLHVNKPDKYQLHL------- 263 (337)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTSSCEEEECC-------
T ss_pred CCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcC-------------CCcEEEEECCCCCeEEEcC-------
Confidence 456777777 55443 3444555678999999999988753 3678999988665544322
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLAL 231 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al 231 (459)
....+..+.|+||++ .|+.. .. ...|++++. ..++.............+.|++|+..|
T Consensus 264 ------~~~~v~~~~~~~~~~-~l~~~-~~-----------dg~i~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l 321 (337)
T 1gxr_A 264 ------HESCVLSLKFAYCGK-WFVST-GK-----------DNLLNAWRT---PYGASIFQSKESSSVLSCDISVDDKYI 321 (337)
T ss_dssp ------CSSCEEEEEECTTSS-EEEEE-ET-----------TSEEEEEET---TTCCEEEEEECSSCEEEEEECTTSCEE
T ss_pred ------CccceeEEEECCCCC-EEEEe-cC-----------CCcEEEEEC---CCCeEEEEecCCCcEEEEEECCCCCEE
Confidence 123567899999998 55532 11 124666666 333444333344456778999998666
Q ss_pred EEEeecCCccEEEEEE
Q 012630 232 VQETWFKTTQTRTWLI 247 (459)
Q Consensus 232 ~~~~~~~~~~~~ly~v 247 (459)
+... .++..++|.+
T Consensus 322 ~~~~--~dg~i~iw~~ 335 (337)
T 1gxr_A 322 VTGS--GDKKATVYEV 335 (337)
T ss_dssp EEEE--TTSCEEEEEE
T ss_pred EEec--CCCeEEEEEE
Confidence 6544 2455666654
No 66
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.61 E-value=0.0065 Score=61.03 Aligned_cols=131 Identities=11% Similarity=0.100 Sum_probs=73.7
Q ss_pred cceEEEcC-CCceeecCC----CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccc
Q 012630 75 TQLVLATL-DGTVKEFGP----PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVE 149 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~----~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~ 149 (459)
+.|.++|+ ++..+.+.. ...+..+.|||||++|+.... ...+.+||+.|+.+..+..
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-------------dg~i~~wd~~~~~~~~~~~----- 248 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN-------------VGNVILLNMDGKELWNLRM----- 248 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS-------------SSBEEEEESSSCBCCCSBC-----
T ss_pred CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC-------------CCcEeeeccCcceeEEEec-----
Confidence 34666677 444444332 122457899999999877642 3678999998765543321
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc---ccceeccceeCC
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK---LDLRFRGVSWCD 226 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~---~~~~~~~~~Ws~ 226 (459)
-...+..+.|+|+++..|+ +...|+- -.||-+.. +.....+.. -......+.|++
T Consensus 249 --------h~~~v~~v~~~p~~~~~~~-s~s~d~~---------v~iwd~~~----~~~~~~~~~~~~h~~~v~~~~~sp 306 (435)
T 4e54_B 249 --------HKKKVTHVALNPCCDWFLA-TASVDQT---------VKIWDLRQ----VRGKASFLYSLPHRHPVNAACFSP 306 (435)
T ss_dssp --------CSSCEEEEEECTTCSSEEE-EEETTSB---------CCEEETTT----CCSSSCCSBCCBCSSCEEECCBCT
T ss_pred --------ccceEEeeeecCCCceEEE-EecCcce---------eeEEeccc----ccccceEEEeeeccccccceeECC
Confidence 1235668999999984443 3332221 12333322 111112211 123356689999
Q ss_pred CCcEEEEEeecCCccEEEEEE
Q 012630 227 DSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 227 D~~al~~~~~~~~~~~~ly~v 247 (459)
|+..|+.... ++..++|-+
T Consensus 307 dg~~l~s~~~--D~~i~iwd~ 325 (435)
T 4e54_B 307 DGARLLTTDQ--KSEIRVYSA 325 (435)
T ss_dssp TSSEEEEEES--SSCEEEEES
T ss_pred CCCeeEEEcC--CCEEEEEEC
Confidence 9877776542 455566654
No 67
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.59 E-value=0.00049 Score=67.93 Aligned_cols=142 Identities=9% Similarity=0.041 Sum_probs=80.6
Q ss_pred hhcceEEEcC-CCcee-ecC---CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccc
Q 012630 73 TTTQLVLATL-DGTVK-EFG---PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPL 147 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~-~l~---~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~ 147 (459)
....+.+++. +|+.. ..+ ....+..++|||||++|+..+.... ....+++|++.......+....+
T Consensus 195 s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~---------~~~~i~~~~~~~~~~~~~~~~~~ 265 (365)
T 4h5i_A 195 TGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG---------KGIVLTKISIKSGNTSVLRSKQV 265 (365)
T ss_dssp CSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS---------CCEEEEEEEEETTEEEEEEEEEE
T ss_pred cceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc---------ceeEEeecccccceecceeeeee
Confidence 3445566665 55433 222 2345678999999999887764311 11245666655433222111111
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-Eecc-ccceeccceeC
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHK-LDLRFRGVSWC 225 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~-~~~~~~~~~Ws 225 (459)
. .-...+..+.|||||+ .|+.. ..| ..|.++++ ..+++. .+.. -......++|+
T Consensus 266 ~--------~~~~~V~~~~~Spdg~-~lasg-s~D-----------~~V~iwd~---~~~~~~~~~~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 266 T--------NRFKGITSMDVDMKGE-LAVLA-SND-----------NSIALVKL---KDLSMSKIFKQAHSFAITEVTIS 321 (365)
T ss_dssp E--------SSCSCEEEEEECTTSC-EEEEE-ETT-----------SCEEEEET---TTTEEEEEETTSSSSCEEEEEEC
T ss_pred c--------CCCCCeEeEEECCCCC-ceEEE-cCC-----------CEEEEEEC---CCCcEEEEecCcccCCEEEEEEC
Confidence 1 1123567899999998 66533 222 24667776 332432 2222 23456779999
Q ss_pred CCCcEEEEEeecCCccEEEEEEcC
Q 012630 226 DDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 226 ~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
|||..|++.. .+...+||.|+.
T Consensus 322 pdg~~laS~S--~D~tvrvw~ip~ 343 (365)
T 4h5i_A 322 PDSTYVASVS--AANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEEE--TTSEEEEEECCT
T ss_pred CCCCEEEEEe--CCCeEEEEEcCC
Confidence 9998888765 357788998854
No 68
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.58 E-value=0.0014 Score=62.87 Aligned_cols=84 Identities=13% Similarity=0.139 Sum_probs=49.3
Q ss_pred hcceEEEcC-CCcee-ecCCCc-------eeeecccCCCCCeEEEEEecc---CcccccccCCCCcceEEEecCCceeee
Q 012630 74 TTQLVLATL-DGTVK-EFGPPA-------IYTAVEPSPDQKYILITSIDR---PYSFTVSYTKFPQKVQVWTADGKFVRQ 141 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~-------~~~~~~~SPDG~~l~~~~~~~---p~s~~v~~~~~~~~~~v~d~~g~~~~~ 141 (459)
..+|+++++ +|+.. .+..+. ....+.|||||++|++..... ...|. .....+++||+++++...
T Consensus 64 ~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~----~~~~~i~~~d~~~~~~~~ 139 (349)
T 1jmx_B 64 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV----VKPPRLEVFSTADGLEAK 139 (349)
T ss_dssp TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEE----ECCCEEEEEEGGGGGGBC
T ss_pred CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccc----cCCCeEEEEECCCccccc
Confidence 467999999 77654 332221 146889999999998886331 11111 113678999987533221
Q ss_pred -eecccccccccccccccccceeeeEEecCCC
Q 012630 142 -LCELPLVENIPIAYNSVREGMRLISWRADRP 172 (459)
Q Consensus 142 -lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~ 172 (459)
+...+ ....+..+.|+|||+
T Consensus 140 ~~~~~~-----------~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 140 PVRTFP-----------MPRQVYLMRAADDGS 160 (349)
T ss_dssp CSEEEE-----------CCSSCCCEEECTTSC
T ss_pred eeeecc-----------CCCcccceeECCCCc
Confidence 11110 112455678999998
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.57 E-value=0.0052 Score=60.13 Aligned_cols=133 Identities=10% Similarity=0.095 Sum_probs=82.9
Q ss_pred cceEEEcC-CCceee-c---CCCceeeecccCC-CCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccc
Q 012630 75 TQLVLATL-DGTVKE-F---GPPAIYTAVEPSP-DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLV 148 (459)
Q Consensus 75 sqL~~v~~-~G~~~~-l---~~~~~~~~~~~SP-DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~ 148 (459)
+.|.++++ +++... + +....+..+.||| ||++|+..+. ...+.+||+.++..+.+....
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-------------d~~i~iwd~~~~~~~~~~~~~-- 160 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI-------------RGATTLRDFSGSVIQVFAKTD-- 160 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET-------------TTEEEEEETTSCEEEEEECCC--
T ss_pred CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC-------------CCEEEEEECCCCceEEEeccC--
Confidence 46677777 554433 2 2455678999999 6777766642 367899999987766654431
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCC
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDS 228 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~ 228 (459)
.....+..+.|+||+. .|+.. .. ...|++++. ++.....+.........+.|++++
T Consensus 161 --------~~~~~v~~~~~~~~~~-~l~~~-~~-----------d~~i~i~d~---~~~~~~~~~~h~~~v~~~~~~~~~ 216 (383)
T 3ei3_B 161 --------SWDYWYCCVDVSVSRQ-MLATG-DS-----------TGRLLLLGL---DGHEIFKEKLHKAKVTHAEFNPRC 216 (383)
T ss_dssp --------CSSCCEEEEEEETTTT-EEEEE-ET-----------TSEEEEEET---TSCEEEEEECSSSCEEEEEECSSC
T ss_pred --------CCCCCeEEEEECCCCC-EEEEE-CC-----------CCCEEEEEC---CCCEEEEeccCCCcEEEEEECCCC
Confidence 1123567899999998 55533 11 235777777 553333443334456779999997
Q ss_pred c-EEEEEeecCCccEEEEEEc
Q 012630 229 L-ALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 229 ~-al~~~~~~~~~~~~ly~v~ 248 (459)
. .|+... .++..++|-+.
T Consensus 217 ~~~l~s~~--~d~~i~iwd~~ 235 (383)
T 3ei3_B 217 DWLMATSS--VDATVKLWDLR 235 (383)
T ss_dssp TTEEEEEE--TTSEEEEEEGG
T ss_pred CCEEEEEe--CCCEEEEEeCC
Confidence 5 555544 24555666554
No 70
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.54 E-value=0.0011 Score=68.75 Aligned_cols=127 Identities=17% Similarity=0.287 Sum_probs=80.4
Q ss_pred cceEEEcCCCc-eeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccccc
Q 012630 75 TQLVLATLDGT-VKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 75 sqL~~v~~~G~-~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P 152 (459)
+.|.+.+++++ .+.+.. ...+..+.|||||++|+..+. ...+.+||.+|+.++.+...
T Consensus 448 ~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~-------------d~~i~iw~~~~~~~~~~~~h------- 507 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD-------------DKTVKLWNRNGQLLQTLTGH------- 507 (577)
T ss_dssp SEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEET-------------TSEEEEEETTSCEEEEEECC-------
T ss_pred CEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC-------------CCEEEEEcCCCCEEEEEeCC-------
Confidence 34556666443 333333 455678999999999987753 36789999988777665432
Q ss_pred ccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEE
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALV 232 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~ 232 (459)
...+..+.|+|||+ .|+-. .. -..|++++. +|.....+..-......+.|++|+..|+
T Consensus 508 ------~~~v~~l~~s~dg~-~l~s~-~~-----------dg~v~lwd~---~~~~~~~~~~h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 508 ------SSSVRGVAFSPDGQ-TIASA-SD-----------DKTVKLWNR---NGQLLQTLTGHSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp ------SSCEEEEEECTTSS-CEEEE-ET-----------TSEEEEECT---TSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred ------CCCEEEEEEcCCCC-EEEEE-EC-----------cCEEEEEeC---CCCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 22456889999999 56532 11 125777787 6523333433344567789999987777
Q ss_pred EEeecCCccEEEE
Q 012630 233 QETWFKTTQTRTW 245 (459)
Q Consensus 233 ~~~~~~~~~~~ly 245 (459)
.... ++..++|
T Consensus 566 s~~~--D~~i~~W 576 (577)
T 2ymu_A 566 SASS--DKTVKLW 576 (577)
T ss_dssp EEET--TSCEEEE
T ss_pred EEeC--CCEEEEe
Confidence 6442 3445555
No 71
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.00054 Score=71.74 Aligned_cols=65 Identities=15% Similarity=0.269 Sum_probs=43.5
Q ss_pred CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEec
Q 012630 90 GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRA 169 (459)
Q Consensus 90 ~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~Wsp 169 (459)
.....+..++|||||++||..+.. ..+.||+.++ .++... ...|+. ..+++.++|||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~d-------------g~V~iwd~~~----~l~~l~--~~~~~~----~~sv~svafSP 139 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNN-------------GNVSVFKDNK----MLTNLD--SKGNLS----SRTYHCFEWNP 139 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETT-------------SCEEEEETTE----EEEECC--CSSCST----TTCEEEEEECS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCC-------------CcEEEEeCCc----eeeecc--CCCccc----cccEEEEEEcC
Confidence 334556899999999999998743 6789999665 222221 111111 23577999999
Q ss_pred CCCceEEEE
Q 012630 170 DRPSTLYWV 178 (459)
Q Consensus 170 Dg~~~l~~~ 178 (459)
||+ .|+-.
T Consensus 140 DG~-~LAsg 147 (588)
T 2j04_A 140 IES-SIVVG 147 (588)
T ss_dssp SSS-CEEEE
T ss_pred CCC-EEEEE
Confidence 999 66643
No 72
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.52 E-value=0.0019 Score=61.26 Aligned_cols=132 Identities=10% Similarity=0.062 Sum_probs=83.1
Q ss_pred hcceEEEcC-CCcee-ecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 74 TTQLVLATL-DGTVK-EFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
.+.|.++++ +++.. .+.. ...+..+.|||||++|+..+. ...+.+||+..+........
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~~~d~~~~~~~~~~~~----- 223 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL-------------DNTVRSWDLREGRQLQQHDF----- 223 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTTEEEEEEEC-----
T ss_pred CCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec-------------CCcEEEEECCCCceEeeecC-----
Confidence 457888888 66543 4443 455689999999999987753 36789999875543322221
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcE
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLA 230 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~a 230 (459)
...+..+.|+||++ .|+... . ...|++++. ..++...+.........+.|++|+..
T Consensus 224 --------~~~v~~~~~s~~~~-~l~~~~-~-----------~~~i~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 224 --------TSQIFSLGYCPTGE-WLAVGM-E-----------SSNVEVLHV---NKPDKYQLHLHESCVLSLKFAYCGKW 279 (337)
T ss_dssp --------SSCEEEEEECTTSS-EEEEEE-T-----------TSCEEEEET---TSSCEEEECCCSSCEEEEEECTTSSE
T ss_pred --------CCceEEEEECCCCC-EEEEEc-C-----------CCcEEEEEC---CCCCeEEEcCCccceeEEEECCCCCE
Confidence 23456889999998 555332 1 124666666 43355555544556777999999876
Q ss_pred EEEEeecCCccEEEEEEcCCC
Q 012630 231 LVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 231 l~~~~~~~~~~~~ly~v~~~~ 251 (459)
|+.... ++..++| +..+
T Consensus 280 l~~~~~--dg~i~~~--~~~~ 296 (337)
T 1gxr_A 280 FVSTGK--DNLLNAW--RTPY 296 (337)
T ss_dssp EEEEET--TSEEEEE--ETTT
T ss_pred EEEecC--CCcEEEE--ECCC
Confidence 665442 3444444 4444
No 73
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.52 E-value=0.0021 Score=63.29 Aligned_cols=135 Identities=11% Similarity=0.027 Sum_probs=74.7
Q ss_pred ceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEe-cCCceeeeeeccccccccc
Q 012630 76 QLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWT-ADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 76 qL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d-~~g~~~~~lt~~p~~~~~P 152 (459)
.|.++|+ +++.. .+.....+.+++|||||++|+..+. ..+.+|+ ..|..+...+...
T Consensus 158 ~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~--------------~~~~~~~~~~~~~~~~~~~~~------ 217 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITG--------------SSLEVISTVTGSCIARKTDFD------ 217 (365)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECS--------------SCEEEEETTTCCEEEEECCCC------
T ss_pred EEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccc--------------eeEEEEEeccCcceeeeecCC------
Confidence 4667777 66433 4444556789999999999987752 2345565 4455544333211
Q ss_pred ccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-----eEeccccceeccceeCCC
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-----EILHKLDLRFRGVSWCDD 227 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-----~~L~~~~~~~~~~~Ws~D 227 (459)
-...++.+.|+|||. .++... .+++. .-.++.++. ..+.. +.+......+..++|+||
T Consensus 218 -----~~~~v~~v~fspdg~-~l~~~s-~d~~~-------~~~i~~~~~---~~~~~~~~~~~~~~~~~~~V~~~~~Spd 280 (365)
T 4h5i_A 218 -----KNWSLSKINFIADDT-VLIAAS-LKKGK-------GIVLTKISI---KSGNTSVLRSKQVTNRFKGITSMDVDMK 280 (365)
T ss_dssp -----TTEEEEEEEEEETTE-EEEEEE-ESSSC-------CEEEEEEEE---ETTEEEEEEEEEEESSCSCEEEEEECTT
T ss_pred -----CCCCEEEEEEcCCCC-EEEEEe-cCCcc-------eeEEeeccc---ccceecceeeeeecCCCCCeEeEEECCC
Confidence 123457889999998 555432 22221 113444443 11121 122222333566899999
Q ss_pred CcEEEEEeecCCccEEEEEEcCCC
Q 012630 228 SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 228 ~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
|..|+.... ++..+|| +..+
T Consensus 281 g~~lasgs~--D~~V~iw--d~~~ 300 (365)
T 4h5i_A 281 GELAVLASN--DNSIALV--KLKD 300 (365)
T ss_dssp SCEEEEEET--TSCEEEE--ETTT
T ss_pred CCceEEEcC--CCEEEEE--ECCC
Confidence 977776542 3445555 5544
No 74
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.47 E-value=0.0026 Score=62.37 Aligned_cols=65 Identities=12% Similarity=0.100 Sum_probs=41.8
Q ss_pred ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEecCC
Q 012630 93 AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 93 ~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
.....+.|||||++|++.. . ....+++|+++ .++...+..... | .-..+++.+.|+|||
T Consensus 145 ~~~~~~~~spdG~~l~~~~-~-----------~~~~v~~~~~~~~g~~~~~~~~~~----~----~~g~~p~~~~~spdg 204 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSAD-L-----------TANKLWTHRKLASGEVELVGSVDA----P----DPGDHPRWVAMHPTG 204 (365)
T ss_dssp CCEEEEEECTTSSEEEEEE-T-----------TTTEEEEEEECTTSCEEEEEEEEC----S----STTCCEEEEEECTTS
T ss_pred CcceEEEECCCCCEEEEEc-C-----------CCCEEEEEEECCCCCEEEeeeEec----C----CCCCCCCEeEECCCC
Confidence 4457899999999986553 2 23578999986 454443332211 0 002367899999999
Q ss_pred CceEEEE
Q 012630 172 PSTLYWV 178 (459)
Q Consensus 172 ~~~l~~~ 178 (459)
+ .|+.+
T Consensus 205 ~-~l~v~ 210 (365)
T 1jof_A 205 N-YLYAL 210 (365)
T ss_dssp S-EEEEE
T ss_pred C-EEEEE
Confidence 9 66644
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.44 E-value=0.021 Score=61.62 Aligned_cols=128 Identities=12% Similarity=0.146 Sum_probs=74.0
Q ss_pred ceEEEcC-CCc-eeecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeecccccccc
Q 012630 76 QLVLATL-DGT-VKEFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENI 151 (459)
Q Consensus 76 qL~~v~~-~G~-~~~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~ 151 (459)
.|.++++ +|+ ...+. ....+..+.|||||++|++.+. ...+.|||+. |+.+..+...
T Consensus 36 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~i~vw~~~~~~~~~~~~~~------ 96 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-------------DFRIRVFNYNTGEKVVDFEAH------ 96 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-------------TSEEEEEETTTCCEEEEEECC------
T ss_pred EEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-------------CCeEEEEECCCCcEEEEEecC------
Confidence 3444554 443 33333 3455689999999999988863 3678999976 4444444321
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCC-Cc-eEeccccceeccceeCC-CC
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE-EP-EILHKLDLRFRGVSWCD-DS 228 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~-~~-~~L~~~~~~~~~~~Ws~-D~ 228 (459)
...++.+.|+||++ .|+.. ..| ..|.+++. ..+ .. ..+.........+.|+| |+
T Consensus 97 -------~~~v~~~~~s~~~~-~l~~~-~~d-----------g~i~vw~~---~~~~~~~~~~~~~~~~v~~~~~~p~~~ 153 (814)
T 3mkq_A 97 -------PDYIRSIAVHPTKP-YVLSG-SDD-----------LTVKLWNW---ENNWALEQTFEGHEHFVMCVAFNPKDP 153 (814)
T ss_dssp -------SSCEEEEEECSSSS-EEEEE-ETT-----------SEEEEEEG---GGTSEEEEEEECCSSCEEEEEEETTEE
T ss_pred -------CCCEEEEEEeCCCC-EEEEE-cCC-----------CEEEEEEC---CCCceEEEEEcCCCCcEEEEEEEcCCC
Confidence 23567899999999 55533 211 23444444 221 22 23333344567789999 66
Q ss_pred cEEEEEeecCCccEEEEEE
Q 012630 229 LALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v 247 (459)
..|+.... ++..++|-+
T Consensus 154 ~~l~~~~~--dg~v~vwd~ 170 (814)
T 3mkq_A 154 STFASGCL--DRTVKVWSL 170 (814)
T ss_dssp EEEEEEET--TSEEEEEET
T ss_pred CEEEEEeC--CCeEEEEEC
Confidence 56665442 344444443
No 76
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.39 E-value=0.013 Score=61.61 Aligned_cols=77 Identities=13% Similarity=0.011 Sum_probs=51.9
Q ss_pred hcceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC---Cceeeeeeccccc
Q 012630 74 TTQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD---GKFVRQLCELPLV 148 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~---g~~~~~lt~~p~~ 148 (459)
..+|+++|+ ++++. .+..+.....+.+||||++|++.. + ...+.++|+. +..+..|..
T Consensus 176 ~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~-~------------dg~V~viD~~~~t~~~v~~i~~---- 238 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIG-R------------DGKVNMIDLWMKEPTTVAEIKI---- 238 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEE-T------------TSEEEEEETTSSSCCEEEEEEC----
T ss_pred CCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEc-C------------CCeEEEEECCCCCCcEeEEEec----
Confidence 468999998 77655 454444456899999999987664 1 2468999983 433433321
Q ss_pred ccccccccccccceeeeEEe----cCCCceEEEE
Q 012630 149 ENIPIAYNSVREGMRLISWR----ADRPSTLYWV 178 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~Ws----pDg~~~l~~~ 178 (459)
..+++.+.+| |||+ .|+..
T Consensus 239 ----------G~~P~~ia~s~~~~pDGk-~l~v~ 261 (567)
T 1qks_A 239 ----------GSEARSIETSKMEGWEDK-YAIAG 261 (567)
T ss_dssp ----------CSEEEEEEECCSTTCTTT-EEEEE
T ss_pred ----------CCCCceeEEccccCCCCC-EEEEE
Confidence 2367899999 7999 55544
No 77
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.37 E-value=0.033 Score=54.26 Aligned_cols=133 Identities=11% Similarity=0.096 Sum_probs=74.0
Q ss_pred cceEEEcC-CCcee-e-----cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccc
Q 012630 75 TQLVLATL-DGTVK-E-----FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELP 146 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~-----l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p 146 (459)
+.|.+.|+ +|+.. . .+..+.+..++|||||++|+..+. ...+.+||+..+. ++.+..
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~-------------d~~i~iwd~~~~~~~~~~~~-- 167 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK-------------DICIKVWDLAQQVVLSSYRA-- 167 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTTEEEEEECC--
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC-------------CCeEEEEECCCCcEEEEEcC--
Confidence 45666666 55422 1 133456789999999999977753 3678999987544 333321
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-Eecc--ccceeccce
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHK--LDLRFRGVS 223 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~--~~~~~~~~~ 223 (459)
-...+..+.|+|++...|+ ....|+ .|.+++. ..++.. .+.. .......+.
T Consensus 168 -----------h~~~V~~~~~~~~~~~~l~-s~s~D~-----------~v~iwd~---~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 168 -----------HAAQVTCVAASPHKDSVFL-SCSEDN-----------RILLWDT---RCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp -----------CSSCEEEEEECSSCTTEEE-EEETTS-----------CEEEEET---TSSSCEEECC----CCCEEEEE
T ss_pred -----------cCCceEEEEecCCCCCcee-eecccc-----------ccccccc---cccceeeeeecceeeccceeee
Confidence 1235568899999984444 332222 3555665 322433 3321 122245688
Q ss_pred eCCC-CcEEEEEeecCCccEEEEEEcCCCC
Q 012630 224 WCDD-SLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 224 Ws~D-~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
|+++ +..|+... .++..++| |+.++
T Consensus 222 ~~p~~~~~l~sg~--~dg~v~~w--d~~~~ 247 (344)
T 4gqb_B 222 WHPQQSEVFVFGD--ENGTVSLV--DTKST 247 (344)
T ss_dssp ECSSCTTEEEEEE--TTSEEEEE--ESCC-
T ss_pred ecCCCCcceEEec--cCCcEEEE--ECCCC
Confidence 9986 45565443 23444444 55543
No 78
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.32 E-value=0.0041 Score=60.01 Aligned_cols=129 Identities=15% Similarity=0.233 Sum_probs=76.2
Q ss_pred cceEEEcC-CCcee-ecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccccccc
Q 012630 75 TQLVLATL-DGTVK-EFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p~~~~ 150 (459)
+.+.++++ +++.. .+.. ...+..++|||||++|+..+. ...+.+||+..+. +..+...
T Consensus 144 g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~-------------dg~i~iwd~~~~~~~~~~~~h----- 205 (321)
T 3ow8_A 144 GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI-------------DGIINIFDIATGKLLHTLEGH----- 205 (321)
T ss_dssp SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTTEEEEEECCC-----
T ss_pred CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC-------------CCeEEEEECCCCcEEEEEccc-----
Confidence 45556666 44332 3332 345678999999999987753 3678999987443 3333221
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-eEeccccceeccceeCCCCc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-EILHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-~~L~~~~~~~~~~~Ws~D~~ 229 (459)
...++.+.|+||++ .|+.. ..| ..|.+++. ..++. ..+..-......+.|+||+.
T Consensus 206 --------~~~v~~l~~spd~~-~l~s~-s~d-----------g~i~iwd~---~~~~~~~~~~~h~~~v~~~~~sp~~~ 261 (321)
T 3ow8_A 206 --------AMPIRSLTFSPDSQ-LLVTA-SDD-----------GYIKIYDV---QHANLAGTLSGHASWVLNVAFCPDDT 261 (321)
T ss_dssp --------SSCCCEEEECTTSC-EEEEE-CTT-----------SCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred --------CCceeEEEEcCCCC-EEEEE-cCC-----------CeEEEEEC---CCcceeEEEcCCCCceEEEEECCCCC
Confidence 22456899999998 55522 211 23556665 32232 23332333466789999987
Q ss_pred EEEEEeecCCccEEEEEE
Q 012630 230 ALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v 247 (459)
.|+.... ++..++|-+
T Consensus 262 ~l~s~s~--D~~v~iwd~ 277 (321)
T 3ow8_A 262 HFVSSSS--DKSVKVWDV 277 (321)
T ss_dssp EEEEEET--TSCEEEEET
T ss_pred EEEEEeC--CCcEEEEeC
Confidence 7776542 455666654
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.32 E-value=0.15 Score=50.18 Aligned_cols=133 Identities=14% Similarity=0.240 Sum_probs=77.5
Q ss_pred hhcceEEEcC-CCceeecC---CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeecccc
Q 012630 73 TTTQLVLATL-DGTVKEFG---PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPL 147 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~---~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~ 147 (459)
..+.|.++++ +|+...+. ....+..++|||||++|++.+. ...+.+||+.. ..++.+...
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~-------------dg~i~iwd~~~~~~~~~~~~~-- 175 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG-------------NGLVDIYDVESQTKLRTMAGH-- 175 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTCCEEEEECCC--
T ss_pred CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC-------------CCeEEEEECcCCeEEEEecCC--
Confidence 4567888888 77655433 2455789999999999988763 36789999764 444444321
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCC
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDD 227 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D 227 (459)
...+..+.|.+ . .|+.. .. ...|++++. .-.+.....+.........+.|++|
T Consensus 176 -----------~~~v~~~~~~~--~-~l~~~-~~-----------dg~i~i~d~-~~~~~~~~~~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 176 -----------QARVGCLSWNR--H-VLSSG-SR-----------SGAIHHHDV-RIANHQIGTLQGHSSEVCGLAWRSD 228 (401)
T ss_dssp -----------SSCEEEEEEET--T-EEEEE-ET-----------TSEEEEEET-TSSSCEEEEEECCSSCEEEEEECTT
T ss_pred -----------CCceEEEEECC--C-EEEEE-cC-----------CCCEEEEec-ccCcceeeEEcCCCCCeeEEEEcCC
Confidence 23456788843 3 44432 21 124556665 1022122333333445677899999
Q ss_pred CcEEEEEeecCCccEEEEEEcCCC
Q 012630 228 SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 228 ~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
+..|+.... ++..++| +..+
T Consensus 229 ~~~l~s~~~--d~~v~iw--d~~~ 248 (401)
T 4aez_A 229 GLQLASGGN--DNVVQIW--DARS 248 (401)
T ss_dssp SSEEEEEET--TSCEEEE--ETTC
T ss_pred CCEEEEEeC--CCeEEEc--cCCC
Confidence 866665442 3444444 5443
No 80
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.30 E-value=0.0033 Score=65.10 Aligned_cols=127 Identities=17% Similarity=0.300 Sum_probs=80.3
Q ss_pred ceEEEcCCCc-eeecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccc
Q 012630 76 QLVLATLDGT-VKEFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPI 153 (459)
Q Consensus 76 qL~~v~~~G~-~~~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~ 153 (459)
.|.+.+.+|+ .+.+. ....+..+.|||||++|+..+. ...+.+||++++..+.+...
T Consensus 408 ~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-------------d~~v~~w~~~~~~~~~~~~~-------- 466 (577)
T 2ymu_A 408 TVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASD-------------DKTVKLWNRNGQLLQTLTGH-------- 466 (577)
T ss_dssp EEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTSCEEEEEECC--------
T ss_pred EEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcC-------------CCEEEEEECCCCEEEEEcCC--------
Confidence 4555666443 23333 2445678999999999987753 36688999988777665432
Q ss_pred cccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEEE
Q 012630 154 AYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQ 233 (459)
Q Consensus 154 ~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~~ 233 (459)
...+..+.|+|||+ .|+... . ...|++++. +|...+.+..-......+.|+||+..|+.
T Consensus 467 -----~~~v~~~~~spd~~-~las~~-~-----------d~~i~iw~~---~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 525 (577)
T 2ymu_A 467 -----SSSVRGVAFSPDGQ-TIASAS-D-----------DKTVKLWNR---NGQLLQTLTGHSSSVRGVAFSPDGQTIAS 525 (577)
T ss_dssp -----SSCEEEEEECTTSC-EEEEEE-T-----------TSEEEEEET---TSCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred -----CCCEEEEEEcCCCC-EEEEEe-C-----------CCEEEEEcC---CCCEEEEEeCCCCCEEEEEEcCCCCEEEE
Confidence 23456889999998 665331 1 124666777 66333444433445677899999877765
Q ss_pred EeecCCccEEEEE
Q 012630 234 ETWFKTTQTRTWL 246 (459)
Q Consensus 234 ~~~~~~~~~~ly~ 246 (459)
.. .++..++|-
T Consensus 526 ~~--~dg~v~lwd 536 (577)
T 2ymu_A 526 AS--DDKTVKLWN 536 (577)
T ss_dssp EE--TTSEEEEEC
T ss_pred EE--CcCEEEEEe
Confidence 44 244455553
No 81
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.1 Score=50.77 Aligned_cols=60 Identities=17% Similarity=0.264 Sum_probs=44.0
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
...+..++|||||++|+.... ...+.+||.+|..+..+... ...+..+.|+||+
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~-------------dg~i~i~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~ 161 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVE-------------NGELRLWNKTGALLNVLNFH-------------RAPIVSVKWNKDG 161 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEET-------------TSCEEEEETTSCEEEEECCC-------------CSCEEEEEECTTS
T ss_pred CCceEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCCeeeeccCC-------------CccEEEEEECCCC
Confidence 335689999999999988753 36789999877777666432 2356689999999
Q ss_pred CceEEEE
Q 012630 172 PSTLYWV 178 (459)
Q Consensus 172 ~~~l~~~ 178 (459)
. .|+..
T Consensus 162 ~-~l~~~ 167 (425)
T 1r5m_A 162 T-HIISM 167 (425)
T ss_dssp S-EEEEE
T ss_pred C-EEEEE
Confidence 8 55533
No 82
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.25 E-value=0.046 Score=56.52 Aligned_cols=135 Identities=17% Similarity=0.158 Sum_probs=80.4
Q ss_pred hcceEEEcC-CC-----ceeecCC-Cce-eeecccCC--CCCeEEEEEeccCcccccccCCCCcceEEEecCCc------
Q 012630 74 TTQLVLATL-DG-----TVKEFGP-PAI-YTAVEPSP--DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK------ 137 (459)
Q Consensus 74 ~sqL~~v~~-~G-----~~~~l~~-~~~-~~~~~~SP--DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~------ 137 (459)
.+.+.++++ +| ....+.. ... +..++||| ||++|+..+. ...+.|||+..+
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~-------------dg~v~vw~~~~~~~~~~~ 104 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE-------------SGKVIVWGWTFDKESNSV 104 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET-------------TSEEEEEEEEEEGGGTEE
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC-------------CCEEEEEeCCCCcccccc
Confidence 456777887 66 3444543 455 78999999 9999987753 367899998532
Q ss_pred eeeeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc
Q 012630 138 FVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL 217 (459)
Q Consensus 138 ~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~ 217 (459)
....+.... .....+..+.|+|||+ .|+.... +. .....|+.++. +.....+.....
T Consensus 105 ~~~~~~~~~----------~~~~~v~~~~~s~~~~-~l~~~~~-~~-------~~~~~v~~~d~----~~~~~~~~~~~~ 161 (615)
T 1pgu_A 105 EVNVKSEFQ----------VLAGPISDISWDFEGR-RLCVVGE-GR-------DNFGVFISWDS----GNSLGEVSGHSQ 161 (615)
T ss_dssp EEEEEEEEE----------CCSSCEEEEEECTTSS-EEEEEEC-CS-------SCSEEEEETTT----CCEEEECCSCSS
T ss_pred cccccchhh----------cccccEEEEEEeCCCC-EEEEecc-CC-------CCccEEEEEEC----CCcceeeecCCc
Confidence 222222211 1234577899999999 6664431 11 11246777776 323334443444
Q ss_pred eeccceeCCCCc-EEEEEeecCCccEEEEE
Q 012630 218 RFRGVSWCDDSL-ALVQETWFKTTQTRTWL 246 (459)
Q Consensus 218 ~~~~~~Ws~D~~-al~~~~~~~~~~~~ly~ 246 (459)
....+.|++++. .|+... .++..++|-
T Consensus 162 ~v~~~~~~~~~~~~l~~~~--~d~~v~vwd 189 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVG--DDGSVVFYQ 189 (615)
T ss_dssp CEEEEEECSSSSCEEEEEE--TTTEEEEEE
T ss_pred cEEEEEECCCCCcEEEEEe--CCCcEEEEe
Confidence 567789999874 455433 234455554
No 83
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.25 E-value=0.018 Score=57.10 Aligned_cols=136 Identities=10% Similarity=-0.002 Sum_probs=73.6
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceE
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTL 175 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l 175 (459)
..+.+++||..++|++. ...++++|+.+...+.+...++...........+.+.+.+..+||++ +|
T Consensus 216 ~~~~~~~~~~~~~~~~~-------------~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~-~l 281 (373)
T 2mad_H 216 TQPAQANKSGRIVWPVY-------------SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD-GI 281 (373)
T ss_pred ecceeEecCCEEEEEcC-------------CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCC-EE
Confidence 34677888888877752 25788999876655444433221111111111223344567788877 55
Q ss_pred EEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCc-EEEEEeecCCccEEEEEEcCCCCC
Q 012630 176 YWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSL-ALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 176 ~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~-al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
|.... .+... ......+.|+++|+ ..++...-........++.|++||. .++...+. ...|++||+++++
T Consensus 282 yV~~~-~~~~~-~~~~~~~~V~VID~---~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~---~~~V~ViD~~t~~ 352 (373)
T 2mad_H 282 YLLTS-EQSAW-KLHAAAKEVTSVTG---LVGQTSSQISLGHDVDAISVAQDGGPDLYALSAG---TEVLHIYDAGAGD 352 (373)
T ss_pred EEEec-cCCcc-cccCCCCeEEEEEC---CCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCC---CCeEEEEECCCCC
Confidence 54322 11110 00011357999998 4334432223444567799999986 44443321 2469999988654
No 84
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.22 E-value=0.0047 Score=59.53 Aligned_cols=130 Identities=8% Similarity=0.108 Sum_probs=78.7
Q ss_pred hcceEEEcC-CCcee-ecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeecccccc
Q 012630 74 TTQLVLATL-DGTVK-EFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPLVE 149 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~~~ 149 (459)
.+.|.++|+ +|+.. .+.. ...+..+.|||||++|+..+. ...+.+||+..+ ....+..
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~-------------dg~i~iwd~~~~~~~~~~~~----- 246 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-------------DGYIKIYDVQHANLAGTLSG----- 246 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECT-------------TSCEEEEETTTCCEEEEECC-----
T ss_pred CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcC-------------CCeEEEEECCCcceeEEEcC-----
Confidence 346777787 66543 3443 345678999999999877642 367899998643 3333322
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-eEeccccceeccceeCCCC
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-EILHKLDLRFRGVSWCDDS 228 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-~~L~~~~~~~~~~~Ws~D~ 228 (459)
-...+..+.|+||++ .|+-. ..| ..|.+++. ..++. ..+..-......+.|++|+
T Consensus 247 --------h~~~v~~~~~sp~~~-~l~s~-s~D-----------~~v~iwd~---~~~~~~~~~~~h~~~v~~v~~s~~g 302 (321)
T 3ow8_A 247 --------HASWVLNVAFCPDDT-HFVSS-SSD-----------KSVKVWDV---GTRTCVHTFFDHQDQVWGVKYNGNG 302 (321)
T ss_dssp --------CSSCEEEEEECTTSS-EEEEE-ETT-----------SCEEEEET---TTTEEEEEECCCSSCEEEEEECTTS
T ss_pred --------CCCceEEEEECCCCC-EEEEE-eCC-----------CcEEEEeC---CCCEEEEEEcCCCCcEEEEEECCCC
Confidence 123456889999998 55532 222 23556665 22232 2232233446678999998
Q ss_pred cEEEEEeecCCccEEEEEE
Q 012630 229 LALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v 247 (459)
..|+... .++..++|-+
T Consensus 303 ~~l~s~~--~d~~i~vwd~ 319 (321)
T 3ow8_A 303 SKIVSVG--DDQEIHIYDC 319 (321)
T ss_dssp SEEEEEE--TTCCEEEEEC
T ss_pred CEEEEEe--CCCeEEEEeC
Confidence 7777654 3566677754
No 85
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.17 E-value=0.0048 Score=59.73 Aligned_cols=140 Identities=13% Similarity=0.063 Sum_probs=83.8
Q ss_pred hhcceEEEcC-CCceeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 73 TTTQLVLATL-DGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
...+|++++. +|+.+.+..+.....+.|+|||+.++.. . ..++++|.+++..+.+...+. ..
T Consensus 69 ~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~-~--------------~gl~~~d~~~g~~~~~~~~~~--~~ 131 (326)
T 2ghs_A 69 LERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS-D--------------DGLFLRDTATGVLTLHAELES--DL 131 (326)
T ss_dssp GGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE-T--------------TEEEEEETTTCCEEEEECSST--TC
T ss_pred CCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE-C--------------CCEEEEECCCCcEEEEeeCCC--CC
Confidence 3468999998 7777766656666789999999876543 1 248899987776666654321 00
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLAL 231 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al 231 (459)
+ ...+..+.|+|||. +++....+..+ .....||.++. | +.+.+........++.|++|+..+
T Consensus 132 ~------~~~~~~i~~d~~G~--l~v~~~~~~~~-----~~~~~l~~~~~----g-~~~~~~~~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 132 P------GNRSNDGRMHPSGA--LWIGTMGRKAE-----TGAGSIYHVAK----G-KVTKLFADISIPNSICFSPDGTTG 193 (326)
T ss_dssp T------TEEEEEEEECTTSC--EEEEEEETTCC-----TTCEEEEEEET----T-EEEEEEEEESSEEEEEECTTSCEE
T ss_pred C------CCCCCCEEECCCCC--EEEEeCCCcCC-----CCceEEEEEeC----C-cEEEeeCCCcccCCeEEcCCCCEE
Confidence 1 12466889999987 33332211100 12346887753 3 555554322234568999998544
Q ss_pred EEEeecCCccEEEEEEcCC
Q 012630 232 VQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 232 ~~~~~~~~~~~~ly~v~~~ 250 (459)
+... .....||+++.+
T Consensus 194 yv~~---~~~~~I~~~d~~ 209 (326)
T 2ghs_A 194 YFVD---TKVNRLMRVPLD 209 (326)
T ss_dssp EEEE---TTTCEEEEEEBC
T ss_pred EEEE---CCCCEEEEEEcc
Confidence 4332 122457777764
No 86
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.15 E-value=0.022 Score=53.69 Aligned_cols=146 Identities=11% Similarity=0.047 Sum_probs=82.1
Q ss_pred hhcceEEEcC-CCceeecCCC-ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 73 TTTQLVLATL-DGTVKEFGPP-AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~~-~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
...+|++++. ++ .+.+..+ .....+.++|||+.+ +... ....+++||...+..+.+.... ..
T Consensus 48 ~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~-v~~~------------~~~~i~~~d~~~g~~~~~~~~~--~~ 111 (296)
T 3e5z_A 48 RQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLI-ACSH------------GLRRLERQREPGGEWESIADSF--EG 111 (296)
T ss_dssp GGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEE-EEET------------TTTEEEEECSTTCCEEEEECEE--TT
T ss_pred CCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEE-EEec------------CCCeEEEEcCCCCcEEEEeecc--CC
Confidence 4467888888 55 6666543 345689999999854 3321 1256889998544444443311 00
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCc--c---cccc-CCCCeEEeccCCCCCCCCceEeccccceecccee
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGA--A---KVEV-SPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSW 224 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~--~---~~~~-~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~W 224 (459)
.....+..+.++|||. |+++....+.. . .... .....||.++. .| +.+.+........+++|
T Consensus 112 ------~~~~~~~~i~~d~~G~--l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~---~g-~~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 112 ------KKLNSPNDVCLAPDGS--LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP---DG-TLSAPIRDRVKPNGLAF 179 (296)
T ss_dssp ------EECCCCCCEEECTTSC--EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT---TS-CEEEEECCCSSEEEEEE
T ss_pred ------CCCCCCCCEEECCCCC--EEEECCccccccccccccccccCCCcEEEEECC---CC-CEEEeecCCCCCccEEE
Confidence 0112456789999987 44432110100 0 0000 11347999988 54 66666544334567899
Q ss_pred CCCCcEEEEEeecCCccEEEEEEcCC
Q 012630 225 CDDSLALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 225 s~D~~al~~~~~~~~~~~~ly~v~~~ 250 (459)
++|+..|+.+. ....++++++.
T Consensus 180 s~dg~~lv~~~----~~~~i~~~~~~ 201 (296)
T 3e5z_A 180 LPSGNLLVSDT----GDNATHRYCLN 201 (296)
T ss_dssp CTTSCEEEEET----TTTEEEEEEEC
T ss_pred CCCCCEEEEeC----CCCeEEEEEEC
Confidence 99986665433 22246666654
No 87
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.15 E-value=0.0052 Score=60.17 Aligned_cols=134 Identities=11% Similarity=0.070 Sum_probs=78.2
Q ss_pred cceEEEcC-CCceee-cC---CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeeccccc
Q 012630 75 TQLVLATL-DGTVKE-FG---PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPLV 148 (459)
Q Consensus 75 sqL~~v~~-~G~~~~-l~---~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~~ 148 (459)
+.|.+.|+ +++... +. ....+..++||||+..++++.. ....+.+||+..+ .++.+..
T Consensus 204 g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~------------~d~~i~~wd~~~~~~~~~~~~---- 267 (357)
T 4g56_B 204 GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD------------ETGNVSLVNIKNPDSAQTSAV---- 267 (357)
T ss_dssp SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE------------SSSCEEEEESSCGGGCEEECC----
T ss_pred CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee------------cccceeEEECCCCcEeEEEec----
Confidence 45666676 554332 22 2344578999999776655532 1356889997643 3333221
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCC-C
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCD-D 227 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~-D 227 (459)
-...+..+.|+||+...|+ +...| ..|+++++ ..++......-......++|+| |
T Consensus 268 ---------~~~~v~~l~~sp~~~~~la-sgs~D-----------~~i~iwd~---~~~~~~~~~~H~~~V~~vafsP~d 323 (357)
T 4g56_B 268 ---------HSQNITGLAYSYHSSPFLA-SISED-----------CTVAVLDA---DFSEVFRDLSHRDFVTGVAWSPLD 323 (357)
T ss_dssp ---------CSSCEEEEEECSSSSCCEE-EEETT-----------SCEEEECT---TSCEEEEECCCSSCEEEEEECSSS
T ss_pred ---------cceeEEEEEEcCCCCCEEE-EEeCC-----------CEEEEEEC---CCCcEeEECCCCCCEEEEEEeCCC
Confidence 1235678999999874454 22222 24677777 4334443333233466789998 7
Q ss_pred CcEEEEEeecCCccEEEEEEcCC
Q 012630 228 SLALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 228 ~~al~~~~~~~~~~~~ly~v~~~ 250 (459)
+..|+...+ ++..++|.++..
T Consensus 324 ~~~l~s~s~--Dg~v~iW~~~~~ 344 (357)
T 4g56_B 324 HSKFTTVGW--DHKVLHHHLPSE 344 (357)
T ss_dssp TTEEEEEET--TSCEEEEECC--
T ss_pred CCEEEEEcC--CCeEEEEECCCC
Confidence 777776552 567788887643
No 88
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.10 E-value=0.012 Score=58.99 Aligned_cols=134 Identities=10% Similarity=0.083 Sum_probs=78.3
Q ss_pred hcceEEEcC-CCceee-c---CCCceeeecccCC-CCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccc
Q 012630 74 TTQLVLATL-DGTVKE-F---GPPAIYTAVEPSP-DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPL 147 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~-l---~~~~~~~~~~~SP-DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~ 147 (459)
.+.|.++++ +++... + +..+.+..++||| ||++|+-.+ ....+.+||+.++..+.+....
T Consensus 141 dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-------------~D~~v~iwd~~~~~~~~~~~~~- 206 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-------------MEGTTRLQDFKGNILRVFASSD- 206 (435)
T ss_dssp TSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC-------------SSSCEEEEETTSCEEEEEECCS-
T ss_pred CCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe-------------CCCEEEEeeccCCceeEEeccC-
Confidence 356777777 443222 2 2345678999999 677775553 2367899999987766554421
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCC
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDD 227 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D 227 (459)
........+.|+||+. .|+.. .. ...|++++. .+.....+..-...+..+.|+|+
T Consensus 207 ---------~~~~~~~~~~~~~~~~-~l~~g-~~-----------dg~i~~wd~---~~~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 207 ---------TINIWFCSLDVSASSR-MVVTG-DN-----------VGNVILLNM---DGKELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp ---------SCSCCCCCEEEETTTT-EEEEE-CS-----------SSBEEEEES---SSCBCCCSBCCSSCEEEEEECTT
T ss_pred ---------CCCccEEEEEECCCCC-EEEEE-eC-----------CCcEeeecc---CcceeEEEecccceEEeeeecCC
Confidence 1122345789999988 55422 11 235677777 55333333333445677899998
Q ss_pred Cc-EEEEEeecCCccEEEEEEc
Q 012630 228 SL-ALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 228 ~~-al~~~~~~~~~~~~ly~v~ 248 (459)
+. .|+... .++..++|-+.
T Consensus 262 ~~~~~~s~s--~d~~v~iwd~~ 281 (435)
T 4e54_B 262 CDWFLATAS--VDQTVKIWDLR 281 (435)
T ss_dssp CSSEEEEEE--TTSBCCEEETT
T ss_pred CceEEEEec--CcceeeEEecc
Confidence 63 444433 24555666553
No 89
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.10 E-value=0.0098 Score=58.67 Aligned_cols=77 Identities=13% Similarity=0.144 Sum_probs=53.5
Q ss_pred hcceEEEcC-CCceeec--CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeecccccc
Q 012630 74 TTQLVLATL-DGTVKEF--GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVE 149 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l--~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~ 149 (459)
.+.|.++++ +++.... .....+..+.|||||++|+..+. ...+.+||+. +..++.+..
T Consensus 118 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-------------d~~i~iwd~~~~~~~~~~~~----- 179 (420)
T 3vl1_A 118 EGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ-------------DMQLKIWSVKDGSNPRTLIG----- 179 (420)
T ss_dssp TSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTCCCCEEEEC-----
T ss_pred CCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC-------------CCeEEEEeCCCCcCceEEcC-----
Confidence 357888888 6766554 33566789999999998877753 3678999986 444444432
Q ss_pred cccccccccccceeeeEEecCCCceEEE
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYW 177 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~ 177 (459)
-...+..+.|+||+. .|+.
T Consensus 180 --------h~~~v~~~~~~~~~~-~l~s 198 (420)
T 3vl1_A 180 --------HRATVTDIAIIDRGR-NVLS 198 (420)
T ss_dssp --------CSSCEEEEEEETTTT-EEEE
T ss_pred --------CCCcEEEEEEcCCCC-EEEE
Confidence 123567899999988 5653
No 90
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.07 E-value=0.009 Score=58.37 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=78.0
Q ss_pred cceEEEcC-CCce-eecCC---CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeeccccc
Q 012630 75 TQLVLATL-DGTV-KEFGP---PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLV 148 (459)
Q Consensus 75 sqL~~v~~-~G~~-~~l~~---~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~ 148 (459)
+.|.+.|+ +++. ..+.. ......+.|+|++..++++.. ....+.|||+.. +.++.+..
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~------------~dg~v~~wd~~~~~~~~~~~~---- 255 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD------------ENGTVSLVDTKSTSCVLSSAV---- 255 (344)
T ss_dssp SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE------------TTSEEEEEESCC--CCEEEEC----
T ss_pred cccccccccccceeeeeecceeeccceeeeecCCCCcceEEec------------cCCcEEEEECCCCcEEEEEcC----
Confidence 45777787 6643 34432 234568999998766655532 136789999864 33443322
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCC
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDS 228 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~ 228 (459)
-...+..+.|+|||...|+ +...| ..|++++. ..++...+..-......++|+||+
T Consensus 256 ---------h~~~v~~v~fsp~g~~~la-sgs~D-----------~~i~vwd~---~~~~~~~~~~H~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 256 ---------HSQCVTGLVFSPHSVPFLA-SLSED-----------CSLAVLDS---SLSELFRSQAHRDFVRDATWSPLN 311 (344)
T ss_dssp ---------CSSCEEEEEECSSSSCCEE-EEETT-----------SCEEEECT---TCCEEEEECCCSSCEEEEEECSSS
T ss_pred ---------CCCCEEEEEEccCCCeEEE-EEeCC-----------CeEEEEEC---CCCcEEEEcCCCCCEEEEEEeCCC
Confidence 1235678999999974444 32222 24667777 443444333223346678999987
Q ss_pred c-EEEEEeecCCccEEEEEEcC
Q 012630 229 L-ALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 229 ~-al~~~~~~~~~~~~ly~v~~ 249 (459)
. .|+...+ ++..++|.++.
T Consensus 312 ~~llas~s~--D~~v~~w~v~~ 331 (344)
T 4gqb_B 312 HSLLTTVGW--DHQVVHHVVPT 331 (344)
T ss_dssp TTEEEEEET--TSCEEEEECCC
T ss_pred CeEEEEEcC--CCeEEEEECCC
Confidence 4 4444332 56678888764
No 91
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.07 E-value=0.011 Score=58.39 Aligned_cols=136 Identities=11% Similarity=0.113 Sum_probs=82.6
Q ss_pred hcceEEEcC--CCc-eeecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeeccccc
Q 012630 74 TTQLVLATL--DGT-VKEFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPLV 148 (459)
Q Consensus 74 ~sqL~~v~~--~G~-~~~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~~ 148 (459)
.+.|.++++ .+. ...+. ..+.+..+.|||||++|+..+. ...+.+||+..+ .+..+...
T Consensus 195 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------------d~~v~iwd~~~~~~~~~~~~~--- 258 (401)
T 4aez_A 195 SGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGN-------------DNVVQIWDARSSIPKFTKTNH--- 258 (401)
T ss_dssp TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTCSSEEEEECCC---
T ss_pred CCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeC-------------CCeEEEccCCCCCccEEecCC---
Confidence 356667776 222 23333 3556789999999999987763 367899998743 33333221
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCC
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDS 228 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~ 228 (459)
...+..+.|+|++.. ++.+.. | .....|+.++. ..++.............+.|++++
T Consensus 259 ----------~~~v~~~~~~p~~~~-ll~~~~---g------s~d~~i~i~d~---~~~~~~~~~~~~~~v~~~~~s~~~ 315 (401)
T 4aez_A 259 ----------NAAVKAVAWCPWQSN-LLATGG---G------TMDKQIHFWNA---ATGARVNTVDAGSQVTSLIWSPHS 315 (401)
T ss_dssp ----------SSCCCEEEECTTSTT-EEEEEC---C------TTTCEEEEEET---TTCCEEEEEECSSCEEEEEECSSS
T ss_pred ----------cceEEEEEECCCCCC-EEEEec---C------CCCCEEEEEEC---CCCCEEEEEeCCCcEEEEEECCCC
Confidence 234568999999984 443321 1 01235777776 333555444455567789999998
Q ss_pred cEEEEEeecCCccEEEEEEc
Q 012630 229 LALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v~ 248 (459)
..|+......++..++|.+.
T Consensus 316 ~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 316 KEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp SEEEEEECTTTCEEEEEEEE
T ss_pred CeEEEEeecCCCcEEEEecC
Confidence 66665432234556666654
No 92
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.06 E-value=0.012 Score=56.98 Aligned_cols=129 Identities=14% Similarity=0.166 Sum_probs=77.2
Q ss_pred cceEEEcC-CCcee-ecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccccccc
Q 012630 75 TQLVLATL-DGTVK-EFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p~~~~ 150 (459)
+.|.++|+ +|+.. .+.. ...+..+.|||||++|+..+. ...+.+||+..+. +..+..
T Consensus 206 ~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-------------d~~v~iwd~~~~~~~~~~~~------ 266 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD-------------DATCRLFDLRADQELMTYSH------ 266 (340)
T ss_dssp SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTTEEEEEECC------
T ss_pred CcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC-------------CCcEEEEECCCCcEEEEEcc------
Confidence 45666666 55433 3432 445678999999999877753 3678999987543 332221
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-eEeccccceeccceeCCCCc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-EILHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-~~L~~~~~~~~~~~Ws~D~~ 229 (459)
.....++..+.|+|||+ .|+-. .. ...|.+++. ..++. ..+..-......+.|++|+.
T Consensus 267 -----~~~~~~v~~~~~s~~g~-~l~~g-~~-----------d~~i~vwd~---~~~~~~~~~~~h~~~v~~~~~s~dg~ 325 (340)
T 1got_B 267 -----DNIICGITSVSFSKSGR-LLLAG-YD-----------DFNCNVWDA---LKADRAGVLAGHDNRVSCLGVTDDGM 325 (340)
T ss_dssp -----TTCCSCEEEEEECTTSS-EEEEE-ET-----------TSEEEEEET---TTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred -----CCcccceEEEEECCCCC-EEEEE-CC-----------CCeEEEEEc---ccCcEeeEeecCCCcEEEEEEcCCCC
Confidence 11233567899999998 55422 11 124666665 22233 23333344566789999987
Q ss_pred EEEEEeecCCccEEEE
Q 012630 230 ALVQETWFKTTQTRTW 245 (459)
Q Consensus 230 al~~~~~~~~~~~~ly 245 (459)
.|++... ++..++|
T Consensus 326 ~l~s~s~--D~~i~iW 339 (340)
T 1got_B 326 AVATGSW--DSFLKIW 339 (340)
T ss_dssp CEEEEET--TSCEEEE
T ss_pred EEEEEcC--CccEEec
Confidence 7776552 4555555
No 93
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.06 E-value=0.17 Score=52.70 Aligned_cols=242 Identities=8% Similarity=0.059 Sum_probs=119.6
Q ss_pred hcceEEEcC-CCceee-cCCC-----------c-eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee
Q 012630 74 TTQLVLATL-DGTVKE-FGPP-----------A-IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV 139 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~-l~~~-----------~-~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~ 139 (459)
..++.++|. +++... +... . ....+.+||||+++++.. . ....+.+||......
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~-~-----------~~g~i~vvd~~~~~~ 314 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV-K-----------ETGKVLLVNYKDIDN 314 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE-T-----------TTTEEEEEECTTSSS
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE-C-----------CCCeEEEEEecCCCc
Confidence 467888887 666543 2211 1 345789999999887664 2 246789999764332
Q ss_pred eeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ce
Q 012630 140 RQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LR 218 (459)
Q Consensus 140 ~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~ 218 (459)
..++..+ ....++.+.|+|||+ .++.+. .. .+.|.++|. ..++........ ..
T Consensus 315 l~~~~i~-----------~~~~~~~~~~spdg~-~l~va~-~~----------~~~v~v~D~---~tg~l~~~i~~g~~p 368 (543)
T 1nir_A 315 LTVTSIG-----------AAPFLHDGGWDSSHR-YFMTAA-NN----------SNKVAVIDS---KDRRLSALVDVGKTP 368 (543)
T ss_dssp CEEEEEE-----------CCSSCCCEEECTTSC-EEEEEE-GG----------GTEEEEEET---TTTEEEEEEECSSSB
T ss_pred ceeEEec-----------cCcCccCceECCCCC-EEEEEe-cC----------CCeEEEEEC---CCCeEEEeeccCCCC
Confidence 2232221 123567889999999 444332 11 235777777 433443333221 11
Q ss_pred e--cccee-CCC-CcEEEEEeecCCccEEEEEEcCCCC-CCCceEEeecCCCCccCCCCCCCeeeCCCCCEEEEEeeecc
Q 012630 219 F--RGVSW-CDD-SLALVQETWFKTTQTRTWLISPGSK-DTAPLILFDRSSEDVYSDPGLPMMRKSSTGTRVIAKIKKEN 293 (459)
Q Consensus 219 ~--~~~~W-s~D-~~al~~~~~~~~~~~~ly~v~~~~~-~~~~~~l~d~~~~d~y~~pg~~~~~~~~dg~~v~~~~~~~~ 293 (459)
+ .++.| ++| +.+++...- .+....+|-+++++. +.+.+++-..... ..+......+|+|+++
T Consensus 369 h~g~g~~~~~p~~g~~~~s~~~-~d~~V~v~d~~~~~~~~~~~~~v~~l~~~----g~~~~~v~~~pdg~~l-------- 435 (543)
T 1nir_A 369 HPGRGANFVHPKYGPVWSTSHL-GDGSISLIGTDPKNHPQYAWKKVAELQGQ----GGGSLFIKTHPKSSHL-------- 435 (543)
T ss_dssp CCTTCEEEEETTTEEEEEEEBS-SSSEEEEEECCTTTCTTTBTSEEEEEECS----CSCCCCEECCTTCCEE--------
T ss_pred CCCCCcccCCCCCccEEEeccC-CCceEEEEEeCCCCCchhcCeEEEEEEcC----CCCceEEEcCCCCCcE--------
Confidence 2 23444 566 565554431 223344444443211 1112333111110 0111223457777654
Q ss_pred CCCcEEEEEcCCCCCCCC-cceEEEEECCCCceE-EEee-------cCcccceEEEEEeecCCCccccccCCCEEEEEee
Q 012630 294 DQGTYILLNGRGATPEGD-VPFLDLFNINTGSKE-RIWE-------SDKEKYYETAVALNLDQSVGDVNLNQLKILTSKE 364 (459)
Q Consensus 294 ~~~~~ly~~~~g~s~~gd-~~~l~~~~l~tg~~~-~l~~-------~~~~~~~e~~~~~~~~~~~~~~~~d~~~i~~~~~ 364 (459)
|.... .+++.+ --.+..+|+++++.. .++. .++. ..+..+ .++.+|..++++..
T Consensus 436 ------~v~~~-~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~-------~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 436 ------YVDTT-FNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA---KRVVQP-------EYNKRGDEVWFSVW 498 (543)
T ss_dssp ------EECCT-TCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC---CEEEEE-------EECSSSSEEEEEEE
T ss_pred ------EEecC-CCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCC---CceEec-------cCCCCCCEEEEEee
Confidence 33221 111100 113667787776543 2210 1111 111111 14566788888765
Q ss_pred cC-CCCcceEEEECCCccee
Q 012630 365 SK-TEITQYWIQSWPHKKCR 383 (459)
Q Consensus 365 s~-~~P~ely~~~~~~g~~~ 383 (459)
+. .....+.++|.++++++
T Consensus 499 ~~~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 499 NGKNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp CCTTSCCEEEEEETTTTEEE
T ss_pred cCCCCCCeEEEEECCCceEE
Confidence 43 45688999998777654
No 94
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.013 Score=56.19 Aligned_cols=142 Identities=7% Similarity=-0.071 Sum_probs=82.1
Q ss_pred hcceEEEcC-C-Ccee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccccc
Q 012630 74 TTQLVLATL-D-GTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELPLV 148 (459)
Q Consensus 74 ~sqL~~v~~-~-G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p~~ 148 (459)
.+.|.++++ + ++.. .+. ....+..+.|||||++|+..+. ...+.+||+..+. +..+..
T Consensus 196 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~v~d~~~~~~~~~~~~---- 258 (369)
T 3zwl_B 196 DGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR-------------DTNSFLVDVSTLQVLKKYET---- 258 (369)
T ss_dssp TSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTCCEEEEEEC----
T ss_pred CCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC-------------CceEEEEECCCCceeeeecC----
Confidence 356788887 4 4333 333 2455689999999999987753 3678999987443 333321
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccc--cCCCCeEEeccCCCCCCCCceE-eccccceeccceeC
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVE--VSPRDIIYTQPAEPVEGEEPEI-LHKLDLRFRGVSWC 225 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~--~~~~~~l~~~~~~pf~g~~~~~-L~~~~~~~~~~~Ws 225 (459)
......+.|+|+++ .++.....+....... ......+..++. ..++... +.........+.|+
T Consensus 259 ----------~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~---~~~~~~~~~~~~~~~v~~~~~s 324 (369)
T 3zwl_B 259 ----------DCPLNTAVITPLKE-FIILGGGQEAKDVTTTSANEGKFEARFYHK---IFEEEIGRVQGHFGPLNTVAIS 324 (369)
T ss_dssp ----------SSCEEEEEECSSSS-EEEEEECCC-------------CEEEEEET---TTCCEEEEEECCSSCEEEEEEC
T ss_pred ----------CCCceeEEecCCCc-eEEEeecCCCceEEEEecCCCcceeEEEec---CCCcchhheecccCcEEEEEEC
Confidence 23456889999999 5654432211100000 001125666666 3224333 32234456778999
Q ss_pred CCCcEEEEEeecCCccEEEEEEc
Q 012630 226 DDSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 226 ~D~~al~~~~~~~~~~~~ly~v~ 248 (459)
+|+..|+... .++..++|.++
T Consensus 325 ~~~~~l~s~~--~dg~v~iw~~~ 345 (369)
T 3zwl_B 325 PQGTSYASGG--EDGFIRLHHFE 345 (369)
T ss_dssp TTSSEEEEEE--TTSEEEEEEEC
T ss_pred CCCCEEEEEc--CCCeEEEEECc
Confidence 9987777654 25667777774
No 95
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.05 E-value=0.0095 Score=58.31 Aligned_cols=149 Identities=15% Similarity=0.200 Sum_probs=77.9
Q ss_pred ceEEEcC--CCceeecCC---CceeeecccCCCCCeE-EEEEeccCcccccccCC----CCcceEEEecC--Cceeeeee
Q 012630 76 QLVLATL--DGTVKEFGP---PAIYTAVEPSPDQKYI-LITSIDRPYSFTVSYTK----FPQKVQVWTAD--GKFVRQLC 143 (459)
Q Consensus 76 qL~~v~~--~G~~~~l~~---~~~~~~~~~SPDG~~l-~~~~~~~p~s~~v~~~~----~~~~~~v~d~~--g~~~~~lt 143 (459)
.+.++++ +|+..++.. .+....+.|||||++| +++.....+. .+.. ....+.+|+++ |.....+.
T Consensus 61 ~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~---~~~~~~~~~~g~v~v~~~~~~g~~~~~~~ 137 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYA---VYANPFYKFAGYGNVFSVSETGKLEKNVQ 137 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCC---EEEEEESSSCCEEEEEEECTTCCEEEEEE
T ss_pred eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcce---eccceeecCCceEEEEccCCCCcCcceEe
Confidence 4555554 566554321 1223568999999984 4454311100 0000 23456777764 54443333
Q ss_pred cccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCC-CCCceEeccc-----cc
Q 012630 144 ELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVE-GEEPEILHKL-----DL 217 (459)
Q Consensus 144 ~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~-g~~~~~L~~~-----~~ 217 (459)
..+. .....+..+.|+|||+ .|+.. +.+ .+.|++++. + .|+.+.+... ..
T Consensus 138 ~~~~---------~~~~~~~~~~~spdG~-~l~~~---~~~--------~~~v~~~~~---~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 138 NYEY---------QENTGIHGMVFDPTET-YLYSA---DLT--------ANKLWTHRK---LASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp EEEC---------CTTCCEEEEEECTTSS-EEEEE---ETT--------TTEEEEEEE---CTTSCEEEEEEEECSSTTC
T ss_pred eEEe---------CCCCcceEEEECCCCC-EEEEE---cCC--------CCEEEEEEE---CCCCCEEEeeeEecCCCCC
Confidence 2110 0123567899999998 66533 222 235777666 3 2354433221 22
Q ss_pred eeccceeCCCCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 218 RFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 218 ~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
....+.|++||..++.... ......+|.++.+++
T Consensus 194 ~p~~~~~spdg~~l~v~~~-~~~~v~v~~~~~~~g 227 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALME-AGNRICEYVIDPATH 227 (365)
T ss_dssp CEEEEEECTTSSEEEEEET-TTTEEEEEEECTTTC
T ss_pred CCCEeEECCCCCEEEEEEC-CCCeEEEEEEeCCCC
Confidence 3455799999854443332 245667888876544
No 96
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.05 E-value=0.012 Score=57.50 Aligned_cols=131 Identities=15% Similarity=0.189 Sum_probs=77.5
Q ss_pred cceEEEcC-CCcee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 75 TQLVLATL-DGTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
+.+.++|+ +|+.. .+. ....+..++|||||++|+..+. ...+.+||+..+....+...
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-------------D~~v~lwd~~~~~~~~~~~~------ 280 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSD-------------DATCRLYDLRADREVAIYSK------ 280 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTTEEEEEECC------
T ss_pred CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeC-------------CCeEEEEECCCCcEEEEEcC------
Confidence 45667777 56543 333 2455679999999999877753 36788999875433222211
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLAL 231 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al 231 (459)
.....++..+.|+|||. .|+-. ..| ..|.+++. ..|.....+..-......+.|+||+..|
T Consensus 281 ----~~~~~~~~~~~~s~~g~-~l~~g-~~d-----------~~i~vwd~--~~~~~~~~l~~h~~~v~~l~~spdg~~l 341 (354)
T 2pbi_B 281 ----ESIIFGASSVDFSLSGR-LLFAG-YND-----------YTINVWDV--LKGSRVSILFGHENRVSTLRVSPDGTAF 341 (354)
T ss_dssp ----TTCCSCEEEEEECTTSS-EEEEE-ETT-----------SCEEEEET--TTCSEEEEECCCSSCEEEEEECTTSSCE
T ss_pred ----CCcccceeEEEEeCCCC-EEEEE-ECC-----------CcEEEEEC--CCCceEEEEECCCCcEEEEEECCCCCEE
Confidence 01223566889999998 45422 221 24666665 1231223333334456778999999777
Q ss_pred EEEeecCCccEEEE
Q 012630 232 VQETWFKTTQTRTW 245 (459)
Q Consensus 232 ~~~~~~~~~~~~ly 245 (459)
+...+ ++..++|
T Consensus 342 ~sgs~--D~~v~vW 353 (354)
T 2pbi_B 342 CSGSW--DHTLRVW 353 (354)
T ss_dssp EEEET--TSEEEEE
T ss_pred EEEcC--CCCEEec
Confidence 76553 4555555
No 97
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.04 E-value=0.013 Score=56.08 Aligned_cols=145 Identities=12% Similarity=0.047 Sum_probs=84.5
Q ss_pred hhcceEEEcC-CCceeecC--CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccc
Q 012630 73 TTTQLVLATL-DGTVKEFG--PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVE 149 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~--~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~ 149 (459)
...+|++++. +|+.+.+. .......+.++|||+.++... .. ......++++|.+++....+.....
T Consensus 64 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~-~~--------~~~~~~i~~~d~~~~~~~~~~~~~~-- 132 (333)
T 2dg1_A 64 FEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYL-GD--------FKSTGGIFAATENGDNLQDIIEDLS-- 132 (333)
T ss_dssp TTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEEC-TT--------SSSCCEEEEECTTSCSCEEEECSSS--
T ss_pred CCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeC-CC--------CCCCceEEEEeCCCCEEEEEEccCc--
Confidence 3468999998 77777654 234567899999998544332 11 0012468999988776653322110
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCc
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~ 229 (459)
....+..+.++|||. |++....+... .....||.++. ++++.+.+........++.|++|+.
T Consensus 133 --------~~~~~~~i~~d~~g~--l~v~~~~~~~~-----~~~~~l~~~~~---~~~~~~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 133 --------TAYCIDDMVFDSKGG--FYFTDFRGYST-----NPLGGVYYVSP---DFRTVTPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp --------SCCCEEEEEECTTSC--EEEEECCCBTT-----BCCEEEEEECT---TSCCEEEEEEEESSEEEEEECTTSS
T ss_pred --------cCCcccceEECCCCC--EEEEecccccc-----CCCceEEEEeC---CCCEEEEeecCCCcccceEECCCCC
Confidence 123566889999986 33332111000 11357888887 6546666543333356689999975
Q ss_pred -EEEEEeecCCccEEEEEEcCC
Q 012630 230 -ALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 230 -al~~~~~~~~~~~~ly~v~~~ 250 (459)
.++.... ...|+++++.
T Consensus 195 ~l~v~~~~----~~~i~~~d~~ 212 (333)
T 2dg1_A 195 VLWVTETT----ANRLHRIALE 212 (333)
T ss_dssp EEEEEEGG----GTEEEEEEEC
T ss_pred EEEEEeCC----CCeEEEEEec
Confidence 4444321 2257777764
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.04 E-value=0.0057 Score=59.50 Aligned_cols=116 Identities=15% Similarity=0.169 Sum_probs=66.2
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
...+..++|||||++|+..+. ...+.+||+..+. ...+... ..-...+..+.|+||
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~-------------d~~v~vwd~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQ-------------DRNAYVYEKRPDGTWKQTLVL----------LRLNRAATFVRWSPN 111 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEET-------------TSSEEEC------CCCCEEEC----------CCCSSCEEEEECCTT
T ss_pred CceEEEEEEeCCCCEEEEEeC-------------CCeEEEEEcCCCCceeeeeEe----------cccCCceEEEEECCC
Confidence 445689999999999987763 3678999987554 1111111 112335678999999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCC----ceEecc-ccceeccceeCCCCcEEEEEeecCCccEEEE
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE----PEILHK-LDLRFRGVSWCDDSLALVQETWFKTTQTRTW 245 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~----~~~L~~-~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly 245 (459)
+. .|+... .| ..|.+++. ..++ .+.+.. .......+.|++|+..|+.... ++..++|
T Consensus 112 ~~-~l~~~~-~d-----------~~i~iwd~---~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~--d~~i~iw 173 (377)
T 3dwl_C 112 ED-KFAVGS-GA-----------RVISVCYF---EQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA--DRKAYVL 173 (377)
T ss_dssp SS-CCEEEE-SS-----------SCEEECCC--------CCCCEEECSSCCSCEEEEEECTTSSEEEEEES--SSCEEEE
T ss_pred CC-EEEEEe-cC-----------CeEEEEEE---CCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC--CCEEEEE
Confidence 98 555332 11 24666665 3323 334433 3445677899999876665542 4567777
Q ss_pred EEc
Q 012630 246 LIS 248 (459)
Q Consensus 246 ~v~ 248 (459)
-+.
T Consensus 174 d~~ 176 (377)
T 3dwl_C 174 SAY 176 (377)
T ss_dssp EEC
T ss_pred EEE
Confidence 775
No 99
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.02 E-value=0.013 Score=57.25 Aligned_cols=147 Identities=10% Similarity=0.037 Sum_probs=81.3
Q ss_pred hcceEEEcC-CCcee-ecCC-------CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeee
Q 012630 74 TTQLVLATL-DGTVK-EFGP-------PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLC 143 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~-------~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt 143 (459)
.+.|.++++ +++.. .+.. ...+..+.|||||++|+..+... -...+.+||+. +..+..+.
T Consensus 206 dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~----------~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 206 NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN----------SFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET----------TEEEEEEEETTTCCEEEEEC
T ss_pred CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC----------CCceEEEEECCCCcccceec
Confidence 456788887 56433 3443 45568999999999998775310 01568999976 44444443
Q ss_pred cccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc-------c-
Q 012630 144 ELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK-------L- 215 (459)
Q Consensus 144 ~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~-------~- 215 (459)
..+..+..++....-...+..+.|+||+. .|+.. .. ...|++++. ..++...... .
T Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~~-----------dg~i~iwd~---~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1sq9_A 276 VPTHSSQASLGEFAHSSWVMSLSFNDSGE-TLCSA-GW-----------DGKLRFWDV---KTKERITTLNMHCDDIEIE 339 (397)
T ss_dssp BC--------CCBSBSSCEEEEEECSSSS-EEEEE-ET-----------TSEEEEEET---TTTEEEEEEECCGGGCSSG
T ss_pred cCcccccccccccccCCcEEEEEECCCCC-EEEEE-eC-----------CCeEEEEEc---CCCceeEEEecccCcccch
Confidence 21111111111111234667899999998 55532 21 124556665 3223322222 1
Q ss_pred --------------cceeccceeCCCC----------cEEEEEeecCCccEEEEEEc
Q 012630 216 --------------DLRFRGVSWCDDS----------LALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 216 --------------~~~~~~~~Ws~D~----------~al~~~~~~~~~~~~ly~v~ 248 (459)
......+.|++|+ ..|+... .++..++|.++
T Consensus 340 ~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~--~dg~i~iw~~~ 394 (397)
T 1sq9_A 340 EDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVC--LDRSIRWFREA 394 (397)
T ss_dssp GGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEE--TTTEEEEEEEE
T ss_pred hhhhccccccccccCCceeEEEeccccccccccccccceEEEec--CCCcEEEEEcC
Confidence 3346678999997 4566544 25666777664
No 100
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.01 E-value=0.23 Score=46.62 Aligned_cols=114 Identities=16% Similarity=0.287 Sum_probs=68.1
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
...+..+.|||||++|+..+. ...+.+|+.. +...+.+.. -..++..+.|+||
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~-------------dg~i~iw~~~~~~~~~~~~~-------------h~~~v~~~~~~~~ 76 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSA-------------DKLIKIWGAYDGKFEKTISG-------------HKLGISDVAWSSD 76 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTCCEEEEECC-------------CSSCEEEEEECTT
T ss_pred CCcEEEEEECCCCCEEEEeeC-------------CCeEEEEeCCCcccchhhcc-------------CCCceEEEEEcCC
Confidence 345689999999999987753 3668899975 444443322 1235678999999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-EeccccceeccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
+. .|+.. .. ...|.+++. ..++.. .+.........+.|++++..|+.... ++..++| ++
T Consensus 77 ~~-~l~s~-~~-----------d~~i~vwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--d~~i~iw--d~ 136 (312)
T 4ery_A 77 SN-LLVSA-SD-----------DKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF--DESVRIW--DV 136 (312)
T ss_dssp SS-EEEEE-ET-----------TSEEEEEET---TTCCEEEEEECCSSCEEEEEECSSSSEEEEEET--TSCEEEE--ET
T ss_pred CC-EEEEE-CC-----------CCEEEEEEC---CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC--CCcEEEE--EC
Confidence 98 55533 11 124666665 322332 23223334566789999866665442 3444444 54
Q ss_pred CC
Q 012630 250 GS 251 (459)
Q Consensus 250 ~~ 251 (459)
.+
T Consensus 137 ~~ 138 (312)
T 4ery_A 137 KT 138 (312)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 101
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.01 E-value=0.011 Score=57.28 Aligned_cols=116 Identities=14% Similarity=0.234 Sum_probs=68.3
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
...+..++|||||++|+..+. ...+.||+...+....+..+.. -...+..+.|+|||
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~-------------D~~v~iw~~~~~~~~~~~~~~~----------h~~~v~~v~~sp~~ 117 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASF-------------DATTCIWKKNQDDFECVTTLEG----------HENEVKSVAWAPSG 117 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEET-------------TSCEEEEEECCC-EEEEEEECC----------CSSCEEEEEECTTS
T ss_pred CCcEEEEEECCCCCEEEEEEC-------------CCcEEEEEccCCCeEEEEEccC----------CCCCceEEEEeCCC
Confidence 445689999999999987753 3678899877554333332211 12356789999999
Q ss_pred CceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-eE---eccccceeccceeCCCCcEEEEEeecCCccEEEEEE
Q 012630 172 PSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-EI---LHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 172 ~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-~~---L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v 247 (459)
. .|+-. ..|+ .|++++. ..++. .. +..-......+.|+|++..|+.... ++..++|.+
T Consensus 118 ~-~l~s~-s~D~-----------~v~iwd~---~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--d~~i~~w~~ 179 (345)
T 3fm0_A 118 N-LLATC-SRDK-----------SVWVWEV---DEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY--DDTVKLYRE 179 (345)
T ss_dssp S-EEEEE-ETTS-----------CEEEEEE---CTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET--TSCEEEEEE
T ss_pred C-EEEEE-ECCC-----------eEEEEEC---CCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC--CCcEEEEEe
Confidence 8 55533 2222 3455554 22122 21 2122334566899999866665442 455677765
Q ss_pred c
Q 012630 248 S 248 (459)
Q Consensus 248 ~ 248 (459)
.
T Consensus 180 ~ 180 (345)
T 3fm0_A 180 E 180 (345)
T ss_dssp E
T ss_pred c
Confidence 4
No 102
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.97 E-value=0.31 Score=47.53 Aligned_cols=93 Identities=17% Similarity=0.139 Sum_probs=53.0
Q ss_pred hcceEEEcC-CCceee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeeccccccc
Q 012630 74 TTQLVLATL-DGTVKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~~~ 150 (459)
.+.++++|. +|+... +..... ..+.+||||++|++....... +........+.+||... +.+..|.-.+..
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~-p~i~~spdg~~lyv~~~~~~~---~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~-- 103 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFN-GHVQVSNDGKKIYTMTTYHER---ITRGKRSDVVEVWDADKLTFEKEISLPPKR-- 103 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEE-EEEEECTTSSEEEEEEEEETT---SSSSCEEEEEEEEETTTCCEEEEEEECTTB--
T ss_pred cCeEEEEECCCCeEEEEecCCCC-CceEECCCCCEEEEEEecccc---cccCCCCCEEEEEECcCCcEEEEEEcCccc--
Confidence 457889998 776553 333333 389999999999777421000 00000124588899764 444444321100
Q ss_pred ccccccccccceeeeEEecCCCceEEEE
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWV 178 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~ 178 (459)
......+..+.++|||+ +||..
T Consensus 104 -----~~~g~~p~~i~~spdg~-~l~v~ 125 (361)
T 2oiz_A 104 -----VQGLNYDGLFRQTTDGK-FIVLQ 125 (361)
T ss_dssp -----CCBCCCGGGEEECTTSS-EEEEE
T ss_pred -----cccCCCcceEEECCCCC-EEEEE
Confidence 01123567899999999 66644
No 103
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.96 E-value=0.2 Score=48.59 Aligned_cols=142 Identities=8% Similarity=0.025 Sum_probs=77.0
Q ss_pred hcceEEEcC-CCc------eeecCCC------ceeeecccC----CCCCe-EEEEEeccCcccccccCCCCcceEEEecC
Q 012630 74 TTQLVLATL-DGT------VKEFGPP------AIYTAVEPS----PDQKY-ILITSIDRPYSFTVSYTKFPQKVQVWTAD 135 (459)
Q Consensus 74 ~sqL~~v~~-~G~------~~~l~~~------~~~~~~~~S----PDG~~-l~~~~~~~p~s~~v~~~~~~~~~~v~d~~ 135 (459)
.+.|.++++ +++ ...+... ..+..+.|+ |||++ |+..+. ...+.+||+.
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~ 156 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV-------------KGTTYIWKFH 156 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET-------------TSCEEEEEEE
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC-------------CCcEEEEeCC
Confidence 467888888 665 5555543 567899999 99999 766642 3678899876
Q ss_pred C------c-eee-----eeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCC
Q 012630 136 G------K-FVR-----QLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEP 203 (459)
Q Consensus 136 g------~-~~~-----~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~p 203 (459)
. + .+. .+... . ..+ ..-...+..+.|+||+ .|+ +... ...|++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~---~~~~~~i~~~~~~~~~--~l~-~~~~-----------dg~i~i~d~-- 214 (397)
T 1sq9_A 157 PFADESNSLTLNWSPTLELQGT-V--ESP---MTPSQFATSVDISERG--LIA-TGFN-----------NGTVQISEL-- 214 (397)
T ss_dssp SSSSHHHHTTTCCCCEEEEEEE-E--CCS---SSSCCCCCEEEECTTS--EEE-EECT-----------TSEEEEEET--
T ss_pred ccccccccceeeccCcceeeee-e--ccc---cCCCCCceEEEECCCc--eEE-EEeC-----------CCcEEEEEC--
Confidence 4 2 222 11100 0 000 0113346789999998 333 2221 235667766
Q ss_pred CCCCCceEeccc-------cceeccceeCCCCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 204 VEGEEPEILHKL-------DLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 204 f~g~~~~~L~~~-------~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
..++....... ......+.|++|+..|+.... +.....+.++++.++
T Consensus 215 -~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~-d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 215 -STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHD-SNSFGCITLYETEFG 268 (397)
T ss_dssp -TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEE-ETTEEEEEEEETTTC
T ss_pred -CCCceeEEEeccccccccCCccceEEECCCCCEEEEEec-CCCCceEEEEECCCC
Confidence 32243333333 445677899999866665432 111134666666543
No 104
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.95 E-value=0.36 Score=47.74 Aligned_cols=131 Identities=15% Similarity=0.251 Sum_probs=72.0
Q ss_pred hcceEEEcC-CCceeecC---C-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeecccc
Q 012630 74 TTQLVLATL-DGTVKEFG---P-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPL 147 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~---~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~ 147 (459)
.+.|++.|+ +|+..++. . ...+..++|||||++|+..+. ...+.|||+..+ .++.+...
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~-------------Dg~v~iWd~~~~~~~~~~~~h-- 188 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS-------------SAEVQLWDVQQQKRLRNMTSH-- 188 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTTEEEEEECCC--
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC-------------CCeEEEEEcCCCcEEEEEeCC--
Confidence 456788888 88766532 2 345689999999999987753 367899998744 34433221
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCC
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDD 227 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D 227 (459)
...+..+.| |+. .|+.. ..| ..++.++. .-.......+.........+.|+++
T Consensus 189 -----------~~~v~~~s~--~~~-~l~sg-s~d-----------~~i~~~d~-~~~~~~~~~~~~h~~~~~~~~~~~~ 241 (420)
T 4gga_A 189 -----------SARVGSLSW--NSY-ILSSG-SRS-----------GHIHHHDV-RVAEHHVATLSGHSQEVCGLRWAPD 241 (420)
T ss_dssp -----------SSCEEEEEE--ETT-EEEEE-ETT-----------SEEEEEET-TSSSCEEEEEECCSSCEEEEEECTT
T ss_pred -----------CCceEEEee--CCC-EEEEE-eCC-----------CceeEeee-cccceeeEEecccccceeeeeecCC
Confidence 112234455 444 44422 111 23444443 0011111222222334556789998
Q ss_pred CcEEEEEeecCCccEEEEEEc
Q 012630 228 SLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 228 ~~al~~~~~~~~~~~~ly~v~ 248 (459)
+..++... .++..++|-+.
T Consensus 242 g~~l~s~~--~D~~v~i~~~~ 260 (420)
T 4gga_A 242 GRHLASGG--NDNLVNVWPSA 260 (420)
T ss_dssp SSEEEEEE--TTSCEEEEESS
T ss_pred CCeeeeee--ccccceEEeec
Confidence 87776654 24555666554
No 105
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.94 E-value=0.019 Score=56.05 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=51.8
Q ss_pred hcceEEEcC-CCc-----------------eeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcc-eEEEe
Q 012630 74 TTQLVLATL-DGT-----------------VKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQK-VQVWT 133 (459)
Q Consensus 74 ~sqL~~v~~-~G~-----------------~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~-~~v~d 133 (459)
.+.|.++|+ +++ .+.+.. .+.+..++|||||++|+..+. ... +.|||
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~-------------d~~~v~iwd 224 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ-------------DGTIIRVFK 224 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEET-------------TCSEEEEEE
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC-------------CCCEEEEEE
Confidence 456777777 544 343443 456789999999999987753 355 89999
Q ss_pred cC-CceeeeeecccccccccccccccccceeeeEEecCCCceEEE
Q 012630 134 AD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYW 177 (459)
Q Consensus 134 ~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~ 177 (459)
+. |..+..+... .-...+..+.|+|||. .|+.
T Consensus 225 ~~~~~~~~~~~~g-----------~h~~~v~~~~~s~~~~-~l~s 257 (355)
T 3vu4_A 225 TEDGVLVREFRRG-----------LDRADVVDMKWSTDGS-KLAV 257 (355)
T ss_dssp TTTCCEEEEEECT-----------TCCSCEEEEEECTTSC-EEEE
T ss_pred CCCCcEEEEEEcC-----------CCCCcEEEEEECCCCC-EEEE
Confidence 86 5555555421 0123567899999998 5553
No 106
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.93 E-value=0.006 Score=64.43 Aligned_cols=130 Identities=15% Similarity=0.222 Sum_probs=74.6
Q ss_pred ceEEEcC-CCcee---ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeeccccccc
Q 012630 76 QLVLATL-DGTVK---EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLVEN 150 (459)
Q Consensus 76 qL~~v~~-~G~~~---~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~~~ 150 (459)
.|.+.++ +++.. .......+..++|||||++|+..+. ...+.+|++.. ++........
T Consensus 471 ~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~-------------d~~v~~w~~~~~~~~~~~~~~~---- 533 (611)
T 1nr0_A 471 KVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQ-------------SRKVIPYSVANNFELAHTNSWT---- 533 (611)
T ss_dssp EEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEET-------------TSCEEEEEGGGTTEESCCCCCC----
T ss_pred eEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcC-------------CCCEEEEEcCCCCceeeeeeee----
Confidence 4555555 44332 2234555689999999999987753 36788999763 3332110000
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCC-ce-Eecc-c-cceeccceeCC
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE-PE-ILHK-L-DLRFRGVSWCD 226 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~-~~-~L~~-~-~~~~~~~~Ws~ 226 (459)
.-...+..+.|+|||+ .|+-. ..| ..|.+++. ..++ .. .+.. - ......+.|++
T Consensus 534 ------~H~~~V~~v~fspdg~-~lasg-s~D-----------~~v~lW~~---~~~~~~~~~~~~~h~~~~v~~v~fs~ 591 (611)
T 1nr0_A 534 ------FHTAKVACVSWSPDNV-RLATG-SLD-----------NSVIVWNM---NKPSDHPIIIKGAHAMSSVNSVIWLN 591 (611)
T ss_dssp ------CCSSCEEEEEECTTSS-EEEEE-ETT-----------SCEEEEET---TCTTSCCEEETTSSTTSCEEEEEEEE
T ss_pred ------ecccceeEEEECCCCC-EEEEE-ECC-----------CcEEEEEC---CCcccccchhhccCcccCeeEEEEcC
Confidence 0123567899999999 66633 222 13555555 3222 22 2221 1 33466789999
Q ss_pred CCcEEEEEeecCCccEEEEEE
Q 012630 227 DSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 227 D~~al~~~~~~~~~~~~ly~v 247 (459)
|+. |+... .+...++|.+
T Consensus 592 d~~-l~s~~--~D~~i~lW~~ 609 (611)
T 1nr0_A 592 ETT-IVSAG--QDSNIKFWNV 609 (611)
T ss_dssp TTE-EEEEE--TTSCEEEEEC
T ss_pred CCE-EEEec--CCCCEEEEec
Confidence 987 66544 3566778865
No 107
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.92 E-value=0.018 Score=56.84 Aligned_cols=109 Identities=11% Similarity=0.177 Sum_probs=66.3
Q ss_pred eeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCce
Q 012630 95 YTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPST 174 (459)
Q Consensus 95 ~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~ 174 (459)
+..+.|||||++|+..+. ...+.|||+..+....... .-...+..+.|+||+. .
T Consensus 126 v~~v~~s~dg~~l~s~~~-------------d~~i~iwd~~~~~~~~~~~------------~h~~~v~~~~~~p~~~-~ 179 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAE-------------DRLIRIWDIENRKIVMILQ------------GHEQDIYSLDYFPSGD-K 179 (393)
T ss_dssp EEEEEECTTSSEEEEEET-------------TSCEEEEETTTTEEEEEEC------------CCSSCEEEEEECTTSS-E
T ss_pred EEEEEECCCCCEEEEEcC-------------CCeEEEEECCCCcEEEEEc------------cCCCCEEEEEEcCCCC-E
Confidence 568999999999987753 3678999987554432211 1123567899999998 5
Q ss_pred EEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCC-CCcEEEEEeecCCccEEEEE
Q 012630 175 LYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCD-DSLALVQETWFKTTQTRTWL 246 (459)
Q Consensus 175 l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~-D~~al~~~~~~~~~~~~ly~ 246 (459)
|+.. ..| ..|.+++. ..++.............+.|++ |+..|+.... ++..++|-
T Consensus 180 l~s~-s~d-----------~~v~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~--d~~v~iwd 235 (393)
T 1erj_A 180 LVSG-SGD-----------RTVRIWDL---RTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL--DRAVRVWD 235 (393)
T ss_dssp EEEE-ETT-----------SEEEEEET---TTTEEEEEEECSSCEEEEEECSTTCCEEEEEET--TSCEEEEE
T ss_pred EEEe-cCC-----------CcEEEEEC---CCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC--CCcEEEEE
Confidence 5532 211 24666666 3334333333344456688998 7766665442 44455554
No 108
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.91 E-value=0.02 Score=54.79 Aligned_cols=129 Identities=15% Similarity=0.256 Sum_probs=72.3
Q ss_pred cceEEEcC-CCcee-ec-CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccccccc
Q 012630 75 TQLVLATL-DGTVK-EF-GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l-~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p~~~~ 150 (459)
+.|.+.++ +++.. .+ +....+..+.|||||++|+..+. ...+.|||+..+. +..+..
T Consensus 176 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~-------------dg~i~iwd~~~~~~~~~~~~------ 236 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK-------------DGEIMLWNLAAKKAMYTLSA------ 236 (319)
T ss_dssp SCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET-------------TCEEEEEETTTTEEEEEEEC------
T ss_pred CEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEECCCCcEEEEecC------
Confidence 34555555 44322 22 33455678999999999887753 3678999987544 333321
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEec--------cccceeccc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILH--------KLDLRFRGV 222 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~--------~~~~~~~~~ 222 (459)
...+..+.|+||+. .|+... +.+ . .+|.++. +.....+. ........+
T Consensus 237 --------~~~v~~~~~sp~~~-~la~~~--~~~---i------~v~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~ 292 (319)
T 3frx_A 237 --------QDEVFSLAFSPNRY-WLAAAT--ATG---I------KVFSLDP----QYLVDDLRPEFAGYSKAAEPHAVSL 292 (319)
T ss_dssp --------CSCEEEEEECSSSS-EEEEEE--TTE---E------EEEEETT----EEEEEEECCCCTTCCGGGCCCEEEE
T ss_pred --------CCcEEEEEEcCCCC-EEEEEc--CCC---c------EEEEeCc----CeeeeccCccccccccCcCcceeEE
Confidence 12456899999998 555322 111 0 1222211 00001110 011223458
Q ss_pred eeCCCCcEEEEEeecCCccEEEEEEc
Q 012630 223 SWCDDSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 223 ~Ws~D~~al~~~~~~~~~~~~ly~v~ 248 (459)
+|+|||..|+... .++..++|.+.
T Consensus 293 ~~spdg~~l~sg~--~Dg~i~vWd~~ 316 (319)
T 3frx_A 293 AWSADGQTLFAGY--TDNVIRVWQVM 316 (319)
T ss_dssp EECTTSSEEEEEE--TTSCEEEEEEE
T ss_pred EECCCCCEEEEee--cCceEEEEEEe
Confidence 9999998777655 35677888775
No 109
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.91 E-value=0.0065 Score=59.07 Aligned_cols=113 Identities=11% Similarity=0.134 Sum_probs=64.1
Q ss_pred eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCc
Q 012630 94 IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPS 173 (459)
Q Consensus 94 ~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~ 173 (459)
.+..++|||||++|+..+. ...+.|||+.++..+.+.... .-...+..+.|+||+.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~-------------d~~i~iw~~~~~~~~~~~~~~----------~h~~~v~~~~~s~~~~- 68 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTA-------------TNQVELYEQDGNGWKHARTFS----------DHDKIVTCVDWAPKSN- 68 (377)
T ss_dssp CCSCCEECSSSSEEECCCS-------------SSCBCEEEEETTEEEECCCBC----------CCSSCEEEEEECTTTC-
T ss_pred cEEEEEECCCCCEEEEecC-------------CCEEEEEEccCCceEEEEEEe----------cCCceEEEEEEeCCCC-
Confidence 3578999999999876642 367889998765323232221 1133567899999988
Q ss_pred eEEEEEeccCCccccccCCCCeEEeccCCCCCCCC----ceEeccccceeccceeCCCCcEEEEEeecCCccEEEEEE
Q 012630 174 TLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE----PEILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 174 ~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~----~~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v 247 (459)
.|+... .| ..|.+++. ..++ ...+.........+.|++|+..|+.... ++..++|.+
T Consensus 69 ~l~s~s-~d-----------~~v~vwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~ 129 (377)
T 3dwl_C 69 RIVTCS-QD-----------RNAYVYEK---RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG--ARVISVCYF 129 (377)
T ss_dssp CEEEEE-TT-----------SSEEEC---------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES--SSCEEECCC
T ss_pred EEEEEe-CC-----------CeEEEEEc---CCCCceeeeeEecccCCceEEEEECCCCCEEEEEec--CCeEEEEEE
Confidence 565332 11 24666665 3323 2223333445677899999765555442 344444444
No 110
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.87 E-value=0.016 Score=57.02 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=71.5
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
.+.+..+.|||||++|+..+. ...+.+||+..+. +..+...+... +.....+..+.|+||
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~-------------D~~i~lwd~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSD-------------DGTCRLFDMRTGHQLQVYNREPDRN------DNELPIVTSVAFSIS 309 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECS-------------SSCEEEEETTTTEEEEEECCCCSSS------CCSSCSCSEEEECSS
T ss_pred CCCeEEEEEecCCCeEEEEcC-------------CCeEEEEECCCCcEEEEeccccccc------ccccCceEEEEECCC
Confidence 455678999999999876652 3678999987544 33333221111 111223568899999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-Eecc----ccceeccceeCCCCcEEEEEeecCCccEEEE
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHK----LDLRFRGVSWCDDSLALVQETWFKTTQTRTW 245 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~----~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly 245 (459)
|+ .|+ +... ...|++++. ..++.. .+.. -...+..+.|++||..|+...+ ++..++|
T Consensus 310 g~-~l~-~g~~-----------dg~i~vwd~---~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~--D~~i~iW 371 (380)
T 3iz6_a 310 GR-LLF-AGYS-----------NGDCYVWDT---LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW--DKNLKIW 371 (380)
T ss_dssp SS-EEE-EECT-----------TSCEEEEET---TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT--TSCEEEE
T ss_pred CC-EEE-EEEC-----------CCCEEEEEC---CCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC--CCCEEEE
Confidence 98 454 2221 124666665 222322 2211 1234566899999988877653 5667788
Q ss_pred EEc
Q 012630 246 LIS 248 (459)
Q Consensus 246 ~v~ 248 (459)
.+.
T Consensus 372 ~~~ 374 (380)
T 3iz6_a 372 AFS 374 (380)
T ss_dssp ECC
T ss_pred ecC
Confidence 764
No 111
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.87 E-value=0.18 Score=50.00 Aligned_cols=139 Identities=10% Similarity=0.048 Sum_probs=87.8
Q ss_pred HHhhcceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccc
Q 012630 71 HYTTTQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLV 148 (459)
Q Consensus 71 ~~~~sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~ 148 (459)
+-...+|+++++ +++...+.. ......+.|.|++++|.++-. ....|+.++++|+....+....+
T Consensus 92 ~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~------------~~~~I~r~~~~g~~~~~~~~~~~- 158 (386)
T 3v65_B 92 FANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV------------TLDRILRANLNGSNVEEVVSTGL- 158 (386)
T ss_dssp EECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEET------------TTTEEEEEETTSCCEEEEECSSC-
T ss_pred eecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeC------------CCCcEEEEecCCCCcEEEEeCCC-
Confidence 334578999999 555555443 344568999999999877742 23678899998876655533211
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccceeCCC
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSWCDD 227 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~Ws~D 227 (459)
..+..+...+.+. .|||+... ...|++++. +|...+.+.... ..-.+++..++
T Consensus 159 -----------~~p~glavd~~~g-~lY~~d~~-----------~~~I~~~~~---dg~~~~~l~~~~l~~P~giavdp~ 212 (386)
T 3v65_B 159 -----------ESPGGLAVDWVHD-KLYWTDSG-----------TSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPM 212 (386)
T ss_dssp -----------SCCCCEEEETTTT-EEEEEETT-----------TTEEEECBT---TSCSCEEEECSSCSCEEEEEEETT
T ss_pred -----------CCccEEEEEeCCC-eEEEEcCC-----------CCeEEEEeC---CCCceEEeecCCCCCCcEEEEEcC
Confidence 1334667777766 88988531 346888887 764555554332 23456777775
Q ss_pred -CcEEEEEeecCCccEEEEEEcCCC
Q 012630 228 -SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 228 -~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
+..++.+. ....+|+++++++
T Consensus 213 ~g~ly~td~---~~~~~I~r~~~dG 234 (386)
T 3v65_B 213 EGTIYWTDW---GNTPRIEASSMDG 234 (386)
T ss_dssp TTEEEEEEC---SSSCEEEEEETTS
T ss_pred CCeEEEecc---CCCCEEEEEeCCC
Confidence 45444432 1236799999874
No 112
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.78 E-value=0.012 Score=58.12 Aligned_cols=125 Identities=18% Similarity=0.219 Sum_probs=68.3
Q ss_pred CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeeccccccccccccc-----cccccee
Q 012630 90 GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYN-----SVREGMR 163 (459)
Q Consensus 90 ~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~-----~~~~~~r 163 (459)
.....+..++|||||++|+..+. ..+.||++. |..+..+.........|.... .....++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~--------------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 127 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCN--------------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR 127 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECB--------------SCEEEEETTTCCEEEEECC-----------------CCCCBEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcC--------------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEE
Confidence 34555678999999999987642 356788865 555555433211111110000 0112367
Q ss_pred eeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEec-cccceeccceeCCCCcEEEEEeecCCccE
Q 012630 164 LISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILH-KLDLRFRGVSWCDDSLALVQETWFKTTQT 242 (459)
Q Consensus 164 ~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~-~~~~~~~~~~Ws~D~~al~~~~~~~~~~~ 242 (459)
.+.|+|||+ .|+.. ..| ..|.+++. ..++..... .-......+.|++|+..|+... .++..
T Consensus 128 ~v~~s~dg~-~l~s~-~~d-----------~~i~iwd~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s--~d~~v 189 (393)
T 1erj_A 128 SVCFSPDGK-FLATG-AED-----------RLIRIWDI---ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS--GDRTV 189 (393)
T ss_dssp EEEECTTSS-EEEEE-ETT-----------SCEEEEET---TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSEE
T ss_pred EEEECCCCC-EEEEE-cCC-----------CeEEEEEC---CCCcEEEEEccCCCCEEEEEEcCCCCEEEEec--CCCcE
Confidence 899999998 55532 211 24666666 332333222 2334466789999987666544 24445
Q ss_pred EEEE
Q 012630 243 RTWL 246 (459)
Q Consensus 243 ~ly~ 246 (459)
++|-
T Consensus 190 ~iwd 193 (393)
T 1erj_A 190 RIWD 193 (393)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 113
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.78 E-value=0.016 Score=60.01 Aligned_cols=132 Identities=17% Similarity=0.202 Sum_probs=81.5
Q ss_pred hcceEEEcC-CCce--eecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeeccccc
Q 012630 74 TTQLVLATL-DGTV--KEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCELPLV 148 (459)
Q Consensus 74 ~sqL~~v~~-~G~~--~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~p~~ 148 (459)
.+.|.++++ +++. ..+.. ...+..+.|||||++|+.... ...+.+||+..++. ..+..
T Consensus 466 d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-------------dg~i~iw~~~~~~~~~~~~~---- 528 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDV-------------MGKILLYDLQSREVKTSRWA---- 528 (615)
T ss_dssp TSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTTEEEECCSC----
T ss_pred CCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCC-------------CCeEEEeeCCCCcceeEeec----
Confidence 456788887 5554 33332 455689999999999988753 36789999864433 32211
Q ss_pred ccccccccccccceeeeEEec----------CCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCC-CceE-ecccc
Q 012630 149 ENIPIAYNSVREGMRLISWRA----------DRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE-EPEI-LHKLD 216 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~Wsp----------Dg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~-~~~~-L~~~~ 216 (459)
.-...+..+.|+| |++ .|+.. ..| ..|++++. ..+ +... +..-.
T Consensus 529 --------~h~~~v~~~~~sp~~~~~~~~~~~~~-~l~~~-~~d-----------g~i~iw~~---~~~~~~~~~~~~h~ 584 (615)
T 1pgu_A 529 --------FRTSKINAISWKPAEKGANEEEIEED-LVATG-SLD-----------TNIFIYSV---KRPMKIIKALNAHK 584 (615)
T ss_dssp --------CCSSCEEEEEECCCC------CCSCC-EEEEE-ETT-----------SCEEEEES---SCTTCCEEETTSST
T ss_pred --------CCCCceeEEEEcCccccccccccCCC-EEEEE-cCC-----------CcEEEEEC---CCCceechhhhcCc
Confidence 0134567899999 888 55533 222 24666665 322 2332 22234
Q ss_pred ceeccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 217 LRFRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 217 ~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
.....+.|++|+. |+... .++..++|.++.
T Consensus 585 ~~v~~l~~s~~~~-l~s~~--~d~~v~iw~~~~ 614 (615)
T 1pgu_A 585 DGVNNLLWETPST-LVSSG--ADACIKRWNVVL 614 (615)
T ss_dssp TCEEEEEEEETTE-EEEEE--TTSCEEEEEEC-
T ss_pred cceEEEEEcCCCC-eEEec--CCceEEEEeeec
Confidence 4567789999988 77654 356778888764
No 114
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.76 E-value=0.036 Score=53.49 Aligned_cols=133 Identities=15% Similarity=0.124 Sum_probs=77.7
Q ss_pred cceEEEcC-CCcee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 75 TQLVLATL-DGTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
+.|.+.|+ +|+.. .+. ....+..+.|||||++|+..+. ...+.+||+.+.....+....
T Consensus 98 ~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~-------------d~~i~~wd~~~~~~~~~~~~~----- 159 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA-------------EREIKLWNILGECKFSSAEKE----- 159 (343)
T ss_dssp SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET-------------TSCEEEEESSSCEEEECCTTT-----
T ss_pred CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC-------------CCEEEEEeccCCceeeeeccc-----
Confidence 45677777 66433 343 3556789999999999877652 367899998865444332211
Q ss_pred cccccccccceeeeEEecCCCc---------eEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccc
Q 012630 152 PIAYNSVREGMRLISWRADRPS---------TLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGV 222 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~---------~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~ 222 (459)
.-...+..+.|+|++.. .|+ +... -..|.+++. .+.....+..-......+
T Consensus 160 -----~~~~~v~~~~~~~~~~~~~~~~~~~~~l~-s~~~-----------d~~i~iwd~---~~~~~~~~~~h~~~v~~~ 219 (343)
T 2xzm_R 160 -----NHSDWVSCVRYSPIMKSANKVQPFAPYFA-SVGW-----------DGRLKVWNT---NFQIRYTFKAHESNVNHL 219 (343)
T ss_dssp -----SCSSCEEEEEECCCCCSCSCCCSSCCEEE-EEET-----------TSEEEEEET---TTEEEEEEECCSSCEEEE
T ss_pred -----CCCceeeeeeeccccccccccCCCCCEEE-EEcC-----------CCEEEEEcC---CCceeEEEcCccccceEE
Confidence 11234568899999742 222 2111 124556665 431222222233346678
Q ss_pred eeCCCCcEEEEEeecCCccEEEEEE
Q 012630 223 SWCDDSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 223 ~Ws~D~~al~~~~~~~~~~~~ly~v 247 (459)
.|++|+..|+... .++..++|-+
T Consensus 220 ~~s~~g~~l~sgs--~dg~v~iwd~ 242 (343)
T 2xzm_R 220 SISPNGKYIATGG--KDKKLLIWDI 242 (343)
T ss_dssp EECTTSSEEEEEE--TTCEEEEEES
T ss_pred EECCCCCEEEEEc--CCCeEEEEEC
Confidence 9999997777654 2455566655
No 115
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.74 E-value=0.23 Score=47.73 Aligned_cols=142 Identities=4% Similarity=-0.113 Sum_probs=78.3
Q ss_pred hcceEEEcC-CCce-eecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceee-eeeccccccc
Q 012630 74 TTQLVLATL-DGTV-KEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVR-QLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~-~G~~-~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~-~lt~~p~~~~ 150 (459)
...|.++|. +|+. ..+........+.+|||| +|.++. . ....+.++|.+.+++. .+.-. ...
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~-~-----------~~~~v~~iD~~t~~~~~~i~~g-~~~- 127 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQ-I-----------WDYRIFIINPKTYEITGYIECP-DMD- 127 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEE-B-----------SCSEEEEEETTTTEEEEEEECT-TCC-
T ss_pred CCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEE-C-----------CCCeEEEEECCCCeEEEEEEcC-Ccc-
Confidence 357899998 7876 456544445688899999 564443 1 2367899998765543 33211 100
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcE
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLA 230 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~a 230 (459)
.....+..+.+ ++. .|+.+. .+ ..+.|++++. ..++............++..++||..
T Consensus 128 ------~~~~~p~~i~~--~~~-~lyv~~---~~-------~~~~v~viD~---~t~~~~~~i~~g~~p~~i~~~~dG~l 185 (328)
T 3dsm_A 128 ------MESGSTEQMVQ--YGK-YVYVNC---WS-------YQNRILKIDT---ETDKVVDELTIGIQPTSLVMDKYNKM 185 (328)
T ss_dssp ------TTTCBCCCEEE--ETT-EEEEEE---CT-------TCCEEEEEET---TTTEEEEEEECSSCBCCCEECTTSEE
T ss_pred ------ccCCCcceEEE--ECC-EEEEEc---CC-------CCCEEEEEEC---CCCeEEEEEEcCCCccceEEcCCCCE
Confidence 00113445666 344 454331 11 1346888877 43243332233333456788888865
Q ss_pred EEEEeec-CCc-----cEEEEEEcCCCC
Q 012630 231 LVQETWF-KTT-----QTRTWLISPGSK 252 (459)
Q Consensus 231 l~~~~~~-~~~-----~~~ly~v~~~~~ 252 (459)
++..... +.. ...|++++++++
T Consensus 186 ~v~~~~~~~~~~~~~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 186 WTITDGGYEGSPYGYEAPSLYRIDAETF 213 (328)
T ss_dssp EEEBCCBCTTCSSCBCCCEEEEEETTTT
T ss_pred EEEECCCccCCccccCCceEEEEECCCC
Confidence 5544321 100 257999998764
No 116
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.71 E-value=0.011 Score=56.87 Aligned_cols=116 Identities=14% Similarity=0.174 Sum_probs=69.6
Q ss_pred ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCC
Q 012630 93 AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRP 172 (459)
Q Consensus 93 ~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~ 172 (459)
..+..++|||||++|++... ...+.+||+.++....+.... .-...+..+.|+||+.
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~-------------d~~v~i~~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~ 65 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPN-------------NHEVHIYEKSGNKWVQVHELK----------EHNGQVTGVDWAPDSN 65 (372)
T ss_dssp SCCCEEEECTTSSEEEEECS-------------SSEEEEEEEETTEEEEEEEEE----------CCSSCEEEEEEETTTT
T ss_pred CCeEEEEECCCCCEEEEEeC-------------CCEEEEEeCCCCcEEeeeeec----------CCCCcccEEEEeCCCC
Confidence 34678999999999987742 367899998876422222221 1123567899999988
Q ss_pred ceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEe---ccccceeccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 173 STLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEIL---HKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 173 ~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L---~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
.|+... .| ..|.+++. ..++.... .........+.|++|+..|+... .++..++|.++.
T Consensus 66 -~l~~~~-~d-----------g~i~vwd~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~i~d~~~ 127 (372)
T 1k8k_C 66 -RIVTCG-TD-----------RNAYVWTL---KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS--GSRVISICYFEQ 127 (372)
T ss_dssp -EEEEEE-TT-----------SCEEEEEE---ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE--TTSSEEEEEEET
T ss_pred -EEEEEc-CC-----------CeEEEEEC---CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe--CCCEEEEEEecC
Confidence 555332 11 13555554 32232222 22334466789999986666544 245567777654
No 117
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.69 E-value=0.024 Score=55.75 Aligned_cols=130 Identities=8% Similarity=0.084 Sum_probs=78.2
Q ss_pred cceEEEcC-CCceeecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccccc
Q 012630 75 TQLVLATL-DGTVKEFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P 152 (459)
+.+++.++ +++..... .........|||||++|+..+. ...+.+||+..+....+..
T Consensus 78 ~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~~~~~~-------- 136 (420)
T 3vl1_A 78 GHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTT-------------EGDIKVLDSNFNLQREIDQ-------- 136 (420)
T ss_dssp TEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEET-------------TSCEEEECTTSCEEEEETT--------
T ss_pred CcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEEC-------------CCCEEEEeCCCcceeeecc--------
Confidence 46777777 55443333 2344456689999999988753 3678999988665544321
Q ss_pred ccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEE
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALV 232 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~ 232 (459)
.-...+..+.|+||+. .|+.. .. ...|++++. . ++...+.+.........+.|++|+..|+
T Consensus 137 ----~h~~~v~~~~~~~~~~-~l~s~-s~-----------d~~i~iwd~-~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 137 ----AHVSEITKLKFFPSGE-ALISS-SQ-----------DMQLKIWSV-K-DGSNPRTLIGHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp ----SSSSCEEEEEECTTSS-EEEEE-ET-----------TSEEEEEET-T-TCCCCEEEECCSSCEEEEEEETTTTEEE
T ss_pred ----cccCccEEEEECCCCC-EEEEE-eC-----------CCeEEEEeC-C-CCcCceEEcCCCCcEEEEEEcCCCCEEE
Confidence 1133567899999988 55532 21 124666665 1 2323444443444567789999986666
Q ss_pred EEeecCCccEEEEE
Q 012630 233 QETWFKTTQTRTWL 246 (459)
Q Consensus 233 ~~~~~~~~~~~ly~ 246 (459)
.... ++..++|-
T Consensus 198 s~~~--d~~v~iwd 209 (420)
T 3vl1_A 198 SASL--DGTIRLWE 209 (420)
T ss_dssp EEET--TSCEEEEE
T ss_pred EEcC--CCcEEEeE
Confidence 5442 34445553
No 118
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.68 E-value=0.02 Score=55.16 Aligned_cols=132 Identities=16% Similarity=0.247 Sum_probs=75.0
Q ss_pred ceEEEcC-CCc---eeecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 76 QLVLATL-DGT---VKEFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 76 qL~~v~~-~G~---~~~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
.|.++++ +++ ...+. ....+..+.|||||++|+..+. ...+.+||+..+.........
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-------------dg~i~vwd~~~~~~~~~~~~~---- 93 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT-------------DRNAYVWTLKGRTWKPTLVIL---- 93 (372)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET-------------TSCEEEEEEETTEEEEEEECC----
T ss_pred EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC-------------CCeEEEEECCCCeeeeeEEee----
Confidence 4455555 442 33343 3455689999999999987753 367899998765533222211
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc----eEecc-ccceeccceeC
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP----EILHK-LDLRFRGVSWC 225 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~----~~L~~-~~~~~~~~~Ws 225 (459)
.....+..+.|+||+. .|+... .| ..|++++. ..++. ..+.. .......+.|+
T Consensus 94 ------~~~~~v~~~~~~~~~~-~l~~~~-~d-----------~~v~i~d~---~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 94 ------RINRAARCVRWAPNEK-KFAVGS-GS-----------RVISICYF---EQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp ------CCSSCEEEEEECTTSS-EEEEEE-TT-----------SSEEEEEE---ETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred ------cCCCceeEEEECCCCC-EEEEEe-CC-----------CEEEEEEe---cCCCcceeeeeeecccCCCeeEEEEc
Confidence 1133567899999988 555432 11 12444433 22232 22211 23446678999
Q ss_pred CCCcEEEEEeecCCccEEEEEEc
Q 012630 226 DDSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 226 ~D~~al~~~~~~~~~~~~ly~v~ 248 (459)
+|+..|+... .++..++|-+.
T Consensus 152 ~~~~~l~~~~--~dg~i~~~d~~ 172 (372)
T 1k8k_C 152 PNSVLLAAGS--CDFKCRIFSAY 172 (372)
T ss_dssp TTSSEEEEEE--TTSCEEEEECC
T ss_pred CCCCEEEEEc--CCCCEEEEEcc
Confidence 9986666544 24556666653
No 119
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.67 E-value=0.016 Score=56.11 Aligned_cols=116 Identities=12% Similarity=0.205 Sum_probs=68.1
Q ss_pred eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCc
Q 012630 94 IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPS 173 (459)
Q Consensus 94 ~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~ 173 (459)
.+..++|||||++|+..+. ...+.|||++++......... .+-...++.+.|+|||.
T Consensus 18 ~v~~l~~sp~g~~las~~~-------------D~~i~iw~~~~~~~~~~~~~~---------~~h~~~v~~~~~sp~g~- 74 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGG-------------DRRIRIWGTEGDSWICKSVLS---------EGHQRTVRKVAWSPCGN- 74 (345)
T ss_dssp CEEEEEECTTSSCEEEEET-------------TSCEEEEEEETTEEEEEEEEC---------SSCSSCEEEEEECTTSS-
T ss_pred cEEEEEECCCCCEEEEEcC-------------CCeEEEEEcCCCcceeeeeec---------cccCCcEEEEEECCCCC-
Confidence 4578999999999987753 367899998765432111100 01123567899999998
Q ss_pred eEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceE---eccccceeccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 174 TLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEI---LHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 174 ~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~---L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
.|+-. ..|+ .+.+++. ..++... +..-......+.|+||+..|+... .++..++|.+..
T Consensus 75 ~l~s~-s~D~-----------~v~iw~~---~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s--~D~~v~iwd~~~ 136 (345)
T 3fm0_A 75 YLASA-SFDA-----------TTCIWKK---NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS--RDKSVWVWEVDE 136 (345)
T ss_dssp EEEEE-ETTS-----------CEEEEEE---CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEEECT
T ss_pred EEEEE-ECCC-----------cEEEEEc---cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE--CCCeEEEEECCC
Confidence 55533 2222 2333433 2222222 222233466789999987777654 256677777653
No 120
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.64 E-value=0.014 Score=63.08 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=70.0
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
.+.+..++|||||++|++... ...+.|||.. |..++.+... ...++.+.|+||
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~-------------~g~v~iwd~~~~~~~~~~~~~-------------~~~v~~~~~s~~ 66 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLY-------------SGRVEIWNYETQVEVRSIQVT-------------ETPVRAGKFIAR 66 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEET-------------TSEEEEEETTTTEEEEEEECC-------------SSCEEEEEEEGG
T ss_pred CCceEEEEECCCCCEEEEEeC-------------CCEEEEEECCCCceEEEEecC-------------CCcEEEEEEeCC
Confidence 445679999999999988852 3678999976 4445544421 235678999999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-eEeccccceeccceeCCCCcEEEEEeecCCccEEEEEE
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-EILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v 247 (459)
|+ .|+... . ...|.+++. ..++. ..+.........+.|++|+..|+... .++..++|.+
T Consensus 67 ~~-~l~~~~-~-----------dg~i~vw~~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~vw~~ 126 (814)
T 3mkq_A 67 KN-WIIVGS-D-----------DFRIRVFNY---NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNW 126 (814)
T ss_dssp GT-EEEEEE-T-----------TSEEEEEET---TTCCEEEEEECCSSCEEEEEECSSSSEEEEEE--TTSEEEEEEG
T ss_pred CC-EEEEEe-C-----------CCeEEEEEC---CCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc--CCCEEEEEEC
Confidence 98 666432 1 124666665 32243 33433444567789999986555433 2344455544
No 121
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.62 E-value=0.14 Score=48.74 Aligned_cols=122 Identities=8% Similarity=0.097 Sum_probs=73.8
Q ss_pred eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCc
Q 012630 94 IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPS 173 (459)
Q Consensus 94 ~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~ 173 (459)
...++.|+|||+ |+++.. ....+++||.+++..+.+.... ...+..+.|+|||.
T Consensus 46 ~~~~~~~~~~g~-l~~~~~------------~~~~i~~~d~~~~~~~~~~~~~------------~~~~~~i~~~~dg~- 99 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDV------------FEGNIFKINPETKEIKRPFVSH------------KANPAAIKIHKDGR- 99 (333)
T ss_dssp CEEEEEECTTSC-EEEEET------------TTCEEEEECTTTCCEEEEEECS------------SSSEEEEEECTTSC-
T ss_pred cccCcEECCCCC-EEEEEC------------CCCEEEEEeCCCCcEEEEeeCC------------CCCcceEEECCCCc-
Confidence 346899999998 655532 1357899998877766554210 13567899999987
Q ss_pred eEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc---ccceeccceeCCCCcEEEEEee--cCCccEEEEEEc
Q 012630 174 TLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK---LDLRFRGVSWCDDSLALVQETW--FKTTQTRTWLIS 248 (459)
Q Consensus 174 ~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~---~~~~~~~~~Ws~D~~al~~~~~--~~~~~~~ly~v~ 248 (459)
|+.....+ + .....|+.++. +++..+.+.. .......+.+++||..++.... .......||+++
T Consensus 100 -l~v~~~~~-~------~~~~~i~~~d~---~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~ 168 (333)
T 2dg1_A 100 -LFVCYLGD-F------KSTGGIFAATE---NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS 168 (333)
T ss_dssp -EEEEECTT-S------SSCCEEEEECT---TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEEC
T ss_pred -EEEEeCCC-C------CCCceEEEEeC---CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEe
Confidence 33332211 0 01246888887 6545553322 1223556788999876665432 112356899999
Q ss_pred CCCC
Q 012630 249 PGSK 252 (459)
Q Consensus 249 ~~~~ 252 (459)
++++
T Consensus 169 ~~~~ 172 (333)
T 2dg1_A 169 PDFR 172 (333)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8753
No 122
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.58 E-value=0.079 Score=50.07 Aligned_cols=112 Identities=12% Similarity=0.038 Sum_probs=71.4
Q ss_pred eeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCce
Q 012630 95 YTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPST 174 (459)
Q Consensus 95 ~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~ 174 (459)
-.++.|+|+++.|+++.. ....|++||.+++....+.. ...+..+.|++||. .
T Consensus 15 ~Egp~w~~~~~~l~~~d~------------~~~~i~~~d~~~~~~~~~~~--------------~~~~~~i~~~~dG~-l 67 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDI------------PAKKVCRWDSFTKQVQRVTM--------------DAPVSSVALRQSGG-Y 67 (297)
T ss_dssp EEEEEEETTTTEEEEEET------------TTTEEEEEETTTCCEEEEEC--------------SSCEEEEEEBTTSS-E
T ss_pred ccCCeEECCCCEEEEEEC------------CCCEEEEEECCCCcEEEEeC--------------CCceEEEEECCCCC-E
Confidence 369999999999988852 24678999988766543321 12456889999988 2
Q ss_pred EEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc-----cceeccceeCCCCcEEEEEeecC-------CccE
Q 012630 175 LYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL-----DLRFRGVSWCDDSLALVQETWFK-------TTQT 242 (459)
Q Consensus 175 l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~-----~~~~~~~~Ws~D~~al~~~~~~~-------~~~~ 242 (459)
|+.. .+.|+.++. .+++.+.+... ..+...+.+++||..++...... ....
T Consensus 68 --~v~~------------~~~l~~~d~---~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 68 --VATI------------GTKFCALNW---KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp --EEEE------------TTEEEEEET---TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred --EEEE------------CCeEEEEEC---CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 3322 125777766 44355555432 12356688899987666543211 2456
Q ss_pred EEEEEcCC
Q 012630 243 RTWLISPG 250 (459)
Q Consensus 243 ~ly~v~~~ 250 (459)
.||+++++
T Consensus 131 ~l~~~d~~ 138 (297)
T 3g4e_A 131 ALYSLFPD 138 (297)
T ss_dssp EEEEECTT
T ss_pred EEEEEECC
Confidence 89999875
No 123
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.57 E-value=0.033 Score=54.41 Aligned_cols=131 Identities=9% Similarity=0.063 Sum_probs=78.3
Q ss_pred hhcceEEEcC-CCcee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccccc
Q 012630 73 TTTQLVLATL-DGTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELPLV 148 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p~~ 148 (459)
..+.|.++++ +++.. .+. ....+..+.|||||++|+..+. ...+.+||+..+. +..+..
T Consensus 225 ~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~~~~~~~---- 287 (425)
T 1r5m_A 225 PKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD-------------DGTLRIWHGGNGNSQNCFYG---- 287 (425)
T ss_dssp GGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET-------------TSCEEEECSSSBSCSEEECC----
T ss_pred CCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC-------------CCEEEEEECCCCccceEecC----
Confidence 3467788887 55433 333 3455679999999998877752 3678999976433 333321
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc-ccceeccceeCCC
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK-LDLRFRGVSWCDD 227 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~-~~~~~~~~~Ws~D 227 (459)
-...+..+.|+||+ .|+ +... ...|++++. ..++...... .......+.|++|
T Consensus 288 ---------~~~~i~~~~~~~~~--~l~-~~~~-----------d~~i~i~d~---~~~~~~~~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 288 ---------HSQSIVSASWVGDD--KVI-SCSM-----------DGSVRLWSL---KQNTLLALSIVDGVPIFAGRISQD 341 (425)
T ss_dssp ---------CSSCEEEEEEETTT--EEE-EEET-----------TSEEEEEET---TTTEEEEEEECTTCCEEEEEECTT
T ss_pred ---------CCccEEEEEECCCC--EEE-EEeC-----------CCcEEEEEC---CCCcEeEecccCCccEEEEEEcCC
Confidence 12356789999998 333 3222 225666766 3224333322 2445677899999
Q ss_pred CcEEEEEeecCCccEEEEEEc
Q 012630 228 SLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 228 ~~al~~~~~~~~~~~~ly~v~ 248 (459)
+..|+... .++..++|.+.
T Consensus 342 ~~~l~~~~--~dg~i~i~~~~ 360 (425)
T 1r5m_A 342 GQKYAVAF--MDGQVNVYDLK 360 (425)
T ss_dssp SSEEEEEE--TTSCEEEEECH
T ss_pred CCEEEEEE--CCCeEEEEECC
Confidence 86666544 24555666554
No 124
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.55 E-value=0.24 Score=45.71 Aligned_cols=138 Identities=18% Similarity=0.144 Sum_probs=85.2
Q ss_pred hhcceEEEcCC-CceeecCCC--ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccc
Q 012630 73 TTTQLVLATLD-GTVKEFGPP--AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVE 149 (459)
Q Consensus 73 ~~sqL~~v~~~-G~~~~l~~~--~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~ 149 (459)
....|++++++ +..+.+... .....+.++|++++|.++.. ....+++++.+|...+.+....
T Consensus 56 ~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~------------~~~~I~~~~~~g~~~~~~~~~~--- 120 (267)
T 1npe_A 56 SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS------------QLDRIEVAKMDGTQRRVLFDTG--- 120 (267)
T ss_dssp TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET------------TTTEEEEEETTSCSCEEEECSS---
T ss_pred CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC------------CCCEEEEEEcCCCCEEEEEECC---
Confidence 34678888884 444444322 23468899999998877642 2357888998876555443211
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccceeCCCC
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSWCDDS 228 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~Ws~D~ 228 (459)
...++.+...|++. .|||+.... ....|+.++. +|...+.+.... ..-.++++++|+
T Consensus 121 ---------~~~P~~i~vd~~~g-~lyv~~~~~---------~~~~I~~~~~---dg~~~~~~~~~~~~~P~gia~d~~~ 178 (267)
T 1npe_A 121 ---------LVNPRGIVTDPVRG-NLYWTDWNR---------DNPKIETSHM---DGTNRRILAQDNLGLPNGLTFDAFS 178 (267)
T ss_dssp ---------CSSEEEEEEETTTT-EEEEEECCS---------SSCEEEEEET---TSCCCEEEECTTCSCEEEEEEETTT
T ss_pred ---------CCCccEEEEeeCCC-EEEEEECCC---------CCcEEEEEec---CCCCcEEEEECCCCCCcEEEEcCCC
Confidence 13567899999887 788875311 1246777777 663444443222 224568898875
Q ss_pred -cEEEEEeecCCccEEEEEEcCCC
Q 012630 229 -LALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 229 -~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
.+++.+. ....|+++++++
T Consensus 179 ~~lyv~d~----~~~~I~~~~~~g 198 (267)
T 1npe_A 179 SQLCWVDA----GTHRAECLNPAQ 198 (267)
T ss_dssp TEEEEEET----TTTEEEEEETTE
T ss_pred CEEEEEEC----CCCEEEEEecCC
Confidence 5555543 223688898864
No 125
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.55 E-value=0.087 Score=49.94 Aligned_cols=128 Identities=16% Similarity=0.161 Sum_probs=77.8
Q ss_pred CCceeecCCC-ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccc
Q 012630 83 DGTVKEFGPP-AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREG 161 (459)
Q Consensus 83 ~G~~~~l~~~-~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~ 161 (459)
+++++.|... ....++.|+|||++|+++... ...+++|+.+|+ ...+... ...
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~------------~~~i~~~~~~g~-~~~~~~~-------------~~~ 87 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLV------------GRRVLGWREDGT-VDVLLDA-------------TAF 87 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETT------------TTEEEEEETTSC-EEEEEES-------------CSC
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECC------------CCEEEEEeCCCC-EEEEeCC-------------CCc
Confidence 4566666654 334689999999999888532 356888888654 3333321 124
Q ss_pred eeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc-c----ceeccceeCCCCcEEEEEee
Q 012630 162 MRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL-D----LRFRGVSWCDDSLALVQETW 236 (459)
Q Consensus 162 ~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~-~----~~~~~~~Ws~D~~al~~~~~ 236 (459)
+..+.|++||. |+... .+ ...|+.++. +| +.+.+... . .....+.+++||..++.+..
T Consensus 88 ~~gl~~d~dG~--l~v~~---~~--------~~~v~~~~~---~g-~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~ 150 (305)
T 3dr2_A 88 TNGNAVDAQQR--LVHCE---HG--------RRAITRSDA---DG-QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPP 150 (305)
T ss_dssp EEEEEECTTSC--EEEEE---TT--------TTEEEEECT---TS-CEEEEECEETTEECSCCCCEEECTTSCEEEECCS
T ss_pred cceeeECCCCC--EEEEE---CC--------CCEEEEECC---CC-CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcC
Confidence 56789999987 33221 11 235777776 54 66655432 1 12345888999877665321
Q ss_pred c-------------CCccEEEEEEcCCCCC
Q 012630 237 F-------------KTTQTRTWLISPGSKD 253 (459)
Q Consensus 237 ~-------------~~~~~~ly~v~~~~~~ 253 (459)
+ +.....||++++++++
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~ 180 (305)
T 3dr2_A 151 FGLRKPSQGCPADPELAHHSVYRLPPDGSP 180 (305)
T ss_dssp GGGSCGGGSCCCCCSSSCEEEEEECSSSCC
T ss_pred CCccccccccccccccCCCeEEEEcCCCCc
Confidence 1 0124689999987554
No 126
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.49 E-value=0.05 Score=53.52 Aligned_cols=138 Identities=13% Similarity=0.018 Sum_probs=79.1
Q ss_pred hhcceEEEcC-CCcee-ec--C-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccc
Q 012630 73 TTTQLVLATL-DGTVK-EF--G-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELP 146 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~-~l--~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p 146 (459)
..+.|.++|+ +|+.. .+ . ....+..+.|||||++|+..+. ...+.+||+..+. +..+...
T Consensus 152 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~~~~~~~~~- 217 (402)
T 2aq5_A 152 CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR-------------DKRVRVIEPRKGTVVAEKDRP- 217 (402)
T ss_dssp TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET-------------TSEEEEEETTTTEEEEEEECS-
T ss_pred CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec-------------CCcEEEEeCCCCceeeeeccC-
Confidence 3457888888 66544 44 2 3556789999999999988763 3678999987443 3333111
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCC-CCceEecc--ccceeccce
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG-EEPEILHK--LDLRFRGVS 223 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g-~~~~~L~~--~~~~~~~~~ 223 (459)
.. ...+..+.|+||+. .|+... .... ...|.+++. .. ..+..+.. .......+.
T Consensus 218 -~~---------~~~~~~~~~~~~~~-~l~~g~-~~~~--------d~~i~iwd~---~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 218 -HE---------GTRPVHAVFVSEGK-ILTTGF-SRMS--------ERQVALWDT---KHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp -SC---------SSSCCEEEECSTTE-EEEEEE-CTTC--------CEEEEEEET---TBCSSCSEEEECCCCSSCEEEE
T ss_pred -CC---------CCcceEEEEcCCCc-EEEEec-cCCC--------CceEEEEcC---ccccCCceEEeccCCCceeEEE
Confidence 00 11245789999977 444221 1011 235666666 32 12222222 233356689
Q ss_pred eCCCCcEEEEEeecCCccEEEEEEc
Q 012630 224 WCDDSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 224 Ws~D~~al~~~~~~~~~~~~ly~v~ 248 (459)
|++|+..|+.... .++..++|.+.
T Consensus 275 ~s~~~~~l~~~g~-~dg~i~i~d~~ 298 (402)
T 2aq5_A 275 FDPDTNIVYLCGK-GDSSIRYFEIT 298 (402)
T ss_dssp EETTTTEEEEEET-TCSCEEEEEEC
T ss_pred EcCCCCEEEEEEc-CCCeEEEEEec
Confidence 9999755543321 24556677664
No 127
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.48 E-value=0.45 Score=46.32 Aligned_cols=137 Identities=10% Similarity=0.053 Sum_probs=85.7
Q ss_pred hhcceEEEcCCC-ceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 73 TTTQLVLATLDG-TVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 73 ~~sqL~~v~~~G-~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
...+|.++++.| +...+.. ......+.|+|++++|.++-. ....|+.++++|+....+....+
T Consensus 51 ~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~------------~~~~I~r~~~~g~~~~~~~~~~~--- 115 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV------------TLDRILRANLNGSNVEEVVSTGL--- 115 (349)
T ss_dssp CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEET------------TTTEEEEEETTSCSCEEEECSSC---
T ss_pred cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEec------------cCCceEEEecCCCCceEEEeCCC---
Confidence 456789999944 5554433 334568999999999977742 23678889988876555433211
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccceeCCC-C
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSWCDD-S 228 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~Ws~D-~ 228 (459)
..+..+...+.+. .|||+... .+.|++++. +|...+.+.... ..-.+++..++ +
T Consensus 116 ---------~~p~glavd~~~g-~ly~~d~~-----------~~~I~~~~~---dG~~~~~l~~~~l~~P~~iavdp~~g 171 (349)
T 3v64_C 116 ---------ESPGGLAVDWVHD-KLYWTDSG-----------TSRIEVANL---DGAHRKVLLWQSLEKPRAIALHPMEG 171 (349)
T ss_dssp ---------SCCCEEEEETTTT-EEEEEETT-----------TTEEEEEET---TSCSCEEEECTTCSCEEEEEEETTTT
T ss_pred ---------CCccEEEEecCCC-eEEEEcCC-----------CCeEEEEcC---CCCceEEEEeCCCCCcceEEEecCcC
Confidence 1334667777666 88988531 346888887 764445554322 23456778875 5
Q ss_pred cEEEEEeecCCccEEEEEEcCCC
Q 012630 229 LALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
..++.+. ....+|+++++++
T Consensus 172 ~ly~td~---~~~~~I~r~~~dG 191 (349)
T 3v64_C 172 TIYWTDW---GNTPRIEASSMDG 191 (349)
T ss_dssp EEEEEEC---SSSCEEEEEETTS
T ss_pred eEEEecc---CCCCEEEEEeCCC
Confidence 5554432 1236799999874
No 128
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.48 E-value=0.72 Score=45.94 Aligned_cols=136 Identities=12% Similarity=0.135 Sum_probs=73.3
Q ss_pred ceEEEcC-CCceeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeecccccccccc
Q 012630 76 QLVLATL-DGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCELPLVENIPI 153 (459)
Q Consensus 76 qL~~v~~-~G~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~p~~~~~P~ 153 (459)
.|.++++ +|..+.+........+.|+|||++|++.... ....+++++..++.. +.+.....
T Consensus 153 ~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~-----------~~~~I~~~d~~~~~~~~~~g~~~~------ 215 (409)
T 3hrp_A 153 RVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWE-----------GTHTVYVYMKASGWAPTRIGQLGS------ 215 (409)
T ss_dssp EEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSS-----------TTCEEEEEEGGGTTCEEEEEECCT------
T ss_pred cEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecC-----------CCceEEEEEcCCCceeEEeeeccc------
Confidence 4555555 4444443322222228999999988666421 112688888764432 33322111
Q ss_pred cccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEe----ccccceec---cceeCC
Q 012630 154 AYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEIL----HKLDLRFR---GVSWCD 226 (459)
Q Consensus 154 ~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L----~~~~~~~~---~~~Ws~ 226 (459)
.....++.+.++|++. .||+.. . ...|+.++. +++....+ ........ +++|++
T Consensus 216 ---~~~~~p~~iav~p~~g-~lyv~d---~---------~~~I~~~d~---~~~~~~~~~~~~~~g~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 216 ---TFSGKIGAVALDETEE-WLYFVD---S---------NKNFGRFNV---KTQEVTLIKQLELSGSLGTNPGPYLIYYF 276 (409)
T ss_dssp ---TSCSCCCBCEECTTSS-EEEEEC---T---------TCEEEEEET---TTCCEEEEEECCCCSCCCCSSCCEEEEET
T ss_pred ---hhcCCcEEEEEeCCCC-eEEEEE---C---------CCcEEEEEC---CCCCEEEEecccccCCCCCCccccEEEeC
Confidence 0123556789999655 566531 1 236777776 54343333 11111122 788998
Q ss_pred C-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 227 D-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 227 D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
+ +.+++.+. ....|+++++++
T Consensus 277 ~~g~lyv~d~----~~~~I~~~~~~g 298 (409)
T 3hrp_A 277 VDSNFYMSDQ----NLSSVYKITPDG 298 (409)
T ss_dssp TTTEEEEEET----TTTEEEEECTTC
T ss_pred CCCEEEEEeC----CCCEEEEEecCC
Confidence 5 66666653 233689998763
No 129
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.47 E-value=0.13 Score=49.52 Aligned_cols=120 Identities=8% Similarity=-0.031 Sum_probs=74.5
Q ss_pred ceeecCCCc--eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccce
Q 012630 85 TVKEFGPPA--IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGM 162 (459)
Q Consensus 85 ~~~~l~~~~--~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~ 162 (459)
+++.+.... .-.++.|+||++.|+++... ...|+++|.+++..+.+.. + ..+
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~------------~~~i~~~d~~~~~~~~~~~-~-------------~~v 92 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNIL------------ERELHELHLASGRKTVHAL-P-------------FMG 92 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGG------------GTEEEEEETTTTEEEEEEC-S-------------SCE
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECC------------CCEEEEEECCCCcEEEEEC-C-------------Ccc
Confidence 344444422 23689999999999888532 3578999998877654422 1 245
Q ss_pred eeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-----ceeccceeCCCCcEEEEEeec
Q 012630 163 RLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-----LRFRGVSWCDDSLALVQETWF 237 (459)
Q Consensus 163 r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-----~~~~~~~Ws~D~~al~~~~~~ 237 (459)
..+.|+|||. .++ .. .+.|+.++. .+++.+.+.... .+...+.+++||..++.....
T Consensus 93 ~~i~~~~dg~-l~v--~~------------~~gl~~~d~---~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~ 154 (326)
T 2ghs_A 93 SALAKISDSK-QLI--AS------------DDGLFLRDT---ATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGR 154 (326)
T ss_dssp EEEEEEETTE-EEE--EE------------TTEEEEEET---TTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEET
T ss_pred eEEEEeCCCe-EEE--EE------------CCCEEEEEC---CCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCC
Confidence 6789999987 333 22 123777776 444665554321 235668899998666654321
Q ss_pred --CCccEEEEEEc
Q 012630 238 --KTTQTRTWLIS 248 (459)
Q Consensus 238 --~~~~~~ly~v~ 248 (459)
+.....||+++
T Consensus 155 ~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 155 KAETGAGSIYHVA 167 (326)
T ss_dssp TCCTTCEEEEEEE
T ss_pred cCCCCceEEEEEe
Confidence 12456899998
No 130
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.47 E-value=0.059 Score=51.90 Aligned_cols=128 Identities=11% Similarity=0.154 Sum_probs=74.0
Q ss_pred cceEEEcC-CCcee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeeccccccc
Q 012630 75 TQLVLATL-DGTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~~~~ 150 (459)
+.|.+.|+ +|+.. .+. ..+.+..+.|||||++|+..+. ...+.+||+..+ .+..+..
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~-------------d~~v~~wd~~~~~~~~~~~~------ 224 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC-------------DASAKLWDVREGMCRQTFTG------ 224 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-------------TSCEEEEETTTCSEEEEECC------
T ss_pred CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC-------------CCcEEEEECCCCeeEEEEcC------
Confidence 45666777 56433 343 3455689999999998876652 367899997643 3333322
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc---ceeccceeCCC
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD---LRFRGVSWCDD 227 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~---~~~~~~~Ws~D 227 (459)
-...+..+.|+||+. .|+-. ..| ..|.+++. ..++........ .....+.|++|
T Consensus 225 -------h~~~v~~v~~~p~~~-~l~s~-s~d-----------~~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 225 -------HESDINAICFFPNGN-AFATG-SDD-----------ATCRLFDL---RADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp -------CSSCEEEEEECTTSS-EEEEE-ETT-----------SCEEEEET---TTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred -------CcCCEEEEEEcCCCC-EEEEE-cCC-----------CcEEEEEC---CCCcEEEEEccCCcccceEEEEECCC
Confidence 123567899999998 55532 222 23555555 321222221111 23556899999
Q ss_pred CcEEEEEeecCCccEEEEE
Q 012630 228 SLALVQETWFKTTQTRTWL 246 (459)
Q Consensus 228 ~~al~~~~~~~~~~~~ly~ 246 (459)
+..|+... .++..++|-
T Consensus 282 g~~l~~g~--~d~~i~vwd 298 (340)
T 1got_B 282 GRLLLAGY--DDFNCNVWD 298 (340)
T ss_dssp SSEEEEEE--TTSEEEEEE
T ss_pred CCEEEEEC--CCCeEEEEE
Confidence 87777654 244445554
No 131
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.43 E-value=0.11 Score=49.69 Aligned_cols=134 Identities=14% Similarity=0.193 Sum_probs=77.0
Q ss_pred hcceEEEcC-CCc---eeecC-CCceeeecccCCC--CCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeecc
Q 012630 74 TTQLVLATL-DGT---VKEFG-PPAIYTAVEPSPD--QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCEL 145 (459)
Q Consensus 74 ~sqL~~v~~-~G~---~~~l~-~~~~~~~~~~SPD--G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~ 145 (459)
.+.|.++++ +++ ...+. ....+..+.|+|+ |++|+..+. ...+.+||+..... ..+.-
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-------------d~~i~v~d~~~~~~~~~~~~- 143 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-------------DGKVSVVEFKENGTTSPIII- 143 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-------------TSEEEEEECCTTSCCCEEEE-
T ss_pred CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC-------------CCcEEEEecCCCCceeeEEe-
Confidence 356778888 664 22333 3456789999999 998888763 36789999865421 11111
Q ss_pred cccccccccccccccceeeeEEec-------------CCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCC-ceE
Q 012630 146 PLVENIPIAYNSVREGMRLISWRA-------------DRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE-PEI 211 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~Wsp-------------Dg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~-~~~ 211 (459)
..-...+..+.|+| |+. .|+.. ..| ..|++++. ..+. ...
T Consensus 144 ----------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~-~~d-----------g~i~i~d~---~~~~~~~~ 197 (379)
T 3jrp_A 144 ----------DAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTG-GAD-----------NLVKIWKY---NSDAQTYV 197 (379)
T ss_dssp ----------ECCTTCEEEEEECCCC----------CTTC-EEEEE-ETT-----------SCEEEEEE---ETTTTEEE
T ss_pred ----------cCCCCceEEEEEcCccccccccccCCCCCC-EEEEE-eCC-----------CeEEEEEe---cCCCccee
Confidence 11233567889999 555 44432 222 23555544 2112 211
Q ss_pred e----ccccceeccceeCCC---CcEEEEEeecCCccEEEEEEcC
Q 012630 212 L----HKLDLRFRGVSWCDD---SLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 212 L----~~~~~~~~~~~Ws~D---~~al~~~~~~~~~~~~ly~v~~ 249 (459)
+ .........+.|++| +..|+... .++..++|.+..
T Consensus 198 ~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~--~dg~i~iwd~~~ 240 (379)
T 3jrp_A 198 LESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIWTQDN 240 (379)
T ss_dssp EEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESS
T ss_pred eEEEEecccCcEeEEEECCCCCCCCeEEEEe--CCCEEEEEeCCC
Confidence 2 112334567899999 66666544 246677777754
No 132
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.42 E-value=0.028 Score=55.09 Aligned_cols=132 Identities=8% Similarity=0.102 Sum_probs=72.5
Q ss_pred cceEEEcC-CCc----eeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC----c-eeeeeec
Q 012630 75 TQLVLATL-DGT----VKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG----K-FVRQLCE 144 (459)
Q Consensus 75 sqL~~v~~-~G~----~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g----~-~~~~lt~ 144 (459)
+.|.++++ +++ ...+.....+..+.|||||++|+..+. ...+.+|++.. . .+..+..
T Consensus 45 ~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------dg~v~vw~~~~~~~~~~~~~~~~~ 111 (416)
T 2pm9_A 45 SSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALD-------------NGSLELYSTNEANNAINSMARFSN 111 (416)
T ss_dssp CCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEES-------------SSCEEEECCSSTTSCCCEEEECCC
T ss_pred CeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEcc-------------CCeEEEeecccccccccchhhccC
Confidence 34555555 442 122333456789999999999988753 36789998765 1 2332221
Q ss_pred ccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCC-------ceEe---cc
Q 012630 145 LPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE-------PEIL---HK 214 (459)
Q Consensus 145 ~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~-------~~~L---~~ 214 (459)
-...+..+.|+||+...|+ +...| ..|++++. ..++ ...+ ..
T Consensus 112 -------------h~~~v~~~~~~~~~~~~l~-s~~~d-----------g~v~iwd~---~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 112 -------------HSSSVKTVKFNAKQDNVLA-SGGNN-----------GEIFIWDM---NKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp -------------SSSCCCEEEECSSSTTBEE-EECSS-----------SCEEBCBT---TTTSSCTTTCCCBCCCCSCC
T ss_pred -------------CccceEEEEEcCCCCCEEE-EEcCC-----------CeEEEEEC---CCCccccccccccccccccC
Confidence 1235568999999543555 32221 24666666 3222 1111 11
Q ss_pred ccceeccceeCCC-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 215 LDLRFRGVSWCDD-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 215 ~~~~~~~~~Ws~D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
.......+.|+++ +..|+.... ++. +.++++.+
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~--dg~--v~iwd~~~ 197 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGS--SNF--ASIWDLKA 197 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESS--SSC--EEEEETTT
T ss_pred CCCCeeEEEeCCCCCcEEEEEcC--CCC--EEEEECCC
Confidence 2334566899998 566665432 333 44445443
No 133
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.39 E-value=0.043 Score=54.35 Aligned_cols=119 Identities=8% Similarity=0.199 Sum_probs=67.4
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
...+..++|||||++|+.. . ...+.+||+. ++....+... .|..+......+..+.|+|+
T Consensus 177 ~~~v~~~~~~~~~~~l~s~-~-------------d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~p~ 237 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA-D-------------DLRINLWHLEITDRSFNIVDI-----KPANMEELTEVITAAEFHPN 237 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE-C-------------SSEEEEEETTEEEEEEEEEEC-----CCSSGGGCCCCEEEEEECSS
T ss_pred CcceEEEEEcCCCCEEEEe-C-------------CCeEEEEECCCCCceeeeeec-----ccccccccCcceEEEEECCC
Confidence 4456789999999988754 2 2678999987 4433332211 11122233456789999999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-----eEeccccc------------eeccceeCCCCcEEEE
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-----EILHKLDL------------RFRGVSWCDDSLALVQ 233 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-----~~L~~~~~------------~~~~~~Ws~D~~al~~ 233 (459)
++..|+.. ..|+ .|.+++. ..++. +.+..... ....+.|++|+..|+.
T Consensus 238 ~~~~l~s~-~~dg-----------~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 238 SCNTFVYS-SSKG-----------TIRLCDM---RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp CTTEEEEE-ETTS-----------CEEEEET---TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred CCcEEEEE-eCCC-----------eEEEEEC---cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE
Confidence 95355533 2222 3555554 22232 33322221 5677899999877775
Q ss_pred EeecCCccEEEEEE
Q 012630 234 ETWFKTTQTRTWLI 247 (459)
Q Consensus 234 ~~~~~~~~~~ly~v 247 (459)
.. + +..++|-+
T Consensus 303 ~~--~-~~v~iwd~ 313 (447)
T 3dw8_B 303 RD--Y-LSVKVWDL 313 (447)
T ss_dssp EE--S-SEEEEEET
T ss_pred ee--C-CeEEEEeC
Confidence 54 2 44445544
No 134
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.037 Score=57.94 Aligned_cols=108 Identities=10% Similarity=0.154 Sum_probs=62.6
Q ss_pred eeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee--------eeeecccccccccccccccccceeeeE
Q 012630 95 YTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV--------RQLCELPLVENIPIAYNSVREGMRLIS 166 (459)
Q Consensus 95 ~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~--------~~lt~~p~~~~~P~~~~~~~~~~r~~~ 166 (459)
+..++|||||++||..+. ...+.|||+.++.. +.+.... . +-...+..+.
T Consensus 132 v~svafSPDG~~LAsgs~-------------DGtVkIWd~~~~~l~~~~~i~l~ti~~~~-~--------gh~~~V~sVa 189 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNE-------------DGELQFFSIRKNSENTPEFYFESSIRLSD-A--------GSKDWVTHIV 189 (588)
T ss_dssp EEEEEECSSSSCEEEEET-------------TSEEEEEECCCCTTTCCCCEEEEEEECSC-T--------TCCCCEEEEE
T ss_pred EEEEEEcCCCCEEEEEcC-------------CCEEEEEECCCCccccccceeeeeeeccc-c--------cccccEEEEE
Confidence 678999999999998863 47889999887632 2221100 0 0123567899
Q ss_pred EecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc----eEec-cccceeccceeCCCCcEEEEEeecCCcc
Q 012630 167 WRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP----EILH-KLDLRFRGVSWCDDSLALVQETWFKTTQ 241 (459)
Q Consensus 167 WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~----~~L~-~~~~~~~~~~Ws~D~~al~~~~~~~~~~ 241 (459)
||||| |+-. .. | ..++.+++ .+++. +.|. ........++|+ + ..|+... ++.
T Consensus 190 wSPdg---Laas-s~---D--------~tVrlWd~---~~~~~~~~~~tL~~~h~~~V~svaFs-g-~~LASa~---~~t 246 (588)
T 2j04_A 190 WYEDV---LVAA-LS---N--------NSVFSMTV---SASSHQPVSRMIQNASRRKITDLKIV-D-YKVVLTC---PGY 246 (588)
T ss_dssp EETTE---EEEE-ET---T--------CCEEEECC---CSSSSCCCEEEEECCCSSCCCCEEEE-T-TEEEEEC---SSE
T ss_pred EcCCc---EEEE-eC---C--------CeEEEEEC---CCCccccceeeecccccCcEEEEEEE-C-CEEEEEe---CCe
Confidence 99998 4322 11 1 24667776 54342 2242 222346778999 4 4444433 234
Q ss_pred EEEEEE
Q 012630 242 TRTWLI 247 (459)
Q Consensus 242 ~~ly~v 247 (459)
.++|.+
T Consensus 247 IkLWd~ 252 (588)
T 2j04_A 247 VHKIDL 252 (588)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 455543
No 135
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.30 E-value=0.75 Score=46.29 Aligned_cols=93 Identities=14% Similarity=0.035 Sum_probs=52.6
Q ss_pred cceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeecccccccc
Q 012630 75 TQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLVENI 151 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~~~~ 151 (459)
..|.++|+ ++++. .+..+... .+.+||||++|++......... .......+.++|... +.++.|. ++. ..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~---~G~~~~~VsviD~~t~~vv~~I~-v~g-~~- 171 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIA---RGKRTDYVEVFDPVTFLPIADIE-LPD-AP- 171 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETT---EEEEEEEEEEECTTTCCEEEEEE-ETT-CC-
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccc---cCCCCCEEEEEECCCCcEEEEEE-CCC-cc-
Confidence 68999998 77655 33333333 7999999999977742100000 000124688999764 4444442 110 00
Q ss_pred cccccccccceeeeEEecCCCceEEEE
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWV 178 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~ 178 (459)
.+ .+...++.+.++|||+ +||..
T Consensus 172 --r~-~~g~~P~~~~~spDGk-~lyV~ 194 (426)
T 3c75_H 172 --RF-LVGTYQWMNALTPDNK-NLLFY 194 (426)
T ss_dssp --CC-CBSCCGGGSEECTTSS-EEEEE
T ss_pred --cc-ccCCCcceEEEcCCCC-EEEEE
Confidence 00 0123567899999999 66654
No 136
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.28 E-value=0.043 Score=52.81 Aligned_cols=132 Identities=8% Similarity=0.060 Sum_probs=76.4
Q ss_pred hhcceEEEcC-CCc-eeecC--CCceeeecccCC--CCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccc
Q 012630 73 TTTQLVLATL-DGT-VKEFG--PPAIYTAVEPSP--DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELP 146 (459)
Q Consensus 73 ~~sqL~~v~~-~G~-~~~l~--~~~~~~~~~~SP--DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p 146 (459)
..+++.+.++ +++ .+.+. ..+.+..++|+| +|++|+..+. ...+.+||+..+....+....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~-------------dg~i~~wd~~~~~~~~~~~~~ 168 (343)
T 3lrv_A 102 PGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADN-------------RGTIGFQSYEDDSQYIVHSAK 168 (343)
T ss_dssp TTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEET-------------TCCEEEEESSSSCEEEEECCC
T ss_pred ccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeC-------------CCcEEEEECCCCcEEEEEecC
Confidence 3345555666 555 33333 234568999999 9999877753 367899998765553332211
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc--eEecc-ccceeccce
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP--EILHK-LDLRFRGVS 223 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~--~~L~~-~~~~~~~~~ 223 (459)
....+..+.|+|||. .|+- ...| ..|.+++. ..++. ..+.. -......+.
T Consensus 169 -----------~~~~i~~~~~~pdg~-~las-g~~d-----------g~i~iwd~---~~~~~~~~~~~~~h~~~v~~l~ 221 (343)
T 3lrv_A 169 -----------SDVEYSSGVLHKDSL-LLAL-YSPD-----------GILDVYNL---SSPDQASSRFPVDEEAKIKEVK 221 (343)
T ss_dssp -----------SSCCCCEEEECTTSC-EEEE-ECTT-----------SCEEEEES---SCTTSCCEECCCCTTSCEEEEE
T ss_pred -----------CCCceEEEEECCCCC-EEEE-EcCC-----------CEEEEEEC---CCCCCCccEEeccCCCCEEEEE
Confidence 112356889999988 4442 1211 24666665 32233 23432 244567789
Q ss_pred eCCCCcEEEEEeecCCccEEEEEE
Q 012630 224 WCDDSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 224 Ws~D~~al~~~~~~~~~~~~ly~v 247 (459)
|++|+..|+... +. ..++|-+
T Consensus 222 fs~~g~~l~s~~--~~-~v~iwd~ 242 (343)
T 3lrv_A 222 FADNGYWMVVEC--DQ-TVVCFDL 242 (343)
T ss_dssp ECTTSSEEEEEE--SS-BEEEEET
T ss_pred EeCCCCEEEEEe--CC-eEEEEEc
Confidence 999987777655 22 4455543
No 137
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.25 E-value=0.067 Score=57.07 Aligned_cols=74 Identities=14% Similarity=0.167 Sum_probs=47.5
Q ss_pred cceEEEcC-CCcee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccccccc
Q 012630 75 TQLVLATL-DGTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p~~~~ 150 (459)
+.|.+.|+ +++.. .+. ..+.+..++|||||++|+..+. ...+.+||+..+. +..+..
T Consensus 541 ~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~-------------Dg~i~iwd~~~~~~~~~~~~------ 601 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK-------------DGVVLLWDLAEGKKLYSLEA------ 601 (694)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------------TSBCEEEETTTTEEEECCBC------
T ss_pred CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC-------------CCeEEEEECCCCceEEEecC------
Confidence 45666676 55443 333 3455689999999999877753 3678999986443 322211
Q ss_pred ccccccccccceeeeEEecCCCceEE
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLY 176 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~ 176 (459)
...+..+.|+||+. .|+
T Consensus 602 --------~~~v~~~~~sp~~~-~l~ 618 (694)
T 3dm0_A 602 --------NSVIHALCFSPNRY-WLC 618 (694)
T ss_dssp --------SSCEEEEEECSSSS-EEE
T ss_pred --------CCcEEEEEEcCCCc-EEE
Confidence 12456889999987 444
No 138
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.25 E-value=0.035 Score=54.68 Aligned_cols=141 Identities=16% Similarity=0.208 Sum_probs=77.3
Q ss_pred hcceEEEcC--CCce----eecC-CCceeeecccCC-CCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecc
Q 012630 74 TTQLVLATL--DGTV----KEFG-PPAIYTAVEPSP-DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCEL 145 (459)
Q Consensus 74 ~sqL~~v~~--~G~~----~~l~-~~~~~~~~~~SP-DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~ 145 (459)
.+.|.++++ .|+. ..+. ..+.+..++||| ||++|+..+. ...+.|||+..+....-...
T Consensus 56 ~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~-------------dg~v~vw~~~~~~~~~~~~~ 122 (402)
T 2aq5_A 56 GGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE-------------DCTVMVWEIPDGGLVLPLRE 122 (402)
T ss_dssp SCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET-------------TSEEEEEECCTTCCSSCBCS
T ss_pred CCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC-------------CCeEEEEEccCCCCccccCC
Confidence 467777777 3322 1222 345678999999 8888877652 36789999764421100000
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-Ee--ccccceeccc
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-IL--HKLDLRFRGV 222 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L--~~~~~~~~~~ 222 (459)
+. ..+..-...+..+.|+|+++..|+ +...| ..|.+++. ..++.. .+ .........+
T Consensus 123 ~~-----~~~~~h~~~v~~~~~~p~~~~~l~-s~~~d-----------g~i~iwd~---~~~~~~~~~~~~~~~~~v~~~ 182 (402)
T 2aq5_A 123 PV-----ITLEGHTKRVGIVAWHPTAQNVLL-SAGCD-----------NVILVWDV---GTGAAVLTLGPDVHPDTIYSV 182 (402)
T ss_dssp CS-----EEEECCSSCEEEEEECSSBTTEEE-EEETT-----------SCEEEEET---TTTEEEEEECTTTCCSCEEEE
T ss_pred ce-----EEecCCCCeEEEEEECcCCCCEEE-EEcCC-----------CEEEEEEC---CCCCccEEEecCCCCCceEEE
Confidence 00 011112345678999999863444 33222 24666666 322333 23 2234446778
Q ss_pred eeCCCCcEEEEEeecCCccEEEEEEcCCC
Q 012630 223 SWCDDSLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 223 ~Ws~D~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
.|++|+..|+.... ++. +.++++.+
T Consensus 183 ~~~~~~~~l~~~~~--d~~--i~iwd~~~ 207 (402)
T 2aq5_A 183 DWSRDGALICTSCR--DKR--VRVIEPRK 207 (402)
T ss_dssp EECTTSSCEEEEET--TSE--EEEEETTT
T ss_pred EECCCCCEEEEEec--CCc--EEEEeCCC
Confidence 99999866665442 333 55556554
No 139
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.24 E-value=0.058 Score=51.03 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=69.9
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
.+.+..++|||||++|+..+. ...+.+||+..+ .++.+... ...++...|+||
T Consensus 13 ~~~V~~~~fsp~~~~l~s~~~-------------dg~v~lWd~~~~~~~~~~~~~-------------~~~v~~~~~~~~ 66 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVLTTLY-------------SGRVELWNYETQVEVRSIQVT-------------ETPVRAGKFIAR 66 (304)
T ss_dssp CSCEEEEEECSSSSEEEEEET-------------TSEEEEEETTTTEEEEEEECC-------------SSCEEEEEEEGG
T ss_pred CCceEEEEECCCCCEEEEEcC-------------CCcEEEEECCCCceeEEeecc-------------CCcEEEEEEeCC
Confidence 345679999999999987752 367899998744 34433221 234568899999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-eEeccccceeccceeCCCCcEEEEEeecCCccEEEEEEc
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-EILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~ 248 (459)
+. .|+-. ..| ..|.+++. ..++. ..+..-......+.|+|++..|+... .++..++|-+.
T Consensus 67 ~~-~l~s~-s~d-----------~~i~vwd~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs--~D~~v~lWd~~ 127 (304)
T 2ynn_A 67 KN-WIIVG-SDD-----------FRIRVFNY---NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWE 127 (304)
T ss_dssp GT-EEEEE-ETT-----------SEEEEEET---TTCCEEEEEECCSSCEEEEEECSSSSEEEEEE--TTSCEEEEEGG
T ss_pred CC-EEEEE-CCC-----------CEEEEEEC---CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEEC--CCCeEEEEECC
Confidence 88 55532 211 24666665 32233 23333344466789999987666554 24566677553
No 140
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.22 E-value=0.06 Score=51.85 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=37.7
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
...+..++|||||++|+..+. ...+.+||+. ......... ....+..+.|+||
T Consensus 213 ~~~v~~~~~s~~g~~l~sgs~-------------dg~v~iwd~~~~~~~~~~~~-------------~~~~v~~v~~sp~ 266 (343)
T 2xzm_R 213 ESNVNHLSISPNGKYIATGGK-------------DKKLLIWDILNLTYPQREFD-------------AGSTINQIAFNPK 266 (343)
T ss_dssp SSCEEEEEECTTSSEEEEEET-------------TCEEEEEESSCCSSCSEEEE-------------CSSCEEEEEECSS
T ss_pred cccceEEEECCCCCEEEEEcC-------------CCeEEEEECCCCcccceeec-------------CCCcEEEEEECCC
Confidence 445678999999999987753 3678999973 322111100 0123668999999
Q ss_pred CCceEE
Q 012630 171 RPSTLY 176 (459)
Q Consensus 171 g~~~l~ 176 (459)
+. .|+
T Consensus 267 ~~-~la 271 (343)
T 2xzm_R 267 LQ-WVA 271 (343)
T ss_dssp SC-EEE
T ss_pred CC-EEE
Confidence 87 444
No 141
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.17 E-value=0.12 Score=48.81 Aligned_cols=128 Identities=15% Similarity=0.177 Sum_probs=72.5
Q ss_pred ceEEEcC-CCcee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeecccccccc
Q 012630 76 QLVLATL-DGTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELPLVENI 151 (459)
Q Consensus 76 qL~~v~~-~G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p~~~~~ 151 (459)
.|.+.++ +++.. .+. ....+..+.|||||++|+..+. ...+.+||+.... +..+..
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-------------Dg~i~iwd~~~~~~~~~~~~------- 255 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK-------------DGQAMLWDLNEGKHLYTLDG------- 255 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-------------TCEEEEEETTTTEEEEEEEC-------
T ss_pred EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeC-------------CCeEEEEEeccCceeeeecC-------
Confidence 4556666 55433 232 3455678999999999877653 3678899987543 332221
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-Ee---------ccccceecc
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-IL---------HKLDLRFRG 221 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L---------~~~~~~~~~ 221 (459)
...+..+.|+|++. .+. . ..| ..|++++. .++... .+ ..-......
T Consensus 256 -------~~~v~~~~~~~~~~-~~~-~-~~d-----------~~i~iwd~---~~~~~~~~~~~~~~~~~~~~h~~~v~~ 311 (340)
T 4aow_A 256 -------GDIINALCFSPNRY-WLC-A-ATG-----------PSIKIWDL---EGKIIVDELKQEVISTSSKAEPPQCTS 311 (340)
T ss_dssp -------SSCEEEEEECSSSS-EEE-E-EET-----------TEEEEEET---TTTEEEEEECCC-------CCCCCEEE
T ss_pred -------CceEEeeecCCCCc-eee-c-cCC-----------CEEEEEEC---CCCeEEEeccccceeeeccCCCCCEEE
Confidence 12455789999876 333 1 211 13444444 221111 11 011223456
Q ss_pred ceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 222 VSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 222 ~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
++|++|+..|+... .++..++|.+..
T Consensus 312 l~~s~dg~~l~sgs--~Dg~v~iW~~~t 337 (340)
T 4aow_A 312 LAWSADGQTLFAGY--TDNLVRVWQVTI 337 (340)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEEEEC
T ss_pred EEECCCCCEEEEEe--CCCEEEEEeCCC
Confidence 89999987777654 356678887753
No 142
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.16 E-value=1.2 Score=44.22 Aligned_cols=139 Identities=9% Similarity=0.071 Sum_probs=80.2
Q ss_pred HHhhcceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce----eeeeec
Q 012630 71 HYTTTQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF----VRQLCE 144 (459)
Q Consensus 71 ~~~~sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~----~~~lt~ 144 (459)
+.....|.++++ ++....+.. ......+.|+++++.|.++-. ....|+.++++|.. ...+..
T Consensus 88 ~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~------------~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 88 FTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------------SQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp EEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEET------------TTTEEEEEEC------CCCEEEEC
T ss_pred EeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEec------------CCCeEEEEEcccCCCCCcceEEEe
Confidence 334578899999 445555443 344568999999999877742 23567788877632 222222
Q ss_pred ccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc-eeccce
Q 012630 145 LPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL-RFRGVS 223 (459)
Q Consensus 145 ~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~-~~~~~~ 223 (459)
. ....+..++..+.+. .|||+.. ....|++++. +|...+.+..... .-.+++
T Consensus 156 ~------------~~~~p~glavD~~~~-~lY~~d~-----------~~~~I~~~~~---~g~~~~~l~~~~~~~P~~ia 208 (400)
T 3p5b_L 156 R------------DIQAPDGLAVDWIHS-NIYWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIV 208 (400)
T ss_dssp S------------SCSCEEEEEEETTTT-EEEEEET-----------TTTEEEEECT---TTCSEEEEEECSSCCEEEEE
T ss_pred C------------CCCCcccEEEEecCC-ceEEEEC-----------CCCeEEEEeC---CCCceEEEEeCCCCCcceEE
Confidence 1 112444566666555 7888852 1347888888 7755555554222 234566
Q ss_pred eCCC-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 224 WCDD-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 224 Ws~D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
..+. +..++.+ | ....+|+++++++
T Consensus 209 vdp~~g~ly~td-~--~~~~~I~~~~~dG 234 (400)
T 3p5b_L 209 VDPVHGFMYWTD-W--GTPAKIKKGGLNG 234 (400)
T ss_dssp EETTTTEEEEEE-C--SSSCCEEEEETTS
T ss_pred EecccCeEEEEe-C--CCCCEEEEEeCCC
Confidence 7764 5554443 2 2234699998874
No 143
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.15 E-value=0.33 Score=48.06 Aligned_cols=137 Identities=15% Similarity=0.104 Sum_probs=84.2
Q ss_pred hhcceEEEcC-CCceeecCCCc--eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccc
Q 012630 73 TTTQLVLATL-DGTVKEFGPPA--IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVE 149 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~~~--~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~ 149 (459)
....|+++++ ++..+.+...+ ...++++.|.+..|.++-. ....|++++++|...+.+....
T Consensus 136 ~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~------------~~~~I~~~~~dg~~~~~l~~~~--- 200 (386)
T 3v65_B 136 TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS------------GTSRIEVANLDGAHRKVLLWQS--- 200 (386)
T ss_dssp TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEET------------TTTEEEECBTTSCSCEEEECSS---
T ss_pred CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcC------------CCCeEEEEeCCCCceEEeecCC---
Confidence 3456777777 33444433221 2246778888888877632 2356888888887655543321
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccce-eccceeCCC-
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLR-FRGVSWCDD- 227 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~-~~~~~Ws~D- 227 (459)
-..++.+...|++. .|||+... . ...|+.++. +|...+.+...... -.+++|+++
T Consensus 201 ---------l~~P~giavdp~~g-~ly~td~~---~-------~~~I~r~~~---dG~~~~~~~~~~~~~PnGlavd~~~ 257 (386)
T 3v65_B 201 ---------LEKPRAIALHPMEG-TIYWTDWG---N-------TPRIEASSM---DGSGRRIIADTHLFWPNGLTIDYAG 257 (386)
T ss_dssp ---------CSCEEEEEEETTTT-EEEEEECS---S-------SCEEEEEET---TSCSCEEEECSSCSCEEEEEEEGGG
T ss_pred ---------CCCCcEEEEEcCCC-eEEEeccC---C-------CCEEEEEeC---CCCCcEEEEECCCCCeeeEEEeCCC
Confidence 13567889999888 89988531 1 247888888 77555555443322 456889876
Q ss_pred CcEEEEEeecCCccEEEEEEcCCC
Q 012630 228 SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 228 ~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
+.+++.+. ...+|++++.++
T Consensus 258 ~~lY~aD~----~~~~I~~~d~dG 277 (386)
T 3v65_B 258 RRMYWVDA----KHHVIERANLDG 277 (386)
T ss_dssp TEEEEEET----TTTEEEEECTTS
T ss_pred CEEEEEEC----CCCEEEEEeCCC
Confidence 44444432 334799999864
No 144
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.15 E-value=0.47 Score=46.16 Aligned_cols=136 Identities=15% Similarity=0.102 Sum_probs=83.8
Q ss_pred hcceEEEcC-CCceeecCCC--ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 74 TTQLVLATL-DGTVKEFGPP--AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~~--~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
...|+++++ ++..+.+... ....++++.+.++.|.++-. ....|++++++|...+.+....
T Consensus 94 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~------------~~~~I~~~~~dG~~~~~l~~~~---- 157 (349)
T 3v64_C 94 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS------------GTSRIEVANLDGAHRKVLLWQS---- 157 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET------------TTTEEEEEETTSCSCEEEECTT----
T ss_pred CCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC------------CCCeEEEEcCCCCceEEEEeCC----
Confidence 456777777 3344443222 22346778888888877742 2357889999887655543311
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc-eeccceeCCC-C
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL-RFRGVSWCDD-S 228 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~-~~~~~~Ws~D-~ 228 (459)
-..++.+...|++. .|||+... . ...|+.++. +|...+.+..... .-.+++++++ +
T Consensus 158 --------l~~P~~iavdp~~g-~ly~td~~---~-------~~~I~r~~~---dG~~~~~~~~~~~~~PnGla~d~~~~ 215 (349)
T 3v64_C 158 --------LEKPRAIALHPMEG-TIYWTDWG---N-------TPRIEASSM---DGSGRRIIADTHLFWPNGLTIDYAGR 215 (349)
T ss_dssp --------CSCEEEEEEETTTT-EEEEEECS---S-------SCEEEEEET---TSCSCEESCCSSCSCEEEEEEETTTT
T ss_pred --------CCCcceEEEecCcC-eEEEeccC---C-------CCEEEEEeC---CCCCcEEEEECCCCCcceEEEeCCCC
Confidence 13567889999887 89988531 1 257888888 7755555544322 2456889876 4
Q ss_pred cEEEEEeecCCccEEEEEEcCCC
Q 012630 229 LALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
..++.+. ...+|+++++++
T Consensus 216 ~lY~aD~----~~~~I~~~~~dG 234 (349)
T 3v64_C 216 RMYWVDA----KHHVIERANLDG 234 (349)
T ss_dssp EEEEEET----TTTEEEEEETTS
T ss_pred EEEEEEC----CCCEEEEEeCCC
Confidence 4444432 234789998874
No 145
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.14 E-value=0.072 Score=51.25 Aligned_cols=133 Identities=5% Similarity=-0.009 Sum_probs=76.1
Q ss_pred hcceEEEcC-CCceeecC---CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-e-eeeecccc
Q 012630 74 TTQLVLATL-DGTVKEFG---PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-V-RQLCELPL 147 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~---~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~-~~lt~~p~ 147 (459)
.+.|.++|+ +|+...+. ....+..++|||||++|+..+. ...+.+||+..+. + ..+..
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~-------------dg~i~iwd~~~~~~~~~~~~~--- 211 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP-------------DGILDVYNLSSPDQASSRFPV--- 211 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT-------------TSCEEEEESSCTTSCCEECCC---
T ss_pred CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC-------------CCEEEEEECCCCCCCccEEec---
Confidence 456777888 66654432 2334678999999999877642 3678999986443 2 22211
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-eEecc---ccceec--c
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-EILHK---LDLRFR--G 221 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-~~L~~---~~~~~~--~ 221 (459)
. -...+..+.|+|||. .|+-.. + +.|.+++. ..++. ..+.. ...... .
T Consensus 212 ~---------h~~~v~~l~fs~~g~-~l~s~~--~-----------~~v~iwd~---~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 212 D---------EEAKIKEVKFADNGY-WMVVEC--D-----------QTVVCFDL---RKDVGTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp C---------TTSCEEEEEECTTSS-EEEEEE--S-----------SBEEEEET---TSSTTCBSSCCCBC-----CCEE
T ss_pred c---------CCCCEEEEEEeCCCC-EEEEEe--C-----------CeEEEEEc---CCCCcceeecccccccccccceE
Confidence 0 123567899999998 555332 1 13555555 22122 21211 111222 3
Q ss_pred ceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 222 VSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 222 ~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
+.|++++..|+.... .+...++|.++.
T Consensus 266 ~~~~~~g~~l~~~s~-~d~~i~v~~~~~ 292 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSN-ESNSLTIYKFDK 292 (343)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEEECT
T ss_pred EEECCCCCEEEEecC-CCCcEEEEEEcc
Confidence 899999877765331 145577887754
No 146
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.14 E-value=0.085 Score=51.35 Aligned_cols=133 Identities=11% Similarity=0.073 Sum_probs=70.5
Q ss_pred cceEEEcC-CCceeec------CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeeccc
Q 012630 75 TQLVLATL-DGTVKEF------GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCELP 146 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l------~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~p 146 (459)
+.|.+.|+ +|+.... +....+..++|||||++|+..+. ...+.+||+..+.. ..+..
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~-------------dg~v~iwd~~~~~~~~~~~~-- 179 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK-------------DFSVKVWDLSQKAVLKSYNA-- 179 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET-------------TSCEEEEETTTTEEEEEECC--
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC-------------CCeEEEEECCCCcEEEEEcC--
Confidence 45666666 5533211 22455678999999999977652 36789999875443 33321
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc---ccceeccce
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK---LDLRFRGVS 223 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~---~~~~~~~~~ 223 (459)
-...+..+.|+|+++..++ +...| ..|.+++. ..+++..... .......+.
T Consensus 180 -----------h~~~v~~v~~s~~~~~~~~-s~~~d-----------g~v~~wd~---~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 180 -----------HSSEVNCVAACPGKDTIFL-SCGED-----------GRILLWDT---RKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp -----------CSSCEEEEEECTTCSSCEE-EEETT-----------SCEEECCT---TSSSCBCBCCCTTCCSCEEEEE
T ss_pred -----------CCCCEEEEEEccCCCceee-eeccC-----------CceEEEEC---CCCceeeeeeeccccccccchh
Confidence 1234568899999984444 32222 24666665 3223322211 223355689
Q ss_pred eCCCC-cEEEEEeecCCccEEEEEEcCCCC
Q 012630 224 WCDDS-LALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 224 Ws~D~-~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
|+|++ ..|+... .+...++| ++.++
T Consensus 234 ~sp~~~~~la~g~--~d~~i~~w--d~~~~ 259 (357)
T 4g56_B 234 WHPEKDDTFACGD--ETGNVSLV--NIKNP 259 (357)
T ss_dssp ECTTSTTEEEEEE--SSSCEEEE--ESSCG
T ss_pred hhhcccceEEEee--cccceeEE--ECCCC
Confidence 99974 5555433 13334444 55443
No 147
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.13 E-value=0.24 Score=53.35 Aligned_cols=137 Identities=9% Similarity=0.074 Sum_probs=75.8
Q ss_pred hhcceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC----ceeeeeeccc
Q 012630 73 TTTQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG----KFVRQLCELP 146 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g----~~~~~lt~~p 146 (459)
....|.++++ +++...+.. ......+.|+|++.+|.++-. ....|++++++| .....+...
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~------------~~~~I~~~~~~g~~~~~~~~~~i~~- 450 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------------SQRMICSTQLDRAHGVSSYDTVISR- 450 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCT------------TTTSBEEEESCCCCC-CCCCCBCCS-
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEec------------CCCeEEEEecCCCCCCcceEEEEeC-
Confidence 3457888998 555655443 334468999999988866631 235678888776 222111110
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccceeC
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSWC 225 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~Ws 225 (459)
....+..+...+.+. .|||+.. ....|++++. +|...+.|.... ..-.++++.
T Consensus 451 -----------~~~~P~glavD~~~g-~LY~tD~-----------~~~~I~v~d~---dg~~~~~l~~~~~~~P~giavD 504 (699)
T 1n7d_A 451 -----------DIQAPDGLAVDWIHS-NIYWTDS-----------VLGTVSVADT---KGVKRKTLFREQGSKPRAIVVD 504 (699)
T ss_dssp -----------CC--CCCEECCCSSS-BCEECCT-----------TTSCEEEEBS---SSCCEEEECCCSSCCCCCEECC
T ss_pred -----------CCCCcceEEEEeeCC-cEEEEec-----------cCCeEEEEec---CCCceEEEEeCCCCCcceEEEc
Confidence 011233455555555 6777531 1346788877 664455554432 234567777
Q ss_pred CC-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 226 DD-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 226 ~D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
++ +.+++.+ + ....+|+++++++
T Consensus 505 p~~g~ly~td-~--~~~~~I~~~~~dG 528 (699)
T 1n7d_A 505 PVHGFMYWTD-W--GTPAKIKKGGLNG 528 (699)
T ss_dssp SSSSCCEECC-C--SSSCCEEBCCSSS
T ss_pred cCCCcEEEcc-c--CCCCeEEEEeCCC
Confidence 75 5555443 2 1224688888764
No 148
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.13 E-value=0.15 Score=48.89 Aligned_cols=118 Identities=17% Similarity=0.282 Sum_probs=64.9
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-----eeeecccccccccccccccccceeeeE
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-----RQLCELPLVENIPIAYNSVREGMRLIS 166 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-----~~lt~~p~~~~~P~~~~~~~~~~r~~~ 166 (459)
...+..++|||||++|+..+. ...+.||++..... ..+..+ ..-...+..+.
T Consensus 58 ~~~v~~v~~sp~~~~las~s~-------------D~~v~iw~~~~~~~~~~~~~~~~~~----------~~h~~~V~~v~ 114 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGSF-------------DSTVSIWAKEESADRTFEMDLLAII----------EGHENEVKGVA 114 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEET-------------TSCEEEEEC-------CCCEEEEEE----------C----CEEEEE
T ss_pred cCCEEEEEECCCCCEEEEEeC-------------CCcEEEEEcccCcCccccceeEEEE----------cCCCCcEEEEE
Confidence 445689999999999877752 36788998753211 111111 11123567899
Q ss_pred EecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceE---eccccceeccceeCCCCcEEEEEeecCCccEE
Q 012630 167 WRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEI---LHKLDLRFRGVSWCDDSLALVQETWFKTTQTR 243 (459)
Q Consensus 167 WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~---L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ 243 (459)
|+|||. .|+-. ..|+ .|.+++. .-.+...+. +..-......+.|+||+..|+.... ++..+
T Consensus 115 ~sp~g~-~las~-s~D~-----------~v~iwd~-~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~--D~~i~ 178 (330)
T 2hes_X 115 WSNDGY-YLATC-SRDK-----------SVWIWET-DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY--DDTVR 178 (330)
T ss_dssp ECTTSC-EEEEE-ETTS-----------CEEEEEC-CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET--TSCEE
T ss_pred ECCCCC-EEEEE-eCCC-----------EEEEEec-cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC--CCeEE
Confidence 999988 55532 2222 3444444 102211121 2222334667899999877776552 56677
Q ss_pred EEEEc
Q 012630 244 TWLIS 248 (459)
Q Consensus 244 ly~v~ 248 (459)
+|.+.
T Consensus 179 iW~~~ 183 (330)
T 2hes_X 179 IWKDY 183 (330)
T ss_dssp EEEEE
T ss_pred EEECC
Confidence 88654
No 149
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.05 E-value=0.058 Score=51.17 Aligned_cols=151 Identities=14% Similarity=0.093 Sum_probs=81.9
Q ss_pred hhcceEEEcCCCceeecCCC-ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 73 TTTQLVLATLDGTVKEFGPP-AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 73 ~~sqL~~v~~~G~~~~l~~~-~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
....|++++.+|+.+.+..+ .....+.++|||+.+ +... ....+++++.+|. .+.+.... ...
T Consensus 65 ~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~-v~~~------------~~~~v~~~~~~g~-~~~~~~~~--~~~ 128 (305)
T 3dr2_A 65 VGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLV-HCEH------------GRRAITRSDADGQ-AHLLVGRY--AGK 128 (305)
T ss_dssp TTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEE-EEET------------TTTEEEEECTTSC-EEEEECEE--TTE
T ss_pred CCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEE-EEEC------------CCCEEEEECCCCC-EEEEEecc--CCC
Confidence 34567777776666655543 344689999999844 3321 1256888888754 44443311 110
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccC------CccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeC
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDG------GAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWC 225 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~------g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws 225 (459)
....+..+.+.|||. |+++...-+ +...........||.++. .+++.+.+. ......+++|+
T Consensus 129 ------~~~~~~~i~~d~dG~--l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~---~~g~~~~~~-~~~~p~gl~~s 196 (305)
T 3dr2_A 129 ------RLNSPNDLIVARDGA--IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP---DGSPLQRMA-DLDHPNGLAFS 196 (305)
T ss_dssp ------ECSCCCCEEECTTSC--EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS---SSCCCEEEE-EESSEEEEEEC
T ss_pred ------ccCCCCCEEECCCCC--EEEeCcCCCccccccccccccccCCCeEEEEcC---CCCcEEEEe-cCCCCcceEEc
Confidence 112456789999987 444321000 000000011357999987 545777665 33334568999
Q ss_pred CCCcEE-EEEeecC-CccEEEEEEcCCC
Q 012630 226 DDSLAL-VQETWFK-TTQTRTWLISPGS 251 (459)
Q Consensus 226 ~D~~al-~~~~~~~-~~~~~ly~v~~~~ 251 (459)
+|+..| +.+.... ....+|+++++.+
T Consensus 197 pdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp TTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred CCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 998544 4433110 1124677777653
No 150
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.04 E-value=0.024 Score=64.70 Aligned_cols=136 Identities=7% Similarity=0.012 Sum_probs=75.7
Q ss_pred cceEEEcC-CCcee-ecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeeccccccc
Q 012630 75 TQLVLATL-DGTVK-EFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~~~~ 150 (459)
+.|.++++ +|+.. .+.. ...+..++|||||++|+..+. ...+.+||+..+ .+..+........
T Consensus 1107 ~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~-------------dg~i~vwd~~~~~~~~~~~~~~~~~~ 1173 (1249)
T 3sfz_A 1107 KTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDD-------------NGEIRIWNVSDGQLLHSCAPISVEEG 1173 (1249)
T ss_dssp SCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEET-------------TSCCCEEESSSSCCCCCCCCCC----
T ss_pred CcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeC-------------CCEEEEEECCCCceEEEecccccccc
Confidence 34556666 44332 3332 445678999999999987753 256889998743 3333322111000
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceE-eccccceeccceeCCCCc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEI-LHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~-L~~~~~~~~~~~Ws~D~~ 229 (459)
...-...+..+.|+|||+ .|+.. + +.|.+++. ..++... +.........+.|++|+.
T Consensus 1174 ----~~~~~~~v~~l~fs~dg~-~l~s~---~-----------g~v~vwd~---~~g~~~~~~~~~~~~i~~~~~s~dg~ 1231 (1249)
T 3sfz_A 1174 ----TATHGGWVTDVCFSPDSK-TLVSA---G-----------GYLKWWNV---ATGDSSQTFYTNGTNLKKIHVSPDFR 1231 (1249)
T ss_dssp -------CCSCCCEEEECTTSS-CEEEE---S-----------SSEEEBCS---SSCBCCCCCCCSSCCCCCCEECSSSC
T ss_pred ----ccccCceEEEEEECCCCC-EEEEC---C-----------CeEEEEEC---CCCceeeeeeccCCcccEEEECCCCC
Confidence 011233467899999999 56532 1 24666765 3223332 222334466789999986
Q ss_pred EEEEEeecCCccEEEEEE
Q 012630 230 ALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v 247 (459)
.|+... .++...+|.+
T Consensus 1232 ~l~~~~--~dg~v~vw~l 1247 (1249)
T 3sfz_A 1232 TYVTVD--NLGILYILQV 1247 (1249)
T ss_dssp CEEEEC--TTCCEEEECC
T ss_pred EEEEec--CCcEEEEEee
Confidence 666543 2444555543
No 151
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.03 E-value=0.22 Score=50.41 Aligned_cols=95 Identities=7% Similarity=0.005 Sum_probs=52.3
Q ss_pred hhcceEEEcC-CCcee-ecCC---C-ceeeecccCCCCCeEEEEEe-ccCccccccc------CCCCcceEEEecCCcee
Q 012630 73 TTTQLVLATL-DGTVK-EFGP---P-AIYTAVEPSPDQKYILITSI-DRPYSFTVSY------TKFPQKVQVWTADGKFV 139 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~-~l~~---~-~~~~~~~~SPDG~~l~~~~~-~~p~s~~v~~------~~~~~~~~v~d~~g~~~ 139 (459)
..+.|.++|. ++++. .+.. + ....++.||||++. ++++. ..|-.++..+ .....+|.+||++.+++
T Consensus 162 ~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~ 240 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR 240 (462)
T ss_dssp SCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE
T ss_pred CCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE
Confidence 3468999998 77755 3432 2 22247889999994 45553 1122222111 02458899999876543
Q ss_pred eeeecccccccccccccccccceeeeEE--ecCCCceEEEEE
Q 012630 140 RQLCELPLVENIPIAYNSVREGMRLISW--RADRPSTLYWVE 179 (459)
Q Consensus 140 ~~lt~~p~~~~~P~~~~~~~~~~r~~~W--spDg~~~l~~~~ 179 (459)
.+- .++.+ ...+++.+.+ +|||+ .+|.+.
T Consensus 241 ~~t--I~vg~--------~g~~P~~i~f~~~Pdg~-~aYV~~ 271 (462)
T 2ece_A 241 IHS--LTLGE--------ENRMALELRPLHDPTKL-MGFINM 271 (462)
T ss_dssp EEE--EESCT--------TEEEEEEEEECSSTTCC-EEEEEE
T ss_pred eeE--EecCC--------CCCccceeEeeECCCCC-EEEEEE
Confidence 322 22210 0124556555 99988 555443
No 152
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.03 E-value=0.024 Score=54.07 Aligned_cols=84 Identities=10% Similarity=0.098 Sum_probs=51.6
Q ss_pred hcceEEEcC-CCceeecC-CCceeeecccCC---CCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeecccc
Q 012630 74 TTQLVLATL-DGTVKEFG-PPAIYTAVEPSP---DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCELPL 147 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~-~~~~~~~~~~SP---DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~p~ 147 (459)
.+.|.++++ +++..... ....+..+.||| ||++|+..+. ...+.+||+..+.. ..+....
T Consensus 189 d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~~~~~~~~~- 254 (357)
T 3i2n_A 189 NGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSL-------------EGKFHVFDMRTQHPTKGFASVS- 254 (357)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEES-------------TTEEEEEEEEEEETTTEEEEEE-
T ss_pred CCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECC-------------CCeEEEEeCcCCCcccceeeec-
Confidence 367888888 66554333 355678999999 9999988753 36788998764321 1111000
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEE
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVE 179 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~ 179 (459)
...-...+..+.|+||++ .++.+.
T Consensus 255 -------~~~~~~~v~~~~~~~~~~-~~l~~~ 278 (357)
T 3i2n_A 255 -------EKAHKSTVWQVRHLPQNR-ELFLTA 278 (357)
T ss_dssp -------EECCSSCEEEEEEETTEE-EEEEEE
T ss_pred -------cCCCcCCEEEEEECCCCC-cEEEEE
Confidence 001234567899999987 344343
No 153
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.02 E-value=0.085 Score=52.66 Aligned_cols=136 Identities=15% Similarity=0.296 Sum_probs=77.0
Q ss_pred hhcceEEEcC-CCc----eeec-CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-c-eeeeeec
Q 012630 73 TTTQLVLATL-DGT----VKEF-GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-K-FVRQLCE 144 (459)
Q Consensus 73 ~~sqL~~v~~-~G~----~~~l-~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~-~~~~lt~ 144 (459)
..+.|.++++ ++. ...+ .....+..++|||+|++++++.. ....+.+||+.. + .+..+..
T Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~------------~dg~v~vwd~~~~~~~~~~~~~ 319 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGS------------ADKTVALWDLRNLKLKLHSFES 319 (430)
T ss_dssp TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEE------------TTSEEEEEETTCTTSCSEEEEC
T ss_pred CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEe------------CCCeEEEEeCCCCCCCeEEeec
Confidence 3567888888 441 2233 23455689999999998766642 236789999763 2 2222221
Q ss_pred ccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCC----------CceEecc
Q 012630 145 LPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE----------EPEILHK 214 (459)
Q Consensus 145 ~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~----------~~~~L~~ 214 (459)
-...+..+.|+|+++ .++.+...|+. =.||-+.. .+. .+..+..
T Consensus 320 -------------h~~~v~~i~~sp~~~-~~l~s~~~d~~---------i~iwd~~~---~~~~~~~~~~~~~~~~~~~~ 373 (430)
T 2xyi_A 320 -------------HKDEIFQVQWSPHNE-TILASSGTDRR---------LHVWDLSK---IGEEQSTEDAEDGPPELLFI 373 (430)
T ss_dssp -------------CSSCEEEEEECSSCT-TEEEEEETTSC---------CEEEEGGG---TTCCCCHHHHHHCCTTEEEE
T ss_pred -------------CCCCEEEEEECCCCC-CEEEEEeCCCc---------EEEEeCCC---CccccCccccccCCcceEEE
Confidence 133567899999998 44434332221 12333322 110 1222221
Q ss_pred ---ccceeccceeCCCCc-EEEEEeecCCccEEEEEEc
Q 012630 215 ---LDLRFRGVSWCDDSL-ALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 215 ---~~~~~~~~~Ws~D~~-al~~~~~~~~~~~~ly~v~ 248 (459)
.......+.|++++. .|+... .++..++|.++
T Consensus 374 ~~~h~~~v~~~~~~p~~~~~l~s~s--~dg~i~iw~~~ 409 (430)
T 2xyi_A 374 HGGHTAKISDFSWNPNEPWIICSVS--EDNIMQVWQMA 409 (430)
T ss_dssp CCCCSSCEEEEEECSSSTTEEEEEE--TTSEEEEEEEC
T ss_pred cCCCCCCceEEEECCCCCCEEEEEE--CCCCEEEeEcc
Confidence 123366789999875 565544 35667888875
No 154
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.01 E-value=0.47 Score=45.02 Aligned_cols=128 Identities=11% Similarity=0.154 Sum_probs=70.1
Q ss_pred ceEEEcCCC-ceeec-CCCceeeecccCCCCC------eEEEEEeccCcccccccCCCCcceEEEecCCceee-eeeccc
Q 012630 76 QLVLATLDG-TVKEF-GPPAIYTAVEPSPDQK------YILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVR-QLCELP 146 (459)
Q Consensus 76 qL~~v~~~G-~~~~l-~~~~~~~~~~~SPDG~------~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~-~lt~~p 146 (459)
.+.+.++.+ ....+ +....+..+.++|+++ .|+..+ ....+.+||+...... .+..
T Consensus 130 ~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-------------~d~~i~~wd~~~~~~~~~~~~-- 194 (319)
T 3frx_A 130 TIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG-------------NDKMVKAWNLNQFQIEADFIG-- 194 (319)
T ss_dssp CEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEE-------------TTSCEEEEETTTTEEEEEECC--
T ss_pred eEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe-------------CCCEEEEEECCcchhheeecC--
Confidence 444555532 22223 2344567888888543 554443 2367899998754332 2211
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCC
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCD 226 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~ 226 (459)
-...+..+.|+|||. .|+-. .. -..|.+++. ..++.............+.|+|
T Consensus 195 -----------h~~~v~~~~~sp~g~-~l~s~-~~-----------dg~i~iwd~---~~~~~~~~~~~~~~v~~~~~sp 247 (319)
T 3frx_A 195 -----------HNSNINTLTASPDGT-LIASA-GK-----------DGEIMLWNL---AAKKAMYTLSAQDEVFSLAFSP 247 (319)
T ss_dssp -----------CCSCEEEEEECTTSS-EEEEE-ET-----------TCEEEEEET---TTTEEEEEEECCSCEEEEEECS
T ss_pred -----------CCCcEEEEEEcCCCC-EEEEE-eC-----------CCeEEEEEC---CCCcEEEEecCCCcEEEEEEcC
Confidence 123566889999998 55532 11 125666766 3323322222334466789999
Q ss_pred CCcEEEEEeecCCccEEEEEEc
Q 012630 227 DSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 227 D~~al~~~~~~~~~~~~ly~v~ 248 (459)
|+..|+... ....++|.++
T Consensus 248 ~~~~la~~~---~~~i~v~~~~ 266 (319)
T 3frx_A 248 NRYWLAAAT---ATGIKVFSLD 266 (319)
T ss_dssp SSSEEEEEE---TTEEEEEEET
T ss_pred CCCEEEEEc---CCCcEEEEeC
Confidence 987766544 2335666664
No 155
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=96.00 E-value=0.00039 Score=67.40 Aligned_cols=81 Identities=10% Similarity=0.103 Sum_probs=55.4
Q ss_pred CEEEEEeecCCCCcceE---EEECCCcceeecccccCCC-CCCcCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCce
Q 012630 357 LKILTSKESKTEITQYW---IQSWPHKKCRQITDFPHPY-PLLSTLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLL 432 (459)
Q Consensus 357 ~~i~~~~~s~~~P~ely---~~~~~~g~~~~LT~~~~~~-~~~~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP 432 (459)
..+...+.+...|++++ ...+.......++..+.+. ........|.++|++.||.+|.++|++|++.. + ++|
T Consensus 21 ~~l~~~~~~~~~p~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~P~~~~--~--~~p 96 (337)
T 1vlq_A 21 EELKKYRPERYEEKDFDEFWEETLAESEKFPLDPVFERMESHLKTVEAYDVTFSGYRGQRIKGWLLVPKLEE--E--KLP 96 (337)
T ss_dssp HHHTTCCCCCCCCTTHHHHHHHHHHHHHTSCCCCEEEECCCSCSSEEEEEEEEECGGGCEEEEEEEEECCSC--S--SEE
T ss_pred HHHHhcCCCCCCCccHHHHHHHHHHHHhcCCCCceEeecCcCCCCeEEEEEEEEcCCCCEEEEEEEecCCCC--C--Ccc
Confidence 45666778888999876 3222112222344333332 23456789999999999999999999998752 3 799
Q ss_pred EEEEEcCCc
Q 012630 433 CLFWAYPGE 441 (459)
Q Consensus 433 ~Il~~Yp~e 441 (459)
+||+++.--
T Consensus 97 ~vv~~HG~g 105 (337)
T 1vlq_A 97 CVVQYIGYN 105 (337)
T ss_dssp EEEECCCTT
T ss_pred EEEEEcCCC
Confidence 999998743
No 156
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.00 E-value=0.039 Score=52.96 Aligned_cols=116 Identities=9% Similarity=0.092 Sum_probs=67.1
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC-
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD- 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD- 170 (459)
...+..++|||||++|+..+. ...+.||++.+...+.+..... -...+..+.|+++
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~-------------dg~i~iw~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~ 67 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSS-------------DKTIKIFEVEGETHKLIDTLTG----------HEGPVWRVDWAHPK 67 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEET-------------TSCEEEEEEETTEEEEEEEECC----------CSSCEEEEEECCGG
T ss_pred cccEEEEEEcCCCCEEEEEEC-------------CCcEEEEecCCCcceeeeEecC----------CCCcEEEEEeCCCC
Confidence 445689999999999987753 3678999986544433332211 1235678999987
Q ss_pred -CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEe---ccccceeccceeCCC--CcEEEEEeecCCccEEE
Q 012630 171 -RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEIL---HKLDLRFRGVSWCDD--SLALVQETWFKTTQTRT 244 (459)
Q Consensus 171 -g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L---~~~~~~~~~~~Ws~D--~~al~~~~~~~~~~~~l 244 (459)
+. .|+.. ..| ..|.+++. ..++...+ .........+.|+++ +..|+... .++..++
T Consensus 68 ~~~-~l~s~-~~d-----------g~v~iwd~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~--~d~~i~v 129 (379)
T 3jrp_A 68 FGT-ILASC-SYD-----------GKVLIWKE---ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSV 129 (379)
T ss_dssp GCS-EEEEE-ETT-----------SCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEE
T ss_pred CCC-EEEEe-ccC-----------CEEEEEEc---CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec--CCCcEEE
Confidence 55 44432 222 23555555 33232222 223345677899998 76666544 2444555
Q ss_pred EEEc
Q 012630 245 WLIS 248 (459)
Q Consensus 245 y~v~ 248 (459)
|.+.
T Consensus 130 ~d~~ 133 (379)
T 3jrp_A 130 VEFK 133 (379)
T ss_dssp EECC
T ss_pred EecC
Confidence 5554
No 157
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.95 E-value=0.12 Score=52.17 Aligned_cols=135 Identities=10% Similarity=0.007 Sum_probs=72.3
Q ss_pred ecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceEE
Q 012630 97 AVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLY 176 (459)
Q Consensus 97 ~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~ 176 (459)
.+.++|||+.++|++. ...++++|..++.+..+...++.....+.......+...+.++||++ +||
T Consensus 269 ~~~~~~dg~~~~~~s~-------------~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~-rly 334 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTY-------------TGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSD-RIY 334 (426)
T ss_dssp CCEECTTTCEEEEEBT-------------TSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGT-EEE
T ss_pred EeeecCCCCEEEEEeC-------------CCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCC-EEE
Confidence 3455777777777641 24688888877665544332221111111111223334578899988 666
Q ss_pred EEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCc-EEEEEeecCCccEEEEEEcCCCCC
Q 012630 177 WVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSL-ALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 177 ~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~-al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
..... ++....+ ..-+.|.++|+ ...+...-......-.++.+++||. .++...+.+ ..|.+||+.+.+
T Consensus 335 Va~~~-~~~gthk-~~s~~VsVID~---~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s---~~VsVID~~t~k 404 (426)
T 3c75_H 335 LLVDQ-RDEWKHK-AASRFVVVLNA---ETGERINKIELGHEIDSINVSQDAEPLLYALSAGT---QTLHIYDAATGE 404 (426)
T ss_dssp EEEEE-CCTTCTT-SCEEEEEEEET---TTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTT---TEEEEEETTTCC
T ss_pred EEecc-ccccccc-CCCCEEEEEEC---CCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCC---CeEEEEECCCCC
Confidence 54321 1110000 01247999988 4324333333444567789999986 554444322 359999988754
No 158
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.94 E-value=0.088 Score=50.10 Aligned_cols=115 Identities=10% Similarity=0.219 Sum_probs=70.4
Q ss_pred CceeeecccCCC---CCeEEEEEeccCcccccccCCCCcceEEEecCC--cee-eeeecccccccccccccccccceeee
Q 012630 92 PAIYTAVEPSPD---QKYILITSIDRPYSFTVSYTKFPQKVQVWTADG--KFV-RQLCELPLVENIPIAYNSVREGMRLI 165 (459)
Q Consensus 92 ~~~~~~~~~SPD---G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g--~~~-~~lt~~p~~~~~P~~~~~~~~~~r~~ 165 (459)
.+.+..++|||| |++|+..+. ...+.|||+.. ... ..+.. -...+..+
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~-------------dg~i~iw~~~~~~~~~~~~~~~-------------h~~~v~~~ 92 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSW-------------ANDVRCWEVQDSGQTIPKAQQM-------------HTGPVLDV 92 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEET-------------TSEEEEEEECTTSCEEEEEEEE-------------CSSCEEEE
T ss_pred CCceEEEEEcCCCCCceEEEEECC-------------CCcEEEEEcCCCCceeEEEecc-------------ccCCEEEE
Confidence 455789999999 688877652 36789999763 333 22221 12356789
Q ss_pred EEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceecccee--CCCCcEEEEEeecCCccEE
Q 012630 166 SWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSW--CDDSLALVQETWFKTTQTR 243 (459)
Q Consensus 166 ~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~W--s~D~~al~~~~~~~~~~~~ 243 (459)
.|+||+. .|+.. .. ...|.+++. ..++...+.........+.| ++++..|+.... ++.
T Consensus 93 ~~~~~~~-~l~s~-~~-----------dg~v~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--dg~-- 152 (368)
T 3mmy_A 93 CWSDDGS-KVFTA-SC-----------DKTAKMWDL---SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW--DKT-- 152 (368)
T ss_dssp EECTTSS-EEEEE-ET-----------TSEEEEEET---TTTEEEEEEECSSCEEEEEEEECSSCEEEEEEET--TSE--
T ss_pred EECcCCC-EEEEE-cC-----------CCcEEEEEc---CCCCceeeccccCceEEEEEEeCCCCCEEEEccC--CCc--
Confidence 9999998 55532 21 125666666 44455555545556777899 788766665442 333
Q ss_pred EEEEcCCCC
Q 012630 244 TWLISPGSK 252 (459)
Q Consensus 244 ly~v~~~~~ 252 (459)
+.+.++.++
T Consensus 153 i~vwd~~~~ 161 (368)
T 3mmy_A 153 LKFWDTRSS 161 (368)
T ss_dssp EEEECSSCS
T ss_pred EEEEECCCC
Confidence 444555443
No 159
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.93 E-value=0.21 Score=53.72 Aligned_cols=114 Identities=14% Similarity=0.051 Sum_probs=70.0
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceE
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTL 175 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l 175 (459)
.++++.+.++.|+++- .....|++++++|...+.+.... ...++.+.+.|++. .|
T Consensus 456 ~glavD~~~g~LY~tD------------~~~~~I~v~d~dg~~~~~l~~~~------------~~~P~giavDp~~g-~l 510 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTD------------SVLGTVSVADTKGVKRKTLFREQ------------GSKPRAIVVDPVHG-FM 510 (699)
T ss_dssp CCEECCCSSSBCEECC------------TTTSCEEEEBSSSCCEEEECCCS------------SCCCCCEECCSSSS-CC
T ss_pred ceEEEEeeCCcEEEEe------------ccCCeEEEEecCCCceEEEEeCC------------CCCcceEEEccCCC-cE
Confidence 3566666666665542 12467899999887766554321 12456788888877 78
Q ss_pred EEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccce-eccceeCCC-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 176 YWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLR-FRGVSWCDD-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 176 ~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~-~~~~~Ws~D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
||+.. +. ...|++++. +|...+.|...... -.+++|+++ +.+++.+. ...+|+++++++
T Consensus 511 y~td~---~~-------~~~I~~~~~---dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~----~~~~I~~~d~dG 571 (699)
T 1n7d_A 511 YWTDW---GT-------PAKIKKGGL---NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS----KLHSISSIDVNG 571 (699)
T ss_dssp EECCC---SS-------SCCEEBCCS---SSCCCCEESCSSCSSCCCEEECTTTCCEEEEET----TTTEEEEECSSS
T ss_pred EEccc---CC-------CCeEEEEeC---CCCCeeEEEeCCCCCccEEEEeccCCEEEEEec----CCCeEEEEccCC
Confidence 88642 11 246888877 76444455433222 456899987 45555543 334689999864
No 160
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.85 E-value=0.16 Score=47.58 Aligned_cols=128 Identities=9% Similarity=0.049 Sum_probs=75.3
Q ss_pred cceEEEcCCCceeecCCC-ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Ccee---eeeecccccc
Q 012630 75 TQLVLATLDGTVKEFGPP-AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFV---RQLCELPLVE 149 (459)
Q Consensus 75 sqL~~v~~~G~~~~l~~~-~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~---~~lt~~p~~~ 149 (459)
+.||.++..|+.+.+... ....++.|||||+.| +... ....+++|+++ .+.. ..+...
T Consensus 153 ~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~------------~~~~i~~~~~~~~g~~~~~~~~~~~---- 215 (296)
T 3e5z_A 153 RWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLL-VSDT------------GDNATHRYCLNARGETEYQGVHFTV---- 215 (296)
T ss_dssp CEEEEECTTSCEEEEECCCSSEEEEEECTTSCEE-EEET------------TTTEEEEEEECSSSCEEEEEEEECC----
T ss_pred cEEEEECCCCCEEEeecCCCCCccEEECCCCCEE-EEeC------------CCCeEEEEEECCCCcCcCCCeEeeC----
Confidence 478888877776665443 334689999999998 6532 23578888875 2222 111111
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceecccee-CCCC
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSW-CDDS 228 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~W-s~D~ 228 (459)
....+..+.+.+||. +|+.. . ..|++++. +| +.............+.+ ++|+
T Consensus 216 --------~~~~p~~i~~d~~G~---l~v~~--~----------~~v~~~~~---~g-~~~~~~~~~~~~~~~~f~~~d~ 268 (296)
T 3e5z_A 216 --------EPGKTDGLRVDAGGL---IWASA--G----------DGVHVLTP---DG-DELGRVLTPQTTSNLCFGGPEG 268 (296)
T ss_dssp --------SSSCCCSEEEBTTSC---EEEEE--T----------TEEEEECT---TS-CEEEEEECSSCCCEEEEESTTS
T ss_pred --------CCCCCCeEEECCCCC---EEEEc--C----------CeEEEECC---CC-CEEEEEECCCCceeEEEECCCC
Confidence 122456789999987 34433 1 24777777 55 43332222222556778 5776
Q ss_pred c-EEEEEeecCCccEEEEEEcCCCC
Q 012630 229 L-ALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 229 ~-al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
. .++... + .+|++++.+.
T Consensus 269 ~~L~v~t~--~----~l~~~~~~~~ 287 (296)
T 3e5z_A 269 RTLYMTVS--T----EFWSIETNVR 287 (296)
T ss_dssp CEEEEEET--T----EEEEEECSCC
T ss_pred CEEEEEcC--C----eEEEEEcccc
Confidence 4 444432 1 5999988754
No 161
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.85 E-value=0.13 Score=54.83 Aligned_cols=136 Identities=15% Similarity=0.114 Sum_probs=81.7
Q ss_pred hcceEEEcC-CCce-eec-CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 74 TTQLVLATL-DGTV-KEF-GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~-~G~~-~~l-~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
.+.|.+.|+ +|.. +.+ +....+..++|||||++|+..+. ...+.|||..+.....+.....
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-------------D~~i~iwd~~~~~~~~~~~~~~--- 514 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR-------------DRTIKLWNTLGECKYTISEGGE--- 514 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET-------------TSCEEEECTTSCEEEEECSSTT---
T ss_pred CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC-------------CCEEEEEECCCCcceeeccCCC---
Confidence 356777787 6643 334 34556789999999999977653 3678999987765544433110
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-EeccccceeccceeCCCCc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~~~~~~~~~~Ws~D~~ 229 (459)
.-...+..+.|+|++...++.+...|+ .|.+++. ..++.. .+.........+.|++|+.
T Consensus 515 ------~h~~~v~~~~~~~~~~~~~l~s~s~d~-----------~v~vwd~---~~~~~~~~~~~h~~~v~~v~~spdg~ 574 (694)
T 3dm0_A 515 ------GHRDWVSCVRFSPNTLQPTIVSASWDK-----------TVKVWNL---SNCKLRSTLAGHTGYVSTVAVSPDGS 574 (694)
T ss_dssp ------SCSSCEEEEEECSCSSSCEEEEEETTS-----------CEEEEET---TTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred ------CCCCcEEEEEEeCCCCcceEEEEeCCC-----------eEEEEEC---CCCcEEEEEcCCCCCEEEEEEeCCCC
Confidence 112346688999998533343333222 4556665 332333 2322334466789999987
Q ss_pred EEEEEeecCCccEEEEEE
Q 012630 230 ALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v 247 (459)
.|++... ++..++|-+
T Consensus 575 ~l~sg~~--Dg~i~iwd~ 590 (694)
T 3dm0_A 575 LCASGGK--DGVVLLWDL 590 (694)
T ss_dssp EEEEEET--TSBCEEEET
T ss_pred EEEEEeC--CCeEEEEEC
Confidence 7776542 455566654
No 162
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.84 E-value=0.11 Score=59.09 Aligned_cols=131 Identities=17% Similarity=0.185 Sum_probs=79.6
Q ss_pred cceEEEcC-CCce-eecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeeccccccc
Q 012630 75 TQLVLATL-DGTV-KEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~-~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~ 150 (459)
+.|.++++ +|+. ..+.. ...+..++|||||++|+..+. ...+.|||+. |..+..+...
T Consensus 637 ~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-------------d~~v~vwd~~~~~~~~~~~~~----- 698 (1249)
T 3sfz_A 637 KTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA-------------DKKVKIWDSATGKLVHTYDEH----- 698 (1249)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTCCEEEEEECC-----
T ss_pred CeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC-------------CCeEEEEECCCCceEEEEcCC-----
Confidence 46777777 6643 34443 456689999999999987753 3678999986 4444444321
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-EeccccceeccceeCCCCc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~~~~~~~~~~Ws~D~~ 229 (459)
...+..+.|+|++...++.+...|+ .|.+++. ..++.. .+.........+.|++|+.
T Consensus 699 --------~~~v~~~~~~~~~~~~~l~sg~~d~-----------~v~vwd~---~~~~~~~~~~~h~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 699 --------SEQVNCCHFTNKSNHLLLATGSNDF-----------FLKLWDL---NQKECRNTMFGHTNSVNHCRFSPDDE 756 (1249)
T ss_dssp --------SSCEEEEEECSSSSCCEEEEEETTS-----------CEEEEET---TSSSEEEEECCCSSCEEEEEECSSTT
T ss_pred --------CCcEEEEEEecCCCceEEEEEeCCC-----------eEEEEEC---CCcchhheecCCCCCEEEEEEecCCC
Confidence 2356688999987755554433222 4556665 322333 3333344566789999986
Q ss_pred EEEEEeecCCccEEEEEE
Q 012630 230 ALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v 247 (459)
.|+.... ++..++|-+
T Consensus 757 ~l~s~s~--dg~v~vwd~ 772 (1249)
T 3sfz_A 757 LLASCSA--DGTLRLWDV 772 (1249)
T ss_dssp EEEEEES--SSEEEEEEG
T ss_pred EEEEEEC--CCeEEEEeC
Confidence 6665442 444555554
No 163
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.81 E-value=1.1 Score=41.05 Aligned_cols=137 Identities=14% Similarity=0.098 Sum_probs=84.5
Q ss_pred hcceEEEcCCC-ceee------cCCC-ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecc
Q 012630 74 TTQLVLATLDG-TVKE------FGPP-AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCEL 145 (459)
Q Consensus 74 ~sqL~~v~~~G-~~~~------l~~~-~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~ 145 (459)
+..|++++++| ..+. +..+ .....+.|+|++++|.++.. ....|++++.+|+....+...
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~------------~~~~I~~~~~~g~~~~~~~~~ 76 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI------------SEPSIGRASLHGGEPTTIIRQ 76 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET------------TTTEEEEEESSSCCCEEEECT
T ss_pred CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC------------CCCEEEEEecCCCCcEEEEEC
Confidence 35788888844 3322 1122 23368999999999977742 236789999888765444321
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceecccee
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSW 224 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~W 224 (459)
. ...++.+.+.|++. .|||+... .+.|++++. +|...+.+.... ..-.+++.
T Consensus 77 ~------------~~~p~~ia~d~~~~-~lyv~d~~-----------~~~I~~~~~---~g~~~~~~~~~~~~~P~~i~v 129 (267)
T 1npe_A 77 D------------LGSPEGIALDHLGR-TIFWTDSQ-----------LDRIEVAKM---DGTQRRVLFDTGLVNPRGIVT 129 (267)
T ss_dssp T------------CCCEEEEEEETTTT-EEEEEETT-----------TTEEEEEET---TSCSCEEEECSSCSSEEEEEE
T ss_pred C------------CCCccEEEEEecCC-eEEEEECC-----------CCEEEEEEc---CCCCEEEEEECCCCCccEEEE
Confidence 0 13667889999887 78877521 346788777 664444444322 23456788
Q ss_pred CCC-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 225 CDD-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 225 s~D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
+++ +.+++.+.. .....|+++++++
T Consensus 130 d~~~g~lyv~~~~--~~~~~I~~~~~dg 155 (267)
T 1npe_A 130 DPVRGNLYWTDWN--RDNPKIETSHMDG 155 (267)
T ss_dssp ETTTTEEEEEECC--SSSCEEEEEETTS
T ss_pred eeCCCEEEEEECC--CCCcEEEEEecCC
Confidence 885 566665431 1235688888764
No 164
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.79 E-value=0.09 Score=49.49 Aligned_cols=116 Identities=10% Similarity=0.098 Sum_probs=65.2
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC-
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD- 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD- 170 (459)
.+.+..++|||||++|+..+. ...+.|||++++..+.+..+. +-...+..+.|+++
T Consensus 9 ~~~V~~~~~s~~g~~las~s~-------------D~~v~iw~~~~~~~~~~~~l~----------gH~~~V~~v~~s~~~ 65 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCSS-------------DKTIKIFEVEGETHKLIDTLT----------GHEGPVWRVDWAHPK 65 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEET-------------TSCEEEEEBCSSCBCCCEEEC----------CCSSCEEEEEECCGG
T ss_pred cCceEEEEECCCCCEEEEEeC-------------CCEEEEEecCCCCcEEEEEEc----------cccCCeEEEEecCCC
Confidence 445678999999999887753 367899998753222222211 11235678899875
Q ss_pred -CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceE---eccccceeccceeCCC--CcEEEEEeecCCccEEE
Q 012630 171 -RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEI---LHKLDLRFRGVSWCDD--SLALVQETWFKTTQTRT 244 (459)
Q Consensus 171 -g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~---L~~~~~~~~~~~Ws~D--~~al~~~~~~~~~~~~l 244 (459)
|. .|+ +...|+ .|.+++. ..++... +.........+.|+|+ +..|+.... ++..++
T Consensus 66 ~g~-~l~-s~s~D~-----------~v~iWd~---~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~--d~~v~~ 127 (297)
T 2pm7_B 66 FGT-ILA-SCSYDG-----------KVMIWKE---ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS--DGKVSV 127 (297)
T ss_dssp GCS-EEE-EEETTT-----------EEEEEEB---SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET--TSEEEE
T ss_pred cCC-EEE-EEcCCC-----------EEEEEEc---CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC--CCcEEE
Confidence 54 444 222222 3555555 3222222 2222334667899987 666665442 455666
Q ss_pred EEEc
Q 012630 245 WLIS 248 (459)
Q Consensus 245 y~v~ 248 (459)
|-+.
T Consensus 128 wd~~ 131 (297)
T 2pm7_B 128 VEFK 131 (297)
T ss_dssp EEBC
T ss_pred EEec
Confidence 6654
No 165
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.75 E-value=0.074 Score=52.63 Aligned_cols=88 Identities=9% Similarity=0.101 Sum_probs=48.4
Q ss_pred hcceEEEcCC--Cceee--------c-CCCceeeecccCCCC-CeEEEEEeccCcccccccCCCCcceEEEecCCcee--
Q 012630 74 TTQLVLATLD--GTVKE--------F-GPPAIYTAVEPSPDQ-KYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-- 139 (459)
Q Consensus 74 ~sqL~~v~~~--G~~~~--------l-~~~~~~~~~~~SPDG-~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-- 139 (459)
.+.|.++++. +.... + +....+..+.||||| ++|+..+. ...+.+||+..+..
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-------------dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS-------------KGTIRLCDMRASALCD 263 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET-------------TSCEEEEETTTCSSSC
T ss_pred CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC-------------CCeEEEEECcCCcccc
Confidence 4567777772 32222 2 234556899999999 77766652 36789999765442
Q ss_pred ---eeeecccccccccccccccccceeeeEEecCCCceEE
Q 012630 140 ---RQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLY 176 (459)
Q Consensus 140 ---~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~ 176 (459)
+.+..... ......+......+..+.|+|||+ .|+
T Consensus 264 ~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~-~l~ 301 (447)
T 3dw8_B 264 RHSKLFEEPED-PSNRSFFSEIISSISDVKFSHSGR-YMM 301 (447)
T ss_dssp TTCEEECCC------CCHHHHHTTCEEEEEECTTSS-EEE
T ss_pred ceeeEeccCCC-ccccccccccCceEEEEEECCCCC-EEE
Confidence 32222100 000000011112677899999998 555
No 166
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=95.72 E-value=0.017 Score=54.44 Aligned_cols=44 Identities=16% Similarity=0.172 Sum_probs=38.6
Q ss_pred CcCCceEEEEEECC-CCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 395 LSTLQKELIKYQRK-DGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 395 ~~~~~~E~i~yks~-DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
..+...|.+++++. +|.++..++|+|++|++++ +||+|++++..
T Consensus 13 ~~~~~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~Pvl~~lhG~ 57 (275)
T 2qm0_A 13 IITSNTEQWKMYSKLEGKEYQIHISKPKQPAPDS--GYPVIYVLDGN 57 (275)
T ss_dssp CCCTTEEEEEEECTTTCCEEEEEEECCSSCCCTT--CEEEEEEESHH
T ss_pred eecCCceEEEEEecCCCCEEEEEEECCCCCCCCC--CccEEEEecCh
Confidence 45678999999998 8999999999999998765 89999998875
No 167
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.71 E-value=1.5 Score=41.77 Aligned_cols=137 Identities=8% Similarity=0.015 Sum_probs=80.2
Q ss_pred hhcceEEEcC-CCceeecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC----ceeeeeeccc
Q 012630 73 TTTQLVLATL-DGTVKEFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG----KFVRQLCELP 146 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g----~~~~~lt~~p 146 (459)
...+|.++++ +++...+- ......++.|+|++++|.++-. ....|+.++++| .....+....
T Consensus 8 ~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~------------~~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------------SQRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp CBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEET------------TTTEEEEEEC--------CEEEECSS
T ss_pred CCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEEC------------CCCcEEEEECCCCCCCcccEEEEeCC
Confidence 3467889999 55555443 3334468999999999877742 246788888876 2323222110
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc-cceeccceeC
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL-DLRFRGVSWC 225 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~-~~~~~~~~Ws 225 (459)
...+..+...+.+. .|||+... ...|.+++. +|...+.+... ...-.+++..
T Consensus 76 ------------~~~p~glavd~~~~-~ly~~d~~-----------~~~I~~~~~---~g~~~~~~~~~~~~~P~~iavd 128 (316)
T 1ijq_A 76 ------------IQAPDGLAVDWIHS-NIYWTDSV-----------LGTVSVADT---KGVKRKTLFRENGSKPRAIVVD 128 (316)
T ss_dssp ------------CSCCCEEEEETTTT-EEEEEETT-----------TTEEEEEET---TSSSEEEEEECTTCCEEEEEEE
T ss_pred ------------CCCcCEEEEeecCC-eEEEEECC-----------CCEEEEEeC---CCCceEEEEECCCCCcceEEeC
Confidence 12345677776666 78887531 346778877 66445555432 2234556777
Q ss_pred CC-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 226 DD-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 226 ~D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
++ +.+++.+. ....+|+++++++
T Consensus 129 p~~g~ly~~d~---~~~~~I~~~~~dG 152 (316)
T 1ijq_A 129 PVHGFMYWTDW---GTPAKIKKGGLNG 152 (316)
T ss_dssp TTTTEEEEEEC---SSSCEEEEEETTS
T ss_pred CCCCEEEEEcc---CCCCeEEEEcCCC
Confidence 64 55555442 1235799998864
No 168
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.70 E-value=0.14 Score=50.78 Aligned_cols=129 Identities=10% Similarity=0.107 Sum_probs=76.3
Q ss_pred cceEEEcC-CCcee-ecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeeccccccc
Q 012630 75 TQLVLATL-DGTVK-EFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~p~~~~ 150 (459)
+.|.++|+ +|+.. .+.. ...+..+.|||||++|+..+. ...+.|||+.+... +.+..
T Consensus 130 g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~-------------D~~i~iwd~~~~~~~~~~~~------ 190 (410)
T 1vyh_C 130 ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA-------------DMTIKLWDFQGFECIRTMHG------ 190 (410)
T ss_dssp SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET-------------TSCCCEEETTSSCEEECCCC------
T ss_pred CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCCceeEEEcC------
Confidence 45667777 56433 3332 455689999999998877653 36678999875432 22211
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-EeccccceeccceeCCCCc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~~~~~~~~~~Ws~D~~ 229 (459)
-...+..+.|+||+. .|+-. .. -..|.+++. ..+... .+.........+.|++|+.
T Consensus 191 -------h~~~V~~v~~~p~~~-~l~s~-s~-----------D~~i~~wd~---~~~~~~~~~~~h~~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 191 -------HDHNVSSVSIMPNGD-HIVSA-SR-----------DKTIKMWEV---QTGYCVKTFTGHREWVRMVRPNQDGT 247 (410)
T ss_dssp -------CSSCEEEEEECSSSS-EEEEE-ET-----------TSEEEEEET---TTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred -------CCCCEEEEEEeCCCC-EEEEE-eC-----------CCeEEEEEC---CCCcEEEEEeCCCccEEEEEECCCCC
Confidence 123567899999988 55422 21 124666665 322332 2322233355578899987
Q ss_pred EEEEEeecCCccEEEEEE
Q 012630 230 ALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v 247 (459)
.|+... .++..++|-+
T Consensus 248 ~l~s~s--~D~~v~vwd~ 263 (410)
T 1vyh_C 248 LIASCS--NDQTVRVWVV 263 (410)
T ss_dssp EEEEEE--TTSCEEEEET
T ss_pred EEEEEc--CCCeEEEEEC
Confidence 777654 2455666654
No 169
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.68 E-value=0.13 Score=48.88 Aligned_cols=111 Identities=6% Similarity=0.058 Sum_probs=65.9
Q ss_pred ceeeecccCCC----CCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEE
Q 012630 93 AIYTAVEPSPD----QKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISW 167 (459)
Q Consensus 93 ~~~~~~~~SPD----G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~W 167 (459)
..+..+.|||| |++|+.... ...+.+||+. +..+..+.. -...+..+.|
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~~~~~~~~~~-------------~~~~i~~~~~ 123 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGS-------------RGIIRIINPITMQCIKHYVG-------------HGNAINELKF 123 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEET-------------TCEEEEECTTTCCEEEEEES-------------CCSCEEEEEE
T ss_pred CcEEEEEeccCCCCCCCEEEEecC-------------CCEEEEEEchhceEeeeecC-------------CCCcEEEEEE
Confidence 45678999999 567766642 3678999976 444444432 1235678999
Q ss_pred ec-CCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEec----cccceeccceeCCCCcEEEEEeecCCccE
Q 012630 168 RA-DRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILH----KLDLRFRGVSWCDDSLALVQETWFKTTQT 242 (459)
Q Consensus 168 sp-Dg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~----~~~~~~~~~~Ws~D~~al~~~~~~~~~~~ 242 (459)
+| ++. .|+.. ..| ..|++++. ..++..... ........+.|++++..|+.... ++..
T Consensus 124 ~~~~~~-~l~s~-~~d-----------g~i~iwd~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i 185 (366)
T 3k26_A 124 HPRDPN-LLLSV-SKD-----------HALRLWNI---QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM--DHSL 185 (366)
T ss_dssp CSSCTT-EEEEE-ETT-----------SCEEEEET---TTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEET--TSCE
T ss_pred CCCCCC-EEEEE-eCC-----------CeEEEEEe---ecCeEEEEecccccccCceeEEEECCCCCEEEEecC--CCCE
Confidence 99 666 55532 221 24666666 322433332 23444677899999866665442 3445
Q ss_pred EEEEE
Q 012630 243 RTWLI 247 (459)
Q Consensus 243 ~ly~v 247 (459)
++|-+
T Consensus 186 ~i~d~ 190 (366)
T 3k26_A 186 KLWRI 190 (366)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 55544
No 170
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.63 E-value=0.14 Score=56.80 Aligned_cols=139 Identities=13% Similarity=0.136 Sum_probs=76.6
Q ss_pred cceEEEcC-CCce-eecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccc--c
Q 012630 75 TQLVLATL-DGTV-KEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVE--N 150 (459)
Q Consensus 75 sqL~~v~~-~G~~-~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~--~ 150 (459)
+.|.++|+ +|+. ..+...+.+..+.|||||++|+..+. ...+.+||+.++......-..+.. .
T Consensus 79 ~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~-------------dg~V~lwd~~~~~~~~~~i~~~~~~~~ 145 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQ-------------NGSMIVYDIDRDQLSSFKLDNLQKSSF 145 (902)
T ss_dssp CEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEET-------------TSCEEEEETTTTEEEEEEECCHHHHHT
T ss_pred CeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcC-------------CCcEEEEECCCCccccceecccccccc
Confidence 45666777 5543 34444556789999999999987753 367899999876543111000000 0
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc---------------
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL--------------- 215 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~--------------- 215 (459)
.+. .-...+..+.|+|++...|+ +...| ..| +++. ..++.......
T Consensus 146 ~~~---~h~~~V~sl~~sp~~~~~l~-~g~~d-----------g~v-lWd~---~~~~~~~~~~~~~~~g~~~~~~~~~~ 206 (902)
T 2oaj_A 146 FPA---ARLSPIVSIQWNPRDIGTVL-ISYEY-----------VTL-TYSL---VENEIKQSFIYELPPFAPGGDFSEKT 206 (902)
T ss_dssp CSS---SCCCCCCEEEEETTEEEEEE-EECSS-----------CEE-EEET---TTTEEEEEECCCBCTTCCCSTTCCCT
T ss_pred ccc---cCCCCeEEEEEccCCCCEEE-EEeCC-----------CcE-EEEC---CCCceEEEEecccCCcCCCccccccc
Confidence 011 11235678999998653444 32211 234 5554 22222221111
Q ss_pred ----cceeccceeCCCCcEEEEEeecCCccEEEEEE
Q 012630 216 ----DLRFRGVSWCDDSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 216 ----~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v 247 (459)
......+.|+|||..|+... .++..++|-+
T Consensus 207 ~~~h~~~V~~v~fspdg~~lasgs--~Dg~i~lWd~ 240 (902)
T 2oaj_A 207 NEKRTPKVIQSLYHPNSLHIITIH--EDNSLVFWDA 240 (902)
T ss_dssp TSCBCCCEEEEEECTTSSEEEEEE--TTCCEEEEET
T ss_pred ccccCCCeEEEEEcCCCCEEEEEE--CCCeEEEEEC
Confidence 12356689999987777654 2445555544
No 171
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=95.51 E-value=0.011 Score=55.30 Aligned_cols=63 Identities=11% Similarity=-0.011 Sum_probs=32.6
Q ss_pred cceEEEECCCcceeecccccCCCCCCcCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 370 TQYWIQSWPHKKCRQITDFPHPYPLLSTLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 370 ~ely~~~~~~g~~~~LT~~~~~~~~~~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
++.|.+. .|+.|.++..+.. .+.++...|.......||.+|+|+|++|++- + +.|+||++.+-
T Consensus 3 ~~~~~~~--~~~~r~~~~~~~~-~~~~~~~~e~~~~~~~dG~~i~g~l~~P~~~---~--~~p~Vl~~HG~ 65 (259)
T 4ao6_A 3 GSHHHHH--HGSMRHQMSWNGK-DERKLSVQERGFSLEVDGRTVPGVYWSPAEG---S--SDRLVLLGHGG 65 (259)
T ss_dssp ----------------CEECSC-CEEETTEEEEEEEEEETTEEEEEEEEEESSS---C--CSEEEEEEC--
T ss_pred Ccccccc--cCcceeeeccCCC-ccccCCceEEEEEEeeCCeEEEEEEEeCCCC---C--CCCEEEEeCCC
Confidence 3455544 6778877776543 2334444444444456999999999999762 2 67999998763
No 172
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.49 E-value=0.16 Score=50.90 Aligned_cols=131 Identities=9% Similarity=0.008 Sum_probs=75.7
Q ss_pred hcceEEEcC-CCcee-----ec-CCCceeeecccCCC---CCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeee
Q 012630 74 TTQLVLATL-DGTVK-----EF-GPPAIYTAVEPSPD---QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQL 142 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-----~l-~~~~~~~~~~~SPD---G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~l 142 (459)
.+.++++++ +++.. .+ +....+..+.|||| |++|+..+. ...+.+||+..+ .+..+
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~-------------d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR-------------DEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET-------------TSCEEEEEESCTTCEEEE
T ss_pred CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC-------------CCcEEEEECCCCceeeee
Confidence 356888888 55443 22 23455678999999 888876652 367899997643 33332
Q ss_pred ecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc--------
Q 012630 143 CELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK-------- 214 (459)
Q Consensus 143 t~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~-------- 214 (459)
.. .-...+..+.|+ |+. .|+... .| ..|++++. ..++......
T Consensus 237 ~~------------~h~~~v~~~~~s-d~~-~l~s~~-~d-----------~~v~vwd~---~~~~~~~~~~~~~~~~~~ 287 (450)
T 2vdu_B 237 LF------------GHKHFVSSICCG-KDY-LLLSAG-GD-----------DKIFAWDW---KTGKNLSTFDYNSLIKPY 287 (450)
T ss_dssp CC------------CCSSCEEEEEEC-STT-EEEEEE-SS-----------SEEEEEET---TTCCEEEEEECHHHHGGG
T ss_pred ec------------CCCCceEEEEEC-CCC-EEEEEe-CC-----------CeEEEEEC---CCCcEeeeecchhhhhhh
Confidence 11 112356788999 888 665432 21 24555555 3223222211
Q ss_pred ------------------ccceeccceeCCCCcEEEEEeecCCccEEEEEE
Q 012630 215 ------------------LDLRFRGVSWCDDSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 215 ------------------~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v 247 (459)
.......+.|++|+..|+.... .++..++|.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-~d~~i~iw~~ 337 (450)
T 2vdu_B 288 LNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE-ATKCIIILEM 337 (450)
T ss_dssp CCTTSBC----------CBCCCEEEEEECSSSSEEEEEET-TCSEEEEEEE
T ss_pred hhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC-CCCeEEEEEe
Confidence 1223556889998765554431 2456777777
No 173
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.48 E-value=1.9 Score=41.42 Aligned_cols=115 Identities=9% Similarity=0.076 Sum_probs=64.2
Q ss_pred CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEec
Q 012630 91 PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRA 169 (459)
Q Consensus 91 ~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~Wsp 169 (459)
..+.+..++|||||++|+-.+. ...+.|||.. +.....+... ...+..+.|+|
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s~-------------Dg~v~vWd~~~~~~~~~~~~~-------------~~~v~~~~~sp 116 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSSQ-------------DGKVIVWDSFTTNKEHAVTMP-------------CTWVMACAYAP 116 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTCCEEEEEECS-------------SSCCCEEEECT
T ss_pred CCCeEEEEEECCCCCEEEEEeC-------------CCeEEEEECCCCCcceEEecC-------------CCCEEEEEECC
Confidence 3456789999999998876652 3678999965 4444433221 12456789999
Q ss_pred CCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCC-----CceEeccccceeccceeCCCCcEEEEEeecCCccEEE
Q 012630 170 DRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE-----EPEILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRT 244 (459)
Q Consensus 170 Dg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~-----~~~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~l 244 (459)
||. .|+-. .. |. .-.+|.+.. ... ..+.+..-......+.|++++..|+.... ++..++
T Consensus 117 ~g~-~lasg-~~---d~------~i~v~~~~~---~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~--D~~v~l 180 (354)
T 2pbi_B 117 SGC-AIACG-GL---DN------KCSVYPLTF---DKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG--DGTCAL 180 (354)
T ss_dssp TSS-EEEEE-ST---TS------EEEEEECCC---CTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET--TSEEEE
T ss_pred CCC-EEEEe-eC---CC------CEEEEEEec---cccccccccceeeeccCCcEEEEEEeCCCCEEEEEeC--CCcEEE
Confidence 998 55422 11 11 113333322 210 11222222334566889998866665542 455556
Q ss_pred EEE
Q 012630 245 WLI 247 (459)
Q Consensus 245 y~v 247 (459)
|-+
T Consensus 181 wd~ 183 (354)
T 2pbi_B 181 WDV 183 (354)
T ss_dssp EET
T ss_pred EeC
Confidence 644
No 174
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.42 E-value=0.19 Score=47.01 Aligned_cols=115 Identities=11% Similarity=0.045 Sum_probs=64.6
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-e-eeeecccccccccccccccccceeeeEEec
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-V-RQLCELPLVENIPIAYNSVREGMRLISWRA 169 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~-~~lt~~p~~~~~P~~~~~~~~~~r~~~Wsp 169 (459)
.+.+..++|||||++|+..+. ...+.+||+..+. . +.+.... .-...+..+.|+|
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iw~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~ 67 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSS-------------DQHIKVFKLDKDTSNWELSDSWR----------AHDSSIVAIDWAS 67 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEET-------------TSEEEEEEECSSSCCEEEEEEEE----------CCSSCEEEEEECC
T ss_pred ccceeEEEEcCCCCEEEEeeC-------------CCeEEEEECCCCCCcceecceec----------cCCCcEEEEEEcC
Confidence 455789999999999877752 3678999976432 1 1111111 1233567899999
Q ss_pred --CCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCC----------ceEeccccceeccceeCCC--CcEEEEEe
Q 012630 170 --DRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE----------PEILHKLDLRFRGVSWCDD--SLALVQET 235 (459)
Q Consensus 170 --Dg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~----------~~~L~~~~~~~~~~~Ws~D--~~al~~~~ 235 (459)
|+. .|+.. ..|+ .|.+++. ..++ ...+.........+.|+++ +..|+...
T Consensus 68 ~~d~~-~l~s~-~~dg-----------~v~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 131 (351)
T 3f3f_A 68 PEYGR-IIASA-SYDK-----------TVKLWEE---DPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG 131 (351)
T ss_dssp GGGCS-EEEEE-ETTS-----------CEEEEEE---CTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred CCCCC-EEEEE-cCCC-----------eEEEEec---CCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec
Confidence 566 55532 2222 3444444 2211 1122223444667899998 76666544
Q ss_pred ecCCccEEEEEE
Q 012630 236 WFKTTQTRTWLI 247 (459)
Q Consensus 236 ~~~~~~~~ly~v 247 (459)
.++..++|-+
T Consensus 132 --~dg~v~iwd~ 141 (351)
T 3f3f_A 132 --NDGILRLYDA 141 (351)
T ss_dssp --TTCEEEEEEC
T ss_pred --CCCcEEEecC
Confidence 2444555544
No 175
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.38 E-value=0.37 Score=47.62 Aligned_cols=117 Identities=14% Similarity=0.126 Sum_probs=72.4
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
.+.+..+.|+|++..++++... .....|.+||+..+.. ..+.. ...+....|+|+
T Consensus 276 ~~~V~~~~~~p~~~~~la~~~g----------s~D~~I~iwd~~t~~~~~~~~~--------------~~~v~~~~~~~~ 331 (420)
T 4gga_A 276 QGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNVCSGACLSAVDA--------------HSQVCSILWSPH 331 (420)
T ss_dssp SSCEEEEEECTTCTTEEEEEEC----------TTTCEEEEEETTTTEEEEEEEC--------------SSCEEEEEEETT
T ss_pred CCceeeeeeCCCcccEEEEEee----------cCCCEEEEEeCCccccceeecc--------------ccceeeeeecCC
Confidence 4456789999999888776421 1236789999875443 33322 224567899999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-EeccccceeccceeCCCCcEEEEEeecCCccEEEEEEc
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~ 248 (459)
+. .|+.+... ....|++++. + ++ +.. .|..-...+..++|+|||..|++.. .++..++|.+.
T Consensus 332 ~~-~lv~~sg~----------~d~~I~iwd~-~-~~-~~v~~l~gH~~~V~~l~~spdg~~l~S~s--~D~tvriWdv~ 394 (420)
T 4gga_A 332 YK-ELISGHGF----------AQNQLVIWKY-P-TM-AKVAELKGHTSRVLSLTMSPDGATVASAA--ADETLRLWRCF 394 (420)
T ss_dssp TT-EEEEEECT----------TTCCEEEEET-T-TC-CEEEEECCCSSCEEEEEECTTSSCEEEEE--TTTEEEEECCS
T ss_pred CC-eEEEEEec----------CCCEEEEEEC-C-CC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEe--cCCeEEEEECC
Confidence 99 55543210 1235777776 2 23 333 3332244567789999997777655 35667888764
No 176
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.38 E-value=0.31 Score=46.70 Aligned_cols=144 Identities=16% Similarity=0.204 Sum_probs=82.1
Q ss_pred hcceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 74 TTQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
...|.++|+ +++.. .+........+.++|||+ |++++... +. ..++..-...++++|.+++++......+.
T Consensus 151 ~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~-~~-~~~~~~~~~~v~~id~~t~~v~~~~~~~~---- 223 (328)
T 3dsm_A 151 QNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK-MWTITDGG-YE-GSPYGYEAPSLYRIDAETFTVEKQFKFKL---- 223 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-EEEEBCCB-CT-TCSSCBCCCEEEEEETTTTEEEEEEECCT----
T ss_pred CCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-EEEEECCC-cc-CCccccCCceEEEEECCCCeEEEEEecCC----
Confidence 457889998 67654 333333346889999998 55554321 11 11121223679999987555442222211
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce--Eeccc-cceeccceeCC-C
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE--ILHKL-DLRFRGVSWCD-D 227 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~--~L~~~-~~~~~~~~Ws~-D 227 (459)
...++.+.++||++ .||.+. . .|++++. ..++.. .+... .....+++++| +
T Consensus 224 -------g~~p~~la~~~d~~-~lyv~~---~-----------~v~~~d~---~t~~~~~~~~~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 224 -------GDWPSEVQLNGTRD-TLYWIN---N-----------DIWRMPV---EADRVPVRPFLEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp -------TCCCEEEEECTTSC-EEEEES---S-----------SEEEEET---TCSSCCSSCSBCCCSSCEEEEEECTTT
T ss_pred -------CCCceeEEEecCCC-EEEEEc---c-----------EEEEEEC---CCCceeeeeeecCCCCceEEEEEcCCC
Confidence 12567899999998 676542 1 5777776 433421 11111 23345678888 4
Q ss_pred CcEEEEEeecC-CccEEEEEEcCC
Q 012630 228 SLALVQETWFK-TTQTRTWLISPG 250 (459)
Q Consensus 228 ~~al~~~~~~~-~~~~~ly~v~~~ 250 (459)
+.+++.... + .....|++++++
T Consensus 279 g~lyva~~~-~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 279 GEVYVADAI-DYQQQGIVYRYSPQ 301 (328)
T ss_dssp CCEEEEECT-TSSSEEEEEEECTT
T ss_pred CeEEEEccc-ccccCCEEEEECCC
Confidence 677776520 1 234568888876
No 177
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.38 E-value=4 Score=44.44 Aligned_cols=138 Identities=9% Similarity=0.083 Sum_probs=79.2
Q ss_pred HhhcceEEEcC-CCceeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce----eeeeecc
Q 012630 72 YTTTQLVLATL-DGTVKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF----VRQLCEL 145 (459)
Q Consensus 72 ~~~sqL~~v~~-~G~~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~----~~~lt~~ 145 (459)
.....|..+++ +++...+.. ......+.+.+.+.+|.++-. ....|+.++++|.. ...+...
T Consensus 401 an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~------------~~~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 401 TNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------------SQRMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp ECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEET------------TTTEEEEEEC--------CEEEECS
T ss_pred ccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeec------------cceeEEEEeccCCCCCcceeEEEec
Confidence 34567788888 455555443 334467888888888877642 23567788877632 2222221
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceecccee
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSW 224 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~W 224 (459)
. ...+..++..+.+. .|||+.. ....|++++. +|...+.|.... ..-.+|+.
T Consensus 469 ~------------l~~P~GLAvD~~~~-~LY~tD~-----------~~~~I~v~~l---dG~~~~~l~~~~l~~P~gIaV 521 (791)
T 3m0c_C 469 D------------IQAPDGLAVDWIHS-NIYWTDS-----------VLGTVSVADT---KGVKRKTLFRENGSKPRAIVV 521 (791)
T ss_dssp S------------CSCCCEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSSSEEEEEECTTCCEEEEEE
T ss_pred C------------CCCcceeeeeecCC-cEEEEec-----------CCCeEEEEeC---CCCeEEEEEeCCCCCcceEEE
Confidence 1 12344566666666 8998852 2457888888 775555555422 22455777
Q ss_pred CCC-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 225 CDD-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 225 s~D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
.+. +.+++.+ | ....+|+++++++
T Consensus 522 Dp~~g~LYwtD-~--g~~~~I~~~~~dG 546 (791)
T 3m0c_C 522 DPVHGFMYWTD-W--GTPAKIKKGGLNG 546 (791)
T ss_dssp ETTTTEEEEEE-C--SSSCEEEEEETTS
T ss_pred ecCCCCEEEec-C--CCCCeEEEEecCC
Confidence 765 5444443 2 2235799998874
No 178
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.30 E-value=0.29 Score=47.60 Aligned_cols=144 Identities=10% Similarity=0.160 Sum_probs=75.9
Q ss_pred hcceEEEcC-CCc-------eeec----CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-e
Q 012630 74 TTQLVLATL-DGT-------VKEF----GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-R 140 (459)
Q Consensus 74 ~sqL~~v~~-~G~-------~~~l----~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~ 140 (459)
.+.|.++++ +++ ...+ .....+..+.|||||..++++.. ....+.+||+..+.. .
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~------------~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG------------SSNFASIWDLKAKKEVI 202 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES------------SSSCEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc------------CCCCEEEEECCCCCcce
Confidence 356777787 554 1122 12345678999999555545532 236789999875443 3
Q ss_pred eeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCC-CCceEecc--ccc
Q 012630 141 QLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG-EEPEILHK--LDL 217 (459)
Q Consensus 141 ~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g-~~~~~L~~--~~~ 217 (459)
.+... .. .......+..+.|+|++...|+ +...|+.+ ..|++++. .. ..+..... ...
T Consensus 203 ~~~~~-~~------~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~~--------~~i~~~d~---~~~~~~~~~~~~~~~~ 263 (416)
T 2pm9_A 203 HLSYT-SP------NSGIKQQLSVVEWHPKNSTRVA-TATGSDND--------PSILIWDL---RNANTPLQTLNQGHQK 263 (416)
T ss_dssp EECCC-CC------SSCCCCCEEEEEECSSCTTEEE-EEECCSSS--------CCCCEEET---TSTTSCSBCCCSCCSS
T ss_pred EEecc-cc------ccccCCceEEEEECCCCCCEEE-EEECCCCC--------ceEEEEeC---CCCCCCcEEeecCccC
Confidence 33221 00 0011345678999999874444 43333311 13444444 21 12322222 334
Q ss_pred eeccceeCC-CCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 218 RFRGVSWCD-DSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 218 ~~~~~~Ws~-D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
....+.|++ |+..|+.... ++. +.+.++.++
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~--dg~--v~~wd~~~~ 295 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGR--DNT--VLLWNPESA 295 (416)
T ss_dssp CEEEEEECSSCSSCEEEEES--SSE--EEEECSSSC
T ss_pred ceeEEEeCCCCCCeEEEEeC--CCC--EEEeeCCCC
Confidence 466789998 7766665442 333 455565543
No 179
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.28 E-value=0.34 Score=45.38 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=64.2
Q ss_pred CceeeecccCCC-------------CCeEEEEEeccCcccccccCCCCcceEEEecCCce-ee-eeeccccccccccccc
Q 012630 92 PAIYTAVEPSPD-------------QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VR-QLCELPLVENIPIAYN 156 (459)
Q Consensus 92 ~~~~~~~~~SPD-------------G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~-~lt~~p~~~~~P~~~~ 156 (459)
...+..++|||+ |++|+..+. ...+.+||+..+. .. .+..+.
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~-------------D~~v~lwd~~~~~~~~~~~~~l~---------- 201 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-------------DNLVKIWKYNSDAQTYVLESTLE---------- 201 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEET-------------TSCEEEEEEETTTTEEEEEEEEC----------
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcC-------------CCcEEEEEEcCCCceEEEEEEec----------
Confidence 344578999998 456655542 3678899875332 11 111111
Q ss_pred ccccceeeeEEecCC--CceEEEEEeccCCccccccCCCCeEEeccCCCCCCC--C-ceEec---cccceeccceeCCCC
Q 012630 157 SVREGMRLISWRADR--PSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE--E-PEILH---KLDLRFRGVSWCDDS 228 (459)
Q Consensus 157 ~~~~~~r~~~WspDg--~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~--~-~~~L~---~~~~~~~~~~Ws~D~ 228 (459)
.-...++.+.|+||+ ...|+ ....|+ .|.+++. ..+ . ...+. ........+.|++|+
T Consensus 202 ~H~~~V~~v~~sp~~~~~~~la-s~s~D~-----------~v~iWd~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 266 (297)
T 2pm7_B 202 GHSDWVRDVAWSPTVLLRSYMA-SVSQDR-----------TCIIWTQ---DNEQGPWKKTLLKEEKFPDVLWRASWSLSG 266 (297)
T ss_dssp CCSSCEEEEEECCCCSSSEEEE-EEETTS-----------CEEEEEE---SSTTSCCEEEESSSSCCSSCEEEEEECSSS
T ss_pred CCCCceEEEEECCCCCCceEEE-EEECCC-----------cEEEEEe---CCCCCccceeeeecccCCCcEEEEEECCCC
Confidence 112356789999997 32444 222222 2334433 111 1 11222 122335568999998
Q ss_pred cEEEEEeecCCccEEEEEEcCC
Q 012630 229 LALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v~~~ 250 (459)
..|+... .++..++|.++..
T Consensus 267 ~~las~~--~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 267 NVLALSG--GDNKVTLWKENLE 286 (297)
T ss_dssp CCEEEEE--TTSCEEEEEECTT
T ss_pred CEEEEEc--CCCcEEEEEECCC
Confidence 7776554 2567889988654
No 180
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.27 E-value=0.078 Score=53.49 Aligned_cols=124 Identities=10% Similarity=0.054 Sum_probs=65.5
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc------eeeeeecccccccccccccccccceeee
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK------FVRQLCELPLVENIPIAYNSVREGMRLI 165 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~------~~~~lt~~p~~~~~P~~~~~~~~~~r~~ 165 (459)
+..+..++|||||++|++.... ......+.|||+... ..+.+..... +..-...+..+
T Consensus 92 ~~~v~~l~~spdg~~lav~~~s---------gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~-------~~~h~~~V~~v 155 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMS---------SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKL-------LKDAGGMVIDM 155 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEE---------TTTEEEEEEEEHHHHHCTTCSSCCCSEEEEC-------CCSGGGSEEEE
T ss_pred CCcccEEEEcCCCCEEEEEEec---------cCCCceEEEEEccccccCCcCCcceeeeeec-------cCCCCCceEEE
Confidence 4456899999999999874210 012467889987532 1011110000 00112356789
Q ss_pred EEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-EeccccceeccceeCCCCcEEEEEeecCCccEEE
Q 012630 166 SWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRT 244 (459)
Q Consensus 166 ~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~l 244 (459)
.|+|+....|+-. ..| ..|++++. ..+... ...........+.|++||..|+.... ++. +
T Consensus 156 ~~~p~~~~~las~-s~D-----------g~v~iwD~---~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~--dg~--v 216 (434)
T 2oit_A 156 KWNPTVPSMVAVC-LAD-----------GSIAVLQV---TETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ--NGT--V 216 (434)
T ss_dssp EECSSCTTEEEEE-ETT-----------SCEEEEEE---SSSEEEEEEECGGGCEEEEEECTTSSCEEEEET--TSC--E
T ss_pred EECCCCCCEEEEE-ECC-----------CeEEEEEc---CCCcceeeccCCCCceeEEEEcCCCCEEEEEcC--CCc--E
Confidence 9999965355533 222 24666666 322211 11112334677899999866665442 333 4
Q ss_pred EEEcCC
Q 012630 245 WLISPG 250 (459)
Q Consensus 245 y~v~~~ 250 (459)
.++++.
T Consensus 217 ~iwd~~ 222 (434)
T 2oit_A 217 VQYLPT 222 (434)
T ss_dssp EEECTT
T ss_pred EEEccC
Confidence 445554
No 181
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.27 E-value=2.2 Score=40.85 Aligned_cols=137 Identities=10% Similarity=0.053 Sum_probs=78.3
Q ss_pred hhcceEEEcCCCc---eee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeecccc
Q 012630 73 TTTQLVLATLDGT---VKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCELPL 147 (459)
Q Consensus 73 ~~sqL~~v~~~G~---~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~p~ 147 (459)
.+..|.+++++|. ... +..-.....+.|.+.++.|.++-. ....|+.++.+|+.. ..+....
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~------------~~~~I~r~~~~g~~~~~~~~~~~- 77 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------------SEEAIKRTEFNKTESVQNVVVSG- 77 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET------------TTTEEEEEETTSSSCCCEEEEEC-
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC------------CCCcEEEEEccCCCceEEEEcCC-
Confidence 4567888898443 222 222233457889998888877732 235678888877632 1111110
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc-cceeccceeCC
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL-DLRFRGVSWCD 226 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~-~~~~~~~~Ws~ 226 (459)
-..+..+...+.+. .|||+... .+.|++++. +|...+.|... ...-.+++..+
T Consensus 78 -----------l~~p~glavd~~~g-~ly~~d~~-----------~~~I~~~~~---dG~~~~~l~~~~~~~P~giavdp 131 (318)
T 3sov_A 78 -----------LLSPDGLACDWLGE-KLYWTDSE-----------TNRIEVSNL---DGSLRKVLFWQELDQPRAIALDP 131 (318)
T ss_dssp -----------CSCCCEEEEETTTT-EEEEEETT-----------TTEEEEEET---TSCSCEEEECSSCSSEEEEEEEG
T ss_pred -----------CCCccEEEEEcCCC-eEEEEECC-----------CCEEEEEEC---CCCcEEEEEeCCCCCccEEEEeC
Confidence 11344567776666 78887531 346788877 76445555432 22345566666
Q ss_pred C-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 227 D-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 227 D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
. |..++.+ + ....+|+++++++
T Consensus 132 ~~g~ly~td-~--~~~~~I~r~~~dG 154 (318)
T 3sov_A 132 SSGFMYWTD-W--GEVPKIERAGMDG 154 (318)
T ss_dssp GGTEEEEEE-C--SSSCEEEEEETTS
T ss_pred CCCEEEEEe-c--CCCCEEEEEEcCC
Confidence 4 4444443 2 2346799999874
No 182
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.26 E-value=0.29 Score=45.36 Aligned_cols=110 Identities=8% Similarity=0.038 Sum_probs=65.3
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
...+..+.|||||+ |+..+. ...+.+||+. +..+..+... ...+..+.|+||
T Consensus 184 ~~~i~~~~~~~~~~-~~~~~~-------------dg~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~ 236 (313)
T 3odt_A 184 NDVVRHLAVVDDGH-FISCSN-------------DGLIKLVDMHTGDVLRTYEGH-------------ESFVYCIKLLPN 236 (313)
T ss_dssp SSCEEEEEEEETTE-EEEEET-------------TSEEEEEETTTCCEEEEEECC-------------SSCEEEEEECTT
T ss_pred cccEEEEEEcCCCe-EEEccC-------------CCeEEEEECCchhhhhhhhcC-------------CceEEEEEEecC
Confidence 45567899999999 544432 3678999986 4444444221 235668999999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc-ccceeccceeCCCCcEEEEEeecCCccEEEEEEc
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK-LDLRFRGVSWCDDSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~-~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~ 248 (459)
+. |+ +... ...|++++. ..++...... .......+.|++|+..+.. . .++..++|.+.
T Consensus 237 ~~--l~-~~~~-----------dg~v~iwd~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~--~dg~i~iw~~~ 295 (313)
T 3odt_A 237 GD--IV-SCGE-----------DRTVRIWSK---ENGSLKQVITLPAISIWSVDCMSNGDIIVG-S--SDNLVRIFSQE 295 (313)
T ss_dssp SC--EE-EEET-----------TSEEEEECT---TTCCEEEEEECSSSCEEEEEECTTSCEEEE-E--TTSCEEEEESC
T ss_pred CC--EE-EEec-----------CCEEEEEEC---CCCceeEEEeccCceEEEEEEccCCCEEEE-e--CCCcEEEEeCC
Confidence 84 33 2221 235777776 3334443332 3335677899999864433 2 24556666654
No 183
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.25 E-value=0.45 Score=44.98 Aligned_cols=135 Identities=11% Similarity=0.034 Sum_probs=75.0
Q ss_pred hcceEEEcC-CCc--eeecCC-Cceeeec------ccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce--eee
Q 012630 74 TTQLVLATL-DGT--VKEFGP-PAIYTAV------EPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF--VRQ 141 (459)
Q Consensus 74 ~sqL~~v~~-~G~--~~~l~~-~~~~~~~------~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~--~~~ 141 (459)
.+.|.++++ +++ ...+.. ...+..+ .|||||++|+..+. ...+.+||+..+. +..
T Consensus 89 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~-------------d~~i~vwd~~~~~~~~~~ 155 (357)
T 3i2n_A 89 GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR-------------DGTVKVWDPRQKDDPVAN 155 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET-------------TSCEEEECTTSCSSCSEE
T ss_pred CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC-------------CCeEEEEeCCCCCCccee
Confidence 457888888 554 334443 3334455 78999999887753 3678999987443 333
Q ss_pred eecccccccccccccccccceeeeE----EecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc
Q 012630 142 LCELPLVENIPIAYNSVREGMRLIS----WRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL 217 (459)
Q Consensus 142 lt~~p~~~~~P~~~~~~~~~~r~~~----WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~ 217 (459)
+...... .......+. |+|++. .|+.. .. ...|++++. ..++.........
T Consensus 156 ~~~~~~~---------~~~~v~~~~~~~~~~~~~~-~l~~~-~~-----------d~~i~i~d~---~~~~~~~~~~~~~ 210 (357)
T 3i2n_A 156 MEPVQGE---------NKRDCWTVAFGNAYNQEER-VVCAG-YD-----------NGDIKLFDL---RNMALRWETNIKN 210 (357)
T ss_dssp ECCCTTS---------CCCCEEEEEEECCCC-CCC-EEEEE-ET-----------TSEEEEEET---TTTEEEEEEECSS
T ss_pred ccccCCC---------CCCceEEEEEEeccCCCCC-EEEEE-cc-----------CCeEEEEEC---ccCceeeecCCCC
Confidence 3221110 012334455 889988 55533 11 135777776 4335444444455
Q ss_pred eeccceeCC---CCcEEEEEeecCCccEEEEEEc
Q 012630 218 RFRGVSWCD---DSLALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 218 ~~~~~~Ws~---D~~al~~~~~~~~~~~~ly~v~ 248 (459)
....+.|++ ++..|+... .++..++|-+.
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~ 242 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATS--LEGKFHVFDMR 242 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEE--STTEEEEEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEEC--CCCeEEEEeCc
Confidence 677789998 775555543 24455555553
No 184
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.25 E-value=1.8 Score=41.38 Aligned_cols=114 Identities=12% Similarity=0.093 Sum_probs=72.0
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceE
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTL 175 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l 175 (459)
.++++.+.+..|.++-. ....|++++++|...+.+.... -..++.+...|.+. .|
T Consensus 82 ~glavd~~~g~ly~~d~------------~~~~I~~~~~dG~~~~~l~~~~------------~~~P~giavdp~~g-~l 136 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDS------------ETNRIEVSNLDGSLRKVLFWQE------------LDQPRAIALDPSSG-FM 136 (318)
T ss_dssp CEEEEETTTTEEEEEET------------TTTEEEEEETTSCSCEEEECSS------------CSSEEEEEEEGGGT-EE
T ss_pred cEEEEEcCCCeEEEEEC------------CCCEEEEEECCCCcEEEEEeCC------------CCCccEEEEeCCCC-EE
Confidence 35677777777766631 2367888999887655553311 23567888888877 88
Q ss_pred EEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc-eeccceeCCCC-cEEEEEeecCCccEEEEEEcCCC
Q 012630 176 YWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL-RFRGVSWCDDS-LALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 176 ~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~-~~~~~~Ws~D~-~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
||+.. + ....|+.++. +|...+.+..... .-.+++|++++ ..++.+. ...+|++++.++
T Consensus 137 y~td~---~-------~~~~I~r~~~---dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~----~~~~I~~~d~dG 197 (318)
T 3sov_A 137 YWTDW---G-------EVPKIERAGM---DGSSRFIIINSEIYWPNGLTLDYEEQKLYWADA----KLNFIHKSNLDG 197 (318)
T ss_dssp EEEEC---S-------SSCEEEEEET---TSCSCEEEECSSCSCEEEEEEETTTTEEEEEET----TTTEEEEEETTS
T ss_pred EEEec---C-------CCCEEEEEEc---CCCCeEEEEECCCCCccEEEEeccCCEEEEEEC----CCCEEEEEcCCC
Confidence 98752 1 1347888888 7745555543322 24568999864 4444432 334689998874
No 185
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=95.24 E-value=0.025 Score=54.07 Aligned_cols=42 Identities=26% Similarity=0.452 Sum_probs=36.9
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
..++.+.++|++.+| ++..+||+|++|++++ +||+|++++..
T Consensus 37 ~~g~~~~~~~~s~~~-~~~~~vy~P~~~~~~~--~~Pvlv~lHG~ 78 (297)
T 1gkl_A 37 QAGRIVKETYTGING-TKSLNVYLPYGYDPNK--KYNIFYLMHGG 78 (297)
T ss_dssp SCCEEEEEEEEETTE-EEEEEEEECTTCCTTS--CCEEEEEECCT
T ss_pred CCceEEEEEEEcCCC-EEEEEEEeCCCCCCCC--CCCEEEEECCC
Confidence 457889999999998 9999999999998755 89999999875
No 186
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.22 E-value=0.071 Score=50.53 Aligned_cols=60 Identities=8% Similarity=-0.006 Sum_probs=41.0
Q ss_pred CCceeeecccCCCCC-eEEEEEeccCcccccccCCCCcceEEEec-CCceeeeeecccccccccccccccccceeeeEEe
Q 012630 91 PPAIYTAVEPSPDQK-YILITSIDRPYSFTVSYTKFPQKVQVWTA-DGKFVRQLCELPLVENIPIAYNSVREGMRLISWR 168 (459)
Q Consensus 91 ~~~~~~~~~~SPDG~-~l~~~~~~~p~s~~v~~~~~~~~~~v~d~-~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~Ws 168 (459)
....+..+.|||||+ +|+..+. ...+.+||+ .++....+... .-...+..+.|+
T Consensus 55 ~~~~v~~~~~~~~~~~~l~~~~~-------------dg~i~~wd~~~~~~~~~~~~~-----------~~~~~v~~l~~~ 110 (342)
T 1yfq_A 55 YKHPLLCCNFIDNTDLQIYVGTV-------------QGEILKVDLIGSPSFQALTNN-----------EANLGICRICKY 110 (342)
T ss_dssp CSSCEEEEEEEESSSEEEEEEET-------------TSCEEEECSSSSSSEEECBSC-----------CCCSCEEEEEEE
T ss_pred cCCceEEEEECCCCCcEEEEEcC-------------CCeEEEEEeccCCceEecccc-----------CCCCceEEEEeC
Confidence 345568999999999 8877652 367899999 87766444321 013356789999
Q ss_pred cCCCceEE
Q 012630 169 ADRPSTLY 176 (459)
Q Consensus 169 pDg~~~l~ 176 (459)
| +. .|+
T Consensus 111 ~-~~-~l~ 116 (342)
T 1yfq_A 111 G-DD-KLI 116 (342)
T ss_dssp T-TT-EEE
T ss_pred C-CC-EEE
Confidence 9 55 555
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.22 E-value=0.18 Score=49.36 Aligned_cols=115 Identities=12% Similarity=0.021 Sum_probs=58.0
Q ss_pred cceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCC
Q 012630 127 QKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG 206 (459)
Q Consensus 127 ~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g 206 (459)
..++++|+.++.+..+...++...........+.+.+.+.++||++ +||.+...++.....+ .....|+++|+ ..
T Consensus 221 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~-~lyv~~~~~~~~~~~~-~~~~~v~viD~---~t 295 (361)
T 2oiz_A 221 GNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG-RMYVFMHPDGKEGTHK-FPAAEIWVMDT---KT 295 (361)
T ss_dssp SEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTT-EEEEEEESSCCTTCTT-CCCSEEEEEET---TT
T ss_pred CeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCC-eEEEEEccCCCccccc-CCCceEEEEEC---CC
Confidence 4578888765544333221111000000001123455688999988 6664433222210000 11347899988 43
Q ss_pred CCceEeccccceeccceeCCCCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 207 EEPEILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 207 ~~~~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
++...-..... ..++.+++||..|+...+ ..|.++|++++
T Consensus 296 ~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-----~~v~v~D~~t~ 335 (361)
T 2oiz_A 296 KQRVARIPGRD-ALSMTIDQQRNLMLTLDG-----GNVNVYDISQP 335 (361)
T ss_dssp TEEEEEEECTT-CCEEEEETTTTEEEEECS-----SCEEEEECSSS
T ss_pred CcEEEEEecCC-eeEEEECCCCCEEEEeCC-----CeEEEEECCCC
Confidence 33333223344 677899999864443332 34778888764
No 188
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.19 E-value=2.2 Score=40.52 Aligned_cols=136 Identities=14% Similarity=0.033 Sum_probs=81.4
Q ss_pred hcceEEEcCCC-----ceeecCC-C-ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccc
Q 012630 74 TTQLVLATLDG-----TVKEFGP-P-AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELP 146 (459)
Q Consensus 74 ~sqL~~v~~~G-----~~~~l~~-~-~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p 146 (459)
...|+++++.| ..+.+.. . ....++++.+.++.|.++-. ....|.+++++|...+.+....
T Consensus 51 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~------------~~~~I~~~~~~g~~~~~~~~~~ 118 (316)
T 1ijq_A 51 QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS------------VLGTVSVADTKGVKRKTLFREN 118 (316)
T ss_dssp TTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET------------TTTEEEEEETTSSSEEEEEECT
T ss_pred CCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC------------CCCEEEEEeCCCCceEEEEECC
Confidence 45677777733 2232222 1 22346778888888866631 2467889999887666554321
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc-eeccceeC
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL-RFRGVSWC 225 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~-~~~~~~Ws 225 (459)
-..++.+.-.|++. .|||+.. +. ...|+.++. +|...+.+..... .-.+++|+
T Consensus 119 ------------~~~P~~iavdp~~g-~ly~~d~---~~-------~~~I~~~~~---dG~~~~~~~~~~~~~P~gla~d 172 (316)
T 1ijq_A 119 ------------GSKPRAIVVDPVHG-FMYWTDW---GT-------PAKIKKGGL---NGVDIYSLVTENIQWPNGITLD 172 (316)
T ss_dssp ------------TCCEEEEEEETTTT-EEEEEEC---SS-------SCEEEEEET---TSCCEEEEECSSCSCEEEEEEE
T ss_pred ------------CCCcceEEeCCCCC-EEEEEcc---CC-------CCeEEEEcC---CCCCeEEEEECCCCCceEEEEe
Confidence 12567888898877 8998853 11 247888888 7744444543222 24568898
Q ss_pred CCC-cEEEEEeecCCccEEEEEEcCCC
Q 012630 226 DDS-LALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 226 ~D~-~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
+++ ..++.+. ...+|++++.++
T Consensus 173 ~~~~~lY~~D~----~~~~I~~~d~dg 195 (316)
T 1ijq_A 173 LLSGRLYWVDS----KLHSISSIDVNG 195 (316)
T ss_dssp TTTTEEEEEET----TTTEEEEEETTS
T ss_pred ccCCEEEEEEC----CCCeEEEEecCC
Confidence 764 4444432 234688998874
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.06 E-value=2.2 Score=39.74 Aligned_cols=131 Identities=14% Similarity=0.125 Sum_probs=75.2
Q ss_pred hcceEEEcC-CCcee-ecCCCc--eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccc
Q 012630 74 TTQLVLATL-DGTVK-EFGPPA--IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVE 149 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~--~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~ 149 (459)
...|+++|. +|+.. .+..+. ...++.++|||+.|+ .. ...++.+|.+|+.+..+... +
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~--------------~~~V~~~d~~G~~~W~~~~~---~ 75 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SY--------------SKGAKMITRDGRELWNIAAP---A 75 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-EC--------------BSEEEEECTTSCEEEEEECC---T
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eC--------------CCCEEEECCCCCEEEEEcCC---C
Confidence 367788888 88655 454432 457889999998665 31 24588899988777666431 0
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc-c-----ceeccce
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL-D-----LRFRGVS 223 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~-~-----~~~~~~~ 223 (459)
..........+||. +|+ +.. + ....|+.++. +|.....+.-. . .....+.
T Consensus 76 ---------~~~~~~~~~~~dG~-~lv-~~~---~-------~~~~v~~vd~---~Gk~l~~~~~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 76 ---------GCEMQTARILPDGN-ALV-AWC---G-------HPSTILEVNM---KGEVLSKTEFETGIERPHAQFRQIN 131 (276)
T ss_dssp ---------TCEEEEEEECTTSC-EEE-EEE---S-------TTEEEEEECT---TSCEEEEEEECCSCSSGGGSCSCCE
T ss_pred ---------CccccccEECCCCC-EEE-Eec---C-------CCCEEEEEeC---CCCEEEEEeccCCCCcccccccCce
Confidence 11344678899988 444 221 1 0225666666 65222222100 0 1122345
Q ss_pred eCCCCcEEEEEeecCCccEEEEEEcCC
Q 012630 224 WCDDSLALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 224 Ws~D~~al~~~~~~~~~~~~ly~v~~~ 250 (459)
..+||..|+... ....++.++++
T Consensus 132 ~~~~G~~lv~~~----~~~~v~~~d~~ 154 (276)
T 3no2_A 132 KNKKGNYLVPLF----ATSEVREIAPN 154 (276)
T ss_dssp ECTTSCEEEEET----TTTEEEEECTT
T ss_pred ECCCCCEEEEec----CCCEEEEECCC
Confidence 677876666543 22358889886
No 190
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=95.03 E-value=0.03 Score=55.36 Aligned_cols=42 Identities=12% Similarity=0.312 Sum_probs=37.3
Q ss_pred CceEEEEEECC-CCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 398 LQKELIKYQRK-DGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 398 ~~~E~i~yks~-DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
...+.++|++. ||.+|+++|++|++|++++ ++|+||+++..-
T Consensus 142 ~~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~--~~Pvvv~lHG~g 184 (380)
T 3doh_A 142 DDFLAFTFKDPETGVEIPYRLFVPKDVNPDR--KYPLVVFLHGAG 184 (380)
T ss_dssp GGEEEEEEECTTTCCEEEEEEECCSSCCTTS--CEEEEEEECCGG
T ss_pred ccccceeeccCCCCcEEEEEEEcCCCCCCCC--CccEEEEECCCC
Confidence 35788999999 9999999999999998766 899999999875
No 191
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=95.00 E-value=0.47 Score=47.14 Aligned_cols=137 Identities=12% Similarity=0.140 Sum_probs=76.1
Q ss_pred hcceEEEcC-CCc--------eeec-CCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeee
Q 012630 74 TTQLVLATL-DGT--------VKEF-GPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQL 142 (459)
Q Consensus 74 ~sqL~~v~~-~G~--------~~~l-~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~l 142 (459)
.+.|.++++ .+. ...+ .....+..++|+|++..++++.. ....+.+||+..+. .+.+
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~------------~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA------------DDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE------------TTSEEEEEETTCSCSSSCS
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe------------CCCeEEEEECCCCCCCcce
Confidence 466777777 421 1223 23455689999996655555532 23678999986431 1111
Q ss_pred ecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCC-CC-ceEeccccceec
Q 012630 143 CELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG-EE-PEILHKLDLRFR 220 (459)
Q Consensus 143 t~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g-~~-~~~L~~~~~~~~ 220 (459)
... ..-...++.+.|+|+++..|+ +...| ..|.+++. .. +. ...+........
T Consensus 271 ~~~----------~~~~~~v~~i~~~p~~~~~l~-tg~~d-----------g~v~vwd~---~~~~~~~~~~~~h~~~v~ 325 (430)
T 2xyi_A 271 HTV----------DAHTAEVNCLSFNPYSEFILA-TGSAD-----------KTVALWDL---RNLKLKLHSFESHKDEIF 325 (430)
T ss_dssp EEE----------ECCSSCEEEEEECSSCTTEEE-EEETT-----------SEEEEEET---TCTTSCSEEEECCSSCEE
T ss_pred eEe----------ecCCCCeEEEEeCCCCCCEEE-EEeCC-----------CeEEEEeC---CCCCCCeEEeecCCCCEE
Confidence 111 112346789999999984343 33222 24666665 21 13 233333344567
Q ss_pred cceeCCCC-cEEEEEeecCCccEEEEEEcC
Q 012630 221 GVSWCDDS-LALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 221 ~~~Ws~D~-~al~~~~~~~~~~~~ly~v~~ 249 (459)
.+.|++++ ..|+... .++...+|-+..
T Consensus 326 ~i~~sp~~~~~l~s~~--~d~~i~iwd~~~ 353 (430)
T 2xyi_A 326 QVQWSPHNETILASSG--TDRRLHVWDLSK 353 (430)
T ss_dssp EEEECSSCTTEEEEEE--TTSCCEEEEGGG
T ss_pred EEEECCCCCCEEEEEe--CCCcEEEEeCCC
Confidence 79999987 4455443 245667776654
No 192
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=94.96 E-value=0.22 Score=55.22 Aligned_cols=116 Identities=10% Similarity=0.065 Sum_probs=69.2
Q ss_pred eecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeE
Q 012630 87 KEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLIS 166 (459)
Q Consensus 87 ~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~ 166 (459)
..++....+..++|||||++||..+. ...|.||+..+.+....... ...+..+.
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~-------------Dg~I~lw~~~~~~~~~~~~~-------------~~~V~~l~ 65 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATV-------------TGEVHIYGQQQVEVVIKLED-------------RSAIKEMR 65 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEET-------------TSEEEEECSTTCEEEEECSS-------------CCCEEEEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeC-------------CCEEEEEeCCCcEEEEEcCC-------------CCCEEEEE
Confidence 34455666789999999999988763 36789999876554322110 23567899
Q ss_pred EecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEEEEeecCCccEEEEE
Q 012630 167 WRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWL 246 (459)
Q Consensus 167 WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~ 246 (459)
|+| |+ .|+-. .. ...|.+++. ..++...-.........+.|++|+..|+... .++..++|-
T Consensus 66 fsp-g~-~L~S~-s~-----------D~~v~lWd~---~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs--~dg~V~lwd 126 (902)
T 2oaj_A 66 FVK-GI-YLVVI-NA-----------KDTVYVLSL---YSQKVLTTVFVPGKITSIDTDASLDWMLIGL--QNGSMIVYD 126 (902)
T ss_dssp EET-TT-EEEEE-ET-----------TCEEEEEET---TTCSEEEEEECSSCEEEEECCTTCSEEEEEE--TTSCEEEEE
T ss_pred EcC-CC-EEEEE-EC-----------cCeEEEEEC---CCCcEEEEEcCCCCEEEEEECCCCCEEEEEc--CCCcEEEEE
Confidence 999 66 55533 11 124666666 3323322222333466789999986665443 234445554
Q ss_pred E
Q 012630 247 I 247 (459)
Q Consensus 247 v 247 (459)
+
T Consensus 127 ~ 127 (902)
T 2oaj_A 127 I 127 (902)
T ss_dssp T
T ss_pred C
Confidence 3
No 193
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.94 E-value=0.14 Score=48.75 Aligned_cols=116 Identities=11% Similarity=0.063 Sum_probs=66.0
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC-
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD- 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD- 170 (459)
.+.+..++|||||++|+..+. ...+.|||+..+....+..+.. -...+..+.|+++
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~-------------D~~v~lwd~~~~~~~~~~~l~g----------H~~~V~~v~~~~~~ 69 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSS-------------DRSVKIFDVRNGGQILIADLRG----------HEGPVWQVAWAHPM 69 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEET-------------TTEEEEEEEETTEEEEEEEEEC----------CSSCEEEEEECCGG
T ss_pred cCeEEEeeEcCCCCEEEEEeC-------------CCeEEEEEecCCCcEEEEEEcC----------CCccEEEEEeCCCC
Confidence 445679999999999877753 3678999986543222222211 1235678899864
Q ss_pred -CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceE---eccccceeccceeCCC--CcEEEEEeecCCccEEE
Q 012630 171 -RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEI---LHKLDLRFRGVSWCDD--SLALVQETWFKTTQTRT 244 (459)
Q Consensus 171 -g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~---L~~~~~~~~~~~Ws~D--~~al~~~~~~~~~~~~l 244 (459)
+. .|+-. ..|+ .|.+++. ..++... +..-......+.|+|+ +..|+... .++..++
T Consensus 70 ~~~-~l~s~-s~D~-----------~v~iWd~---~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs--~D~~i~l 131 (316)
T 3bg1_A 70 YGN-ILASC-SYDR-----------KVIIWRE---ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGS--SDGAISL 131 (316)
T ss_dssp GSS-CEEEE-ETTS-----------CEEEECC---SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEEC--SSSCEEE
T ss_pred CCC-EEEEE-ECCC-----------EEEEEEC---CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEc--CCCCEEE
Confidence 55 55522 2222 3556665 3223222 2222334566899987 55666544 2566777
Q ss_pred EEEc
Q 012630 245 WLIS 248 (459)
Q Consensus 245 y~v~ 248 (459)
|.+.
T Consensus 132 wd~~ 135 (316)
T 3bg1_A 132 LTYT 135 (316)
T ss_dssp EEEC
T ss_pred EecC
Confidence 7664
No 194
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.93 E-value=0.24 Score=47.37 Aligned_cols=116 Identities=15% Similarity=0.202 Sum_probs=64.5
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cc-eeeeeecccccccccccccccccceeeeEEec
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GK-FVRQLCELPLVENIPIAYNSVREGMRLISWRA 169 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~-~~~~lt~~p~~~~~P~~~~~~~~~~r~~~Wsp 169 (459)
...+..++|||||++|+..+. ...+.+||+. ++ ....+.... .-...+..+.|+|
T Consensus 107 ~~~V~~v~~sp~g~~las~s~-------------D~~v~iwd~~~~~~~~~~~~~~~----------~h~~~v~~v~~~p 163 (330)
T 2hes_X 107 ENEVKGVAWSNDGYYLATCSR-------------DKSVWIWETDESGEEYECISVLQ----------EHSQDVKHVIWHP 163 (330)
T ss_dssp --CEEEEEECTTSCEEEEEET-------------TSCEEEEECCTTCCCCEEEEEEC----------CCSSCEEEEEECS
T ss_pred CCcEEEEEECCCCCEEEEEeC-------------CCEEEEEeccCCCCCeEEEEEec----------cCCCceEEEEECC
Confidence 445678999999999987753 3678999983 32 112222111 1123567899999
Q ss_pred CCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce---EeccccceeccceeCCC--CcEEEEEeecCCccEEE
Q 012630 170 DRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE---ILHKLDLRFRGVSWCDD--SLALVQETWFKTTQTRT 244 (459)
Q Consensus 170 Dg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~---~L~~~~~~~~~~~Ws~D--~~al~~~~~~~~~~~~l 244 (459)
|+. .|+-. ..|+ .|.+++. ..+... .+..-......+.|+++ +..|+... .++..++
T Consensus 164 ~~~-~l~s~-s~D~-----------~i~iW~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s--~D~~v~i 225 (330)
T 2hes_X 164 SEA-LLASS-SYDD-----------TVRIWKD---YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS--DDSTVRV 225 (330)
T ss_dssp SSS-EEEEE-ETTS-----------CEEEEEE---ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE--TTSCEEE
T ss_pred CCC-EEEEE-cCCC-----------eEEEEEC---CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe--CCCeEEE
Confidence 988 55532 2222 2444433 211212 22222333556789987 55566544 3567788
Q ss_pred EEEc
Q 012630 245 WLIS 248 (459)
Q Consensus 245 y~v~ 248 (459)
|.+.
T Consensus 226 w~~~ 229 (330)
T 2hes_X 226 WKYM 229 (330)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8775
No 195
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.86 E-value=0.16 Score=55.02 Aligned_cols=116 Identities=9% Similarity=0.092 Sum_probs=68.7
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC-
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD- 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD- 170 (459)
.+.+..++|||||++|+..+. ...+.|||+.++....+.... .-...+..+.|+|+
T Consensus 9 ~~~V~~l~~s~dg~~latg~~-------------dg~I~vwd~~~~~~~~~~~l~----------~h~~~V~~l~~s~~~ 65 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSS-------------DKTIKIFEVEGETHKLIDTLT----------GHEGPVWRVDWAHPK 65 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEET-------------TTEEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECCTT
T ss_pred cceeEEEEECCCCCeEEEEEC-------------CCcEEEEecCCCCCccceecc----------CCcCceEEEEecCCC
Confidence 455689999999999877752 367899998755444333321 11335678999998
Q ss_pred -CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceE---eccccceeccceeCCC--CcEEEEEeecCCccEEE
Q 012630 171 -RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEI---LHKLDLRFRGVSWCDD--SLALVQETWFKTTQTRT 244 (459)
Q Consensus 171 -g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~---L~~~~~~~~~~~Ws~D--~~al~~~~~~~~~~~~l 244 (459)
+. .|+.. ..| ..|++++. .+++... +.........+.|+++ +..|+... .++..++
T Consensus 66 ~~~-~l~s~-s~D-----------g~I~vwd~---~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs--~dg~I~v 127 (753)
T 3jro_A 66 FGT-ILASC-SYD-----------GKVLIWKE---ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSV 127 (753)
T ss_dssp SCS-EEEEE-ETT-----------SCEEEEEE---ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEE
T ss_pred CCC-EEEEE-eCC-----------CeEEEEEC---CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe--CCCcEEE
Confidence 55 44432 222 24566665 3333222 2223445677899998 76666544 2444555
Q ss_pred EEEc
Q 012630 245 WLIS 248 (459)
Q Consensus 245 y~v~ 248 (459)
|-+.
T Consensus 128 wdl~ 131 (753)
T 3jro_A 128 VEFK 131 (753)
T ss_dssp EECC
T ss_pred EEee
Confidence 5543
No 196
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.84 E-value=2.4 Score=46.17 Aligned_cols=114 Identities=14% Similarity=0.022 Sum_probs=73.2
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceE
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTL 175 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l 175 (459)
.++++.+.|+.|+++-. ....|++++++|...+.|.... -..++.++..|.+. .|
T Consensus 474 ~GLAvD~~~~~LY~tD~------------~~~~I~v~~ldG~~~~~l~~~~------------l~~P~gIaVDp~~g-~L 528 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDS------------VLGTVSVADTKGVKRKTLFREN------------GSKPRAIVVDPVHG-FM 528 (791)
T ss_dssp CEEEEETTTTEEEEEET------------TTTEEEEEETTSSSEEEEEECT------------TCCEEEEEEETTTT-EE
T ss_pred ceeeeeecCCcEEEEec------------CCCeEEEEeCCCCeEEEEEeCC------------CCCcceEEEecCCC-CE
Confidence 46777778888866631 2467899999988776664421 12467888988877 89
Q ss_pred EEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccceeCCC-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 176 YWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSWCDD-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 176 ~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~Ws~D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
||+.. +. ...|+++++ +|...+.|.... ..-.+|+..++ +.+++.+ ....+|+++++++
T Consensus 529 YwtD~---g~-------~~~I~~~~~---dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD----~~~~~I~~~d~dG 589 (791)
T 3m0c_C 529 YWTDW---GT-------PAKIKKGGL---NGVDIYSLVTENIQWPNGITLDLLSGRLYWVD----SKLHSISSIDVNG 589 (791)
T ss_dssp EEEEC---SS-------SCEEEEEET---TSCCEEEEECSSCSCEEEEEEETTTTEEEEEE----TTTTEEEEEETTS
T ss_pred EEecC---CC-------CCeEEEEec---CCCceEEEEeCCCCCceEEEEecCCCeEEEEe----CCCCcEEEEecCC
Confidence 99852 21 246888888 775555565433 22445666654 4444443 2334689998864
No 197
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.81 E-value=0.54 Score=47.20 Aligned_cols=99 Identities=9% Similarity=0.128 Sum_probs=57.5
Q ss_pred CceeeecccCCC-CCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPD-QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPD-G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
...+..++|||+ ++.|+..+. ...+.+||+..+... +... .....+..+.|+||
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~-------------Dg~v~iwD~~~~~~~-~~~~-----------~~~~~v~~v~wspd 203 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLA-------------DGSIAVLQVTETVKV-CATL-----------PSTVAVTSVCWSPK 203 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEET-------------TSCEEEEEESSSEEE-EEEE-----------CGGGCEEEEEECTT
T ss_pred CCceEEEEECCCCCCEEEEEEC-------------CCeEEEEEcCCCcce-eecc-----------CCCCceeEEEEcCC
Confidence 345679999999 666655542 367899998754321 1111 11235678999999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-Eeccc-------cceeccceeCCCCcEEE
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHKL-------DLRFRGVSWCDDSLALV 232 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~~-------~~~~~~~~Ws~D~~al~ 232 (459)
|. .|+.. ..| ..|.+++. .+ +.. .+... ......+.|++++..++
T Consensus 204 g~-~lasg-s~d-----------g~v~iwd~---~~-~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~ 256 (434)
T 2oit_A 204 GK-QLAVG-KQN-----------GTVVQYLP---TL-QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAI 256 (434)
T ss_dssp SS-CEEEE-ETT-----------SCEEEECT---TC-CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEE
T ss_pred CC-EEEEE-cCC-----------CcEEEEcc---CC-cccccccCCcccCCCCceeEEEEEEecCceEEE
Confidence 88 56533 222 24666666 43 332 22211 11456689998875554
No 198
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.79 E-value=2.6 Score=39.27 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=65.6
Q ss_pred ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEecCC
Q 012630 93 AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 93 ~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
..+..+.|||||++|+..+. ...+.+||+. |..+..+... ...+..+.|+||+
T Consensus 56 ~~v~~~~~~~~~~~l~s~s~-------------d~~i~vwd~~~~~~~~~~~~h-------------~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 56 TPVRAGKFIARKNWIIVGSD-------------DFRIRVFNYNTGEKVVDFEAH-------------PDYIRSIAVHPTK 109 (304)
T ss_dssp SCEEEEEEEGGGTEEEEEET-------------TSEEEEEETTTCCEEEEEECC-------------SSCEEEEEECSSS
T ss_pred CcEEEEEEeCCCCEEEEECC-------------CCEEEEEECCCCcEEEEEeCC-------------CCcEEEEEEcCCC
Confidence 34578999999999987753 3678999976 4444444321 2346789999998
Q ss_pred CceEEEEEeccCCccccccCCCCeEEeccCCCCCCC-CceE-eccccceeccceeCC-CCcEEEEEeecCCccEEEEEE
Q 012630 172 PSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE-EPEI-LHKLDLRFRGVSWCD-DSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 172 ~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~-~~~~-L~~~~~~~~~~~Ws~-D~~al~~~~~~~~~~~~ly~v 247 (459)
+ .|+ +...|+ .|.+++. ..+ .... +..-......+.|+| |+..|+... .++..++|-+
T Consensus 110 ~-~l~-sgs~D~-----------~v~lWd~---~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs--~D~~v~iwd~ 170 (304)
T 2ynn_A 110 P-YVL-SGSDDL-----------TVKLWNW---ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC--LDRTVKVWSL 170 (304)
T ss_dssp S-EEE-EEETTS-----------CEEEEEG---GGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE--TTSEEEEEET
T ss_pred C-EEE-EECCCC-----------eEEEEEC---CCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe--CCCeEEEEEC
Confidence 8 554 222222 3445554 221 2222 222233456689998 566666544 2455666655
No 199
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.78 E-value=0.65 Score=45.86 Aligned_cols=128 Identities=9% Similarity=0.175 Sum_probs=73.4
Q ss_pred cceEEEcC-CCcee-ecC-CCceeeecccCCC--------------------CCeEEEEEeccCcccccccCCCCcceEE
Q 012630 75 TQLVLATL-DGTVK-EFG-PPAIYTAVEPSPD--------------------QKYILITSIDRPYSFTVSYTKFPQKVQV 131 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~-~~~~~~~~~~SPD--------------------G~~l~~~~~~~p~s~~v~~~~~~~~~~v 131 (459)
+.+.++++ +++.. .+. ....+..+.|+|+ |++|+..+. ...+.+
T Consensus 256 ~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~-------------D~~i~i 322 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR-------------DKTIKM 322 (410)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET-------------TSEEEE
T ss_pred CeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC-------------CCeEEE
Confidence 34555555 44333 232 3445678999998 445544432 367899
Q ss_pred EecCCc-eeeeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCC-c
Q 012630 132 WTADGK-FVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE-P 209 (459)
Q Consensus 132 ~d~~g~-~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~-~ 209 (459)
||+..+ .+..+... ...++.+.|+|+|+ .|+-. ..| ..|++++. ..++ .
T Consensus 323 wd~~~~~~~~~~~~h-------------~~~v~~v~~~~~g~-~l~s~-s~D-----------~~i~vwd~---~~~~~~ 373 (410)
T 1vyh_C 323 WDVSTGMCLMTLVGH-------------DNWVRGVLFHSGGK-FILSC-ADD-----------KTLRVWDY---KNKRCM 373 (410)
T ss_dssp EETTTTEEEEEEECC-------------SSCEEEEEECSSSS-CEEEE-ETT-----------TEEEEECC---TTSCCC
T ss_pred EECCCCceEEEEECC-------------CCcEEEEEEcCCCC-EEEEE-eCC-----------CeEEEEEC---CCCceE
Confidence 998644 34433221 23467889999998 55522 211 25667776 3223 3
Q ss_pred eEeccccceeccceeCCCCcEEEEEeecCCccEEEEE
Q 012630 210 EILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWL 246 (459)
Q Consensus 210 ~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~ 246 (459)
..+..-......+.|++++..|+.... ++..++|.
T Consensus 374 ~~~~~h~~~v~~l~~~~~~~~l~sgs~--D~~i~vW~ 408 (410)
T 1vyh_C 374 KTLNAHEHFVTSLDFHKTAPYVVTGSV--DQTVKVWE 408 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEEEEET--TSEEEEEC
T ss_pred EEEcCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEe
Confidence 344333445677899999866765542 45566664
No 200
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.75 E-value=3 Score=39.80 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=48.4
Q ss_pred hcceEEEcC-CCcee-ecCCCceeeecccCCC---CCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeecccc
Q 012630 74 TTQLVLATL-DGTVK-EFGPPAIYTAVEPSPD---QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPL 147 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPD---G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~ 147 (459)
.+.|.+.++ +++.. .+........+.++|+ +++|+.... ...+.+||+..+ .+..+..
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~d~~~~~~~~~~~~--- 184 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTR-------------GPKVQLCDLKSGSCSHILQG--- 184 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEES-------------SSSEEEEESSSSCCCEEECC---
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcC-------------CCeEEEEeCCCcceeeeecC---
Confidence 456788888 66544 3444455567788885 447766642 367899998643 3333321
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEE
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVE 179 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~ 179 (459)
-...+..+.|+|+++ .++.+.
T Consensus 185 ----------~~~~v~~~~~~~~~~-~ll~~~ 205 (408)
T 4a11_B 185 ----------HRQEILAVSWSPRYD-YILATA 205 (408)
T ss_dssp ----------CCSCEEEEEECSSCT-TEEEEE
T ss_pred ----------CCCcEEEEEECCCCC-cEEEEE
Confidence 123567899999999 444343
No 201
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.68 E-value=0.32 Score=46.95 Aligned_cols=126 Identities=5% Similarity=0.010 Sum_probs=66.2
Q ss_pred hhcceEEEcCCCceeecC--CCceeeecccCC-CCCeEEEEEeccCcccccccCCCCcceEEEecCCceee-eeeccccc
Q 012630 73 TTTQLVLATLDGTVKEFG--PPAIYTAVEPSP-DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVR-QLCELPLV 148 (459)
Q Consensus 73 ~~sqL~~v~~~G~~~~l~--~~~~~~~~~~SP-DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~-~lt~~p~~ 148 (459)
...+||-++ .++...+. ..+.+..++||| ||++|+..+. ...+.+||+..+... .+......
T Consensus 23 ~~~~v~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~-------------dg~i~iw~~~~~~~~~~~~~~~~~ 88 (408)
T 4a11_B 23 STRRVLGLE-LNKDRDVERIHGGGINTLDIEPVEGRYMLSGGS-------------DGVIVLYDLENSSRQSYYTCKAVC 88 (408)
T ss_dssp HHHHHHTEE-ECTTEEECCCCSSCEEEEEECTTTCCEEEEEET-------------TSCEEEEECCCCSSSSCEEECEEE
T ss_pred Ccceeeccc-cCcceeeeeccCCcEEEEEEecCCCCEEEEEcC-------------CCeEEEEECCCCcccceEeccccc
Confidence 344444444 33333322 355678999999 9999987753 367899998754332 22111000
Q ss_pred ccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCC
Q 012630 149 ENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDD 227 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D 227 (459)
.........-...+..+.|+|++...|+.. .. ...|.+++. ..++.............+.|++.
T Consensus 89 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~-----------d~~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~ 152 (408)
T 4a11_B 89 SIGRDHPDVHRYSVETVQWYPHDTGMFTSS-SF-----------DKTLKVWDT---NTLQTADVFNFEETVYSHHMSPV 152 (408)
T ss_dssp EECTTCTTCCSSCEEEEEECTTCTTCEEEE-ET-----------TSEEEEEET---TTTEEEEEEECSSCEEEEEECSS
T ss_pred cccccccccCCCcEEEEEEccCCCcEEEEE-eC-----------CCeEEEeeC---CCCccceeccCCCceeeeEeecC
Confidence 000000012345678899999555355532 21 124666666 43354444444444555677653
No 202
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.53 E-value=0.65 Score=43.18 Aligned_cols=144 Identities=14% Similarity=0.151 Sum_probs=75.1
Q ss_pred hcceEEEcC-CCc----------eeecC-CCceeeecccCCC--CCeEEEEEeccCcccccccCCCCcceEEEecCCc-e
Q 012630 74 TTQLVLATL-DGT----------VKEFG-PPAIYTAVEPSPD--QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-F 138 (459)
Q Consensus 74 ~sqL~~v~~-~G~----------~~~l~-~~~~~~~~~~SPD--G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~ 138 (459)
.+.|.++++ +++ ...+. ....+..+.|+|| |++|+..+. ...+.+||+..+ .
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-------------dg~v~iwd~~~~~~ 146 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN-------------DGILRLYDALEPSD 146 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-------------TCEEEEEECSSTTC
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC-------------CCcEEEecCCChHH
Confidence 356777777 442 22333 2456689999999 999888753 367899997533 2
Q ss_pred eeeeecccccccccccccccccceeeeEEecC---CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc-
Q 012630 139 VRQLCELPLVENIPIAYNSVREGMRLISWRAD---RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK- 214 (459)
Q Consensus 139 ~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD---g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~- 214 (459)
+..+...................+..+.|+|+ +. .|+.. ..++ ..++.... .+ +...+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~-~~~~----------~~~~~~~~---~~-~~~~~~~~ 210 (351)
T 3f3f_A 147 LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPE-KLAVS-ALEQ----------AIIYQRGK---DG-KLHVAAKL 210 (351)
T ss_dssp TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCC-EEEEE-ETTE----------EEEEEECT---TS-CEEEEEEC
T ss_pred hccccccccccccccccCCcccceeEEEeccCCCCCc-EEEEe-cCCC----------cEEEEccC---CC-ceeeeeec
Confidence 22221100000000111123345678999998 44 44433 2111 11222222 22 3322222
Q ss_pred --ccceeccceeCCCC----cEEEEEeecCCccEEEEEEc
Q 012630 215 --LDLRFRGVSWCDDS----LALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 215 --~~~~~~~~~Ws~D~----~al~~~~~~~~~~~~ly~v~ 248 (459)
....+..+.|++++ ..|+... .++..++|-+.
T Consensus 211 ~~h~~~i~~~~~~p~~~~~~~~l~s~~--~dg~i~iwd~~ 248 (351)
T 3f3f_A 211 PGHKSLIRSISWAPSIGRWYQLIATGC--KDGRIRIFKIT 248 (351)
T ss_dssp CCCCSCEEEEEECCCSSCSSEEEEEEE--TTSCEEEEEEE
T ss_pred CCCCcceeEEEECCCCCCcceEEEEEc--CCCeEEEEeCC
Confidence 23345678999986 5565544 35667777775
No 203
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.50 E-value=0.28 Score=46.31 Aligned_cols=112 Identities=14% Similarity=0.127 Sum_probs=64.2
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce----eeeeecccccccccccccccccceeeeEE
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF----VRQLCELPLVENIPIAYNSVREGMRLISW 167 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~----~~~lt~~p~~~~~P~~~~~~~~~~r~~~W 167 (459)
.+.+..++|||||++|+..+. ...+.||++..+. .+.+.. ....+..+.|
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~-------------d~~v~iw~~~~~~~~~~~~~~~~-------------~~~~v~~~~~ 64 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSW-------------DGSLTVYKFDIQAKNVDLLQSLR-------------YKHPLLCCNF 64 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEET-------------TSEEEEEEEETTTTEEEEEEEEE-------------CSSCEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEcC-------------CCeEEEEEeCCCCccccceeeee-------------cCCceEEEEE
Confidence 345689999999999987753 3678999976443 222221 1235678999
Q ss_pred ecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc--ccceeccceeCCCCcEEEEEeecCCccEEEE
Q 012630 168 RADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK--LDLRFRGVSWCDDSLALVQETWFKTTQTRTW 245 (459)
Q Consensus 168 spDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~--~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly 245 (459)
+||+.. ++++...|+ .|++++. --.+ +...+.. .......+.|++ +..|+.... ++..++|
T Consensus 65 ~~~~~~-~l~~~~~dg-----------~i~~wd~-~~~~-~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~--d~~i~iw 127 (342)
T 1yfq_A 65 IDNTDL-QIYVGTVQG-----------EILKVDL-IGSP-SFQALTNNEANLGICRICKYG-DDKLIAASW--DGLIEVI 127 (342)
T ss_dssp EESSSE-EEEEEETTS-----------CEEEECS-SSSS-SEEECBSCCCCSCEEEEEEET-TTEEEEEET--TSEEEEE
T ss_pred CCCCCc-EEEEEcCCC-----------eEEEEEe-ccCC-ceEeccccCCCCceEEEEeCC-CCEEEEEcC--CCeEEEE
Confidence 999661 233322221 3444432 0023 5555554 444567788988 655554432 3334444
Q ss_pred E
Q 012630 246 L 246 (459)
Q Consensus 246 ~ 246 (459)
-
T Consensus 128 d 128 (342)
T 1yfq_A 128 D 128 (342)
T ss_dssp C
T ss_pred c
Confidence 3
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.39 E-value=1.1 Score=44.57 Aligned_cols=138 Identities=9% Similarity=0.071 Sum_probs=79.0
Q ss_pred ceEEEcC-CCc-eeec----C-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccc
Q 012630 76 QLVLATL-DGT-VKEF----G-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLV 148 (459)
Q Consensus 76 qL~~v~~-~G~-~~~l----~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~ 148 (459)
.|++++. ++. .+.+ . ......++.++|++.+|++. . ....++++|.+++....+...+..
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d------------~~~~I~~~d~~~~~~~~~~~~~~~ 261 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV-D------------SNKNFGRFNVKTQEVTLIKQLELS 261 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE-C------------TTCEEEEEETTTCCEEEEEECCCC
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE-E------------CCCcEEEEECCCCCEEEEeccccc
Confidence 6777777 343 2344 2 23334689999977777774 2 135789999887665555332111
Q ss_pred cccccccccccccee-eeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-----------
Q 012630 149 ENIPIAYNSVREGMR-LISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD----------- 216 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r-~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~----------- 216 (459)
.. ....|+ .+.|+|++. .||++.. ....|+.++. +| +...+....
T Consensus 262 g~-------~~~~P~~~ia~~p~~g-~lyv~d~-----------~~~~I~~~~~---~g-~~~~~~g~~~~~g~~dg~~~ 318 (409)
T 3hrp_A 262 GS-------LGTNPGPYLIYYFVDS-NFYMSDQ-----------NLSSVYKITP---DG-ECEWFCGSATQKTVQDGLRE 318 (409)
T ss_dssp SC-------CCCSSCCEEEEETTTT-EEEEEET-----------TTTEEEEECT---TC-CEEEEEECTTCCSCBCEEGG
T ss_pred CC-------CCCCccccEEEeCCCC-EEEEEeC-----------CCCEEEEEec---CC-CEEEEEeCCCCCCcCCCccc
Confidence 10 111234 899999776 6776642 1346888877 65 444333211
Q ss_pred ----ceeccceeCCCCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 217 ----LRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 217 ----~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
..-.++++++||..++.+.+ .+.+|+++++.++
T Consensus 319 ~~~~~~P~gia~d~dG~lyvad~~---~~~~I~~~~~~~G 355 (409)
T 3hrp_A 319 EALFAQPNGMTVDEDGNFYIVDGF---KGYCLRKLDILDG 355 (409)
T ss_dssp GCBCSSEEEEEECTTCCEEEEETT---TTCEEEEEETTTT
T ss_pred ccEeCCCeEEEEeCCCCEEEEeCC---CCCEEEEEECCCC
Confidence 11245778888875555431 3346888885443
No 205
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.98 E-value=3.3 Score=38.46 Aligned_cols=104 Identities=12% Similarity=0.050 Sum_probs=58.6
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceee-eeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVR-QLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~-~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
...+..+.|++++...++.+.. ....+.+||+..+... .+.. -...+..+.|+||
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~-----------~d~~i~i~d~~~~~~~~~~~~-------------h~~~v~~~~~s~~ 226 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCG-----------WDKLVKVWNLANCKLKTNHIG-------------HTGYLNTVTVSPD 226 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEE-----------TTSCEEEEETTTTEEEEEECC-------------CSSCEEEEEECTT
T ss_pred cCcccceEEccCCCCcEEEEEc-----------CCCEEEEEECCCCceeeEecC-------------CCCcEEEEEECCC
Confidence 3455678899988665444321 2356789998754432 2211 1234568899999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEEEEe
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQET 235 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~~~~ 235 (459)
++ .|+-. ..| ..|.+++. ..++.............+.|++++..+....
T Consensus 227 ~~-~l~s~-s~D-----------g~i~iwd~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 275 (340)
T 4aow_A 227 GS-LCASG-GKD-----------GQAMLWDL---NEGKHLYTLDGGDIINALCFSPNRYWLCAAT 275 (340)
T ss_dssp SS-EEEEE-ETT-----------CEEEEEET---TTTEEEEEEECSSCEEEEEECSSSSEEEEEE
T ss_pred CC-EEEEE-eCC-----------CeEEEEEe---ccCceeeeecCCceEEeeecCCCCceeeccC
Confidence 98 55522 221 24666666 3223332223333456678999886665443
No 206
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.93 E-value=0.65 Score=43.91 Aligned_cols=101 Identities=19% Similarity=0.338 Sum_probs=52.7
Q ss_pred CcceEEEecCCc-eeeeeecccccccccccccccccceeeeEEecCCC---ceEEEEEeccCCccccccCCCCeEEeccC
Q 012630 126 PQKVQVWTADGK-FVRQLCELPLVENIPIAYNSVREGMRLISWRADRP---STLYWVETQDGGAAKVEVSPRDIIYTQPA 201 (459)
Q Consensus 126 ~~~~~v~d~~g~-~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~---~~l~~~~~~d~g~~~~~~~~~~~l~~~~~ 201 (459)
...+.+||+.+. ..+.+..+. .-...++.+.|+|++. ..|+ ....|+ .|.+++.
T Consensus 188 D~~v~lWd~~~~~~~~~~~~l~----------~h~~~V~~v~~sp~~~~~~~~la-s~s~D~-----------~v~iw~~ 245 (316)
T 3bg1_A 188 DNLIKLWKEEEDGQWKEEQKLE----------AHSDWVRDVAWAPSIGLPTSTIA-SCSQDG-----------RVFIWTC 245 (316)
T ss_dssp TSBCCEEEECTTSCEEEEECCB----------CCSSCEEEEECCCCSSCSCCEEE-EEETTC-----------EEEEEEC
T ss_pred CCeEEEEEeCCCCccceeeecc----------cCCCceEEEEecCCCCCCCceEE-EEcCCC-----------eEEEEEc
Confidence 466788887633 222222211 1123567899999972 2444 222222 3445544
Q ss_pred CCCCCCC--ceEeccccceeccceeCCCCcEEEEEeecCCccEEEEEEcCC
Q 012630 202 EPVEGEE--PEILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 202 ~pf~g~~--~~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~ 250 (459)
.....++ .+.+.........++|+||+..|+... .++..++|..+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~--~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSG--GDNKVTLWKESVD 294 (316)
T ss_dssp SSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEE--SSSCEEEEEECTT
T ss_pred cCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEc--CCCeEEEEEECCC
Confidence 0001011 223332334466789999986666544 2567888987654
No 207
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.87 E-value=0.57 Score=50.54 Aligned_cols=117 Identities=15% Similarity=0.237 Sum_probs=68.5
Q ss_pred CceeeecccCCC--CCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEec
Q 012630 92 PAIYTAVEPSPD--QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRA 169 (459)
Q Consensus 92 ~~~~~~~~~SPD--G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~Wsp 169 (459)
.+.+..++|||+ |++|+..+. ...+.+||+.++....+.... .-...+..+.|+|
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~-------------Dg~I~vwd~~~~~~~~~~~~~----------~h~~~V~~v~~sp 109 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSY-------------DGKVLIWKEENGRWSQIAVHA----------VHSASVNSVQWAP 109 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEET-------------TSCEEEEEEETTEEEEEEEEC----------CCSSCEEEEEECC
T ss_pred cCceEEEEecCCCCCCEEEEEeC-------------CCeEEEEECCCCccccccccc----------CCCCCeEEEEECC
Confidence 445689999999 998877763 367899998766533333221 1133567899999
Q ss_pred C--CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCC---CceEeccccceeccceeCC-------------CCcEE
Q 012630 170 D--RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE---EPEILHKLDLRFRGVSWCD-------------DSLAL 231 (459)
Q Consensus 170 D--g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~---~~~~L~~~~~~~~~~~Ws~-------------D~~al 231 (459)
+ +. .++.. ..| ..|.+++. ..+ ....+.........+.|++ |+..|
T Consensus 110 ~~~~~-~l~sg-s~d-----------g~I~vwdl---~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l 173 (753)
T 3jro_A 110 HEYGP-LLLVA-SSD-----------GKVSVVEF---KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (753)
T ss_dssp GGGCS-EEEEE-ETT-----------SEEEEEEC---CSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCE
T ss_pred CCCCC-EEEEE-eCC-----------CcEEEEEe---ecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEE
Confidence 9 66 55533 221 24555555 221 1222323344566788888 45555
Q ss_pred EEEeecCCccEEEEEEcC
Q 012630 232 VQETWFKTTQTRTWLISP 249 (459)
Q Consensus 232 ~~~~~~~~~~~~ly~v~~ 249 (459)
+... .++..++|-+..
T Consensus 174 ~sgs--~dg~I~iwd~~~ 189 (753)
T 3jro_A 174 VTGG--ADNLVKIWKYNS 189 (753)
T ss_dssp EEEE--TTSCEEEEEEET
T ss_pred EEEE--CCCeEEEEeccC
Confidence 5443 245566776643
No 208
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.87 E-value=1.8 Score=39.97 Aligned_cols=117 Identities=13% Similarity=0.112 Sum_probs=69.3
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
.+.+....++|++..++++... .....+.+||............ ...+....|+|++
T Consensus 196 ~~~v~~~~~~~~~~~~~~~~~~----------~~~~~i~lwd~~~~~~~~~~~~-------------~~~v~~~~~~~~~ 252 (318)
T 4ggc_A 196 QGAVKAVAWCPWQSNVLATGGG----------TSDRHIRIWNVCSGACLSAVDA-------------HSQVCSILWSPHY 252 (318)
T ss_dssp CSCEEEEEECTTSTTEEEEEEC----------TTTCEEEEEETTTCCEEEEEEC-------------SSCEEEEEEETTT
T ss_pred CCceEEEEecCCCCcEEEEEec----------CCCCEEEEEecccccccccccc-------------eeeeeeeeecccc
Confidence 3445688899999888776432 1235678888765443322221 2345678999999
Q ss_pred CceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-EeccccceeccceeCCCCcEEEEEeecCCccEEEEEE
Q 012630 172 PSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 172 ~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v 247 (459)
. .++.+... ....|++++. ..++.. .|..-...+..++|++|+..|++.. .++..++|.+
T Consensus 253 ~-~~~~~sg~----------~d~~i~iwd~---~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s--~D~~v~iWd~ 313 (318)
T 4ggc_A 253 K-ELISGHGF----------AQNQLVIWKY---PTMAKVAELKGHTSRVLSLTMSPDGATVASAA--ADETLRLWRC 313 (318)
T ss_dssp T-EEEEEECT----------TTCCEEEEET---TTCCEEEEECCCSSCEEEEEECTTSSCEEEEE--TTTEEEEECC
T ss_pred c-ceEEEEEc----------CCCEEEEEEC---CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe--cCCeEEEEEC
Confidence 8 55433211 1234666766 322333 3322234467789999997777655 3566778865
No 209
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=93.82 E-value=0.078 Score=50.03 Aligned_cols=42 Identities=10% Similarity=0.051 Sum_probs=34.5
Q ss_pred cCCceEEEEEECCC-CcEEEEEEEccCCCCCCCCCCceEEEEEcC
Q 012630 396 STLQKELIKYQRKD-GVQLTAKLYLPTGYDPSKDGHLLCLFWAYP 439 (459)
Q Consensus 396 ~~~~~E~i~yks~D-G~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp 439 (459)
.+...|.+++++.+ |.++..++|+|++|++++ +||+|++...
T Consensus 9 ~~~~~~~~~~~S~~~~~~~~~~vylP~~y~~~~--~yPvly~l~G 51 (278)
T 2gzs_A 9 VFYHFSATSFDSVDGTRHYRVWTAVPNTTAPAS--GYPILYMLDG 51 (278)
T ss_dssp SSEEEEEEEEECTTSSCEEEEEEEEESSCCCTT--CEEEEEESSH
T ss_pred CCCceEEEEEEcCCCCceEEEEEECCCCCCCCC--CCCEEEEeeC
Confidence 45678899999987 789999999999998765 8998765443
No 210
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=93.82 E-value=1.3 Score=44.91 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=53.2
Q ss_pred hhcceEEEcC-CCcee---ecCCCc-eeeec--ccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceee---ee
Q 012630 73 TTTQLVLATL-DGTVK---EFGPPA-IYTAV--EPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVR---QL 142 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~---~l~~~~-~~~~~--~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~---~l 142 (459)
...+|.++|+ +++.. .++..+ ....+ .++|||+++.++..- ........++++..+++... .|
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~-------~~~~Lss~V~v~~~d~g~~~~~~vI 298 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVV-------SLKDLSSSIWLWFYEDGKWNAEKVI 298 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEE-------ETTTCCEEEEEEEEETTEEEEEEEE
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEee-------eccCCCceEEEEEecCCceeEEEEE
Confidence 5688999999 66544 233222 22333 559999988666420 00112355666543333211 11
Q ss_pred --ecccccccc---cccccccccceeeeEEecCCCceEEEE
Q 012630 143 --CELPLVENI---PIAYNSVREGMRLISWRADRPSTLYWV 178 (459)
Q Consensus 143 --t~~p~~~~~---P~~~~~~~~~~r~~~WspDg~~~l~~~ 178 (459)
...+..... |.+|.++...+..+..||||+ .||..
T Consensus 299 di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr-fLYVS 338 (462)
T 2ece_A 299 EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDK-FLYLS 338 (462)
T ss_dssp EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSC-EEEEE
T ss_pred eCCCccccccccccccccccCCCceeEEEECCCCC-EEEEE
Confidence 111111122 245555556788999999999 77754
No 211
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.81 E-value=1.6 Score=41.42 Aligned_cols=144 Identities=8% Similarity=-0.035 Sum_probs=80.4
Q ss_pred hhcceEEEcC-CCceee-cCCC--ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc--eeeeeeccc
Q 012630 73 TTTQLVLATL-DGTVKE-FGPP--AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK--FVRQLCELP 146 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~-l~~~--~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~--~~~~lt~~p 146 (459)
..+.|+++|. +|+... ++.. ....++.++|||+ |+++.. ....|.+||.+|. .+..+....
T Consensus 67 ~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d~------------~~~~v~~~~~~g~~~~~~~~~~~~ 133 (329)
T 3fvz_A 67 EEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTDV------------ALHQVFKLDPHSKEGPLLILGRSM 133 (329)
T ss_dssp CSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEET------------TTTEEEEECTTCSSCCSEEESBTT
T ss_pred cCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEEC------------CCCEEEEEeCCCCeEEEEEecccC
Confidence 3568999998 687654 3322 2346899999999 545431 2367889998887 444443211
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc-cc-------c-
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK-LD-------L- 217 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~-~~-------~- 217 (459)
..... ...-..+..+.++|+.. .|+++.. .+ ...|+.++. +| +...... .. .
T Consensus 134 ~~g~~----~~~~~~P~~ia~~~~~g-~lyv~d~--~~--------~~~I~~~~~---~g-~~~~~~~~~g~~~~~~~~~ 194 (329)
T 3fvz_A 134 QPGSD----QNHFCQPTDVAVEPSTG-AVFVSDG--YC--------NSRIVQFSP---SG-KFVTQWGEESSGSSPRPGQ 194 (329)
T ss_dssp BCCCS----TTCCSSEEEEEECTTTC-CEEEEEC--SS--------CCEEEEECT---TS-CEEEEECEECCSSSCCTTE
T ss_pred CCCCC----ccccCCCcEEEEeCCCC-eEEEEeC--CC--------CCeEEEEcC---CC-CEEEEeccCCCCCCCCCcc
Confidence 00000 01123578899999433 4554431 01 235777766 65 3332221 11 1
Q ss_pred --eeccceeCCC-CcEEEEEeecCCccEEEEEEcCCCC
Q 012630 218 --RFRGVSWCDD-SLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 218 --~~~~~~Ws~D-~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
.-.++++++| +..++.+.. ..+|.+++++++
T Consensus 195 ~~~p~gia~d~~~g~l~v~d~~----~~~I~~~~~~~G 228 (329)
T 3fvz_A 195 FSVPHSLALVPHLDQLCVADRE----NGRIQCFKTDTK 228 (329)
T ss_dssp ESCEEEEEEETTTTEEEEEETT----TTEEEEEETTTC
T ss_pred cCCCcEEEEECCCCEEEEEECC----CCEEEEEECCCC
Confidence 1345778887 677776542 235777777643
No 212
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.79 E-value=5.7 Score=39.19 Aligned_cols=114 Identities=15% Similarity=0.027 Sum_probs=72.5
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceE
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTL 175 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l 175 (459)
.++++.+.++.|.++-. ....|++++++|+..+.+.... -..++.+.-.|.+. .|
T Consensus 162 ~glavD~~~~~lY~~d~------------~~~~I~~~~~~g~~~~~l~~~~------------~~~P~~iavdp~~g-~l 216 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDS------------VLGTVSVADTKGVKRKTLFREN------------GSKPRAIVVDPVHG-FM 216 (400)
T ss_dssp EEEEEETTTTEEEEEET------------TTTEEEEECTTTCSEEEEEECS------------SCCEEEEEEETTTT-EE
T ss_pred ccEEEEecCCceEEEEC------------CCCeEEEEeCCCCceEEEEeCC------------CCCcceEEEecccC-eE
Confidence 46667777777766631 2367888898887766554321 12467888888877 89
Q ss_pred EEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccceeCCCC-cEEEEEeecCCccEEEEEEcCCC
Q 012630 176 YWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSWCDDS-LALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 176 ~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~Ws~D~-~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
||+.. +. ...|+.++. +|...+.+.... ..-.++++++++ .+++.+. ...+|++++.++
T Consensus 217 y~td~---~~-------~~~I~~~~~---dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~----~~~~I~~~d~dG 277 (400)
T 3p5b_L 217 YWTDW---GT-------PAKIKKGGL---NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS----KLHSISSIDVNG 277 (400)
T ss_dssp EEEEC---SS-------SCCEEEEET---TSCSCEEEECSSCSCEEEEEEETTTTEEEEEET----TTTEEEEEETTS
T ss_pred EEEeC---CC-------CCEEEEEeC---CCCccEEEEECCCCceEEEEEEeCCCEEEEEEC----CCCEEEEEeCCC
Confidence 98853 11 246888888 775555665433 234668888764 4444432 334689999874
No 213
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.61 E-value=1.4 Score=42.68 Aligned_cols=131 Identities=13% Similarity=0.124 Sum_probs=69.9
Q ss_pred cceEEEcC-CCceee-cC------CCceeeecccCC-CCCeEEEEEeccCcccccccCCCCcceEEEecC-C-ceeeeee
Q 012630 75 TQLVLATL-DGTVKE-FG------PPAIYTAVEPSP-DQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-G-KFVRQLC 143 (459)
Q Consensus 75 sqL~~v~~-~G~~~~-l~------~~~~~~~~~~SP-DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g-~~~~~lt 143 (459)
+.|.+.|+ +|+... +. ....+..+.|+| |+++|+..+. ...+.+||+. + ..++.+.
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~-------------D~~v~~wd~~~~~~~~~~~~ 246 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC-------------DTTVRLWDLRITSRAVRTYH 246 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET-------------TSCEEEEETTTTCCCCEEEC
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC-------------CCeEEEEECCCCCcceEEEC
Confidence 45667777 554332 21 233456788876 7887766542 3678999975 3 2222221
Q ss_pred cccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-------
Q 012630 144 ELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD------- 216 (459)
Q Consensus 144 ~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~------- 216 (459)
. -...+..+.|+|||. .|+-. ..|+ .|.+++. ..++........
T Consensus 247 ~-------------h~~~v~~v~~~p~~~-~l~s~-s~D~-----------~i~lwd~---~~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 247 G-------------HEGDINSVKFFPDGQ-RFGTG-SDDG-----------TCRLFDM---RTGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp C-------------CSSCCCEEEECTTSS-EEEEE-CSSS-----------CEEEEET---TTTEEEEEECCCCSSSCCS
T ss_pred C-------------cCCCeEEEEEecCCC-eEEEE-cCCC-----------eEEEEEC---CCCcEEEEecccccccccc
Confidence 1 123456899999998 55422 2222 3555555 222333222111
Q ss_pred -ceeccceeCCCCcEEEEEeecCCccEEEEEEcCCC
Q 012630 217 -LRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 217 -~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
.....++|+++|..|+... .++..++| +..+
T Consensus 298 ~~~v~~~~~s~~g~~l~~g~--~dg~i~vw--d~~~ 329 (380)
T 3iz6_a 298 LPIVTSVAFSISGRLLFAGY--SNGDCYVW--DTLL 329 (380)
T ss_dssp SCSCSEEEECSSSSEEEEEC--TTSCEEEE--ETTT
T ss_pred cCceEEEEECCCCCEEEEEE--CCCCEEEE--ECCC
Confidence 1134578999987766543 23444444 5443
No 214
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.56 E-value=2 Score=39.40 Aligned_cols=132 Identities=13% Similarity=0.172 Sum_probs=72.7
Q ss_pred cceEEEcCCCc-eeecCC---CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 75 TQLVLATLDGT-VKEFGP---PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~~G~-~~~l~~---~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
..|++++.+|+ .+.+.. ......+.++|||+ |+++. . ....+++||.+|+.+..+...
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~-~-----------~~~~i~~~~~~g~~~~~~~~~----- 203 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISD-N-----------RAHCVKVFNYEGQYLRQIGGE----- 203 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEEE-G-----------GGTEEEEEETTCCEEEEESCT-----
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEEE-C-----------CCCEEEEEcCCCCEEEEEccC-----
Confidence 45666666443 333432 12346889999997 44442 1 236789999888766655321
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc--ceeccceeCCCC
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD--LRFRGVSWCDDS 228 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~--~~~~~~~Ws~D~ 228 (459)
.....+..+..++||. |+.+.. ++ ...|.+++. +|...+.+.... ....++++++||
T Consensus 204 ------g~~~~p~~i~~d~~G~--l~v~~~---~~-------~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 204 ------GITNYPIGVGINSNGE--ILIADN---HN-------NFNLTIFTQ---DGQLISALESKVKHAQCFDVALMDDG 262 (286)
T ss_dssp ------TTSCSEEEEEECTTCC--EEEEEC---SS-------SCEEEEECT---TSCEEEEEEESSCCSCEEEEEEETTT
T ss_pred ------CccCCCcEEEECCCCC--EEEEeC---CC-------CEEEEEECC---CCCEEEEEcccCCCCcceeEEECCCC
Confidence 0013566889999986 333321 11 125777777 652233332211 123457888998
Q ss_pred cEEEEEeecCCccEEEEEEc
Q 012630 229 LALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v~ 248 (459)
..++.. . +....+|.+.
T Consensus 263 ~l~vs~--~-~~~v~v~~~~ 279 (286)
T 1q7f_A 263 SVVLAS--K-DYRLYIYRYV 279 (286)
T ss_dssp EEEEEE--T-TTEEEEEECS
T ss_pred cEEEEC--C-CCeEEEEEcc
Confidence 766663 2 3445566553
No 215
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.51 E-value=1.4 Score=41.59 Aligned_cols=120 Identities=14% Similarity=0.119 Sum_probs=68.1
Q ss_pred CceeeecccCCC---CCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEE
Q 012630 92 PAIYTAVEPSPD---QKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISW 167 (459)
Q Consensus 92 ~~~~~~~~~SPD---G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~W 167 (459)
...+..++|||+ |..+++.+.. ...+.+||+. ++.++.+...... .....+..+.|
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~------------~~~v~vw~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~ 77 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVG------------SNRVTLYECHSQGEIRLLQSYVDA--------DADENFYTCAW 77 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEE------------TTEEEEEEECGGGCEEEEEEEECS--------CTTCCEEEEEE
T ss_pred CCceEEEEEecccCCCCceEEEECC------------CCEEEEEEcCCCcEEEeeeecccc--------CCCCcEEEEEe
Confidence 445678999985 6655555422 2468999977 5555555432110 11245678999
Q ss_pred ecCCC--ceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceE-eccccceeccceeCC-CCcEEEEEeecCCccEE
Q 012630 168 RADRP--STLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEI-LHKLDLRFRGVSWCD-DSLALVQETWFKTTQTR 243 (459)
Q Consensus 168 spDg~--~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~-L~~~~~~~~~~~Ws~-D~~al~~~~~~~~~~~~ 243 (459)
+|++. ..++.+... ...|.+++. ..++... +.........+.|++ ++..|+.... ++..+
T Consensus 78 ~~~~~~~~~~l~~~~~-----------dg~i~v~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~--dg~i~ 141 (366)
T 3k26_A 78 TYDSNTSHPLLAVAGS-----------RGIIRIINP---ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK--DHALR 141 (366)
T ss_dssp EECTTTCCEEEEEEET-----------TCEEEEECT---TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET--TSCEE
T ss_pred ccCCCCCCCEEEEecC-----------CCEEEEEEc---hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC--CCeEE
Confidence 99954 123333222 235777776 3224333 333445577789999 7766665442 34455
Q ss_pred EEEE
Q 012630 244 TWLI 247 (459)
Q Consensus 244 ly~v 247 (459)
+|-+
T Consensus 142 iwd~ 145 (366)
T 3k26_A 142 LWNI 145 (366)
T ss_dssp EEET
T ss_pred EEEe
Confidence 5543
No 216
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.43 E-value=9 Score=40.37 Aligned_cols=139 Identities=14% Similarity=0.126 Sum_probs=84.3
Q ss_pred HhhcceEEEcC-CCcee---ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccc
Q 012630 72 YTTTQLVLATL-DGTVK---EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPL 147 (459)
Q Consensus 72 ~~~sqL~~v~~-~G~~~---~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~ 147 (459)
-.+.+|.++++ +.... ++..-.....+.++|++.+|.++-. ....|+.++++|..+..+....+
T Consensus 12 s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~------------~~~~I~r~~~~g~~~~~v~~~g~ 79 (628)
T 4a0p_A 12 SRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI------------SLKTISRAFMNGSALEHVVEFGL 79 (628)
T ss_dssp EETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET------------TTTEEEEEETTSCSCEEEECSSC
T ss_pred EeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC------------CCCeEEEEECCCCCcEEEEeCCC
Confidence 35678999999 33332 2333234468999999999877742 23678888888876655544221
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccceeCC
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSWCD 226 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~Ws~ 226 (459)
..+.+++-.+.+. .|||+.. ....|.+++. +|+..+.|.... ..-.+++..|
T Consensus 80 ------------~~P~GlAvD~~~~-~LY~tD~-----------~~~~I~v~~~---dG~~~~~l~~~~l~~P~~iavdp 132 (628)
T 4a0p_A 80 ------------DYPEGMAVDWLGK-NLYWADT-----------GTNRIEVSKL---DGQHRQVLVWKDLDSPRALALDP 132 (628)
T ss_dssp ------------SCCCEEEEETTTT-EEEEEET-----------TTTEEEEEET---TSTTCEEEECSSCCCEEEEEEET
T ss_pred ------------CCcceEEEEeCCC-EEEEEEC-----------CCCEEEEEec---CCCcEEEEEeCCCCCcccEEEcc
Confidence 1233455555555 8998752 1357888888 775555555322 2234567776
Q ss_pred C-CcEEEEEeecCCccEEEEEEcCCCC
Q 012630 227 D-SLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 227 D-~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
. |..++.+ | ....+|+++++++.
T Consensus 133 ~~G~lY~tD-~--g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 133 AEGFMYWTE-W--GGKPKIDRAAMDGS 156 (628)
T ss_dssp TTTEEEEEE-C--SSSCEEEEEETTSC
T ss_pred CCCeEEEeC-C--CCCCEEEEEeCCCC
Confidence 4 5554443 3 23568999998753
No 217
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.35 E-value=0.74 Score=43.47 Aligned_cols=76 Identities=13% Similarity=0.192 Sum_probs=50.3
Q ss_pred hcceEEEcC-C-Ccee--ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccc
Q 012630 74 TTQLVLATL-D-GTVK--EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLV 148 (459)
Q Consensus 74 ~sqL~~v~~-~-G~~~--~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~ 148 (459)
.+.|.++++ + +... .+. ....+..+.|||||++|+..+. ...+.+||+..+....+...
T Consensus 63 dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------------dg~v~iwd~~~~~~~~~~~~--- 126 (368)
T 3mmy_A 63 ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC-------------DKTAKMWDLSSNQAIQIAQH--- 126 (368)
T ss_dssp TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTTEEEEEEEC---
T ss_pred CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC-------------CCcEEEEEcCCCCceeeccc---
Confidence 356667776 3 5432 332 3556789999999999987752 36789999887665544321
Q ss_pred ccccccccccccceeeeEE--ecCCCceEE
Q 012630 149 ENIPIAYNSVREGMRLISW--RADRPSTLY 176 (459)
Q Consensus 149 ~~~P~~~~~~~~~~r~~~W--spDg~~~l~ 176 (459)
...+..+.| +|++. .|+
T Consensus 127 ----------~~~v~~~~~~~~~~~~-~l~ 145 (368)
T 3mmy_A 127 ----------DAPVKTIHWIKAPNYS-CVM 145 (368)
T ss_dssp ----------SSCEEEEEEEECSSCE-EEE
T ss_pred ----------cCceEEEEEEeCCCCC-EEE
Confidence 235678899 77766 444
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=93.19 E-value=1.1 Score=43.15 Aligned_cols=154 Identities=14% Similarity=0.113 Sum_probs=78.8
Q ss_pred hcceEEEcC-CCc-eeecCCC-------ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeee
Q 012630 74 TTQLVLATL-DGT-VKEFGPP-------AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLC 143 (459)
Q Consensus 74 ~sqL~~v~~-~G~-~~~l~~~-------~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt 143 (459)
..+|+++|+ +|+ .+.+.-+ ....++.++|++.+++++-... .....++++|.+++.. +.+.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~---------~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP---------DDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS---------GGGCEEEEEETTTCCEEEECT
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc---------CCCCeEEEEECCCCCEEEEec
Confidence 468888998 787 3333211 1236788999877776653100 0235688999874444 3332
Q ss_pred cccc--cccccccccc--------------cccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCC-CC
Q 012630 144 ELPL--VENIPIAYNS--------------VREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPV-EG 206 (459)
Q Consensus 144 ~~p~--~~~~P~~~~~--------------~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf-~g 206 (459)
..+. .+......+. ...++..+.|+|||+ +||+.... ...||.++.... .+
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~-~ly~~~~~-----------~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 163 GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE-WLYLSPMH-----------STSMYRIKSADLSNL 230 (343)
T ss_dssp TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSC-EEEEEESS-----------CSEEEEEEHHHHTCT
T ss_pred CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCC-EEEEEeCC-----------CCeEEEEEHHHhcCC
Confidence 2111 0000000011 123567899999998 88876431 225776653000 11
Q ss_pred --CCce-----EeccccceeccceeCCCCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 207 --EEPE-----ILHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 207 --~~~~-----~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
++.+ ..........++++++||..++.... ...|++++++++
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~----~~~V~~~d~~~G 279 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLA----HSAIGVITSADR 279 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGG----GTEEEEEETTTT
T ss_pred CCChhhhhcceEecccCCCCceEEECCCCCEEEEccC----CCeEEEEECCCC
Confidence 0110 01111112345788888876666432 235888887433
No 219
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.02 E-value=10 Score=39.90 Aligned_cols=137 Identities=13% Similarity=0.064 Sum_probs=85.0
Q ss_pred hcceEEEcCCC-ceeecCCCc--eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 74 TTQLVLATLDG-TVKEFGPPA--IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~~G-~~~~l~~~~--~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
...|++++++| ..+.+...+ ...++++.+.++.|.++-. ....|++.+++|...+.|....
T Consensus 58 ~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~------------~~~~I~v~~~dG~~~~~l~~~~---- 121 (628)
T 4a0p_A 58 LKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT------------GTNRIEVSKLDGQHRQVLVWKD---- 121 (628)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET------------TTTEEEEEETTSTTCEEEECSS----
T ss_pred CCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC------------CCCEEEEEecCCCcEEEEEeCC----
Confidence 45677787744 344333322 2346777777888866631 2467899999987665554321
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCC-c
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDS-L 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~-~ 229 (459)
-..|+.+.-.|... .|||+.. +. ...|+.++. +|...+.|...-..-.+++.++++ .
T Consensus 122 --------l~~P~~iavdp~~G-~lY~tD~---g~-------~~~I~r~~~---dG~~~~~l~~~~~~P~GlalD~~~~~ 179 (628)
T 4a0p_A 122 --------LDSPRALALDPAEG-FMYWTEW---GG-------KPKIDRAAM---DGSERTTLVPNVGRANGLTIDYAKRR 179 (628)
T ss_dssp --------CCCEEEEEEETTTT-EEEEEEC---SS-------SCEEEEEET---TSCSCEEEECSCSSEEEEEEETTTTE
T ss_pred --------CCCcccEEEccCCC-eEEEeCC---CC-------CCEEEEEeC---CCCceEEEECCCCCcceEEEccccCE
Confidence 13567889998777 8998742 21 347888888 876666665433334567777764 4
Q ss_pred EEEEEeecCCccEEEEEEcCCCC
Q 012630 230 ALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
.++.+. ....|+++++++.
T Consensus 180 LY~aD~----~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 180 LYWTDL----DTNLIESSNMLGL 198 (628)
T ss_dssp EEEEET----TTTEEEEEETTSC
T ss_pred EEEEEC----CCCEEEEEcCCCC
Confidence 444432 3346889998753
No 220
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.01 E-value=0.94 Score=42.49 Aligned_cols=135 Identities=8% Similarity=0.000 Sum_probs=76.3
Q ss_pred hhcceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc-eeeeeecccccc
Q 012630 73 TTTQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK-FVRQLCELPLVE 149 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~-~~~~lt~~p~~~ 149 (459)
....++++|. ++++. .+..+ .-....++|||++|.++ + ....+.++|.++. .++.|.-. ..
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs-~------------gs~~l~viD~~t~~v~~~I~Vg--~~ 147 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGS-D------------GTSILYEIDPHTFKLIKKHNVK--YN 147 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEE-C------------SSSEEEEECTTTCCEEEEEECE--ET
T ss_pred cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEE-C------------CCCeEEEEECCCCcEEEEEEEC--CC
Confidence 3467888887 66433 44333 11346688999998654 2 2367899997753 34433211 01
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-------------
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD------------- 216 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~------------- 216 (459)
..|+ ..+..+.|. || .|| +.. ...+.|.++|. ..++........
T Consensus 148 ~~p~------~~~nele~~-dg--~ly-vn~----------~~~~~V~vID~---~tg~V~~~I~~~g~~~~~~~~~~~~ 204 (266)
T 2iwa_A 148 GHRV------IRLNELEYI-NG--EVW-ANI----------WQTDCIARISA---KDGTLLGWILLPNLRKKLIDEGFRD 204 (266)
T ss_dssp TEEC------CCEEEEEEE-TT--EEE-EEE----------TTSSEEEEEET---TTCCEEEEEECHHHHHHHHHTTCTT
T ss_pred Cccc------ccceeEEEE-CC--EEE-Eec----------CCCCeEEEEEC---CCCcEEEEEECCCcccccccccccc
Confidence 1121 134577888 65 344 432 22457888887 444554433321
Q ss_pred -ceeccceeCCCC-cEEEEEeecCCccEEEEEEcCC
Q 012630 217 -LRFRGVSWCDDS-LALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 217 -~~~~~~~Ws~D~-~al~~~~~~~~~~~~ly~v~~~ 250 (459)
....+++|++|+ .+|+... .+.++|+|++.
T Consensus 205 ~~v~nGIa~~~~~~~lfVTgk----~~~~v~~i~l~ 236 (266)
T 2iwa_A 205 IDVLNGIAWDQENKRIFVTGK----LWPKLFEIKLH 236 (266)
T ss_dssp CCCEEEEEEETTTTEEEEEET----TCSEEEEEEEE
T ss_pred cCceEEEEEcCCCCEEEEECC----CCCeEEEEEEe
Confidence 123678999986 6666543 34468888764
No 221
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=92.97 E-value=0.098 Score=48.51 Aligned_cols=41 Identities=15% Similarity=0.236 Sum_probs=34.5
Q ss_pred CceEEEEEEC-CCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 398 LQKELIKYQR-KDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 398 ~~~E~i~yks-~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
+..+.++|.+ .+|.+++.++|+|++|++++ ++|+||++...
T Consensus 13 g~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~P~vv~lHG~ 54 (280)
T 3ls2_A 13 GWHKQYTHSAVSTHCTMRFAVFLPPGASESN--KVPVLYWLSGL 54 (280)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECTTCBTTB--CEEEEEEECCT
T ss_pred ceEEEEEEechhcCCceEEEEEcCCCCCCCC--CcCEEEEeCCC
Confidence 4667778866 58999999999999998655 89999999885
No 222
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=92.94 E-value=3 Score=38.84 Aligned_cols=137 Identities=14% Similarity=0.034 Sum_probs=78.2
Q ss_pred ceEEEcCCCc-eeecCCC--ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccccc
Q 012630 76 QLVLATLDGT-VKEFGPP--AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 76 qL~~v~~~G~-~~~l~~~--~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P 152 (459)
.++.++.+|+ ...+..+ ....+++++|||+.|+..+. ....++.+|.+|+.+..+.-. ...+
T Consensus 57 ~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~------------~~~~v~~vd~~Gk~l~~~~~~---~~~~ 121 (276)
T 3no2_A 57 GAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCG------------HPSTILEVNMKGEVLSKTEFE---TGIE 121 (276)
T ss_dssp EEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEES------------TTEEEEEECTTSCEEEEEEEC---CSCS
T ss_pred CEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecC------------CCCEEEEEeCCCCEEEEEecc---CCCC
Confidence 4777777554 4455543 34568899999998866542 135678888888877665321 1100
Q ss_pred ccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEE
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALV 232 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~ 232 (459)
.....++.+...+||. .|+ +.. ....|+.++. +| +..--.........+...++|..++
T Consensus 122 ----~~~~~~~~v~~~~~G~-~lv-~~~-----------~~~~v~~~d~---~G-~~~w~~~~~~~~~~~~~~~~g~~~v 180 (276)
T 3no2_A 122 ----RPHAQFRQINKNKKGN-YLV-PLF-----------ATSEVREIAP---NG-QLLNSVKLSGTPFSSAFLDNGDCLV 180 (276)
T ss_dssp ----SGGGSCSCCEECTTSC-EEE-EET-----------TTTEEEEECT---TS-CEEEEEECSSCCCEEEECTTSCEEE
T ss_pred ----cccccccCceECCCCC-EEE-Eec-----------CCCEEEEECC---CC-CEEEEEECCCCccceeEcCCCCEEE
Confidence 0112345667888888 443 211 1246888888 65 4322222222222344566776666
Q ss_pred EEeecCCccEEEEEEcCCCC
Q 012630 233 QETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 233 ~~~~~~~~~~~ly~v~~~~~ 252 (459)
.... ..+++.++++++
T Consensus 181 ~~~~----~~~v~~~d~~tG 196 (276)
T 3no2_A 181 ACGD----AHCFVQLNLESN 196 (276)
T ss_dssp ECBT----TSEEEEECTTTC
T ss_pred EeCC----CCeEEEEeCcCC
Confidence 5432 235999998865
No 223
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=92.90 E-value=1.4 Score=42.45 Aligned_cols=73 Identities=11% Similarity=0.114 Sum_probs=43.8
Q ss_pred ccceeeeEEecCCCceEEEEEeccCCccccccCCCCe-EEeccCCCCCCCCc-eEecc--ccceeccceeCCCCcEEEEE
Q 012630 159 REGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDI-IYTQPAEPVEGEEP-EILHK--LDLRFRGVSWCDDSLALVQE 234 (459)
Q Consensus 159 ~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~-l~~~~~~pf~g~~~-~~L~~--~~~~~~~~~Ws~D~~al~~~ 234 (459)
...+..+.|+|||. .|+-. ..| .. |.+++. ..++. ..+.. .......+.|++|+..|+..
T Consensus 195 ~~~v~~~~~s~~g~-~l~s~-s~d-----------~~~v~iwd~---~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 195 TNPIKMVRLNRKSD-MVATC-SQD-----------GTIIRVFKT---EDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp SSCEEEEEECTTSS-EEEEE-ETT-----------CSEEEEEET---TTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE
T ss_pred CCceEEEEECCCCC-EEEEE-eCC-----------CCEEEEEEC---CCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE
Confidence 34567899999998 55532 211 23 566666 32233 33331 23446778999998777765
Q ss_pred eecCCccEEEEEEcC
Q 012630 235 TWFKTTQTRTWLISP 249 (459)
Q Consensus 235 ~~~~~~~~~ly~v~~ 249 (459)
. .++..++|.+..
T Consensus 259 s--~d~~v~iw~~~~ 271 (355)
T 3vu4_A 259 S--DKWTLHVFEIFN 271 (355)
T ss_dssp E--TTCEEEEEESSC
T ss_pred E--CCCEEEEEEccC
Confidence 5 256677777653
No 224
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=92.83 E-value=0.17 Score=46.82 Aligned_cols=44 Identities=25% Similarity=0.300 Sum_probs=36.7
Q ss_pred cCCceEEEEEECC-CCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 396 STLQKELIKYQRK-DGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 396 ~~~~~E~i~yks~-DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
..++.+.++|.+. +|.++..++|+|++|++++ ++|+||++...-
T Consensus 28 ~~g~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~--~~P~vv~lHG~g 72 (268)
T 1jjf_A 28 PRGQVVNISYFSTATNSTRPARVYLPPGYSKDK--KYSVLYLLHGIG 72 (268)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEECTTCCTTS--CBCEEEEECCTT
T ss_pred CCceEEEEEEeccccCCceEEEEEeCCCCCCCC--CccEEEEECCCC
Confidence 3467888999765 7899999999999997655 899999998853
No 225
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.72 E-value=2.8 Score=38.38 Aligned_cols=134 Identities=11% Similarity=0.121 Sum_probs=76.5
Q ss_pred hcceEEEcCCCce-eecCCC--ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 74 TTQLVLATLDGTV-KEFGPP--AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~~G~~-~~l~~~--~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
...|++++.+|+. +.+... ....++.++|||+ |++... ....+++||.+|..+..+...
T Consensus 99 ~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------------~~~~i~~~~~~g~~~~~~~~~----- 160 (286)
T 1q7f_A 99 THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR-IIVVEC------------KVMRVIIFDQNGNVLHKFGCS----- 160 (286)
T ss_dssp GCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC-EEEEET------------TTTEEEEECTTSCEEEEEECT-----
T ss_pred CCEEEEECCCCcEEEEecCccCCCceEEEEeCCCC-EEEEEC------------CCCEEEEEcCCCCEEEEeCCC-----
Confidence 4567777775543 344332 2346889999997 544431 235688999888766655321
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc--ceeccceeCCCC
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD--LRFRGVSWCDDS 228 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~--~~~~~~~Ws~D~ 228 (459)
.....++.+.++|||. |+.+... ...|++++. +|.....+.... ....+++.++||
T Consensus 161 ------~~~~~p~~i~~~~~g~--l~v~~~~-----------~~~i~~~~~---~g~~~~~~~~~g~~~~p~~i~~d~~G 218 (286)
T 1q7f_A 161 ------KHLEFPNGVVVNDKQE--IFISDNR-----------AHCVKVFNY---EGQYLRQIGGEGITNYPIGVGINSNG 218 (286)
T ss_dssp ------TTCSSEEEEEECSSSE--EEEEEGG-----------GTEEEEEET---TCCEEEEESCTTTSCSEEEEEECTTC
T ss_pred ------CccCCcEEEEECCCCC--EEEEECC-----------CCEEEEEcC---CCCEEEEEccCCccCCCcEEEECCCC
Confidence 0113567899999976 4433221 235777776 552222332111 234557888888
Q ss_pred cEEEEEeecCCccEEEEEEcCC
Q 012630 229 LALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v~~~ 250 (459)
..++.... + ...|.+++++
T Consensus 219 ~l~v~~~~-~--~~~i~~~~~~ 237 (286)
T 1q7f_A 219 EILIADNH-N--NFNLTIFTQD 237 (286)
T ss_dssp CEEEEECS-S--SCEEEEECTT
T ss_pred CEEEEeCC-C--CEEEEEECCC
Confidence 76666532 1 1257777764
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.62 E-value=2.7 Score=38.85 Aligned_cols=145 Identities=12% Similarity=0.091 Sum_probs=77.9
Q ss_pred hcceEEEcC-CCceeecCC------CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeee-ecc
Q 012630 74 TTQLVLATL-DGTVKEFGP------PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQL-CEL 145 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~------~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~l-t~~ 145 (459)
...|++++. +|+.+.+.. ......+.++||+..|++... ...++++|.+ +....+ ...
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------------~~~l~~~d~~-g~~~~~~~~~ 110 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------------RLGLLVVQTD-GTFEEIAKKD 110 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------------TTEEEEEETT-SCEEECCSBC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-------------CCCEEEEeCC-CCEEEEEecc
Confidence 356888887 777766543 133468899999334555531 1358889988 445444 321
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEEEeccCC---ccc-cccCCCCeEEeccCCCCCCCCceEeccccceecc
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGG---AAK-VEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRG 221 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g---~~~-~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~ 221 (459)
. ... ....+..+.+.+||. |+++...+.. +.. ........|+.++. +| +.+.+........+
T Consensus 111 ~--~~~------~~~~~~~i~~d~~g~--l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~g-~~~~~~~~~~~~~~ 176 (314)
T 1pjx_A 111 S--EGR------RMQGCNDCAFDYEGN--LWITAPAGEVAPADYTRSMQEKFGSIYCFTT---DG-QMIQVDTAFQFPNG 176 (314)
T ss_dssp T--TSC------BCBCCCEEEECTTSC--EEEEECBCBCTTSCCCBTTSSSCEEEEEECT---TS-CEEEEEEEESSEEE
T ss_pred C--CCc------cccCCcCEEECCCCC--EEEEecCcccccccccccccCCCCeEEEECC---CC-CEEEeccCCCCcce
Confidence 1 000 113467889999986 4433321110 000 00011257888887 54 65555433223456
Q ss_pred ceeC----CCCc-EEEEEeecCCccEEEEEEcCC
Q 012630 222 VSWC----DDSL-ALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 222 ~~Ws----~D~~-al~~~~~~~~~~~~ly~v~~~ 250 (459)
+.|+ +|+. .++.... ...|++++++
T Consensus 177 i~~~~~~d~dg~~l~v~~~~----~~~i~~~~~~ 206 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETP----TKKLWSYDIK 206 (314)
T ss_dssp EEEEECTTSCEEEEEEEETT----TTEEEEEEEE
T ss_pred EEEecccCCCCCEEEEEECC----CCeEEEEECC
Confidence 7898 8874 4444321 2246666654
No 227
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=92.54 E-value=0.099 Score=52.09 Aligned_cols=42 Identities=10% Similarity=0.012 Sum_probs=35.7
Q ss_pred CCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 397 TLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 397 ~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
....|.|+|++.||.+|+|+|++|++.+ + ++|+||++++--.
T Consensus 89 g~~~e~v~~~~~~g~~l~~~l~~P~~~~--~--~~P~Vv~~HG~g~ 130 (398)
T 3nuz_A 89 GYRLEKWEFYPLPKCVSTFLVLIPDNIN--K--PVPAILCIPGSGG 130 (398)
T ss_dssp SEEEEEEEECCSTTBCEEEEEEEESSCC--S--CEEEEEEECCTTC
T ss_pred CEEEEEEEEEcCCCcEEEEEEEeCCCCC--C--CccEEEEEcCCCC
Confidence 3478999999999999999999998752 3 7999999998644
No 228
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.38 E-value=2.5 Score=38.90 Aligned_cols=52 Identities=15% Similarity=0.331 Sum_probs=37.0
Q ss_pred hcceEEEcC-CCceeec-C---CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce
Q 012630 74 TTQLVLATL-DGTVKEF-G---PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF 138 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l-~---~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~ 138 (459)
.+.|.+.|+ +|+..++ . ....+..+.|||||++|+..+. ...+.+|++..++
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~-------------Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS-------------SAEVQLWDVQQQK 100 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-------------TSEEEEEETTTTE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC-------------CCcEEEeecCCce
Confidence 356778888 7875543 2 2345689999999999987752 3678999987544
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.34 E-value=1.7 Score=40.51 Aligned_cols=133 Identities=10% Similarity=0.146 Sum_probs=74.4
Q ss_pred hhcceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeecccccc
Q 012630 73 TTTQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLVE 149 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~~ 149 (459)
....++++|. +++.. .|..+. ....+++||++|.++ + ....++++|.+. +.++.|.-. .+
T Consensus 105 ~~~~v~v~D~~t~~~~~ti~~~~--eG~glt~dg~~L~~S-d------------Gs~~i~~iDp~T~~v~~~I~V~--~~ 167 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQVRSFNYDG--EGWGLTHNDQYLIMS-D------------GTPVLRFLDPESLTPVRTITVT--AH 167 (262)
T ss_dssp SSSEEEEEETTTCCEEEEEECSS--CCCCEEECSSCEEEC-C------------SSSEEEEECTTTCSEEEEEECE--ET
T ss_pred eCCEEEEEECccCcEEEEEECCC--CceEEecCCCEEEEE-C------------CCCeEEEEcCCCCeEEEEEEec--cC
Confidence 3467888888 66543 454443 456777899887554 2 136688899764 444444221 11
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-------------
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD------------- 216 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~------------- 216 (459)
..|+ .....+.|. ||. +|+.. +..+.|+++|. ..|+........
T Consensus 168 g~~~------~~lNELe~~-~G~---lyan~----------w~~~~I~vIDp---~tG~V~~~Id~~~L~~~~~~~~~~~ 224 (262)
T 3nol_A 168 GEEL------PELNELEWV-DGE---IFANV----------WQTNKIVRIDP---ETGKVTGIIDLNGILAEAGPLPSPI 224 (262)
T ss_dssp TEEC------CCEEEEEEE-TTE---EEEEE----------TTSSEEEEECT---TTCBEEEEEECTTGGGGSCSCCSSC
T ss_pred Cccc------cccceeEEE-CCE---EEEEE----------ccCCeEEEEEC---CCCcEEEEEECCcCccccccccCcC
Confidence 1121 233467887 553 34432 23457888876 333554433221
Q ss_pred ceeccceeCCCC-cEEEEEeecCCccEEEEEEcC
Q 012630 217 LRFRGVSWCDDS-LALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 217 ~~~~~~~Ws~D~-~al~~~~~~~~~~~~ly~v~~ 249 (459)
....+|+|++++ ..|+... .|.++|.|.+
T Consensus 225 ~vlNGIA~dp~~~~lfVTGK----~Wp~~~ev~~ 254 (262)
T 3nol_A 225 DVLNGIAWDKEHHRLFVTGK----LWPKVFEITL 254 (262)
T ss_dssp CCEEEEEEETTTTEEEEEET----TCSEEEEEEE
T ss_pred CceEEEEEcCCCCEEEEECC----CCCceEEEEE
Confidence 123678999874 5556543 4456887754
No 230
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.92 E-value=1.6 Score=42.75 Aligned_cols=123 Identities=12% Similarity=0.036 Sum_probs=63.1
Q ss_pred CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEec----CCceeeeeecccccccccccccc--cccceee
Q 012630 91 PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTA----DGKFVRQLCELPLVENIPIAYNS--VREGMRL 164 (459)
Q Consensus 91 ~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~----~g~~~~~lt~~p~~~~~P~~~~~--~~~~~r~ 164 (459)
....+..+.|+|||++|+..+. ...+.+||+ .|...+.+....... +.+.. .......
T Consensus 110 h~~~v~~~~~~~~~~~l~s~s~-------------dg~i~vwd~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~~~ 173 (437)
T 3gre_A 110 CSSTVTQITMIPNFDAFAVSSK-------------DGQIIVLKVNHYQQESEVKFLNCECIRK---INLKNFGKNEYAVR 173 (437)
T ss_dssp CSSCEEEEEECTTSSEEEEEET-------------TSEEEEEEEEEEEETTEEEEEEEEEEEE---EEGGGGSSCCCEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeC-------------CCEEEEEEeccccCCceeeccccceeEE---EEccCcccccCceE
Confidence 3556789999999999987753 367888887 343333222111000 00000 1111222
Q ss_pred eE--EecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccc---cceeccceeCCCCcEEEEEeecCC
Q 012630 165 IS--WRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKL---DLRFRGVSWCDDSLALVQETWFKT 239 (459)
Q Consensus 165 ~~--WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~---~~~~~~~~Ws~D~~al~~~~~~~~ 239 (459)
+. |++|+. .|+.. .. ...|++++. ..++....... ......+.|++++..|+.... +
T Consensus 174 ~~~~~~~~~~-~l~~~-~~-----------d~~i~iwd~---~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~--d 235 (437)
T 3gre_A 174 MRAFVNEEKS-LLVAL-TN-----------LSRVIIFDI---RTLERLQIIENSPRHGAVSSICIDEECCVLILGTT--R 235 (437)
T ss_dssp EEEEECSSCE-EEEEE-ET-----------TSEEEEEET---TTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET--T
T ss_pred EEEEEcCCCC-EEEEE-eC-----------CCeEEEEeC---CCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC--C
Confidence 22 556665 44422 11 235677776 33243332222 334677899999876665442 3
Q ss_pred ccEEEEEE
Q 012630 240 TQTRTWLI 247 (459)
Q Consensus 240 ~~~~ly~v 247 (459)
+..++|-+
T Consensus 236 g~i~iwd~ 243 (437)
T 3gre_A 236 GIIDIWDI 243 (437)
T ss_dssp SCEEEEET
T ss_pred CeEEEEEc
Confidence 44555543
No 231
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=91.89 E-value=13 Score=38.51 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=76.0
Q ss_pred cceEEEcC---CCce-eecCCCceeeecccC----CCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeecc
Q 012630 75 TQLVLATL---DGTV-KEFGPPAIYTAVEPS----PDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCEL 145 (459)
Q Consensus 75 sqL~~v~~---~G~~-~~l~~~~~~~~~~~S----PDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~ 145 (459)
+.|.++|+ +++. ..+..+.....+.+| |||++|++... .+..+.|+|....+ ++.+.-.
T Consensus 218 g~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~------------~~~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 218 GKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY------------WPPQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp SEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE------------ETTEEEEEETTTCCEEEEEECC
T ss_pred CeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEc------------cCCeEEEEECCCCcEEEEEecc
Confidence 57899998 4433 234334444689999 79999977742 24667888865433 3333211
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc--ccceeccce
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK--LDLRFRGVS 223 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~--~~~~~~~~~ 223 (459)
..... ...+ .....+..+.-|++++ .+++. ..+ .+.|++++. ...+...++. ......++.
T Consensus 286 ~~~~~-~~~~-~p~~rva~i~~s~~~~-~~vv~-~~~----------~g~v~~vd~---~~~~~~~v~~i~~~~~~~d~~ 348 (567)
T 1qks_A 286 GMTYD-EQEY-HPEPRVAAILASHYRP-EFIVN-VKE----------TGKILLVDY---TDLNNLKTTEISAERFLHDGG 348 (567)
T ss_dssp EECTT-TCCE-ESCCCEEEEEECSSSS-EEEEE-ETT----------TTEEEEEET---TCSSEEEEEEEECCSSEEEEE
T ss_pred ccccc-cccc-cCCCceEEEEEcCCCC-EEEEE-ecC----------CCeEEEEec---CCCccceeeeeeccccccCce
Confidence 10000 0000 0012345677788877 33322 221 346778876 3211111211 122234568
Q ss_pred eCCCCcEEEEEeecCCccEEEEEEcCCCC
Q 012630 224 WCDDSLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 224 Ws~D~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
|++|+..|+..... ..+|.+||..++
T Consensus 349 ~~pdgr~~~va~~~---sn~V~ViD~~t~ 374 (567)
T 1qks_A 349 LDGSHRYFITAANA---RNKLVVIDTKEG 374 (567)
T ss_dssp ECTTSCEEEEEEGG---GTEEEEEETTTT
T ss_pred ECCCCCEEEEEeCC---CCeEEEEECCCC
Confidence 99998655543321 124888998764
No 232
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.86 E-value=1 Score=43.92 Aligned_cols=129 Identities=11% Similarity=0.107 Sum_probs=68.8
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC---CC
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD---RP 172 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD---g~ 172 (459)
..+.|.|||++|+++. + ..+|++++.+|+....+...+ ..+.....++..+.++|| +.
T Consensus 21 ~~i~~~pdG~~l~V~e-~------------~G~i~~~~~~g~~~~~~~~~~------~v~~~g~~g~~gia~~pdf~~~g 81 (353)
T 2g8s_A 21 WALAFLPDNHGMLITL-R------------GGELRHWQAGKGLSAPLSGVP------DVWAHGQGGLLDVVLAPDFAQSR 81 (353)
T ss_dssp EEEEECSTTCCEEEEE-T------------TTEEEEEETTTEECCCCBSCC------CCCCSTTCSEEEEEECTTHHHHC
T ss_pred EEEEEcCCCCEEEEEe-C------------CceEEEEeCCCceeeEecCCc------ccccCCCCCceeEEECCCCCCCC
Confidence 4889999999765553 1 256888887665433343332 111112346678999997 55
Q ss_pred ceEEEEEeccCCccccccCCCCeEEeccCCCCCCC-----CceEecc-cc------ceeccceeCCCCcEEEEEeec---
Q 012630 173 STLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE-----EPEILHK-LD------LRFRGVSWCDDSLALVQETWF--- 237 (459)
Q Consensus 173 ~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~-----~~~~L~~-~~------~~~~~~~Ws~D~~al~~~~~~--- 237 (459)
.||........+. .....|+.++. +++ +.+.|.. .+ ....++.|++||..++.....
T Consensus 82 -~lYv~~~~~~~~g----~~~~~v~r~~~---~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~ 153 (353)
T 2g8s_A 82 -RIWLSYSEVGDDG----KAGTAVGYGRL---SDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQR 153 (353)
T ss_dssp -EEEEEEEEECSSS----CEEEEEEEEEE---CTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCG
T ss_pred -EEEEEEeCCCCCC----CceeEEEEEEE---CCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCC
Confidence 5665543322110 01234555544 221 2333322 11 112468999999666654321
Q ss_pred ------CCccEEEEEEcCCC
Q 012630 238 ------KTTQTRTWLISPGS 251 (459)
Q Consensus 238 ------~~~~~~ly~v~~~~ 251 (459)
+....+|+++++++
T Consensus 154 ~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 154 PTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp GGGGCTTSCTTEEEEEETTS
T ss_pred CccCCCCCCCeEEEEECCCC
Confidence 11234788998863
No 233
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=91.83 E-value=2.1 Score=42.92 Aligned_cols=135 Identities=10% Similarity=0.011 Sum_probs=75.4
Q ss_pred cceEEEcC-CCceeecCCC-ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee--eeeeccccccc
Q 012630 75 TQLVLATL-DGTVKEFGPP-AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV--RQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~~-~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~--~~lt~~p~~~~ 150 (459)
..|.++++ ++.++.+... .....+.++|||++|+++.... ......+++++.+|+.. +.+..
T Consensus 159 ~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~--------~~~~~~v~~~~~~g~~~~~~~l~~------ 224 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQN--------NNDRPNNYILTRESGFKVITELTK------ 224 (430)
T ss_dssp EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCS--------CTTSEEEEEEEGGGTSCSEEEEEE------
T ss_pred CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCC--------CcccceEEEEeCCCceeeeeeecc------
Confidence 46667777 4555555443 2345899999999887764210 01123345556555432 22211
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc--ceeccceeCCCC
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD--LRFRGVSWCDDS 228 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~--~~~~~~~Ws~D~ 228 (459)
-.++..+.+.|+.. .|+++.. ..+.|+.++. +++....+.... ..-.+++++++|
T Consensus 225 --------~~~p~giavdp~~g-~lyv~d~-----------~~~~V~~~~~---~~~~~~~~~~~~~~~~P~gia~~pdG 281 (430)
T 3tc9_A 225 --------GQNCNGAETHPING-ELYFNSW-----------NAGQVFRYDF---TTQETTPLFTIQDSGWEFHIQFHPSG 281 (430)
T ss_dssp --------CSSCCCEEECTTTC-CEEEEET-----------TTTEEEEEET---TTTEEEEEEECSSSSCCEEEEECTTS
T ss_pred --------CCCceEEEEeCCCC-EEEEEEC-----------CCCEEEEEEC---CCCcEEEEEEcCCCCcceeEEEcCCC
Confidence 23566788999544 5776542 1347888887 653443443322 123468999998
Q ss_pred c-EEEEEeecCCccEEEEEEcCC
Q 012630 229 L-ALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 229 ~-al~~~~~~~~~~~~ly~v~~~ 250 (459)
. +++.+. ...+|++++.+
T Consensus 282 ~~lyv~d~----~~~~I~~~~~d 300 (430)
T 3tc9_A 282 NYAYIVVV----NQHYILRSDYD 300 (430)
T ss_dssp SEEEEEET----TTTEEEEEEEE
T ss_pred CEEEEEEC----CCCEEEEEeCC
Confidence 5 555543 22357777654
No 234
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=91.81 E-value=2.5 Score=41.73 Aligned_cols=130 Identities=12% Similarity=0.057 Sum_probs=73.2
Q ss_pred hcceEEEcC-CCcee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeecccccc
Q 012630 74 TTQLVLATL-DGTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVE 149 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~ 149 (459)
.+.|.+.|+ +++.. .+. ....+..+.|||||++|+..+. ...+.+||+. |..+..+...
T Consensus 289 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~-------------dg~i~vwd~~~~~~~~~~~~h---- 351 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM-------------DTTIRIWDLENGELMYTLQGH---- 351 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET-------------TSCEEEEETTTTEEEEEECCC----
T ss_pred CCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCCcEEEEEeCC----
Confidence 456777777 55433 333 3455679999999999887753 3678999986 4444444221
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCc
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSL 229 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~ 229 (459)
...+..+.|++ . .|+-. ..| ..|.+++. ..++.............+.|++++.
T Consensus 352 ---------~~~v~~~~~~~--~-~l~s~-s~d-----------g~v~vwd~---~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (464)
T 3v7d_B 352 ---------TALVGLLRLSD--K-FLVSA-AAD-----------GSIRGWDA---NDYSRKFSYHHTNLSAITTFYVSDN 404 (464)
T ss_dssp ---------SSCEEEEEECS--S-EEEEE-ETT-----------SEEEEEET---TTCCEEEEEECTTCCCEEEEEECSS
T ss_pred ---------CCcEEEEEEcC--C-EEEEE-eCC-----------CcEEEEEC---CCCceeeeecCCCCccEEEEEeCCC
Confidence 22455777873 3 44422 221 24666666 3323222222333344568888876
Q ss_pred EEEEEeecCCccEEEEEEcCCCC
Q 012630 230 ALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
.++... ++. +.+.+..++
T Consensus 405 ~l~~~~---dg~--i~iwd~~~g 422 (464)
T 3v7d_B 405 ILVSGS---ENQ--FNIYNLRSG 422 (464)
T ss_dssp EEEEEE---TTE--EEEEETTTC
T ss_pred EEEEec---CCe--EEEEECCCC
Confidence 666544 233 455555543
No 235
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.63 E-value=2 Score=42.10 Aligned_cols=51 Identities=2% Similarity=0.089 Sum_probs=36.0
Q ss_pred cceEEEcC-CCcee-ecCC---CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce
Q 012630 75 TQLVLATL-DGTVK-EFGP---PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF 138 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~~---~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~ 138 (459)
+.|.++|+ +++.. .+.. ...+..+.|||||++|+..+. ...+.+||+..+.
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-------------dg~i~iwd~~~~~ 247 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT-------------RGIIDIWDIRFNV 247 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET-------------TSCEEEEETTTTE
T ss_pred CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC-------------CCeEEEEEcCCcc
Confidence 56778888 66543 3433 355689999999999987753 3678999986443
No 236
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.59 E-value=5 Score=36.09 Aligned_cols=132 Identities=11% Similarity=-0.008 Sum_probs=71.8
Q ss_pred hcceEEEcC-CCceeecCCC--ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 74 TTQLVLATL-DGTVKEFGPP--AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~l~~~--~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
...|++++. ++....+... .....+.++|||+ |++... ...++++|.+|+....+...
T Consensus 45 ~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-------------~~~i~~~d~~~~~~~~~~~~----- 105 (270)
T 1rwi_B 45 YGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-------------NNRVVTLAAGSNNQTVLPFD----- 105 (270)
T ss_dssp SCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET-------------TTEEEEECTTCSCCEECCCC-----
T ss_pred CCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC-------------CCEEEEEeCCCceEeeeecC-----
Confidence 356777776 3343333222 2345788999998 555531 25688899887655433211
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccceeCCCCc
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSWCDDSL 229 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~Ws~D~~ 229 (459)
....+..+.+.+||. |+++... ...|+.++. ............ ....++.+++||.
T Consensus 106 -------~~~~p~~i~~~~~g~--l~v~~~~-----------~~~i~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 106 -------GLNYPEGLAVDTQGA--VYVADRG-----------NNRVVKLAA---GSKTQTVLPFTGLNDPDGVAVDNSGN 162 (270)
T ss_dssp -------SCSSEEEEEECTTCC--EEEEEGG-----------GTEEEEECT---TCCSCEECCCCSCCSCCCEEECTTCC
T ss_pred -------CcCCCcceEECCCCC--EEEEECC-----------CCEEEEEEC---CCceeEeeccccCCCceeEEEeCCCC
Confidence 013567889999876 4443221 235666655 221222221111 2345678888887
Q ss_pred EEEEEeecCCccEEEEEEcCCC
Q 012630 230 ALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v~~~~ 251 (459)
.++.... ...|+++++++
T Consensus 163 l~v~~~~----~~~i~~~~~~~ 180 (270)
T 1rwi_B 163 VYVTDTD----NNRVVKLEAES 180 (270)
T ss_dssp EEEEEGG----GTEEEEECTTT
T ss_pred EEEEECC----CCEEEEEecCC
Confidence 6665432 23588888764
No 237
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=91.58 E-value=0.85 Score=47.13 Aligned_cols=131 Identities=6% Similarity=-0.043 Sum_probs=68.7
Q ss_pred cceEEEcC-CCc-ee-ecC-CCceeeec--ccCCCC-CeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeeccc
Q 012630 75 TQLVLATL-DGT-VK-EFG-PPAIYTAV--EPSPDQ-KYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCELP 146 (459)
Q Consensus 75 sqL~~v~~-~G~-~~-~l~-~~~~~~~~--~~SPDG-~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~p 146 (459)
+.|.+.|+ +++ .. .+. ....+.++ .||||| +.|+-.+ ....+.|||+..+. ...+...
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S-------------~D~tvklWD~~~~~~~~~~~~~- 352 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVA-------------VDGYFYIFNPKDIATTKTTVSR- 352 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEE-------------TTSEEEEECGGGHHHHCEEEEE-
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEec-------------cCCeEEEEECCCCCcccccccc-
Confidence 45566666 442 21 222 23445666 689999 5554443 23678999975322 2222110
Q ss_pred ccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCC
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCD 226 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~ 226 (459)
.+ ...+..+.|+||++ .++-. +.+ +.|.+++. -.+...+.|..-......++|+|
T Consensus 353 ----~~------~~~v~~v~fsp~~~-~l~s~----~~d--------~tv~lwd~--~~~~~~~~l~gH~~~V~sva~Sp 407 (524)
T 2j04_B 353 ----FR------GSNLVPVVYCPQIY-SYIYS----DGA--------SSLRAVPS--RAAFAVHPLVSRETTITAIGVSR 407 (524)
T ss_dssp ----CS------CCSCCCEEEETTTT-EEEEE----CSS--------SEEEEEET--TCTTCCEEEEECSSCEEEEECCS
T ss_pred ----cc------cCcccceEeCCCcC-eEEEe----CCC--------CcEEEEEC--cccccceeeecCCCceEEEEeCC
Confidence 00 01245789999988 44421 111 23555655 02222344544444567789999
Q ss_pred CCcEEEEEeecCCccEEEEE
Q 012630 227 DSLALVQETWFKTTQTRTWL 246 (459)
Q Consensus 227 D~~al~~~~~~~~~~~~ly~ 246 (459)
|+..|++.. .++..++|-
T Consensus 408 ~g~~l~Sgs--~Dgtv~lwd 425 (524)
T 2j04_B 408 LHPMVLAGS--ADGSLIITN 425 (524)
T ss_dssp SCCBCEEEE--TTTEEECCB
T ss_pred CCCeEEEEE--CCCEEEEEe
Confidence 986666544 244445543
No 238
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=91.47 E-value=0.15 Score=47.24 Aligned_cols=41 Identities=12% Similarity=0.155 Sum_probs=33.9
Q ss_pred CceEEEEEEC-CCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 398 LQKELIKYQR-KDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 398 ~~~E~i~yks-~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
+..+.+++.+ .+|.++..++|+|++|++++ ++|+||++...
T Consensus 15 g~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~--~~p~vv~lHG~ 56 (280)
T 3i6y_A 15 GWHKQYSHVSNTLNCAMRFAIYLPPQASTGA--KVPVLYWLSGL 56 (280)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECGGGGTTC--CEEEEEEECCT
T ss_pred CcEEEEEEeccccCCeeEEEEEeCCCCCCCC--CccEEEEecCC
Confidence 4567777755 59999999999999997555 89999999984
No 239
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=91.38 E-value=1.3 Score=43.84 Aligned_cols=82 Identities=9% Similarity=0.085 Sum_probs=46.0
Q ss_pred eeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCc-EEEEEeecCCcc
Q 012630 163 RLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSL-ALVQETWFKTTQ 241 (459)
Q Consensus 163 r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~-al~~~~~~~~~~ 241 (459)
..+..++|+. +||.+..++..+. .+ ..-++|+++|+ ..++...-.....+..++..++|+. .|+...+. .
T Consensus 283 q~~a~~~~~~-~lyV~~~~~~~~~-hk-~~~~~V~viD~---~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~---~ 353 (386)
T 3sjl_D 283 QQVAYHRALD-RIYLLVDQRDEWR-HK-TASRFVVVLDA---KTGERLAKFEMGHEIDSINVSQDEKPLLYALSTG---D 353 (386)
T ss_dssp SCEEEETTTT-EEEEEEEECCTTC-TT-SCEEEEEEEET---TTCCEEEEEEEEEEECEEEECSSSSCEEEEEETT---T
T ss_pred ceeeECCCCC-eEEEEeccccccc-cC-CCCCEEEEEEC---CCCeEEEEEECCCCcceEEECCCCCeEEEEEcCC---C
Confidence 4466677777 6665543322110 00 11258999998 4334443333455566788999985 44443321 2
Q ss_pred EEEEEEcCCCCC
Q 012630 242 TRTWLISPGSKD 253 (459)
Q Consensus 242 ~~ly~v~~~~~~ 253 (459)
..+.++|..+++
T Consensus 354 ~~VsViD~~t~k 365 (386)
T 3sjl_D 354 KTLYIHDAESGE 365 (386)
T ss_dssp TEEEEEETTTCC
T ss_pred CeEEEEECCCCc
Confidence 358899987653
No 240
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.20 E-value=6.8 Score=35.16 Aligned_cols=111 Identities=13% Similarity=-0.003 Sum_probs=62.5
Q ss_pred eeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCce
Q 012630 95 YTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPST 174 (459)
Q Consensus 95 ~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~ 174 (459)
..++.++|||+ |.+... ....+++++.+++......... ...+..+.+.+||.
T Consensus 152 p~~i~~~~~g~-l~v~~~------------~~~~i~~~~~~~~~~~~~~~~~------------~~~p~~i~~d~~g~-- 204 (270)
T 1rwi_B 152 PDGVAVDNSGN-VYVTDT------------DNNRVVKLEAESNNQVVLPFTD------------ITAPWGIAVDEAGT-- 204 (270)
T ss_dssp CCCEEECTTCC-EEEEEG------------GGTEEEEECTTTCCEEECCCSS------------CCSEEEEEECTTCC--
T ss_pred ceeEEEeCCCC-EEEEEC------------CCCEEEEEecCCCceEeecccC------------CCCceEEEECCCCC--
Confidence 35788999997 544431 1356888998876554332110 13566889999974
Q ss_pred EEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccceeCCCCcEEEEEeecCCccEEEEEEcCC
Q 012630 175 LYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVSWCDDSLALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 175 l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~ 250 (459)
|+++... ...|+.++. ++.....+.... ....++.+++||..++.+.. ..+|.+++..
T Consensus 205 l~v~~~~-----------~~~v~~~~~---~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~----~~~v~~~~~~ 263 (270)
T 1rwi_B 205 VYVTEHN-----------TNQVVKLLA---GSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG----NDRVVKLTSL 263 (270)
T ss_dssp EEEEETT-----------TSCEEEECT---TCSCCEECCCCSCSCEEEEEECTTCCEEEEEGG----GTEEEEECCC
T ss_pred EEEEECC-----------CCcEEEEcC---CCCcceeeccCCCCCceeEEECCCCCEEEEECC----CCEEEEEcCC
Confidence 4443211 235777776 553333322221 23456788888876565432 2246666654
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=91.07 E-value=2.7 Score=39.36 Aligned_cols=133 Identities=11% Similarity=0.095 Sum_probs=71.7
Q ss_pred hhcceEEEcC-CCceee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeecccccc
Q 012630 73 TTTQLVLATL-DGTVKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLVE 149 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~~ 149 (459)
..++|.++|+ +|++.. +.-+.......++++|++|.++.. ....++++|.+. +.+.++.- .
T Consensus 42 ~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~------------~~~~v~viD~~t~~v~~~i~~---g- 105 (266)
T 2iwa_A 42 GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW------------LKNIGFIYDRRTLSNIKNFTH---Q- 105 (266)
T ss_dssp TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET------------TCSEEEEEETTTTEEEEEEEC---C-
T ss_pred CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe------------cCCEEEEEECCCCcEEEEEEC---C-
Confidence 3578999999 887663 221221222345556888766642 247789999764 44444421 1
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCC-ceEecccc--c---eeccce
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE-PEILHKLD--L---RFRGVS 223 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~-~~~L~~~~--~---~~~~~~ 223 (459)
.| ....-++||+ +|+.. ++ .+.|+++|. ...+ .+.+.-.. . ....+.
T Consensus 106 -~~----------~g~glt~Dg~-~l~vs---~g---------s~~l~viD~---~t~~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 106 -MK----------DGWGLATDGK-ILYGS---DG---------TSILYEIDP---HTFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp -SS----------SCCEEEECSS-SEEEE---CS---------SSEEEEECT---TTCCEEEEEECEETTEECCCEEEEE
T ss_pred -CC----------CeEEEEECCC-EEEEE---CC---------CCeEEEEEC---CCCcEEEEEEECCCCcccccceeEE
Confidence 11 1234566887 66633 22 236888876 3212 33332111 1 123466
Q ss_pred eCCCCcEEEEEeecCCccEEEEEEcCCCCC
Q 012630 224 WCDDSLALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 224 Ws~D~~al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
|. |+.+++. .|.. ..|.+||+++++
T Consensus 159 ~~-dg~lyvn-~~~~---~~V~vID~~tg~ 183 (266)
T 2iwa_A 159 YI-NGEVWAN-IWQT---DCIARISAKDGT 183 (266)
T ss_dssp EE-TTEEEEE-ETTS---SEEEEEETTTCC
T ss_pred EE-CCEEEEe-cCCC---CeEEEEECCCCc
Confidence 77 6754433 3322 269999998764
No 242
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=91.06 E-value=0.47 Score=49.07 Aligned_cols=119 Identities=8% Similarity=0.058 Sum_probs=58.9
Q ss_pred CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCC
Q 012630 92 PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 92 ~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
.+.+.+++|||||++|+..+. ...+.+||..++......... . . ...-.+..+.|+|||
T Consensus 397 ~~~V~sva~Sp~g~~l~Sgs~-------------Dgtv~lwd~~~~~~~~~~~~~--~--~----~~~~~v~~v~~sp~g 455 (524)
T 2j04_B 397 ETTITAIGVSRLHPMVLAGSA-------------DGSLIITNAARRLLHGIKNSS--A--T----QKSLRLWKWDYSIKD 455 (524)
T ss_dssp SSCEEEEECCSSCCBCEEEET-------------TTEEECCBSCSSTTTCC--------------CCCCEEEECBCCSSS
T ss_pred CCceEEEEeCCCCCeEEEEEC-------------CCEEEEEechHhhccccccCc--c--c----eeeeEEEEeccCCCC
Confidence 455679999999999876652 366788887643221111000 0 0 000123467889998
Q ss_pred CceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCC---cEEEEEeecCCccEEEEEEc
Q 012630 172 PSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDS---LALVQETWFKTTQTRTWLIS 248 (459)
Q Consensus 172 ~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~---~al~~~~~~~~~~~~ly~v~ 248 (459)
. ++. ..+... ++.+.. .|.....|......+..++|+||+ ..+.+.. .++..+||.+.
T Consensus 456 ~-~~~---~~~~~~----------~~~~~~---~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~--~~g~vrlw~l~ 516 (524)
T 2j04_B 456 D-KYR---IDSSYE----------VYPLTV---NDVSKAKIDAHGINITCTKWNETSAGGKCYAFSN--SAGLLTLEYLS 516 (524)
T ss_dssp C-EEE---ECCCCC----------CCC----------------CCCSCCCEEECCSTTTTTEEEEEC--TTSEEEEEECS
T ss_pred C-eEE---ccCCce----------eccccc---CCcceeeecCCCceEEEEECCCCCCccHHHHhhc--cCceEEEEEcc
Confidence 8 332 111110 111111 232233343334456779999985 4555544 35778888876
Q ss_pred CC
Q 012630 249 PG 250 (459)
Q Consensus 249 ~~ 250 (459)
.+
T Consensus 517 ~~ 518 (524)
T 2j04_B 517 LE 518 (524)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 243
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=91.06 E-value=3.8 Score=39.99 Aligned_cols=26 Identities=15% Similarity=0.199 Sum_probs=18.3
Q ss_pred ccceeCCCCcEEEEEeecCCccEEEEEE
Q 012630 220 RGVSWCDDSLALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 220 ~~~~Ws~D~~al~~~~~~~~~~~~ly~v 247 (459)
..++|+|||..|++.. .++..+||.+
T Consensus 330 s~vafSPDG~~LaSGS--~D~TIklWd~ 355 (356)
T 2w18_A 330 SFVKWSGTDSHLLAGQ--KDGNIFVYHY 355 (356)
T ss_dssp CEEEECSSSSEEEEEC--TTSCEEEEEE
T ss_pred EEEEECCCCCEEEEEE--CCCcEEEecC
Confidence 3468999987777655 3567778764
No 244
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.05 E-value=2.7 Score=40.87 Aligned_cols=160 Identities=17% Similarity=0.181 Sum_probs=83.5
Q ss_pred HHHHHhhcceEEEcCCCceeecC------C-CceeeecccCCC---CCeEEEEEeccCcccccccCCCCcceEEEecCCc
Q 012630 68 LFEHYTTTQLVLATLDGTVKEFG------P-PAIYTAVEPSPD---QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK 137 (459)
Q Consensus 68 ~f~~~~~sqL~~v~~~G~~~~l~------~-~~~~~~~~~SPD---G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~ 137 (459)
+|.-...+.|++++.+|+ +.+. . .....++.++|| +.+|.+.....+-. ......|..++.+++
T Consensus 42 l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~-----~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 42 YLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG-----GHIRNRVIRGRLDGS 115 (354)
T ss_dssp EEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG-----GCEEEEEEEEEECSS
T ss_pred EEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC-----CCcceEEEEEEECCC
Confidence 333334477888876665 4332 1 233468999999 77776653210000 001145677776654
Q ss_pred e-----eeee-ecccccccccccccccccceeeeEEecCCCceEEEEEeccCCcccc---ccCCCCeEEeccCCCCCCCC
Q 012630 138 F-----VRQL-CELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKV---EVSPRDIIYTQPAEPVEGEE 208 (459)
Q Consensus 138 ~-----~~~l-t~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~---~~~~~~~l~~~~~~pf~g~~ 208 (459)
. .+.| +..|. .....++.+.|.|||. ||++. -+.+.... .......|+.++. +|.-
T Consensus 116 ~~~~~~~~~l~~~~~~---------~~~h~~~~l~~~pDG~--Lyvt~-G~~~~~~~~~d~~~~~G~I~ri~~---dG~~ 180 (354)
T 3a9g_A 116 TFKLKEVKTLIDGIPG---------AYIHNGGRIRFGPDGM--LYITT-GDAADPRLAQDLSSLAGKILRVDE---EGRP 180 (354)
T ss_dssp SCCEEEEEEEEEEEEC---------CSSCCCCCEEECTTSC--EEEEC-CCTTCGGGGTCTTCCSSEEEEECT---TSCC
T ss_pred CcCcCccEEEEEcCCC---------CCCcCCceEEECCCCc--EEEEE-CCCCCCccccCCCCCCeEEEEEcC---CCCC
Confidence 1 1212 22221 1123456899999985 66553 23332211 1123468888887 6520
Q ss_pred -------ceEeccccce-eccceeCC-CCcEEEEEeecCCccEEEEEEcC
Q 012630 209 -------PEILHKLDLR-FRGVSWCD-DSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 209 -------~~~L~~~~~~-~~~~~Ws~-D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
..+++....+ -.+++|++ ++..++.+... .+...+.++..
T Consensus 181 p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~-~~~dei~~i~~ 229 (354)
T 3a9g_A 181 PADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGP-VGHDEVNIILK 229 (354)
T ss_dssp CTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCS-SSCCEEEEECT
T ss_pred CCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCC-CCCcEEEEecC
Confidence 1233333333 45689998 57777776532 34556777754
No 245
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=91.00 E-value=0.2 Score=49.72 Aligned_cols=41 Identities=7% Similarity=-0.132 Sum_probs=35.0
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
...|.|+|++.||.+|+|+|++|++.+ + ++|+||++.+--.
T Consensus 85 ~~~e~v~~~~~~g~~l~~~l~~P~~~~--~--~~P~Vl~~HG~g~ 125 (391)
T 3g8y_A 85 YILEKWEFYPFPKSVSTFLVLKPEHLK--G--AVPGVLCIPGSGR 125 (391)
T ss_dssp EEEEEEEECCSTTCCEEEEEEEETTCC--S--CEEEEEEECCTTC
T ss_pred EEEEEEEEEcCCCCEEEEEEEeCCCCC--C--CCCEEEEeCCCCC
Confidence 567889999999999999999998752 3 7999999998644
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=90.97 E-value=2.7 Score=39.31 Aligned_cols=133 Identities=8% Similarity=-0.042 Sum_probs=74.4
Q ss_pred hhcceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-ceeeeeecccccc
Q 012630 73 TTTQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFVRQLCELPLVE 149 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~~~lt~~p~~~ 149 (459)
....++++|. +++.. .|..+. ....+++||++|.++ + ....++++|.+. +.++.|.-. ..
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~~--eGwGLt~Dg~~L~vS-d------------Gs~~l~~iDp~T~~v~~~I~V~--~~ 176 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYSG--EGWGLCYWNGKLVRS-D------------GGTMLTFHEPDGFALVGAVQVK--LR 176 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECSS--CCCCEEEETTEEEEE-C------------SSSEEEEECTTTCCEEEEEECE--ET
T ss_pred cCCEEEEEECCcCcEEEEEeCCC--ceeEEecCCCEEEEE-C------------CCCEEEEEcCCCCeEEEEEEeC--CC
Confidence 3467888888 66544 454433 246677899987555 2 136788999764 444433221 11
Q ss_pred cccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-------------
Q 012630 150 NIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD------------- 216 (459)
Q Consensus 150 ~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~------------- 216 (459)
..|+ .....+.|. ||. | |+.. +..+.|.++|. ..|+........
T Consensus 177 g~~v------~~lNeLe~~-dG~--l-yanv----------w~s~~I~vIDp---~TG~V~~~Idl~~L~~~~~~~~~~~ 233 (268)
T 3nok_A 177 GQPV------ELINELECA-NGV--I-YANI----------WHSSDVLEIDP---ATGTVVGVIDASALTRAVAGQVTNP 233 (268)
T ss_dssp TEEC------CCEEEEEEE-TTE--E-EEEE----------TTCSEEEEECT---TTCBEEEEEECHHHHHHHTTTCCCT
T ss_pred Cccc------ccccccEEe-CCE--E-EEEE----------CCCCeEEEEeC---CCCcEEEEEECCCCcccccccccCc
Confidence 1111 123467888 653 3 3432 23467888876 433554433211
Q ss_pred -ceeccceeCCCC-cEEEEEeecCCccEEEEEEcC
Q 012630 217 -LRFRGVSWCDDS-LALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 217 -~~~~~~~Ws~D~-~al~~~~~~~~~~~~ly~v~~ 249 (459)
....+|+|.+++ ..|+... .|.++|.|.+
T Consensus 234 ~~vlNGIA~dp~~~rlfVTGK----~Wp~~~ev~~ 264 (268)
T 3nok_A 234 EAVLNGIAVEPGSGRIFMTGK----LWPRLFEVRL 264 (268)
T ss_dssp TCCEEEEEECTTTCCEEEEET----TCSEEEEEEE
T ss_pred CCceEEEEEcCCCCEEEEeCC----CCCceEEEEE
Confidence 124679999874 6666543 4456887743
No 247
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=90.87 E-value=6.3 Score=37.52 Aligned_cols=87 Identities=13% Similarity=0.109 Sum_probs=47.5
Q ss_pred cceEEEcCCCceeecCC--------CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce-eeeeecc
Q 012630 75 TQLVLATLDGTVKEFGP--------PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF-VRQLCEL 145 (459)
Q Consensus 75 sqL~~v~~~G~~~~l~~--------~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~-~~~lt~~ 145 (459)
.+|+.++ +|+.+++.. -....++.++|||+ |.++-... .+ .....+.+||+..++ ++.+. .
T Consensus 42 ~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~----~~---~~~~~i~~~d~~tg~~~~~~~-~ 111 (343)
T 2qe8_A 42 MQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGN----QS---KSVPKLVAWDTLNNQLSRVIY-L 111 (343)
T ss_dssp CSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHH----HH---TSCCEEEEEETTTTEEEEEEE-C
T ss_pred eEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCC----Cc---CCCCeEEEEECCCCeEEEEEE-C
Confidence 3677777 776665532 12346889999986 55553211 00 013578999987554 44442 2
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEE
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWV 178 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~ 178 (459)
+..... ....+..+...+++. .+|.+
T Consensus 112 ~~~~~~------~~~~~~~v~vd~~~g-~~yvt 137 (343)
T 2qe8_A 112 PPPITL------SNSFVNDLAVDLIHN-FVYIS 137 (343)
T ss_dssp CTTTSC------TTCCCCEEEEETTTT-EEEEE
T ss_pred Chhhcc------cccccceEEEecCCC-EEEEE
Confidence 211111 112446788888765 55544
No 248
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=90.86 E-value=0.37 Score=46.28 Aligned_cols=43 Identities=21% Similarity=0.420 Sum_probs=35.5
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
.....|.++|++.||.+|+++++.|++ .+.+ +.|+||++.+--
T Consensus 64 ~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~~~--~~p~vv~~hG~~ 106 (367)
T 2hdw_A 64 AKVEHRKVTFANRYGITLAADLYLPKN-RGGD--RLPAIVIGGPFG 106 (367)
T ss_dssp TTEEEEEEEEECTTSCEEEEEEEEESS-CCSS--CEEEEEEECCTT
T ss_pred CCceeEEEEEecCCCCEEEEEEEeCCC-CCCC--CCCEEEEECCCC
Confidence 345789999999999999999999987 3233 799999998754
No 249
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=90.82 E-value=4.1 Score=40.71 Aligned_cols=115 Identities=10% Similarity=0.140 Sum_probs=69.0
Q ss_pred eecccCC-CCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCce
Q 012630 96 TAVEPSP-DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPST 174 (459)
Q Consensus 96 ~~~~~SP-DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~ 174 (459)
..+.++| ++..|.++. . . ..|.++|++++.+..+... ...++.+.|+++|. .
T Consensus 140 ~~lavdp~~~g~Lyv~d-~-----------~-~~I~~id~~~~~v~~~~~~-------------~~~P~~ia~d~~G~-~ 192 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVG-E-----------Q-HPTRLIDFEKEYVSTVYSG-------------LSKVRTICWTHEAD-S 192 (430)
T ss_dssp CEEEEETTEEEEEEEEE-B-----------T-EEEEEEETTTTEEEEEECC-------------CSCEEEEEECTTSS-E
T ss_pred CEEEECCCCCCeEEEEe-C-----------C-CcEEEEECCCCEEEEEecC-------------CCCcceEEEeCCCC-E
Confidence 4678999 577776653 2 1 5688899998877766441 23577899999998 7
Q ss_pred EEEEEeccCCccccccCCCCeEEeccCCCCCCCC--ceEeccccceeccceeCC-CCcEEEEEeecCCccEEEEEEcCCC
Q 012630 175 LYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE--PEILHKLDLRFRGVSWCD-DSLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 175 l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~--~~~L~~~~~~~~~~~Ws~-D~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
|+++....+ ..+..++.++. +|+- .+.+.. .....+++.++ ++.+++.+. ...+|+++++++
T Consensus 193 lyvad~~~~-------~~~~~v~~~~~---~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~----~~~~V~~~~~~~ 257 (430)
T 3tc9_A 193 MIITNDQNN-------NDRPNNYILTR---ESGFKVITELTK-GQNCNGAETHPINGELYFNSW----NAGQVFRYDFTT 257 (430)
T ss_dssp EEEEECCSC-------TTSEEEEEEEG---GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEET----TTTEEEEEETTT
T ss_pred EEEEeCCCC-------cccceEEEEeC---CCceeeeeeecc-CCCceEEEEeCCCCEEEEEEC----CCCEEEEEECCC
Confidence 777653211 11224555544 3311 123332 22345577888 577666653 223699999875
Q ss_pred C
Q 012630 252 K 252 (459)
Q Consensus 252 ~ 252 (459)
+
T Consensus 258 ~ 258 (430)
T 3tc9_A 258 Q 258 (430)
T ss_dssp T
T ss_pred C
Confidence 3
No 250
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=90.77 E-value=3.6 Score=37.96 Aligned_cols=135 Identities=11% Similarity=0.133 Sum_probs=72.4
Q ss_pred cceEEEcCCCceeecCC-CceeeecccC----CCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceee---eeecc
Q 012630 75 TQLVLATLDGTVKEFGP-PAIYTAVEPS----PDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVR---QLCEL 145 (459)
Q Consensus 75 sqL~~v~~~G~~~~l~~-~~~~~~~~~S----PDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~---~lt~~ 145 (459)
..|++++..|+.+.+.. ......+.|+ |||++|++... ....+++++.+ .+... .+...
T Consensus 153 ~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~------------~~~~i~~~~~~~~g~~~~~~~~~~~ 220 (314)
T 1pjx_A 153 GSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAET------------PTKKLWSYDIKGPAKIENKKVWGHI 220 (314)
T ss_dssp EEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEET------------TTTEEEEEEEEETTEEEEEEEEEEC
T ss_pred CeEEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEEC------------CCCeEEEEECCCCCccccceEEEEC
Confidence 46777776665554432 1223578899 99998866642 13567888864 22221 12221
Q ss_pred cccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCC-CCCceEecccc-ceeccce
Q 012630 146 PLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVE-GEEPEILHKLD-LRFRGVS 223 (459)
Q Consensus 146 p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~-g~~~~~L~~~~-~~~~~~~ 223 (459)
+... ...+..+.+.+||. | |+.... ...|+.++. . | +........ ....++.
T Consensus 221 ~~~~---------~~~p~~i~~d~~G~--l-~v~~~~----------~~~i~~~d~---~~g-~~~~~~~~~~~~~~~i~ 274 (314)
T 1pjx_A 221 PGTH---------EGGADGMDFDEDNN--L-LVANWG----------SSHIEVFGP---DGG-QPKMRIRCPFEKPSNLH 274 (314)
T ss_dssp CCCS---------SCEEEEEEEBTTCC--E-EEEEET----------TTEEEEECT---TCB-SCSEEEECSSSCEEEEE
T ss_pred CCCC---------CCCCCceEECCCCC--E-EEEEcC----------CCEEEEEcC---CCC-cEeEEEeCCCCCceeEE
Confidence 1100 03456789999986 3 332211 235777766 4 4 433222222 3456678
Q ss_pred eCCCCc-EEEEEeecCCccEEEEEEcCCC
Q 012630 224 WCDDSL-ALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 224 Ws~D~~-al~~~~~~~~~~~~ly~v~~~~ 251 (459)
+++|+. .++.... ...|+++++..
T Consensus 275 ~~~dg~~l~v~~~~----~~~l~~~~~~~ 299 (314)
T 1pjx_A 275 FKPQTKTIFVTEHE----NNAVWKFEWQR 299 (314)
T ss_dssp ECTTSSEEEEEETT----TTEEEEEECSS
T ss_pred ECCCCCEEEEEeCC----CCeEEEEeCCC
Confidence 888875 4444321 12477887653
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.70 E-value=5.4 Score=37.52 Aligned_cols=145 Identities=13% Similarity=0.023 Sum_probs=77.2
Q ss_pred ceEEEcC-CCceeecCC--C----ceeeecccCC-CCCeEEEEEeccCccc-----ccccCCCCcceEEEecCCceeeee
Q 012630 76 QLVLATL-DGTVKEFGP--P----AIYTAVEPSP-DQKYILITSIDRPYSF-----TVSYTKFPQKVQVWTADGKFVRQL 142 (459)
Q Consensus 76 qL~~v~~-~G~~~~l~~--~----~~~~~~~~SP-DG~~l~~~~~~~p~s~-----~v~~~~~~~~~~v~d~~g~~~~~l 142 (459)
.|++++. +|+.+.+.. . ....++.+.| ||+ |.|+.....|.. .+........++++|.+++.+..+
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 3666776 455555432 1 1235788999 995 555532211110 000011235688888876665544
Q ss_pred ecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCC---CCceEecccccee
Q 012630 143 CELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG---EEPEILHKLDLRF 219 (459)
Q Consensus 143 t~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g---~~~~~L~~~~~~~ 219 (459)
... -..+..+.|+|||. .|++++.. ...|++++. ++ +..+.+..... -
T Consensus 181 ~~~-------------~~~p~gia~~~dg~-~lyv~d~~-----------~~~I~~~~~---~~~~~~~~~~~~~~~g-P 231 (322)
T 2fp8_A 181 LKE-------------LHVPGGAEVSADSS-FVLVAEFL-----------SHQIVKYWL---EGPKKGTAEVLVKIPN-P 231 (322)
T ss_dssp EEE-------------ESCCCEEEECTTSS-EEEEEEGG-----------GTEEEEEES---SSTTTTCEEEEEECSS-E
T ss_pred ccC-------------CccCcceEECCCCC-EEEEEeCC-----------CCeEEEEEC---CCCcCCccceEEeCCC-C
Confidence 221 12345789999998 77766532 235666665 33 13333332222 4
Q ss_pred ccceeCCCCcEEEEEeecC------CccEEEEEEcCC
Q 012630 220 RGVSWCDDSLALVQETWFK------TTQTRTWLISPG 250 (459)
Q Consensus 220 ~~~~Ws~D~~al~~~~~~~------~~~~~ly~v~~~ 250 (459)
.++...++|..++...... .....+++++++
T Consensus 232 ~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 232 GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CCeEECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 4567778886666543200 124568899875
No 252
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.33 E-value=12 Score=39.18 Aligned_cols=140 Identities=9% Similarity=0.027 Sum_probs=79.5
Q ss_pred HHHhhcceEEEcCCCc---eeecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeec
Q 012630 70 EHYTTTQLVLATLDGT---VKEFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCE 144 (459)
Q Consensus 70 ~~~~~sqL~~v~~~G~---~~~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~ 144 (459)
.|..+..|.+++++|. ...+. .-.....+.++|++++|.++-. ....|+.++++|... ..+..
T Consensus 13 ~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~------------~~~~I~r~~~~g~~~~~~v~~ 80 (619)
T 3s94_A 13 LYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------------SEEAIKRTEFNKTESVQNVVV 80 (619)
T ss_dssp EEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEET------------TTTEEEEEEC-----CEEEEC
T ss_pred EEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEEC------------CCCeEEEEEccCCCceEEEEe
Confidence 3556788999999543 23222 2334468899999999877732 135678888887632 22222
Q ss_pred ccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ceeccce
Q 012630 145 LPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LRFRGVS 223 (459)
Q Consensus 145 ~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~~~~~~ 223 (459)
.. -..+.+++..+.+. .|||+... .+.|.+++. +|+..+.|.... ..-.+++
T Consensus 81 ~~------------~~~P~GlAvD~~~~-~ly~~d~~-----------~~~I~v~~~---dG~~~~~l~~~~l~~P~~Ia 133 (619)
T 3s94_A 81 SG------------LLSPDGLACDWLGE-KLYWTDSE-----------TNRIEVSNL---DGSLRKVLFWQELDQPRAIA 133 (619)
T ss_dssp SS------------CSCEEEEEEETTTT-EEEEEETT-----------TTEEEEEET---TSCSCEEEECSSCSCCCCEE
T ss_pred CC------------CCCcCeEEEEecCC-EEEEEeCC-----------CCEEEEEEC---CCCCEEEEEeCCCCCCceEE
Confidence 11 12455677777666 89988521 356888888 774555555322 2234567
Q ss_pred eCCC-CcEEEEEeecCCccEEEEEEcCCC
Q 012630 224 WCDD-SLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 224 Ws~D-~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
..+. |..++.+ | ....+|+++++++
T Consensus 134 vdp~~g~ly~tD-~--g~~~~I~r~~~dG 159 (619)
T 3s94_A 134 LDPSSGFMYWTD-W--GEVPKIERAGMDG 159 (619)
T ss_dssp EETTTTEEEEEE-C--SSSCEEEEEETTS
T ss_pred EecCCCeEEEec-c--CCCCEEEEEECCC
Confidence 7664 5555544 3 2246799998874
No 253
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=90.17 E-value=4.4 Score=37.01 Aligned_cols=113 Identities=9% Similarity=0.064 Sum_probs=64.2
Q ss_pred CceeeecccCC-CCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC
Q 012630 92 PAIYTAVEPSP-DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD 170 (459)
Q Consensus 92 ~~~~~~~~~SP-DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD 170 (459)
...+..+.|+| ++++|+..+. ...+.+||. +.....+... ....+..+.|+|+
T Consensus 142 ~~~v~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~-~~~~~~~~~~------------~~~~i~~~~~~~~ 195 (313)
T 3odt_A 142 NASVWDAKVVSFSENKFLTASA-------------DKTIKLWQN-DKVIKTFSGI------------HNDVVRHLAVVDD 195 (313)
T ss_dssp SSCEEEEEEEETTTTEEEEEET-------------TSCEEEEET-TEEEEEECSS------------CSSCEEEEEEEET
T ss_pred CCceeEEEEccCCCCEEEEEEC-------------CCCEEEEec-CceEEEEecc------------CcccEEEEEEcCC
Confidence 44556788888 9998877753 367888983 3333333220 1235668899999
Q ss_pred CCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceE-eccccceeccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 171 RPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEI-LHKLDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 171 g~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~-L~~~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
+. ++ +... ...|++++. ..++... +.........+.|++|+. |+.... ++ .+++.++
T Consensus 196 ~~--~~-~~~~-----------dg~i~i~d~---~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~--dg--~v~iwd~ 253 (313)
T 3odt_A 196 GH--FI-SCSN-----------DGLIKLVDM---HTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGE--DR--TVRIWSK 253 (313)
T ss_dssp TE--EE-EEET-----------TSEEEEEET---TTCCEEEEEECCSSCEEEEEECTTSC-EEEEET--TS--EEEEECT
T ss_pred Ce--EE-EccC-----------CCeEEEEEC---CchhhhhhhhcCCceEEEEEEecCCC-EEEEec--CC--EEEEEEC
Confidence 87 33 2221 225667766 3224333 322344567789999984 443331 23 3555666
Q ss_pred CCC
Q 012630 250 GSK 252 (459)
Q Consensus 250 ~~~ 252 (459)
.++
T Consensus 254 ~~~ 256 (313)
T 3odt_A 254 ENG 256 (313)
T ss_dssp TTC
T ss_pred CCC
Confidence 544
No 254
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=89.65 E-value=0.35 Score=51.52 Aligned_cols=37 Identities=22% Similarity=0.315 Sum_probs=31.6
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcC
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYP 439 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp 439 (459)
...|.++++..||.+|+++|++|++. + ++|+||++.|
T Consensus 35 ~~~~~v~i~~~DG~~L~~~l~~P~~~---~--~~PvIl~~hp 71 (652)
T 2b9v_A 35 YIKREVMVPMRDGVKLYTVIVIPKNA---R--NAPILLTRTP 71 (652)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC---C--SEEEEEEEES
T ss_pred cEEEEEEEECCCCcEEEEEEEecCCC---C--CccEEEEECC
Confidence 45788999999999999999999863 2 7999998754
No 255
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=89.56 E-value=0.63 Score=46.18 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=42.1
Q ss_pred hcceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeee
Q 012630 74 TTQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLC 143 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt 143 (459)
..++|++|+ ++++. .+.-+....++.+||||+.++|+++. ....+.|+|.. ++.++.+.
T Consensus 310 ~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~-----------~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 310 SRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST-----------GDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET-----------TTTEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC-----------CCCeEEEEECCCCcEEEEec
Confidence 368999999 77654 44434445689999999977788653 35788999976 55555553
No 256
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=89.52 E-value=0.16 Score=49.87 Aligned_cols=76 Identities=16% Similarity=0.187 Sum_probs=54.7
Q ss_pred EEEEEeecCCCCcceEEEECCCc--ceeecccccCCCCCCcCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEE
Q 012630 358 KILTSKESKTEITQYWIQSWPHK--KCRQITDFPHPYPLLSTLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLF 435 (459)
Q Consensus 358 ~i~~~~~s~~~P~ely~~~~~~g--~~~~LT~~~~~~~~~~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il 435 (459)
.+++..++..+|+++|+.+..+. ..++++.++..+... ....|.+++++ ||.+|+|+|++|++. + ++|+||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~-dg~~i~~~l~~p~~~---~--~~P~vl 156 (386)
T 2jbw_A 84 ELLMSAALCAQYAQFLWFDERRQKGQARKVELYQKAAPLL-SPPAERHELVV-DGIPMPVYVRIPEGP---G--PHPAVI 156 (386)
T ss_dssp HHHHHHHHHHHHHHTTCCSTHHHHHHHHHHHHHHHHGGGS-SSCEEEEEEEE-TTEEEEEEEECCSSS---C--CEEEEE
T ss_pred HHHHHHHHhhceeeeeccCCCCCHHHHHHHHHHHHHHhhc-CCCeEEEEEEe-CCEEEEEEEEcCCCC---C--CCCEEE
Confidence 35566777889999988663111 234577776655432 35789999998 999999999999873 2 689999
Q ss_pred EEcCC
Q 012630 436 WAYPG 440 (459)
Q Consensus 436 ~~Yp~ 440 (459)
++..-
T Consensus 157 ~~hG~ 161 (386)
T 2jbw_A 157 MLGGL 161 (386)
T ss_dssp EECCS
T ss_pred EeCCC
Confidence 87543
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.46 E-value=3.7 Score=38.32 Aligned_cols=130 Identities=13% Similarity=0.113 Sum_probs=69.5
Q ss_pred cceEEEcC-CCceee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeecccccccc
Q 012630 75 TQLVLATL-DGTVKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENI 151 (459)
Q Consensus 75 sqL~~v~~-~G~~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~ 151 (459)
|+|.++|+ +|++.. +.-+..+....++++|++|..+.- ....++++|.+ .+.+.++.-.+
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw------------~~~~v~v~D~~t~~~~~ti~~~~----- 127 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW------------KNGLGFVWNIRNLRQVRSFNYDG----- 127 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES------------SSSEEEEEETTTCCEEEEEECSS-----
T ss_pred ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe------------eCCEEEEEECccCcEEEEEECCC-----
Confidence 56999999 887653 322322333445668888866642 24778999976 55555553311
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCC-ceEeccc--ccee---ccceeC
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEE-PEILHKL--DLRF---RGVSWC 225 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~-~~~L~~~--~~~~---~~~~Ws 225 (459)
. ...-++|++ .|+.. |+ .+.|+.+|. ...+ .+.+.-. ...+ ..+.|.
T Consensus 128 ---------e--G~glt~dg~-~L~~S---dG---------s~~i~~iDp---~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 128 ---------E--GWGLTHNDQ-YLIMS---DG---------TPVLRFLDP---ESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp ---------C--CCCEEECSS-CEEEC---CS---------SSEEEEECT---TTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred ---------C--ceEEecCCC-EEEEE---CC---------CCeEEEEcC---CCCeEEEEEEeccCCccccccceeEEE
Confidence 1 123335666 55522 22 235777776 2212 2222211 1112 236776
Q ss_pred CCCcEEEEEeecCCccEEEEEEcCCCCC
Q 012630 226 DDSLALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 226 ~D~~al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
||.+++. .|.. ..|++||+++++
T Consensus 181 -~G~lyan-~w~~---~~I~vIDp~tG~ 203 (262)
T 3nol_A 181 -DGEIFAN-VWQT---NKIVRIDPETGK 203 (262)
T ss_dssp -TTEEEEE-ETTS---SEEEEECTTTCB
T ss_pred -CCEEEEE-EccC---CeEEEEECCCCc
Confidence 6754443 3422 269999998764
No 258
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.38 E-value=2.7 Score=43.93 Aligned_cols=81 Identities=10% Similarity=0.037 Sum_probs=48.0
Q ss_pred cceEEEcC-C--Cce--eecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceee---eeeccc
Q 012630 75 TQLVLATL-D--GTV--KEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVR---QLCELP 146 (459)
Q Consensus 75 sqL~~v~~-~--G~~--~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~---~lt~~p 146 (459)
+.+.+||. + |++ +.+.-+.....+.+||||||+++.. .....+.|+|.+..+.. .|...
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~------------~~s~~VsVid~~~~~~~~~~~l~~~- 320 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAG------------KLSPTVTVLDVTRFDAVFYENADPR- 320 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEEC------------TTSSBEEEEEGGGHHHHHHSCCCGG-
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeC------------CCCCeEEEEECcccccccccccCcc-
Confidence 45888887 5 433 3344444456899999999987763 24567888887632110 01000
Q ss_pred ccccccccccccccceeeeEEecCC
Q 012630 147 LVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
...+..-.+-.+++.+.++|||
T Consensus 321 ---~~v~~~v~vG~gP~h~aF~~dG 342 (595)
T 1fwx_A 321 ---SAVVAEPELGLGPLHTAFDGRG 342 (595)
T ss_dssp ---GGEEECCBCCSCEEEEEECTTS
T ss_pred ---cceEEEcCCCCCcceEEECCCC
Confidence 0001111234689999999998
No 259
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=89.30 E-value=0.53 Score=46.40 Aligned_cols=92 Identities=13% Similarity=0.039 Sum_probs=52.4
Q ss_pred ceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeeccccccccc
Q 012630 76 QLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIP 152 (459)
Q Consensus 76 qL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P 152 (459)
++.++|. ++++. .+..+..- .+.+||||++|++....-+ ... .......+.++|.. ++.++.|. .+....
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~--r~~-~G~~~~~VsviD~~T~~vv~~I~-v~~~~~-- 119 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFA--RSA-KGKRTDYVEVFDPVTFLPIADIE-LPDAPR-- 119 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEET--TTT-SSSEEEEEEEECTTTCCEEEEEE-ETTSCS--
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEccccc--ccc-cCCCCCEEEEEECCCCCEEEEEE-CCCccc--
Confidence 7889998 77655 33222222 7999999999977742100 000 00113568999976 44555552 210000
Q ss_pred ccccccccceeeeEEecCCCceEEEE
Q 012630 153 IAYNSVREGMRLISWRADRPSTLYWV 178 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~~l~~~ 178 (459)
+ .+-..++.+..||||+ +||..
T Consensus 120 --~-~~g~~P~~ia~SpDGk-~lyVa 141 (368)
T 1mda_H 120 --F-SVGPRVHIIGNCASSA-CLLFF 141 (368)
T ss_dssp --C-CBSCCTTSEEECTTSS-CEEEE
T ss_pred --c-ccCCCcceEEEcCCCC-EEEEE
Confidence 0 0113567899999999 66644
No 260
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=89.15 E-value=2.5 Score=41.19 Aligned_cols=59 Identities=10% Similarity=0.132 Sum_probs=39.8
Q ss_pred CceeeecccCC--------CCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeecccccccccccccccccce
Q 012630 92 PAIYTAVEPSP--------DQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGM 162 (459)
Q Consensus 92 ~~~~~~~~~SP--------DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~ 162 (459)
.+.+.+++||| ||++||-.+. ...+.|||+. ++.+..+... ...+
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~~~las~s~-------------D~tv~~Wd~~~~~~~~~~~~~-------------~~~v 189 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAEQVIASVGD-------------DCTLIIWRLTDEGPILAGYPL-------------SSPG 189 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEEEEEEEEET-------------TSEEEEEEEETTEEEEEEEEC-------------SSCE
T ss_pred CCceEEEEEccccccccCCCCCEEEEEEC-------------CCeEEEEECCCCceeeeecCC-------------CCCc
Confidence 45568999998 9998877753 3778999975 4444333221 2345
Q ss_pred eeeEEecCCCceEE
Q 012630 163 RLISWRADRPSTLY 176 (459)
Q Consensus 163 r~~~WspDg~~~l~ 176 (459)
..+.|+|+++..|+
T Consensus 190 ~~v~~~p~~~~~l~ 203 (393)
T 4gq1_A 190 ISVQFRPSNPNQLI 203 (393)
T ss_dssp EEEEEETTEEEEEE
T ss_pred EEEEECCCCCceEE
Confidence 68899999874444
No 261
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=89.04 E-value=0.42 Score=50.51 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=31.4
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcC
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYP 439 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp 439 (459)
...|.++++..||.+|+++|++|++. + ++|+||++.|
T Consensus 23 ~~~~~v~i~~~DG~~L~~~~~~P~~~---~--~~P~vl~~hg 59 (615)
T 1mpx_A 23 YIKREVMIPMRDGVKLHTVIVLPKGA---K--NAPIVLTRTP 59 (615)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTC---C--SEEEEEEEES
T ss_pred CEEEEEEEECCCCCEEEEEEEeCCCC---C--CeeEEEEEcC
Confidence 46788999999999999999999863 3 7999998654
No 262
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=89.02 E-value=13 Score=35.04 Aligned_cols=119 Identities=13% Similarity=0.121 Sum_probs=64.9
Q ss_pred eeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-CceeeeeecccccccccccccccccceeeeEEecCCCc
Q 012630 95 YTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPS 173 (459)
Q Consensus 95 ~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~ 173 (459)
..++.++||+..|+++.. ....|.+|+.+ |+.++.+.... ...++..+.++| .
T Consensus 198 p~gia~d~~~g~l~v~d~------------~~~~I~~~~~~~G~~~~~~~~~~-----------~~~~~~~~~~~p--g- 251 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADR------------ENGRIQCFKTDTKEFVREIKHAS-----------FGRNVFAISYIP--G- 251 (329)
T ss_dssp EEEEEEETTTTEEEEEET------------TTTEEEEEETTTCCEEEEECCTT-----------TTTCEEEEEEET--T-
T ss_pred CcEEEEECCCCEEEEEEC------------CCCEEEEEECCCCcEEEEEeccc-----------cCCCcceeeecC--C-
Confidence 357889999777766631 34678999987 77666664321 123556788888 2
Q ss_pred eEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc----ccceeccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 174 TLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK----LDLRFRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 174 ~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~----~~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
.++... +.. -+.......|++++. ..++...... ......++++++||..++.+.. .. +|+++++
T Consensus 252 ~~~~~~---g~~-~v~~~~~~~v~~~~~---~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~--~~--~I~~~~~ 320 (329)
T 3fvz_A 252 FLFAVN---GKP-YFGDQEPVQGFVMNF---SSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAH--TN--TVWKFTL 320 (329)
T ss_dssp EEEEEE---CCC-CTTCSCCCCEEEEET---TTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESS--SC--CEEEEEE
T ss_pred EEEEeC---CCE-EeccCCCcEEEEEEc---CCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECC--CC--EEEEEeC
Confidence 344332 111 000012346777775 3234443322 1112355788899966666542 22 4666655
Q ss_pred C
Q 012630 250 G 250 (459)
Q Consensus 250 ~ 250 (459)
+
T Consensus 321 ~ 321 (329)
T 3fvz_A 321 T 321 (329)
T ss_dssp E
T ss_pred C
Confidence 4
No 263
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=88.42 E-value=0.5 Score=49.36 Aligned_cols=40 Identities=15% Similarity=0.262 Sum_probs=33.1
Q ss_pred CCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEE--cCCc
Q 012630 397 TLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWA--YPGE 441 (459)
Q Consensus 397 ~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~--Yp~e 441 (459)
....+.|.++.+||++|.++||+|.+ . + ++|+||.+ |.+.
T Consensus 38 ~~~~~~v~i~~~DG~~L~a~l~~P~~--~-~--~~P~vl~~~pyg~~ 79 (560)
T 3iii_A 38 MIMEKDGTVEMRDGEKLYINIFRPNK--D-G--KFPVVMSADTYGKD 79 (560)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEECSS--S-S--CEEEEEEEESSCTT
T ss_pred eEEEEEEEEECCCCcEEEEEEEecCC--C-C--CCCEEEEecCCCCC
Confidence 45788899999999999999999986 1 3 79999995 5543
No 264
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.22 E-value=8.6 Score=37.33 Aligned_cols=159 Identities=18% Similarity=0.184 Sum_probs=84.5
Q ss_pred hHHHHHHHh-hcceEEEcC-CCceeecC--------CCceeeecccCCC---CCeEEEEEeccCcccccccCCCCcceEE
Q 012630 65 DEYLFEHYT-TTQLVLATL-DGTVKEFG--------PPAIYTAVEPSPD---QKYILITSIDRPYSFTVSYTKFPQKVQV 131 (459)
Q Consensus 65 D~~~f~~~~-~sqL~~v~~-~G~~~~l~--------~~~~~~~~~~SPD---G~~l~~~~~~~p~s~~v~~~~~~~~~~v 131 (459)
|+.+|.-.+ .++|++++. +|+...+. ..+...++.++|| ..+|.+.-... -...|..
T Consensus 42 dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~----------~~~~v~R 111 (347)
T 3das_A 42 GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA----------SDNRIVR 111 (347)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS----------SSEEEEE
T ss_pred CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC----------CCCEEEE
Confidence 344544444 678888887 56654332 1233468999997 45554432110 0134555
Q ss_pred EecCCce--------ee-eeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCcccc---ccCCCCeEEec
Q 012630 132 WTADGKF--------VR-QLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKV---EVSPRDIIYTQ 199 (459)
Q Consensus 132 ~d~~g~~--------~~-~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~---~~~~~~~l~~~ 199 (459)
+..+++. .+ .++..|. ......+.+.|.|||. ||+. .-|.+.... ....+..|+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~---------~~~H~g~~l~fgpDG~--Lyvt-~Gd~~~~~~~qd~~~~~G~IlRi 179 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPK---------GVIHNGGRIAFGPDKM--LYAG-TGESGDTGLSQDRKSLGGKILRM 179 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECC---------CSSCCCCCEEECTTSC--EEEE-CBCTTCGGGTTCTTCSTTCEEEE
T ss_pred EEeCCCCcccccCCCcEEEEEcCCC---------CCCccCccccCCCCCC--EEEE-ECCCCCCccccCCCCCCCEEEEE
Confidence 5554421 11 1222221 1233557899999985 5554 333332211 11345788888
Q ss_pred cCCCCCCCC-------ceEeccccce-eccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 200 PAEPVEGEE-------PEILHKLDLR-FRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 200 ~~~pf~g~~-------~~~L~~~~~~-~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
+. +|.- ..+++....| -.+++|.++|..++.+... +....|.++..
T Consensus 180 ~~---dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~-~~~deln~i~~ 233 (347)
T 3das_A 180 TP---DGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQ-DTWDELNAIKP 233 (347)
T ss_dssp CT---TSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCS-SSCEEEEEECT
T ss_pred eC---CCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCC-CCCceeeEEcC
Confidence 87 6521 1234444444 4568999988777777532 34567777753
No 265
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=88.08 E-value=0.43 Score=44.45 Aligned_cols=41 Identities=7% Similarity=0.002 Sum_probs=34.3
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
...+.+.++|++.||..|+++++.|++ .+ +.|+||+++.--
T Consensus 52 ~~~~~~~~~~~~~~g~~i~~~~~~P~~---~~--~~p~vv~~HG~~ 92 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGNARITGWYAVPDK---EG--PHPAIVKYHGYN 92 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESS---CS--CEEEEEEECCTT
T ss_pred CCeEEEEEEEEccCCCEEEEEEEeeCC---CC--CccEEEEEcCCC
Confidence 345788999999999999999999986 23 689999998754
No 266
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=87.68 E-value=5.8 Score=38.30 Aligned_cols=123 Identities=17% Similarity=0.284 Sum_probs=68.6
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC---CC
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD---RP 172 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD---g~ 172 (459)
.++.|+|||+ |+++. . ...|++++ +| ....+...+. +.....++..+.++|| +.
T Consensus 34 ~~ia~~pdG~-l~V~e-~------------~g~I~~i~-~g-~~~~~~~~~v-------~~~g~~~p~gia~~pdf~~~g 90 (352)
T 2ism_A 34 WALAFLPDGG-MLIAE-R------------PGRIRLFR-EG-RLSTYAELSV-------YHRGESGLLGLALHPRFPQEP 90 (352)
T ss_dssp EEEEECTTSC-EEEEE-T------------TTEEEEEE-TT-EEEEEEECCC-------CCSTTCSEEEEEECTTTTTSC
T ss_pred eEEEEcCCCe-EEEEe-C------------CCeEEEEE-CC-CccEeecceE-------eecCCCCceeEEECCCCCCCC
Confidence 5899999998 54542 2 25678887 54 3444444331 0112347789999999 66
Q ss_pred ceEEEEEeccCCccccccCCCCeEEeccCCCCCCC---CceEecc-cc------ceeccceeCCCCcEEEEEeec-----
Q 012630 173 STLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGE---EPEILHK-LD------LRFRGVSWCDDSLALVQETWF----- 237 (459)
Q Consensus 173 ~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~---~~~~L~~-~~------~~~~~~~Ws~D~~al~~~~~~----- 237 (459)
.||.......+ .....|+.++. +++ +.+.|.. .+ ....++.+++||..++.....
T Consensus 91 -~lYv~~~~~~~------~~~~~v~r~~~---~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~ 160 (352)
T 2ism_A 91 -YVYAYRTVAEG------GLRNQVVRLRH---LGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYEREL 160 (352)
T ss_dssp -EEEEEEEECTT------SSEEEEEEEEE---CSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGG
T ss_pred -EEEEEEecCCC------CCccEEEEEEe---CCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCcc
Confidence 56655443221 11245666665 432 2233322 11 122568999999766654211
Q ss_pred ----CCccEEEEEEcCCC
Q 012630 238 ----KTTQTRTWLISPGS 251 (459)
Q Consensus 238 ----~~~~~~ly~v~~~~ 251 (459)
.....+|+++++++
T Consensus 161 ~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 161 AQDLASLGGKILRLTPEG 178 (352)
T ss_dssp GGCTTCSSSEEEEECTTS
T ss_pred ccCCCCCceEEEEEcCCC
Confidence 11235899998863
No 267
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.62 E-value=30 Score=36.23 Aligned_cols=114 Identities=14% Similarity=0.157 Sum_probs=67.6
Q ss_pred ecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceEE
Q 012630 97 AVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLY 176 (459)
Q Consensus 97 ~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~ 176 (459)
++++.+.++.|.++- .....|.+.+++|+..+.|.... -..|+.+.-.|... .||
T Consensus 396 GlAvD~~~~~lY~tD------------~~~~~I~v~~~~G~~~~~l~~~~------------l~~P~~iavdp~~G-~ly 450 (619)
T 3s94_A 396 GIAVDWVARNLYWTD------------TGTDRIEVTRLNGTMRKILISED------------LEEPRAIVLDPMVG-YMY 450 (619)
T ss_dssp EEEEETTTTEEEEEE------------TTTTEEEEEETTSCSCEEEECTT------------CCSEEEEEEETTTT-EEE
T ss_pred ceEEecccCcEEEEe------------CCCCcEEEEeCCCCeEEEEEECC------------CCCeeeEEEEcCCC-cEE
Confidence 555555566665552 12467888888887655554321 23678889998866 899
Q ss_pred EEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccc-eeccceeCCC-CcEEEEEeecCCccEEEEEEcCCCC
Q 012630 177 WVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDL-RFRGVSWCDD-SLALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 177 ~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~-~~~~~~Ws~D-~~al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
|+.. |. ...|+.+.. +|...+.|..... .-.+++.+++ +..++.+ ....+|+.+++++.
T Consensus 451 ~tD~---g~-------~~~I~r~~~---dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD----~~~~~I~~~~~dG~ 511 (619)
T 3s94_A 451 WTDW---GE-------IPKIERAAL---DGSDRVVLVNTSLGWPNGLALDYDEGKIYWGD----AKTDKIEVMNTDGT 511 (619)
T ss_dssp EEEC---SS-------SCEEEEEET---TSCSCEEEECSSCSCEEEEEEETTTTEEEEEE----TTTTEEEEEESSSC
T ss_pred EecC---CC-------CCEEEEEcc---CCCccEEEEeCCCCCCeeeEEcccCCEEEEEE----CCCCEEEEEecCCC
Confidence 9853 21 236888877 7755555554322 2345666654 3444433 33447888888643
No 268
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=87.39 E-value=2.4 Score=41.66 Aligned_cols=116 Identities=6% Similarity=-0.100 Sum_probs=55.2
Q ss_pred cceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCC
Q 012630 127 QKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG 206 (459)
Q Consensus 127 ~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g 206 (459)
..++++|..+...+.+...++....-......+.+.+.+.++|||+ +||....+..+... ...+.+.++|+ ..
T Consensus 231 ~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~-~lyV~~~~~~~~~~---~~~~~~~ViD~---~t 303 (368)
T 1mda_H 231 SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD-GIMILTVEHSRSCL---AAAENTSSVTA---SV 303 (368)
T ss_dssp SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT-EEEEEEEECSSCTT---SCEEEEEEEES---SS
T ss_pred CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC-EEEEEeccccCccc---ccCCCEEEEEC---CC
Confidence 4567777765443333332221100000001122233478999998 66654331201000 00112347776 32
Q ss_pred CCceEeccccceeccceeCCCCc-EEEEEeecCCccEEEEEEcCCCC
Q 012630 207 EEPEILHKLDLRFRGVSWCDDSL-ALVQETWFKTTQTRTWLISPGSK 252 (459)
Q Consensus 207 ~~~~~L~~~~~~~~~~~Ws~D~~-al~~~~~~~~~~~~ly~v~~~~~ 252 (459)
.+...-.....+-.++.+++||. +++...+.+ ..+.+||+++.
T Consensus 304 ~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~---~~VsVID~~t~ 347 (368)
T 1mda_H 304 GQTSGPISNGHDSDAIIAAQDGASDNYANSAGT---EVLDIYDAASD 347 (368)
T ss_dssp CCEEECCEEEEEECEEEECCSSSCEEEEEETTT---TEEEEEESSSC
T ss_pred CeEEEEEECCCCcceEEECCCCCEEEEEccCCC---CeEEEEECCCC
Confidence 23332223344567789999985 555443112 35899998764
No 269
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=87.29 E-value=0.71 Score=42.70 Aligned_cols=40 Identities=13% Similarity=0.300 Sum_probs=31.6
Q ss_pred ceEEEEE-ECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 399 QKELIKY-QRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 399 ~~E~i~y-ks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
..+.+++ ...+|.++..++|+|++++ .+ ++|+||++...-
T Consensus 21 ~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~--~~p~vv~lHG~~ 61 (283)
T 4b6g_A 21 SQQVWAHHAQTLQCEMKFAVYLPNNPE-NR--PLGVIYWLSGLT 61 (283)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECCCTT-CC--CEEEEEEECCTT
T ss_pred cEEEEEEechhhCCceEEEEEeCCCCC-CC--CCCEEEEEcCCC
Confidence 4555666 4458999999999999986 33 799999998753
No 270
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=87.19 E-value=9.3 Score=36.82 Aligned_cols=156 Identities=18% Similarity=0.204 Sum_probs=78.3
Q ss_pred hcceEEEcCCCceeecC------C-CceeeecccCCC---CCeEEEEEeccCcccccccCCCCcceEEEecCCcee---e
Q 012630 74 TTQLVLATLDGTVKEFG------P-PAIYTAVEPSPD---QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV---R 140 (459)
Q Consensus 74 ~sqL~~v~~~G~~~~l~------~-~~~~~~~~~SPD---G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~---~ 140 (459)
.+.|++++ +|+.+.+. . .....++.++|| +++|.+...... . .....|..++.+++.. +
T Consensus 50 ~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~-~------~~~~~v~r~~~~~~~~~~~~ 121 (352)
T 2ism_A 50 PGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAE-G------GLRNQVVRLRHLGERGVLDR 121 (352)
T ss_dssp TTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECT-T------SSEEEEEEEEECSSCEEEEE
T ss_pred CCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCC-C------CCccEEEEEEeCCCCcCceE
Confidence 36777777 66544321 1 233468999999 777766532110 0 0124577777765421 1
Q ss_pred e-eecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccc---cCCCCeEEeccCC-------CCCC---
Q 012630 141 Q-LCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVE---VSPRDIIYTQPAE-------PVEG--- 206 (459)
Q Consensus 141 ~-lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~---~~~~~~l~~~~~~-------pf~g--- 206 (459)
. ++..|... .....+..+.+.|||. ||++. -+.+..... ......|+.++.+ ||.+
T Consensus 122 ~l~~~~p~~~-------~~~h~~~~l~~~pdG~--Lyv~~-G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~ 191 (352)
T 2ism_A 122 VVLDGIPARP-------HGLHSGGRIAFGPDGM--LYVTT-GEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRG 191 (352)
T ss_dssp EEEEEECCCT-------TCCCCCCCEEECTTSC--EEEEC-CCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTT
T ss_pred EEEEeCCCCC-------CCCcCCceEEECCCCC--EEEEE-CCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCC
Confidence 2 22222100 1123456899999984 55542 233322110 1224578888760 2211
Q ss_pred CCceEeccccce-eccceeCC-CCcEEEEEeecCCc-----cEEEEEEcC
Q 012630 207 EEPEILHKLDLR-FRGVSWCD-DSLALVQETWFKTT-----QTRTWLISP 249 (459)
Q Consensus 207 ~~~~~L~~~~~~-~~~~~Ws~-D~~al~~~~~~~~~-----~~~ly~v~~ 249 (459)
.... ++....+ -.+++|++ ++..++.+... .+ ...+.++..
T Consensus 192 ~~~~-i~a~G~rnp~g~a~d~~~g~l~v~d~g~-~~~~~~~~dei~~i~~ 239 (352)
T 2ism_A 192 ARPE-VYSLGHRNPQGLAWHPKTGELFSSEHGP-SGEQGYGHDEVNLIVP 239 (352)
T ss_dssp SCTT-EEEECCSEECCCEECTTTCCEEEEEECC-------CCCEEEEECT
T ss_pred CCcc-EEEEcCCCcccEEEECCCCCEEEEEcCC-CCCCCCCCeEEEEecc
Confidence 1222 2222333 46789998 57777776532 22 345666654
No 271
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=86.64 E-value=10 Score=35.55 Aligned_cols=126 Identities=13% Similarity=0.068 Sum_probs=66.3
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEec-CCCce
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRA-DRPST 174 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~Wsp-Dg~~~ 174 (459)
..+.++|++..|++... ...++++|.+++.++.+.... ...+ ...+..+...+ ||.
T Consensus 83 ~gi~~~~~~g~l~v~d~-------------~~~i~~~d~~~g~~~~~~~~~--~~~~------~~~p~~i~~d~~~G~-- 139 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDC-------------YYHLSVVGSEGGHATQLATSV--DGVP------FKWLYAVTVDQRTGI-- 139 (322)
T ss_dssp EEEEEETTTTEEEEEET-------------TTEEEEECTTCEECEEEESEE--TTEE------CSCEEEEEECTTTCC--
T ss_pred ceEEEcCCCCcEEEEEC-------------CCCEEEEeCCCCEEEEecccC--CCCc------ccccceEEEecCCCE--
Confidence 46778883334555531 133778888877666554321 1001 12356788888 875
Q ss_pred EEEEEeccCCccc------cccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCc-EEEEEeecCCccEEEEEE
Q 012630 175 LYWVETQDGGAAK------VEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSL-ALVQETWFKTTQTRTWLI 247 (459)
Q Consensus 175 l~~~~~~d~g~~~------~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~-al~~~~~~~~~~~~ly~v 247 (459)
|+++......... .+......|+.++. .+++.+.+......-.+++|++|+. .++.+.. ..+|+++
T Consensus 140 l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~----~~~I~~~ 212 (322)
T 2fp8_A 140 VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---STKETTLLLKELHVPGGAEVSADSSFVLVAEFL----SHQIVKY 212 (322)
T ss_dssp EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET---TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG----GTEEEEE
T ss_pred EEEECCcccccccccceehcccCCCceEEEEeC---CCCEEEEeccCCccCcceEECCCCCEEEEEeCC----CCeEEEE
Confidence 5544321100000 00011246888877 5435444433222345689999974 5555432 2358888
Q ss_pred cCCC
Q 012630 248 SPGS 251 (459)
Q Consensus 248 ~~~~ 251 (459)
++++
T Consensus 213 ~~~~ 216 (322)
T 2fp8_A 213 WLEG 216 (322)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 8764
No 272
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=86.59 E-value=0.65 Score=44.43 Aligned_cols=41 Identities=15% Similarity=0.030 Sum_probs=34.6
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
.....+.++|++.||.+|+++++.|++ .+ +.|+||++..--
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~---~~--~~p~vv~~HG~g 118 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT---EG--KHPALIRFHGYS 118 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC---SS--CEEEEEEECCTT
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC---CC--CcCEEEEECCCC
Confidence 346789999999999999999999986 12 689999997654
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=86.25 E-value=9 Score=38.21 Aligned_cols=134 Identities=10% Similarity=0.113 Sum_probs=70.9
Q ss_pred cceEEEcC-CCceeecCCCc-eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCcee--eeeeccccccc
Q 012630 75 TQLVLATL-DGTVKEFGPPA-IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV--RQLCELPLVEN 150 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~~~-~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~--~~lt~~p~~~~ 150 (459)
..|+++++ +|+++.+.... ....+.++|||+ |+++.... . .....+..++..++.. ..+..
T Consensus 162 ~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~-~-------~~~~gv~~~~~~~~~~~~~~~~~------ 226 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQS-S-------DTNTGIYLFTRASGFTERLSLCN------ 226 (433)
T ss_dssp SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCS-C-------TTSEEEEEECGGGTTCCEEEEEE------
T ss_pred CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCC-C-------cccceEEEEECCCCeeccccccc------
Confidence 56777777 77776665432 346899999999 65553210 0 0112234444433221 11111
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc-eEeccccc--eeccceeCCC
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP-EILHKLDL--RFRGVSWCDD 227 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~-~~L~~~~~--~~~~~~Ws~D 227 (459)
-..+..+...|+.. .||++.. ....|+.++. ++++. +.+..... ...++++++|
T Consensus 227 --------~~~P~giavd~~~G-~lyv~d~-----------~~~~V~~~d~---~~g~~~~~~~~~~~~~~~~~ia~dpd 283 (433)
T 4hw6_A 227 --------ARGAKTCAVHPQNG-KIYYTRY-----------HHAMISSYDP---ATGTLTEEEVMMDTKGSNFHIVWHPT 283 (433)
T ss_dssp --------CSSBCCCEECTTTC-CEEECBT-----------TCSEEEEECT---TTCCEEEEEEECSCCSSCEEEEECTT
T ss_pred --------cCCCCEEEEeCCCC-eEEEEEC-----------CCCEEEEEEC---CCCeEEEEEeccCCCCCcccEEEeCC
Confidence 13455778888444 4665421 1346888877 53354 34432111 1224899999
Q ss_pred Cc-EEEEEeecCCccEEEEEEcCC
Q 012630 228 SL-ALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 228 ~~-al~~~~~~~~~~~~ly~v~~~ 250 (459)
+. +++.+. ...+|++++.+
T Consensus 284 G~~LYvad~----~~~~I~~~~~d 303 (433)
T 4hw6_A 284 GDWAYIIYN----GKHCIYRVDYN 303 (433)
T ss_dssp SSEEEEEET----TTTEEEEEEBC
T ss_pred CCEEEEEeC----CCCEEEEEeCC
Confidence 75 555543 23357887654
No 274
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=85.80 E-value=0.68 Score=44.89 Aligned_cols=42 Identities=12% Similarity=0.114 Sum_probs=33.0
Q ss_pred CCceEEEEEECC-CCcEEEEEEEccCCCCCCCCCCceEEEEEcC
Q 012630 397 TLQKELIKYQRK-DGVQLTAKLYLPTGYDPSKDGHLLCLFWAYP 439 (459)
Q Consensus 397 ~~~~E~i~yks~-DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp 439 (459)
.++.+.+++.|. -|.+.+-++|+|++|++. ..+||+|+....
T Consensus 9 ~~~v~~~~~~S~~l~~~r~~~VylP~~y~~~-~~~yPVlylldG 51 (331)
T 3gff_A 9 AVEYQSKRLESRLLKETREYVIALPEGYAQS-LEAYPVVYLLDG 51 (331)
T ss_dssp --CEEEEEEEETTTTEEEEEEEECCTTGGGS-CCCEEEEEESSH
T ss_pred CceEEEEEEEecCCCCeEEEEEEeCCCCCCC-CCCccEEEEecC
Confidence 457788888887 689999999999999862 238999987665
No 275
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=85.76 E-value=17 Score=33.58 Aligned_cols=45 Identities=18% Similarity=0.251 Sum_probs=32.6
Q ss_pred eeecCC-CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeee
Q 012630 86 VKEFGP-PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQL 142 (459)
Q Consensus 86 ~~~l~~-~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~l 142 (459)
.++|.. ....++++|+||++.|+++.+. +..|+.+|.+|+..+.+
T Consensus 19 ~~~l~g~~~~lSGla~~~~~~~L~aV~d~------------~~~I~~ld~~g~v~~~i 64 (255)
T 3qqz_A 19 GKEIAGITNNISSLTWSAQSNTLFSTINK------------PAAIVEMTTNGDLIRTI 64 (255)
T ss_dssp EEECTTCCSCEEEEEEETTTTEEEEEEET------------TEEEEEEETTCCEEEEE
T ss_pred ceECCCcccCcceeEEeCCCCEEEEEECC------------CCeEEEEeCCCCEEEEE
Confidence 344433 3457899999999998877653 35688899997776665
No 276
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=85.45 E-value=0.91 Score=41.08 Aligned_cols=41 Identities=10% Similarity=0.125 Sum_probs=29.4
Q ss_pred ceEEEEEECC-CCcEEEEEEEccCCCC----CCCCCCceEEEEEcCCc
Q 012630 399 QKELIKYQRK-DGVQLTAKLYLPTGYD----PSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 399 ~~E~i~yks~-DG~~l~g~L~lP~~yd----~~k~~kyP~Il~~Yp~e 441 (459)
..+.++|.+. +|.++.++||+|++++ +.+ ++|+||++...-
T Consensus 6 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~--~~p~vv~~HG~~ 51 (263)
T 2uz0_A 6 AVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECE--DIPVLYLLHGMS 51 (263)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECC---------C--CBCEEEEECCTT
T ss_pred eEeEEEEechhhCCceeEEEEeCCCccccCCcCC--CCCEEEEECCCC
Confidence 4667788654 7899999999999983 223 799999997754
No 277
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=85.41 E-value=15 Score=36.84 Aligned_cols=83 Identities=14% Similarity=0.155 Sum_probs=49.5
Q ss_pred cceeeeEEecCCCceEEEEEeccCCccc---------------------cc-cCCCCeEEeccCCCCCCCC---------
Q 012630 160 EGMRLISWRADRPSTLYWVETQDGGAAK---------------------VE-VSPRDIIYTQPAEPVEGEE--------- 208 (459)
Q Consensus 160 ~~~r~~~WspDg~~~l~~~~~~d~g~~~---------------------~~-~~~~~~l~~~~~~pf~g~~--------- 208 (459)
.....+.|.|||. ||++. -|.+... .. ...+..|+.++. +|+-
T Consensus 144 H~~~~l~f~pDG~--Lyv~~-Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~---dG~ip~~Npf~~~ 217 (454)
T 1cru_A 144 HQSGRLVIGPDQK--IYYTI-GDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNL---DGSIPKDNPSFNG 217 (454)
T ss_dssp CCEEEEEECTTSC--EEEEE-CCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECT---TSCCCTTCCEETT
T ss_pred CCCCeEeECCCCe--EEEEE-CCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeC---CCCCCCCCCCCCC
Confidence 4568899999986 55553 2332110 00 123568888887 6631
Q ss_pred -ceEeccccce-eccceeCCCCcEEEEEeecCCccEEEEEEcC
Q 012630 209 -PEILHKLDLR-FRGVSWCDDSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 209 -~~~L~~~~~~-~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
..+++....| -.+++|.++|..++.+... .....|.+|..
T Consensus 218 ~~~ei~a~G~RNp~gla~dp~G~L~~~d~g~-~~~dein~i~~ 259 (454)
T 1cru_A 218 VVSHIYTLGHRNPQGLAFTPNGKLLQSEQGP-NSDDEINLIVK 259 (454)
T ss_dssp EECSEEEBCCSEEEEEEECTTSCEEEEEECS-SSCEEEEECCT
T ss_pred CcceEEEECCCCcceEEECCCCCEEEEecCC-CCCeEEEEecC
Confidence 2234444444 4668999888878877642 35667777754
No 278
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=85.39 E-value=4.5 Score=39.24 Aligned_cols=124 Identities=12% Similarity=0.217 Sum_probs=68.1
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC---CC
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD---RP 172 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD---g~ 172 (459)
..+.|.|||+ |+++. + ...|++++.+|. ..+...+.. .....++..+.++|| +.
T Consensus 32 ~~ia~~pdG~-l~V~e-~------------~g~I~~~d~~G~--~~~~~~~v~-------~~g~~g~~gia~~pdf~~~g 88 (354)
T 3a9g_A 32 WSIAPLGGGR-YLVTE-R------------PGRLVLISPSGK--KLVASFDVA-------NVGEAGLLGLALHPEFPKKS 88 (354)
T ss_dssp EEEEEEETTE-EEEEE-T------------TTEEEEECSSCE--EEEEECCCC-------CSTTCSEEEEEECTTTTTSC
T ss_pred eEEEEcCCCe-EEEEe-C------------CCEEEEEeCCCc--eEeecccee-------ecCCCceeeEEeCCCCCcCC
Confidence 5889999997 54542 2 256888876664 444443310 111246778999998 55
Q ss_pred ceEEEEEec-cCCccccccCCCCeEEeccCCCCCCC-----CceEecc-cc----ceeccceeCCCCcEEEEEeecC---
Q 012630 173 STLYWVETQ-DGGAAKVEVSPRDIIYTQPAEPVEGE-----EPEILHK-LD----LRFRGVSWCDDSLALVQETWFK--- 238 (459)
Q Consensus 173 ~~l~~~~~~-d~g~~~~~~~~~~~l~~~~~~pf~g~-----~~~~L~~-~~----~~~~~~~Ws~D~~al~~~~~~~--- 238 (459)
.||..... ...+ .....|+.++. +++ +.+.|.. .+ .....+.|++||..++......
T Consensus 89 -~lyv~~~~~~~~~-----~~~~~v~r~~~---~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~ 159 (354)
T 3a9g_A 89 -WVYLYASYFAEGG-----HIRNRVIRGRL---DGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPR 159 (354)
T ss_dssp -EEEEEEEEECGGG-----CEEEEEEEEEE---CSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGG
T ss_pred -EEEEEEeccCCCC-----CcceEEEEEEE---CCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCc
Confidence 56655432 1110 01245666665 432 1333322 11 1125589999997666542211
Q ss_pred ------CccEEEEEEcCCC
Q 012630 239 ------TTQTRTWLISPGS 251 (459)
Q Consensus 239 ------~~~~~ly~v~~~~ 251 (459)
....+|+++++++
T Consensus 160 ~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 160 LAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp GGTCTTCCSSEEEEECTTS
T ss_pred cccCCCCCCeEEEEEcCCC
Confidence 1235799998863
No 279
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=85.26 E-value=12 Score=36.57 Aligned_cols=35 Identities=9% Similarity=-0.019 Sum_probs=19.9
Q ss_pred cceeccceeCCCCcEEEEEeecCCccEEEEEEcCC
Q 012630 216 DLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 216 ~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~ 250 (459)
......+.|++++..++..........++++++.+
T Consensus 407 ~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 407 GGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp TCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred CceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 33456688999987666544211223455555543
No 280
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=85.22 E-value=7.5 Score=36.29 Aligned_cols=127 Identities=10% Similarity=0.031 Sum_probs=65.9
Q ss_pred eEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeecccccccccc
Q 012630 77 LVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELPLVENIPI 153 (459)
Q Consensus 77 L~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p~~~~~P~ 153 (459)
|.++|+ +|++. .+ -+..+-..-.+++|++|..+.- ....++++|.+ ++.++++.-.
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw------------~~~~v~V~D~~Tl~~~~ti~~~-------- 135 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTW------------TEGLLFTWSGMPPQRERTTRYS-------- 135 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEES------------SSCEEEEEETTTTEEEEEEECS--------
T ss_pred EEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEc------------cCCEEEEEECCcCcEEEEEeCC--------
Confidence 888888 77544 33 2222223335678888866642 24778999976 4555555431
Q ss_pred cccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCce-Eecc--ccce---eccceeCCC
Q 012630 154 AYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPE-ILHK--LDLR---FRGVSWCDD 227 (459)
Q Consensus 154 ~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~-~L~~--~~~~---~~~~~Ws~D 227 (459)
..+..++ +|++ .|+.. ++ .+.|+.+|. ...+.. .+.- .+.. ...+.|. |
T Consensus 136 ------~eGwGLt--~Dg~-~L~vS---dG---------s~~l~~iDp---~T~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 136 ------GEGWGLC--YWNG-KLVRS---DG---------GTMLTFHEP---DGFALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp ------SCCCCEE--EETT-EEEEE---CS---------SSEEEEECT---TTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred ------CceeEEe--cCCC-EEEEE---CC---------CCEEEEEcC---CCCeEEEEEEeCCCCcccccccccEEe-C
Confidence 0112333 5666 55533 22 235777765 221222 2211 1111 1335677 6
Q ss_pred CcEEEEEeecCCccEEEEEEcCCCCC
Q 012630 228 SLALVQETWFKTTQTRTWLISPGSKD 253 (459)
Q Consensus 228 ~~al~~~~~~~~~~~~ly~v~~~~~~ 253 (459)
|.+++ ..|.. ..|.+||+++++
T Consensus 191 G~lya-nvw~s---~~I~vIDp~TG~ 212 (268)
T 3nok_A 191 GVIYA-NIWHS---SDVLEIDPATGT 212 (268)
T ss_dssp TEEEE-EETTC---SEEEEECTTTCB
T ss_pred CEEEE-EECCC---CeEEEEeCCCCc
Confidence 65443 33322 269999998764
No 281
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=84.70 E-value=7 Score=37.93 Aligned_cols=38 Identities=18% Similarity=0.268 Sum_probs=23.5
Q ss_pred eEEeccCCCCCCCCce-EeccccceeccceeCCCCcEEEEEe
Q 012630 195 IIYTQPAEPVEGEEPE-ILHKLDLRFRGVSWCDDSLALVQET 235 (459)
Q Consensus 195 ~l~~~~~~pf~g~~~~-~L~~~~~~~~~~~Ws~D~~al~~~~ 235 (459)
.|++++. ..++.. .+.........++|+|||..|+...
T Consensus 340 ~V~lwd~---~~~~~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 340 LIQLINT---YEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp EEEEEET---TCTTCCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEC---CCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 5667766 322333 3333444577799999997776554
No 282
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=84.57 E-value=22 Score=33.03 Aligned_cols=119 Identities=15% Similarity=0.174 Sum_probs=64.0
Q ss_pred ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEE
Q 012630 88 EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISW 167 (459)
Q Consensus 88 ~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~W 167 (459)
.|..+....++.|+|||+ |+++.. ....|+++|.+|+....+ .. ...+..+.+
T Consensus 27 ~~p~~~~pegia~~~~g~-lyv~d~------------~~~~I~~~d~~g~~~~~~-~~-------------~~~p~gia~ 79 (306)
T 2p4o_A 27 SFPVNTFLENLASAPDGT-IFVTNH------------EVGEIVSITPDGNQQIHA-TV-------------EGKVSGLAF 79 (306)
T ss_dssp EECTTCCEEEEEECTTSC-EEEEET------------TTTEEEEECTTCCEEEEE-EC-------------SSEEEEEEE
T ss_pred eCCCCCCcceEEECCCCC-EEEEeC------------CCCeEEEECCCCceEEEE-eC-------------CCCceeEEE
Confidence 343334456899999998 655531 236688999887654433 21 124567899
Q ss_pred ecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc-ce-eccceeCCCCcEEEEEeecCCccEEEE
Q 012630 168 RADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD-LR-FRGVSWCDDSLALVQETWFKTTQTRTW 245 (459)
Q Consensus 168 spDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~-~~-~~~~~Ws~D~~al~~~~~~~~~~~~ly 245 (459)
.+||. |+.+... . + +..|+.++. ..++.+.+.... .+ ..++...+++..++.+. ....||
T Consensus 80 ~~dG~--l~vad~~-~-~-------~~~v~~~d~---~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~----~~g~i~ 141 (306)
T 2p4o_A 80 TSNGD--LVATGWN-A-D-------SIPVVSLVK---SDGTVETLLTLPDAIFLNGITPLSDTQYLTADS----YRGAIW 141 (306)
T ss_dssp CTTSC--EEEEEEC-T-T-------SCEEEEEEC---TTSCEEEEEECTTCSCEEEEEESSSSEEEEEET----TTTEEE
T ss_pred cCCCc--EEEEecc-C-C-------cceEEEEcC---CCCeEEEEEeCCCccccCcccccCCCcEEEEEC----CCCeEE
Confidence 99987 4433211 0 0 124666654 233665554321 11 12232223455555432 223799
Q ss_pred EEcCCC
Q 012630 246 LISPGS 251 (459)
Q Consensus 246 ~v~~~~ 251 (459)
++++.+
T Consensus 142 ~~d~~~ 147 (306)
T 2p4o_A 142 LIDVVQ 147 (306)
T ss_dssp EEETTT
T ss_pred EEeCCC
Confidence 999864
No 283
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=84.41 E-value=19 Score=32.97 Aligned_cols=58 Identities=9% Similarity=0.025 Sum_probs=33.2
Q ss_pred hcceEEEcC-CCceee-cCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeee
Q 012630 74 TTQLVLATL-DGTVKE-FGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLC 143 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~~-l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt 143 (459)
.|+|..+|+ +|++.+ +.-+..+.....+++|++|..+.-+ ...++++|.+ .+.+.++.
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~------------~~~v~v~D~~tl~~~~ti~ 102 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR------------NHEGFVYDLATLTPRARFR 102 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------------SSEEEEEETTTTEEEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee------------CCEEEEEECCcCcEEEEEe
Confidence 456888998 887653 2223223334455678887666421 3667777765 34444443
No 284
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=84.39 E-value=0.26 Score=53.55 Aligned_cols=29 Identities=17% Similarity=0.328 Sum_probs=24.2
Q ss_pred ECCCCcE--EEEEEEccCCCCCCCCCCceEEEEEcC
Q 012630 406 QRKDGVQ--LTAKLYLPTGYDPSKDGHLLCLFWAYP 439 (459)
Q Consensus 406 ks~DG~~--l~g~L~lP~~yd~~k~~kyP~Il~~Yp 439 (459)
+.+||++ |.++||+|++- + |+|+||.+.|
T Consensus 179 ~~~DG~~d~L~a~l~~P~~~---~--k~PvIv~~~p 209 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKST---E--KLPVVMTASP 209 (763)
T ss_dssp TTCSSSCCEEEEEEEECCCS---S--CEEEEEEECS
T ss_pred cCCCCCeeeEEEEEEecCCC---C--cccEEEecCC
Confidence 5789999 99999999862 3 8999997744
No 285
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=84.21 E-value=0.79 Score=42.04 Aligned_cols=40 Identities=8% Similarity=0.031 Sum_probs=31.9
Q ss_pred CceEEEEE-ECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 398 LQKELIKY-QRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 398 ~~~E~i~y-ks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
...+.+++ ...+|.+++.++|+|++++ ++ ++|+||++...
T Consensus 13 g~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~--~~p~vv~lHG~ 53 (278)
T 3e4d_A 13 GMQGVFSHQSETLKSEMTFAVYVPPKAI-HE--PCPVVWYLSGL 53 (278)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECGGGG-TS--CEEEEEEECCT
T ss_pred CcEEEEEEeccccCCcceEEEEcCCCCC-CC--CCCEEEEEcCC
Confidence 35566666 4558999999999999886 33 79999999875
No 286
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=83.89 E-value=0.83 Score=41.85 Aligned_cols=41 Identities=12% Similarity=0.257 Sum_probs=32.0
Q ss_pred ceEEEEEE-CCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 399 QKELIKYQ-RKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 399 ~~E~i~yk-s~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
..+.+++. ..+|.++..++|+|+++++ + ++|+||++...-.
T Consensus 15 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~-~--~~p~vv~lHG~~~ 56 (282)
T 3fcx_A 15 LQKVFEHDSVELNCKMKFAVYLPPKAET-G--KCPALYWLSGLTC 56 (282)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGT-S--CEEEEEEECCTTC
T ss_pred cEEEEEEEchhcCCeeEEEEEcCCCCCC-C--CCCEEEEEcCCCC
Confidence 45555664 5589999999999998864 2 7999999988643
No 287
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=83.20 E-value=1.4 Score=39.09 Aligned_cols=38 Identities=16% Similarity=0.079 Sum_probs=31.3
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
.+.|.|+|+. ||.+|+++++.|++-+ +++|+||++..-
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~p~~~~----~~~p~vv~~HG~ 41 (241)
T 3f67_A 4 IIAGETSIPS-QGENMPAYHARPKNAD----GPLPIVIVVQEI 41 (241)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEEETTCC----SCEEEEEEECCT
T ss_pred ceeeeEEEec-CCcceEEEEecCCCCC----CCCCEEEEEcCc
Confidence 4678899999 9999999999998622 268999998753
No 288
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=82.94 E-value=1.7 Score=43.01 Aligned_cols=86 Identities=8% Similarity=-0.036 Sum_probs=53.5
Q ss_pred hhcceEEEcC-CCceeecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce---eeeeecccc-
Q 012630 73 TTTQLVLATL-DGTVKEFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF---VRQLCELPL- 147 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~---~~~lt~~p~- 147 (459)
..++|+++++ ++...++. ..+..++|||+| +++... ...+.+++.++++ .+.|...|.
T Consensus 144 ~dG~L~v~dl~~~~~~~~~--~~Vs~v~WSpkG--~~vg~~-------------dg~i~~~~~~~~~~~~k~~I~~Pp~~ 206 (388)
T 1xip_A 144 SVNDLSALDLRTKSTKQLA--QNVTSFDVTNSQ--LAVLLK-------------DRSFQSFAWRNGEMEKQFEFSLPSEL 206 (388)
T ss_dssp TTSEEEEEETTTCCEEEEE--ESEEEEEECSSE--EEEEET-------------TSCEEEEEEETTEEEEEEEECCCHHH
T ss_pred CCCCEEEEEccCCcccccc--CCceEEEEcCCc--eEEEEc-------------CCcEEEEcCCCccccccceecCCccc
Confidence 5678888888 56655543 346799999999 333321 3567788888877 444533221
Q ss_pred cccccccccccccceeeeEEecCCCceEEEEEe
Q 012630 148 VENIPIAYNSVREGMRLISWRADRPSTLYWVET 180 (459)
Q Consensus 148 ~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~ 180 (459)
.+.. +-...+-++.|.+++...+.|...
T Consensus 207 ~~~~-----~~~~~V~sI~wl~~~~flv~y~~~ 234 (388)
T 1xip_A 207 EELP-----VEEYSPLSVTILSPQDFLAVFGNV 234 (388)
T ss_dssp HTSC-----TTTSEEEEEEESSSSEEEEEEECC
T ss_pred cccc-----CCCeeEEEEEEecCCeEEEEEcCC
Confidence 1100 113466789999998866666543
No 289
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=82.64 E-value=1.8 Score=41.03 Aligned_cols=41 Identities=10% Similarity=0.156 Sum_probs=35.3
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
..+..+.+++...||.+|.+++|.|.+ + +.|+|||+...-|
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~----~--~~p~vv~~HGgG~ 96 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP----T--PAPVVVYCHAGGF 96 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC----S--SEEEEEEECCSTT
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC----C--CCcEEEEECCCcC
Confidence 456889999999999999999999975 2 6899999997654
No 290
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=82.37 E-value=18 Score=35.19 Aligned_cols=149 Identities=10% Similarity=0.018 Sum_probs=76.2
Q ss_pred hhcceEEEcCC---CceeecCCCc--------eeeecccCC--CCCeEEEEEeccCcccccccCCCCcceEE--EecCCc
Q 012630 73 TTTQLVLATLD---GTVKEFGPPA--------IYTAVEPSP--DQKYILITSIDRPYSFTVSYTKFPQKVQV--WTADGK 137 (459)
Q Consensus 73 ~~sqL~~v~~~---G~~~~l~~~~--------~~~~~~~SP--DG~~l~~~~~~~p~s~~v~~~~~~~~~~v--~d~~g~ 137 (459)
..++|+++|+. ++++.|.-.+ .-.+++.-+ ||+.-+|+.+... ....+.+ ++.+++
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~---------~~s~ielf~~d~~~~ 151 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG---------SSSTVEVFKFQEEEK 151 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST---------TCCEEEEEEEETTTT
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC---------CCCeEEEEEEECCCC
Confidence 57899999983 4555443211 223555544 6875566665532 2244444 456666
Q ss_pred eeeeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccc---c---ccCCCCeEEeccCCCCCCCCceE
Q 012630 138 FVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAK---V---EVSPRDIIYTQPAEPVEGEEPEI 211 (459)
Q Consensus 138 ~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~---~---~~~~~~~l~~~~~~pf~g~~~~~ 211 (459)
....+.... ..+ -..+.++...+||. +|.....--.++. . .......||.++. + +.+.
T Consensus 152 ~~~~~~~~~---g~~------~~~pND~~v~~~G~--fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~----~-~~~~ 215 (355)
T 3sre_A 152 SLLHLKTIR---HKL------LPSVNDIVAVGPEH--FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP----N-DVRV 215 (355)
T ss_dssp EEEEEEEEC---CTT------CSSEEEEEEEETTE--EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT----T-CCEE
T ss_pred EEEEEeccc---cCC------CCCCceEEEeCCCC--EEecCCcEeCCcccccchhhccCCccEEEEEEC----C-eEEE
Confidence 555454421 112 12455777888876 3322111001110 0 0012357888866 3 6666
Q ss_pred eccccceeccceeCCCCc-EEEEEeecCCccEEEEEEcCC
Q 012630 212 LHKLDLRFRGVSWCDDSL-ALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 212 L~~~~~~~~~~~Ws~D~~-al~~~~~~~~~~~~ly~v~~~ 250 (459)
+...-..-.+++||||+. .++.+.. ..+||+++.+
T Consensus 216 ~~~~l~~pNGia~spDg~~lYvadt~----~~~I~~~~~~ 251 (355)
T 3sre_A 216 VAEGFDFANGINISPDGKYVYIAELL----AHKIHVYEKH 251 (355)
T ss_dssp EEEEESSEEEEEECTTSSEEEEEEGG----GTEEEEEEEC
T ss_pred eecCCcccCcceECCCCCEEEEEeCC----CCeEEEEEEC
Confidence 654433457799999984 4445432 2346666543
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=81.47 E-value=44 Score=33.07 Aligned_cols=114 Identities=8% Similarity=-0.021 Sum_probs=64.6
Q ss_pred eecccCCC--CCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCc
Q 012630 96 TAVEPSPD--QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPS 173 (459)
Q Consensus 96 ~~~~~SPD--G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~ 173 (459)
..+.|+|| +..|.++- .. ..|+++|.+++.+..+... ...+..+.|++||.
T Consensus 142 ~gvavd~~s~~g~Lyv~D-~~------------~~I~~id~~~g~v~~~~~~-------------~~~P~giavd~dG~- 194 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVG-QR------------DAFRHVDFVNQYVDIKTTN-------------IGQCADVNFTLNGD- 194 (433)
T ss_dssp CEEEECTTTTTCEEEEEC-BT------------SCEEEEETTTTEEEEECCC-------------CSCEEEEEECTTCC-
T ss_pred ceEEEccccCCCEEEEEe-CC------------CCEEEEECCCCEEEEeecC-------------CCCccEEEECCCCC-
Confidence 37889995 55665552 21 5688999877777665431 23567899999988
Q ss_pred eEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc--eEeccccceeccceeCC-CCcEEEEEeecCCccEEEEEEcCC
Q 012630 174 TLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP--EILHKLDLRFRGVSWCD-DSLALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 174 ~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~--~~L~~~~~~~~~~~Ws~-D~~al~~~~~~~~~~~~ly~v~~~ 250 (459)
||++..... ..+..++.+.. .++-. ..+. ......+++.++ ++..++.+. ...+|++++++
T Consensus 195 -lyVad~~~~-------~~~~gv~~~~~---~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~----~~~~V~~~d~~ 258 (433)
T 4hw6_A 195 -MVVVDDQSS-------DTNTGIYLFTR---ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRY----HHAMISSYDPA 258 (433)
T ss_dssp -EEEEECCSC-------TTSEEEEEECG---GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBT----TCSEEEEECTT
T ss_pred -EEEEcCCCC-------cccceEEEEEC---CCCeecccccc-ccCCCCEEEEeCCCCeEEEEEC----CCCEEEEEECC
Confidence 665542111 11223444433 22111 2222 222345578888 576666543 23469999987
Q ss_pred CC
Q 012630 251 SK 252 (459)
Q Consensus 251 ~~ 252 (459)
++
T Consensus 259 ~g 260 (433)
T 4hw6_A 259 TG 260 (433)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 292
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.30 E-value=16 Score=35.32 Aligned_cols=124 Identities=15% Similarity=0.155 Sum_probs=66.3
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC---CC
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD---RP 172 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD---g~ 172 (459)
..+.+.|||+ |+++. + -..+|++++.+++....+...|. -+..-..+.-.+.++|| ..
T Consensus 35 ~~ia~~pdG~-llVte-r-----------~~G~I~~v~~~~g~~~~v~~~~~------v~~~g~~GllGia~~Pdf~~~g 95 (347)
T 3das_A 35 WGLAPLPGGD-LLVSS-R-----------DEATITRVDAKTGRKTELGEVPG------VSPSGEGGLLGIALSPDYASDH 95 (347)
T ss_dssp EEEEECTTSC-EEEEE-T-----------TTCEEEEECTTTCCEEEEEECTT------CCCBTTBSEEEEEECTTHHHHC
T ss_pred eEEEEcCCCc-EEEEE-e-----------cCCEEEEEECCCCcEeeecccCc------eeecCCCCceeeEeccccccCC
Confidence 4899999997 54553 1 13678888766555555544321 11122346678999996 23
Q ss_pred ceEEEEEeccCCccccccCCCCeEEeccCCCCCC--------CCceEecc-cc--ce--eccceeCCCCcEEEEEeec--
Q 012630 173 STLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEG--------EEPEILHK-LD--LR--FRGVSWCDDSLALVQETWF-- 237 (459)
Q Consensus 173 ~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g--------~~~~~L~~-~~--~~--~~~~~Ws~D~~al~~~~~~-- 237 (459)
.||...+... .+.|+.+.. ++ .+.+.|.. .+ .. ...+.|++||..++.....
T Consensus 96 -~lYv~yt~~~---------~~~v~R~~~---~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~ 162 (347)
T 3das_A 96 -MVYAYFTSAS---------DNRIVRMLY---DEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGD 162 (347)
T ss_dssp -EEEEEEECSS---------SEEEEEEEB---CTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTC
T ss_pred -EEEEEEecCC---------CCEEEEEEe---CCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCC
Confidence 4554332111 224555543 22 12344332 11 12 2448999999766664210
Q ss_pred -------CCccEEEEEEcCCC
Q 012630 238 -------KTTQTRTWLISPGS 251 (459)
Q Consensus 238 -------~~~~~~ly~v~~~~ 251 (459)
+....+|++|++++
T Consensus 163 ~~~~qd~~~~~G~IlRi~~dG 183 (347)
T 3das_A 163 TGLSQDRKSLGGKILRMTPDG 183 (347)
T ss_dssp GGGTTCTTCSTTCEEEECTTS
T ss_pred CccccCCCCCCCEEEEEeCCC
Confidence 12356788888763
No 293
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=81.02 E-value=1.5 Score=43.49 Aligned_cols=42 Identities=2% Similarity=-0.114 Sum_probs=31.5
Q ss_pred CCceEEEEEECC-CCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 397 TLQKELIKYQRK-DGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 397 ~~~~E~i~yks~-DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
.++.+.++|.|. .|.++..++|+|++|+ ++ +||+|+++....
T Consensus 165 ~G~v~~~~~~S~~~g~~~~~~vy~P~~~~-~~--~~PvlvllHG~~ 207 (403)
T 3c8d_A 165 EIPAKEIIWKSERLKNSRRVWIFTTGDVT-AE--ERPLAVLLDGEF 207 (403)
T ss_dssp SSCCEEEEEEETTTTEEEEEEEEEC------C--CCCEEEESSHHH
T ss_pred CCceEEEEEEccccCCcEEEEEEeCCCCC-CC--CCCEEEEeCCHH
Confidence 467889999876 8899999999999985 33 799999988754
No 294
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=80.82 E-value=2.2 Score=41.49 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=31.9
Q ss_pred cCCceEEEEEECCCCcEEEEEEEc-cCCCC------------------CCCCCCceEEEEEcCCcc
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYL-PTGYD------------------PSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~l-P~~yd------------------~~k~~kyP~Il~~Yp~e~ 442 (459)
..+..+.|++.+.|| |...+|+ |.+.+ +...+++|+|||++..-|
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~ 123 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSF 123 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTT
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCcc
Confidence 457889999999999 7777887 97641 012237999999999655
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=80.42 E-value=15 Score=37.42 Aligned_cols=137 Identities=6% Similarity=-0.035 Sum_probs=73.4
Q ss_pred cceEEEcC-CCceeecCCCc-----eeeeccc-------CCCCCeEEEEEeccCcccccccCCCCcceEEEecCC-cee-
Q 012630 75 TQLVLATL-DGTVKEFGPPA-----IYTAVEP-------SPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADG-KFV- 139 (459)
Q Consensus 75 sqL~~v~~-~G~~~~l~~~~-----~~~~~~~-------SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g-~~~- 139 (459)
.+|+++|+ ++.+..|...+ ....+.| ++||++|++.....- . . .....+++++.+. +..
T Consensus 162 ~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~-~--~---~~~~~V~~i~r~~~G~~~ 235 (496)
T 3kya_A 162 KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG-K--G---DESPSVYIIKRNADGTFD 235 (496)
T ss_dssp EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT-T--G---GGEEEEEEEECCTTSCCS
T ss_pred CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC-C--c---ccCceEEEEecCCCCcee
Confidence 46778887 66666554322 2457889 999998877642210 0 0 1123466665432 121
Q ss_pred -----eeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCC-------CC
Q 012630 140 -----RQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVE-------GE 207 (459)
Q Consensus 140 -----~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~-------g~ 207 (459)
+.+.. -.++..+.-.|++. .||++.. ..+.|+.++. + ++
T Consensus 236 ~~~~~~~v~~--------------~~~p~giavdp~~g-~LYvtd~-----------~~g~V~r~d~---~~~~~~~~tg 286 (496)
T 3kya_A 236 DRSDIQLIAA--------------YKQCNGATIHPING-ELYFNSY-----------EKGQVFRLDL---VDYFKTIKNG 286 (496)
T ss_dssp TTSCEEEEEE--------------ESCCCCEEECTTTC-CEEEEET-----------TTTEEEEECH---HHHHHHHHTT
T ss_pred ecccceeecc--------------CCCceEEEEcCCCC-eEEEEEC-----------CCCEEEEEec---ccccccccCc
Confidence 12211 12445667788766 6776642 1346777766 3 22
Q ss_pred Cc------------eEecccc--ceeccceeCCCCc-EEEEEeecCCccEEEEEEcCC
Q 012630 208 EP------------EILHKLD--LRFRGVSWCDDSL-ALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 208 ~~------------~~L~~~~--~~~~~~~Ws~D~~-al~~~~~~~~~~~~ly~v~~~ 250 (459)
.. ..+.... ....+++|+++|. +++.+. .+.+|++++.+
T Consensus 287 ~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~----~~h~I~kid~d 340 (496)
T 3kya_A 287 GSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI----NNHYFMRSDYD 340 (496)
T ss_dssp CCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET----TTTEEEEEEEE
T ss_pred eeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC----CCCEEEEEecC
Confidence 22 1332221 1234689999985 555543 33468887654
No 296
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=80.21 E-value=12 Score=36.10 Aligned_cols=158 Identities=9% Similarity=0.016 Sum_probs=78.4
Q ss_pred hhcceEEEcCCCcee-ecC-------C-CceeeecccCCC---CCeEEEEEeccCcccccccCCCCcceEEEecCCc---
Q 012630 73 TTTQLVLATLDGTVK-EFG-------P-PAIYTAVEPSPD---QKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK--- 137 (459)
Q Consensus 73 ~~sqL~~v~~~G~~~-~l~-------~-~~~~~~~~~SPD---G~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~--- 137 (459)
..++|++++.+|... .+. . .+...++.++|| +.+|.+........ ......|..++.+++
T Consensus 37 ~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~-----g~~~~~v~r~~~~~~~~~ 111 (353)
T 2g8s_A 37 RGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD-----GKAGTAVGYGRLSDDLSK 111 (353)
T ss_dssp TTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS-----SCEEEEEEEEEECTTSSB
T ss_pred CCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC-----CCceeEEEEEEECCCCCC
Confidence 456788887655432 121 1 123368999998 77776553221000 000245666665432
Q ss_pred --eeeee-ecccccccccccccccccceeeeEEecCCCceEEEEEeccCCcccc---ccCCCCeEEeccCCCCCCCC---
Q 012630 138 --FVRQL-CELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKV---EVSPRDIIYTQPAEPVEGEE--- 208 (459)
Q Consensus 138 --~~~~l-t~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~---~~~~~~~l~~~~~~pf~g~~--- 208 (459)
..+.| +..|... .....++.+.|.||| .||++.. +.+.... ....+..|+.++. +|.-
T Consensus 112 ~~~~~~i~~~~p~~~-------~~~h~~~~l~~~pdG--~Lyv~~G-d~~~~~~~q~~~~~~g~I~ri~~---dG~~p~~ 178 (353)
T 2g8s_A 112 VTDFRTVFRQMPKLS-------TGNHFGGRLVFDGKG--YLFIALG-ENNQRPTAQDLDKLQGKLVRLTD---QGEIPDD 178 (353)
T ss_dssp EEEEEEEEECSSCCB-------SSSCCCCCEEECSSS--EEEEEEC-CTTCGGGGGCTTSCTTEEEEEET---TSCCCTT
T ss_pred CCceEEEEEECCCCC-------CCcccCccEEECCCC--cEEEEEC-CCCCCCccCCCCCCCeEEEEECC---CCCCCCC
Confidence 11212 2222100 112235679999998 4665542 2222110 0123457888876 5420
Q ss_pred ---------ceEeccccce-eccceeCC-CCcEEEEEeecCCccEEEEEEcC
Q 012630 209 ---------PEILHKLDLR-FRGVSWCD-DSLALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 209 ---------~~~L~~~~~~-~~~~~Ws~-D~~al~~~~~~~~~~~~ly~v~~ 249 (459)
..+++....+ -.+++|.+ +|..++.+... ....+|.+|..
T Consensus 179 npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~-~~~dei~~i~~ 229 (353)
T 2g8s_A 179 NPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP-RGGDEINIPQK 229 (353)
T ss_dssp CTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS-BSCEEEECCCT
T ss_pred CCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC-CCCcEEeEecc
Confidence 2233333333 46689998 57777776532 23556777654
No 297
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=80.01 E-value=2.4 Score=39.64 Aligned_cols=40 Identities=15% Similarity=0.265 Sum_probs=33.7
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
..++.+.+++++.|| +|.+++|.|++.. + +.|+||++...
T Consensus 44 ~~~~~~~~~i~~~~g-~l~~~~~~P~~~~--~--~~p~vv~~HGG 83 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR-TLKVRMYRPEGVE--P--PYPALVYYHGG 83 (310)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECTTCC--S--SEEEEEEECCS
T ss_pred CcceEEEEEeccCCC-eEEEEEEecCCCC--C--CCCEEEEECCC
Confidence 356889999999999 9999999998652 2 68999999984
No 298
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=79.89 E-value=33 Score=30.68 Aligned_cols=130 Identities=17% Similarity=0.184 Sum_probs=72.0
Q ss_pred hcceEEEcCCCceeecCC---CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccc
Q 012630 74 TTQLVLATLDGTVKEFGP---PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVEN 150 (459)
Q Consensus 74 ~sqL~~v~~~G~~~~l~~---~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~ 150 (459)
...|++++..|+.+.+.. ......+.++|||+ |.+... ....++++|.+|.... +.. +.
T Consensus 77 ~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------------~~~~i~~~d~~g~~~~-~~~-~~--- 138 (299)
T 2z2n_A 77 ANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGD-IWFTEM------------NGNRIGRITDDGKIRE-YEL-PN--- 138 (299)
T ss_dssp TTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSC-EEEEET------------TTTEEEEECTTCCEEE-EEC-SS---
T ss_pred CCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCC-EEEEec------------CCceEEEECCCCCEEE-ecC-CC---
Confidence 346888887666655432 23446788899986 444431 1356788888554332 211 10
Q ss_pred ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEec--cccceeccceeCCCC
Q 012630 151 IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILH--KLDLRFRGVSWCDDS 228 (459)
Q Consensus 151 ~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~--~~~~~~~~~~Ws~D~ 228 (459)
....+..+.+.+||. |+++.. ....|+.++. +| +...+. .......++..+++|
T Consensus 139 -------~~~~~~~i~~~~~g~--l~v~~~-----------~~~~i~~~~~---~g-~~~~~~~~~~~~~~~~i~~~~~g 194 (299)
T 2z2n_A 139 -------KGSYPSFITLGSDNA--LWFTEN-----------QNNAIGRITE---SG-DITEFKIPTPASGPVGITKGNDD 194 (299)
T ss_dssp -------TTCCEEEEEECTTSC--EEEEET-----------TTTEEEEECT---TC-CEEEEECSSTTCCEEEEEECTTS
T ss_pred -------CCCCCceEEEcCCCC--EEEEeC-----------CCCEEEEEcC---CC-cEEEeeCCCCCCcceeEEECCCC
Confidence 123466888888875 443321 1235777766 55 554431 112224456777887
Q ss_pred cEEEEEeecCCccEEEEEEcC
Q 012630 229 LALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 229 ~al~~~~~~~~~~~~ly~v~~ 249 (459)
..++.... ...++++++
T Consensus 195 ~l~v~~~~----~~~i~~~~~ 211 (299)
T 2z2n_A 195 ALWFVEII----GNKIGRITT 211 (299)
T ss_dssp SEEEEETT----TTEEEEECT
T ss_pred CEEEEccC----CceEEEECC
Confidence 66665421 235888887
No 299
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=79.07 E-value=2.2 Score=44.73 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=31.9
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEE--cCCc
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWA--YPGE 441 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~--Yp~e 441 (459)
...|.|+++.+||.+|++++++|.+ .+ ++|+||.+ |.+.
T Consensus 7 ~~~~~v~i~~~DG~~L~~~~~~P~~---~~--~~P~vv~~~~~g~~ 47 (587)
T 3i2k_A 7 SVASNVMVPMRDGVRLAVDLYRPDA---DG--PVPVLLVRNPYDKF 47 (587)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEECC---SS--CEEEEEEEESSCTT
T ss_pred EEEEEEEEECCCCCEEEEEEEECCC---CC--CeeEEEEECCcCCC
Confidence 3567899999999999999999975 12 79999987 5554
No 300
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=79.05 E-value=1.7 Score=41.47 Aligned_cols=43 Identities=12% Similarity=0.260 Sum_probs=32.9
Q ss_pred CCceEEEEEECC-CCcEEEEEEEccCCCCCC---CCCCceEEEEEcC
Q 012630 397 TLQKELIKYQRK-DGVQLTAKLYLPTGYDPS---KDGHLLCLFWAYP 439 (459)
Q Consensus 397 ~~~~E~i~yks~-DG~~l~g~L~lP~~yd~~---k~~kyP~Il~~Yp 439 (459)
.++...++|.|. =|.++.-.+|||++|+.. +++|||+|.+.-.
T Consensus 11 gG~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG 57 (299)
T 4fol_A 11 GGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSG 57 (299)
T ss_dssp TEEEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECC
T ss_pred CCEEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECC
Confidence 356778888876 889999999999999632 2348999998665
No 301
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=78.78 E-value=1.7 Score=42.78 Aligned_cols=45 Identities=24% Similarity=0.344 Sum_probs=35.0
Q ss_pred CCceEEEEEECCC--C--cEEEEEEEccCCCCCCCCCCceEEEEEcCCccC
Q 012630 397 TLQKELIKYQRKD--G--VQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEFR 443 (459)
Q Consensus 397 ~~~~E~i~yks~D--G--~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~~ 443 (459)
.+....|.|++.| | ..++|+|++|.+..+. +++|+||++..-...
T Consensus 43 ~v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~--~~~P~vv~~HG~~~~ 91 (397)
T 3h2g_A 43 NVRVAEFTYATIGVEGEPATASGVLLIPGGERCS--GPYPLLGWGHPTEAL 91 (397)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEECTTCC--SCEEEEEEECCCCCB
T ss_pred CeEEEEEEEEecCCCCCeEEEEEEEEeCCCCCCC--CCCcEEEEeCCCcCC
Confidence 4678889998775 5 4699999999887543 379999999886543
No 302
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=78.56 E-value=2.7 Score=39.95 Aligned_cols=80 Identities=13% Similarity=0.066 Sum_probs=42.7
Q ss_pred EEEEEeecCCCCcceEEEECCCcceeecccccC--CCCC---CcCCceEEEEEECCCCcEEEEEEEccCCC-CCCCCCCc
Q 012630 358 KILTSKESKTEITQYWIQSWPHKKCRQITDFPH--PYPL---LSTLQKELIKYQRKDGVQLTAKLYLPTGY-DPSKDGHL 431 (459)
Q Consensus 358 ~i~~~~~s~~~P~ely~~~~~~g~~~~LT~~~~--~~~~---~~~~~~E~i~yks~DG~~l~g~L~lP~~y-d~~k~~ky 431 (459)
.+.+...+...|...+.+.. +|+..++..... +.+. ...+..+.|.|.+ |..|...||+|++. +++ +++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~-~g~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~P~~~~~~~--~~~ 83 (338)
T 2o7r_A 9 TGSSDPNTNLLKYLPIVLNP-DRTITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFLPRHALYNS--AKL 83 (338)
T ss_dssp ---------CTTTCSCEECT-TSCEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEEEGGGGGSS--CCE
T ss_pred ceeeccCcccccccceEECC-CCeEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEeCCCCCcCC--CCc
Confidence 45554444444544444453 566555432111 1111 2346788899987 45578889999864 322 379
Q ss_pred eEEEEEcCCcc
Q 012630 432 LCLFWAYPGEF 442 (459)
Q Consensus 432 P~Il~~Yp~e~ 442 (459)
|+||+++..-|
T Consensus 84 p~vv~~HGgg~ 94 (338)
T 2o7r_A 84 PLVVYFHGGGF 94 (338)
T ss_dssp EEEEEECCSTT
T ss_pred eEEEEEcCCcC
Confidence 99999998654
No 303
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=76.60 E-value=3.6 Score=35.74 Aligned_cols=38 Identities=13% Similarity=0.109 Sum_probs=31.2
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcC
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYP 439 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp 439 (459)
...|.++++..|| +|.++++.|.+-.+ ++.|+||++.+
T Consensus 8 ~~~~~~~~~~~~g-~~~~~~~~p~~~~~---~~~~~vv~~HG 45 (220)
T 2fuk_A 8 TESAALTLDGPVG-PLDVAVDLPEPDVA---VQPVTAIVCHP 45 (220)
T ss_dssp SSCEEEEEEETTE-EEEEEEECCCTTSC---CCSEEEEEECS
T ss_pred ccceEEEEeCCCC-eEEEEEEeCCCCCc---cccCEEEEECC
Confidence 4678999999999 99999999976211 25899999987
No 304
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=75.56 E-value=20 Score=35.94 Aligned_cols=118 Identities=18% Similarity=0.182 Sum_probs=59.1
Q ss_pred eecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecC---CC
Q 012630 96 TAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRAD---RP 172 (459)
Q Consensus 96 ~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspD---g~ 172 (459)
.++.|.|||+ |+++.. ...+|++++..++....+...+..-..| ....|.-.+.|+|| ..
T Consensus 30 ~~~a~~pdG~-l~V~e~------------~gg~I~~~~~~~g~~~~~~~~~~~~~~~----~g~~Gllgia~~Pdf~~~g 92 (454)
T 1cru_A 30 HALLWGPDNQ-IWLTER------------ATGKILRVNPESGSVKTVFQVPEIVNDA----DGQNGLLGFAFHPDFKNNP 92 (454)
T ss_dssp EEEEECTTSC-EEEEET------------TTCEEEEECTTTCCEEEEEECTTCCCCT----TSSCSEEEEEECTTTTTSC
T ss_pred eEEEEcCCCc-EEEEEc------------CCCEEEEEECCCCcEeEEecCCcccccc----CCCCceeEEEECCCcCcCC
Confidence 5899999997 444431 1235788876544444444432110001 12345668999997 55
Q ss_pred ceEEEEEeccCC-ccccccCCCCeEEeccCCCCCCC-----CceEecc-cc----ceeccceeCCCCcEEEEE
Q 012630 173 STLYWVETQDGG-AAKVEVSPRDIIYTQPAEPVEGE-----EPEILHK-LD----LRFRGVSWCDDSLALVQE 234 (459)
Q Consensus 173 ~~l~~~~~~d~g-~~~~~~~~~~~l~~~~~~pf~g~-----~~~~L~~-~~----~~~~~~~Ws~D~~al~~~ 234 (459)
.||+..+.... ...........|+.++. +++ ..+.|.. .+ .....+.|++||..++..
T Consensus 93 -~lYv~~s~~~~~~~~~~~~~~~~v~r~~~---~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~ 161 (454)
T 1cru_A 93 -YIYISGTFKNPKSTDKELPNQTIIRRYTY---NKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTI 161 (454)
T ss_dssp -EEEEEEEEECTTC--CCSCEEEEEEEEEE---ETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEE
T ss_pred -EEEEEEeccccCCCccccccccEEEEEEE---CCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEE
Confidence 67666543110 00000001235666554 211 2333432 11 123558999999776654
No 305
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=75.35 E-value=3.8 Score=35.42 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=29.7
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
...|.++++. ||.+|.++++.|.+ +.|+||++...-
T Consensus 10 ~~~~~~~~~~-~g~~l~~~~~~p~~-------~~p~vv~~hG~~ 45 (223)
T 2o2g_A 10 PQEYAVSVSV-GEVKLKGNLVIPNG-------ATGIVLFAHGSG 45 (223)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECCTT-------CCEEEEEECCTT
T ss_pred ceeeEEEEec-CCeEEEEEEecCCC-------CceEEEEecCCC
Confidence 4678899987 99999999999964 469999987654
No 306
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=74.82 E-value=1.5 Score=41.01 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=30.7
Q ss_pred ceEEEEEE---CCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 399 QKELIKYQ---RKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 399 ~~E~i~yk---s~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
....++|+ ..||.+|++++|+|.+++ + +.|+||++...-.
T Consensus 23 g~~~~~~~~~~~~~~~~l~~~~~~P~~~~--~--~~p~vv~lHG~~~ 65 (304)
T 3d0k_A 23 GRNAIPYLDDDRNADRPFTLNTYRPYGYT--P--DRPVVVVQHGVLR 65 (304)
T ss_dssp EEEEEEECC---CTTCCEEEEEEECTTCC--T--TSCEEEEECCTTC
T ss_pred CCceEEecccCCCCCceEEEEEEeCCCCC--C--CCcEEEEeCCCCC
Confidence 34457887 789999999999998764 2 5799999887543
No 307
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=74.66 E-value=3.6 Score=38.51 Aligned_cols=40 Identities=20% Similarity=0.347 Sum_probs=33.3
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
.....|.++++..|| +|.+++|.|.+ ++ +.|+||++...-
T Consensus 47 ~~~~~~~~~i~~~~g-~~~~~~~~P~~---~~--~~p~vv~~HGgg 86 (313)
T 2wir_A 47 PIHRVEDITIPGRGG-PIRARVYRPRD---GE--RLPAVVYYHGGG 86 (313)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECSC---CS--SEEEEEEECCST
T ss_pred CCceEEEEEeeCCCC-cEEEEEEecCC---CC--CccEEEEECCCc
Confidence 346788999999999 99999999975 22 689999999854
No 308
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=73.45 E-value=3.1 Score=37.42 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=27.4
Q ss_pred ceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcC
Q 012630 399 QKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYP 439 (459)
Q Consensus 399 ~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp 439 (459)
+++.+.+++.|| +|.++++.|.+ + +.|+||++.+
T Consensus 22 e~~~~~~~~~~g-~l~~~~~~p~~----~--~~p~vv~~HG 55 (249)
T 2i3d_A 22 HMPEVIFNGPAG-RLEGRYQPSKE----K--SAPIAIILHP 55 (249)
T ss_dssp --CEEEEEETTE-EEEEEEECCSS----T--TCCEEEEECC
T ss_pred ceeEEEEECCCc-eEEEEEEcCCC----C--CCCEEEEECC
Confidence 333999999999 99999999954 3 5799999986
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=73.28 E-value=67 Score=30.81 Aligned_cols=156 Identities=7% Similarity=-0.009 Sum_probs=78.2
Q ss_pred hhcceEEEcC-CCceeecCCCc---------eeeeccc---CCCCCeEEEEEecc-CcccccccCCCCcceEEEecC---
Q 012630 73 TTTQLVLATL-DGTVKEFGPPA---------IYTAVEP---SPDQKYILITSIDR-PYSFTVSYTKFPQKVQVWTAD--- 135 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~~~---------~~~~~~~---SPDG~~l~~~~~~~-p~s~~v~~~~~~~~~~v~d~~--- 135 (459)
..+.|.+++. +|....+.-++ ..+++.| -|+|+. ++++... +|...---......+..+|+.
T Consensus 33 ~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL-~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~ 111 (334)
T 2p9w_A 33 YKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRL-FAVMKNAKSFNFADQSSHGASSFHSFNLPLSE 111 (334)
T ss_dssp TTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEE-EEEEEETTTTCTTSCCSSSCCEEEEEESSCCT
T ss_pred cCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcE-EEEEcccccccccccccCCCCEEEEEcCCcCC
Confidence 4578888888 46544442222 2368899 588554 4444321 333210001124667888988
Q ss_pred Cceeeeeecccc-ccc-ccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCC-CeEEeccCCCCCCCCceE-
Q 012630 136 GKFVRQLCELPL-VEN-IPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPR-DIIYTQPAEPVEGEEPEI- 211 (459)
Q Consensus 136 g~~~~~lt~~p~-~~~-~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~-~~l~~~~~~pf~g~~~~~- 211 (459)
.++.....+++. .+. .++. .....+..++.--++|.+.+ +.+ .. ..|+.++. +| +...
T Consensus 112 tg~~~~~~dL~~~~~~~~~~~-g~~~~~~nDvavD~~GnaYV--t~s-----------~~~~~I~rV~p---dG-~~~~~ 173 (334)
T 2p9w_A 112 NSKPVWSVNFEKVQDEFEKKA-GKRPFGVVQSAQDRDGNSYV--AFA-----------LGMPAIARVSA---DG-KTVST 173 (334)
T ss_dssp TCCCSEEEESHHHHHHHHHHH-SSCCEEEEEEEECTTSCEEE--EEE-----------ESSCEEEEECT---TS-CCEEE
T ss_pred CCCEEEEecCccccccccccc-cccccCCceeEECCCCCEEE--eCC-----------CCCCeEEEEeC---CC-CEEee
Confidence 344444444321 110 0000 00112345667777776222 121 12 56888888 76 4333
Q ss_pred ec-cc-----cceeccceeCCCCcEEEEEeecCCccEEEEEEcCCC
Q 012630 212 LH-KL-----DLRFRGVSWCDDSLALVQETWFKTTQTRTWLISPGS 251 (459)
Q Consensus 212 L~-~~-----~~~~~~~~Ws~D~~al~~~~~~~~~~~~ly~v~~~~ 251 (459)
+. .. .....+|++.|||..|+... + ..+|+.+++..
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~---~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFG---G-PRALTAFDVSK 215 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEES---S-SSSEEEEECSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEc---C-CCeEEEEcCCC
Confidence 21 11 11256789999985555433 2 23589998763
No 310
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=73.17 E-value=4.6 Score=38.36 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=33.7
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
..+..+.+++...|| +|.+++|.|.+ . + +.|+|||++..-|
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~-~--~--~~p~vv~~HGGg~ 101 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKT-Q--G--PYGVLVYYHGGGF 101 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSS-C--S--CCCEEEEECCSTT
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCC-C--C--CCcEEEEECCCcc
Confidence 456889999999998 99999999976 2 2 6899999998543
No 311
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=73.04 E-value=70 Score=30.94 Aligned_cols=51 Identities=10% Similarity=0.086 Sum_probs=33.1
Q ss_pred hcceEEEcC-CCcee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCce
Q 012630 74 TTQLVLATL-DGTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKF 138 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~ 138 (459)
.+.|.+.++ +|+.. .+. ..+.+..++|+||+ +|+..+ ....+.+||+..+.
T Consensus 141 dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s-------------~dg~i~vwd~~~~~ 194 (464)
T 3v7d_B 141 DKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGS-------------TDRTVRVWDIKKGC 194 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEE-------------TTSCEEEEETTTTE
T ss_pred CCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEe-------------CCCCEEEEECCCCc
Confidence 356777777 66433 343 35567899999999 554443 23678999987443
No 312
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=72.93 E-value=3.7 Score=38.74 Aligned_cols=43 Identities=19% Similarity=0.366 Sum_probs=35.3
Q ss_pred cCCceEEEEEECCCCc-EEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 396 STLQKELIKYQRKDGV-QLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~-~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
..++.|.+++++.||. +|.+++|.|.+- .++.|+||+++..-|
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~----~~~~p~vv~~HGgg~ 90 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT----AGPVPVLLWIHGGGF 90 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC----CSCEEEEEEECCSTT
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC----CCCCcEEEEECCCcc
Confidence 4568899999999998 899999999752 126899999998654
No 313
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=72.32 E-value=5.7 Score=38.32 Aligned_cols=43 Identities=19% Similarity=0.314 Sum_probs=35.0
Q ss_pred CCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCccC
Q 012630 397 TLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEFR 443 (459)
Q Consensus 397 ~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~~ 443 (459)
.+..+.++++..||..|.+++|.|.+-. + ++|+|||++..-|.
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~~--~--~~p~vv~iHGgg~~ 121 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGVE--G--VLPGLVYTHGGGMT 121 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTCC--S--CEEEEEEECCSTTT
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCCC--C--CCeEEEEEcCCccc
Confidence 3567888999999999999999997632 2 68999999996543
No 314
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=71.50 E-value=3.9 Score=38.64 Aligned_cols=38 Identities=21% Similarity=0.387 Sum_probs=31.3
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
...|.+++++.|| +|.++||+|.+ . ..|+|||++..-|
T Consensus 61 ~~~~~~~~~~~~g-~i~~~~~~p~~----~--~~p~vv~~HGgg~ 98 (326)
T 3ga7_A 61 MTTRTCAVPTPYG-DVTTRLYSPQP----T--SQATLYYLHGGGF 98 (326)
T ss_dssp CEEEEEEECCTTS-CEEEEEEESSS----S--CSCEEEEECCSTT
T ss_pred cceEEEEeecCCC-CeEEEEEeCCC----C--CCcEEEEECCCCc
Confidence 4559999999999 99999999975 1 2399999998654
No 315
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=69.34 E-value=5.5 Score=37.06 Aligned_cols=41 Identities=17% Similarity=0.381 Sum_probs=33.6
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
.....|.++++..|| +|.+++|.|.+ ++ +.|+||++...-|
T Consensus 44 ~~~~~~~~~i~~~~g-~i~~~~~~p~~---~~--~~p~vv~~HGgg~ 84 (311)
T 2c7b_A 44 PIAETRDVHIPVSGG-SIRARVYFPKK---AA--GLPAVLYYHGGGF 84 (311)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEESSS---CS--SEEEEEEECCSTT
T ss_pred CcceEEEEEecCCCC-cEEEEEEecCC---CC--CCcEEEEECCCcc
Confidence 356889999999999 99999999975 12 5899999998643
No 316
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=69.16 E-value=69 Score=29.29 Aligned_cols=119 Identities=11% Similarity=0.054 Sum_probs=62.9
Q ss_pred eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEe--cCCceeeeeecccccccccccccccccceeeeEEecCC
Q 012630 94 IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWT--ADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADR 171 (459)
Q Consensus 94 ~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d--~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg 171 (459)
.+.+++|+|++++|.+...+.| ..+|.++ ..+...+.+....+.... ......+++..|..
T Consensus 122 g~EGLA~d~~~~~L~va~E~~p-----------~~i~~~~g~~~~~~l~i~~~~~~~~~~------~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 122 GFEGLAYSRQDHTFWFFKEKNP-----------IEVYKVNGLLSSNELHISKDKALQRQF------TLDDVSGAEFNQQK 184 (255)
T ss_dssp CCEEEEEETTTTEEEEEEESSS-----------EEEEEEESTTCSSCCEEEECHHHHHTC------CSSCCCEEEEETTT
T ss_pred CcceEEEeCCCCEEEEEECcCC-----------ceEEEEcccccCCceeeecchhhcccc------ccCCceeEEEcCCC
Confidence 4579999999999988764433 3456665 112212211110000000 01244577777776
Q ss_pred CceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecccc----------ceeccceeCCCCcEEEEEeecCCcc
Q 012630 172 PSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLD----------LRFRGVSWCDDSLALVQETWFKTTQ 241 (459)
Q Consensus 172 ~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~----------~~~~~~~Ws~D~~al~~~~~~~~~~ 241 (459)
. .|+.+.. ....|..++. .| +++...... ....++++.++|.++|.... +
T Consensus 185 g-~lliLS~-----------~s~~L~~~d~---~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n--- 244 (255)
T 3qqz_A 185 N-TLLVLSH-----------ESRALQEVTL---VG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-N--- 244 (255)
T ss_dssp T-EEEEEET-----------TTTEEEEECT---TC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-T---
T ss_pred C-eEEEEEC-----------CCCeEEEEcC---CC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-c---
Confidence 6 4554421 1236777777 65 655544432 13466888888865554321 2
Q ss_pred EEEEEEcCC
Q 012630 242 TRTWLISPG 250 (459)
Q Consensus 242 ~~ly~v~~~ 250 (459)
.+|++...
T Consensus 245 -~~y~f~~~ 252 (255)
T 3qqz_A 245 -RFYRFTPQ 252 (255)
T ss_dssp -EEEEEEC-
T ss_pred -eEEEEEec
Confidence 47777654
No 317
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=68.64 E-value=24 Score=32.69 Aligned_cols=73 Identities=7% Similarity=0.098 Sum_probs=47.2
Q ss_pred ceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEeccccceeccceeCCCCcEEEEEeecCCc
Q 012630 161 GMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHKLDLRFRGVSWCDDSLALVQETWFKTT 240 (459)
Q Consensus 161 ~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~~~~~~~~~~Ws~D~~al~~~~~~~~~ 240 (459)
.+..+.|++||. |+++... ...|+.++. +| +...+........++++++||..++.+.. ..
T Consensus 33 ~pegia~~~~g~--lyv~d~~-----------~~~I~~~d~---~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~--~~ 93 (306)
T 2p4o_A 33 FLENLASAPDGT--IFVTNHE-----------VGEIVSITP---DG-NQQIHATVEGKVSGLAFTSNGDLVATGWN--AD 93 (306)
T ss_dssp CEEEEEECTTSC--EEEEETT-----------TTEEEEECT---TC-CEEEEEECSSEEEEEEECTTSCEEEEEEC--TT
T ss_pred CcceEEECCCCC--EEEEeCC-----------CCeEEEECC---CC-ceEEEEeCCCCceeEEEcCCCcEEEEecc--CC
Confidence 455789999876 7766421 346888887 66 55555545555677889999876666532 12
Q ss_pred cEEEEEEcCCCC
Q 012630 241 QTRTWLISPGSK 252 (459)
Q Consensus 241 ~~~ly~v~~~~~ 252 (459)
..+++++++.++
T Consensus 94 ~~~v~~~d~~~g 105 (306)
T 2p4o_A 94 SIPVVSLVKSDG 105 (306)
T ss_dssp SCEEEEEECTTS
T ss_pred cceEEEEcCCCC
Confidence 236888876554
No 318
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=67.70 E-value=48 Score=32.48 Aligned_cols=90 Identities=9% Similarity=0.008 Sum_probs=48.6
Q ss_pred CcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCC
Q 012630 126 PQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVE 205 (459)
Q Consensus 126 ~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~ 205 (459)
...+++||+..+....+ ..+++.+.|||+|. +. ...|+ .-.+|.. +
T Consensus 145 dG~L~v~dl~~~~~~~~----------------~~~Vs~v~WSpkG~---~v-g~~dg---------~i~~~~~-----~ 190 (388)
T 1xip_A 145 VNDLSALDLRTKSTKQL----------------AQNVTSFDVTNSQL---AV-LLKDR---------SFQSFAW-----R 190 (388)
T ss_dssp TSEEEEEETTTCCEEEE----------------EESEEEEEECSSEE---EE-EETTS---------CEEEEEE-----E
T ss_pred CCCEEEEEccCCccccc----------------cCCceEEEEcCCce---EE-EEcCC---------cEEEEcC-----C
Confidence 37889999874433222 23677999999982 32 23322 1133332 2
Q ss_pred CCC---ceEecc---------ccceeccceeCCCC-cEEEEEeecC--Cc----cEEEEEEcC
Q 012630 206 GEE---PEILHK---------LDLRFRGVSWCDDS-LALVQETWFK--TT----QTRTWLISP 249 (459)
Q Consensus 206 g~~---~~~L~~---------~~~~~~~~~Ws~D~-~al~~~~~~~--~~----~~~ly~v~~ 249 (459)
+++ .+.|.. .+.....+.|.+++ +.++|..... .. ...+|.|..
T Consensus 191 ~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~~~~~~~~~~~~~~~~ii~~ 253 (388)
T 1xip_A 191 NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIKH 253 (388)
T ss_dssp TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSSCCCCEEEEEEEE
T ss_pred CccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCCCCCcCcccCCcceEEEEEc
Confidence 224 223411 23456779999876 4444544211 11 447888883
No 319
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=67.41 E-value=5.4 Score=38.92 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=30.8
Q ss_pred cceEEEcC-CCcee-ecCCC-c-eeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEec
Q 012630 75 TQLVLATL-DGTVK-EFGPP-A-IYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTA 134 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~~~-~-~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~ 134 (459)
+.|.+.|+ +|+.. .|... . .+..++|||||++|+--+. ...|.|||.
T Consensus 305 gTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~-------------D~TIklWd~ 355 (356)
T 2w18_A 305 GTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK-------------DGNIFVYHY 355 (356)
T ss_dssp SCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT-------------TSCEEEEEE
T ss_pred CcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC-------------CCcEEEecC
Confidence 45777788 77644 45432 2 2345899999999876642 367888874
No 320
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=67.19 E-value=68 Score=28.48 Aligned_cols=129 Identities=16% Similarity=0.138 Sum_probs=71.7
Q ss_pred cceEEEcCCCceeecCC---CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 75 TQLVLATLDGTVKEFGP---PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 75 sqL~~v~~~G~~~~l~~---~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
..|++++..|+...+.. ......+.++|||+ |.+... ....+++++.+|. .+.+. .|.
T Consensus 36 ~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------------~~~~i~~~~~~g~-~~~~~-~~~---- 96 (299)
T 2z2n_A 36 NMISCINLDGKITEYPLPTPDAKVMCLTISSDGE-VWFTEN------------AANKIGRITKKGI-IKEYT-LPN---- 96 (299)
T ss_dssp TEEEEECTTCCEEEEECSSTTCCEEEEEECTTSC-EEEEET------------TTTEEEEECTTSC-EEEEE-CSS----
T ss_pred CcEEEEcCCCCeEEecCCcccCceeeEEECCCCC-EEEeCC------------CCCeEEEECCCCc-EEEEe-CCC----
Confidence 45777777665554432 23456888999997 444431 1245788887754 33332 111
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc--ccceeccceeCCCCc
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK--LDLRFRGVSWCDDSL 229 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~--~~~~~~~~~Ws~D~~ 229 (459)
....+..+...+||. |+++... ...|+.++. +| +...+.. ......++.++++|.
T Consensus 97 ------~~~~~~~i~~~~~g~--l~v~~~~-----------~~~i~~~d~---~g-~~~~~~~~~~~~~~~~i~~~~~g~ 153 (299)
T 2z2n_A 97 ------PDSAPYGITEGPNGD--IWFTEMN-----------GNRIGRITD---DG-KIREYELPNKGSYPSFITLGSDNA 153 (299)
T ss_dssp ------TTCCEEEEEECTTSC--EEEEETT-----------TTEEEEECT---TC-CEEEEECSSTTCCEEEEEECTTSC
T ss_pred ------cCCCceeeEECCCCC--EEEEecC-----------CceEEEECC---CC-CEEEecCCCCCCCCceEEEcCCCC
Confidence 123566788888875 4433211 235777766 55 4444321 122345677788886
Q ss_pred EEEEEeecCCccEEEEEEcC
Q 012630 230 ALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v~~ 249 (459)
.++... ....++++++
T Consensus 154 l~v~~~----~~~~i~~~~~ 169 (299)
T 2z2n_A 154 LWFTEN----QNNAIGRITE 169 (299)
T ss_dssp EEEEET----TTTEEEEECT
T ss_pred EEEEeC----CCCEEEEEcC
Confidence 666543 1235888887
No 321
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=67.10 E-value=4.9 Score=39.47 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=33.7
Q ss_pred CCceEEEEEECCC--C--cEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 397 TLQKELIKYQRKD--G--VQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 397 ~~~~E~i~yks~D--G--~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
.++...|.|++.| | ..+.|+|++|.+- .++.|+|+|+..-..
T Consensus 40 ~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~----~~~~PvV~~~HG~~~ 85 (377)
T 4ezi_A 40 DLQLYKINYKTQSPDGNLTIASGLVAMPIHP----VGQVGIISYQHGTRF 85 (377)
T ss_dssp CEEEEEEEEEEECTTSCEEEEEEEEEEESSC----SSCEEEEEEECCCCC
T ss_pred CcEEEEEEEEEECCCCCEEEEEEEEEECCCC----CCCCcEEEEeCCCcC
Confidence 4688899998876 5 6689999999873 137999999988764
No 322
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=67.04 E-value=69 Score=28.47 Aligned_cols=130 Identities=18% Similarity=0.115 Sum_probs=69.7
Q ss_pred cceEEEcCCCceeecCC---CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 75 TQLVLATLDGTVKEFGP---PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 75 sqL~~v~~~G~~~~l~~---~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
..|++++..|+.+.+.. ......+.++|||+ |.+... ....+++++.+|.... +. .+.
T Consensus 125 ~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~------------~~~~i~~~~~~g~~~~-~~-~~~---- 185 (300)
T 2qc5_A 125 DRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNA-LWFTEN------------QNNSIGRITNTGKLEE-YP-LPT---- 185 (300)
T ss_dssp TEEEEECTTSCEEEEECSSTTCCEEEEEECTTSS-EEEEET------------TTTEEEEECTTCCEEE-EE-CSS----
T ss_pred CeEEEECCCCCEEEccCCCCCCCceeEEECCCCC-EEEEec------------CCCeEEEECCCCcEEE-ee-CCC----
Confidence 45666666565554321 22345778889988 544431 1346788887554332 21 111
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc--ccceeccceeCCCCc
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK--LDLRFRGVSWCDDSL 229 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~--~~~~~~~~~Ws~D~~ 229 (459)
....+..+...+||. |+++. .. ...|+.++. +| +...+.. ......++..+++|.
T Consensus 186 ------~~~~~~~i~~d~~g~--l~v~~-~~----------~~~i~~~~~---~g-~~~~~~~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 186 ------NAAAPVGITSGNDGA--LWFVE-IM----------GNKIGRITT---TG-EISEYDIPTPNARPHAITAGKNSE 242 (300)
T ss_dssp ------TTCCEEEEEECTTSS--EEEEE-TT----------TTEEEEECT---TC-CEEEEECSSTTCCEEEEEECSTTC
T ss_pred ------CCCCcceEEECCCCC--EEEEc-cC----------CCEEEEEcC---CC-cEEEEECCCCCCCceEEEECCCCC
Confidence 113456788888875 44332 11 235777766 54 5444321 122244577778877
Q ss_pred EEEEEeecCCccEEEEEEcCC
Q 012630 230 ALVQETWFKTTQTRTWLISPG 250 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v~~~ 250 (459)
.++.... ...|+++++.
T Consensus 243 l~v~~~~----~~~i~~~~~~ 259 (300)
T 2qc5_A 243 IWFTEWG----ANQIGRITND 259 (300)
T ss_dssp EEEEETT----TTEEEEECTT
T ss_pred EEEeccC----CCeEEEECCC
Confidence 6665421 2358888873
No 323
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=65.64 E-value=25 Score=36.69 Aligned_cols=108 Identities=12% Similarity=0.138 Sum_probs=63.1
Q ss_pred cccCC-----CCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEE-e-cC
Q 012630 98 VEPSP-----DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISW-R-AD 170 (459)
Q Consensus 98 ~~~SP-----DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~W-s-pD 170 (459)
+..|. ||++|.+.. . ...++.++|++..++..+..+|.. .+++.+.. + ||
T Consensus 90 ~~~s~t~g~~DG~~lfVnd-~-----------~~~rVavIdl~t~~~~~ii~ip~g-----------~~phg~~~~~~p~ 146 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMND-K-----------ANTRVARVRCDVMKCDAILEIPNA-----------KGIHGLRPQKWPR 146 (595)
T ss_dssp EEEEEETTEEEEEEEEEEE-T-----------TTTEEEEEETTTTEEEEEEECSSC-----------CSEEEEEECCSSB
T ss_pred cccCCCCCCcCCCEEEEEc-C-----------CCCEEEEEECCCceEeeEEeCCCC-----------CCCcceeeeecCC
Confidence 66666 999986542 2 347799999998777666666542 25567777 4 99
Q ss_pred CCceEEEEEec-------cCCccccccCCCCeEEeccCCCCCCCCceEecc--ccceeccceeCCCC-cEEEEEe
Q 012630 171 RPSTLYWVETQ-------DGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK--LDLRFRGVSWCDDS-LALVQET 235 (459)
Q Consensus 171 g~~~l~~~~~~-------d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~--~~~~~~~~~Ws~D~-~al~~~~ 235 (459)
++ .++ +... |+........+++.+-++|. +. .+.++. .+....++.-++|| .+++...
T Consensus 147 ~~-~v~-~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~---~t--~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~ 214 (595)
T 1fwx_A 147 SN-YVF-CNGEDETPLVNDGTNMEDVANYVNVFTAVDA---DK--WEVAWQVLVSGNLDNCDADYEGKWAFSTSY 214 (595)
T ss_dssp CS-EEE-EEECSCEESSCSSSSTTCGGGEEEEEEEEET---TT--TEEEEEEEESSCCCCEEECSSSSEEEEEES
T ss_pred Cc-EEE-EecccccccCCCCcccccccccCceEEEEEC---CC--CeEEEEEEeCCCccceEECCCCCEEEEEec
Confidence 88 553 4321 22211112244567777887 32 233332 22345667778886 5666543
No 324
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=63.10 E-value=4.9 Score=36.72 Aligned_cols=45 Identities=11% Similarity=-0.061 Sum_probs=31.3
Q ss_pred CCcCCceEEEEEECCCCcEEEEEEEccCCC---CCCCCCCceEEEEEcCCc
Q 012630 394 LLSTLQKELIKYQRKDGVQLTAKLYLPTGY---DPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 394 ~~~~~~~E~i~yks~DG~~l~g~L~lP~~y---d~~k~~kyP~Il~~Yp~e 441 (459)
+....+.+.|.|+..||.++...+| |++. ..++ +.|+||++...-
T Consensus 13 ~~~~~~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~--~~p~vv~lHGgg 60 (283)
T 3bjr_A 13 ENLYFQGMQVIKQKLTATCAQLTGY-LHQPDTNAHQT--NLPAIIIVPGGS 60 (283)
T ss_dssp ----CCSSEEEEEECTTSSCEEEEE-EC--------C--CEEEEEEECCST
T ss_pred hccCCCCcceEEeecCCCceeEEEe-cCCccccccCC--CCcEEEEECCCc
Confidence 3445688889999999999999999 8762 2333 799999998844
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=61.12 E-value=6.4 Score=38.38 Aligned_cols=50 Identities=18% Similarity=0.351 Sum_probs=35.5
Q ss_pred hhcceEEEcCCCceeecCCC-ceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC
Q 012630 73 TTTQLVLATLDGTVKEFGPP-AIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD 135 (459)
Q Consensus 73 ~~sqL~~v~~~G~~~~l~~~-~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~ 135 (459)
..++||.++. |+++.+... ..-.++.|||||++|++... ....|++++++
T Consensus 201 ~~g~vyr~d~-~~~~~~~~~l~~pNGia~spDg~~lYvadt------------~~~~I~~~~~~ 251 (355)
T 3sre_A 201 AWSFVTYYSP-NDVRVVAEGFDFANGINISPDGKYVYIAEL------------LAHKIHVYEKH 251 (355)
T ss_dssp CCEEEEEECT-TCCEEEEEEESSEEEEEECTTSSEEEEEEG------------GGTEEEEEEEC
T ss_pred CccEEEEEEC-CeEEEeecCCcccCcceECCCCCEEEEEeC------------CCCeEEEEEEC
Confidence 4678999985 566655432 23368999999999987742 23678888865
No 326
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=60.89 E-value=90 Score=27.67 Aligned_cols=129 Identities=16% Similarity=0.147 Sum_probs=70.8
Q ss_pred cceEEEcCCCceeecCC---CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccc
Q 012630 75 TQLVLATLDGTVKEFGP---PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENI 151 (459)
Q Consensus 75 sqL~~v~~~G~~~~l~~---~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~ 151 (459)
..|++++..|+.+.+.. ......+.++|||+ |.+... ....++++|.+|... .+. .+.
T Consensus 83 ~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------------~~~~i~~~~~~g~~~-~~~-~~~---- 143 (300)
T 2qc5_A 83 NKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGD-IWFTQL------------NGDRIGKLTADGTIY-EYD-LPN---- 143 (300)
T ss_dssp TEEEEECTTSCEEEEECSSTTCCEEEEEECSTTC-EEEEET------------TTTEEEEECTTSCEE-EEE-CSS----
T ss_pred CeEEEECCCCCeEEecCCCCCCCCccceECCCCC-EEEEcc------------CCCeEEEECCCCCEE-Ecc-CCC----
Confidence 45777777666554432 23346788889987 434421 124678888774433 222 111
Q ss_pred cccccccccceeeeEEecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCceEecc--ccceeccceeCCCCc
Q 012630 152 PIAYNSVREGMRLISWRADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEPEILHK--LDLRFRGVSWCDDSL 229 (459)
Q Consensus 152 P~~~~~~~~~~r~~~WspDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~~~L~~--~~~~~~~~~Ws~D~~ 229 (459)
....+..+...++|. |++.. .. ...|+.++. +| +...+.. ......++..+++|.
T Consensus 144 ------~~~~~~~i~~d~~g~--l~v~~-~~----------~~~i~~~~~---~g-~~~~~~~~~~~~~~~~i~~d~~g~ 200 (300)
T 2qc5_A 144 ------KGSYPAFITLGSDNA--LWFTE-NQ----------NNSIGRITN---TG-KLEEYPLPTNAAAPVGITSGNDGA 200 (300)
T ss_dssp ------TTCCEEEEEECTTSS--EEEEE-TT----------TTEEEEECT---TC-CEEEEECSSTTCCEEEEEECTTSS
T ss_pred ------CCCCceeEEECCCCC--EEEEe-cC----------CCeEEEECC---CC-cEEEeeCCCCCCCcceEEECCCCC
Confidence 123566788888877 44332 11 235777766 55 5444321 112244567777776
Q ss_pred EEEEEeecCCccEEEEEEcC
Q 012630 230 ALVQETWFKTTQTRTWLISP 249 (459)
Q Consensus 230 al~~~~~~~~~~~~ly~v~~ 249 (459)
.++.... ...++++++
T Consensus 201 l~v~~~~----~~~i~~~~~ 216 (300)
T 2qc5_A 201 LWFVEIM----GNKIGRITT 216 (300)
T ss_dssp EEEEETT----TTEEEEECT
T ss_pred EEEEccC----CCEEEEEcC
Confidence 6665431 225888887
No 327
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=58.58 E-value=12 Score=33.74 Aligned_cols=39 Identities=10% Similarity=0.102 Sum_probs=29.5
Q ss_pred ceEEEEEECCCCcEEEEEEEccCC---CCCCCCCCceEEEEEcCC
Q 012630 399 QKELIKYQRKDGVQLTAKLYLPTG---YDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 399 ~~E~i~yks~DG~~l~g~L~lP~~---yd~~k~~kyP~Il~~Yp~ 440 (459)
..|.+++ ..||.++...+|+|++ |+..+ +.|+||++...
T Consensus 3 ~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~--~~p~vv~~HGg 44 (277)
T 3bxp_A 3 QVEQRTL-NTAAHPFQITAYWLDQISDFETAV--DYPIMIICPGG 44 (277)
T ss_dssp EEEEEEE-CSTTCCEEEEEEEECCCCSSSCCC--CEEEEEEECCS
T ss_pred ceEEEEe-ccCCCcceEEEEeCCcccccccCC--CccEEEEECCC
Confidence 3466777 4688999999999983 33333 79999999983
No 328
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=57.82 E-value=5.8 Score=35.96 Aligned_cols=38 Identities=5% Similarity=-0.019 Sum_probs=26.6
Q ss_pred EEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 401 ELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 401 E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
+..+|.+.||..|++|+..|....+++ +.|+||++...
T Consensus 15 ~~~~~~~~~g~~l~~~~~~~~~~~~~~--~~p~vv~~HGg 52 (276)
T 3hxk_A 15 NKSTFSLNDTAWVDFYQLQNPRQNENY--TFPAIIICPGG 52 (276)
T ss_dssp CEEECCCBTTBEEEEECCCC------C--CBCEEEEECCS
T ss_pred ccccccCCCCeEEEEEEeCCcccccCC--CCCEEEEEcCC
Confidence 335678889999999998886544333 79999999984
No 329
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=56.18 E-value=14 Score=36.40 Aligned_cols=38 Identities=13% Similarity=0.030 Sum_probs=30.8
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
...|.+.++. ||..|.+++++|++ .+ +.|+||++.+--
T Consensus 166 ~~~~~v~i~~-~g~~l~~~~~~P~~---~~--~~P~vv~~hG~~ 203 (415)
T 3mve_A 166 YIIKQLEIPF-EKGKITAHLHLTNT---DK--PHPVVIVSAGLD 203 (415)
T ss_dssp SEEEEEEEEC-SSSEEEEEEEESCS---SS--CEEEEEEECCTT
T ss_pred CCeEEEEEEE-CCEEEEEEEEecCC---CC--CCCEEEEECCCC
Confidence 4578888887 89999999999976 22 689999998743
No 330
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=55.50 E-value=1.5e+02 Score=28.58 Aligned_cols=62 Identities=15% Similarity=0.173 Sum_probs=34.7
Q ss_pred hcceEEEcCCCceeecCCCceeeecccCC----CCCe--EEEEEeccCcccccccCCCCcceEEEec--CCceeeeeec
Q 012630 74 TTQLVLATLDGTVKEFGPPAIYTAVEPSP----DQKY--ILITSIDRPYSFTVSYTKFPQKVQVWTA--DGKFVRQLCE 144 (459)
Q Consensus 74 ~sqL~~v~~~G~~~~l~~~~~~~~~~~SP----DG~~--l~~~~~~~p~s~~v~~~~~~~~~~v~d~--~g~~~~~lt~ 144 (459)
.+.|+++|++|+..+.-..+...++..=| .|+. |++.+++.. ...++-++++ +.+.++.+..
T Consensus 49 ~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~---------~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 49 KSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSE---------GKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp TTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECST---------TCCEEEEEEECTTTCCEEECSC
T ss_pred CCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCC---------CCCeEEEEEECCCCCceeeccc
Confidence 36899999988666543323233333333 4665 778876520 0355667754 4455555544
No 331
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.15 E-value=38 Score=35.30 Aligned_cols=73 Identities=18% Similarity=0.165 Sum_probs=42.4
Q ss_pred ecccCCCCCeEEEEEeccCcccccccC-CCCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceE
Q 012630 97 AVEPSPDQKYILITSIDRPYSFTVSYT-KFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTL 175 (459)
Q Consensus 97 ~~~~SPDG~~l~~~~~~~p~s~~v~~~-~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l 175 (459)
.+.++|+|+ |.+.. ....+-...+. .....+++.+...++++++...|..- ..-.+.|+||++ +|
T Consensus 480 NL~fd~~G~-LwI~e-Dg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~ga-----------E~TG~~fspDg~-tl 545 (592)
T 3zwu_A 480 GLGFDKAGR-LWILT-DGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGC-----------EVTGISFSPDQK-TL 545 (592)
T ss_dssp EEEECTTCC-EEEEE-CCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTC-----------EEEEEEECTTSS-EE
T ss_pred ceEECCCCC-EEEEe-cCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCc-----------cCcCeeECCCCC-EE
Confidence 678999998 44443 22111111111 12456777777767777777665422 223679999998 65
Q ss_pred EEEEeccCC
Q 012630 176 YWVETQDGG 184 (459)
Q Consensus 176 ~~~~~~d~g 184 (459)
+ +..|-.|
T Consensus 546 f-vniQHPG 553 (592)
T 3zwu_A 546 F-VGIQHPG 553 (592)
T ss_dssp E-EEEESTT
T ss_pred E-EEEECCC
Confidence 4 5566555
No 332
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=52.21 E-value=1.1e+02 Score=29.54 Aligned_cols=79 Identities=14% Similarity=0.255 Sum_probs=46.3
Q ss_pred hcceEEEcC-CCcee-ecCC----CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecC-Cceeeeeeccc
Q 012630 74 TTQLVLATL-DGTVK-EFGP----PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTAD-GKFVRQLCELP 146 (459)
Q Consensus 74 ~sqL~~v~~-~G~~~-~l~~----~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~-g~~~~~lt~~p 146 (459)
.+.|.++++ +|+.. .+.. ...+..++| +|++|+..+. ...+.+||+. |..++.+....
T Consensus 338 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~-------------dg~v~iwd~~~~~~~~~~~~~~ 402 (445)
T 2ovr_B 338 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSD-------------DGTVKLWDLKTGEFIRNLVTLE 402 (445)
T ss_dssp TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE--CSSEEEEEET-------------TSEEEEEETTTCCEEEEEEECT
T ss_pred CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE--CCCEEEEEeC-------------CCeEEEEECCCCceeeeeeccc
Confidence 456777777 66433 3432 233456666 4677766652 3678999976 55555553221
Q ss_pred ccccccccccccccceeeeEEecCCCceEE
Q 012630 147 LVENIPIAYNSVREGMRLISWRADRPSTLY 176 (459)
Q Consensus 147 ~~~~~P~~~~~~~~~~r~~~WspDg~~~l~ 176 (459)
. ......+..+.|+||+. .|+
T Consensus 403 ~--------~~~~~~v~~~~~s~~~~-~la 423 (445)
T 2ovr_B 403 S--------GGSGGVVWRIRASNTKL-VCA 423 (445)
T ss_dssp T--------GGGTCEEEEEEECSSEE-EEE
T ss_pred c--------CCCCceEEEEEecCCEE-EEE
Confidence 1 01234567899999976 444
No 333
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=51.92 E-value=1e+02 Score=30.77 Aligned_cols=140 Identities=8% Similarity=0.014 Sum_probs=65.6
Q ss_pred eecccCCCCC-eEEEEEeccCcccccccCCCCcceEEEecCCcee-eeeecccccccccccc-cccccceeeeEEecC--
Q 012630 96 TAVEPSPDQK-YILITSIDRPYSFTVSYTKFPQKVQVWTADGKFV-RQLCELPLVENIPIAY-NSVREGMRLISWRAD-- 170 (459)
Q Consensus 96 ~~~~~SPDG~-~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~-~~lt~~p~~~~~P~~~-~~~~~~~r~~~WspD-- 170 (459)
..+.+.|||+ +|+++.. ...|++++.+|... ..+..++.... .+. ..-..|.-.+.++||
T Consensus 17 ~~~a~~pdG~~rl~V~er-------------~G~i~~~~~~g~~~~~~~~~~~~~~~--~g~~~~~e~Gllgia~~P~f~ 81 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEK-------------EGYVKILTPEGEIFKEPYLDIHKLVQ--SGIKGGDERGLLSLAFHPNYK 81 (463)
T ss_dssp EEEECCSSSSCCEEEEET-------------TTEEEEECTTSCBCSSCSEECTTTBC--CCCSSSCCCSEEEEEECTTHH
T ss_pred eEEEECCCCCeEEEEEeC-------------CceEEEEeCCCCeeeeeecCCcceec--cCccccCCCcceeeEeCCCCc
Confidence 4789999997 6766642 25678887665431 22333221000 000 011345567899987
Q ss_pred -CCceEEEEEeccCCcc-ccccCCCCeEEeccCCCC-----CCCCceEecccc-----ceeccceeCCCCcEEEEEeec-
Q 012630 171 -RPSTLYWVETQDGGAA-KVEVSPRDIIYTQPAEPV-----EGEEPEILHKLD-----LRFRGVSWCDDSLALVQETWF- 237 (459)
Q Consensus 171 -g~~~l~~~~~~d~g~~-~~~~~~~~~l~~~~~~pf-----~g~~~~~L~~~~-----~~~~~~~Ws~D~~al~~~~~~- 237 (459)
.. .||...+.+.+.. .........|..+....- +-++++.|.... ...+.+.|+|||..++..-..
T Consensus 82 ~n~-~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 82 KNG-KLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp HHC-EEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCC-EEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 22 3444333222110 000001123433332000 001234444321 112458999999777754321
Q ss_pred ------------CCccEEEEEEcCCC
Q 012630 238 ------------KTTQTRTWLISPGS 251 (459)
Q Consensus 238 ------------~~~~~~ly~v~~~~ 251 (459)
.....+|++|++++
T Consensus 161 ~~~~~~~~~q~~~~~~GkIlRi~~dg 186 (463)
T 2wg3_C 161 ITLDDMEEMDGLSDFTGSVLRLDVDT 186 (463)
T ss_dssp CCHHHHHHCTTCCSCTTEEEEEBCCC
T ss_pred CCCCccccccCcCCCCeeEEEEECCC
Confidence 11256789998875
No 334
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=50.32 E-value=14 Score=38.17 Aligned_cols=35 Identities=20% Similarity=0.430 Sum_probs=27.1
Q ss_pred CCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCccCCc
Q 012630 407 RKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEFRSK 445 (459)
Q Consensus 407 s~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~~~~ 445 (459)
+.|++.|. +|.|.+..+++ ++|+|||+|..-|...
T Consensus 95 ~edcl~ln--v~~P~~~~~~~--~~Pv~v~iHGG~~~~g 129 (542)
T 2h7c_A 95 SEDCLYLN--IYTPADLTKKN--RLPVMVWIHGGGLMVG 129 (542)
T ss_dssp ESCCCEEE--EEECSCTTSCC--CEEEEEEECCSTTTSC
T ss_pred CCCCcEEE--EEECCCCCCCC--CCCEEEEECCCcccCC
Confidence 67887765 88998766444 8999999999877543
No 335
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=49.94 E-value=13 Score=38.76 Aligned_cols=42 Identities=31% Similarity=0.520 Sum_probs=31.3
Q ss_pred hhcceEEEcC-CCceeecCC-C--ceeeecccCCCCCeEEEEEeccC
Q 012630 73 TTTQLVLATL-DGTVKEFGP-P--AIYTAVEPSPDQKYILITSIDRP 115 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~-~--~~~~~~~~SPDG~~l~~~~~~~p 115 (459)
...++|.++. +|++++|.. + ....++.||||+++|.+. ...|
T Consensus 507 gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~-vQHP 552 (592)
T 4a9v_A 507 GNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG-IQHP 552 (592)
T ss_dssp CSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE-EEST
T ss_pred CCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE-EeCC
Confidence 3458999998 899988764 3 345799999999988555 4444
No 336
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=48.96 E-value=11 Score=39.51 Aligned_cols=42 Identities=29% Similarity=0.426 Sum_probs=30.2
Q ss_pred hhcceEEEcC-CCceeecCC---CceeeecccCCCCCeEEEEEeccC
Q 012630 73 TTTQLVLATL-DGTVKEFGP---PAIYTAVEPSPDQKYILITSIDRP 115 (459)
Q Consensus 73 ~~sqL~~v~~-~G~~~~l~~---~~~~~~~~~SPDG~~l~~~~~~~p 115 (459)
...++|.++. .|++++|.. .....++.|||||++| |+....|
T Consensus 507 gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tl-fvniQHP 552 (592)
T 3zwu_A 507 GNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTL-FVGIQHP 552 (592)
T ss_dssp CSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEE-EEEEEST
T ss_pred ccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEE-EEEEECC
Confidence 3456777777 788888764 3456799999999997 5555544
No 337
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=46.55 E-value=30 Score=32.70 Aligned_cols=45 Identities=16% Similarity=0.246 Sum_probs=31.8
Q ss_pred cCCceEEEEEECCCCcEEEEEEEccCCCCC------------CCCCCceEEEEEcCCcc
Q 012630 396 STLQKELIKYQRKDGVQLTAKLYLPTGYDP------------SKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 396 ~~~~~E~i~yks~DG~~l~g~L~lP~~yd~------------~k~~kyP~Il~~Yp~e~ 442 (459)
..+..+.+.+.+ |..|...||+|++... ...+++|+||+++..-|
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~ 124 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSF 124 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTT
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcC
Confidence 446777888877 4458889999987521 01237999999999544
No 338
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=46.30 E-value=1.1e+02 Score=30.89 Aligned_cols=121 Identities=9% Similarity=0.121 Sum_probs=68.5
Q ss_pred eecccCC-CCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecccccccccccccccccceeeeEE-------
Q 012630 96 TAVEPSP-DQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISW------- 167 (459)
Q Consensus 96 ~~~~~SP-DG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~W------- 167 (459)
..++++| ++..|.+.. + ....++++|++++.+..+..... .....++.+.|
T Consensus 142 ~~la~dp~~~~~Lyv~~-~-----------~~~~i~~ID~~~~~v~~l~~~~~---------~~~~~p~~ia~~~~~~~~ 200 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICY-D-----------GHKAIQLIDLKNRMLSSPLNINT---------IPTNRIRSIAFNKKIEGY 200 (496)
T ss_dssp EEEEEETTEEEEEEEEE-E-----------TEEEEEEEETTTTEEEEEECCTT---------SSCSBEEEEEECCCBTTT
T ss_pred CEEEEccCCCCEEEEEE-C-----------CCCeEEEEECCCCEEEEEEccCc---------cccCCCcEEEEeeccccc
Confidence 4788999 577665553 2 12458899999888887765311 01235789999
Q ss_pred ecCCCceEEEEEeccCCccccccCCCCeEEeccCCCCCCCCc------eEeccccceeccceeCCC-CcEEEEEeecCCc
Q 012630 168 RADRPSTLYWVETQDGGAAKVEVSPRDIIYTQPAEPVEGEEP------EILHKLDLRFRGVSWCDD-SLALVQETWFKTT 240 (459)
Q Consensus 168 spDg~~~l~~~~~~d~g~~~~~~~~~~~l~~~~~~pf~g~~~------~~L~~~~~~~~~~~Ws~D-~~al~~~~~~~~~ 240 (459)
+++|. +|+.+...++.. ..+..|+.++..+ +| +. +.+... ....+++-+++ +.+++....
T Consensus 201 d~~G~-~lyvad~~~~~~-----~~~~~V~~i~r~~-~G-~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~---- 267 (496)
T 3kya_A 201 ADEAE-YMIVAIDYDGKG-----DESPSVYIIKRNA-DG-TFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYE---- 267 (496)
T ss_dssp BCTTC-EEEEEECCCTTG-----GGEEEEEEEECCT-TS-CCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETT----
T ss_pred CCCCC-EEEEEeCCCCCc-----ccCceEEEEecCC-CC-ceeecccceeeccC-CCceEEEEcCCCCeEEEEECC----
Confidence 99998 777654322110 1123466664411 22 22 233211 12345566774 565655432
Q ss_pred cEEEEEEcCC
Q 012630 241 QTRTWLISPG 250 (459)
Q Consensus 241 ~~~ly~v~~~ 250 (459)
...||+++++
T Consensus 268 ~g~V~r~d~~ 277 (496)
T 3kya_A 268 KGQVFRLDLV 277 (496)
T ss_dssp TTEEEEECHH
T ss_pred CCEEEEEecc
Confidence 2359999986
No 339
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=42.15 E-value=2.3e+02 Score=26.93 Aligned_cols=48 Identities=15% Similarity=0.193 Sum_probs=29.4
Q ss_pred cceEEEcC-CCcee-ecC-CCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCc
Q 012630 75 TQLVLATL-DGTVK-EFG-PPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGK 137 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~-~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~ 137 (459)
+.|.+.++ +|+.. .+. ..+.+..++| ||++|+..+. ...+.+||+..+
T Consensus 153 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~-------------dg~i~vwd~~~~ 203 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS-------------DSTVRVWDVNTG 203 (435)
T ss_dssp SCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET-------------TSCEEEEESSSC
T ss_pred CeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcC-------------CCeEEEEECCCC
Confidence 45666666 55443 232 2344556666 8888876652 367899997643
No 340
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=39.26 E-value=27 Score=29.67 Aligned_cols=23 Identities=30% Similarity=0.316 Sum_probs=20.7
Q ss_pred ceEEEEEECCCCcEEEEEEEccCC
Q 012630 399 QKELIKYQRKDGVQLTAKLYLPTG 422 (459)
Q Consensus 399 ~~E~i~yks~DG~~l~g~L~lP~~ 422 (459)
.+|.+++++.|| +|+++++.|.+
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~ 27 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG 27 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS
T ss_pred ccceEEEECCCc-eEEEEEEcCCC
Confidence 578899999999 99999999975
No 341
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=37.50 E-value=31 Score=35.45 Aligned_cols=38 Identities=26% Similarity=0.602 Sum_probs=27.7
Q ss_pred ECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCccCCccc
Q 012630 406 QRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEFRSKDA 447 (459)
Q Consensus 406 ks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~~~~~~ 447 (459)
.+.|.+.|. +|.|.+..+++ ++|+|||+|..-|.....
T Consensus 101 ~sedcl~l~--v~~P~~~~~~~--~~Pviv~iHGGg~~~g~~ 138 (544)
T 1thg_A 101 MNEDCLYLN--VFRPAGTKPDA--KLPVMVWIYGGAFVYGSS 138 (544)
T ss_dssp BCSCCCEEE--EEEETTCCTTC--CEEEEEEECCCTTCCSGG
T ss_pred CCCCCeEEE--EEeCCCCCCCC--CCcEEEEECCCccccCCc
Confidence 467887664 77898765444 899999999987765443
No 342
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=37.45 E-value=29 Score=35.65 Aligned_cols=37 Identities=22% Similarity=0.531 Sum_probs=27.4
Q ss_pred ECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCccCCcc
Q 012630 406 QRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEFRSKD 446 (459)
Q Consensus 406 ks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~~~~~ 446 (459)
.+.|.+.| .+|+|.+..+++ ++|+|||+|..-|....
T Consensus 93 ~sedcl~l--~v~~P~~~~~~~--~~Pv~v~iHGGg~~~g~ 129 (534)
T 1llf_A 93 QSEDCLTI--NVVRPPGTKAGA--NLPVMLWIFGGGFEIGS 129 (534)
T ss_dssp BCSCCCEE--EEEECTTCCTTC--CEEEEEEECCSTTTSCC
T ss_pred CCCCCeEE--EEEECCCCCCCC--CceEEEEEeCCCcccCC
Confidence 46787665 577998765444 89999999998776544
No 343
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=37.20 E-value=36 Score=29.96 Aligned_cols=36 Identities=19% Similarity=0.097 Sum_probs=27.4
Q ss_pred ceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 399 QKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 399 ~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
.+|.+.++ .||.+|+++++.|.+ + +.|+||++.+.-
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~----~--~~p~vv~~HG~~ 56 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG----E--IYDMAIIFHGFT 56 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS----S--SEEEEEEECCTT
T ss_pred cceEEEec-cCCEEEEEEEEcCCC----C--CCCEEEEEcCCC
Confidence 45555555 599999999999964 3 579999988754
No 344
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=34.69 E-value=45 Score=29.49 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=26.6
Q ss_pred EEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 404 KYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 404 ~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
.++..||.+|+.+++.|.+ + +.|+||++..--
T Consensus 21 ~~~~~~g~~l~~~~~~~~~----~--~~~~vv~~hG~~ 52 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG----T--PKALIFVSHGAG 52 (303)
T ss_dssp EEECTTSCEEEEEEECCSS----C--CSEEEEEECCTT
T ss_pred eEecCCCeEEEEEEeccCC----C--CCeEEEEECCCC
Confidence 7899999999999999964 3 579999987753
No 345
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=33.98 E-value=33 Score=31.68 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=28.7
Q ss_pred ceEEE-EEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 399 QKELI-KYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 399 ~~E~i-~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
..+.+ .+...||..|+++++.|.+ + +.|+||++..--
T Consensus 33 ~~~~~~~~~~~dg~~l~~~~~~p~~----~--~~p~vv~~HG~~ 70 (342)
T 3hju_A 33 PYQDLPHLVNADGQYLFCRYWKPTG----T--PKALIFVSHGAG 70 (342)
T ss_dssp BTTSSCEEECTTSCEEEEEEECCSS----C--CSEEEEEECCTT
T ss_pred ccccCceEEccCCeEEEEEEeCCCC----C--CCcEEEEECCCC
Confidence 34445 7899999999999999963 2 469999987653
No 346
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=33.68 E-value=15 Score=34.63 Aligned_cols=34 Identities=9% Similarity=0.129 Sum_probs=24.1
Q ss_pred EEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 404 KYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 404 ~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
+++..++..|.+++|.|++ .+ +.|+|||++..-|
T Consensus 58 ~~~~~~~~~i~~~~~~p~~---~~--~~p~vv~~HGGg~ 91 (322)
T 3fak_A 58 QVEQVTVAGCAAEWVRAPG---CQ--AGKAILYLHGGGY 91 (322)
T ss_dssp EEEEEEETTEEEEEEECTT---CC--TTCEEEEECCSTT
T ss_pred eEEEEeeCCeEEEEEeCCC---CC--CccEEEEEcCCcc
Confidence 3333334469999999975 12 6899999999554
No 347
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=32.85 E-value=42 Score=31.08 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=29.6
Q ss_pred ceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 399 QKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 399 ~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
..+.++++..|| .|.+++| |. ++ +.|+||++...-|
T Consensus 55 ~~~~~~i~~~~g-~i~~~~y-~~----~~--~~p~vv~~HGgg~ 90 (311)
T 1jji_A 55 RVEDRTIKGRNG-DIRVRVY-QQ----KP--DSPVLVYYHGGGF 90 (311)
T ss_dssp EEEEEEEEETTE-EEEEEEE-ES----SS--SEEEEEEECCSTT
T ss_pred eEEEEEecCCCC-cEEEEEE-cC----CC--CceEEEEECCccc
Confidence 688999999999 9999999 52 12 6899999998664
No 348
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=32.80 E-value=24 Score=33.48 Aligned_cols=30 Identities=17% Similarity=0.452 Sum_probs=25.7
Q ss_pred CCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 408 KDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 408 ~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
..|+++.+..++| |..|. +.|.-|||||+.
T Consensus 244 ~~g~~~~~~~~~~--~~~~~--~~~~~~~~~~~~ 273 (301)
T 3dte_A 244 DTRLPLAQDSYVP--FRSGR--RMPAYVDAFPER 273 (301)
T ss_dssp HHTCCEEEEEEEE--CTTSC--EEEEEEEEEECS
T ss_pred HcCCCccccccCc--ccccc--cCcccccccCCC
Confidence 4789999999999 66555 899999999985
No 349
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=32.61 E-value=74 Score=29.45 Aligned_cols=43 Identities=14% Similarity=-0.023 Sum_probs=30.1
Q ss_pred CceEEEEEECCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 398 LQKELIKYQRKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 398 ~~~E~i~yks~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
...|.++++..||..|+.+.+.|........++.|+||++..-
T Consensus 25 ~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~ 67 (377)
T 1k8q_A 25 YPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGL 67 (377)
T ss_dssp CCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCT
T ss_pred CCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCC
Confidence 4678889999999999999998754210001246888887663
No 350
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=30.28 E-value=1.8e+02 Score=30.12 Aligned_cols=73 Identities=16% Similarity=0.127 Sum_probs=42.8
Q ss_pred ecccCCCCCeEEEEEeccCcccccccCC-CCcceEEEecCCceeeeeecccccccccccccccccceeeeEEecCCCceE
Q 012630 97 AVEPSPDQKYILITSIDRPYSFTVSYTK-FPQKVQVWTADGKFVRQLCELPLVENIPIAYNSVREGMRLISWRADRPSTL 175 (459)
Q Consensus 97 ~~~~SPDG~~l~~~~~~~p~s~~v~~~~-~~~~~~v~d~~g~~~~~lt~~p~~~~~P~~~~~~~~~~r~~~WspDg~~~l 175 (459)
++.++++|. |.|.+. ..++..-.+.. ....++.++.+.++++.+...|.. ..+-.+.||||++ +|
T Consensus 480 nL~fd~~G~-LWf~TD-~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~-----------aEpnGiafSPD~k-tL 545 (592)
T 4a9v_A 480 GLGFDKAGR-LWILTD-GDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-----------CEVTGISFSPDQK-TL 545 (592)
T ss_dssp EEEECTTCC-EEEEEC-CCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT-----------CEEEEEEECTTSS-EE
T ss_pred ceEECCCCC-EEEEeC-CCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC-----------ccccCCEECCCCC-EE
Confidence 788999995 667543 22221111111 245788888876667766654321 2345789999998 66
Q ss_pred EEEEeccCC
Q 012630 176 YWVETQDGG 184 (459)
Q Consensus 176 ~~~~~~d~g 184 (459)
+ +..|..|
T Consensus 546 f-V~vQHPG 553 (592)
T 4a9v_A 546 F-VGIQHPG 553 (592)
T ss_dssp E-EEEESTT
T ss_pred E-EEEeCCC
Confidence 5 4455444
No 351
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=29.67 E-value=1.8e+02 Score=30.06 Aligned_cols=72 Identities=14% Similarity=0.245 Sum_probs=41.9
Q ss_pred ccEEEEEEcCCCCCCCceEEeecCCC---CccCCCCCCCeeeCCCCCEEEEEeeeccCCCcEEEEEcCCCCCCCCcceEE
Q 012630 240 TQTRTWLISPGSKDTAPLILFDRSSE---DVYSDPGLPMMRKSSTGTRVIAKIKKENDQGTYILLNGRGATPEGDVPFLD 316 (459)
Q Consensus 240 ~~~~ly~v~~~~~~~~~~~l~d~~~~---d~y~~pg~~~~~~~~dg~~v~~~~~~~~~~~~~ly~~~~g~s~~gd~~~l~ 316 (459)
...-+|.+|+.++. .+++||+.+.. +.-..-+.|......+|+ ++.+.|.|.....+...|+
T Consensus 162 GG~~~yALDVT~P~-~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~--------------w~~vfG~GY~~~~~~~~Ly 226 (570)
T 3hx6_A 162 GGKGLFALDVTDPA-NIKLLWEIGVDQEPDLGYSFPKPTVARLHNGK--------------WAVVTGNGYSSMNDKAALL 226 (570)
T ss_dssp SCSEEEEEECSSGG-GCEEEEEEETTTCTTCCBCCSCCEEEECTTSS--------------EEEEEECCBSCTTCCEEEE
T ss_pred CCcEEEEEECCCCC-CCceeEEECCCCccccCccccCCEEEEecCCC--------------EEEEEccccCCCCCccEEE
Confidence 34468999987654 47999877621 111111233333333444 4555555544444567899
Q ss_pred EEECCCCceE
Q 012630 317 LFNINTGSKE 326 (459)
Q Consensus 317 ~~~l~tg~~~ 326 (459)
.+|+++|+.-
T Consensus 227 v~d~~tG~li 236 (570)
T 3hx6_A 227 IIDMETGAIT 236 (570)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCceE
Confidence 9999988754
No 352
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=28.38 E-value=74 Score=31.36 Aligned_cols=26 Identities=19% Similarity=0.359 Sum_probs=20.8
Q ss_pred EEEEEEEccCCCCCCCCCCceEEEEEcCCcc
Q 012630 412 QLTAKLYLPTGYDPSKDGHLLCLFWAYPGEF 442 (459)
Q Consensus 412 ~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~ 442 (459)
.|.|+|++|++ + ++.|+||+++....
T Consensus 160 ~l~~~l~~P~~--~---~~~P~Vv~lhG~~~ 185 (446)
T 3hlk_A 160 RVRGTLFLPPE--P---GPFPGIVDMFGTGG 185 (446)
T ss_dssp TEEEEEEECSS--S---CCBCEEEEECCSSC
T ss_pred eEEEEEEeCCC--C---CCCCEEEEECCCCc
Confidence 79999999975 1 26899999987643
No 353
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=27.53 E-value=37 Score=35.28 Aligned_cols=38 Identities=29% Similarity=0.638 Sum_probs=27.2
Q ss_pred EEECCCCcEEEEEEEccCCCC-CCCCCCceEEEEEcCCccCCc
Q 012630 404 KYQRKDGVQLTAKLYLPTGYD-PSKDGHLLCLFWAYPGEFRSK 445 (459)
Q Consensus 404 ~yks~DG~~l~g~L~lP~~yd-~~k~~kyP~Il~~Yp~e~~~~ 445 (459)
.+.+.|.+.|. +|.|.+.. .++ ++|+|||+|..-|...
T Consensus 74 ~~~sedcl~ln--v~~P~~~~~~~~--~~PV~v~iHGGg~~~G 112 (579)
T 2bce_A 74 TYGNEDCLYLN--IWVPQGRKEVSH--DLPVMIWIYGGAFLMG 112 (579)
T ss_dssp EESCSCCCEEE--EEEEECSSSCCC--SEEEEEECCCCSEEEC
T ss_pred CCCCCCCCEEE--EEECCCCCCCCC--CCeEEEEECCCcccCC
Confidence 45688987775 66787653 233 7999999999876543
No 354
>2jub_A IPI, internal protein I; T4 phage, solution, endonuclease inhibitor; NMR {Enterobacteria phage T4}
Probab=26.65 E-value=9.3 Score=26.43 Aligned_cols=32 Identities=31% Similarity=0.615 Sum_probs=24.0
Q ss_pred CCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 407 RKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 407 s~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
-.||.+|.|++|+-.|+..+|++ -+|| +-|.|
T Consensus 22 lvdgeeikgtvylgdgwsakkdg--ativ-ispae 53 (76)
T 2jub_A 22 LVDGEEIKGTVYLGDGWSAKKDG--ATIV-ISPAE 53 (76)
T ss_dssp TTTCCEEETCSSTTTTCEEEECS--SEEE-EESSC
T ss_pred eecccceeeeEEecCccccccCC--cEEE-EcchH
Confidence 35999999999999999877655 3333 45665
No 355
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=26.01 E-value=3.3e+02 Score=28.81 Aligned_cols=63 Identities=13% Similarity=0.179 Sum_probs=43.1
Q ss_pred hhcceEEEcC-CCc--eee-cCC--CceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeecc
Q 012630 73 TTTQLVLATL-DGT--VKE-FGP--PAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCEL 145 (459)
Q Consensus 73 ~~sqL~~v~~-~G~--~~~-l~~--~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~ 145 (459)
..++|+++++ +|+ .++ +.- .+.+...+.++|++.++|+... +. -+..++++|+. ++.+.++..
T Consensus 370 ~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss----~~-----~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 370 VVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIEN----SI-----VPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp TEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEEC----SS-----SCCEEEEECTT-SCEEEEECC
T ss_pred CEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEec----CC-----CCCEEEEEeCC-CcEEEEecC
Confidence 5578999998 673 555 443 3455677788999998887532 11 35788999987 566666664
No 356
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=23.55 E-value=90 Score=28.68 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=27.2
Q ss_pred CceEEEEEECC-CCcEEEEEEEccCCCCCCCCCCceEEEEEcCC
Q 012630 398 LQKELIKYQRK-DGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPG 440 (459)
Q Consensus 398 ~~~E~i~yks~-DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~ 440 (459)
.+.|.++|.+. .|.+|..+ + |+++ + ++|+|+++...
T Consensus 7 ~~v~~~~~~S~~~~~~i~v~-~-~p~~---~--~~p~vvllHG~ 43 (304)
T 1sfr_A 7 LPVEYLQVPSPSMGRDIKVQ-F-QSGG---A--NSPALYLLDGL 43 (304)
T ss_dssp CCCEEEEEEETTTTEEEEEE-E-ECCS---T--TBCEEEEECCT
T ss_pred ceEEEEEEECccCCCceEEE-E-CCCC---C--CCCEEEEeCCC
Confidence 56788888776 57888877 4 5554 3 69999999876
No 357
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=22.18 E-value=99 Score=29.98 Aligned_cols=25 Identities=28% Similarity=0.531 Sum_probs=20.4
Q ss_pred EEEEEEEccCCCCCCCCCCceEEEEEcCCc
Q 012630 412 QLTAKLYLPTGYDPSKDGHLLCLFWAYPGE 441 (459)
Q Consensus 412 ~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e 441 (459)
.|.|+|++|++ + ++.|+||+++...
T Consensus 144 ~l~~~l~~P~~--~---~~~P~Vv~~hG~~ 168 (422)
T 3k2i_A 144 RVRATLFLPPG--P---GPFPGIIDIFGIG 168 (422)
T ss_dssp TEEEEEEECSS--S---CCBCEEEEECCTT
T ss_pred cEEEEEEcCCC--C---CCcCEEEEEcCCC
Confidence 79999999986 1 2689999998853
No 358
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=21.91 E-value=57 Score=33.25 Aligned_cols=35 Identities=11% Similarity=0.308 Sum_probs=25.9
Q ss_pred CCCCcEEEEEEEccCCCCCCCCCCceEEEEEcCCccCCc
Q 012630 407 RKDGVQLTAKLYLPTGYDPSKDGHLLCLFWAYPGEFRSK 445 (459)
Q Consensus 407 s~DG~~l~g~L~lP~~yd~~k~~kyP~Il~~Yp~e~~~~ 445 (459)
+.|.+.| .+|.|.+..+++ ++|+|||+|..-|...
T Consensus 82 ~edcl~l--~v~~P~~~~~~~--~~Pviv~iHGGg~~~g 116 (522)
T 1ukc_A 82 SEDCLFI--NVFKPSTATSQS--KLPVWLFIQGGGYAEN 116 (522)
T ss_dssp ESCCCEE--EEEEETTCCTTC--CEEEEEEECCSTTTSC
T ss_pred CCcCCEE--EEEECCCCCCCC--CCCEEEEECCCccccC
Confidence 6687554 678898755444 7999999999877654
No 359
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=21.66 E-value=85 Score=24.34 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=25.1
Q ss_pred eEEEEEECCCCcEEEEEEEccCCCCCCC
Q 012630 400 KELIKYQRKDGVQLTAKLYLPTGYDPSK 427 (459)
Q Consensus 400 ~E~i~yks~DG~~l~g~L~lP~~yd~~k 427 (459)
+=.|++++.||..+...=..|+++.+++
T Consensus 64 plSfRvt~~~G~~~v~~nViPa~W~~G~ 91 (100)
T 3ft1_A 64 PFNFRFMSKGGMRNVFDEVIPTAFSIGK 91 (100)
T ss_dssp SEEEEEEETTCCEEEEEEEECTTCCTTC
T ss_pred CEEEEEEEcCCcEEEECeEeCCCCCCCc
Confidence 5668888899999999999999999886
No 360
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=21.55 E-value=1.7e+02 Score=30.66 Aligned_cols=75 Identities=11% Similarity=0.003 Sum_probs=41.4
Q ss_pred cceEEEcC-CCcee-ecCCCceeeecccCCCCCeEEEEEeccCcccccccCCCCcceEEEecCCceeeeeeccccccccc
Q 012630 75 TQLVLATL-DGTVK-EFGPPAIYTAVEPSPDQKYILITSIDRPYSFTVSYTKFPQKVQVWTADGKFVRQLCELPLVENIP 152 (459)
Q Consensus 75 sqL~~v~~-~G~~~-~l~~~~~~~~~~~SPDG~~l~~~~~~~p~s~~v~~~~~~~~~~v~d~~g~~~~~lt~~p~~~~~P 152 (459)
+.|..+|+ +|+.+ ++..+.......++..|..| |... ....++++|.+.+++.+-.+++..-
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglv-f~gt------------~dg~l~a~D~~tG~~lw~~~~~~~~--- 518 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLV-FEGS------------ADGRVIAYAADTGEKLWEQPAASGV--- 518 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEE-EEEC------------TTSEEEEEETTTCCEEEEEECSSCC---
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEE-EEEC------------CCCcEEEEECCCCccceeeeCCCCc---
Confidence 77999999 88755 33222212234566677655 4432 2366889997754444333332211
Q ss_pred ccccccccceeeeEEecCCCc
Q 012630 153 IAYNSVREGMRLISWRADRPS 173 (459)
Q Consensus 153 ~~~~~~~~~~r~~~WspDg~~ 173 (459)
... -+.|+.||+.
T Consensus 519 ------~~~--p~ty~~~G~q 531 (689)
T 1yiq_A 519 ------MAA--PVTYSVDGEQ 531 (689)
T ss_dssp ------CSC--CEEEEETTEE
T ss_pred ------ccC--ceEEEECCEE
Confidence 111 2577899883
No 361
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=20.73 E-value=86 Score=24.73 Aligned_cols=28 Identities=18% Similarity=0.292 Sum_probs=25.3
Q ss_pred eEEEEEECCCCcEEEEEEEccCCCCCCC
Q 012630 400 KELIKYQRKDGVQLTAKLYLPTGYDPSK 427 (459)
Q Consensus 400 ~E~i~yks~DG~~l~g~L~lP~~yd~~k 427 (459)
+=.|++++.||..+..+=..|+++.+++
T Consensus 75 plSfRvtts~G~~~va~nViPa~W~~Gq 102 (108)
T 2jnz_A 75 PFNFRFMSKGGMRNVFDEVIPTAFSIGK 102 (108)
T ss_dssp SEEEEEEETTTEEEEEEEEECSSCCTTC
T ss_pred CEEEEEEEcCCcEEEECeEECCCCCCCC
Confidence 6678889999999999999999999876
Done!