BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012634
(459 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55CA6|Y0146_DICDI Probable serine/threonine-protein kinase DDB_G0270146
OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1
Length = 635
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 53 LNELARRKGVLEENLKLAHDLKVAEDERY--FFMSSMLGLLADYGLWPHVTNASA----- 105
L L R G LE +LK DLK D +Y +SSM + +TN+
Sbjct: 426 LQLLRLRVGELETDLKKEQDLKKDSDRKYREILLSSMHYIYIIDSTMNTITNSGGQSIKP 485
Query: 106 -ISNTVKHLYDQLQSQIRTSY 125
ISN V HL ++ QI T Y
Sbjct: 486 QISNDVNHLRSIMRDQIETEY 506
>sp|Q9UBC2|EP15R_HUMAN Epidermal growth factor receptor substrate 15-like 1 OS=Homo
sapiens GN=EPS15L1 PE=1 SV=1
Length = 864
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 4 EEIHSLRQQIAVACLKELQLQNEKYTLERKVSELRMAIDEKQNEAITSALNELARRKGVL 63
+E+ + Q+IA QLQ EKY+LE+ + E AI +K +E + N+L R L
Sbjct: 384 KELDDISQEIA-------QLQREKYSLEQDIREKEEAIRQKTSE-VQELQNDLDRETSSL 435
Query: 64 EE 65
+E
Sbjct: 436 QE 437
>sp|Q47QS4|HIS4_THEFY 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Thermobifida fusca
(strain YX) GN=hisA PE=3 SV=1
Length = 245
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 185 HNSQMQQLFNNDSSQGFSFGSNRENLGNVPNALDLRV-----ARGPEEMNAWFPSTHNEI 239
N+ + + D F G NRE L ++ LD++V R E +NA + +
Sbjct: 43 QNAGAEWIHLVDLDAAFGRGHNRELLASIVGKLDIKVELSGGIRDDESLNAALATGCHR- 101
Query: 240 ASSISEGGPGIEG----FQIIGEATPGEKLLGCGYPVRGTTLCMFQWVRHLQD--GTRHY 293
++ G +E ++I E G++ + G VRGTTL W R D T
Sbjct: 102 ---VNIGTAALENPDWCAKVIAE--HGDR-VAIGLDVRGTTLAARGWTRDGGDLYETLER 155
Query: 294 IEGATNPEYVVTADDVDK 311
+E A Y+VT DV+K
Sbjct: 156 LEAAGCARYIVT--DVNK 171
>sp|O58107|GAL1_PYRHO Galactokinase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=galK PE=1 SV=1
Length = 350
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 367 MDSSENWEQATLILRRSIYRIKIDSTEAIIEERFPKEVSIKVPCGLSTQFVLTFS 421
+ SS ++E L +Y +K+DS ++ + + + VPCG+ QF + F
Sbjct: 102 LSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFG 156
>sp|Q60902|EP15R_MOUSE Epidermal growth factor receptor substrate 15-like 1 OS=Mus
musculus GN=Eps15l1 PE=1 SV=3
Length = 907
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 4 EEIHSLRQQIAVACLKELQLQNEKYTLERKVSELRMAIDEKQNEAITSALNELARRKGVL 63
+E+ + Q+IA QLQ EKY+LE+ + E AI +K +E + N+L R L
Sbjct: 382 KELDDISQEIA-------QLQREKYSLEQDIREKEEAIRQKTSE-VQELQNDLDRETSSL 433
Query: 64 EE 65
+E
Sbjct: 434 QE 435
>sp|Q12640|AROC_NEUCR Chorismate synthase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aro-2
PE=2 SV=2
Length = 432
Score = 32.7 bits (73), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 244 SEGGPGIEGFQIIGEATPG---EKLLGCGYPVRGTTLCMFQWVRHLQDGTRHYIEGATNP 300
S GG + IG G EK L Y V HL T + +TNP
Sbjct: 120 SSGGGRSSARETIGRVAAGAIAEKYLKLAYGVEIVAFVSSVGSEHLFPPTAEHPSPSTNP 179
Query: 301 EYV-----VTADDVDKLIAVECIPMDDQGRQGELVRRFANDQNKI 340
E++ +T + VD + V C + R +L+ +F ++ + I
Sbjct: 180 EFLKLVNSITRETVDSFLPVRCPDAEANKRMEDLITKFRDNHDSI 224
>sp|Q48NL1|PROB_PSE14 Glutamate 5-kinase OS=Pseudomonas syringae pv. phaseolicola (strain
1448A / Race 6) GN=proB PE=3 SV=1
Length = 368
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Query: 254 QIIGEATPGEKLLGCGYPVRGTTLCMFQWVR-HLQD-GTRHYIEGATNPEYVVTADDVDK 311
+++ GE+L P RG QW+ HLQ GT +GA A D
Sbjct: 240 RVLARLKGGERLGTLLSPERGMLAARKQWLAGHLQTRGTLVLDDGAV----AALAKDQKS 295
Query: 312 LIAVECIPMDDQGRQGELVRRFANDQNKIKCDLGMQSEIDAYISRGHATFSVL 364
L+ V + R+GE+V A+D +I L S I+A GH++ S++
Sbjct: 296 LLPVGVKLVQGSFRRGEMVVCVASDGREIARGLSNYSAIEAQKIIGHSSESIV 348
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,202,857
Number of Sequences: 539616
Number of extensions: 7301349
Number of successful extensions: 22406
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 22373
Number of HSP's gapped (non-prelim): 90
length of query: 459
length of database: 191,569,459
effective HSP length: 121
effective length of query: 338
effective length of database: 126,275,923
effective search space: 42681261974
effective search space used: 42681261974
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)