BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012637
(459 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 168/275 (61%), Gaps = 10/275 (3%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV 63
+RH+ G Y + LG+G+F KV T + VA+K I++ LKK M +++REIS
Sbjct: 5 KRHI--GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISY 62
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAV 122
++L+RHP++++L +V+ T I + +EY GGELF + + R+ ED R++FQQ+I A+
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAI 121
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEV 182
++CH + HR I+DFGLS + + + L T CG+P Y APEV
Sbjct: 122 EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPEV 178
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRL 242
+ K Y G + D+WSCG++LYV+L G LPF DE I N+++KV +V P ++S A+ L
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSL 238
Query: 243 ISKLLVSDPERRITIQSIMRVPWFR---KGFTRPV 274
I +++V+DP +RITIQ I R PWF + RP+
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPM 273
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 179/297 (60%), Gaps = 5/297 (1%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L YE+ +G G FAKV ++TGE VAIK+++K+ L + + +IK EI ++ +
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD--LPRIKTEIEALKNL 65
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAVDFCH 126
RH ++ +L V+ T KIF+ +EY GGELF + ++ RL E+ R F+Q++SAV + H
Sbjct: 66 RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
S+G +HR + DFGL A P+ D L T CG+ AY APE+++ K
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG-NKDYHLQTCCGSLAYAAPELIQGK 184
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
Y GS+AD+WS G++LYVL+ GFLPF D+N+M +Y+K+ + ++ P W+S + L+ ++
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQM 244
Query: 247 LVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXXQAATEKTENDRHNNQ 303
L DP++RI++++++ PW + + PV + +++ TE + + R+N Q
Sbjct: 245 LQVDPKKRISMKNLLNHPWIMQDYNYPVEWQ-SKNPFIHLDDDCVTELSVHHRNNRQ 300
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 160/264 (60%), Gaps = 6/264 (2%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V G Y +G LG GTF KV G+ +TG VA+K++N+ +++ ++ +IKREI ++L
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFC 125
RHP++++L +V++T F+ MEYV GGELF + + GR+ E AR+ FQQ++SAVD+C
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLR 184
H V HR I+DFGLS + +DG L T CG+P Y APEV+
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVIS 183
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLIS 244
+ Y G + D+WSCGVILY LL G LPF DE++ +++K+ F P +++ L+
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLM 243
Query: 245 KLLVSDPERRITIQSIMRVPWFRK 268
+L DP +R TI+ I WF++
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 159/264 (60%), Gaps = 6/264 (2%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V G Y +G LG GTF KV G+ +TG VA+K++N+ +++ ++ +IKREI ++L
Sbjct: 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKL 67
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFC 125
RHP++++L +V++T F+ MEYV GGELF + + GR+ E AR+ FQQ++SAVD+C
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLR 184
H V HR I+DFGLS + +DG L CG+P Y APEV+
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRDSCGSPNYAAPEVIS 183
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLIS 244
+ Y G + D+WSCGVILY LL G LPF DE++ +++K+ F P +++ L+
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLM 243
Query: 245 KLLVSDPERRITIQSIMRVPWFRK 268
+L DP +R TI+ I WF++
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 164/276 (59%), Gaps = 9/276 (3%)
Query: 2 EEERH---VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
E+++H V G Y +G LG GTF KV GK +TG VA+K++N+ +++ ++ +I+
Sbjct: 5 EKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR 64
Query: 59 REISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQ 117
REI ++L RHP++++L +V++T IF+ MEYV GGELF + + GRL E +R+ FQQ
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ 124
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPA 176
++S VD+CH V HR I+DFGLS + +DG L CG+P
Sbjct: 125 ILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRXSCGSPN 180
Query: 177 YVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWIS 236
Y APEV+ + Y G + D+WS GVILY LL G LPF D+++ +++K+ F P +++
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLN 240
Query: 237 TDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTR 272
L+ +L DP +R TI+ I WF++ +
Sbjct: 241 PSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPK 276
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 166/269 (61%), Gaps = 7/269 (2%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E+ H+ G Y + + +GKG FAKV + ++TG VAIK+I+K QL ++++ RE+
Sbjct: 6 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPT-SLQKLFREV 62
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLIS 120
+M+++ HPN+V+L EV+ T+K +++ MEY GGE+F VA GR++E AR F+Q++S
Sbjct: 63 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 122
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
AV +CH + + HR I+DFG S + G L T CG+P Y AP
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDTFCGSPPYAAP 179
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK 240
E+ + K YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P ++STD +
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 239
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKG 269
L+ + LV +P +R T++ IM+ W G
Sbjct: 240 NLLKRFLVLNPIKRGTLEQIMKDRWINAG 268
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 166/269 (61%), Gaps = 7/269 (2%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E+ H+ G Y + + +GKG FAKV + ++TG+ VA+K+I+K QL ++++ RE+
Sbjct: 8 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLIS 120
+M+++ HPN+V+L EV+ T+K +++ MEY GGE+F VA GR++E AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
AV +CH + + HR I+DFG S + L T CG+P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAP 181
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK 240
E+ + K YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P ++STD +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKG 269
L+ K L+ +P +R T++ IM+ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 166/269 (61%), Gaps = 7/269 (2%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E+ H+ G Y + + +GKG FAKV + ++TG+ VA+K+I+K QL ++++ RE+
Sbjct: 8 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLIS 120
+M+++ HPN+V+L EV+ T+K +++ MEY GGE+F VA GR++E AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
AV +CH + + HR I+DFG S + L T CG+P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAP 181
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK 240
E+ + K YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P ++STD +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKG 269
L+ K L+ +P +R T++ IM+ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 159/260 (61%), Gaps = 5/260 (1%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
G Y++ + LG+G+F KV TG+ VA+K+INK L K M +I+REIS +RL+R
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HP++++L +V+ +K +I + +EY G ELF + R ++ E AR++FQQ+ISAV++CH
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ HR I+DFGLS + + + L T CG+P Y APEV+ K
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLL 247
Y G + D+WSCGVILYV+L LPF DE+I +++ + + P ++S A LI ++L
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 247
Query: 248 VSDPERRITIQSIMRVPWFR 267
+ +P RI+I IM+ WF+
Sbjct: 248 IVNPLNRISIHEIMQDDWFK 267
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 164/269 (60%), Gaps = 7/269 (2%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E+ H+ G Y + + +GKG FAKV + ++TG VAIK+I+K QL ++++ RE+
Sbjct: 9 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPT-SLQKLFREV 65
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLIS 120
+M+++ HPN+V+L EV+ T+K +++ MEY GGE+F VA GR++E AR F+Q++S
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
AV +CH + + HR I+DFG S + G L CG P Y AP
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDAFCGAPPYAAP 182
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK 240
E+ + K YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P ++STD +
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 242
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKG 269
L+ + LV +P +R T++ IM+ W G
Sbjct: 243 NLLKRFLVLNPIKRGTLEQIMKDRWINAG 271
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 166/269 (61%), Gaps = 7/269 (2%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E+ H+ G Y + + +GKG FAKV + ++TG+ VA+++I+K QL ++++ RE+
Sbjct: 8 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREV 64
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLIS 120
+M+++ HPN+V+L EV+ T+K +++ MEY GGE+F VA GR++E AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
AV +CH + + HR I+DFG S + L T CG+P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAP 181
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK 240
E+ + K YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P ++STD +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKG 269
L+ K L+ +P +R T++ IM+ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 159/260 (61%), Gaps = 5/260 (1%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
G Y++ + LG+G+F KV TG+ VA+K+INK L K M +I+REIS +RL+R
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HP++++L +V+ +K +I + +EY G ELF + R ++ E AR++FQQ+ISAV++CH
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ HR I+DFGLS + + + L T CG+P Y APEV+ K
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLL 247
Y G + D+WSCGVILYV+L LPF DE+I +++ + + P ++S A LI ++L
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 248
Query: 248 VSDPERRITIQSIMRVPWFR 267
+ +P RI+I IM+ WF+
Sbjct: 249 IVNPLNRISIHEIMQDDWFK 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 159/260 (61%), Gaps = 5/260 (1%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
G Y++ + LG+G+F KV TG+ VA+K+INK L K M +I+REIS +RL+R
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HP++++L +V+ +K +I + +EY G ELF + R ++ E AR++FQQ+ISAV++CH
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ HR I+DFGLS + + + L T CG+P Y APEV+ K
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLL 247
Y G + D+WSCGVILYV+L LPF DE+I +++ + + P ++S A LI ++L
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 238
Query: 248 VSDPERRITIQSIMRVPWFR 267
+ +P RI+I IM+ WF+
Sbjct: 239 IVNPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 159/260 (61%), Gaps = 5/260 (1%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
G Y++ + LG+G+F KV TG+ VA+K+INK L K M +I+REIS +RL+R
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HP++++L +V+ +K +I + +EY G ELF + R ++ E AR++FQQ+ISAV++CH
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ HR I+DFGLS + + + L T CG+P Y APEV+ K
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNI---MTDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLL 247
Y G + D+WSCGVILYV+L LPF DE+I +++ + + P ++S A LI ++L
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 242
Query: 248 VSDPERRITIQSIMRVPWFR 267
+ +P RI+I IM+ WF+
Sbjct: 243 IVNPLNRISIHEIMQDDWFK 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 164/269 (60%), Gaps = 7/269 (2%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E+ H+ G Y + + +GKG FAKV + ++TG+ VA+K+I+K QL ++++ RE+
Sbjct: 8 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLIS 120
+M+++ HPN+V+L EV+ T+K +++ MEY GGE+F VA GR++E AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
AV +CH + + HR I+DFG S + L CG P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDAFCGAPPYAAP 181
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK 240
E+ + K YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P ++STD +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKG 269
L+ K L+ +P +R T++ IM+ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 165/269 (61%), Gaps = 7/269 (2%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E+ H+ G Y + + +GKG FAKV + ++TG+ VA+++I+K QL ++++ RE+
Sbjct: 8 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREV 64
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLIS 120
+M+++ HPN+V+L EV+ T+K +++ MEY GGE+F VA GR++E AR F+Q++S
Sbjct: 65 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
AV +CH + + HR I+DFG S + L CG+P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDEFCGSPPYAAP 181
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK 240
E+ + K YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P ++STD +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 241
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKG 269
L+ K L+ +P +R T++ IM+ W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIMKDRWMNVG 270
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 160/262 (61%), Gaps = 5/262 (1%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
G Y + + +GKG FAKV + ++TG+ VA+K+I+K QL ++++ RE+ +M+++
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVLN 64
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHS 127
HPN+V+L EV+ T+K +++ MEY GGE+F VA G ++E AR F+Q++SAV +CH
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I+DFG S + L T CG+P Y APE+ + K
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLL 247
YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P ++STD + L+ K L
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFL 241
Query: 248 VSDPERRITIQSIMRVPWFRKG 269
+ +P +R T++ IM+ W G
Sbjct: 242 ILNPSKRGTLEQIMKDRWMNVG 263
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 197 bits (502), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 160/269 (59%), Gaps = 7/269 (2%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E+ H+ G Y + + +GKG FAKV + ++TG+ VA+K+I+K QL ++++ RE+
Sbjct: 8 DEQPHI--GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLIS 120
+ +++ HPN+V+L EV+ T+K +++ EY GGE+F VA GR +E AR F+Q++S
Sbjct: 65 RIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS 124
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
AV +CH + + HR I+DFG S + L CG P Y AP
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS---NEFTFGNKLDAFCGAPPYAAP 181
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK 240
E+ + K YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P + STD +
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCE 241
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKG 269
L+ K L+ +P +R T++ I + W G
Sbjct: 242 NLLKKFLILNPSKRGTLEQIXKDRWXNVG 270
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 166/269 (61%), Gaps = 7/269 (2%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E+ H+ G Y + + +GKG FAKV + ++TG VA+K+I+K QL ++++ RE+
Sbjct: 9 DEQPHI--GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPT-SLQKLFREV 65
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLIS 120
+M+++ HPN+V+L EV+ T+K +++ MEY GGE+F VA GR++E AR F+Q++S
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 125
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
AV +CH + + HR I+DFG S + L T CG+P Y AP
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAP 182
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK 240
E+ + K YDG + D+WS GVILY L++G LPF +N+ + +V + ++ P ++STD +
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCE 242
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKG 269
L+ KLLV +P +R +++ IM+ W G
Sbjct: 243 NLLKKLLVLNPIKRGSLEQIMKDRWMNVG 271
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 146/273 (53%), Gaps = 24/273 (8%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ + +G G F + + E VA+K I + E + E +KREI R +RHP
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHP 74
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
N+V +EV+ T + + MEY GGELF ++ GR ED AR +FQQLIS V +CH+
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 130 VSHRXXXXXXXXX--XXXXXXXISDFGLSALPEQLRNDGLLHTQ----CGTPAYVAPEVL 183
V HR I DFG S +LH+Q GTPAY+APEVL
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 187
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQD----ENIMNMYRKVFKAEFVYPPW--IST 237
KK YDG AD+WSCGV LYV+L G PF+D +N ++ ++ P + IS
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 247
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFRKGF 270
+ + LIS++ V+DP +RI+I I WF K
Sbjct: 248 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 280
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 145/273 (53%), Gaps = 24/273 (8%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ + +G G F + + E VA+K I + E + +KREI R +RHP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIAANVKREIINHRSLRHP 75
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
N+V +EV+ T + + MEY GGELF ++ GR ED AR +FQQLIS V +CH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 130 VSHRXXXXXXXXX--XXXXXXXISDFGLSALPEQLRNDGLLHTQ----CGTPAYVAPEVL 183
V HR I DFG S +LH+Q GTPAY+APEVL
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQD----ENIMNMYRKVFKAEFVYPPW--IST 237
KK YDG AD+WSCGV LYV+L G PF+D +N ++ ++ P + IS
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFRKGF 270
+ + LIS++ V+DP +RI+I I WF K
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 145/273 (53%), Gaps = 24/273 (8%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ + +G G F + + E VA+K I + E + E +KREI R +RHP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHP 75
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
N+V +EV+ T + + MEY GGELF ++ GR ED AR +FQQLIS V +CH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 130 VSHRXXXXXXXXX--XXXXXXXISDFGLSALPEQLRNDGLLHTQ----CGTPAYVAPEVL 183
V HR I FG S +LH+Q GTPAY+APEVL
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYS-------KSSVLHSQPKDTVGTPAYIAPEVL 188
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQD----ENIMNMYRKVFKAEFVYPPW--IST 237
KK YDG AD+WSCGV LYV+L G PF+D +N ++ ++ P + IS
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFRKGF 270
+ + LIS++ V+DP +RI+I I WF K
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 145/273 (53%), Gaps = 24/273 (8%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ + +G G F + + E VA+K I + E + E +KREI R +RHP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER----GEKIDENVKREIINHRSLRHP 75
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
N+V +EV+ T + + MEY GGELF ++ GR ED AR +FQQLIS V +CH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 130 VSHRXXXXXXXXX--XXXXXXXISDFGLSALPEQLRNDGLLHTQ----CGTPAYVAPEVL 183
V HR I FG S +LH+Q GTPAY+APEVL
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQD----ENIMNMYRKVFKAEFVYPPW--IST 237
KK YDG AD+WSCGV LYV+L G PF+D +N ++ ++ P + IS
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFRKGF 270
+ + LIS++ V+DP +RI+I I WF K
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 146/273 (53%), Gaps = 24/273 (8%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ + +G G F + E VA+K I + E + E +KREI R +RHP
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIER----GEKIDENVKREIINHRSLRHP 75
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
N+V +EV+ T + + MEY GGELF ++ GR ED AR +FQQLIS V + H+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 130 VSHRXXXXXXXXX--XXXXXXXISDFGLSALPEQLRNDGLLHTQ----CGTPAYVAPEVL 183
V+HR I+DFG S +LH+Q GTPAY+APEVL
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYS-------KASVLHSQPKSAVGTPAYIAPEVL 188
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQD----ENIMNMYRKVFKAEFVYPPW--IST 237
KK YDG AD+WSCGV LYV+L G PF+D +N ++ ++ P + IS
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFRKGF 270
+ + LIS++ V+DP +RI+I I WF K
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 142/273 (52%), Gaps = 24/273 (8%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ + +G G F + +T E VA+K I + + E ++REI R +RHP
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLRHP 76
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
N+V +EV+ T + + MEY GGEL+ ++ GR ED AR +FQQL+S V +CHS
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 130 VSHRXXXXXXXXX--XXXXXXXISDFGLSALPEQLRNDGLLHTQ----CGTPAYVAPEVL 183
+ HR I DFG S +LH+Q GTPAY+APEVL
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVL 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRK----VFKAEFVYPP--WIST 237
++ YDG AD+WSCGV LYV+L G PF+D YRK + ++ P IS
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP 249
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFRKGF 270
+ LIS++ V+DP RI+I I WF K
Sbjct: 250 ECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 144/272 (52%), Gaps = 8/272 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++GR LGKG F VY ++ +A+KV+ K QL+KE + Q++REI + +RHPN
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ + +K+I++ +E+ GEL+ ++ + GR E + + ++L A+ +CH R V
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 136
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S LR + CGT Y+ PE++ K +D
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHD- 191
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLW GV+ Y L G PF + +R++ + +PP++S +K LISKLL
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 251
Query: 251 PERRITIQSIMRVPWFRKGFTR--PVAFSITQ 280
P +R+ ++ +M PW + R P + TQ
Sbjct: 252 PPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQ 283
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 144/272 (52%), Gaps = 8/272 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++GR LGKG F VY ++ +A+KV+ K QL+KE + Q++REI + +RHPN
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ + +K+I++ +E+ GEL+ ++ + GR E + + ++L A+ +CH R V
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S LR + CGT Y+ PE++ K +D
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHD- 190
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLW GV+ Y L G PF + +R++ + +PP++S +K LISKLL
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 251 PERRITIQSIMRVPWFRKGFTR--PVAFSITQ 280
P +R+ ++ +M PW + R P + TQ
Sbjct: 251 PPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQ 282
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 146/265 (55%), Gaps = 18/265 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK-KEFMMEQIKREISVMRLVRHP 70
Y+ +LG G F++V + T + VAIK I K+ L+ KE ME EI+V+ ++HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN---EIAVLHKIKHP 76
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L ++ + +++ M+ V GGELF + V +G E A + Q++ AV + H G
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 130 VSHRXXXXXXX---XXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ISDFGLS + + +L T CGTP YVAPEVL +K
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEVLAQK 193
Query: 187 GYDGSKA-DLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKR 241
Y SKA D WS GVI Y+LL G+ PF DEN ++ ++ KAE+ + P W IS AK
Sbjct: 194 PY--SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 242 LISKLLVSDPERRITIQSIMRVPWF 266
I L+ DPE+R T + ++ PW
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 146/265 (55%), Gaps = 18/265 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK-KEFMMEQIKREISVMRLVRHP 70
Y+ +LG G F++V + T + VAIK I K+ L+ KE ME EI+V+ ++HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN---EIAVLHKIKHP 76
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L ++ + +++ M+ V GGELF + V +G E A + Q++ AV + H G
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 130 VSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ISDFGLS + + +L T CGTP YVAPEVL +K
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEVLAQK 193
Query: 187 GYDGSKA-DLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKR 241
Y SKA D WS GVI Y+LL G+ PF DEN ++ ++ KAE+ + P W IS AK
Sbjct: 194 PY--SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 242 LISKLLVSDPERRITIQSIMRVPWF 266
I L+ DPE+R T + ++ PW
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 146/265 (55%), Gaps = 18/265 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK-KEFMMEQIKREISVMRLVRHP 70
Y+ +LG G F++V + T + VAIK I K+ L+ KE ME EI+V+ ++HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN---EIAVLHKIKHP 76
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L ++ + +++ M+ V GGELF + V +G E A + Q++ AV + H G
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 130 VSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ISDFGLS + + +L T CGTP YVAPEVL +K
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEVLAQK 193
Query: 187 GYDGSKA-DLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKR 241
Y SKA D WS GVI Y+LL G+ PF DEN ++ ++ KAE+ + P W IS AK
Sbjct: 194 PY--SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 242 LISKLLVSDPERRITIQSIMRVPWF 266
I L+ DPE+R T + ++ PW
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 144/264 (54%), Gaps = 16/264 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E LG G F++V ++ TG+ A+K I K LK + I+ EI+V+R ++H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGK--ESSIENEIAVLRKIKHEN 81
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGV 130
+V L ++ + +++ M+ V GGELF + V +G E A +Q++ AV + H G+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 131 SHRXXXXXXX---XXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
HR ISDFGLS + + + D ++ T CGTP YVAPEVL +K
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGD-VMSTACGTPGYVAPEVLAQKP 198
Query: 188 YDGSKA-DLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRL 242
Y SKA D WS GVI Y+LL G+ PF DEN ++ ++ KAE+ + P W IS AK
Sbjct: 199 Y--SKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDF 256
Query: 243 ISKLLVSDPERRITIQSIMRVPWF 266
I L+ DP +R T + R PW
Sbjct: 257 IRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 145/265 (54%), Gaps = 18/265 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK-KEFMMEQIKREISVMRLVRHP 70
Y+ +LG G F++V + T + VAIK I K L+ KE ME EI+V+ ++HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN---EIAVLHKIKHP 76
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L ++ + +++ M+ V GGELF + V +G E A + Q++ AV + H G
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 136
Query: 130 VSHRXXXXXXX---XXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ISDFGLS + + +L T CGTP YVAPEVL +K
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---GSVLSTACGTPGYVAPEVLAQK 193
Query: 187 GYDGSKA-DLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKR 241
Y SKA D WS GVI Y+LL G+ PF DEN ++ ++ KAE+ + P W IS AK
Sbjct: 194 PY--SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 242 LISKLLVSDPERRITIQSIMRVPWF 266
I L+ DPE+R T + ++ PW
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 143/272 (52%), Gaps = 8/272 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ R LGKG F VY ++ +A+KV+ K QL+KE + Q++REI + +RHPN
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ + +K+I++ +E+ GEL+ ++ + GR E + + ++L A+ +CH R V
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S LR + CGT Y+ PE++ K +D
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHD- 190
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLW GV+ Y L G PF + +R++ + +PP++S +K LISKLL
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 251 PERRITIQSIMRVPWFRKGFTR--PVAFSITQ 280
P +R+ ++ +M PW + R P + TQ
Sbjct: 251 PPQRLPLKGVMEHPWVKANSRRVLPPVYQSTQ 282
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 139/258 (53%), Gaps = 18/258 (6%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
+LG G F++V+ KQ +TG+ A+K I K F ++ EI+V++ ++H N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKS---PAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 77 EVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
++ + ++ M+ V GGELF ++ RG E A QQ++SAV + H G+ HR
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDL 132
Query: 136 ---XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSK 192
I+DFGLS ++ +G++ T CGTP YVAPEVL +K Y SK
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLS----KMEQNGIMSTACGTPGYVAPEVLAQKPY--SK 186
Query: 193 A-DLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA--EFVYPPW--ISTDAKRLISKLL 247
A D WS GVI Y+LL G+ PF +E ++ K+ + EF P W IS AK I LL
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLL 246
Query: 248 VSDPERRITIQSIMRVPW 265
DP R T + + PW
Sbjct: 247 EKDPNERYTCEKALSHPW 264
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 147/270 (54%), Gaps = 18/270 (6%)
Query: 5 RHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVM 64
R L +E+ LG+G + VY KQ T + A+KV+ K KK ++ EI V+
Sbjct: 48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKK-----IVRTEIGVL 102
Query: 65 RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVD 123
+ HPN+++L+E+ T +I + +E V GGELF ++ +G E A +Q++ AV
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVA 162
Query: 124 FCHSRGVSHRXXX---XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
+ H G+ HR I+DFGLS + E + L+ T CGTP Y AP
Sbjct: 163 YLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE---HQVLMKTVCGTPGYCAP 219
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDE-NIMNMYRKVFKAEFVY-PPW---I 235
E+LR Y G + D+WS G+I Y+LL GF PF DE M+R++ E+ + PW +
Sbjct: 220 EILRGCAY-GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEV 278
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPW 265
S +AK L+ KL+V DP++R+T ++ PW
Sbjct: 279 SLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 140/263 (53%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + R E Y +L +A+ +CHS+ V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R D T CGT Y+ PE++ + +D
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMHD- 188
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ YR++ + EF +P +++ A+ LIS+LL +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
+R+T+ ++ PW + ++P
Sbjct: 249 ASQRLTLAEVLEHPWIKANSSKP 271
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 147/261 (56%), Gaps = 9/261 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++G LLGKG+FA VY + + TG VAIK+I+K + K M+++++ E+ + ++HP+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLR---EDLARKYFQQLISAVDFCHSR 128
++EL +++ +E GE+ + + R++ E+ AR + Q+I+ + + HS
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLH-TQCGTPAYVAPEVLRKKG 187
G+ HR I+DFGL+ QL+ H T CGTP Y++PE+ +
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLAT---QLKMPHEKHYTLCGTPNYISPEIATRSA 188
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLL 247
+ G ++D+WS G + Y LL G PF + + N KV A++ P ++S +AK LI +LL
Sbjct: 189 H-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLL 247
Query: 248 VSDPERRITIQSIMRVPWFRK 268
+P R+++ S++ P+ +
Sbjct: 248 RRNPADRLSLSSVLDHPFMSR 268
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 140/277 (50%), Gaps = 6/277 (2%)
Query: 5 RHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVM 64
RH +E+GR LGKG F VY ++ + VA+KV+ K Q++KE + Q++REI +
Sbjct: 18 RHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 65 RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVD 123
+ HPN++ L +++I++ +EY GEL+ ++ + E ++L A+
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALM 137
Query: 124 FCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
+CH + V HR I+DFG S LR T CGT Y+ PE++
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK----TMCGTLDYLPPEMI 193
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLI 243
+ ++ K DLW GV+ Y LL G PF+ + YR++ K + +P + T A+ LI
Sbjct: 194 EGRMHN-EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLI 252
Query: 244 SKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQ 280
SKLL +P R+ + + PW R R + S Q
Sbjct: 253 SKLLRHNPSERLPLAQVSAHPWVRANSRRVLPPSALQ 289
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + R E Y +L +A+ +CHS+ V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R T CGT Y+ PE++ + +D
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHD- 188
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ YR++ + EF +P +++ A+ LIS+LL +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
+R+T+ ++ PW + ++P
Sbjct: 249 ASQRLTLAEVLEHPWIKANSSKP 271
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R D L CGT Y+ PE++ + +D
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL----CGTLDYLPPEMIEGRMHD- 210
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 270
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 271 PSQRPMLREVLEHPWITANSSKP 293
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY GE++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 189
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 250 PSQRPMLREVLEHPWITANSSKP 272
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R D L CGT Y+ PE++ + +D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL----CGTLDYLPPEMIEGRMHD- 185
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 246 PSQRPMLREVLEHPWITANSSKP 268
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 144/264 (54%), Gaps = 12/264 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y++ LGKG F+ V ++ TG+ A K+IN +L ++++RE + RL++HP
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-DHQKLEREARICRLLKHP 63
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L + ++ + ++ + V GGELF VAR E A QQ++ +V+ CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 130 VSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ++DFGL+ E + GTP Y++PEVLRK
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA--EFVYPPW--ISTDAKRL 242
Y G D+W+CGVILY+LL G+ PF DE+ +Y+++ +F P W ++ +AK L
Sbjct: 182 PY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 240
Query: 243 ISKLLVSDPERRITIQSIMRVPWF 266
I+K+L +P +RIT ++ PW
Sbjct: 241 INKMLTINPAKRITASEALKHPWI 264
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 142/264 (53%), Gaps = 15/264 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK-KEFMMEQIKREISVMRLVRHP 70
Y++ LGKG F+ V TG A K+IN +L ++F ++++RE + R ++HP
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHP 88
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L + + + ++ + V GGELF VAR E A QQ++ ++ +CHS G
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 148
Query: 130 VSHRXXXXXX---XXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ++DFGL+ ++ + H GTP Y++PEVL+K
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP--W--ISTDAKRL 242
Y D+W+CGVILY+LL G+ PF DE+ +Y ++ + YP W ++ +AK L
Sbjct: 206 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 264
Query: 243 ISKLLVSDPERRITIQSIMRVPWF 266
I +L +P++RIT ++VPW
Sbjct: 265 IDSMLTVNPKKRITADQALKVPWI 288
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 143/275 (52%), Gaps = 8/275 (2%)
Query: 1 MEEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKRE 60
M ++R +E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE
Sbjct: 4 MSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 61 ISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLI 119
+ + +RHPN++ L ++++ +EY G ++ ++ + + E Y +L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSA-LPEQLRNDGLLHTQCGTPAYV 178
+A+ +CHS+ V HR I+DFG S P R D CGT Y+
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-----LCGTLDYL 178
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTD 238
PE++ + +D K DLWS GV+ Y L G PF+ Y+++ + EF +P +++
Sbjct: 179 PPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
A+ LIS+LL +P +R ++ ++ PW ++P
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R D L CGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL----CGTLDYLPPEMIEGRMHD- 187
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 248 PSQRPMLREVLEHPWITANSSKP 270
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 143/265 (53%), Gaps = 16/265 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y++ LGKG F+ V +++ G+ A K+IN +L ++++RE + RL++HPN
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR-DHQKLEREARICRLLKHPN 82
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGV 130
+V L + ++ + ++ + V GGELF VAR E A QQ++ AV CH GV
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 131 SHRXXXXXXXXXXXX---XXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HR ++DFGL+ EQ G GTP Y++PEVLRK
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF----AGTPGYLSPEVLRK 198
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA--EFVYPPW--ISTDAKR 241
Y G DLW+CGVILY+LL G+ PF DE+ +Y+++ +F P W ++ +AK
Sbjct: 199 DPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 257
Query: 242 LISKLLVSDPERRITIQSIMRVPWF 266
LI+K+L +P +RIT ++ PW
Sbjct: 258 LINKMLTINPSKRITAAEALKHPWI 282
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 142/264 (53%), Gaps = 15/264 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK-KEFMMEQIKREISVMRLVRHP 70
Y++ LGKG F+ V TG A K+IN +L ++F ++++RE + R ++HP
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHP 65
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L + + + ++ + V GGELF VAR E A QQ++ ++ +CHS G
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 130 VSHRXXXXXX---XXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ++DFGL+ ++ + H GTP Y++PEVL+K
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP--W--ISTDAKRL 242
Y D+W+CGVILY+LL G+ PF DE+ +Y ++ + YP W ++ +AK L
Sbjct: 183 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 241
Query: 243 ISKLLVSDPERRITIQSIMRVPWF 266
I +L +P++RIT ++VPW
Sbjct: 242 IDSMLTVNPKKRITADQALKVPWI 265
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 144/264 (54%), Gaps = 12/264 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y++ LGKG F+ V ++ TG+ A K+IN +L ++++RE + RL++HP
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-DHQKLEREARICRLLKHP 63
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L + ++ + ++ + V GGELF VAR E A QQ++ +V+ CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 130 VSHRXXX---XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ++DFGL+ E + GTP Y++PEVLRK
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA--EFVYPPW--ISTDAKRL 242
Y G D+W+CGVILY+LL G+ PF DE+ +Y+++ +F P W ++ +AK L
Sbjct: 182 PY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 240
Query: 243 ISKLLVSDPERRITIQSIMRVPWF 266
I+K+L +P +RIT ++ PW
Sbjct: 241 INKMLTINPAKRITASEALKHPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 142/264 (53%), Gaps = 15/264 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK-KEFMMEQIKREISVMRLVRHP 70
Y++ LGKG F+ V TG A K+IN +L ++F ++++RE + R ++HP
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHP 65
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L + + + ++ + V GGELF VAR E A QQ++ ++ +CHS G
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 130 VSHRXXXXXX---XXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ++DFGL+ ++ + H GTP Y++PEVL+K
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP--W--ISTDAKRL 242
Y D+W+CGVILY+LL G+ PF DE+ +Y ++ + YP W ++ +AK L
Sbjct: 183 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 241
Query: 243 ISKLLVSDPERRITIQSIMRVPWF 266
I +L +P++RIT ++VPW
Sbjct: 242 IDSMLTVNPKKRITADQALKVPWI 265
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 146
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 201
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 261
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 262 PSQRPMLREVLEHPWITANSSKP 284
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 142/264 (53%), Gaps = 15/264 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK-KEFMMEQIKREISVMRLVRHP 70
Y++ LGKG F+ V TG A K+IN +L ++F ++++RE + R ++HP
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHP 64
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L + + + ++ + V GGELF VAR E A QQ++ ++ +CHS G
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 124
Query: 130 VSHRXXXXXX---XXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR ++DFGL+ ++ + H GTP Y++PEVL+K
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP--W--ISTDAKRL 242
Y D+W+CGVILY+LL G+ PF DE+ +Y ++ + YP W ++ +AK L
Sbjct: 182 PY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSL 240
Query: 243 ISKLLVSDPERRITIQSIMRVPWF 266
I +L +P++RIT ++VPW
Sbjct: 241 IDSMLTVNPKKRITADQALKVPWI 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 210
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 270
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 271 PSQRPMLREVLEHPWITANSSKP 293
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 137/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE + + +D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEXIEGRXHD- 189
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 250 PSQRPXLREVLEHPWITANSSKP 272
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL----CGTLDYLPPEMIEGRMHD- 187
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 248 PSQRPMLREVLEHPWITANSSKP 270
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL----CGTLDYLPPEMIEGRMHD- 184
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ + Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 143/266 (53%), Gaps = 16/266 (6%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y++ LGKG F+ V +++ G+ A +IN +L ++++RE + RL++HP
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR-DHQKLEREARICRLLKHP 70
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L + ++ + ++ + V GGELF VAR E A QQ++ AV CH G
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 130 VSHRXXXXXXXXXXXX---XXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEVLR 184
V HR ++DFGL+ EQ G GTP Y++PEVLR
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF----AGTPGYLSPEVLR 186
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA--EFVYPPW--ISTDAK 240
K Y G DLW+CGVILY+LL G+ PF DE+ +Y+++ +F P W ++ +AK
Sbjct: 187 KDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245
Query: 241 RLISKLLVSDPERRITIQSIMRVPWF 266
LI+K+L +P +RIT ++ PW
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWI 271
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 187
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 248 PSQRPMLREVLEHPWITANSSKP 270
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 139/264 (52%), Gaps = 8/264 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA-LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
HR I+DFG S P R D CGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-----LCGTLDYLPPEMIEGRMHD 184
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL
Sbjct: 185 -EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 250 DPERRITIQSIMRVPWFRKGFTRP 273
+P +R ++ ++ PW ++P
Sbjct: 244 NPSQRPMLREVLEHPWITANSSKP 267
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 189
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 250 PSQRPMLREVLEHPWITANSSKP 272
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 139/264 (52%), Gaps = 8/264 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA-LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
HR I+DFG S P R D CGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-----LCGTLDYLPPEMIEGRMHD 184
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL
Sbjct: 185 -EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 243
Query: 250 DPERRITIQSIMRVPWFRKGFTRP 273
+P +R ++ ++ PW ++P
Sbjct: 244 NPSQRPMLREVLEHPWITANSSKP 267
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 139/264 (52%), Gaps = 8/264 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA-LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
HR I+DFG S P R D CGT Y+ PE++ + +D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD-----LCGTLDYLPPEMIEGRMHD 185
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL
Sbjct: 186 -EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 244
Query: 250 DPERRITIQSIMRVPWFRKGFTRP 273
+P +R ++ ++ PW ++P
Sbjct: 245 NPSQRPMLREVLEHPWITANSSKP 268
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 184
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL----CGTLDYLPPEMIEGRMHD- 186
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 247 PSQRPMLREVLEHPWITANSSKP 269
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 141/274 (51%), Gaps = 6/274 (2%)
Query: 1 MEEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKRE 60
M +R +E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE
Sbjct: 3 MGSKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 62
Query: 61 ISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLI 119
+ + +RHPN++ L ++++ +EY G ++ ++ + + E Y +L
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 122
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVA 179
+A+ +CHS+ V HR I+DFG S R L CGT Y+
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLP 178
Query: 180 PEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDA 239
PE++ + +D K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A
Sbjct: 179 PEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 237
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ LIS+LL +P +R ++ ++ PW ++P
Sbjct: 238 RDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 271
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL----CGTLDYLPPEMIEGRMHD- 184
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL----CGTLDYLPPEMIEGRMHD- 184
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 183
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 243
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 244 PSQRPMLREVLEHPWITANSSKP 266
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL----CGTLDYLPPEMIEGRMHD- 184
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL----CGTLDYLPPEMIEGRMHD- 184
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 142/263 (53%), Gaps = 12/263 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y++ +GKG F+ V +L TG A K+IN +L ++++RE + RL++H
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR-DHQKLEREARICRLLKHS 63
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L + ++ + ++ + V GGELF VAR E A QQ++ AV CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 130 VSHRXXXXXXXXXXXX---XXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
V HR ++DFGL+ E + GTP Y++PEVLRK+
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA--EFVYPPW--ISTDAKRL 242
Y G D+W+CGVILY+LL G+ PF DE+ +Y+++ +F P W ++ +AK L
Sbjct: 182 AY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 240
Query: 243 ISKLLVSDPERRITIQSIMRVPW 265
I+++L +P +RIT ++ PW
Sbjct: 241 INQMLTINPAKRITAHEALKHPW 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I++FG S R L CGT Y+ PE++ + +D
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 186
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 247 PSQRPMLREVLEHPWITANSSKP 269
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY GE++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L GT Y+ PE++ + +D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX----GTLDYLPPEMIEGRMHD- 189
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 250 PSQRPMLREVLEHPWITANSSKP 272
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I++FG S R L CGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 187
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 248 PSQRPMLREVLEHPWITANSSKP 270
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 135/256 (52%), Gaps = 6/256 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 187
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 251 PERRITIQSIMRVPWF 266
P +R ++ ++ PW
Sbjct: 248 PSQRPMLREVLEHPWI 263
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 139/266 (52%), Gaps = 11/266 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR-H 69
+E R+LGKG+F KV + TG+ A+KV+ KD + ++ +E E ++ L R H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSR 128
P + +L T ++F ME+V GG+L + + R E AR Y ++ISA+ F H +
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK 143
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
G+ +R ++DFG+ E + N T CGTP Y+APE+L++ Y
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLV 248
G D W+ GV+LY +L G PF+ EN +++ + E VYP W+ DA ++ +
Sbjct: 202 -GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMT 260
Query: 249 SDPERRITI------QSIMRVPWFRK 268
+P R+ +I+R P+F++
Sbjct: 261 KNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 135/256 (52%), Gaps = 6/256 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL----CGTLDYLPPEMIEGRMHD- 187
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 251 PERRITIQSIMRVPWF 266
P +R ++ ++ PW
Sbjct: 248 PSQRPMLREVLEHPWI 263
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 173/373 (46%), Gaps = 28/373 (7%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L +Y+ + LG G + +V K +TG AIK+I K + + E++V++ +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCH 126
HPN+++L E K+ ++ ME +GGELF ++ R + E A +Q++S + H
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 127 SRGVSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
+ HR I DFGLSA G + + GT Y+APEVL
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERLGTAYYIAPEVL 178
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDA 239
RKK YD K D+WSCGVILY+LL G+ PF + + ++V K +F + P W +S +A
Sbjct: 179 RKK-YD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 236
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXXQAATEKTENDR 299
K+L+ +L +P +RI+ + + PW K F + +H A T N +
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWIVK-FCSQKHTDVGKH--------ALTGALGNMK 287
Query: 300 HNNQEEKVSSPKFFNAFEFISSMSSGFDLSNLFENKKKTGSMFTSRYSARHIMEKIEGVA 359
+K++ ++++ +L+ +F G R E IEG
Sbjct: 288 KFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDR------KELIEGYR 341
Query: 360 KGMNFKVAKVKDF 372
K M +K V D
Sbjct: 342 KLMQWKGDTVSDL 354
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 137/263 (52%), Gaps = 6/263 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ + +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L GT Y+ PE++ + +D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTL----SGTLDYLPPEMIEGRMHD- 185
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 251 PERRITIQSIMRVPWFRKGFTRP 273
P +R ++ ++ PW ++P
Sbjct: 246 PSQRPMLREVLEHPWITANSSKP 268
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 6/256 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+GR LGKG F VY ++ +A+KV+ K QL+K + Q++RE+ + +RHPN
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
++ L ++++ +EY G ++ ++ + + E Y +L +A+ +CHS+ V
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG S R L CGT Y+ PE++ + +D
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL----CGTLDYLPPEMIEGRMHD- 181
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
K DLWS GV+ Y L G PF+ Y+++ + EF +P +++ A+ LIS+LL +
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 241
Query: 251 PERRITIQSIMRVPWF 266
P +R ++ ++ PW
Sbjct: 242 PSQRPMLREVLEHPWI 257
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 143/264 (54%), Gaps = 14/264 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ R LG G+F +V+ + G A+KV+ K+ + + +E E ++ +V HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
++ + ++IF+ M+Y++GGELF+ + + R +A+ Y ++ A+++ HS+ +
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA-LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+R I+DFG + +P+ + + CGTP Y+APEV+ K Y+
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVPD------VTYXLCGTPDYIAPEVVSTKPYN 181
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
S D WS G+++Y +LAG+ PF D N M Y K+ AE +PP+ + D K L+S+L+
Sbjct: 182 KS-IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITR 240
Query: 250 DPERRI-----TIQSIMRVPWFRK 268
D +R+ + + PWF++
Sbjct: 241 DLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 140/269 (52%), Gaps = 13/269 (4%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L +Y+ + LG G + +V K +TG AIK+I K + + E++V++ +
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCH 126
HPN+++L E K+ ++ ME +GGELF ++ R + E A +Q++S + H
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 127 SRGVSHRXXX---XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
+ HR I DFGLSA G + + GT Y+APEVL
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERLGTAYYIAPEVL 195
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDA 239
RKK YD K D+WSCGVILY+LL G+ PF + + ++V K +F + P W +S +A
Sbjct: 196 RKK-YD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 253
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRK 268
K+L+ +L +P +RI+ + + PW K
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWIVK 282
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 135/251 (53%), Gaps = 5/251 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++E +LLGKGTF KV K+ TG A+K++ K+ + + + E V++
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ ED AR Y +++SA+D+
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 264
Query: 126 HS-RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLR 184
HS + V +R I+DFGL E +++ + T CGTP Y+APEVL
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLIS 244
Y G D W GV++Y ++ G LPF +++ ++ + E +P + +AK L+S
Sbjct: 323 DNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 381
Query: 245 KLLVSDPERRI 255
LL DP++R+
Sbjct: 382 GLLKKDPKQRL 392
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 135/251 (53%), Gaps = 5/251 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++E +LLGKGTF KV K+ TG A+K++ K+ + + + E V++
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ ED AR Y +++SA+D+
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 267
Query: 126 HS-RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLR 184
HS + V +R I+DFGL E +++ + T CGTP Y+APEVL
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLE 325
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLIS 244
Y G D W GV++Y ++ G LPF +++ ++ + E +P + +AK L+S
Sbjct: 326 DNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 384
Query: 245 KLLVSDPERRI 255
LL DP++R+
Sbjct: 385 GLLKKDPKQRL 395
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 134/250 (53%), Gaps = 4/250 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++ +LLGKGTF KV ++ TG A+K++ K+ + + + E V++
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ E+ AR Y +++SA+++
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 124
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HSR V +R I+DFGL E + + + T CGTP Y+APEVL
Sbjct: 125 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLED 182
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
Y G D W GV++Y ++ G LPF +++ ++ + E +P +S +AK L++
Sbjct: 183 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 241
Query: 246 LLVSDPERRI 255
LL DP++R+
Sbjct: 242 LLKKDPKQRL 251
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 14/266 (5%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y + +LGKG+F +V K +T + A+KVINK K + I RE+ +++ + HP
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHP 81
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHSRG 129
N+++L E++ ++ E GGELF ++ R R E A + +Q+ S + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 130 VSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR I DFGLS +Q + + + GT Y+APEVLR
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-- 196
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRL 242
G K D+WS GVILY+LL+G PF +N ++ ++V ++ + P W IS DAK L
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 243 ISKLLVSDPERRITIQSIMRVPWFRK 268
I K+L P RIT + PW +K
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 134/250 (53%), Gaps = 4/250 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++ +LLGKGTF KV ++ TG A+K++ K+ + + + E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ E+ AR Y +++SA+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HSR V +R I+DFGL E + + + T CGTP Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLED 179
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
Y G D W GV++Y ++ G LPF +++ ++ + E +P +S +AK L++
Sbjct: 180 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Query: 246 LLVSDPERRI 255
LL DP++R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 142/265 (53%), Gaps = 13/265 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ R+LGKG+F +V K +TG+ A+KVI+K Q+K++ E + RE+ +++ + HP
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+++L E K ++ E GGELF + ++R R E A + +Q++S + + H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 130 VSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR I DFGLS E + + + GT Y+APEVL
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLHGT 227
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRL 242
YD K D+WS GVILY+LL+G PF N ++ +KV K ++ + P W +S AK L
Sbjct: 228 -YD-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 285
Query: 243 ISKLLVSDPERRITIQSIMRVPWFR 267
I K+L P RI+ + + W +
Sbjct: 286 IRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 134/250 (53%), Gaps = 4/250 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++ +LLGKGTF KV ++ TG A+K++ K+ + + + E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ E+ AR Y +++SA+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HSR V +R I+DFGL E + + + T CGTP Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLED 179
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
Y G D W GV++Y ++ G LPF +++ ++ + E +P +S +AK L++
Sbjct: 180 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Query: 246 LLVSDPERRI 255
LL DP++R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 142/265 (53%), Gaps = 13/265 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ R+LGKG+F +V K +TG+ A+KVI+K Q+K++ E + RE+ +++ + HP
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+++L E K ++ E GGELF + ++R R E A + +Q++S + + H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 130 VSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR I DFGLS E + + + GT Y+APEVL
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLHGT 226
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRL 242
YD K D+WS GVILY+LL+G PF N ++ +KV K ++ + P W +S AK L
Sbjct: 227 -YD-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 284
Query: 243 ISKLLVSDPERRITIQSIMRVPWFR 267
I K+L P RI+ + + W +
Sbjct: 285 IRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 141/265 (53%), Gaps = 13/265 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ R+LGKG+F +V K +TG+ A+KVI+K Q+K++ E + RE+ +++ + HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+++L E K ++ E GGELF + ++R R E A + +Q++S + + H
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 130 VSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR I DFGLS E + + + GT Y+APEVL
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLH-- 201
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRL 242
G K D+WS GVILY+LL+G PF N ++ +KV K ++ + P W +S AK L
Sbjct: 202 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 261
Query: 243 ISKLLVSDPERRITIQSIMRVPWFR 267
I K+L P RI+ + + W +
Sbjct: 262 IRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 142/265 (53%), Gaps = 14/265 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y+ + LG G + +V + +T AIK+I K + ++ E++V++L+ HPN
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-SNSKLLEEVAVLKLLDHPN 97
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHSRGV 130
+++L + K+ ++ ME KGGELF ++ R + E A +Q++S V + H +
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI 157
Query: 131 SHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
HR I DFGLSA+ E N + + GT Y+APEVLRKK
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFE---NQKKMKERLGTAYYIAPEVLRKK- 213
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRLI 243
YD K D+WS GVIL++LLAG+ PF + + RKV K ++ + P W +S AK LI
Sbjct: 214 YD-EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLI 272
Query: 244 SKLLVSDPERRITIQSIMRVPWFRK 268
++L D +RRI+ Q + PW ++
Sbjct: 273 KQMLQFDSQRRISAQQALEHPWIKE 297
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 14/266 (5%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y + +LGKG+F +V K +T + A+KVINK K + I RE+ +++ + HP
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHP 81
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHSRG 129
N+++L E++ ++ E GGELF ++ R R E A + +Q+ S + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 130 VSHRXXX---XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR I DFGLS +Q + + + GT Y+APEVLR
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-- 196
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRL 242
G K D+WS GVILY+LL+G PF +N ++ ++V ++ + P W IS DAK L
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 243 ISKLLVSDPERRITIQSIMRVPWFRK 268
I K+L P RIT + PW +K
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 14/266 (5%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y + +LGKG+F +V K +T + A+KVINK K + I RE+ +++ + HP
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHP 81
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHSRG 129
N+++L E++ ++ E GGELF ++ R R E A + +Q+ S + + H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 130 VSHRXXX---XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR I DFGLS +Q + + + GT Y+APEVLR
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLR-- 196
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRL 242
G K D+WS GVILY+LL+G PF +N ++ ++V ++ + P W IS DAK L
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 243 ISKLLVSDPERRITIQSIMRVPWFRK 268
I K+L P RIT + PW +K
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 134/251 (53%), Gaps = 5/251 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++E +LLGKGTF KV K+ TG A+K++ K+ + + + E V++
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ ED AR Y +++SA+D+
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 126
Query: 126 HS-RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLR 184
HS + V +R I+DFGL E +++ + CGTP Y+APEVL
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLIS 244
Y G D W GV++Y ++ G LPF +++ ++ + E +P + +AK L+S
Sbjct: 185 DNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 243
Query: 245 KLLVSDPERRI 255
LL DP++R+
Sbjct: 244 GLLKKDPKQRL 254
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 134/251 (53%), Gaps = 5/251 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++E +LLGKGTF KV K+ TG A+K++ K+ + + + E V++
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ ED AR Y +++SA+D+
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 126 HS-RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLR 184
HS + V +R I+DFGL E +++ + CGTP Y+APEVL
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLIS 244
Y G D W GV++Y ++ G LPF +++ ++ + E +P + +AK L+S
Sbjct: 183 DNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 241
Query: 245 KLLVSDPERRI 255
LL DP++R+
Sbjct: 242 GLLKKDPKQRL 252
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 134/251 (53%), Gaps = 5/251 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++E +LLGKGTF KV K+ TG A+K++ K+ + + + E V++
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ ED AR Y +++SA+D+
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 126 HS-RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLR 184
HS + V +R I+DFGL E +++ + CGTP Y+APEVL
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLIS 244
Y G D W GV++Y ++ G LPF +++ ++ + E +P + +AK L+S
Sbjct: 184 DNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 242
Query: 245 KLLVSDPERRI 255
LL DP++R+
Sbjct: 243 GLLKKDPKQRL 253
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 4/250 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++ +LLGKGTF KV ++ TG A+K++ K+ + + + E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ E+ AR Y +++SA+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HSR V +R I+DFGL E + + + CGTP Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
Y G D W GV++Y ++ G LPF +++ ++ + E +P +S +AK L++
Sbjct: 180 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Query: 246 LLVSDPERRI 255
LL DP++R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 4/250 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++ +LLGKGTF KV ++ TG A+K++ K+ + + + E V++
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ E+ AR Y +++SA+++
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 126
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HSR V +R I+DFGL E + + + CGTP Y+APEVL
Sbjct: 127 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 184
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
Y G D W GV++Y ++ G LPF +++ ++ + E +P +S +AK L++
Sbjct: 185 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 243
Query: 246 LLVSDPERRI 255
LL DP++R+
Sbjct: 244 LLKKDPKQRL 253
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 4/250 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++ +LLGKGTF KV ++ TG A+K++ K+ + + + E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ E+ AR Y +++SA+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HSR V +R I+DFGL E + + + CGTP Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
Y G D W GV++Y ++ G LPF +++ ++ + E +P +S +AK L++
Sbjct: 180 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Query: 246 LLVSDPERRI 255
LL DP++R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 133/250 (53%), Gaps = 4/250 (1%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
V ++ +LLGKGTF KV ++ TG A+K++ K+ + + + E V++
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
RHP + L+ T ++ MEY GGELF ++R R+ E+ AR Y +++SA+++
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYL 121
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HSR V +R I+DFGL E + + + CGTP Y+APEVL
Sbjct: 122 HSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLED 179
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
Y G D W GV++Y ++ G LPF +++ ++ + E +P +S +AK L++
Sbjct: 180 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 238
Query: 246 LLVSDPERRI 255
LL DP++R+
Sbjct: 239 LLKKDPKQRL 248
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 141/265 (53%), Gaps = 13/265 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ R+LGKG+F +V K +TG+ A+KVI+K Q+K++ E + RE+ +++ + HP
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+++L E K ++ E GGELF + ++R R E A + +Q++S + + H
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 130 VSHRXXX---XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR I DFGLS E + + + GT Y+APEVL
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVLH-- 207
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRL 242
G K D+WS GVILY+LL+G PF N ++ +KV K ++ + P W +S AK L
Sbjct: 208 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 267
Query: 243 ISKLLVSDPERRITIQSIMRVPWFR 267
I K+L P RI+ + + W +
Sbjct: 268 IRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 136/271 (50%), Gaps = 23/271 (8%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKK----------EFMMEQIKREISVMR 65
R LG G + +V K+ AIKVI K Q K E E+I EIS+++
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDF 124
+ HPN+++L +V KK ++ E+ +GGELF ++ R + E A +Q++S + +
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICY 161
Query: 125 CHSRGVSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
H + HR I DFGLS+ D L + GT Y+APE
Sbjct: 162 LHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF---FSKDYKLRDRLGTAYYIAPE 218
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE--FVYPPW--IST 237
VL+KK K D+WSCGVI+Y+LL G+ PF +N ++ +KV K + F + W IS
Sbjct: 219 VLKKKY--NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISD 276
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
+AK LI +L D +R T + + W +K
Sbjct: 277 EAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 138/265 (52%), Gaps = 13/265 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ R+LGKG+F +V K +TG+ A+KVI+K Q+K++ E + RE+ +++ + HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRG 129
N+ +L E K ++ E GGELF + ++R R E A + +Q++S + + H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 130 VSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR I DFGLS E + + GT Y+APEVL
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---XKDKIGTAYYIAPEVLH-- 201
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRL 242
G K D+WS GVILY+LL+G PF N ++ +KV K ++ + P W +S AK L
Sbjct: 202 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 261
Query: 243 ISKLLVSDPERRITIQSIMRVPWFR 267
I K L P RI+ + + W +
Sbjct: 262 IRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 66
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 247 VENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 246 VENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 66
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 247 VENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 66
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 247 VENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 66
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 247 VENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 64
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 124
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 244
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 245 VENPSARITIPDIKKDRWYNKPLKKGAKRP 274
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 246 VENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 66
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 247 VENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 141/270 (52%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 246 VENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 16/264 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y++ LGKG F+ V + + A K+IN +L ++++RE + RL++HPN
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR-DHQKLEREARICRLLKHPN 91
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAK-VARGRLREDLARKYFQQLISAVDFCHSRGV 130
+V L + ++ + ++ + V GGELF VAR E A Q++ +V+ H +
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDI 151
Query: 131 SHRXXXXXXXXXXXX---XXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HR ++DFGL+ EQ G GTP Y++PEVLRK
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGF----AGTPGYLSPEVLRK 207
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA--EFVYPPW--ISTDAKR 241
Y G D+W+CGVILY+LL G+ PF DE+ +Y+++ +F P W ++ +AK
Sbjct: 208 DPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKN 266
Query: 242 LISKLLVSDPERRITIQSIMRVPW 265
LI+++L +P +RIT ++ PW
Sbjct: 267 LINQMLTINPAKRITADQALKHPW 290
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 6/265 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWFRKGFTR 272
V +P RITI I + W+ K +
Sbjct: 246 VENPSARITIPDIKKDRWYNKPLKK 270
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 6/265 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWFRKGFTR 272
V +P RITI I + W+ K +
Sbjct: 246 VENPSARITIPDIKKDRWYNKPLKK 270
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 6/261 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWFRK 268
V +P RITI I + W+ K
Sbjct: 246 VENPSARITIPDIKKDRWYNK 266
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 6/261 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 66
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 248 VSDPERRITIQSIMRVPWFRK 268
V +P RITI I + W+ K
Sbjct: 247 VENPSARITIPDIKKDRWYNK 267
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 6/261 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWFRK 268
V +P RITI I + W+ K
Sbjct: 246 VENPSARITIPDIKKDRWYNK 266
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQL---KKEFMMEQIKREISVMRLVR 68
YEMG LG G FA V +Q TG+ A K I K +L ++ E+I+RE++++R +R
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPN++ L ++ K + + +E V GGELF +A + L ED A ++ +Q++ V + HS
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
+ ++H + DFG++ ++ GTP +VAPE++
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ + + Y S A
Sbjct: 184 NYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 242
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP+RR+TI + W +
Sbjct: 243 KDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 140/270 (51%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 246 VENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 6/265 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + ++ H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINAMLNHEN 66
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ CGT YVAPE+L+++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 248 VSDPERRITIQSIMRVPWFRKGFTR 272
V +P RITI I + W+ K +
Sbjct: 247 VENPSARITIPDIKKDRWYNKPLKK 271
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 142/272 (52%), Gaps = 20/272 (7%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKE--FMMEQIKREISVMRLVRH 69
YE+ ++GKG F+ V TG+ A+K+++ + E +KRE S+ +++H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGEL-FAKVARGR----LREDLARKYFQQLISAVDF 124
P++VEL E ++ +++ E++ G +L F V R E +A Y +Q++ A+ +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 125 CHSRGVSHRXX---XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLH-TQCGTPAYVAP 180
CH + HR + DFG++ QL GL+ + GTP ++AP
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAI---QLGESGLVAGGRVGTPHFMAP 202
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP--W--IS 236
EV++++ Y G D+W CGVIL++LL+G LPF ++ + K ++ P W IS
Sbjct: 203 EVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHIS 260
Query: 237 TDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
AK L+ ++L+ DP RIT+ + PW ++
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 136/261 (52%), Gaps = 8/261 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV-RHP 70
+E+ ++LGKG+F KV+ + T + AIK + KD + + +E E V+ L HP
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF--QQLISAVDFCHSR 128
+ + TK+ +F MEY+ GG+L + + DL+R F ++I + F HS+
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK 138
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
G+ +R I+DFG+ E + D + CGTP Y+APE+L + Y
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLGQKY 196
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLV 248
+ S D WS GV+LY +L G PF ++ ++ + YP W+ +AK L+ KL V
Sbjct: 197 NHS-VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV 255
Query: 249 SDPERRITIQSIMRV-PWFRK 268
+PE+R+ ++ +R P FR+
Sbjct: 256 REPEKRLGVRGDIRQHPLFRE 276
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 139/268 (51%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQL---KKEFMMEQIKREISVMRLVR 68
YEMG LG G FA V +Q TG+ A K I K +L ++ E+I+RE++++R +R
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPN++ L ++ K + + +E V GGELF +A + L ED A ++ +Q++ V + HS
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
+ ++H + DFG++ ++ GTP +VAPE++
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEIV 190
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ + + Y S A
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 249
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP+RR+ I + W +
Sbjct: 250 KDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 139/268 (51%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQL---KKEFMMEQIKREISVMRLVR 68
YEMG LG G FA V +Q TG+ A K I K +L ++ E+I+RE++++R +R
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPN++ L ++ K + + +E V GGELF +A + L ED A ++ +Q++ V + HS
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
+ ++H + DFG++ ++ GTP +VAPE++
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ + + Y S A
Sbjct: 205 NYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 263
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP+RR+ I + W +
Sbjct: 264 KDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKE---FMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTPA+VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPAFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP++R+TIQ ++ PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 138/269 (51%), Gaps = 14/269 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKE--FMMEQIKREISVMRLVRH 69
YE+ ++GKG F+ V TG+ A+K+++ + E +KRE S+ +++H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGEL-FAKVARGR----LREDLARKYFQQLISAVDF 124
P++VEL E ++ +++ E++ G +L F V R E +A Y +Q++ A+ +
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 125 CHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLH-TQCGTPAYVAPEVL 183
CH + HR G + QL GL+ + GTP ++APEV+
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP--W--ISTDA 239
+++ Y G D+W CGVIL++LL+G LPF ++ + K ++ P W IS A
Sbjct: 208 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESA 265
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRK 268
K L+ ++L+ DP RIT+ + PW ++
Sbjct: 266 KDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 16/282 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQH 281
K I +LLV DP++R+TIQ ++ PW + T+ S H
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 290
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 138/269 (51%), Gaps = 14/269 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKE--FMMEQIKREISVMRLVRH 69
YE+ ++GKG F+ V TG+ A+K+++ + E +KRE S+ +++H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGEL-FAKVARGR----LREDLARKYFQQLISAVDF 124
P++VEL E ++ +++ E++ G +L F V R E +A Y +Q++ A+ +
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 125 CHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLH-TQCGTPAYVAPEVL 183
CH + HR G + QL GL+ + GTP ++APEV+
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP--W--ISTDA 239
+++ Y G D+W CGVIL++LL+G LPF ++ + K ++ P W IS A
Sbjct: 206 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRK 268
K L+ ++L+ DP RIT+ + PW ++
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 16/282 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQH 281
K I +LLV DP++R+TIQ ++ PW + T+ S H
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 289
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 16/282 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQH 281
K I +LLV DP++R+TIQ ++ PW + T+ S H
Sbjct: 248 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 289
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ GT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 246 VENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ GT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 246 VENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 16/282 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQH 281
K I +LLV DP++R+TIQ ++ PW + T+ S H
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 290
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ GT YVAPE+L+++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 246
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 247 VENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 16/282 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQH 281
K I +LLV DP++R+TIQ ++ PW + T+ S H
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 290
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 140/270 (51%), Gaps = 10/270 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ GT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWF----RKGFTRP 273
V +P RITI I + W+ +KG RP
Sbjct: 246 VENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP++R+TIQ ++ PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP++R+TIQ ++ PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP++R+TIQ ++ PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP++R+TIQ ++ PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP++R+TIQ ++ PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G T CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP++R+TIQ ++ PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + +E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I +LLV DP++R+TIQ ++ PW +
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y + +G+G++ +V Q T A K I K ++ +++ K+EI +M+ + HPN
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPN 84
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFCHSRGV 130
++ L E I++ ME GGELF +V R+ RE A + + ++SAV +CH V
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 131 SHRXXXXXX---XXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+HR + DFGL+A + + ++ T+ GTP YV+P+VL +G
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAA---RFKPGKMMRTKVGTPYYVSPQVL--EG 199
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYP--PW--ISTDAKRLI 243
G + D WS GV++YVLL G+ PF + K+ + F +P W +S A+ LI
Sbjct: 200 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLI 259
Query: 244 SKLLVSDPERRITIQSIMRVPWFRKGFT 271
+LL P++RIT + WF K +
Sbjct: 260 RRLLTKSPKQRITSLQALEHEWFEKQLS 287
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 137/268 (51%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y + +G+G++ +V Q T A K I K ++ +++ K+EI +M+ + HPN
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPN 67
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFCHSRGV 130
++ L E I++ ME GGELF +V R+ RE A + + ++SAV +CH V
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 131 SHRXXXXXX---XXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+HR + DFGL+A + + ++ T+ GTP YV+P+VL +G
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAA---RFKPGKMMRTKVGTPYYVSPQVL--EG 182
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYP--PW--ISTDAKRLI 243
G + D WS GV++YVLL G+ PF + K+ + F +P W +S A+ LI
Sbjct: 183 LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLI 242
Query: 244 SKLLVSDPERRITIQSIMRVPWFRKGFT 271
+LL P++RIT + WF K +
Sbjct: 243 RRLLTKSPKQRITSLQALEHEWFEKQLS 270
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 136/261 (52%), Gaps = 6/261 (2%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ + LG+G + +V +T E+VA+K++ D + E IK+EI + +++ H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHEN 65
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRGV 130
VV+ ++ +EY GGELF ++ + E A+++F QL++ V + H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+HR ISDFGL+ + + LL+ GT YVAPE+L+++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 191 SKADLWSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWISTDAK--RLISKLL 247
D+WSCG++L +LAG LP+ Q + Y + + PW D+ L+ K+L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL 245
Query: 248 VSDPERRITIQSIMRVPWFRK 268
V +P RITI I + W+ K
Sbjct: 246 VENPSARITIPDIKKDRWYNK 266
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV----GTAQYVSPELLTEK 207
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 208 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 267 LVLDATKRLGCEEM 280
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 147
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G T CGTP Y+APE++ KGY+
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYN 202
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 203 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 261
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 262 DLTKRFGNLKDGVNDIKNHKWF 283
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG + + ++ GT YV+PE+L +K
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KLLV D
Sbjct: 215 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 251 PERRITIQSI 260
+R+ + +
Sbjct: 274 ATKRLGCEEM 283
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 140/276 (50%), Gaps = 20/276 (7%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME-----QIKREIS 62
L +Y M + LG G +V + T + VAIK+I+K + E ++ EI
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISA 121
+++ + HP +++++ + ++ +E ++GGELF KV RL+E + YF Q++ A
Sbjct: 68 ILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXX---XXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
V + H G+ HR I+DFG S + L L+ T CGTP Y+
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYL 183
Query: 179 APEVLRKKGYDG--SKADLWSCGVILYVLLAGFLPFQDENI-MNMYRKVFKAEFVYPP-- 233
APEVL G G D WS GVIL++ L+G+ PF + +++ ++ ++ + P
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 234 W--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
W +S A L+ KLLV DP+ R T + +R PW +
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG + + ++ GT YV+PE+L +K
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KLLV D
Sbjct: 211 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 251 PERRITIQSI 260
+R+ + +
Sbjct: 270 ATKRLGCEEM 279
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 16/282 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y+ G LG G FA V ++ TG A K I K + K + E I+RE+S+++ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFCHS 127
HPNV+ L EV K + + E V GGELF +A + L E+ A ++ +Q+++ V + HS
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
++H I DFGL+ ++ GTP +VAPE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTDA 239
+ G +AD+WS GVI Y+LL+G PF + E + N+ ++ E Y S A
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQH 281
K I +LLV DP++R+TIQ ++ PW + T+ S H
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 290
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 140/276 (50%), Gaps = 20/276 (7%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME-----QIKREIS 62
L +Y M + LG G +V + T + VAIK+I+K + E ++ EI
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISA 121
+++ + HP +++++ + ++ +E ++GGELF KV RL+E + YF Q++ A
Sbjct: 68 ILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXX---XXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
V + H G+ HR I+DFG S + L L+ T CGTP Y+
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYL 183
Query: 179 APEVLRKKGYDG--SKADLWSCGVILYVLLAGFLPFQDENI-MNMYRKVFKAEFVYPP-- 233
APEVL G G D WS GVIL++ L+G+ PF + +++ ++ ++ + P
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 234 W--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
W +S A L+ KLLV DP+ R T + +R PW +
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 212
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 213 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKL 271
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 272 LVLDATKRLGCEEM 285
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 134/259 (51%), Gaps = 8/259 (3%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV-RHPNV 72
+ ++LGKG+F KV+ + T + AIK + KD + + +E E V+ L HP +
Sbjct: 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 73 VELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF--QQLISAVDFCHSRGV 130
+ TK+ +F MEY+ GG+L + + DL+R F ++I + F HS+G+
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGI 139
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
+R I+DFG+ E + D + CGTP Y+APE+L + Y+
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQKYNH 197
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
S D WS GV+LY +L G PF ++ ++ + YP W+ +AK L+ KL V +
Sbjct: 198 S-VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVRE 256
Query: 251 PERRITIQSIMRV-PWFRK 268
PE+R+ ++ +R P FR+
Sbjct: 257 PEKRLGVRGDIRQHPLFRE 275
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 140/276 (50%), Gaps = 20/276 (7%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME-----QIKREIS 62
L +Y M + LG G +V + T + VAIK+I+K + E ++ EI
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISA 121
+++ + HP +++++ + ++ +E ++GGELF KV RL+E + YF Q++ A
Sbjct: 67 ILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 125
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXX---XXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
V + H G+ HR I+DFG S + L L+ T CGTP Y+
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYL 182
Query: 179 APEVLRKKGYDG--SKADLWSCGVILYVLLAGFLPFQDENI-MNMYRKVFKAEFVYPP-- 233
APEVL G G D WS GVIL++ L+G+ PF + +++ ++ ++ + P
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 242
Query: 234 W--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
W +S A L+ KLLV DP+ R T + +R PW +
Sbjct: 243 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 31/291 (10%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEF-------------- 52
V +Y + +GKG++ V A+KV++K +L ++
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 53 ---------MMEQIKREISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKV 101
+EQ+ +EI++++ + HPNVV+L EV+ + +++ E V G +
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129
Query: 102 ARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQ 161
L ED AR YFQ LI +++ H + + HR I+DFG+S E
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN--EF 187
Query: 162 LRNDGLLHTQCGTPAYVAPEVLR--KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMN 219
+D LL GTPA++APE L +K + G D+W+ GV LY + G PF DE IM
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 220 MYRKVFKAEFVYP--PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
++ K+ +P P I+ D K LI+++L +PE RI + I PW +
Sbjct: 248 LHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 140/276 (50%), Gaps = 20/276 (7%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME-----QIKREIS 62
L +Y M + LG G +V + T + VAIK+I+K + E ++ EI
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISA 121
+++ + HP +++++ + ++ +E ++GGELF KV RL+E + YF Q++ A
Sbjct: 68 ILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXX---XXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
V + H G+ HR I+DFG S + L L+ T CGTP Y+
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYL 183
Query: 179 APEVLRKKGYDG--SKADLWSCGVILYVLLAGFLPFQDENI-MNMYRKVFKAEFVYPP-- 233
APEVL G G D WS GVIL++ L+G+ PF + +++ ++ ++ + P
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 234 W--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
W +S A L+ KLLV DP+ R T + +R PW +
Sbjct: 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 140/276 (50%), Gaps = 20/276 (7%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME-----QIKREIS 62
L +Y M + LG G +V + T + VAIK+I+K + E ++ EI
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISA 121
+++ + HP +++++ + ++ +E ++GGELF KV RL+E + YF Q++ A
Sbjct: 74 ILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 132
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXX---XXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
V + H G+ HR I+DFG S + L L+ T CGTP Y+
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYL 189
Query: 179 APEVLRKKGYDG--SKADLWSCGVILYVLLAGFLPFQDENI-MNMYRKVFKAEFVYPP-- 233
APEVL G G D WS GVIL++ L+G+ PF + +++ ++ ++ + P
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 249
Query: 234 W--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
W +S A L+ KLLV DP+ R T + +R PW +
Sbjct: 250 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 207
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 208 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 267 LVLDATKRLGCEEM 280
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 191
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 192 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 250
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 251 LVLDATKRLGCEEM 264
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 185
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 186 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 244
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 245 LVLDATKRLGCEEM 258
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 206
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 207 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 265
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 266 LVLDATKRLGCEEM 279
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 209
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 210 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 268
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 269 LVLDATKRLGCEEM 282
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 184
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 185 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 243
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 244 LVLDATKRLGCEEM 257
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 186
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 187 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 245
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 246 LVLDATKRLGCEEM 259
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 207
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 208 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 267 LVLDATKRLGCEEM 280
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 209
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 210 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 268
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 269 LVLDATKRLGCEEM 282
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 210
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 211 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 269
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 270 LVLDATKRLGCEEM 283
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 214
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 215 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 273
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 274 LVLDATKRLGCEEM 287
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 12/270 (4%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQ----IKREISV 63
L GKY MG LLG+G++ KV K+++ E++ + + + KK + +K+EI +
Sbjct: 3 LIGKYLMGDLLGEGSYGKV---KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQL 59
Query: 64 MRLVRHPNVVELREVMAT--KKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLI 119
+R +RH NV++L +V+ K+K+++ MEY G E+ V R A YF QLI
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVA 179
+++ HS+G+ H+ IS G++ D T G+PA+
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 180 PEVLRK-KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTD 238
PE+ + G K D+WS GV LY + G PF+ +NI ++ + K + P
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPP 239
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWFRK 268
L+ +L +P +R +I+ I + WFRK
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 209
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 210 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 268
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 269 LVLDATKRLGCEEM 282
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 187
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 188 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 246
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 247 LVLDATKRLGCEEM 260
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 20/276 (7%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME-----QIKREIS 62
L +Y M + LG G +V + T + VAI++I+K + E ++ EI
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISA 121
+++ + HP +++++ + ++ +E ++GGELF KV RL+E + YF Q++ A
Sbjct: 193 ILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 251
Query: 122 VDFCHSRGVSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
V + H G+ HR I+DFG S + L L+ T CGTP Y+
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYL 308
Query: 179 APEVLRKKGYDGSK--ADLWSCGVILYVLLAGFLPFQDENI-MNMYRKVFKAEFVYPP-- 233
APEVL G G D WS GVIL++ L+G+ PF + +++ ++ ++ + P
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 368
Query: 234 W--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
W +S A L+ KLLV DP+ R T + +R PW +
Sbjct: 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 139/273 (50%), Gaps = 20/273 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME-----QIKREISVMR 65
+Y M + LG G +V + T + VAI++I+K + E ++ EI +++
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 209
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAVDF 124
+ HP +++++ + ++ +E ++GGELF KV RL+E + YF Q++ AV +
Sbjct: 210 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 125 CHSRGVSHRXXX---XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
H G+ HR I+DFG S + L L+ T CGTP Y+APE
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLAPE 325
Query: 182 VLRKKGYDGSK--ADLWSCGVILYVLLAGFLPFQDENI-MNMYRKVFKAEFVYPP--W-- 234
VL G G D WS GVIL++ L+G+ PF + +++ ++ ++ + P W
Sbjct: 326 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 385
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S A L+ KLLV DP+ R T + +R PW +
Sbjct: 386 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 133/249 (53%), Gaps = 8/249 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLM---TGESVAIKVINKDQLKKEFM-MEQIKREISVMRLV 67
+E+ R+LGKG + KV+ +++ TG+ A+KV+ K + + K E +++ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCH 126
+HP +V+L T K+++ +EY+ GGELF ++ R G ED A Y ++ A+ H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+G+ +R ++DFGL E + + + HT CGT Y+APE+L +
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
G++ + D WS G ++Y +L G PF EN K+ K + PP+++ +A+ L+ KL
Sbjct: 197 GHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKL 255
Query: 247 LVSDPERRI 255
L + R+
Sbjct: 256 LKRNAASRL 264
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 128/250 (51%), Gaps = 2/250 (0%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG + + + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK 213
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
S +DLW+ G I+Y L+AG PF+ N ++ K+ K E+ +P A+ L+ KLLV D
Sbjct: 214 S-SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 251 PERRITIQSI 260
+R+ + +
Sbjct: 273 ATKRLGCEEM 282
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 139/268 (51%), Gaps = 18/268 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y++G LG G FA V ++ TG A K I K Q + + E+I+RE+S++R V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHS 127
HPN++ L +V + + + +E V GGELF +A+ L E+ A + +Q++ V++ H+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL-LHTQCGTPAYVAPEV 182
+ ++H + DFGL+ E DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTD 238
+ + G +AD+WS GVI Y+LL+G PF + E + N+ + + + S
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWF 266
AK I KLLV + +R+TIQ +R PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K G L + + G E R Y +++SA+++ H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG + + ++ GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KLLV D
Sbjct: 214 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 251 PERRITIQSI 260
+R+ + +
Sbjct: 273 ATKRLGCEEM 282
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFGL+ R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 132/254 (51%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 207
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N +++K+ K E+ +P A+ L+ KL
Sbjct: 208 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKL 266
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 267 LVLDATKRLGCEEM 280
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFGL+ R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 132/254 (51%), Gaps = 10/254 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++ G++LG+G+F+ V ++L T AIK++ K + KE + + RE VM + HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGV 130
V+L +K++ + Y K GEL + + G E R Y +++SA+++ H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 SHRXXXXXXXXXXXXXXXXISDFG----LSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
HR I+DFG LS +Q R + + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEK 209
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
S +DLW+ G I+Y L+AG PF+ N ++ K+ K E+ +P A+ L+ KL
Sbjct: 210 SACKS-SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKL 268
Query: 247 LVSDPERRITIQSI 260
LV D +R+ + +
Sbjct: 269 LVLDATKRLGCEEM 282
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWF 297
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + +G G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIXNHKWF 298
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 132/249 (53%), Gaps = 8/249 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLM---TGESVAIKVINKDQLKKEFM-MEQIKREISVMRLV 67
+E+ R+LGKG + KV+ +++ TG+ A+KV+ K + + K E +++ V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCH 126
+HP +V+L T K+++ +EY+ GGELF ++ R G ED A Y ++ A+ H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+G+ +R ++DFGL E + + + H CGT Y+APE+L +
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKL 246
G++ + D WS G ++Y +L G PF EN K+ K + PP+++ +A+ L+ KL
Sbjct: 197 GHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKL 255
Query: 247 LVSDPERRI 255
L + R+
Sbjct: 256 LKRNAASRL 264
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 182
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 238 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 296
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 297 DLTKRFGNLKNGVNDIKNHKWF 318
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 154
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 210 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 268
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 269 DLTKRFGNLKNGVNDIKNHKWF 290
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 154
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 210 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 268
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 269 DLTKRFGNLKNGVNDIKNHKWF 290
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G T CGTP Y+APE++ KGY+ + D
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNKA-VD 241
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 301
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 302 FGNLKNGVNDIKNHKWF 318
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y GR LGKG FAK Y + T E A KV+ K L K E++ EI++ + + +P
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRG 129
+VV ++V +E + L R + + E AR + +Q I V + H+
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLRKKGY 188
V HR I DFGL+ ++ DG T CGTP Y+APEVL KKG+
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLV 248
+ D+WS G ILY LL G PF+ + Y ++ K E+ P I+ A LI ++L
Sbjct: 220 -SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH 278
Query: 249 SDPERRITIQSIMRVPWFRKGF 270
+DP R ++ ++ +F G+
Sbjct: 279 ADPTLRPSVAELLTDEFFTSGY 300
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 138/281 (49%), Gaps = 27/281 (9%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKV--INKDQLKKEFM---MEQIKREIS 62
+ KY+ ++G+G + V TG A+K+ + ++L E + E +RE
Sbjct: 92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH 151
Query: 63 VMRLVR-HPNVVELREVMATKKKIFVAMEYVKGGELF----AKVARGRLREDLARKYFQQ 117
++R V HP+++ L + + +F+ + ++ GELF KVA L E R +
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA---LSEKETRSIMRS 208
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
L+ AV F H+ + HR +SDFG S L L CGTP Y
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSC---HLEPGEKLRELCGTPGY 265
Query: 178 VAPEVLR------KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY 231
+APE+L+ GY G + DLW+CGVIL+ LLAG PF + M R + + ++ +
Sbjct: 266 LAPEILKCSMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQF 324
Query: 232 --PPWI--STDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
P W S+ K LIS+LL DPE R+T + ++ P+F +
Sbjct: 325 SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 125/264 (47%), Gaps = 7/264 (2%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LGKG FAK + T E A K++ K L K E++ EIS+ R + H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXXX 136
+FV +E + L R + L E AR Y +Q++ + H V HR
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 137 XXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
I DFGL+ ++ DG T CGTP Y+APEVL KKG+ + D+
Sbjct: 145 LGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKGH-SFEVDV 200
Query: 196 WSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRI 255
WS G I+Y LL G PF+ + Y ++ K E+ P I+ A LI K+L +DP R
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 256 TIQSIMRVPWFRKGFTRPVAFSIT 279
TI ++ +F G+ P IT
Sbjct: 261 TINELLNDEFFTSGYI-PARLPIT 283
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 125/264 (47%), Gaps = 7/264 (2%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LGKG FAK + T E A K++ K L K E++ EIS+ R + H +VV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXXX 136
+FV +E + L R + L E AR Y +Q++ + H V HR
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 137 XXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
I DFGL+ ++ DG T CGTP Y+APEVL KKG+ + D+
Sbjct: 149 LGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKGH-SFEVDV 204
Query: 196 WSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRI 255
WS G I+Y LL G PF+ + Y ++ K E+ P I+ A LI K+L +DP R
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 264
Query: 256 TIQSIMRVPWFRKGFTRPVAFSIT 279
TI ++ +F G+ P IT
Sbjct: 265 TINELLNDEFFTSGYI-PARLPIT 287
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 125/264 (47%), Gaps = 7/264 (2%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LGKG FAK + T E A K++ K L K E++ EIS+ R + H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXXX 136
+FV +E + L R + L E AR Y +Q++ + H V HR
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 137 XXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
I DFGL+ ++ DG T CGTP Y+APEVL KKG+ + D+
Sbjct: 145 LGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKGH-SFEVDV 200
Query: 196 WSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRI 255
WS G I+Y LL G PF+ + Y ++ K E+ P I+ A LI K+L +DP R
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 260
Query: 256 TIQSIMRVPWFRKGFTRPVAFSIT 279
TI ++ +F G+ P IT
Sbjct: 261 TINELLNDEFFTSGYI-PARLPIT 283
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+ +L +++ MEY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+ +L +++ MEY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+ +L +++ MEY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + LG G+F +V K TG A+K+++K ++ K +E E +++ V P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + +G G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEY+ GG++F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 6/262 (2%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y GR LGKG FAK Y + T E A KV+ K L K E++ EI++ + + +P
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 86
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRG 129
+VV ++V +E + L R + + E AR + +Q I V + H+
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ-CGTPAYVAPEVLRKKGY 188
V HR I DFGL+ ++ DG CGTP Y+APEVL KKG+
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLV 248
+ D+WS G ILY LL G PF+ + Y ++ K E+ P I+ A LI ++L
Sbjct: 204 -SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH 262
Query: 249 SDPERRITIQSIMRVPWFRKGF 270
+DP R ++ ++ +F G+
Sbjct: 263 ADPTLRPSVAELLTDEFFTSGY 284
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E + +G G+F +V K + TG A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEY+ GG++F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 135/268 (50%), Gaps = 25/268 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR-HPNVVELR 76
LG+G+F+ + ++ A+K+I+K M ++EI+ ++L HPN+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLH 72
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXX 135
EV + F+ ME + GGELF ++ + + E A ++L+SAV H GV HR
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL 132
Query: 136 XXXX---XXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSK 192
I DFG + L + ++ L T C T Y APE+L + GYD S
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAPELLNQNGYDES- 189
Query: 193 ADLWSCGVILYVLLAGFLPFQDEN-------IMNMYRKVFKAEFVY--PPW--ISTDAKR 241
DLWS GVILY +L+G +PFQ + + + +K+ K +F + W +S +AK
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249
Query: 242 LISKLLVSDPERRITIQSIMRVPWFRKG 269
LI LL DP +R+ + + W + G
Sbjct: 250 LIQGLLTVDPNKRLKMSGLRYNEWLQDG 277
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 6/262 (2%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y GR LGKG FAK Y + T E A KV+ K L K E++ EI++ + + +P
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRG 129
+VV ++V +E + L R + + E AR + +Q I V + H+
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ-CGTPAYVAPEVLRKKGY 188
V HR I DFGL+ ++ DG CGTP Y+APEVL KKG+
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLV 248
+ D+WS G ILY LL G PF+ + Y ++ K E+ P I+ A LI ++L
Sbjct: 220 -SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH 278
Query: 249 SDPERRITIQSIMRVPWFRKGF 270
+DP R ++ ++ +F G+
Sbjct: 279 ADPTLRPSVAELLTDEFFTSGY 300
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 138/268 (51%), Gaps = 18/268 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y++G LG G FA V ++ TG A K I K Q + + E+I+RE+S++R V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHS 127
H NV+ L +V + + + +E V GGELF +A+ L E+ A + +Q++ V++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL-LHTQCGTPAYVAPEV 182
+ ++H + DFGL+ E DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTD 238
+ + G +AD+WS GVI Y+LL+G PF + E + N+ + + + S
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWF 266
AK I KLLV + +R+TIQ +R PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 138/268 (51%), Gaps = 18/268 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y++G LG G FA V ++ TG A K I K Q + + E+I+RE+S++R V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHS 127
H NV+ L +V + + + +E V GGELF +A+ L E+ A + +Q++ V++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL-LHTQCGTPAYVAPEV 182
+ ++H + DFGL+ E DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTD 238
+ + G +AD+WS GVI Y+LL+G PF + E + N+ + + + S
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWF 266
AK I KLLV + +R+TIQ +R PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 138/267 (51%), Gaps = 18/267 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y++G LG G FA V ++ TG A K I K Q + + E+I+RE+S++R V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHS 127
H NV+ L +V + + + +E V GGELF +A+ L E+ A + +Q++ V++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL-LHTQCGTPAYVAPEV 182
+ ++H + DFGL+ E DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTD 238
+ + G +AD+WS GVI Y+LL+G PF + E + N+ + + + S
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPW 265
AK I KLLV + +R+TIQ +R PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 136/266 (51%), Gaps = 20/266 (7%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R LG G F V+ ++ +G IK INKD + + MEQI+ EI V++ + HPN++++
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKD--RSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 76 REVMATKKKIFVAMEYVKGGELFAKV----ARGR-LREDLARKYFQQLISAVDFCHSRGV 130
EV +++ ME +GGEL ++ ARG+ L E + +Q+++A+ + HS+ V
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 131 SHRXXXXXX---XXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
H+ I DFGL+ L ++D GT Y+APEV ++
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAEL---FKSDEHSTNAAGTALYMAPEVFKRDV 202
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYP----PWISTDAKRLI 243
K D+WS GV++Y LL G LPF ++ + +K E Y P ++ A L+
Sbjct: 203 --TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLL 259
Query: 244 SKLLVSDPERRITIQSIMRVPWFRKG 269
++L DPERR + ++ WF++
Sbjct: 260 KQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 221
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 282 FGNLKNGVNDIKNHKWF 298
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 6/262 (2%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y GR LGKG FAK Y + T E A KV+ K L K E++ EI++ + + +P
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRG 129
+VV ++V +E + L R + + E AR + +Q I V + H+
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ-CGTPAYVAPEVLRKKGY 188
V HR I DFGL+ ++ DG CGTP Y+APEVL KKG+
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLV 248
+ D+WS G ILY LL G PF+ + Y ++ K E+ P I+ A LI ++L
Sbjct: 220 -SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLH 278
Query: 249 SDPERRITIQSIMRVPWFRKGF 270
+DP R ++ ++ +F G+
Sbjct: 279 ADPTLRPSVAELLTDEFFTSGY 300
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 138/268 (51%), Gaps = 18/268 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y++G LG G FA V ++ TG A K I K Q + + E+I+RE+S++R V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHS 127
H NV+ L +V + + + +E V GGELF +A+ L E+ A + +Q++ V++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL-LHTQCGTPAYVAPEV 182
+ ++H + DFGL+ E DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTD 238
+ + G +AD+WS GVI Y+LL+G PF + E + N+ + + + S
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWF 266
AK I KLLV + +R+TIQ +R PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 138/268 (51%), Gaps = 18/268 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK---KEFMMEQIKREISVMRLVR 68
Y++G LG G FA V ++ TG A K I K Q + + E+I+RE+S++R V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHS 127
H NV+ L +V + + + +E V GGELF +A+ L E+ A + +Q++ V++ H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 128 RGVSH----RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL-LHTQCGTPAYVAPEV 182
+ ++H + DFGL+ E DG+ GTP +VAPE+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKVFKAEFVYPPWISTD 238
+ + G +AD+WS GVI Y+LL+G PF + E + N+ + + + S
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWF 266
AK I KLLV + +R+TIQ +R PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLPNGVNDIKNHKWF 297
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 122/252 (48%), Gaps = 5/252 (1%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVM- 64
H + +++GKG+F KV + A+KV+ K + K+ + I E +V+
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 65 RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVD 123
+ V+HP +V L T K++ ++Y+ GGELF + R R E AR Y ++ SA+
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153
Query: 124 FCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
+ HS + +R ++DFGL E + ++ T CGTP Y+APEVL
Sbjct: 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLI 243
K+ YD + D W G +LY +L G PF N MY + P I+ A+ L+
Sbjct: 212 HKQPYDRT-VDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLL 270
Query: 244 SKLLVSDPERRI 255
LL D +R+
Sbjct: 271 EGLLQKDRTKRL 282
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 124/264 (46%), Gaps = 7/264 (2%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LGKG FAK + T E A K++ K L K E++ EIS+ R + H +VV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXXX 136
+FV +E + L R + L E AR Y +Q++ + H V HR
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 137 XXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
I DFGL+ ++ DG CGTP Y+APEVL KKG+ + D+
Sbjct: 167 LGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKVLCGTPNYIAPEVLSKKGH-SFEVDV 222
Query: 196 WSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRI 255
WS G I+Y LL G PF+ + Y ++ K E+ P I+ A LI K+L +DP R
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 282
Query: 256 TIQSIMRVPWFRKGFTRPVAFSIT 279
TI ++ +F G+ P IT
Sbjct: 283 TINELLNDEFFTSGYI-PARLPIT 305
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 124/264 (46%), Gaps = 7/264 (2%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LGKG FAK + T E A K++ K L K E++ EIS+ R + H +VV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXXX 136
+FV +E + L R + L E AR Y +Q++ + H V HR
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 137 XXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
I DFGL+ ++ DG CGTP Y+APEVL KKG+ + D+
Sbjct: 169 LGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKVLCGTPNYIAPEVLSKKGH-SFEVDV 224
Query: 196 WSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRI 255
WS G I+Y LL G PF+ + Y ++ K E+ P I+ A LI K+L +DP R
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARP 284
Query: 256 TIQSIMRVPWFRKGFTRPVAFSIT 279
TI ++ +F G+ P IT
Sbjct: 285 TINELLNDEFFTSGYI-PARLPIT 307
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 241
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 301
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 302 FGNLKNGVNDIKNHKWF 318
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIISKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 137/268 (51%), Gaps = 23/268 (8%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ +G G+++ T A+K+I+K K E+I EI ++R +HPN
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK---SKRDPTEEI--EI-LLRYGQHPN 77
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGV 130
++ L++V K ++V E +KGGEL K+ R + E A + V++ H++GV
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 131 SHRXXXXXXXXXXXXX----XXXISDFGLSALPEQLR-NDGLLHTQCGTPAYVAPEVLRK 185
HR I DFG + +QLR +GLL T C T +VAPEVL +
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFA---KQLRAENGLLMTPCYTANFVAPEVLER 194
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQ---DENIMNMYRKVFKAEFV----YPPWISTD 238
+GYD + D+WS GV+LY +L G+ PF D+ + ++ +F Y +S
Sbjct: 195 QGYDAA-CDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWF 266
AK L+SK+L DP +R+T ++R PW
Sbjct: 254 AKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 161
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 215
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 275
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 276 FGNLKNGVNDIKNHKWF 292
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 124/265 (46%), Gaps = 7/265 (2%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LGKG FAK + T E A K++ K L K E++ EIS+ R + H +VV
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXX 135
+FV +E + L R + L E AR Y +Q++ + H V HR
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDG-LLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
I DFGL+ ++ DG CGTP Y+APEVL KKG+ + D
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKVLCGTPNYIAPEVLSKKGH-SFEVD 197
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
+WS G I+Y LL G PF+ + Y ++ K E+ P I+ A LI K+L +DP R
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 257
Query: 255 ITIQSIMRVPWFRKGFTRPVAFSIT 279
TI ++ +F G+ P IT
Sbjct: 258 PTINELLNDEFFTSGYI-PARLPIT 281
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 127/262 (48%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
++E R LG G+F +V K TG A+K+++K ++ K +E E + + V P
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFP 102
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ +EY GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+++ + LG G+F +V K +G A+K+++K ++ K +E E +++ V P
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 88
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 148
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP Y+APE++ KGY+
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 203
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 204 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 262
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 263 DLTKRFGNLKNGVNDIKNHKWF 284
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 7/236 (2%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 23/268 (8%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ +G G+++ T A+K+I+K K E+I EI ++R +HPN
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDK---SKRDPTEEI--EI-LLRYGQHPN 77
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGV 130
++ L++V K ++V E KGGEL K+ R + E A + V++ H++GV
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 131 SHRXXXXXXXXXXXXX----XXXISDFGLSALPEQLR-NDGLLHTQCGTPAYVAPEVLRK 185
HR I DFG + +QLR +GLL T C T +VAPEVL +
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFA---KQLRAENGLLXTPCYTANFVAPEVLER 194
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQ---DENIMNMYRKVFKAEFV----YPPWISTD 238
+GYD + D+WS GV+LY L G+ PF D+ + ++ +F Y +S
Sbjct: 195 QGYDAA-CDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDT 253
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWF 266
AK L+SK L DP +R+T ++R PW
Sbjct: 254 AKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G CGTP Y+AP ++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 140/270 (51%), Gaps = 23/270 (8%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y + +G G++++ T A+KVI+K K E+I EI ++R +HPN
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK---SKRDPSEEI--EI-LLRYGQHPN 82
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLIS-AVDFCHSRGV 130
++ L++V K +++ E ++GGEL K+ R + + + I V++ HS+GV
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 131 SHRXXXXXXXXXXXXX----XXXISDFGLSALPEQLR-NDGLLHTQCGTPAYVAPEVLRK 185
HR I DFG + +QLR +GLL T C T +VAPEVL++
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFA---KQLRAENGLLMTPCYTANFVAPEVLKR 199
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQD---ENIMNMYRKVFKAEFVYP--PW--ISTD 238
+GYD D+WS G++LY +LAG+ PF + + + ++ +F W +S
Sbjct: 200 QGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWFRK 268
AK L+SK+L DP +R+T + +++ PW +
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 140/248 (56%), Gaps = 8/248 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLM---TGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
+E+ ++LG+G+F KV+ +++ +G A+KV+ K LK + + K E ++ V
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILADVN 88
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFCHS 127
HP VV+L T+ K+++ +++++GG+LF ++++ + E+ + Y +L +D HS
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
G+ +R ++DFGLS E + ++ ++ CGT Y+APEV+ ++G
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLL 247
+ S AD WS GV+++ +L G LPFQ ++ + KA+ P ++ST+A+ L+ L
Sbjct: 207 HSHS-ADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALF 265
Query: 248 VSDPERRI 255
+P R+
Sbjct: 266 KRNPANRL 273
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 140/270 (51%), Gaps = 23/270 (8%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y + +G G++++ T A+KVI+K K E+I EI ++R +HPN
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEI--EI-LLRYGQHPN 82
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLIS-AVDFCHSRGV 130
++ L++V K +++ E ++GGEL K+ R + + + I V++ HS+GV
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 131 SHRXXXXXXXXXXXXX----XXXISDFGLSALPEQLR-NDGLLHTQCGTPAYVAPEVLRK 185
HR I DFG + +QLR +GLL T C T +VAPEVL++
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFA---KQLRAENGLLMTPCYTANFVAPEVLKR 199
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQD---ENIMNMYRKVFKAEFVYP--PW--ISTD 238
+GYD D+WS G++LY +LAG+ PF + + + ++ +F W +S
Sbjct: 200 QGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 239 AKRLISKLLVSDPERRITIQSIMRVPWFRK 268
AK L+SK+L DP +R+T + +++ PW +
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 145/250 (58%), Gaps = 10/250 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGES---VAIKVINKDQLK-KEFMMEQIKREISVMRL 66
++E+ ++LG+G+F KV+ K++ ++ A+KV+ K LK ++ + +++R+I V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-- 82
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
V HP +V+L T+ K+++ +++++GG+LF ++++ + E+ + Y +L A+D
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS G+ +R ++DFGLS E + ++ ++ CGT Y+APEV+ +
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+G+ S AD WS GV+++ +L G LPFQ ++ + KA+ P ++S +A+ L+
Sbjct: 201 RGHTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRM 259
Query: 246 LLVSDPERRI 255
L +P R+
Sbjct: 260 LFKRNPANRL 269
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 12/262 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+++ + LG G+F +V K +G A+K+++K ++ K +E E +++ V P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++DFG + R G CGTP +APE++ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIILSKGYN 216
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
+ D W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 250 DPERRI-----TIQSIMRVPWF 266
D +R + I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 145/250 (58%), Gaps = 10/250 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGES---VAIKVINKDQLK-KEFMMEQIKREISVMRL 66
++E+ ++LG+G+F KV+ K++ ++ A+KV+ K LK ++ + +++R+I V
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-- 83
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
V HP +V+L T+ K+++ +++++GG+LF ++++ + E+ + Y +L A+D
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS G+ +R ++DFGLS E + ++ ++ CGT Y+APEV+ +
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+G+ S AD WS GV+++ +L G LPFQ ++ + KA+ P ++S +A+ L+
Sbjct: 202 RGHTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRM 260
Query: 246 LLVSDPERRI 255
L +P R+
Sbjct: 261 LFKRNPANRL 270
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 145/250 (58%), Gaps = 10/250 (4%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGES---VAIKVINKDQLK-KEFMMEQIKREISVMRL 66
++E+ ++LG+G+F KV+ K++ ++ A+KV+ K LK ++ + +++R+I V
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-- 82
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRL-REDLARKYFQQLISAVDFC 125
V HP +V+L T+ K+++ +++++GG+LF ++++ + E+ + Y +L A+D
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS G+ +R ++DFGLS E + ++ ++ CGT Y+APEV+ +
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+G+ S AD WS GV+++ +L G LPFQ ++ + KA+ P ++S +A+ L+
Sbjct: 201 RGHTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRM 259
Query: 246 LLVSDPERRI 255
L +P R+
Sbjct: 260 LFKRNPANRL 269
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G GTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 12/257 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
+ LG G+F +V K +G A+K+++K ++ K +E E +++ V P +V+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+++ MEYV GGE+F+ + R GR E AR Y Q++ ++ HS + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG + R G GTP Y+APE++ KGY+ + D
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSKGYNKA-VD 220
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV++Y + AG+ PF + + +Y K+ + +P S+D K L+ LL D +R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 255 I-----TIQSIMRVPWF 266
+ I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 122/272 (44%), Gaps = 16/272 (5%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMR 65
HVL Y++ LG G F V+ + TG + A K + E E +++EI M
Sbjct: 48 HVL-DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMS 103
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA--RGRLREDLARKYFQQLISAVD 123
++RHP +V L + ++ + E++ GGELF KVA ++ ED A +Y +Q+ +
Sbjct: 104 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 163
Query: 124 FCHSRGVSHRXXXXXXXXXXXXXXXXIS--DFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
H H + DFGL+A L + GT + APE
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA---HLDPKQSVKVTTGTAEFAAPE 220
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYP----PWIST 237
V K G D+WS GV+ Y+LL+G PF EN R V ++ IS
Sbjct: 221 VAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 279
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFRKG 269
D K I KLL++DP R+TI + PW G
Sbjct: 280 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 311
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 122/272 (44%), Gaps = 16/272 (5%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMR 65
HVL Y++ LG G F V+ + TG + A K + E E +++EI M
Sbjct: 154 HVL-DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMS 209
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA--RGRLREDLARKYFQQLISAVD 123
++RHP +V L + ++ + E++ GGELF KVA ++ ED A +Y +Q+ +
Sbjct: 210 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 269
Query: 124 FCHSRGVSHRXXXXXXXXXXXXXXXXIS--DFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
H H + DFGL+A L + GT + APE
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA---HLDPKQSVKVTTGTAEFAAPE 326
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYP----PWIST 237
V K G D+WS GV+ Y+LL+G PF EN R V ++ IS
Sbjct: 327 VAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 385
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFRKG 269
D K I KLL++DP R+TI + PW G
Sbjct: 386 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 417
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 24/282 (8%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIK------- 58
H + YE +LG+G + V T + A+K+I+ F E+++
Sbjct: 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTG-GGSFSAEEVQELREATL 71
Query: 59 REISVMRLVR-HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQ 116
+E+ ++R V HPN+++L++ T F+ + +K GELF + + L E RK +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA 176
L+ + H + HR ++DFG S QL L + CGTP+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC---QLDPGEKLRSVCGTPS 188
Query: 177 YVAPEVLR------KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFV 230
Y+APE++ GY G + D+WS GVI+Y LLAG PF M M R + +
Sbjct: 189 YLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247
Query: 231 Y--PPW--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
+ P W S K L+S+ LV P++R T + + P+F++
Sbjct: 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 24/282 (8%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIK------- 58
H + YE +LG+G + V T + A+K+I+ F E+++
Sbjct: 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTG-GGSFSAEEVQELREATL 71
Query: 59 REISVMRLVR-HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQ 116
+E+ ++R V HPN+++L++ T F+ + +K GELF + + L E RK +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA 176
L+ + H + HR ++DFG S QL L CGTP+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC---QLDPGEKLREVCGTPS 188
Query: 177 YVAPEVLR------KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFV 230
Y+APE++ GY G + D+WS GVI+Y LLAG PF M M R + +
Sbjct: 189 YLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247
Query: 231 Y--PPW--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
+ P W S K L+S+ LV P++R T + + P+F++
Sbjct: 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 137/274 (50%), Gaps = 20/274 (7%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVM-RLVRHP 70
+++ R++G+G++AKV + T A++V+ K+ + + ++ ++ E V + HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRG 129
+V L T+ ++F +EYV GG+L + R R L E+ AR Y ++ A+++ H RG
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++D+G+ E LR T CGTP Y+APE+LR + Y
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDY- 230
Query: 190 GSKADLWSCGVILYVLLAGFLPFQ--------DENIMN-MYRKVFKAEFVYPPWISTDAK 240
G D W+ GV+++ ++AG PF D+N + +++ + + + P +S A
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 290
Query: 241 RLISKLLVSDPERRITIQ------SIMRVPWFRK 268
++ L DP+ R+ I P+FR
Sbjct: 291 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 24/280 (8%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIK-------RE 60
+ YE +LG+G + V T + A+K+I+ F E+++ +E
Sbjct: 2 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTG-GGSFSAEEVQELREATLKE 60
Query: 61 ISVMRLVR-HPNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQL 118
+ ++R V HPN+++L++ T F+ + +K GELF + + L E RK + L
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
+ + H + HR ++DFG S QL L CGTP+Y+
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC---QLDPGEKLREVCGTPSYL 177
Query: 179 APEVLR------KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVY- 231
APE++ GY G + D+WS GVI+Y LLAG PF M M R + + +
Sbjct: 178 APEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 236
Query: 232 -PPW--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
P W S K L+S+ LV P++R T + + P+F++
Sbjct: 237 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 5/241 (2%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV-RHPNVVEL 75
+LGKG+F KV + T E AIK++ KD + ++ +E E V+ L+ + P + +L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
T +++ MEYV GG+L + + G+ +E A Y ++ + F H RG+ +R
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRD 145
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
I+DFG+ E + + CGTP Y+APE++ + Y G D
Sbjct: 146 LKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPEIIAYQPY-GKSVD 202
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV+LY +LAG PF E+ +++ + + YP +S +A + L+ P +R
Sbjct: 203 WWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKR 262
Query: 255 I 255
+
Sbjct: 263 L 263
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 122/241 (50%), Gaps = 5/241 (2%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV-RHPNVVEL 75
+LGKG+F KV ++ T E A+K++ KD + ++ +E E V+ L + P + +L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
T +++ MEYV GG+L + + GR +E A Y ++ + F S+G+ +R
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
I+DFG+ E + + CGTP Y+APE++ + Y G D
Sbjct: 468 LKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GKSVD 524
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV+LY +LAG PF+ E+ +++ + + YP +S +A + L+ P +R
Sbjct: 525 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 584
Query: 255 I 255
+
Sbjct: 585 L 585
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 122/241 (50%), Gaps = 5/241 (2%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV-RHPNVVEL 75
+LGKG+F KV ++ T E A+K++ KD + ++ +E E V+ L + P + +L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
T +++ MEYV GG+L + + GR +E A Y ++ + F S+G+ +R
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 146
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
I+DFG+ E + + CGTP Y+APE++ + Y G D
Sbjct: 147 LKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GKSVD 203
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERR 254
W+ GV+LY +LAG PF+ E+ +++ + + YP +S +A + L+ P +R
Sbjct: 204 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKR 263
Query: 255 I 255
+
Sbjct: 264 L 264
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 20/274 (7%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVM-RLVRHP 70
+++ R++G+G++AKV + T A+KV+ K+ + + ++ ++ E V + HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRG 129
+V L T+ ++F +EYV GG+L + R R L E+ AR Y ++ A+++ H RG
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++D+G+ E LR CGTP Y+APE+LR + Y
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDY- 187
Query: 190 GSKADLWSCGVILYVLLAGFLPFQ--------DENIMN-MYRKVFKAEFVYPPWISTDAK 240
G D W+ GV+++ ++AG PF D+N + +++ + + + P +S A
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 247
Query: 241 RLISKLLVSDPERRITIQ------SIMRVPWFRK 268
++ L DP+ R+ I P+FR
Sbjct: 248 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 20/274 (7%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVM-RLVRHP 70
+++ R++G+G++AKV + T A+KV+ K+ + + ++ ++ E V + HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRG 129
+V L T+ ++F +EYV GG+L + R R L E+ AR Y ++ A+++ H RG
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++D+G+ E LR CGTP Y+APE+LR + Y
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDY- 183
Query: 190 GSKADLWSCGVILYVLLAGFLPFQ--------DENIMN-MYRKVFKAEFVYPPWISTDAK 240
G D W+ GV+++ ++AG PF D+N + +++ + + + P +S A
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 243
Query: 241 RLISKLLVSDPERRITIQ------SIMRVPWFRK 268
++ L DP+ R+ I P+FR
Sbjct: 244 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 277
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 141/302 (46%), Gaps = 41/302 (13%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQ-LKKEFMMEQIKREI 61
++R +Y +G LLGKG F V+ G +L VAIKVI +++ L + + + +
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 62 SVMRLVR------HPNVVELREVMATKKKIFVAME-YVKGGELFAKVA-RGRLREDLARK 113
V L + HP V+ L + T++ + +E + +LF + +G L E +R
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC 143
Query: 114 YFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQC 172
+F Q+++A+ CHSRGV HR + DFG AL LH +
Sbjct: 144 FFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL---------LHDEP 194
Query: 173 -----GTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA 227
GT Y PE + + Y A +WS G++LY ++ G +PF+ + +++ +A
Sbjct: 195 YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEILEA 248
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFR-----------KGFTRPVAF 276
E +P +S D LI + L P R +++ I+ PW + KG P+A+
Sbjct: 249 ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPAPLAW 308
Query: 277 SI 278
S+
Sbjct: 309 SL 310
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 131/255 (51%), Gaps = 14/255 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVM-RLVRHP 70
+++ R++G+G++AKV + T A+KV+ K+ + + ++ ++ E V + HP
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRG 129
+V L T+ ++F +EYV GG+L + R R L E+ AR Y ++ A+++ H RG
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ +R ++D+G+ E LR CGTP Y+APE+LR + Y
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDY- 198
Query: 190 GSKADLWSCGVILYVLLAGFLPFQ--------DENIMN-MYRKVFKAEFVYPPWISTDAK 240
G D W+ GV+++ ++AG PF D+N + +++ + + + P +S A
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAA 258
Query: 241 RLISKLLVSDPERRI 255
++ L DP+ R+
Sbjct: 259 SVLKSFLNKDPKERL 273
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 134/275 (48%), Gaps = 22/275 (8%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME-----QIKREISVMR 65
KY LG G F V+ + V +K I K+++ ++ +E ++ EI+++
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 66 LVRHPNVVELREVMATKKKIFVAME-YVKGGELFAKVAR-GRLREDLARKYFQQLISAVD 123
V H N++++ ++ + + ME + G +LFA + R RL E LA F+QL+SAV
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 124 FCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
+ + + HR + DFG +A L L +T CGT Y APEVL
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA---YLERGKLFYTFCGTIEYCAPEVL 201
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW-ISTDAKRL 242
Y G + ++WS GV LY L+ F++ + V A ++PP+ +S + L
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLV-----FEENPFCELEETVEAA--IHPPYLVSKELMSL 254
Query: 243 ISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFS 277
+S LL PERR T++ ++ PW T+PV +
Sbjct: 255 VSGLLQPVPERRTTLEKLVTDPW----VTQPVNLA 285
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 19/267 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY + +G+G+F K K G IK IN ++ + E+ +RE++V+ ++HP
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANMKHP 83
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKV--ARGRL-REDLARKYFQQLISAVDFCHS 127
N+V+ RE +++ M+Y +GG+LF ++ +G L +ED +F Q+ A+ H
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC-GTPAYVAPEVLRKK 186
R + HR + DFG++ + L + L C GTP Y++PE+ K
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARV---LNSTVELARACIGTPYYLSPEICENK 200
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP---WISTDAKRLI 243
Y+ +K+D+W+ G +LY L F+ ++ N+ K+ F PP S D + L+
Sbjct: 201 PYN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF--PPVSLHYSYDLRSLV 257
Query: 244 SKLLVSDPERRITIQSIMRVPWFRKGF 270
S+L +P R ++ SI+ KGF
Sbjct: 258 SQLFKRNPRDRPSVNSIL-----EKGF 279
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 33/292 (11%)
Query: 2 EEERHVLFGKYEMGR-LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKRE 60
E +++ + Y++ + +LG G KV TG+ A+K++ + + ++E
Sbjct: 1 EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL--------YDSPKARQE 52
Query: 61 ISV-MRLVRHPNVVELREVMAT----KKKIFVAMEYVKGGELFAKVA-RG--RLREDLAR 112
+ + P++V + +V K+ + + ME ++GGELF+++ RG E A
Sbjct: 53 VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA 112
Query: 113 KYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLH 169
+ + + +A+ F HS ++HR + +DFG + E +N L
Sbjct: 113 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQN--ALQ 168
Query: 170 TQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIM----NMYRKVF 225
T C TP YVAPEVL + YD S D+WS GVI+Y+LL GF PF M R++
Sbjct: 169 TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 227
Query: 226 KAEFVYP--PW--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
++ +P W +S DAK+LI LL +DP R+TI M PW + P
Sbjct: 228 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVP 279
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 33/292 (11%)
Query: 2 EEERHVLFGKYEMGR-LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKRE 60
E +++ + Y++ + +LG G KV TG+ A+K++ + + ++E
Sbjct: 20 EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL--------YDSPKARQE 71
Query: 61 ISV-MRLVRHPNVVELREVMAT----KKKIFVAMEYVKGGELFAKVA-RG--RLREDLAR 112
+ + P++V + +V K+ + + ME ++GGELF+++ RG E A
Sbjct: 72 VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA 131
Query: 113 KYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLH 169
+ + + +A+ F HS ++HR + +DFG + E +N L
Sbjct: 132 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQN--ALQ 187
Query: 170 TQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIM----NMYRKVF 225
T C TP YVAPEVL + YD S D+WS GVI+Y+LL GF PF M R++
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 246
Query: 226 KAEFVYP--PW--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
++ +P W +S DAK+LI LL +DP R+TI M PW + P
Sbjct: 247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVP 298
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 135/259 (52%), Gaps = 20/259 (7%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLM---TGESVAIKVINKDQL-KKEFMMEQIKREISVMRLV 67
+E+ ++LG G + KV+ +++ TG+ A+KV+ K + +K E + E V+ +
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 68 RH-PNVVELREVMATKKKIFVAMEYVKGGELFAKVA-RGRLREDLARKYFQQLISAVDFC 125
R P +V L T+ K+ + ++Y+ GGELF ++ R R E + Y +++ A++
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 175
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS---ALPEQLRNDGLLHTQCGTPAYVAPEV 182
H G+ +R ++DFGLS E R + CGT Y+AP++
Sbjct: 176 HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA----YDFCGTIEYMAPDI 231
Query: 183 LR--KKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMN----MYRKVFKAEFVYPPWIS 236
+R G+D + D WS GV++Y LL G PF + N + R++ K+E YP +S
Sbjct: 232 VRGGDSGHDKA-VDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS 290
Query: 237 TDAKRLISKLLVSDPERRI 255
AK LI +LL+ DP++R+
Sbjct: 291 ALAKDLIQRLLMKDPKKRL 309
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 13/253 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ +++G+G F +V + T + A+K+++K ++ K E +M P
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVS 131
VV+L + +++ MEY+ GG+L ++ + E AR Y +++ A+D HS G
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 190
Query: 132 HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLH--TQCGTPAYVAPEVLRKK--- 186
HR ++DFG ++ +G++ T GTP Y++PEVL+ +
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF--KAEFVYPP--WISTDAKRL 242
GY G + D WS GV LY +L G PF ++++ Y K+ K +P IS +AK L
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 307
Query: 243 ISKLLVSDPERRI 255
I L +D E R+
Sbjct: 308 ICAFL-TDREVRL 319
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 13/253 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ +++G+G F +V + T + A+K+++K ++ K E +M P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVS 131
VV+L + +++ MEY+ GG+L ++ + E AR Y +++ A+D HS G
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 132 HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLH--TQCGTPAYVAPEVLRKK--- 186
HR ++DFG ++ +G++ T GTP Y++PEVL+ +
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF--KAEFVYPP--WISTDAKRL 242
GY G + D WS GV LY +L G PF ++++ Y K+ K +P IS +AK L
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 243 ISKLLVSDPERRI 255
I L +D E R+
Sbjct: 313 ICAFL-TDREVRL 324
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 16/268 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y++ +++G+G F +V + + + A+K+++K ++ K E +M P
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVS 131
VV+L K +++ MEY+ GG+L ++ + E A+ Y +++ A+D HS G+
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLI 196
Query: 132 HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLH--TQCGTPAYVAPEVLRKK--- 186
HR ++DFG ++ G++H T GTP Y++PEVL+ +
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCM---KMDETGMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF--KAEFVYP--PWISTDAKRL 242
GY G + D WS GV L+ +L G PF ++++ Y K+ K +P IS AK L
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNL 313
Query: 243 ISKLLVSDPERRI---TIQSIMRVPWFR 267
I L +D E R+ ++ I + P+F+
Sbjct: 314 ICAFL-TDREVRLGRNGVEEIKQHPFFK 340
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 13/253 (5%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ +++G+G F +V + T + A+K+++K ++ K E +M P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVS 131
VV+L + +++ MEY+ GG+L ++ + E AR Y +++ A+D HS G
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 132 HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLH--TQCGTPAYVAPEVLRKK--- 186
HR ++DFG ++ +G++ T GTP Y++PEVL+ +
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF--KAEFVYPP--WISTDAKRL 242
GY G + D WS GV LY +L G PF ++++ Y K+ K +P IS +AK L
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 243 ISKLLVSDPERRI 255
I L +D E R+
Sbjct: 313 ICAFL-TDREVRL 324
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 19/260 (7%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
+LG G F +V+ ++ TG +A K+I +K + E++K EISVM + H N+++L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK---EEVKNEISVMNQLDHANLIQLY 152
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARG--RLREDLARKYFQQLISAVDFCHSRGVSHRX 134
+ +K I + MEYV GGELF ++ L E + +Q+ + H + H
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 135 XXXXXXXXXXXXXXXIS--DFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD--G 190
I DFGL+ + + L GTP ++APEV+ YD
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLA---RRYKPREKLKVNFGTPEFLAPEVV---NYDFVS 266
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW----ISTDAKRLISKL 246
D+WS GVI Y+LL+G PF +N + + IS +AK ISKL
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKL 326
Query: 247 LVSDPERRITIQSIMRVPWF 266
L+ + RI+ ++ PW
Sbjct: 327 LIKEKSWRISASEALKHPWL 346
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 43/299 (14%)
Query: 8 LFGKYE-----MGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREIS 62
L GK+E LLG+G +AKV L G+ A+K+I K + ++ RE+
Sbjct: 6 LPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEK---QAGHSRSRVFREVE 62
Query: 63 VMRLVR-HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLIS 120
+ + + N++EL E + ++ E ++GG + A + + + E A + + + +
Sbjct: 63 TLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAA 122
Query: 121 AVDFCHSRGVSHRX---XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL------LHTQ 171
A+DF H++G++HR I DF L + +L N L T
Sbjct: 123 ALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGS-GMKLNNSCTPITTPELTTP 181
Query: 172 CGTPAYVAPEVLR----KKGYDGSKADLWSCGVILYVLLAGFLPF-----------QDEN 216
CG+ Y+APEV+ + + + DLWS GV+LY++L+G+ PF + E
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEV 241
Query: 217 IMNMYRKVF------KAEFVYPPW--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
K+F K EF W IS++AK LISKLLV D ++R++ +++ PW +
Sbjct: 242 CRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVM-RLVRHPNVV 73
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 73 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 124
Query: 74 ELREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCH 126
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + H
Sbjct: 125 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
S ++HR I +DFG + ++ + L T C TP YVAPEVL
Sbjct: 185 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVL 241
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--I 235
+ YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +
Sbjct: 242 GPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 300
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
S + K LI LL ++P +R+TI M PW + P
Sbjct: 301 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 338
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV-MRLVRHPNVV 73
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 118
Query: 74 ELREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCH 126
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + H
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
S ++HR I +DFG + ++ + L T C TP YVAPEVL
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVL 235
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--I 235
+ YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +
Sbjct: 236 GPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 294
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
S + K LI LL ++P +R+TI M PW + P
Sbjct: 295 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV-MRLVRHPNVV 73
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 29 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 80
Query: 74 ELREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCH 126
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + H
Sbjct: 81 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 140
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
S ++HR I +DFG + ++ + L T C TP YVAPEVL
Sbjct: 141 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVL 197
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--I 235
+ YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +
Sbjct: 198 GPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 256
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
S + K LI LL ++P +R+TI M PW + P
Sbjct: 257 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 294
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV-MRLVRHPNVV 73
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 27 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 78
Query: 74 ELREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCH 126
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + H
Sbjct: 79 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 138
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
S ++HR I +DFG + ++ + L T C TP YVAPEVL
Sbjct: 139 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVL 195
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--I 235
+ YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +
Sbjct: 196 GPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 254
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
S + K LI LL ++P +R+TI M PW + P
Sbjct: 255 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 292
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 31/277 (11%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV-MRLVRHPNVVE 74
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVR 89
Query: 75 LREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCHS 127
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + HS
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 149
Query: 128 RGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLR 184
++HR I +DFG + ++ + L T C TP YVAPEVL
Sbjct: 150 INIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLG 206
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--IS 236
+ YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +S
Sbjct: 207 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 265
Query: 237 TDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ K LI LL ++P +R+TI M PW + P
Sbjct: 266 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 302
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV-MRLVRHPNVV 73
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 22 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 73
Query: 74 ELREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCH 126
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + H
Sbjct: 74 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
S ++HR I +DFG + ++ + L T C TP YVAPEVL
Sbjct: 134 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVL 190
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--I 235
+ YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +
Sbjct: 191 GPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 249
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
S + K LI LL ++P +R+TI M PW + P
Sbjct: 250 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 287
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV-MRLVRHPNVV 73
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 74 ELREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCH 126
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
S ++HR I +DFG + ++ + L T C TP YVAPEVL
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVL 191
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--I 235
+ YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +
Sbjct: 192 GPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 250
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
S + K LI LL ++P +R+TI M PW + P
Sbjct: 251 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 21/273 (7%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
++LG G KV T E A+K++ +D K +E R +VR +V E
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKML-QDCPKARREVELHWRASQCPHIVRIVDVYE 79
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCHSRGVS 131
+ A +K + + ME + GGELF+++ RG E A + + + A+ + HS ++
Sbjct: 80 --NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 137
Query: 132 HRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
HR I +DFG + ++ + L T C TP YVAPEVL + Y
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKY 194
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--ISTDAK 240
D S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +S + K
Sbjct: 195 DKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 253
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
LI LL ++P +R+TI M PW + P
Sbjct: 254 MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV-MRLVRHPNVV 73
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 28 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 79
Query: 74 ELREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCH 126
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + H
Sbjct: 80 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 139
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
S ++HR I +DFG + ++ + L T C TP YVAPEVL
Sbjct: 140 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVL 196
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--I 235
+ YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +
Sbjct: 197 GPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 255
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
S + K LI LL ++P +R+TI M PW + P
Sbjct: 256 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 293
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV-MRLVRHPNVV 73
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 74 ELREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCH 126
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
S ++HR I +DFG + ++ + L T C TP YVAPEVL
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVL 191
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--I 235
+ YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +
Sbjct: 192 GPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 250
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
S + K LI LL ++P +R+TI M PW + P
Sbjct: 251 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 15/268 (5%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
++ Y++ LG G F V+ + TG K IN ++ +K EIS+M +
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQL 105
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARG--RLREDLARKYFQQLISAVDFC 125
HP ++ L + K ++ + +E++ GGELF ++A ++ E Y +Q +
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 126 HSRGVSHRXXXXXXXX--XXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL 183
H + H I DFGL+ +L D ++ T + APE++
Sbjct: 166 HEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT---KLNPDEIVKVTTATAEFAAPEIV 222
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYP----PWISTDA 239
++ G D+W+ GV+ YVLL+G PF E+ + + V + ++ + +S +A
Sbjct: 223 DREPV-GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFR 267
K I LL +P +R+T+ + PW +
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 22/294 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY +G+G VY + TG+ VAI+ +N Q K+ E I EI VMR ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNP 77
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
N+V + +++V MEY+ GG L V + E ++ + A++F HS V
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA--LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
HR ++DFG A PEQ + T GTP ++APEV+ +K Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS----TMVGTPYWMAPEVVTRKAY 193
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF---KAEFVYPPWISTDAKRLISK 245
G K D+WS G++ ++ G P+ +EN + + E P +S + +++
Sbjct: 194 -GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 252
Query: 246 LLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXXQAATEKTENDR 299
L D E+R + + +++ + + +P++ S+T AA E T+N+
Sbjct: 253 CLDMDVEKRGSAKELLQHQFLK--IAKPLS-SLTP------LIAAAKEATKNNH 297
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 52/310 (16%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKK--EFMMEQIKREISVMRLVR 68
KY + +G+G++ V + T AIK++NK+++++ +E+IK E+ +M+ +
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKV------ARGRL---------------- 106
HPN+ L EV ++ I + ME GG L K+ + G+
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 107 -------------------REDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXX 147
RE L +Q+ SA+ + H++G+ HR
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 148 XXIS--DFGLSALPEQLRNDGL--LHTQCGTPAYVAPEVLRKKGYD-GSKADLWSCGVIL 202
I DFGLS +L N + T+ GTP +VAPEVL G K D WS GV+L
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 203 YVLLAGFLPFQDENIMNMYRKVFKAEFVY--PPW--ISTDAKRLISKLLVSDPERRITIQ 258
++LL G +PF N + +V + + P + +S A+ L+S LL + + R
Sbjct: 267 HLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAM 326
Query: 259 SIMRVPWFRK 268
++ PW +
Sbjct: 327 RALQHPWISQ 336
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 13/249 (5%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY +G+G VY + TG+ VAI+ +N Q K+ E I EI VMR ++P
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNP 78
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
N+V + +++V MEY+ GG L V + E ++ + A++F HS V
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA--LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
HR ++DFG A PEQ + T GTP ++APEV+ +K Y
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS----TMVGTPYWMAPEVVTRKAY 194
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF---KAEFVYPPWISTDAKRLISK 245
G K D+WS G++ ++ G P+ +EN + + E P +S + +++
Sbjct: 195 -GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 253
Query: 246 LLVSDPERR 254
L D E+R
Sbjct: 254 CLEMDVEKR 262
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 129/273 (47%), Gaps = 21/273 (7%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
++LG G KV T E A+K++ +D K +E R +VR +V E
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKML-QDCPKARREVELHWRASQCPHIVRIVDVYE 79
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCHSRGVS 131
+ A +K + + ME + GGELF+++ RG E A + + + A+ + HS ++
Sbjct: 80 --NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 137
Query: 132 HRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
HR I +DFG + ++ + L C TP YVAPEVL + Y
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTEPCYTPYYVAPEVLGPEKY 194
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--ISTDAK 240
D S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +S + K
Sbjct: 195 DKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 253
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
LI LL ++P +R+TI M PW + P
Sbjct: 254 MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 139/294 (47%), Gaps = 22/294 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY +G+G VY + TG+ VAI+ +N Q K+ E I EI VMR ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNP 77
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
N+V + +++V MEY+ GG L V + E ++ + A++F HS V
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA--LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
HR ++DFG A PEQ + ++ GTP ++APEV+ +K Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAY 193
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF---KAEFVYPPWISTDAKRLISK 245
G K D+WS G++ ++ G P+ +EN + + E P +S + +++
Sbjct: 194 -GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 252
Query: 246 LLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXXQAATEKTENDR 299
L D E+R + + +++ + + +P++ S+T AA E T+N+
Sbjct: 253 CLEMDVEKRGSAKELLQHQFLK--IAKPLS-SLTP------LIAAAKEATKNNH 297
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 140/285 (49%), Gaps = 38/285 (13%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR-HPNVVEL 75
+LG+G A+V L+T + A+K+I K + + ++ RE+ ++ + H NV+EL
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVARGRLREDL-ARKYFQQLISAVDFCHSRGVSHR- 133
E + + ++ E ++GG + + + + R +L A Q + SA+DF H++G++HR
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 134 --XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL------LHTQCGTPAYVAPEVLRK 185
I DFGL + +L D L T CG+ Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGS-GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 186 KGYDGS----KADLWSCGVILYVLLAGFLPF-----------------QDENIMNMYRKV 224
+ S + DLWS GVILY+LL+G+ PF +N++ +
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 225 FKAEFVYPPW--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
K EF W IS AK LISKLLV D ++R++ +++ PW +
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 139/294 (47%), Gaps = 22/294 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY +G+G VY + TG+ VAI+ +N Q K+ E I EI VMR ++P
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNP 78
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
N+V + +++V MEY+ GG L V + E ++ + A++F HS V
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA--LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
HR ++DFG A PEQ + ++ GTP ++APEV+ +K Y
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAY 194
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF---KAEFVYPPWISTDAKRLISK 245
G K D+WS G++ ++ G P+ +EN + + E P +S + +++
Sbjct: 195 -GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 253
Query: 246 LLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXXQAATEKTENDR 299
L D E+R + + +++ + + +P++ S+T AA E T+N+
Sbjct: 254 CLEMDVEKRGSAKELIQHQFLK--IAKPLS-SLTP------LIAAAKEATKNNH 298
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 139/294 (47%), Gaps = 22/294 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY +G+G VY + TG+ VAI+ +N Q K+ E I EI VMR ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNP 77
Query: 71 NVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
N+V + +++V MEY+ GG L V + E ++ + A++F HS V
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA--LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
HR ++DFG A PEQ + ++ GTP ++APEV+ +K Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV----GTPYWMAPEVVTRKAY 193
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF---KAEFVYPPWISTDAKRLISK 245
G K D+WS G++ ++ G P+ +EN + + E P +S + +++
Sbjct: 194 -GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 252
Query: 246 LLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXXQAATEKTENDR 299
L D E+R + + +++ + + +P++ S+T AA E T+N+
Sbjct: 253 CLDMDVEKRGSAKELLQHQFLK--IAKPLS-SLTP------LIAAAKEATKNNH 297
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 139/285 (48%), Gaps = 38/285 (13%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR-HPNVVEL 75
+LG+G A+V L+T + A+K+I K + + ++ RE+ ++ + H NV+EL
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 76 REVMATKKKIFVAMEYVKGGELFAKVARGRLREDL-ARKYFQQLISAVDFCHSRGVSHR- 133
E + + ++ E ++GG + + + + R +L A Q + SA+DF H++G++HR
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 134 --XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL------LHTQCGTPAYVAPEVLRK 185
I DF L + +L D L T CG+ Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGS-GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 186 KGYDGS----KADLWSCGVILYVLLAGFLPF-----------------QDENIMNMYRKV 224
+ S + DLWS GVILY+LL+G+ PF +N++ +
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 225 FKAEFVYPPW--ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
K EF W IS AK LISKLLV D ++R++ +++ PW +
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 130/270 (48%), Gaps = 18/270 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+ +++G+G F +V K + A+K++NK ++ K + E V+
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRG 129
+ L +++ M+Y GG+L +++ RL E++AR Y +++ A+D H
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC--GTPAYVAPEVLRK-- 185
HR ++DFG S L +L DG + + GTP Y++PE+L+
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFG-SCL--KLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 186 --KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF--KAEFVYPPW---ISTD 238
KG G + D WS GV +Y +L G PF E+++ Y K+ K F +P +S +
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSEN 312
Query: 239 AKRLISKLLVSDPER--RITIQSIMRVPWF 266
AK LI +L+ S R + I+ + P+F
Sbjct: 313 AKDLIRRLICSREHRLGQNGIEDFKKHPFF 342
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 17/257 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+ +++G+G F +V K T A+K++NK ++ K + E V+
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRG 129
+ L + +++ M+Y GG+L +++ +L ED+AR Y +++ A+D H
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC--GTPAYVAPEVLRKK- 186
HR ++DFG S L ++ +DG + + GTP Y++PE+L+
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFG-SCL--KMNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 187 ---GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE--FVYPPW---ISTD 238
G G + D WS GV +Y +L G PF E+++ Y K+ E F +P +S +
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEE 328
Query: 239 AKRLISKLLVSDPERRI 255
AK LI +L+ S ERR+
Sbjct: 329 AKDLIQRLICS-RERRL 344
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E+V + A + L + Y QL+ + FCHS V HR
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 17/257 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+ +++G+G F +V K T A+K++NK ++ K + E V+
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRG 129
+ L + +++ M+Y GG+L +++ +L ED+AR Y +++ A+D H
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC--GTPAYVAPEVLRKK- 186
HR ++DFG S L ++ +DG + + GTP Y++PE+L+
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFG-SCL--KMNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 187 ---GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE--FVYPPW---ISTD 238
G G + D WS GV +Y +L G PF E+++ Y K+ E F +P +S +
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEE 312
Query: 239 AKRLISKLLVSDPERRI 255
AK LI +L+ S ERR+
Sbjct: 313 AKDLIQRLICSR-ERRL 328
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 137 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGXKYYSTAVD 193
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 253
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 254 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 301
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPENLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGXKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 72 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 132 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 296
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 16/266 (6%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
+ + + +G+G F++VY L+ G VA+K + L +EI +++ +
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGEL------FAKVARGRLREDLARKYFQQLISAV 122
HPNV++ ++ + +E G+L F K R + E KYF QL SA+
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKR-LIPERTVWKYFVQLCSAL 149
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEV 182
+ HSR V HR + D GL H+ GTP Y++PE
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPER 207
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFV-YPPW----IST 237
+ + GY+ K+D+WS G +LY + A PF + MN+Y K E YPP S
Sbjct: 208 IHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDK-MNLYSLCKKIEQCDYPPLPSDHYSE 265
Query: 238 DAKRLISKLLVSDPERRITIQSIMRV 263
+ ++L++ + DPE+R + + V
Sbjct: 266 ELRQLVNMCINPDPEKRPDVTYVYDV 291
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 73 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 297
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 295
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E+V A + L + Y QL+ + FCHS V HR
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 131 KPENLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 295
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 293
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 132 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 296
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 132 KPENLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 296
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 295
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 297
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 297
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 132 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 296
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 132/302 (43%), Gaps = 18/302 (5%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 178
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 232
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQHXXXXXXXQAATEKT 295
S++ + LI L P R T + I PW + I H ++
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPSKSGPSSG 292
Query: 296 EN 297
EN
Sbjct: 293 EN 294
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 294
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 131 KPENLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 137 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 193
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 253
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 254 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 301
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 134 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 190
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 250
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 251 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 298
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 134 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 190
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 250
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 251 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 298
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E ++ +LF + RG L+E+LAR +F
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFW 121
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 177
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 231
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 232 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 73 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 133 KPENLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 297
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ A + L + Y QL+ + FCHS V HR
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F+ T+PV
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD-VTKPV 297
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 193
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 247
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 248 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 121
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 177
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 231
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 232 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 18/273 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 219
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW 234
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR 273
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S++ + LI L P R T + I PW +
Sbjct: 274 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 192
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 246
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 247 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 178
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 232
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 178
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 232
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 60
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 120
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 176
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 230
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 231 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 18/273 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 211
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW 234
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + +
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR 265
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S++ + LI L P R T + I PW +
Sbjct: 266 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 18/273 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 204
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW 234
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR 258
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S++ + LI L P R T + I PW +
Sbjct: 259 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 22/276 (7%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVA---IKVINKDQLKKEFMMEQIKREISVM 64
L+ KY + LG+G F V+ + + ++ +KV DQ+ +K+EIS++
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV-------LVKKEISIL 55
Query: 65 RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARG--RLREDLARKYFQQLISAV 122
+ RH N++ L E + +++ + E++ G ++F ++ L E Y Q+ A+
Sbjct: 56 NIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXIS--DFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
F HS + H I +FG + + N LL T P Y AP
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT---APEYYAP 172
Query: 181 EVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP----WIS 236
EV + + D+WS G ++YVLL+G PF E + + AE+ + IS
Sbjct: 173 EV-HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS 231
Query: 237 TDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTR 272
+A + +LLV + + R+T ++ PW ++ R
Sbjct: 232 IEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 36/282 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+K I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
P + D + L+S++L DP +RI+ ++ + P+F+
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 124/273 (45%), Gaps = 21/273 (7%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
++LG G KV T E A+K + +D K +E R +VR +V E
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKXL-QDCPKARREVELHWRASQCPHIVRIVDVYE 125
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCHSRGVS 131
+ A +K + + E + GGELF+++ RG E A + + + A+ + HS ++
Sbjct: 126 --NLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIA 183
Query: 132 HRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
HR I +DFG + ++ + L T C TP YVAPEVL + Y
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 189 DGSKADLWSCGVILYVLLAGFLPFQDENIMNMYR------KVFKAEFVYPPW--ISTDAK 240
D S D WS GVI Y+LL G+ PF + + + + + EF P W +S + K
Sbjct: 241 DKS-CDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVK 299
Query: 241 RLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
LI LL ++P +R TI PW + P
Sbjct: 300 XLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVP 332
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 192
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 193 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 246
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S + + LI L P R T + I PW +
Sbjct: 247 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 205
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQ-DENIMNMYRKVFKAEFVYPP 233
Y PE +R Y G A +WS G++LY ++ G +PF+ DE I+ +VF + V
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG--GQVFFRQRV--- 260
Query: 234 WISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 261 --SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 193
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 247
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S + + LI L P R T + I PW +
Sbjct: 248 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 205
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQ-DENIMNMYRKVFKAEFVYPP 233
Y PE +R Y G A +WS G++LY ++ G +PF+ DE I+ +VF + V
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG--GQVFFRQRV--- 260
Query: 234 WISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 261 --SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+ I D + E + REIS+++ + HPN+V+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 204
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQ-DENIMNMYRKVFKAEFVYPP 233
Y PE +R Y G A +WS G++LY ++ G +PF+ DE I+ +VF + V
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG--GQVFFRQRV--- 259
Query: 234 WISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 260 --SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+GT+ VY + +TGE VA+ I D + E + REIS+++ + HPN+V+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V+ T+ K+++ E++ + A + L + Y QL+ + FCHS V HR
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 136 XXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFGL+ A +R + T Y APE+L Y + D
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-----EFVYP----------------- 232
+WS G I ++ F ++ ++ ++F+ E V+P
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 233 -------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P + D + L+S++L DP +RI+ ++ + P+F + T+PV
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 18/273 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 219
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW 234
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR 273
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S + + LI L P R T + I PW +
Sbjct: 274 VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 204
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQ-DENIMNMYRKVFKAEFVYPP 233
Y PE +R Y G A +WS G++LY ++ G +PF+ DE I+ +VF + V
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG--GQVFFRQRV--- 259
Query: 234 WISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 260 --SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 193
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 194 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 247
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S + + LI L P R T + I PW +
Sbjct: 248 SXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 32/284 (11%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ ++G G A V E VAIK IN ++ + M+++ +EI M HPN
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPN 74
Query: 72 VVELREVMATKKKIFVAMEYVKGGELF----AKVARGR-----LREDLARKYFQQLISAV 122
+V K ++++ M+ + GG + VA+G L E ++++ +
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPE---QLRNDGLLHTQCGTPAYVA 179
++ H G HR I+DFG+SA + + + T GTP ++A
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 180 PEVLRK-KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTD 238
PEV+ + +GYD KAD+WS G+ L G P+ M + + + PP + T
Sbjct: 195 PEVMEQVRGYD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND---PPSLETG 250
Query: 239 A-------------KRLISKLLVSDPERRITIQSIMRVPWFRKG 269
+++IS L DPE+R T ++R +F+K
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 132/256 (51%), Gaps = 17/256 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+ V ++ +G VA+K+++ L+K+ E + E+ +MR +H NVVE+ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXX 137
++++V ME+++GG L V++ RL E+ + ++ A+ + H++GV HR
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKS 169
Query: 138 XXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ-CGTPAYVAPEVLRKKGYDGSKADLW 196
+SDFG A Q+ D GTP ++APEV+ + Y ++ D+W
Sbjct: 170 DSILLTLDGRVKLSDFGFCA---QISKDVPKRKXLVGTPYWMAPEVISRSLY-ATEVDIW 225
Query: 197 SCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP------WISTDAKRLISKLLVSD 250
S G+++ ++ G P+ ++ + +++ + PP +S + + ++LV D
Sbjct: 226 SLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---PPKLKNSHKVSPVLRDFLERMLVRD 282
Query: 251 PERRITIQSIMRVPWF 266
P+ R T Q ++ P+
Sbjct: 283 PQERATAQELLDHPFL 298
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++ E
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 84
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 85 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 144
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 200
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 254
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S + + LI L P R T + I PW +
Sbjct: 255 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 18/273 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 168
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 224
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW 234
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + +
Sbjct: 225 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQR 278
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S + + LI L P R T + I PW +
Sbjct: 279 VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 20/274 (7%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 205
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQ-DENIMNMYRKVFKAEFVYPP 233
Y PE +R Y G A +WS G++LY ++ G +PF+ DE I+ +VF + V
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG--GQVFFRQRV--- 260
Query: 234 WISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S + + LI L P R T + I PW +
Sbjct: 261 --SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 18/265 (6%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKREISVMRLV 67
+Y++G LLG G F VY G ++ VAIK + KD++ + ++ E+ +++ V
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 68 RH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQQLISAVD 123
V+ L + + +E + +LF + RG L+E+LAR +F Q++ AV
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 124 FCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEV 182
CH+ GV HR + DFG AL D + GT Y PE
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 180
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRL 242
+R Y G A +WS G++LY ++ G +PF+ + ++ + + + +S++ + L
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHL 234
Query: 243 ISKLLVSDPERRITIQSIMRVPWFR 267
I L P R T + I PW +
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 17/257 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+ V + TG+ VA+K K L+K+ E + E+ +MR H NVV++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVK---KMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXX 137
+++V ME+++GG L V R+ E+ ++ A+ + H++GV HR
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 138 XXXXXXXXXXXXISDFGLSA-LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLW 196
+SDFG A + +++ L GTP ++APEV+ + Y G++ D+W
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL---VGTPYWMAPEVISRLPY-GTEVDIW 225
Query: 197 SCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW------ISTDAKRLISKLLVSD 250
S G+++ ++ G P+ +E + R++ + PP +S+ + + +LV +
Sbjct: 226 SLGIMVIEMIDGEPPYFNEPPLQAMRRIRDS---LPPRVKDLHKVSSVLRGFLDLMLVRE 282
Query: 251 PERRITIQSIMRVPWFR 267
P +R T Q ++ P+ +
Sbjct: 283 PSQRATAQELLGHPFLK 299
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 20/274 (7%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 205
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQ-DENIMNMYRKVFKAEFVYPP 233
Y PE +R Y G A +WS G++LY ++ G +PF+ DE I+ +VF + V
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG--GQVFFRQRV--- 260
Query: 234 WISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S + + LI L P R T + I PW +
Sbjct: 261 --SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 20/274 (7%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKR 59
+E+ L +Y++G LLG G F VY G ++ VAIK + KD++ + ++
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 60 EISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYF 115
E+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGT 204
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQ-DENIMNMYRKVFKAEFVYPP 233
Y PE +R Y G A +WS G++LY ++ G +PF+ DE I+ +VF + V
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG--GQVFFRQRV--- 259
Query: 234 WISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S + + LI L P R T + I PW +
Sbjct: 260 --SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 32/284 (11%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ ++G G A V E VAIK IN ++ + M+++ +EI M HPN
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPN 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELF----AKVARGR-----LREDLARKYFQQLISAV 122
+V K ++++ M+ + GG + VA+G L E ++++ +
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPE---QLRNDGLLHTQCGTPAYVA 179
++ H G HR I+DFG+SA + + + T GTP ++A
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 180 PEVLRK-KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTD 238
PEV+ + +GYD KAD+WS G+ L G P+ M + + + PP + T
Sbjct: 190 PEVMEQVRGYD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND---PPSLETG 245
Query: 239 A-------------KRLISKLLVSDPERRITIQSIMRVPWFRKG 269
+++IS L DPE+R T ++R +F+K
Sbjct: 246 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 18/265 (6%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKREISVMRLV 67
+Y++G LLG G F VY G ++ VAIK + KD++ + ++ E+ +++ V
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 68 RH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQQLISAVD 123
V+ L + + +E + +LF + RG L+E+LAR +F Q++ AV
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 124 FCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEV 182
CH+ GV HR + DFG AL D + GT Y PE
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 180
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRL 242
+R Y G A +WS G++LY ++ G +PF+ + ++ + + + +S + + L
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHL 234
Query: 243 ISKLLVSDPERRITIQSIMRVPWFR 267
I L P R T + I PW +
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 20/266 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKREISVMRLV 67
+Y++G LLG G F VY G ++ VAIK + KD++ + ++ E+ +++ V
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 68 RH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQQLISAVD 123
V+ L + + +E + +LF + RG L+E+LAR +F Q++ AV
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 124 FCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEV 182
CH+ GV HR + DFG AL D + GT Y PE
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTRVYSPPEW 180
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPFQ-DENIMNMYRKVFKAEFVYPPWISTDAKR 241
+R Y G A +WS G++LY ++ G +PF+ DE I+ +VF + V S++ +
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG--GQVFFRQRV-----SSECQH 233
Query: 242 LISKLLVSDPERRITIQSIMRVPWFR 267
LI L P R T + I PW +
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+ V +G+ VA+K K L+K+ E + E+ +MR +H NVVE+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXX 137
+++V ME+++GG L V R+ E+ ++ A+ H++GV HR
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 138 XXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+SDFG A E R L+ GTP ++APE++ + Y G + D+
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPY-GPEVDI 203
Query: 196 WSCGVILYVLLAGFLPFQDE---NIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPE 252
WS G+++ ++ G P+ +E M M R +S K + +LLV DP
Sbjct: 204 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 263
Query: 253 RRITIQSIMRVPWFRKG 269
+R T +++ P+ K
Sbjct: 264 QRATAAELLKHPFLAKA 280
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+ V +G+ VA+K K L+K+ E + E+ +MR +H NVVE+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXX 137
+++V ME+++GG L V R+ E+ ++ A+ H++GV HR
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 138 XXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+SDFG A E R L+ GTP ++APE++ + Y G + D+
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPY-GPEVDI 199
Query: 196 WSCGVILYVLLAGFLPFQDE---NIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPE 252
WS G+++ ++ G P+ +E M M R +S K + +LLV DP
Sbjct: 200 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 259
Query: 253 RRITIQSIMRVPWFRKG 269
+R T +++ P+ K
Sbjct: 260 QRATAAELLKHPFLAKA 276
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+ V +G+ VA+K K L+K+ E + E+ +MR +H NVVE+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXX 137
+++V ME+++GG L V R+ E+ ++ A+ H++GV HR
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 153
Query: 138 XXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+SDFG A E R L+ GTP ++APE++ + Y G + D+
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPY-GPEVDI 208
Query: 196 WSCGVILYVLLAGFLPFQDE---NIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPE 252
WS G+++ ++ G P+ +E M M R +S K + +LLV DP
Sbjct: 209 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 268
Query: 253 RRITIQSIMRVPWFRKG 269
+R T +++ P+ K
Sbjct: 269 QRATAAELLKHPFLAKA 285
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+ V +G+ VA+K K L+K+ E + E+ +MR +H NVVE+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXX 137
+++V ME+++GG L V R+ E+ ++ A+ H++GV HR
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 155
Query: 138 XXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+SDFG A E R L+ GTP ++APE++ + Y G + D+
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPY-GPEVDI 210
Query: 196 WSCGVILYVLLAGFLPFQDE---NIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPE 252
WS G+++ ++ G P+ +E M M R +S K + +LLV DP
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 270
Query: 253 RRITIQSIMRVPWFRKG 269
+R T +++ P+ K
Sbjct: 271 QRATAAELLKHPFLAKA 287
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+ V +G+ VA+K K L+K+ E + E+ +MR +H NVVE+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXX 137
+++V ME+++GG L V R+ E+ ++ A+ H++GV HR
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 138 XXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+SDFG A E R L+ GTP ++APE++ + Y G + D+
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPY-GPEVDI 330
Query: 196 WSCGVILYVLLAGFLPFQDE---NIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPE 252
WS G+++ ++ G P+ +E M M R +S K + +LLV DP
Sbjct: 331 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 390
Query: 253 RRITIQSIMRVPWFRKG 269
+R T +++ P+ K
Sbjct: 391 QRATAAELLKHPFLAKA 407
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+ V +G+ VA+K K L+K+ E + E+ +MR +H NVVE+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXX 137
+++V ME+++GG L V R+ E+ ++ A+ H++GV HR
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 198
Query: 138 XXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+SDFG A E R L+ GTP ++APE++ + Y G + D+
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPY-GPEVDI 253
Query: 196 WSCGVILYVLLAGFLPFQDE---NIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPE 252
WS G+++ ++ G P+ +E M M R +S K + +LLV DP
Sbjct: 254 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 313
Query: 253 RRITIQSIMRVPWFRKG 269
+R T +++ P+ K
Sbjct: 314 QRATAAELLKHPFLAKA 330
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 132/271 (48%), Gaps = 10/271 (3%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+E V F +E+ R +GKG+F KV ++ T + A+K +NK + + + + +E+
Sbjct: 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKEL 66
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLIS 120
+M+ + HP +V L ++ +F+ ++ + GG+L + + +E+ + + +L+
Sbjct: 67 QIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVM 126
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
A+D+ ++ + HR I+DF ++A+ L + + T GT Y+AP
Sbjct: 127 ALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM---LPRETQITTMAGTKPYMAP 183
Query: 181 EVL-RKKGYDGSKA-DLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE---FVYPPWI 235
E+ +KG S A D WS GV Y LL G P+ + + V E YP
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW 243
Query: 236 STDAKRLISKLLVSDPERRIT-IQSIMRVPW 265
S + L+ KLL +P++R + + + P+
Sbjct: 244 SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 120/265 (45%), Gaps = 22/265 (8%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH-PNVVELR 76
LG+G FA V TG+ A K + K + ++ E I EI+V+ L + P V+ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE-ILHEIAVLELAKSCPRVINLH 95
Query: 77 EVMATKKKIFVAMEYVKGGELFA----KVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
EV +I + +EY GGE+F+ ++A D+ R +Q++ V + H + H
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIR-LIKQILEGVYYLHQNNIVH 154
Query: 133 ---RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
+ I DFG+S ++ + L GTP Y+APE+L YD
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMS---RKIGHACELREIMGTPEYLAPEIL---NYD 208
Query: 190 --GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYP----PWISTDAKRLI 243
+ D+W+ G+I Y+LL PF E+ Y + + Y +S A I
Sbjct: 209 PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFI 268
Query: 244 SKLLVSDPERRITIQSIMRVPWFRK 268
LLV +PE+R T + + W ++
Sbjct: 269 QSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 20/275 (7%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+ LG G F KVY + T A KVI+ K E +E EI ++ HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT---KSEEELEDYMVEIDILASCDHPN 95
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVDFCHSRG 129
+V+L + + +++ +E+ GG + A + L E + +Q + A+++ H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL--RNDGLLHTQCGTPAYVAPEVL---- 183
+ HR ++DFG+SA + R D + GTP ++APEV+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI----GTPYWMAPEVVMCET 211
Query: 184 -RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE---FVYPPWISTDA 239
+ + YD KAD+WS G+ L + P + N M + K+ K+E P S++
Sbjct: 212 SKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
K + K L + + R T +++ P+ +P+
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+GKG+F +VY G T E VAIK+I D + E +E I++EI+V+ P +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXXX 137
K+++ MEY+ GG + G L E ++++ +D+ HS HR
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKA 144
Query: 138 XXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ-CGTPAYVAPEVLRKKGYDGSKADLW 196
++DFG++ QL + + GTP ++APEV+++ YD KAD+W
Sbjct: 145 ANVLLSEQGDVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPEVIKQSAYD-FKADIW 200
Query: 197 SCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI----STDAKRLISKLLVSDPE 252
S G+ L G P D + M R +F PP + S K + L DP
Sbjct: 201 SLGITAIELAKGEPPNSDLHPM---RVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPR 257
Query: 253 RRITIQSIMR 262
R T + +++
Sbjct: 258 FRPTAKELLK 267
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 20/275 (7%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+ LG G F KVY + T A KVI+ K E +E EI ++ HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT---KSEEELEDYMVEIDILASCDHPN 95
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVDFCHSRG 129
+V+L + + +++ +E+ GG + A + L E + +Q + A+++ H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL--RNDGLLHTQCGTPAYVAPEVL---- 183
+ HR ++DFG+SA + R D + GTP ++APEV+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI----GTPYWMAPEVVMCET 211
Query: 184 -RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE---FVYPPWISTDA 239
+ + YD KAD+WS G+ L + P + N M + K+ K+E P S++
Sbjct: 212 SKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
K + K L + + R T +++ P+ +P+
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 30/278 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+ LG G F KVY K TG A KVI + K E +E EI ++ HP
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIEILATCDHPY 77
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQLISAVDFCHSR 128
+V+L K+++ +E+ GG + A ++ RG L E + +Q++ A++F HS+
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK 136
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEV-----L 183
+ HR ++DFG+SA + L+ + GTP ++APEV +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLI 243
+ YD KAD+WS G+ L + P + N M + K+ K++ PP + T +K
Sbjct: 195 KDTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD---PPTLLTPSK--- 247
Query: 244 SKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQH 281
+ + +++ + TRP A + +H
Sbjct: 248 ---------WSVEFRDFLKIALDKNPETRPSAAQLLEH 276
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 17/273 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L +YE+G +LG G ++V+ + L VA+KV+ D + + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 RHPNVVELREVMATKKKI----FVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAV 122
HP +V + + + ++ MEYV G L V G + A + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC----GTPAYV 178
+F H G+ HR + DFG++ + + G TQ GT Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA---RAIADSGNSVTQTAAVIGTAQYL 186
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP----W 234
+PE R D +++D++S G +LY +L G PF ++ +++ + + + + P
Sbjct: 187 SPEQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 245
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S D ++ K L +PE R + MR R
Sbjct: 246 LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 30/278 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+ LG G F KVY K TG A KVI + K E +E EI ++ HP
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIEILATCDHPY 69
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQLISAVDFCHSR 128
+V+L K+++ +E+ GG + A ++ RG L E + +Q++ A++F HS+
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSK 128
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEV-----L 183
+ HR ++DFG+SA + L+ + GTP ++APEV +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLI 243
+ YD KAD+WS G+ L + P + N M + K+ K++ PP + T +K
Sbjct: 187 KDTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD---PPTLLTPSK--- 239
Query: 244 SKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFSITQH 281
+ + +++ + TRP A + +H
Sbjct: 240 ---------WSVEFRDFLKIALDKNPETRPSAAQLLEH 268
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 20/275 (7%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+ LG G F KVY + T A KVI+ K E +E EI ++ HPN
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT---KSEEELEDYMVEIDILASCDHPN 95
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVDFCHSRG 129
+V+L + + +++ +E+ GG + A + L E + +Q + A+++ H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL--RNDGLLHTQCGTPAYVAPEVL---- 183
+ HR ++DFG+SA + R D + GTP ++APEV+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI----GTPYWMAPEVVMCET 211
Query: 184 -RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE---FVYPPWISTDA 239
+ + YD KAD+WS G+ L + P + N M + K+ K+E P S++
Sbjct: 212 SKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 240 KRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
K + K L + + R T +++ P+ +P+
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 17/273 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L +YE+G +LG G ++V+ + L VA+KV+ D + + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 RHPNVVELREVMATKKKI----FVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAV 122
HP +V + + + ++ MEYV G L V G + A + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC----GTPAYV 178
+F H G+ HR + DFG++ + + G TQ GT Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA---RAIADSGNSVTQTAAVIGTAQYL 186
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP----W 234
+PE R D +++D++S G +LY +L G PF ++ +++ + + + + P
Sbjct: 187 SPEQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 245
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S D ++ K L +PE R + MR R
Sbjct: 246 LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
LF K E +GKG+F +V+ G T + VAIK+I D + E +E I++EI+V+
Sbjct: 28 LFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC 82
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHS 127
P V + K+++ MEY+ GG + G L E ++++ +D+ HS
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 142
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL-LHTQCGTPAYVAPEVLRKK 186
HR ++DFG++ QL + + +T GTP ++APEV+++
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPEVIKQS 199
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI----STDAKRL 242
YD SKAD+WS G+ L G P + + M + + K PP + S K
Sbjct: 200 AYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEF 255
Query: 243 ISKLLVSDPERRITIQSIMR 262
+ L +P R T + +++
Sbjct: 256 VEACLNKEPSFRPTAKELLK 275
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
LF K E +GKG+F +V+ G T + VAIK+I D + E +E I++EI+V+
Sbjct: 8 LFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC 62
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHS 127
P V + K+++ MEY+ GG + G L E ++++ +D+ HS
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL-LHTQCGTPAYVAPEVLRKK 186
HR ++DFG++ QL + + +T GTP ++APEV+++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI----STDAKRL 242
YD SKAD+WS G+ L G P + + M + + K PP + S K
Sbjct: 180 AYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEF 235
Query: 243 ISKLLVSDPERRITIQSIMR 262
+ L +P R T + +++
Sbjct: 236 VEACLNKEPSFRPTAKELLK 255
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 11/270 (4%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L +YE+G +LG G ++V+ + L VA+KV+ D + + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 RHPNVVELREVMATKKKI----FVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAV 122
HP +V + + + ++ MEYV G L V G + A + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPE 181
+F H G+ HR + DFG++ A+ + + GT Y++PE
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE 189
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP----WIST 237
R D +++D++S G +LY +L G PF ++ +++ + + + + P +S
Sbjct: 190 QARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSA 248
Query: 238 DAKRLISKLLVSDPERRITIQSIMRVPWFR 267
D ++ K L +PE R + MR R
Sbjct: 249 DLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 17/273 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L +YE+G +LG G ++V+ + L VA+KV+ D + + +RE +
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 86
Query: 68 RHPNVVELREVMATKKKI----FVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAV 122
HP +V + + + ++ MEYV G L V G + A + A+
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 146
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC----GTPAYV 178
+F H G+ HR + DFG++ + + G TQ GT Y+
Sbjct: 147 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA---RAIADSGNSVTQTAAVIGTAQYL 203
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP----W 234
+PE R D +++D++S G +LY +L G PF ++ +++ + + + + P
Sbjct: 204 SPEQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 262
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S D ++ K L +PE R + MR R
Sbjct: 263 LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 295
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 17/273 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L +YE+G +LG G ++V+ + L VA+KV+ D + + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 RHPNVVELREVMATKKKI----FVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAV 122
HP +V + + + ++ MEYV G L V G + A + A+
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC----GTPAYV 178
+F H G+ HR + DFG++ + + G TQ GT Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA---RAIADSGNSVTQTAAVIGTAQYL 186
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP----W 234
+PE R D +++D++S G +LY +L G PF ++ ++ + + + + P
Sbjct: 187 SPEQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEG 245
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S D ++ K L +PE R + MR R
Sbjct: 246 LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 17/260 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
LF K E +GKG+F +V+ G T + VAIK+I D + E +E I++EI+V+
Sbjct: 24 LFTKLER---IGKGSFGEVFKGIDNRTQQVVAIKII--DLEEAEDEIEDIQQEITVLSQC 78
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHS 127
V + K+++ MEY+ GG + G E ++++ +D+ HS
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHS 138
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL-LHTQCGTPAYVAPEVLRKK 186
HR ++DFG++ QL + + +T GTP ++APEV+++
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTD----AKRL 242
YD SKAD+WS G+ L G P D M+ R +F PP + D K
Sbjct: 196 AYD-SKADIWSLGITAIELAKGEPPNSD---MHPMRVLFLIPKNNPPTLVGDFTKSFKEF 251
Query: 243 ISKLLVSDPERRITIQSIMR 262
I L DP R T + +++
Sbjct: 252 IDACLNKDPSFRPTAKELLK 271
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 17/273 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L +YE+G +LG G ++V+ + L VA+KV+ D + + +RE +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 68 RHPNVVELREVMATKKKI----FVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAV 122
HP +V + + ++ MEYV G L V G + A + A+
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC----GTPAYV 178
+F H G+ HR + DFG++ + + G TQ GT Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA---RAIADSGNSVTQTAAVIGTAQYL 186
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP----W 234
+PE R D +++D++S G +LY +L G PF ++ +++ + + + + P
Sbjct: 187 SPEQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 245
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+S D ++ K L +PE R + MR R
Sbjct: 246 LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 17/260 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
LF K E +GKG+F +V+ G T + VAIK+I D + E +E I++EI+V+
Sbjct: 23 LFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC 77
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHS 127
P V + K+++ MEY+ GG + G L E ++++ +D+ HS
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 137
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ-CGTPAYVAPEVLRKK 186
HR ++DFG++ QL + + GTP ++APEV+++
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI----STDAKRL 242
YD SKAD+WS G+ L G P + + M + + K PP + S K
Sbjct: 195 AYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEF 250
Query: 243 ISKLLVSDPERRITIQSIMR 262
+ L +P R T + +++
Sbjct: 251 VEACLNKEPSFRPTAKELLK 270
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 125/266 (46%), Gaps = 17/266 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ +G G++ + ++ G+ + K ++ + E + + E++++R ++HPN
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPN 66
Query: 72 VVEL--REVMATKKKIFVAMEYVKGGELFAKVARGR-----LREDLARKYFQQLISAVDF 124
+V R + T +++ MEY +GG+L + + +G L E+ + QL A+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 125 CHSRG-----VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVA 179
CH R V HR + DFGL+ + + T GTP Y++
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKTFVGTPYYMS 184
Query: 180 PEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW-ISTD 238
PE + + Y+ K+D+WS G +LY L A PF + + K+ + +F P+ S +
Sbjct: 185 PEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 243
Query: 239 AKRLISKLLVSDPERRITIQSIMRVP 264
+I+++L R +++ I+ P
Sbjct: 244 LNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 23/262 (8%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G++ VY TG+ VAIK Q+ E +++I +EIS+M+ P+VV+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK-----QVPVESDLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
+++ MEY G + ++ L ED Q + +++ H HR
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDI 151
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRND-GLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
++DFG++ QL + + GTP ++APEV+++ GY+ AD
Sbjct: 152 KAGNILLNTEGHAKLADFGVAG---QLTDXMAKRNXVIGTPFWMAPEVIQEIGYN-CVAD 207
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPP-------WISTDAKRLISKLL 247
+WS G+ + G P+ D + M R +F PP W S + + + L
Sbjct: 208 IWSLGITAIEMAEGKPPYADIHPM---RAIFMIPTNPPPTFRKPELW-SDNFTDFVKQCL 263
Query: 248 VSDPERRITIQSIMRVPWFRKG 269
V PE+R T +++ P+ R
Sbjct: 264 VKSPEQRATATQLLQHPFVRSA 285
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 17/260 (6%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
LF K E +GKG+F +V+ G T + VAIK+I D + E +E I++EI+V+
Sbjct: 8 LFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC 62
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHS 127
P V + K+++ MEY+ GG + G L E ++++ +D+ HS
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ-CGTPAYVAPEVLRKK 186
HR ++DFG++ QL + + GTP ++APEV+++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI----STDAKRL 242
YD SKAD+WS G+ L G P + + M + + K PP + S K
Sbjct: 180 AYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEF 235
Query: 243 ISKLLVSDPERRITIQSIMR 262
+ L +P R T + +++
Sbjct: 236 VEACLNKEPSFRPTAKELLK 255
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E+ +++G+G F++V K TG+ A+K++NK + K + + E V+
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRG 129
+ +L + +++ MEY GG+L +++ R+ ++AR Y +++ A+D H G
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT--QCGTPAYVAPEVLRK-- 185
HR ++DFG S L +LR DG + + GTP Y++PE+L+
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFG-SCL--KLRADGTVRSLVAVGTPDYLSPEILQAVG 239
Query: 186 ----KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV--FKAEFVYP---PWIS 236
G G + D W+ GV Y + G PF ++ Y K+ +K P +
Sbjct: 240 GGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVP 299
Query: 237 TDAKRLISKLLVSDPERRI 255
+A+ I +LL PE R+
Sbjct: 300 EEARDFIQRLLCP-PETRL 317
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 125/266 (46%), Gaps = 17/266 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ +G G++ + ++ G+ + K ++ + E + + E++++R ++HPN
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPN 66
Query: 72 VVEL--REVMATKKKIFVAMEYVKGGELFAKVARGR-----LREDLARKYFQQLISAVDF 124
+V R + T +++ MEY +GG+L + + +G L E+ + QL A+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 125 CHSRG-----VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVA 179
CH R V HR + DFGL+ + ++ GTP Y++
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DEDFAKEFVGTPYYMS 184
Query: 180 PEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW-ISTD 238
PE + + Y+ K+D+WS G +LY L A PF + + K+ + +F P+ S +
Sbjct: 185 PEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 243
Query: 239 AKRLISKLLVSDPERRITIQSIMRVP 264
+I+++L R +++ I+ P
Sbjct: 244 LNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 40/290 (13%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KYE +G+GT+ V+ K T E VA+K + D E + REI +++ ++H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHK 61
Query: 71 NVVELREVMATKKKIFVAMEYV-KGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L +V+ + KK+ + E+ + + + G L ++ + + QL+ + FCHSR
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLS---ALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
V HR ++DFGL+ +P + + + T Y P+VL
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS-----AEVVTLWYRPPDVLFGA 176
Query: 187 GYDGSKADLWSCGVILYVLLAGFLP-FQDENIMNMYRKVF-------------------- 225
+ D+WS G I L P F ++ + +++F
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 226 KAEFVYP---------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
K +YP P ++ + L+ LL +P +RI+ + ++ P+F
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 124/266 (46%), Gaps = 17/266 (6%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ +G G++ + ++ G+ + K ++ + E + + E++++R ++HPN
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPN 66
Query: 72 VVEL--REVMATKKKIFVAMEYVKGGELFAKVARGR-----LREDLARKYFQQLISAVDF 124
+V R + T +++ MEY +GG+L + + +G L E+ + QL A+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 125 CHSRG-----VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVA 179
CH R V HR + DFGL+ + + GTP Y++
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMS 184
Query: 180 PEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW-ISTD 238
PE + + Y+ K+D+WS G +LY L A PF + + K+ + +F P+ S +
Sbjct: 185 PEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDE 243
Query: 239 AKRLISKLLVSDPERRITIQSIMRVP 264
+I+++L R +++ I+ P
Sbjct: 244 LNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKK---EFMMEQIKREIS 62
H+ + + R++G+G F +VY ++ TG+ A+K ++K ++K E + + +S
Sbjct: 184 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 243
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISA 121
++ P +V + T K+ ++ + GG+L +++ G E R Y ++I
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
++ H+R V +R ISD GL+ + + H GT Y+APE
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPE 359
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMY---RKVFKAEFVYPPWISTD 238
VL+K S AD +S G +L+ LL G PF+ + + R P S +
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE 419
Query: 239 AKRLISKLLVSDPERRITI-----QSIMRVPWFR 267
+ L+ LL D RR+ Q + P+FR
Sbjct: 420 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKK---EFMMEQIKREIS 62
H+ + + R++G+G F +VY ++ TG+ A+K ++K ++K E + + +S
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISA 121
++ P +V + T K+ ++ + GG+L +++ G E R Y ++I
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
++ H+R V +R ISD GL+ + + H GT Y+APE
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPE 360
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMY---RKVFKAEFVYPPWISTD 238
VL+K S AD +S G +L+ LL G PF+ + + R P S +
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE 420
Query: 239 AKRLISKLLVSDPERRITI-----QSIMRVPWFR 267
+ L+ LL D RR+ Q + P+FR
Sbjct: 421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKK---EFMMEQIKREIS 62
H+ + + R++G+G F +VY ++ TG+ A+K ++K ++K E + + +S
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISA 121
++ P +V + T K+ ++ + GG+L +++ G E R Y ++I
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
++ H+R V +R ISD GL+ + + H GT Y+APE
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPE 360
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMY---RKVFKAEFVYPPWISTD 238
VL+K S AD +S G +L+ LL G PF+ + + R P S +
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE 420
Query: 239 AKRLISKLLVSDPERRITI-----QSIMRVPWFR 267
+ L+ LL D RR+ Q + P+FR
Sbjct: 421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKK---EFMMEQIKREIS 62
H+ + + R++G+G F +VY ++ TG+ A+K ++K ++K E + + +S
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISA 121
++ P +V + T K+ ++ + GG+L +++ G E R Y ++I
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
++ H+R V +R ISD GL+ + + H GT Y+APE
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPE 360
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMY---RKVFKAEFVYPPWISTD 238
VL+K S AD +S G +L+ LL G PF+ + + R P S +
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE 420
Query: 239 AKRLISKLLVSDPERRITI-----QSIMRVPWFR 267
+ L+ LL D RR+ Q + P+FR
Sbjct: 421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 21/267 (7%)
Query: 21 GTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELREVMA 80
G F KVY + T A KVI+ K E +E EI ++ HPN+V+L +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDT---KSEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 81 TKKKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVDFCHSRGVSHRXXXXX 138
+ +++ +E+ GG + A + L E + +Q + A+++ H + HR
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 139 XXXXXXXXXXXISDFGLSALPEQL---RNDGLLHTQCGTPAYVAPEVL-----RKKGYDG 190
++DFG+SA + R D + GTP ++APEV+ + + YD
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI----GTPYWMAPEVVMCETSKDRPYD- 192
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE---FVYPPWISTDAKRLISKLL 247
KAD+WS G+ L + P + N M + K+ K+E P S++ K + K L
Sbjct: 193 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCL 252
Query: 248 VSDPERRITIQSIMRVPWFRKGFTRPV 274
+ + R T +++ P+ +P+
Sbjct: 253 EKNVDARWTTSQLLQHPFVTVDSNKPI 279
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 40/291 (13%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY +G+GT+ V Y Q GE+ A+K I ++ + E + REIS+++ ++H
Sbjct: 3 KYHGLEKIGEGTYG-VVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHS 60
Query: 71 NVVELREVMATKKKIFVAMEYV-KGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V+L +V+ TKK++ + E++ + + V G L A+ + QL++ + +CH R
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLS---ALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
V HR I+DFGL+ +P + ++ T Y AP+VL
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-----TLWYRAPDVLMGS 175
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKV----------------FK 226
+ D+WS G I ++ G F + + +M ++R + +
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 227 AEF-VYP--PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
F VY PW + L+SK+L DP +RIT + + +F++
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY +G+GT+ V Y Q GE+ A+K I ++ + E + REIS+++ ++H
Sbjct: 3 KYHGLEKIGEGTYG-VVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHS 60
Query: 71 NVVELREVMATKKKIFVAMEYV-KGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V+L +V+ TKK++ + E++ + + V G L A+ + QL++ + +CH R
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
V HR I+DFGL+ A +R + T Y AP+VL
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK---YTHEVVTLWYRAPDVLMGSKK 177
Query: 189 DGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKV----------------FKAE 228
+ D+WS G I ++ G F + + +M ++R + +
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 229 F-VYP--PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
F VY PW + L+SK+L DP +RIT + + +F++
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY +G+GT+ V Y Q GE+ A+K I ++ + E + REIS+++ ++H
Sbjct: 3 KYHGLEKIGEGTYG-VVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHS 60
Query: 71 NVVELREVMATKKKIFVAMEYV-KGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V+L +V+ TKK++ + E++ + + V G L A+ + QL++ + +CH R
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
V HR I+DFGL+ A +R + T Y AP+VL
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK---YTHEVVTLWYRAPDVLMGSKK 177
Query: 189 DGSKADLWSCGVILYVLLAGFLPF----QDENIMNMYRKV----------------FKAE 228
+ D+WS G I ++ G F + + +M ++R + +
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 229 F-VYP--PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
F VY PW + L+SK+L DP +RIT + + +F++
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 40/290 (13%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KYE +G+GT+ V+ K T E VA+K + D E + REI +++ ++H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHK 61
Query: 71 NVVELREVMATKKKIFVAMEYV-KGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
N+V L +V+ + KK+ + E+ + + + G L ++ + + QL+ + FCHSR
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLS---ALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
V HR +++FGL+ +P + + + T Y P+VL
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS-----AEVVTLWYRPPDVLFGA 176
Query: 187 GYDGSKADLWSCGVILYVLL-AGFLPFQDENIMNMYRKVF-------------------- 225
+ D+WS G I L AG F ++ + +++F
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 226 KAEFVYP---------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
K +YP P ++ + L+ LL +P +RI+ + ++ P+F
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG GT+A VY G TG VA+K + D +E REIS+M+ ++H N+V L +
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 78 VMATKKKIFVAMEYVKG-------GELFAKVARGRLREDLARKYFQ-QLISAVDFCHSRG 129
V+ T+ K+ + E++ RG L +L KYFQ QL+ + FCH
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRG-LELNLV-KYFQWQLLQGLAFCHENK 128
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLS---ALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR + DFGL+ +P ++ T Y AP+VL
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-----TFSSEVVTLWYRAPDVLMGS 183
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVF 225
+ D+WSCG IL ++ G F N + +F
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF 222
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 43/289 (14%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E +LG+G F +V + + AIK I + K + I E+ ++ + H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK----LSTILSEVMLLASLNHQY 63
Query: 72 VVE-----------LREVMATKKK--IFVAMEYVKGGELFAKVARGRLRE--DLARKYFQ 116
VV ++ + A KKK +F+ MEY + G L+ + L + D + F+
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSA---------------LPEQ 161
Q++ A+ + HS+G+ HR I DFGL+ LP
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 162 LRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMY 221
N L + GT YVA EVL G+ K D++S G+I + ++ F + +N+
Sbjct: 184 SDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMER--VNIL 238
Query: 222 RKVFKAEFVYPPWISTDA----KRLISKLLVSDPERRITIQSIMRVPWF 266
+K+ +PP + K++I L+ DP +R ++++ W
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 25/269 (9%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKK-EFMMEQIKREISVMRLV 67
F + + ++G G F KVY + G+ VA+K D + +E +++E + ++
Sbjct: 6 FAELTLEEIIGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHS 127
+HPN++ LR V + + + ME+ +GG L ++ R+ D+ + Q+ +++ H
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 128 RGVS---HRXXXXXXXXX--------XXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA 176
+ HR I+DFGL+ E R + + G A
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKM--SAAGAYA 179
Query: 177 YVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWIS 236
++APEV+R + +D+WS GV+L+ LL G +PF+ + + + V + P I
Sbjct: 180 WMAPEVIRASMFS-KGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP--IP 236
Query: 237 TDAKRLISKLL----VSDPERRITIQSIM 261
+ +KL+ DP R + +I+
Sbjct: 237 STCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 16/255 (6%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
+LGKGT+ VY G+ L +AIK I + + + + EI++ + ++H N+V+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE---RDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 77 EVMATKKKIFVAMEYVKGGELFA--KVARGRLR--EDLARKYFQQLISAVDFCHSRGVSH 132
+ I + ME V GG L A + G L+ E Y +Q++ + + H + H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 133 RXXX-XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK--KGYD 189
R ISDFG S + + T GT Y+APE++ K +GY
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGI--NPCTETFTGTLQYMAPEIIDKGPRGY- 202
Query: 190 GSKADLWSCGVILYVLLAGFLPFQD--ENIMNMYR-KVFKAEFVYPPWISTDAKRLISKL 246
G AD+WS G + + G PF + E M++ +FK P +S +AK I K
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKC 262
Query: 247 LVSDPERRITIQSIM 261
DP++R ++
Sbjct: 263 FEPDPDKRACANDLL 277
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 18/272 (6%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME---QIKRE 60
E+ L +Y++G LLG G VY G ++ VAIK + KD++ + ++ E
Sbjct: 45 EKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 61 ISVMRLVRH--PNVVELREVMATKKKIFVAMEYVKG-GELFAKVA-RGRLREDLARKYFQ 116
+ +++ V V+ L + + +E + +LF + RG L+E+LAR +F
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 164
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQCGTP 175
Q++ AV CH+ GV HR + DFG AL D + GT
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDFDGTR 220
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI 235
Y PE +R Y G A +WS G++LY ++ G +PF+ + ++ + + + +
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRV 274
Query: 236 STDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
S++ + LI L P R T + I PW +
Sbjct: 275 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 10/244 (4%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRL 66
++ +Y++ LG G + VY + + VAIK I +KE +++ +RE+
Sbjct: 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ 67
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAVDFC 125
+ H N+V + +V ++ MEY++G L + + G L D A + Q++ +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ--CGTPAYVAPEVL 183
H + HR I DFG++ + L L T GT Y +PE
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIA---KALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 184 RKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLI 243
+ + D D++S G++LY +L G PF E +++ K + P ++TD ++ I
Sbjct: 185 KGEATDEC-TDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV---PNVTTDVRKDI 240
Query: 244 SKLL 247
+ L
Sbjct: 241 PQSL 244
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 111/231 (48%), Gaps = 28/231 (12%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVI-----NKDQLKKEFMMEQI 57
+E + F + E+G L+GKG F +VY+G+ GE VAI++I N+DQLK
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGR--WHGE-VAIRLIDIERDNEDQLKA------F 76
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDL--ARKYF 115
KRE+ R RH NVV + + + KG L++ V ++ D+ R+
Sbjct: 77 KREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIA 136
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGL---SALPEQLRNDGLLHTQC 172
Q+++ + + H++G+ H+ I+DFGL S + + R + L Q
Sbjct: 137 QEIVKGMGYLHAKGILHK-DLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQN 195
Query: 173 GTPAYVAPEVLRKKGYDGSK--------ADLWSCGVILYVLLAGFLPFQDE 215
G ++APE++R+ D + +D+++ G I Y L A PF+ +
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 125/295 (42%), Gaps = 49/295 (16%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVI---NKDQLKKEFMMEQIKREISVMRLV 67
KYE +G+G++ V+ + TG+ VAIK D + K+ + REI +++ +
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL----REIRMLKQL 59
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFC 125
+HPN+V L EV K+++ + EY L + RG + E L + Q + AV+FC
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-VPEHLVKSITWQTLQAVNFC 118
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSAL---PEQLRNDGLLHTQCGTPAYVAPEV 182
H HR + DFG + L P +D + T Y +PE+
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD-----EVATRWYRSPEL 173
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAG--FLPFQDE------------NIMNMYRKVFKA- 227
L G D+W+ G + LL+G P + + +++ +++VF
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN 233
Query: 228 -----------EFVYP-----PWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
E + P P IS A L+ L DP R+T + ++ P+F
Sbjct: 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 16/255 (6%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
+LGKGT+ VY G+ L +AIK I + + + + EI++ + ++H N+V+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE---RDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVAR--GRLR--EDLARKYFQQLISAVDFCHSRGVSH 132
+ I + ME V GG L A + G L+ E Y +Q++ + + H + H
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 133 RXXX-XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK--KGYD 189
R ISDFG S + + T GT Y+APE++ K +GY
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGI--NPCTETFTGTLQYMAPEIIDKGPRGY- 188
Query: 190 GSKADLWSCGVILYVLLAGFLPFQD--ENIMNMYR-KVFKAEFVYPPWISTDAKRLISKL 246
G AD+WS G + + G PF + E M++ +FK P +S +AK I K
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKC 248
Query: 247 LVSDPERRITIQSIM 261
DP++R ++
Sbjct: 249 FEPDPDKRACANDLL 263
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 55/307 (17%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + G +VA+K +++ + + ++ RE+ +++ V
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRAYRELVLLKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V L + Q++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
+ HS G+ HR I DFGL+ + ++ T Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA---RTACTNFMMTPYVVTRYYRAPE 195
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------AEF------ 229
V+ GY + D+WS G I+ L+ G + FQ + ++ + KV + AEF
Sbjct: 196 VILGMGY-AANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 254
Query: 230 -------------------VYPPWI-----------STDAKRLISKLLVSDPERRITIQS 259
++P WI ++ A+ L+SK+LV DP++RI++
Sbjct: 255 TVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDE 314
Query: 260 IMRVPWF 266
+R P+
Sbjct: 315 ALRHPYI 321
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVI---NKDQLKKEFMMEQIKREISVMRLV 67
KYE L+G+G++ V + TG VAIK + D++ K+ M REI +++ +
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM----REIKLLKQL 81
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGG-----ELFAKVARGRLREDLARKYFQQLISAV 122
RH N+V L EV KK+ ++ E+V ELF L + +KY Q+I+ +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGI 137
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS---ALPEQLRNDGLLHTQCGTPAYVA 179
FCHS + HR + DFG + A P ++ +D + T Y A
Sbjct: 138 GFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD-----EVATRWYRA 192
Query: 180 PEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQ-DENIMNMYR 222
PE+L G D+W+ G ++ + G F D +I +Y
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYH 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 31/308 (10%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVM-RLVR 68
G +E+ L+G GT+ +VY G+ + TG+ AIKV++ ++ E+IK+EI+++ +
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----EEIKQEINMLKKYSH 79
Query: 69 HPNVVELREVMATKK------KIFVAMEYVKGG---ELFAKVARGRLREDLARKYFQQLI 119
H N+ K ++++ ME+ G +L L+E+ ++++
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL-RNDGLLHTQCGTPAYV 178
+ H V HR + DFG+SA QL R G +T GTP ++
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA---QLDRTVGRRNTFIGTPYWM 196
Query: 179 APEVLR-KKGYDGS---KADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPW 234
APEV+ + D + K+DLWS G+ + G P D M+ R +F P
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD---MHPMRALFLIPRNPAPR 253
Query: 235 I-----STDAKRLISKLLVSDPERRITIQSIMRVPWFR-KGFTRPVAFSITQHXXXXXXX 288
+ S + I LV + +R + +M+ P+ R + R V + H
Sbjct: 254 LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTKKK 313
Query: 289 QAATEKTE 296
+ ++TE
Sbjct: 314 RGEKDETE 321
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKR---EISVMRL 66
G +EM LG G F V TGE VAIK Q ++E + +R EI +M+
Sbjct: 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIK-----QCRQELSPKNRERWCLEIQIMKK 68
Query: 67 VRHPNVVELREV------MATKKKIFVAMEYVKGGELFAKVAR----GRLREDLARKYFQ 116
+ HPNVV REV +A +AMEY +GG+L + + L+E R
Sbjct: 69 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA 176
+ SA+ + H + HR I ++L L GT
Sbjct: 129 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ 188
Query: 177 YVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPF 212
Y+APE+L +K Y + D WS G + + + GF PF
Sbjct: 189 YLAPELLEQKKYTVT-VDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKR---EISVMRL 66
G +EM LG G F V TGE VAIK Q ++E + +R EI +M+
Sbjct: 15 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIK-----QCRQELSPKNRERWCLEIQIMKK 69
Query: 67 VRHPNVVELREV------MATKKKIFVAMEYVKGGELFAKVAR----GRLREDLARKYFQ 116
+ HPNVV REV +A +AMEY +GG+L + + L+E R
Sbjct: 70 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA 176
+ SA+ + H + HR I ++L L GT
Sbjct: 130 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ 189
Query: 177 YVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPF 212
Y+APE+L +K Y + D WS G + + + GF PF
Sbjct: 190 YLAPELLEQKKYTVT-VDYWSFGTLAFECITGFRPF 224
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 55/307 (17%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + G +VA+K +++ + + ++ RE+ +++ V
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRAYRELVLLKCV 78
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V L + Q++
Sbjct: 79 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLCG 136
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE 181
+ HS G+ HR I DFGL+ + ++ T Y APE
Sbjct: 137 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA---RTASTNFMMTPYVVTRYYRAPE 193
Query: 182 VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------AEF------ 229
V+ GY D+WS G I+ L+ G + FQ + ++ + KV + AEF
Sbjct: 194 VILGMGYK-ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 252
Query: 230 -------------------VYPPWI-----------STDAKRLISKLLVSDPERRITIQS 259
++P WI ++ A+ L+SK+LV DP++RI++
Sbjct: 253 TVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDE 312
Query: 260 IMRVPWF 266
+R P+
Sbjct: 313 ALRHPYI 319
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 43/289 (14%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E +LG+G F +V + + AIK I + K + I E+ ++ + H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK----LSTILSEVMLLASLNHQY 63
Query: 72 VVE-----------LREVMATKKK--IFVAMEYVKGGELFAKVARGRLRE--DLARKYFQ 116
VV ++ + A KKK +F+ MEY + L+ + L + D + F+
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSA---------------LPEQ 161
Q++ A+ + HS+G+ HR I DFGL+ LP
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 162 LRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMY 221
N L + GT YVA EVL G+ K D++S G+I + ++ F + +N+
Sbjct: 184 SDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMER--VNIL 238
Query: 222 RKVFKAEFVYPPWISTD----AKRLISKLLVSDPERRITIQSIMRVPWF 266
+K+ +PP + K++I L+ DP +R ++++ W
Sbjct: 239 KKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 24/257 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIK---REISVMRLVRHPNVVE 74
+G G+F V+ + G VA+K++ ++++F E++ RE+++M+ +RHPN+V
Sbjct: 45 IGAGSFGTVHRAE--WHGSDVAVKIL----MEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK----YFQQLISAVDFCHSRG- 129
+ + + EY+ G L+ + + RE L + + +++ H+R
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 130 -VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ--CGTPAYVAPEVLRKK 186
+ HR + DFGLS +L+ L ++ GTP ++APEVLR +
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLS----RLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-FKAE-FVYPPWISTDAKRLIS 244
+ K+D++S GVIL+ L P+ + N + V FK + P ++ +I
Sbjct: 215 PSN-EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIE 273
Query: 245 KLLVSDPERRITIQSIM 261
++P +R + +IM
Sbjct: 274 GCWTNEPWKRPSFATIM 290
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+GT+A VY GK +T VA+K I + +E RE+S+++ ++H N+V L +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 78 VMATKKKIFVAMEYV-KGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXX 136
++ T+K + + EY+ K + + + + + QL+ + +CH + V HR
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 137 XXXXXXXXXXXXXISDFGLS---ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKA 193
++DFGL+ ++P + ++ ++ T Y P++L ++
Sbjct: 128 PQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-----TLWYRPPDILLGSTDYSTQI 182
Query: 194 DLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA-------------------EFVYP-- 232
D+W G I Y + G F + +F+ + YP
Sbjct: 183 DMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKY 242
Query: 233 ---------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
P + +D L++KLL + RI+ + M+ P+F
Sbjct: 243 RAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 12 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 67
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 68 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + + G+ ++APEV+R +
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 217
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 24/257 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIK---REISVMRLVRHPNVVE 74
+G G+F V+ + G VA+K++ ++++F E++ RE+++M+ +RHPN+V
Sbjct: 45 IGAGSFGTVHRAE--WHGSDVAVKIL----MEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK----YFQQLISAVDFCHSRG- 129
+ + + EY+ G L+ + + RE L + + +++ H+R
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 130 -VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ--CGTPAYVAPEVLRKK 186
+ HR + DFGLS +L+ L ++ GTP ++APEVLR +
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLS----RLKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-FKAE-FVYPPWISTDAKRLIS 244
+ K+D++S GVIL+ L P+ + N + V FK + P ++ +I
Sbjct: 215 PSN-EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIE 273
Query: 245 KLLVSDPERRITIQSIM 261
++P +R + +IM
Sbjct: 274 GCWTNEPWKRPSFATIM 290
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 52/277 (18%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV-MRLVRHPNVVE 74
++LG G KV T E A+K++ + +RE+ + R + P++V
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVR 75
Query: 75 LREVM----ATKKKIFVAMEYVKGGELFAKVA-RG--RLREDLARKYFQQLISAVDFCHS 127
+ +V A +K + + ME + GGELF+++ RG E A + + + A+ + HS
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 128 RGVSHRXXXXXXXXXXXXXXXXI---SDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLR 184
++HR I +DFG A E
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGF-----------------------AKETTG 172
Query: 185 KKGYDGSKADLWSCGVILYVLLAGFLPFQDEN------IMNMYRKVFKAEFVYPPW--IS 236
+K YD S D+WS GVI+Y+LL G+ PF + M ++ + EF P W +S
Sbjct: 173 EK-YDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 230
Query: 237 TDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ K LI LL ++P +R+TI M PW + P
Sbjct: 231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 267
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 24 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 79
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 80 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + G+ ++APEV+R +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 10 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 65
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 66 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + + G+ ++APEV+R +
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 215
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 13 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 68
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 69 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + + G+ ++APEV+R +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 13 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 68
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 69 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + + G+ ++APEV+R +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 35 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 90
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 91 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + + G+ ++APEV+R +
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 36 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 91
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 92 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + + G+ ++APEV+R +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 63
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 64 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + + G+ ++APEV+R +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 27/245 (11%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV 63
+RHVL KYE+ + LGKG + V+ TGE VA+K I D + ++ REI +
Sbjct: 4 DRHVL-RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMI 61
Query: 64 M-RLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-FQQLI 119
+ L H N+V L V+ + +++ +Y++ +L A V R + E + ++Y QLI
Sbjct: 62 LTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHA-VIRANILEPVHKQYVVYQLI 119
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS---------------ALPEQLRN 164
+ + HS G+ HR ++DFGLS ++ E N
Sbjct: 120 KVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 165 ----DGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNM 220
+L T Y APE+L D+WS G IL +L G F + MN
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 221 YRKVF 225
++
Sbjct: 240 LERII 244
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+GKG F V G G VA+K I D + F+ E SVM +RH N+V+L
Sbjct: 201 IGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLAEA-----SVMTQLRHSNLVQLLG 253
Query: 78 VMATKK-KIFVAMEYVKGGELFAKV-ARGR--LREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ +K +++ EY+ G L + +RGR L D K+ + A+++ HR
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 313
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKA 193
+SDFGL+ ++ G L + + APE LR+K + +K+
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALREKKFS-TKS 367
Query: 194 DLWSCGVILYVLLA-GFLPF 212
D+WS G++L+ + + G +P+
Sbjct: 368 DVWSFGILLWEIYSFGRVPY 387
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+GKG F V G G VA+K I D + F+ E SVM +RH N+V+L
Sbjct: 29 IGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLAEA-----SVMTQLRHSNLVQLLG 81
Query: 78 VMATKK-KIFVAMEYVKGGELFAKV-ARGR--LREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ +K +++ EY+ G L + +RGR L D K+ + A+++ HR
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 141
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKA 193
+SDFGL+ ++ G L + + APE LR+K + +K+
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALREKKFS-TKS 195
Query: 194 DLWSCGVILYVLLA-GFLPF 212
D+WS G++L+ + + G +P+
Sbjct: 196 DVWSFGILLWEIYSFGRVPY 215
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 21/258 (8%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGESVAIKVINK---DQLKKEFMMEQIKREISVMRLVRHP 70
+G +G+G F +V+ G+ VA+K + LK +F+ +E +++ HP
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-----QEARILKQYSHP 172
Query: 71 NVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSR 128
N+V L V K+ I++ ME V+GG+ F + RLR + + +++ S+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG---TPA-YVAPEVLR 184
HR ISDFG+S + DG+ G P + APE L
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMS----REEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 185 KKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK-RL 242
Y S++D+WS G++L+ + G P+ + + V K + P + DA RL
Sbjct: 289 YGRYS-SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRL 347
Query: 243 ISKLLVSDPERRITIQSI 260
+ + +P +R + +I
Sbjct: 348 MEQCWAYEPGQRPSFSTI 365
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+GKG F V G G VA+K I D + F+ E SVM +RH N+V+L
Sbjct: 14 IGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLAEA-----SVMTQLRHSNLVQLLG 66
Query: 78 VMATKK-KIFVAMEYVKGGELFAKV-ARGR--LREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ +K +++ EY+ G L + +RGR L D K+ + A+++ HR
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 126
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKA 193
+SDFGL+ ++ G L + + APE LR+K + +K+
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALREKKF-STKS 180
Query: 194 DLWSCGVILYVLLA-GFLPF 212
D+WS G++L+ + + G +P+
Sbjct: 181 DVWSFGILLWEIYSFGRVPY 200
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 36/267 (13%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
L+G G F +V+ K + G++ IK + ++ E+ +RE+ + + H N+V
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRV-------KYNNEKAEREVKALAKLDHVNIVHYN 70
Query: 77 ----------------EVMATKKKIFVAMEYVKGGELFAKVARGR---LREDLARKYFQQ 117
+ K +F+ ME+ G L + + R L + LA + F+Q
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
+ VD+ HS+ + +R I DFGL L+NDG GT Y
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT---SLKNDGKRXRSKGTLRY 187
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILYVLL-AGFLPFQDENIMNMYRKVFKAEFVYPPWIS 236
++PE + + Y G + DL++ G+IL LL F+ R + +
Sbjct: 188 MSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFETSKFFTDLR-----DGIISDIFD 241
Query: 237 TDAKRLISKLLVSDPERRITIQSIMRV 263
K L+ KLL PE R I+R
Sbjct: 242 KKEKTLLQKLLSKKPEDRPNTSEILRT 268
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 21/258 (8%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGESVAIKVINK---DQLKKEFMMEQIKREISVMRLVRHP 70
+G +G+G F +V+ G+ VA+K + LK +F+ +E +++ HP
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-----QEARILKQYSHP 172
Query: 71 NVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSR 128
N+V L V K+ I++ ME V+GG+ F + RLR + + +++ S+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG---TPA-YVAPEVLR 184
HR ISDFG+S + DG+ G P + APE L
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMS----REEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 185 KKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAEFVYPPWISTDAK-RL 242
Y S++D+WS G++L+ + G P+ + + V K + P + DA RL
Sbjct: 289 YGRYS-SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRL 347
Query: 243 ISKLLVSDPERRITIQSI 260
+ + +P +R + +I
Sbjct: 348 MEQCWAYEPGQRPSFSTI 365
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 22/204 (10%)
Query: 15 GRLLGKGTFAKVYYGKQLMTGESVAIKVINK--DQLKKEFMMEQIKREISVMRLVRHPNV 72
G +LGKG F + TGE + +K + + ++ ++ F+ +E+ VMR + HPNV
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL-----KEVKVMRCLEHPNV 69
Query: 73 VELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK--YFQQLISAVDFCHSRGV 130
++ V+ K++ EY+KGG L + + +++ + + + S + + HS +
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSAL-------PEQLR-----NDGLLHTQCGTPAYV 178
HR ++DFGL+ L PE LR + +T G P ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 179 APEVLRKKGYDGSKADLWSCGVIL 202
APE++ + YD K D++S G++L
Sbjct: 190 APEMINGRSYD-EKVDVFSFGIVL 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 24 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 79
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +T ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 80 VNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + G+ ++APEV+R +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 28 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 83
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 84 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + G+ ++APEV+R +
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 43/289 (14%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E +LG+G F +V + + AIK I + K + I E+ ++ + H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK----LSTILSEVXLLASLNHQY 63
Query: 72 VVE-----------LREVMATKKK--IFVAMEYVKGGELFAKVARGRLRE--DLARKYFQ 116
VV ++ A KKK +F+ EY + L+ + L + D + F+
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSA---------------LPEQ 161
Q++ A+ + HS+G+ HR I DFGL+ LP
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 162 LRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMY 221
N L + GT YVA EVL G+ K D +S G+I + + F + +N+
Sbjct: 184 SDN---LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXER--VNIL 238
Query: 222 RKVFKAEFVYPPWISTD----AKRLISKLLVSDPERRITIQSIMRVPWF 266
+K+ +PP + K++I L+ DP +R ++++ W
Sbjct: 239 KKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 36 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 91
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 92 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + G+ ++APEV+R +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 63
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +TK ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 64 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + G+ ++APEV+R +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 48/301 (15%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ LLG+G + V TGE VAIK I + K + REI +++ +H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKHEN 70
Query: 72 VVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCH 126
++ + + ++++ E ++ +L ++ L +D + + Q + AV H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT--QCGTPAYVA----- 179
V HR + DFGL+ + ++ D T Q G YVA
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 180 -PEVLRKKGYDGSKADLWSCGVIL------------------YVLLAGFL--PFQDENIM 218
PEV+ D+WSCG IL +L+ G + P D ++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 219 NM----YRKVFKAEFVYP--------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
+ R+ K+ +YP P ++ L+ ++LV DP +RIT + + P+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 267 R 267
+
Sbjct: 310 Q 310
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+GKG F V G G VA+K I D + F+ E SVM +RH N+V+L
Sbjct: 20 IGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLAEA-----SVMTQLRHSNLVQLLG 72
Query: 78 VMATKK-KIFVAMEYVKGGELFAKV-ARGR--LREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ +K +++ EY+ G L + +RGR L D K+ + A+++ HR
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 132
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKA 193
+SDFGL+ ++ G L + + APE LR+ + +K+
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-----WTAPEALREAAFS-TKS 186
Query: 194 DLWSCGVILYVLLA-GFLPF 212
D+WS G++L+ + + G +P+
Sbjct: 187 DVWSFGILLWEIYSFGRVPY 206
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
G+ +G+ +G G+F VY GK G+ VA+K++N + ++ K E+ V+R RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRH 63
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
N++ L +T ++ + ++ +G L+ + + ++ + +Q +D+ H+
Sbjct: 64 VNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
+ + HR I DFGL+ + + G+ ++APEV+R +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 188 YD--GSKADLWSCGVILYVLLAGFLPFQDEN 216
+ ++D+++ G++LY L+ G LP+ + N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L KY+ +G+GT+ VY K G VA+K I D + E + REIS+++ +
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA-EDEGIPSTAIREISLLKEL 76
Query: 68 RHPNVVELREVMATKKKIFVAMEYV-KGGELFAKVARGRLREDLARKYFQQLISAVDFCH 126
HPN+V L +V+ +++ + + E++ K + + L++ + Y QL+ V CH
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
+ HR ++DFGL+ A +R+ + T Y AP+VL
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS---YTHEVVTLWYRAPDVLMG 193
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMY-------------------- 221
+ D+WS G I ++ G F D+ + ++
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 222 -RKVFKAEFVYPPWIST------DAKRLISKLLVSDPERRITIQSIMRVPWFR 267
++ F+ F PW S + L+S +L DP +RI+ + M P+F+
Sbjct: 254 KQRTFQV-FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 39/293 (13%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
L KY+ +G+GT+ VY K G VA+K I D + E + REIS+++ +
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDA-EDEGIPSTAIREISLLKEL 76
Query: 68 RHPNVVELREVMATKKKIFVAMEYV-KGGELFAKVARGRLREDLARKYFQQLISAVDFCH 126
HPN+V L +V+ +++ + + E++ K + + L++ + Y QL+ V CH
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
+ HR ++DFGL+ A +R+ + T Y AP+VL
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS---YTHEVVTLWYRAPDVLMG 193
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF----QDENIMNMY-------------------- 221
+ D+WS G I ++ G F D+ + ++
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 222 -RKVFKAEFVYPPWIST------DAKRLISKLLVSDPERRITIQSIMRVPWFR 267
++ F+ F PW S + L+S +L DP +RI+ + M P+F+
Sbjct: 254 KQRTFQV-FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINK-DQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
+G G+F VY GK G+ VA+K++ D ++F + + E++V+R RH N++
Sbjct: 44 IGSGSFGTVYKGK--WHGD-VAVKILKVVDPTPEQF--QAFRNEVAVLRKTRHVNILLFM 98
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGRLR------EDLARKYFQQLISAVDFCHSRGV 130
M TK + + ++ +G L+ + + D+AR+ Q +D+ H++ +
Sbjct: 99 GYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ----GMDYLHAKNI 153
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD- 189
HR I DFGL+ + + + G+ ++APEV+R + +
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 190 -GSKADLWSCGVILYVLLAGFLPFQDEN 216
++D++S G++LY L+ G LP+ N
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHIN 241
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-DQLKKEFMMEQIKREI 61
+ER + G G +G+G F VY G + +VA+K + + E + +Q +EI
Sbjct: 28 DERPISVG----GNKMGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEI 81
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA----RGRLREDLARKYFQQ 117
VM +H N+VEL + + + Y+ G L +++ L + K Q
Sbjct: 82 KVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQG 141
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
+ ++F H HR ISDFGL+ E+ + GT AY
Sbjct: 142 AANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN 216
+APE LR G K+D++S GV+L ++ G LP DE+
Sbjct: 202 MAPEALR--GEITPKSDIYSFGVVLLEIITG-LPAVDEH 237
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-DQLKKEFMMEQIKREI 61
+ER + G G +G+G F VY G + +VA+K + + E + +Q +EI
Sbjct: 28 DERPISVG----GNKMGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEI 81
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA----RGRLREDLARKYFQQ 117
VM +H N+VEL + + + Y+ G L +++ L + K Q
Sbjct: 82 KVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQG 141
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
+ ++F H HR ISDFGL+ E+ + GT AY
Sbjct: 142 AANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAY 201
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN 216
+APE LR G K+D++S GV+L ++ G LP DE+
Sbjct: 202 MAPEALR--GEITPKSDIYSFGVVLLEIITG-LPAVDEH 237
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 48/301 (15%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ LLG+G + V TGE VAIK I + K + REI +++ +H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKHEN 70
Query: 72 VVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCH 126
++ + + ++++ E ++ +L ++ L +D + + Q + AV H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT--QCG------TPAYV 178
V HR + DFGL+ + ++ D T Q G T Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 179 APEVLRKKGYDGSKADLWSCGVIL------------------YVLLAGFL--PFQDENIM 218
APEV+ D+WSCG IL +L+ G + P D ++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 219 NM----YRKVFKAEFVYP--------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
+ R+ K+ +YP P ++ L+ ++LV DP +RIT + + P+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 267 R 267
+
Sbjct: 310 Q 310
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 48/301 (15%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+++ LLG+G + V TGE VAIK I + K + REI +++ +H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKHEN 70
Query: 72 VVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCH 126
++ + + ++++ E ++ +L ++ L +D + + Q + AV H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT--QCG------TPAYV 178
V HR + DFGL+ + ++ D T Q G T Y
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 179 APEVLRKKGYDGSKADLWSCGVIL------------------YVLLAGFL--PFQDENIM 218
APEV+ D+WSCG IL +L+ G + P D ++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 219 NM----YRKVFKAEFVYP--------PWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
+ R+ K+ +YP P ++ L+ ++LV DP +RIT + + P+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Query: 267 R 267
+
Sbjct: 310 Q 310
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 14/219 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIK-VINKDQLKKEFMMEQIKREI 61
+ER + G G +G+G F VY G + +VA+K + + E + +Q +EI
Sbjct: 22 DERPISVG----GNKMGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEI 75
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVA----RGRLREDLARKYFQQ 117
VM +H N+VEL + + + Y+ G L +++ L + K Q
Sbjct: 76 KVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQG 135
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
+ ++F H HR ISDFGL+ E+ + GT AY
Sbjct: 136 AANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN 216
+APE LR G K+D++S GV+L ++ G LP DE+
Sbjct: 196 MAPEALR--GEITPKSDIYSFGVVLLEIITG-LPAVDEH 231
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R+LG+G F +V+ + TG+ A K +NK +LKK + E ++ V +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 76 REVMATKKKIFVAMEYVKGGELFAKV-----ARGRLREDLARKYFQQLISAVDFCHSRGV 130
TK + + M + GG++ + +E A Y Q++S ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA--LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
+R ISD GL+ Q + G GTP ++APE+L + Y
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLLGEEY 366
Query: 189 DGSKADLWSCGVILYVLLAGFLPF--QDENIMN--MYRKVFKAEFVYPPWISTDAKRLIS 244
D S D ++ GV LY ++A PF + E + N + ++V + YP S +K
Sbjct: 367 DFS-VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 245 KLLVSDPERRI 255
LL DPE+R+
Sbjct: 426 ALLQKDPEKRL 436
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 110/280 (39%), Gaps = 49/280 (17%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
L+G G F +V+ K + G++ I+ + ++ E+ +RE+ + + H N+V
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRV-------KYNNEKAEREVKALAKLDHVNIVHYN 71
Query: 77 -----------------------------EVMATKKKIFVAMEYVKGGELFAKVARGR-- 105
+ K +F+ ME+ G L + + R
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 106 -LREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
L + LA + F+Q+ VD+ HS+ + HR I DFGL L+N
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT---SLKN 188
Query: 165 DGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLL-AGFLPFQDENIMNMYRK 223
DG GT Y++PE + + Y G + DL++ G+IL LL F+ R
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFETSKFFTDLR- 246
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRV 263
+ + K L+ KLL PE R I+R
Sbjct: 247 ----DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRT 282
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R+LG+G F +V+ + TG+ A K +NK +LKK + E ++ V +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 76 REVMATKKKIFVAMEYVKGGELFAKV-----ARGRLREDLARKYFQQLISAVDFCHSRGV 130
TK + + M + GG++ + +E A Y Q++S ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA--LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
+R ISD GL+ Q + G GTP ++APE+L + Y
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLLGEEY 366
Query: 189 DGSKADLWSCGVILYVLLAGFLPF--QDENIMN--MYRKVFKAEFVYPPWISTDAKRLIS 244
D S D ++ GV LY ++A PF + E + N + ++V + YP S +K
Sbjct: 367 DFS-VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 245 KLLVSDPERRI 255
LL DPE+R+
Sbjct: 426 ALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R+LG+G F +V+ + TG+ A K +NK +LKK + E ++ V +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 76 REVMATKKKIFVAMEYVKGGELFAKV-----ARGRLREDLARKYFQQLISAVDFCHSRGV 130
TK + + M + GG++ + +E A Y Q++S ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA--LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
+R ISD GL+ Q + G GTP ++APE+L + Y
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLLGEEY 366
Query: 189 DGSKADLWSCGVILYVLLAGFLPF--QDENIMN--MYRKVFKAEFVYPPWISTDAKRLIS 244
D S D ++ GV LY ++A PF + E + N + ++V + YP S +K
Sbjct: 367 DFS-VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 245 KLLVSDPERRI 255
LL DPE+R+
Sbjct: 426 ALLQKDPEKRL 436
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 26/258 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLM---TGESVAIKV---INKDQLKKEFMMEQIKREISVM 64
+ E+GR +G+G F V+ G + +VAIK D ++++F+ E + M
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-----TM 65
Query: 65 RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAV 122
R HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A+
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAYV 178
+ S+ HR + DFGLS E + G L + ++
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK-----WM 179
Query: 179 APEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWIS 236
APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 180 APESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP 238
Query: 237 TDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 239 PTLYSLMTKCWAYDPSRR 256
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R+LG+G F +V+ + TG+ A K +NK +LKK + E ++ V +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 76 REVMATKKKIFVAMEYVKGGELFAKV-----ARGRLREDLARKYFQQLISAVDFCHSRGV 130
TK + + M + GG++ + +E A Y Q++S ++ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSA--LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGY 188
+R ISD GL+ Q + G GTP ++APE+L + Y
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLLGEEY 366
Query: 189 DGSKADLWSCGVILYVLLAGFLPF--QDENIMN--MYRKVFKAEFVYPPWISTDAKRLIS 244
D S D ++ GV LY ++A PF + E + N + ++V + YP S +K
Sbjct: 367 DFS-VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 245 KLLVSDPERRI 255
LL DPE+R+
Sbjct: 426 ALLQKDPEKRL 436
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 26/258 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLM---TGESVAIKV---INKDQLKKEFMMEQIKREISVM 64
+ E+GR +G+G F V+ G + +VAIK D ++++F+ E + M
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-----TM 65
Query: 65 RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAV 122
R HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A+
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAYV 178
+ S+ HR + DFGLS E + G L + ++
Sbjct: 125 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WM 179
Query: 179 APEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWIS 236
APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 180 APESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP 238
Query: 237 TDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 239 PTLYSLMTKCWAYDPSRR 256
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-------DQLKKEFMMEQIKREISV 63
+ E+GR +G+G F V+ G M+ E+ A+ V K D ++++F+ E +
Sbjct: 391 RIELGRCIGEGQFGDVHQGI-YMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-----T 444
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISA 121
MR HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAY 177
+ + S+ HR + DFGLS E + G L + +
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----W 558
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWI 235
+APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 559 MAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 617
Query: 236 STDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 618 PPTLYSLMTKCWAYDPSRR 636
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-------DQLKKEFMMEQIKREISV 63
+ E+GR +G+G F V+ G M+ E+ A+ V K D ++++F+ E +
Sbjct: 13 RIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-----T 66
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISA 121
MR HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A
Sbjct: 67 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 125
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAY 177
+ + S+ HR + DFGLS E + G L + +
Sbjct: 126 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----W 180
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWI 235
+APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 181 MAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 239
Query: 236 STDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 240 PPTLYSLMTKCWAYDPSRR 258
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-------DQLKKEFMMEQIKREISV 63
+ E+GR +G+G F V+ G M+ E+ A+ V K D ++++F+ E +
Sbjct: 14 RIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-----T 67
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISA 121
MR HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A
Sbjct: 68 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 126
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAY 177
+ + S+ HR + DFGLS E + G L + +
Sbjct: 127 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----W 181
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWI 235
+APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 182 MAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 240
Query: 236 STDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 241 PPTLYSLMTKCWAYDPSRR 259
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-------DQLKKEFMMEQIKREISV 63
+ E+GR +G+G F V+ G M+ E+ A+ V K D ++++F+ E +
Sbjct: 16 RIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-----T 69
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISA 121
MR HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A
Sbjct: 70 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAY 177
+ + S+ HR + DFGLS E + G L + +
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----W 183
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWI 235
+APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 184 MAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 242
Query: 236 STDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 243 PPTLYSLMTKCWAYDPSRR 261
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-------DQLKKEFMMEQIKREISV 63
+ E+GR +G+G F V+ G M+ E+ A+ V K D ++++F+ E +
Sbjct: 391 RIELGRCIGEGQFGDVHQGI-YMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-----T 444
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISA 121
MR HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAY 177
+ + S+ HR + DFGLS E + G L + +
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----W 558
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWI 235
+APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 559 MAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 617
Query: 236 STDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 618 PPTLYSLMTKCWAYDPSRR 636
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+GT+ +VY +T E+VAIK I + ++E + RE+S+++ ++H N++EL+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEH-EEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 78 VMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHR-- 133
V+ ++ + EY + + K +R + + + QLI+ V+FCHSR HR
Sbjct: 101 VIHHNHRLHLIFEYAENDLKKYMDKNPDVSMR--VIKSFLYQLINGVNFCHSRRCLHRDL 158
Query: 134 ---XXXXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
I DFGL+ A +R + T Y PE+L +
Sbjct: 159 KPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ---FTHEIITLWYRPPEILLGSRHY 215
Query: 190 GSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA 227
+ D+WS I +L F ++ ++ K+F+
Sbjct: 216 STSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEV 253
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-------DQLKKEFMMEQIKREISV 63
+ E+GR +G+G F V+ G M+ E+ A+ V K D ++++F+ E +
Sbjct: 39 RIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-----T 92
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISA 121
MR HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A
Sbjct: 93 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 151
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAY 177
+ + S+ HR + DFGLS E + G L + +
Sbjct: 152 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----W 206
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWI 235
+APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 207 MAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 265
Query: 236 STDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 266 PPTLYSLMTKCWAYDPSRR 284
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-------DQLKKEFMMEQIKREISV 63
+ E+GR +G+G F V+ G M+ E+ A+ V K D ++++F+ E +
Sbjct: 8 RIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-----T 61
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISA 121
MR HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A
Sbjct: 62 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAY 177
+ + S+ HR + DFGLS E + G L + +
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----W 175
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWI 235
+APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 176 MAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 234
Query: 236 STDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 235 PPTLYSLMTKCWAYDPSRR 253
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-------DQLKKEFMMEQIKREISV 63
+ E+GR +G+G F V+ G M+ E+ A+ V K D ++++F+ E +
Sbjct: 11 RIELGRCIGEGQFGDVHQGI-YMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-----T 64
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISA 121
MR HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAY 177
+ + S+ HR + DFGLS E + G L + +
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----W 178
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWI 235
+APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 179 MAPESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237
Query: 236 STDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 238 PPTLYSLMTKCWAYDPSRR 256
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 26/258 (10%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLM---TGESVAIKV---INKDQLKKEFMMEQIKREISVM 64
+ E+GR +G+G F V+ G + +VAIK D ++++F+ E + M
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-----TM 65
Query: 65 RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAV 122
R HP++V+L V+ T+ +++ ME GEL + + + DLA Y QL +A+
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 123 DFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR----NDGLLHTQCGTPAYV 178
+ S+ HR + DFGLS E + G L + ++
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-----WM 179
Query: 179 APEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-FVYPPWIS 236
APE + + + S +D+W GV ++ +L+ G PFQ ++ ++ E PP
Sbjct: 180 APESINFRRFT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP 238
Query: 237 TDAKRLISKLLVSDPERR 254
L++K DP RR
Sbjct: 239 PTLYSLMTKCWAYDPSRR 256
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 54/304 (17%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREIS 62
E+R + Y +++G G+F V+ K L+ + VAIK + +D+ K RE+
Sbjct: 36 EQREI---AYTNCKVIGNGSFGVVFQAK-LVESDEVAIKKVLQDKRFK-------NRELQ 84
Query: 63 VMRLVRHPNVVELREVMAT----KKKIF--VAMEYVKGGELFAKVARGRLRED----LAR 112
+MR+V+HPNVV+L+ + K ++F + +EYV A +L++ L +
Sbjct: 85 IMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIK 144
Query: 113 KYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXX-XXXISDFGLSALPEQLRNDGLLHTQ 171
Y QL+ ++ + HS G+ HR + DFG + + + + +
Sbjct: 145 LYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI--LIAGEPNVSXI 202
Query: 172 CGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKA---- 227
C Y APE++ + D+WS G ++ L+ G F E+ ++ ++ K
Sbjct: 203 CSR-YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261
Query: 228 -------------EFVYP------------PWISTDAKRLISKLLVSDPERRITIQSIMR 262
E +P P DA LIS+LL P R+T +
Sbjct: 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
Query: 263 VPWF 266
P+F
Sbjct: 322 HPFF 325
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 13 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 64
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 65 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 124
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 125 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 184
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 185 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y + +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP--FEHQTYCQRTLREIQILLRFRHE 101
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ +R+++ + +++ + ++ +L+ + +L D + Q++ + +
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQLSNDHICYFLYQILRGLKYI 160
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A PE + G L T Y APE+
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEH-DHTGFLTEXVATRWYRAPEIM 219
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+NM
Sbjct: 220 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINM 278
Query: 221 YRKVF------KAEFVYP---PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + K + + P + A L+ ++L +P +RIT++ + P+ + +
Sbjct: 279 KARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYD 338
Query: 271 --TRPVA 275
PVA
Sbjct: 339 PTDEPVA 345
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 8 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 59
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 180 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 15 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 66
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 67 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 126
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 127 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 186
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 187 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 11 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 62
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 122
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 183 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 7 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 58
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 59 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 118
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 119 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 178
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 179 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 211
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F R LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 11 EERHLKFL-----RQLGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 62
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + ME++ G L + + + R D + +Y
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQY 122
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 183 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 39 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 90
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 91 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 150
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 151 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 211 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 243
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 21/224 (9%)
Query: 11 KYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV 63
K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E +V
Sbjct: 26 KWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 81
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF----QQLI 119
M+ ++HPN+V+L V + ++ EY+ G L + R RE++ Q+
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQIS 140
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YV 178
SA+++ + HR ++DFGLS L + H P +
Sbjct: 141 SAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRL--MTGDTYTAHAGAKFPIKWT 198
Query: 179 APEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 199 APESLAYNTFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 241
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 14 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 65
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 66 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 125
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 126 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 185
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 186 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 8 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 59
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 180 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 6 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 57
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 58 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 117
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 118 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 177
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 178 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 12 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 63
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 64 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 123
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 124 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 183
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 184 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 11/217 (5%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R +G G+F VY+ + + E VAIK ++ + + I +E+ ++ +RHPN ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 76 REVMATKKKIFVAMEYVKG-GELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
R + ++ MEY G +V + L+E + + + HS + HR
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEV---LRKKGYDGS 191
+ DFG +++ + GTP ++APEV + + YDG
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDG- 232
Query: 192 KADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE 228
K D+WS G+ L P + N M+ + + E
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 269
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 11/217 (5%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R +G G+F VY+ + + E VAIK ++ + + I +E+ ++ +RHPN ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 76 REVMATKKKIFVAMEYVKG-GELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
R + ++ MEY G +V + L+E + + + HS + HR
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEV---LRKKGYDGS 191
+ DFG +++ + GTP ++APEV + + YDG
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDG- 193
Query: 192 KADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE 228
K D+WS G+ L P + N M+ + + E
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 26 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 77
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 198 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 26 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 77
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 198 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 230
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 61
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ +E++ G L + R + + Q+
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 121
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 122 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKW 179
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 180 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 223
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 9 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 60
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 61 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 120
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 121 TSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 181 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 213
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 65
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ +E++ G L + R + + Q+
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 183
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 60
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF---QQL 118
+VM+ ++HPN+V+L V + ++ +E++ G L + +E A Q+
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 178
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 60
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF---QQL 118
+VM+ ++HPN+V+L V + ++ +E++ G L + +E A Q+
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 178
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 65
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKW 183
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 8 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 59
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--KY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + + R D + +Y
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES 179
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 180 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIK 58
EERH+ F + LGKG F V Y Q TGE VA+K K Q E + +
Sbjct: 11 EERHLKFLQQ-----LGKGNFGSVEMCRYDPLQDNTGEVVAVK---KLQHSTEEHLRDFE 62
Query: 59 REISVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKY 114
REI +++ ++H N+V+ + V A ++ + + MEY+ G L + + R+ +Y
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQY 122
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
Q+ +++ ++ HR I DFGL+ + Q + + +
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 175 PAY-VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
P + APE L + + + +D+WS GV+LY L
Sbjct: 183 PIFWYAPESLTESKFSVA-SDVWSFGVVLYELFT 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 267
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF---QQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + +E A Q+
Sbjct: 268 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 327
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTP-AY 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 328 SSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 385
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 386 TAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 429
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 65
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 183
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 264
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 265 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 324
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTP-AY 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 325 SSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 382
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 383 TAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 426
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 60
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF---QQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + +E A Q+
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 178
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 65
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF---QQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + +E A Q+
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 125
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 183
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
KYE +G+GTF +V+ + TG+ VA+K + + K+ F + + REI +++L++H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKH 76
Query: 70 PNVVELREVMATKKK-----------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
NVV L E+ TK +F E+ G L + + L E ++ Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND--GLLHTQCGTPA 176
++ + + H + HR ++DFGL+ +N + T
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 177 YVAPEVLRKKGYDGSKADLWSCGVIL 202
Y PE+L + G DLW G I+
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 73
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 133
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 134 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 191
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 192 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 235
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 306
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 307 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 366
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTP-AY 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 367 SSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 424
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 425 TAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 468
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 65
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 125
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 126 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 183
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 184 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 64
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 124
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 125 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 182
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 183 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 62
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 123 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 180
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 181 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 224
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 60
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF---QQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + +E A Q+
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 178
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 62
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 123 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 180
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 181 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 224
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 60
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 120
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 178
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 19/225 (8%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 60
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 120
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-Y 177
SA+++ + HR ++DFGLS L + H P +
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKW 178
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 179 TAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 111/261 (42%), Gaps = 25/261 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G G + V +GE VAIK +++ + E ++ RE+ +++ ++H NV+ L +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 78 VMATKKKI------FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVS 131
V + ++ M +++ K+ + E+ + Q++ + + HS GV
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 132 HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGS 191
HR I DFGL+ D + T Y APEV+ +
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 192 KADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDP 251
D+WS G I+ +L G F+ ++ ++ ++ K V + KL +D
Sbjct: 204 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV-------PGTEFVQKL--NDK 254
Query: 252 ERRITIQSIMRVPWFRKGFTR 272
+ IQS+ + P RK FT+
Sbjct: 255 AAKSYIQSLPQTP--RKDFTQ 273
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 44/286 (15%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G G + V TG VAIK + + + E ++ RE+ +++ +RH NV+ L +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 78 VMATKKKI------FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVS 131
V + + ++ M ++ G +L + +L ED + Q++ + + H+ G+
Sbjct: 92 VFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII 150
Query: 132 HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGS 191
HR I DFGL+ + D + T Y APEV+
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVILNWMRYTQ 205
Query: 192 KADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------AEFV--------------Y 231
D+WS G I+ ++ G F+ + ++ +++ K AEFV
Sbjct: 206 TVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL 265
Query: 232 PPWISTD-----------AKRLISKLLVSDPERRITIQSIMRVPWF 266
P D A L+ K+LV D E+R+T + P+F
Sbjct: 266 PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KYE +G+GTF +V+ + TG+ VA+K + + K+ F + + REI +++L++H
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHE 77
Query: 71 NVVELREVMATKKK-----------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI 119
NVV L E+ TK +F E+ G L + + L E ++ Q L+
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 135
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND--GLLHTQCGTPAY 177
+ + + H + HR ++DFGL+ +N + T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 178 VAPEVLRKKGYDGSKADLWSCGVIL 202
PE+L + G DLW G I+
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KYE +G+GTF +V+ + TG+ VA+K + + K+ F + + REI +++L++H
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKHE 77
Query: 71 NVVELREVMATKKK-----------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI 119
NVV L E+ TK +F E+ G L + + L E ++ Q L+
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLL 135
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND--GLLHTQCGTPAY 177
+ + + H + HR ++DFGL+ +N + T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 178 VAPEVLRKKGYDGSKADLWSCGVIL 202
PE+L + G DLW G I+
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 10 GKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH 69
KYE +G+GTF +V+ + TG+ VA+K + + K+ F + + REI +++L++H
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITAL-REIKILQLLKH 75
Query: 70 PNVVELREVMATKKK-----------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
NVV L E+ TK +F E+ G L + + L E ++ Q L
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 133
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND--GLLHTQCGTPA 176
++ + + H + HR ++DFGL+ +N + T
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 177 YVAPEVLRKKGYDGSKADLWSCGVIL 202
Y PE+L + G DLW G I+
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIM 219
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 35/274 (12%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMR-LVRHPNVVE 74
R+L +G FA VY + + +G A+K + ++ +K I +E+ M+ L HPN+V+
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN---RAIIQEVCFMKKLSGHPNIVQ 90
Query: 75 LREVMATKKK--------IFVAMEYVKGG--ELFAKV-ARGRLREDLARKYFQQLISAVD 123
+ K+ + E KG E K+ +RG L D K F Q AV
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 124 FCHSR--GVSHRXXXXXXXXXXXXXXXXISDFG----LSALPE---QLRNDGLLH---TQ 171
H + + HR + DFG +S P+ + L+ T+
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 172 CGTPAYVAPEV--LRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEF 229
TP Y PE+ L G K D+W+ G ILY+L PF+D + ++ ++
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL----RIVNGKY 266
Query: 230 VYPPWIS--TDAKRLISKLLVSDPERRITIQSIM 261
PP + T LI +L +PE R++I ++
Sbjct: 267 SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 11 KYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV 63
K+EM R LG G F +VY G +VA+K + +D ++ +E+ +E +V
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 60
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF---QQLIS 120
M+ ++HPN+V+L V + ++ E++ G L + +E A Q+ S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
A+++ + HR ++DFGLS L + H P + A
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKWTA 178
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPF 212
PE L + K+D+W+ GV+L+ + G P+
Sbjct: 179 PESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 124/298 (41%), Gaps = 42/298 (14%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 101
Query: 71 NVVELREVMAT----KKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCH 126
N++ + +++ + K + ++ G +L+ + L D + Q++ + + H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV-L 183
S V HR I DFGL+ A P+ + G L T Y APE+ L
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIML 220
Query: 184 RKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNMY 221
KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 221 NSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 279
Query: 222 RKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 280 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 24/282 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREIS 62
E + V + R+LGKG F +V + TG+ A K + K ++KK E
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL---FAKVARGRLREDLARKYFQQLI 119
++ V VV L TK + + + + GG+L + + E A Y ++
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSA-LPEQLRNDGLLHTQCGTPAYV 178
++ H + +R ISD GL+ +PE G + GT Y+
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG----RVGTVGYM 352
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQD-------ENIMNMYRKVFKAEFVY 231
APEV++ + Y S D W+ G +LY ++AG PFQ E + + ++V + Y
Sbjct: 353 APEVVKNERYTFS-PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE---Y 408
Query: 232 PPWISTDAKRLISKLLVSDPERRI-----TIQSIMRVPWFRK 268
S A+ L S+LL DP R+ + + + P F+K
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 24/282 (8%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREIS 62
E + V + R+LGKG F +V + TG+ A K + K ++KK E
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 63 VMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL---FAKVARGRLREDLARKYFQQLI 119
++ V VV L TK + + + + GG+L + + E A Y ++
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSA-LPEQLRNDGLLHTQCGTPAYV 178
++ H + +R ISD GL+ +PE G + GT Y+
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV----GTVGYM 352
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQD-------ENIMNMYRKVFKAEFVY 231
APEV++ + Y S D W+ G +LY ++AG PFQ E + + ++V + Y
Sbjct: 353 APEVVKNERYTFS-PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE---Y 408
Query: 232 PPWISTDAKRLISKLLVSDPERRI-----TIQSIMRVPWFRK 268
S A+ L S+LL DP R+ + + + P F+K
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 110/261 (42%), Gaps = 25/261 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G G + V +GE VAIK +++ + E ++ RE+ +++ ++H NV+ L +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 78 VMATKKKI------FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVS 131
V + ++ M +++ K+ E+ + Q++ + + HS GV
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTD--LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 132 HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGS 191
HR I DFGL+ D + T Y APEV+ +
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 192 KADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDP 251
D+WS G I+ +L G F+ ++ ++ ++ K V + KL +D
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV-------PGTEFVQKL--NDK 272
Query: 252 ERRITIQSIMRVPWFRKGFTR 272
+ IQS+ + P RK FT+
Sbjct: 273 AAKSYIQSLPQTP--RKDFTQ 291
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 26/219 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVV 73
+ +LG+G A V+ G+ TG+ AIKV N + ++ RE V++ + H N+V
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM--REFEVLKKLNHKNIV 70
Query: 74 EL---REVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF----QQLISAVDFCH 126
+L E T+ K+ + ME+ G L+ + L F + ++ ++
Sbjct: 71 KLFAIEEETTTRHKVLI-MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 127 SRGVSHRXXXXXXXXXXX----XXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE- 181
G+ HR ++DFG + +L +D + GT Y+ P+
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA---RELEDDEQFVSLYGTEEYLHPDM 186
Query: 182 ----VLRK---KGYDGSKADLWSCGVILYVLLAGFLPFQ 213
VLRK K Y G+ DLWS GV Y G LPF+
Sbjct: 187 YERAVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 11 KYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV 63
K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E +V
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 60
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF---QQLIS 120
M+ ++HPN+V+L V + ++ +E++ G L + +E A Q+ S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
A+++ + HR ++DFGLS L + H P + A
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKWTA 178
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPF 212
PE L + K+D+W+ GV+L+ + G P+
Sbjct: 179 PESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 108
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDLA----RKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 223
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 330
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 86
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 201
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 261
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 262 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 308
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 78
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 137 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 193
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 253
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 254 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 300
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 93
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 208
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 268
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 269 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 315
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 86
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 201
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 261
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 262 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 308
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTG-ESVAIKVINKDQLKKEFMMEQIKREISVMRLVR- 68
+YE +G+G + KV+ + L G VA+K + + Q +E M RE++V+R +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLET 70
Query: 69 --HPNVVELREVMATKK-----KIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLI 119
HPNVV L +V + K+ + E+V KV + + + QL+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVA 179
+DF HS V HR ++DFGL+ + L + T Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRA 187
Query: 180 PEVLRKKGYDGSKADLWSCGVILY--------------------VLLAGFLPFQDE--NI 217
PEVL + Y + DLWS G I +L LP +++
Sbjct: 188 PEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 218 MNMYRKVFKAEFVYP-----PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+ + R+ F ++ P I K L+ K L +P +RI+ S + P+F+
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 82
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 197
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 257
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 258 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 304
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 75
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 190
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 250
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 251 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 297
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 189
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 120/287 (41%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 72 VVELREVMAT---KKKIF---VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + KK + + ++YV E +VAR R ++ L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 189
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 189
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 108
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDLA----RKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 223
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 330
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 153
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDLA----RKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 212 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 268
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 328
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 329 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 375
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 14/219 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINK-DQLKKEFMMEQIKREI 61
+ER + G G G+G F VY G + +VA+K + + E + +Q +EI
Sbjct: 19 DERPISVG----GNKXGEGGFGVVYKG--YVNNTTVAVKKLAAMVDITTEELKQQFDQEI 72
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLA----RKYFQQ 117
V +H N+VEL + + + Y G L +++ L+ K Q
Sbjct: 73 KVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQG 132
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
+ ++F H HR ISDFGL+ E+ GT AY
Sbjct: 133 AANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAY 192
Query: 178 VAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN 216
APE LR G K+D++S GV+L ++ G LP DE+
Sbjct: 193 XAPEALR--GEITPKSDIYSFGVVLLEIITG-LPAVDEH 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 102
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDLA----RKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 161 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 217
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 277
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 278 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 324
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 79
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 138 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 194
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 254
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 255 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 301
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 112
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDLA----RKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 171 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 227
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 287
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 288 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 334
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 110
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDLA----RKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 169 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 225
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 285
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 286 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 332
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLXEXVATRWYRAPEIM 203
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 204 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 271 --TRPVA 275
P+A
Sbjct: 323 PSDEPIA 329
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 86
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLXEXVATRWYRAPEIM 204
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 205 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 263
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 264 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 323
Query: 271 --TRPVA 275
P+A
Sbjct: 324 PSDEPIA 330
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 26/219 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVV 73
+ +LG+G A V+ G+ TG+ AIKV N + ++ RE V++ + H N+V
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM--REFEVLKKLNHKNIV 70
Query: 74 EL---REVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF----QQLISAVDFCH 126
+L E T+ K+ + ME+ G L+ + L F + ++ ++
Sbjct: 71 KLFAIEEETTTRHKVLI-MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 127 SRGVSHRXXXXXXXXXXX----XXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPE- 181
G+ HR ++DFG + +L +D GT Y+ P+
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA---RELEDDEQFVXLYGTEEYLHPDM 186
Query: 182 ----VLRK---KGYDGSKADLWSCGVILYVLLAGFLPFQ 213
VLRK K Y G+ DLWS GV Y G LPF+
Sbjct: 187 YERAVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 11 KYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISV 63
K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E +V
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAV 60
Query: 64 MRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF---QQLIS 120
M+ ++HPN+V+L V + ++ E++ G L + +E A Q+ S
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLL-HTQCGTPA-YV 178
A+++ + HR ++DFGLS L + D H P +
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTFTAHAGAKFPIKWT 177
Query: 179 APEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPF 212
APE L + K+D+W+ GV+L+ + G P+
Sbjct: 178 APESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 189
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 77
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYI 137
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 245
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 246 --ISSESARNYIQSLAQMP 262
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 101
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 161
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRWYRAPEIMLN 216
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 269
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 270 --ISSESARNYIQSLAQMP 286
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 121/287 (42%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + +D+ K RE+ +MR + H N
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 87
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 202
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 262
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 263 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 309
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 62
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 122
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-- 176
SA+++ + HR ++DFGLS L G +T PA
Sbjct: 123 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-----MTGDTYT---APAGA 174
Query: 177 -----YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
+ APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 175 KFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 224
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 9 FGKYEMGRL-------LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
+ K+EM R LG G + +VY G +VA+K + +D ++ +E+ +E
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEA 61
Query: 62 SVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFA---KVARGRLREDLARKYFQQL 118
+VM+ ++HPN+V+L V + ++ E++ G L + R + + Q+
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQI 121
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-- 176
SA+++ + HR ++DFGLS L G +T PA
Sbjct: 122 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL-----MTGDTYT---APAGA 173
Query: 177 -----YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMY 221
+ APE L + K+D+W+ GV+L+ + G P+ ++ +Y
Sbjct: 174 KFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 203
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 204 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 271 --TRPVA 275
P+A
Sbjct: 323 PSDEPIA 329
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTG-ESVAIKVINKDQLKKEFMMEQIKREISVMRLVR- 68
+YE +G+G + KV+ + L G VA+K + + Q +E M RE++V+R +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLET 70
Query: 69 --HPNVVELREVMATKK-----KIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLI 119
HPNVV L +V + K+ + E+V KV + + + QL+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVA 179
+DF HS V HR ++DFGL+ + L + T Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRA 187
Query: 180 PEVLRKKGYDGSKADLWSCGVILY--------------------VLLAGFLPFQDE--NI 217
PEVL + Y + DLWS G I +L LP +++
Sbjct: 188 PEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 218 MNMYRKVFKAEFVYP-----PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+ + R+ F ++ P I K L+ K L +P +RI+ S + P+F+
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTG-ESVAIKVINKDQLKKEFMMEQIKREISVMRLVR- 68
+YE +G+G + KV+ + L G VA+K + + Q +E M RE++V+R +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLET 70
Query: 69 --HPNVVELREVMATKK-----KIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLI 119
HPNVV L +V + K+ + E+V KV + + + QL+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 120 SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVA 179
+DF HS V HR ++DFGL+ + L + T Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTLWYRA 187
Query: 180 PEVLRKKGYDGSKADLWSCGVILY--------------------VLLAGFLPFQDE--NI 217
PEVL + Y + DLWS G I +L LP +++
Sbjct: 188 PEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 218 MNMYRKVFKAEFVYP-----PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
+ + R+ F ++ P I K L+ K L +P +RI+ S + P+F+
Sbjct: 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYXQRTLREIKILLRFRHE 85
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 203
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 204 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 271 --TRPVA 275
P+A
Sbjct: 323 PSDEPIA 329
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 125/310 (40%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M++V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + ++V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS GVI+ ++ G + F + ++ + KV
Sbjct: 193 APEVILGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 86
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 204
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 205 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 263
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 264 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 323
Query: 271 --TRPVA 275
P+A
Sbjct: 324 PSDEPIA 330
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 87
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 146
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 205
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 206 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 264
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 265 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 324
Query: 271 --TRPVA 275
P+A
Sbjct: 325 PSDEPIA 331
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 78
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 137
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 196
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 197 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 255
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 256 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 315
Query: 271 --TRPVA 275
P+A
Sbjct: 316 PSDEPIA 322
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 203
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 204 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 271 --TRPVA 275
P+A
Sbjct: 323 PSDEPIA 329
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR-- 68
+YE +G G + VY + +G VA+K + ++ + + RE++++R +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV-REVALLRRLEAF 63
Query: 69 -HPNVVELREVMATKK-----KIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLIS 120
HPNVV L +V AT + K+ + E+V K L + + +Q +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSAL-PEQLRNDGLLHTQCGTPAYVA 179
+DF H+ + HR ++DFGL+ + Q+ D ++ T Y A
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLW----YRA 179
Query: 180 PEVLRKKGYDGSKADLWSCGVI 201
PEVL + Y + D+WS G I
Sbjct: 180 PEVLLQSTY-ATPVDMWSVGCI 200
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 16/218 (7%)
Query: 10 GKYEMGRLLGKG--TFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
G YE+ ++GKG V + TGE V ++ IN + E M+ ++ E+ V +L
Sbjct: 9 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNE-MVTFLQGELHVSKLF 67
Query: 68 RHPNVVELREVMATKKKIFVA---MEYVKGGELFAKVARGRLREDLARKYFQQLISAVDF 124
HPN+V R +++V M Y +L + E Q ++ A+D+
Sbjct: 68 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 127
Query: 125 CHSRGVSHRXXXXXXXXXXXXXXXXISDF--GLSALPEQLRNDGLLHT----QCGTPAYV 178
H G HR +S LS + R ++H ++
Sbjct: 128 IHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR-VVHDFPKYSVKVLPWL 186
Query: 179 APEVLRK--KGYDGSKADLWSCGVILYVLLAGFLPFQD 214
+PEVL++ +GYD +K+D++S G+ L G +PF+D
Sbjct: 187 SPEVLQQNLQGYD-AKSDIYSVGITACELANGHVPFKD 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 87
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 255
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 256 --ISSESARNYIQSLAQMP 272
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 16/218 (7%)
Query: 10 GKYEMGRLLGKG--TFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
G YE+ ++GKG V + TGE V ++ IN + E M+ ++ E+ V +L
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNE-MVTFLQGELHVSKLF 83
Query: 68 RHPNVVELREVMATKKKIFVA---MEYVKGGELFAKVARGRLREDLARKYFQQLISAVDF 124
HPN+V R +++V M Y +L + E Q ++ A+D+
Sbjct: 84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143
Query: 125 CHSRGVSHRXXXXXXXXXXXXXXXXISDF--GLSALPEQLRNDGLLHT----QCGTPAYV 178
H G HR +S LS + R ++H ++
Sbjct: 144 IHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR-VVHDFPKYSVKVLPWL 202
Query: 179 APEVLRK--KGYDGSKADLWSCGVILYVLLAGFLPFQD 214
+PEVL++ +GYD +K+D++S G+ L G +PF+D
Sbjct: 203 SPEVLQQNLQGYD-AKSDIYSVGITACELANGHVPFKD 239
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 79
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 197
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 198 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 256
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 257 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 316
Query: 271 --TRPVA 275
P+A
Sbjct: 317 PSDEPIA 323
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 199
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 200 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL 258
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 271 --TRPVA 275
P+A
Sbjct: 319 PSDEPIA 325
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 101
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 161
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 216
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 269
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 270 --ISSESARNYIQSLAQMP 286
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 125/310 (40%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M++V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + ++V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS GVI+ ++ G + F + ++ + KV
Sbjct: 193 APEVILGMGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 100
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 160
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 215
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 268
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 269 --ISSESARNYIQSLAQMP 285
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLAQMP 266
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K ++K + ++ RE+ +++ ++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELRLLKHMKHE 93
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 153
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 261
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 262 --ISSESARNYIQSLTQMP 278
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHE 83
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 201
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 202 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYD 320
Query: 271 --TRPVA 275
P+A
Sbjct: 321 PSDEPIA 327
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 199
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 200 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL 258
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 271 --TRPVA 275
P+A
Sbjct: 319 PSDEPIA 325
>pdb|2EHB|D Chain D, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 143
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 310 PKFFNAFEFISSMSSGFDLSNLFENKK---KTGSMFTSRYSARHIMEKIEGVAKGMNFKV 366
P NAFE I+ +S G +LS LF+ ++ K + F SR I+ IE VA M FK
Sbjct: 4 PLMMNAFEMIT-LSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFK- 61
Query: 367 AKVKDFKIRLRGDSEGRKGPLSXXXXXXXXXXXXXXXXFSKSSGDTLEYAKFCEEDVRPA 426
+ ++FK RL G S + G L+ K++G+TLEY KF ++ +
Sbjct: 62 SHTRNFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKK-LCSK 120
Query: 427 LKDIVW 432
L++I+W
Sbjct: 121 LENIIW 126
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 77
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 245
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 246 --ISSESARNYIQSLAQMP 262
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 91
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 151
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 152 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 206
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 259
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 260 --ISSESARNYIQSLAQMP 276
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 83
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 201
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 202 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 320
Query: 271 --TRPVA 275
P+A
Sbjct: 321 PSDEPIA 327
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 89
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 148
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 207
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 208 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 266
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 267 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 326
Query: 271 --TRPVA 275
P+A
Sbjct: 327 PSDEPIA 333
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 199
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 200 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 271 --TRPVA 275
P+A
Sbjct: 319 PSDEPIA 325
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 199
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 200 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 271 --TRPVA 275
P+A
Sbjct: 319 PSDEPIA 325
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKCQHLSNDHICYFLYQILRGLKYI 144
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 203
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 204 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 271 --TRPVA 275
P+A
Sbjct: 323 PSDEPIA 329
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 79
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 197
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 198 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINL 256
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 257 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 316
Query: 271 --TRPVA 275
P+A
Sbjct: 317 PSDEPIA 323
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 81
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 199
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 200 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 318
Query: 271 --TRPVA 275
P+A
Sbjct: 319 PSDEPIA 325
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 104
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 164
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWYRAPEIMLN 219
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 272
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 273 --ISSESARNYIQSLTQMP 289
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 86
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 254
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 255 --ISSESARNYIQSLTQMP 271
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 13/209 (6%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLK--KEFMMEQIKREISVMRLVR 68
+YE LG+G FA VY + T + VAIK I K+ + REI +++ +
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGG-ELFAKVARGRLREDLARKYFQQLISAVDFCHS 127
HPN++ L + K I + ++++ E+ K L + Y + +++ H
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLS---ALPEQLRNDGLLHTQCGTPAYVAPEVLR 184
+ HR ++DFGL+ P N H Q T Y APE+L
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP----NRAYXH-QVVTRWYRAPELLF 185
Query: 185 KKGYDGSKADLWSCGVILYVLL--AGFLP 211
G D+W+ G IL LL FLP
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLP 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 124/299 (41%), Gaps = 44/299 (14%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHE 101
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 161 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 219
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 220 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 278
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 279 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 87
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 148 HSADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 255
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 256 --ISSESARNYIQSLTQMP 272
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + + + K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 189
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 83
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 144 HSADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 251
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 252 --ISSESARNYIQSLTQMP 268
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLAQMP 266
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAI+ I+ + + ++ REI ++ RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISP--FEHQTYCQRTLREIKILLRFRHE 85
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 203
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDE--NIMNM 220
L KGY S D+WS G IL +L+ G L P Q++ I+N+
Sbjct: 204 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 221 YRKVFKAEFVYP---PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
+ + + PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322
Query: 271 --TRPVA 275
P+A
Sbjct: 323 PSDEPIA 329
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 26/265 (9%)
Query: 16 RLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
R LG+G F KV Y + TGE VA+K + + + +K+EI ++R + H N
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IADLKKEIEILRNLYHEN 84
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
+V+ + + I + ME++ G L + + + + +L + KY Q+ +D+ S
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY-VAPEVL-RK 185
R HR I DFGL+ E + + +P + APE L +
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
K Y S D+WS GV L+ LL D + M ++ K+ + P RL++
Sbjct: 205 KFYIAS--DVWSFGVTLHELLT--YCDSDSSPMALFLKM-----IGPTHGQMTVTRLVNT 255
Query: 246 L-----LVSDPERRITIQSIMRVPW 265
L L P + +MR W
Sbjct: 256 LKEGKRLPCPPNCPDEVYQLMRKCW 280
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 116/294 (39%), Gaps = 42/294 (14%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V + +G +A+K +++ + ++ RE+ +++ ++H
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 110
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + ++ G +L V +L +D + Q++ + +
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 170
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 171 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 225
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI-----STDAK 240
+ D+WS G I+ LL G F + +N +++ + P + S +A+
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEAR 285
Query: 241 R--------------------------LISKLLVSDPERRITIQSIMRVPWFRK 268
L+ K+LV D ++RIT + P+F +
Sbjct: 286 NYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 83
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 251
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 252 --ISSESARNYIQSLTQMP 268
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 83
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 251
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 252 --ISSESARNYIQSLTQMP 268
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 86
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 254
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 255 --ISSESARNYIQSLTQMP 271
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 80
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 140
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 141 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 195
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 248
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 249 --ISSESARNYIQSLTQMP 265
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 77
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLN 192
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 245
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 246 --ISSESARNYIQSLAQMP 262
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 86
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 254
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 255 --ISSESARNYIQSLTQMP 271
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 100
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 160
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 215
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 268
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 269 --ISSESARNYIQSLTQMP 285
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 83
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 251
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 252 --ISSESARNYIQSLTQMP 268
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 92
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 152
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 153 HSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 207
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 260
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 261 --ISSESARNYIQSLTQMP 277
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 92
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 152
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 153 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 207
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 260
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 261 --ISSESARNYIQSLTQMP 277
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 101
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 161
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 216
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 269
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 270 --ISSESARNYIQSLTQMP 286
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 78
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 138
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 193
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 246
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 247 --ISSESARNYIQSLTQMP 263
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 78
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 138
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 193
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 246
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 247 --ISSESARNYIQSLTQMP 263
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 118
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 176
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 230
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 231 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 350 VDDALQHPYI 359
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 104
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 164
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 219
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 272
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 273 --ISSESARNYIQSLTQMP 289
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 88
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 203
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 256
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 257 --ISSESARNYIQSLTQMP 273
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 87
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 255
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 256 --ISSESARNYIQSLTQMP 272
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 26/265 (9%)
Query: 16 RLLGKGTFAKV----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
R LG+G F KV Y + TGE VA+K + + + +K+EI ++R + H N
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IADLKKEIEILRNLYHEN 72
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLAR--KYFQQLISAVDFCHS 127
+V+ + + I + ME++ G L + + + + +L + KY Q+ +D+ S
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY-VAPEVL-RK 185
R HR I DFGL+ E + + +P + APE L +
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
K Y S D+WS GV L+ LL D + M ++ K+ + P RL++
Sbjct: 193 KFYIAS--DVWSFGVTLHELLT--YCDSDSSPMALFLKM-----IGPTHGQMTVTRLVNT 243
Query: 246 L-----LVSDPERRITIQSIMRVPW 265
L L P + +MR W
Sbjct: 244 LKEGKRLPCPPNCPDEVYQLMRKCW 268
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 93
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 153
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 261
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 262 --ISSESARNYIQSLTQMP 278
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 79
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 139
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 140 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 194
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 247
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 248 --ISSESARNYIQSLTQMP 264
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 93
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 153
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 261
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 262 --ISSESARNYIQSLTQMP 278
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 123/307 (40%), Gaps = 47/307 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y +G+G + V + VAIK I+ + + ++ REI ++ RH
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHE 83
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
N++ + +++ K +++ + ++ +L+ + L D + Q++ + +
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV- 182
HS V HR I DFGL+ A P+ + G L T Y APE+
Sbjct: 143 HSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDH-DHTGFLTEYVATRWYRAPEIM 201
Query: 183 LRKKGYDGSKADLWSCGVILYVLLA------------------GFL--PFQDENIMNMYR 222
L KGY S D+WS G IL +L+ G L P Q++ +
Sbjct: 202 LNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINL 260
Query: 223 KVFKAEFVYP-----PW------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGF- 270
K P PW + A L+ K+L +P +RI ++ + P+ + +
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYD 320
Query: 271 --TRPVA 275
P+A
Sbjct: 321 PSDEPIA 327
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 87
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 255
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 256 --ISSESARNYIQSLTQMP 272
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 16 RLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLVRH 69
R++G G F +V G+ + G+ +VAIK + ++ +++F+ E S+M H
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEA-----SIMGQFDH 103
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHS 127
PNVV L V+ K + + +E+++ G L F + G+ + + + + +
Sbjct: 104 PNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD 163
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKK 186
G HR +SDFGLS + E T P + APE ++ +
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 187 GYDGSKADLWSCGVILY-VLLAGFLPFQD 214
+ S +D+WS G++++ V+ G P+ D
Sbjct: 224 KFT-SASDVWSYGIVMWEVMSYGERPYWD 251
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 123/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ + T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPEVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ G + F + ++ + KV
Sbjct: 193 APEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 86
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 254
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 255 --ISSESARNYIQSLTQMP 271
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 118
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 176
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 230
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 231 APEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 350 VDDALQHPYI 359
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR-- 68
+YE +G G + VY + +G VA+K + ++ + + RE++++R +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV-REVALLRRLEAF 63
Query: 69 -HPNVVELREVMATKK-----KIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLIS 120
HPNVV L +V AT + K+ + E+V K L + + +Q +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
+DF H+ + HR ++DFGL+ + L T Y AP
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPVVVTLWYRAP 180
Query: 181 EVLRKKGYDGSKADLWSCGVI 201
EVL + Y + D+WS G I
Sbjct: 181 EVLLQSTY-ATPVDMWSVGCI 200
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 77
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ D + T Y APE++
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 245
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 246 --ISSESARNYIQSLTQMP 262
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 124/310 (40%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M++V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + ++V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ G + F + ++ + KV
Sbjct: 193 APEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMT--GESVAIKVINKDQLKKEFMMEQIKREISVM-RLVR 68
Y + + +G G +KV+ Q++ + AIK +N ++ + ++ + EI+ + +L +
Sbjct: 58 YSILKQIGSGGSSKVF---QVLNEKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQ 113
Query: 69 HPN-VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK-YFQQLISAVDFCH 126
H + ++ L + T + I++ ME +L + + + + + RK Y++ ++ AV H
Sbjct: 114 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL--- 183
G+ H I DFG++ + + +Q GT Y+ PE +
Sbjct: 173 QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 184 ---RKKGYDGSKA----DLWSCGVILYVLLAGFLPFQDENIMNMYRKVF-----KAEFVY 231
R+ G SK D+WS G ILY + G PFQ I+N K+ E +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEF 289
Query: 232 PPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P D + ++ L DP++RI+I ++ P+ + T PV
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ-THPV 331
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ + T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMEPEVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY DLWS G I+ ++ + F + ++ + KV
Sbjct: 193 APEVILGMGY-KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR-- 68
+YE +G G + VY + +G VA+K + ++ + + RE++++R +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV-REVALLRRLEAF 63
Query: 69 -HPNVVELREVMATKK-----KIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLIS 120
HPNVV L +V AT + K+ + E+V K L + + +Q +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAP 180
+DF H+ + HR ++DFGL+ + L T Y AP
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPVVVTLWYRAP 180
Query: 181 EVLRKKGYDGSKADLWSCGVI 201
EVL + Y + D+WS G I
Sbjct: 181 EVLLQSTY-ATPVDMWSVGCI 200
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 79
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 80 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 137
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 191
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 192 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 250
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 251 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 310
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 311 VDDALQHPYI 320
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMT--GESVAIKVINKDQLKKEFMMEQIKREISVM-RLVR 68
Y + + +G G +KV+ Q++ + AIK +N ++ + ++ + EI+ + +L +
Sbjct: 11 YSILKQIGSGGSSKVF---QVLNEKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQ 66
Query: 69 HPN-VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK-YFQQLISAVDFCH 126
H + ++ L + T + I++ ME +L + + + + + RK Y++ ++ AV H
Sbjct: 67 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL--- 183
G+ H I DFG++ + + +Q GT Y+ PE +
Sbjct: 126 QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 184 ---RKKGYDGSKA----DLWSCGVILYVLLAGFLPFQDENIMNMYRKVF-----KAEFVY 231
R+ G SK D+WS G ILY + G PFQ I+N K+ E +
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEF 242
Query: 232 PPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P D + ++ L DP++RI+I ++ P+ + T PV
Sbjct: 243 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ-THPV 284
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 193 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDDALQHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 193 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDDALQHPYI 321
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMT--GESVAIKVINKDQLKKEFMMEQIKREISVM-RLVR 68
Y + + +G G +KV+ Q++ + AIK +N ++ + ++ + EI+ + +L +
Sbjct: 58 YSILKQIGSGGSSKVF---QVLNEKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQ 113
Query: 69 HPN-VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK-YFQQLISAVDFCH 126
H + ++ L + T + I++ ME +L + + + + + RK Y++ ++ AV H
Sbjct: 114 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL--- 183
G+ H I DFG++ + + +Q GT Y+ PE +
Sbjct: 173 QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 184 ---RKKGYDGSKA----DLWSCGVILYVLLAGFLPFQDENIMNMYRKVF-----KAEFVY 231
R+ G SK D+WS G ILY + G PFQ I+N K+ E +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEF 289
Query: 232 PPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P D + ++ L DP++RI+I ++ P+ + T PV
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ-THPV 331
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 81
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 139
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 193
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 194 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 312
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 313 VDDALQHPYI 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 74
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 132
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 186
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 187 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 306 VDDALQHPYI 315
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 39/229 (17%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E + LG+G F V+ K + + AIK I +E E++ RE+ + + HP
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPG 64
Query: 72 VV------------ELREVMATKKKIFVAMEYVKGGELFAKVARGRL----RE-DLARKY 114
+V E + + K +++ M+ + L GR RE +
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENL-KDWMNGRCTIEERERSVCLHI 123
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFG--------------LSALPE 160
F Q+ AV+F HS+G+ HR + DFG L+ +P
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 161 QLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGF 209
R+ G Q GT Y++PE + Y K D++S G+IL+ LL F
Sbjct: 184 YARHTG----QVGTKLYMSPEQIHGNSY-SHKVDIFSLGLILFELLYPF 227
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 73
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 131
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 185
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 186 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 305 VDDALQHPYI 314
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 81
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 139
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 193
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 194 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 312
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 313 VDDALQHPYI 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 120/310 (38%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 74
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 132
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 186
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 187 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 305
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 306 VDDALQHPYI 315
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 121/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKXV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 193 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDDALQHPYI 321
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 28/252 (11%)
Query: 18 LGKGTFAKVYYGKQLMTGE-SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V YGK G+ VAIK+I + + ++ +E+ K VM + H +V+L
Sbjct: 32 LGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQLY 85
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
V ++ IF+ EY+ G L + + R R + + + + A+++ S+ HR
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 145
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
+SDFGLS L ++ P + PEVL + SK+
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRY--VLDDEETSSVGSKFPVRWSPPEVLMYSKF-SSKS 202
Query: 194 DLWSCGVILYVLLA-GFLPFQ-------DENI---MNMYRKVFKAE----FVYPPWISTD 238
D+W+ GV+++ + + G +P++ E+I + +YR +E +Y W
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKA 262
Query: 239 AKRLISKLLVSD 250
+R K+L+S+
Sbjct: 263 DERPTFKILLSN 274
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 124/310 (40%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M++V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKVV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + ++V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLVG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ G + F + ++ + KV
Sbjct: 193 APEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + + + K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV E +VAR R ++ L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSR-YYR 189
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 32/254 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGE-SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V YGK G+ VAIK+I + + ++ +E+ K VM + H +V+L
Sbjct: 16 LGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQLY 69
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
V ++ IF+ EY+ G L + + R R + + + + A+++ S+ HR
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 129
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGS 191
+SDFGLS + D + G+ P + PEVL + S
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLS----RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF-SS 184
Query: 192 KADLWSCGVILYVLLA-GFLPFQ-------DENI---MNMYRKVFKAE----FVYPPWIS 236
K+D+W+ GV+++ + + G +P++ E+I + +YR +E +Y W
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 244
Query: 237 TDAKRLISKLLVSD 250
+R K+L+S+
Sbjct: 245 KADERPTFKILLSN 258
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 123/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + ++V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ G + F + ++ + KV
Sbjct: 193 APEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 121/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKXV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 193 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDDALQHPYI 321
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 54/287 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y +++G G+F VY K +GE VAIK + + + K RE+ +MR + H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLDHCN 74
Query: 72 VVELREVMAT----KKKIF--VAMEYVKGGELFAKVAR--GRLREDL----ARKYFQQLI 119
+V LR + K +++ + ++YV +VAR R ++ L + Y QL
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPAT--VYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 120 SAVDFCHSRGVSHR-XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
++ + HS G+ HR + DFG + + +R + + C Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSXICSR-YYR 189
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APE++ S D+WS G +L LL G F ++ ++ ++ K
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 227 -----AEFVYP-----PW-------ISTDAKRLISKLLVSDPERRIT 256
EF +P PW +A L S+LL P R+T
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 122/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ + T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMEPEVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ + F + ++ + KV
Sbjct: 193 APEVILGMGY-KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 32/254 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGE-SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V YGK G+ VAIK+I + + ++ +E+ K VM + H +V+L
Sbjct: 32 LGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQLY 85
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
V ++ IF+ EY+ G L + + R R + + + + A+++ S+ HR
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 145
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGS 191
+SDFGLS + D + G+ P + PEVL + S
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLS----RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF-SS 200
Query: 192 KADLWSCGVILYVLLA-GFLPFQ-------DENI---MNMYRKVFKAE----FVYPPWIS 236
K+D+W+ GV+++ + + G +P++ E+I + +YR +E +Y W
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 260
Query: 237 TDAKRLISKLLVSD 250
+R K+L+S+
Sbjct: 261 KADERPTFKILLSN 274
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMT--GESVAIKVINKDQLKKEFMMEQIKREISVM-RLVR 68
Y + + +G G +KV+ Q++ + AIK +N ++ + ++ + EI+ + +L +
Sbjct: 30 YSILKQIGSGGSSKVF---QVLNEKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQ 85
Query: 69 HPN-VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK-YFQQLISAVDFCH 126
H + ++ L + T + I++ ME +L + + + + + RK Y++ ++ AV H
Sbjct: 86 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL--- 183
G+ H I DFG++ + + +Q GT Y+ PE +
Sbjct: 145 QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 184 ---RKKGYDGSKA----DLWSCGVILYVLLAGFLPFQDENIMNMYRKVF-----KAEFVY 231
R+ G SK D+WS G ILY + G PFQ I+N K+ E +
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEF 261
Query: 232 PPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P D + ++ L DP++RI+I ++ P+ + T PV
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ-THPV 303
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 123/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + ++V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ G + F + ++ + KV
Sbjct: 193 APEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ G + F + ++ + KV
Sbjct: 193 APEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 28/252 (11%)
Query: 18 LGKGTFAKVYYGKQLMTGE-SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V YGK G+ VAIK+I + + ++ +E+ K VM + H +V+L
Sbjct: 17 LGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQLY 70
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
V ++ IF+ EY+ G L + + R R + + + + A+++ S+ HR
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 130
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
+SDFGLS L ++ P + PEVL + SK+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVGSKFPVRWSPPEVLMYSKF-SSKS 187
Query: 194 DLWSCGVILYVLLA-GFLPFQ-------DENI---MNMYRKVFKAE----FVYPPWISTD 238
D+W+ GV+++ + + G +P++ E+I + +YR +E +Y W
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKA 247
Query: 239 AKRLISKLLVSD 250
+R K+L+S+
Sbjct: 248 DERPTFKILLSN 259
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 121/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 193 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDDALQHPYI 321
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I D+GL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 81
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 139
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 193
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ G + F + ++ + KV
Sbjct: 194 APEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 312
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 313 VDEALQHPYI 322
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 121/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 73
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXG 131
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 185
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 186 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 305 VDDALQHPYI 314
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ G + F + ++ + KV
Sbjct: 193 APEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDEALQHPYI 321
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 32/254 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGE-SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V YGK G+ VAIK+I + + ++ +E+ K VM + H +V+L
Sbjct: 23 LGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQLY 76
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
V ++ IF+ EY+ G L + + R R + + + + A+++ S+ HR
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 136
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGS 191
+SDFGLS + D + G+ P + PEVL + S
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLS----RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF-SS 191
Query: 192 KADLWSCGVILYVLLA-GFLPFQ-------DENI---MNMYRKVFKAE----FVYPPWIS 236
K+D+W+ GV+++ + + G +P++ E+I + +YR +E +Y W
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 251
Query: 237 TDAKRLISKLLVSD 250
+R K+L+S+
Sbjct: 252 KADERPTFKILLSN 265
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 121/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKXV 80
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSYLLYQMLXG 138
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 192
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFK------------ 226
APEV+ GY D+WS G I+ ++ + F + ++ + KV +
Sbjct: 193 APEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 227 ---------------AEFVYPPWI---------------STDAKRLISKLLVSDPERRIT 256
A +P ++ A+ L+SK+LV DP +RI+
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 312 VDDALQHPYI 321
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 32/254 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGE-SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V YGK G+ VAIK+I + + ++ +E+ K VM + H +V+L
Sbjct: 12 LGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQLY 65
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
V ++ IF+ EY+ G L + + R R + + + + A+++ S+ HR
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 125
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGS 191
+SDFGLS + D + G+ P + PEVL + S
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLS----RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF-SS 180
Query: 192 KADLWSCGVILYVLLA-GFLPFQ-------DENI---MNMYRKVFKAE----FVYPPWIS 236
K+D+W+ GV+++ + + G +P++ E+I + +YR +E +Y W
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 240
Query: 237 TDAKRLISKLLVSD 250
+R K+L+S+
Sbjct: 241 KADERPTFKILLSN 254
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 16/203 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIK--REISVMRLVR 68
+YE +G G + VY + +G VA+K + I RE++++R +
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 69 ---HPNVVELREVMATKK-----KIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQL 118
HPNVV L +V AT + K+ + E+V K L + + +Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 119 ISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
+ +DF H+ + HR ++DFGL+ + L T Y
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALTPVVVTLWYR 186
Query: 179 APEVLRKKGYDGSKADLWSCGVI 201
APEVL + Y + D+WS G I
Sbjct: 187 APEVLLQSTY-ATPVDMWSVGCI 208
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMT--GESVAIKVINKDQLKKEFMMEQIKREISVM-RLVR 68
Y + + +G G +KV+ Q++ + AIK +N ++ + ++ + EI+ + +L +
Sbjct: 14 YSILKQIGSGGSSKVF---QVLNEKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQ 69
Query: 69 HPN-VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK-YFQQLISAVDFCH 126
H + ++ L + T + I++ ME +L + + + + + RK Y++ ++ AV H
Sbjct: 70 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 128
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL--- 183
G+ H I DFG++ + + +Q GT Y+ PE +
Sbjct: 129 QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 184 ---RKKGYDGSKA----DLWSCGVILYVLLAGFLPFQDENIMNMYRKVF-----KAEFVY 231
R+ G SK D+WS G ILY + G PFQ I+N K+ E +
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEF 245
Query: 232 PPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P D + ++ L DP++RI+I ++ P+ + T PV
Sbjct: 246 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ-THPV 287
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMT--GESVAIKVINKDQLKKEFMMEQIKREISVM-RLVR 68
Y + + +G G +KV+ Q++ + AIK +N ++ + ++ + EI+ + +L +
Sbjct: 30 YSILKQIGSGGSSKVF---QVLNEKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQ 85
Query: 69 HPN-VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK-YFQQLISAVDFCH 126
H + ++ L + T + I++ ME +L + + + + + RK Y++ ++ AV H
Sbjct: 86 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL--- 183
G+ H I DFG++ + + +Q GT Y+ PE +
Sbjct: 145 QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 184 ---RKKGYDGSKA----DLWSCGVILYVLLAGFLPFQDENIMNMYRKVF-----KAEFVY 231
R+ G SK D+WS G ILY + G PFQ I+N K+ E +
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEF 261
Query: 232 PPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P D + ++ L DP++RI+I ++ P+ + T PV
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ-THPV 303
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 28/252 (11%)
Query: 18 LGKGTFAKVYYGKQLMTGE-SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V YGK G+ VAIK+I + + ++ +E+ K VM + H +V+L
Sbjct: 17 LGTGQFGVVKYGK--WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQLY 70
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
V ++ IF+ EY+ G L + + R R + + + + A+++ S+ HR
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRD 130
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
+SDFGLS L ++ P + PEVL + SK+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSRGSKFPVRWSPPEVLMYSKF-SSKS 187
Query: 194 DLWSCGVILYVLLA-GFLPFQ-------DENI---MNMYRKVFKAE----FVYPPWISTD 238
D+W+ GV+++ + + G +P++ E+I + +YR +E +Y W
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKA 247
Query: 239 AKRLISKLLVSD 250
+R K+L+S+
Sbjct: 248 DERPTFKILLSN 259
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMT--GESVAIKVINKDQLKKEFMMEQIKREISVM-RLVR 68
Y + + +G G +KV+ Q++ + AIK +N ++ + ++ + EI+ + +L +
Sbjct: 10 YSILKQIGSGGSSKVF---QVLNEKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQ 65
Query: 69 HPN-VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK-YFQQLISAVDFCH 126
H + ++ L + T + I++ ME +L + + + + + RK Y++ ++ AV H
Sbjct: 66 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 124
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL--- 183
G+ H I DFG++ + + +Q GT Y+ PE +
Sbjct: 125 QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 184 ---RKKGYDGSKA----DLWSCGVILYVLLAGFLPFQDENIMNMYRKVF-----KAEFVY 231
R+ G SK D+WS G ILY + G PFQ I+N K+ E +
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEF 241
Query: 232 PPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P D + ++ L DP++RI+I ++ P+ + T PV
Sbjct: 242 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ-THPV 283
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G G F V+ G L + VAIK I + + +E +E E VM + HP +V+L
Sbjct: 15 IGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 69
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V + I + E+++ G L + + RG + + + + V HR
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGSK 192
+SDFG++ + D + GT P + +PEV Y SK
Sbjct: 130 AARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SK 184
Query: 193 ADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI-STDAKRLISKLLVSD 250
+D+WS GV+++ V G +P+++ + + + +Y P + ST ++++
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKER 244
Query: 251 PERRITIQSIMR 262
PE R ++R
Sbjct: 245 PEDRPAFSRLLR 256
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G G F V+ G L + VAIK I + + +E +E E VM + HP +V+L
Sbjct: 18 IGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 72
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V + I + E+++ G L + + RG + + + + V HR
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 132
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGSK 192
+SDFG++ + D + GT P + +PEV Y SK
Sbjct: 133 AARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SK 187
Query: 193 ADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI-STDAKRLISKLLVSD 250
+D+WS GV+++ V G +P+++ + + + +Y P + ST ++++
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRER 247
Query: 251 PERRITIQSIMR 262
PE R ++R
Sbjct: 248 PEDRPAFSRLLR 259
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 40/273 (14%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME--QIKREISVMRL 66
+ + E+ ++G+G F V K + VAIK I + +K F++E Q+ R
Sbjct: 8 YKEIEVEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESERKAFIVELRQLSR------- 58
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDL-------ARKYFQQLI 119
V HPN+V+L A + + MEY +GG L+ V G E L A + Q
Sbjct: 59 VNHPNIVKLYG--ACLNPVCLVMEYAEGGSLY-NVLHGA--EPLPYYTAAHAMSWCLQCS 113
Query: 120 SAVDFCHS---RGVSHRXXXXXXXXXXXX-XXXXISDFGLSA-LPEQLRNDGLLHTQCGT 174
V + HS + + HR I DFG + + + N+ G+
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK------GS 167
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE-FVYPP 233
A++APEV Y K D++S G+IL+ ++ PF DE +R ++ PP
Sbjct: 168 AAWMAPEVFEGSNYS-EKCDVFSWGIILWEVITRRKPF-DEIGGPAFRIMWAVHNGTRPP 225
Query: 234 WISTDAK---RLISKLLVSDPERRITIQSIMRV 263
I K L+++ DP +R +++ I+++
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 258
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 16/228 (7%)
Query: 16 RLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLVRH 69
+++G G F +V G+ + G+ VAIK + D+ +++F+ E S+M H
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL-----SEASIMGQFDH 89
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHS 127
PN++ L V+ K + + EY++ G L F + GR + + S + +
Sbjct: 90 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 149
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKK 186
HR +SDFG+S + E P + APE + +
Sbjct: 150 MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 187 GYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
+ S +D+WS G++++ V+ G P+ D + ++ + + + + PP
Sbjct: 210 KFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 40/273 (14%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMME--QIKREISVMRL 66
+ + E+ ++G+G F V K + VAIK I + +K F++E Q+ R
Sbjct: 7 YKEIEVEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESERKAFIVELRQLSR------- 57
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDL-------ARKYFQQLI 119
V HPN+V+L A + + MEY +GG L+ V G E L A + Q
Sbjct: 58 VNHPNIVKLYG--ACLNPVCLVMEYAEGGSLY-NVLHGA--EPLPYYTAAHAMSWCLQCS 112
Query: 120 SAVDFCHS---RGVSHRXXXXXXXXXXXX-XXXXISDFGLSA-LPEQLRNDGLLHTQCGT 174
V + HS + + HR I DFG + + + N+ G+
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK------GS 166
Query: 175 PAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAE-FVYPP 233
A++APEV Y K D++S G+IL+ ++ PF DE +R ++ PP
Sbjct: 167 AAWMAPEVFEGSNYS-EKCDVFSWGIILWEVITRRKPF-DEIGGPAFRIMWAVHNGTRPP 224
Query: 234 WISTDAK---RLISKLLVSDPERRITIQSIMRV 263
I K L+++ DP +R +++ I+++
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 257
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 121/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 74
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 132
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 186
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY DLWS G I+ ++ + F + ++ + KV
Sbjct: 187 APEVILGMGY-KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 246 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 305
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 306 VDEALQHPYI 315
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 121/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 85
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 86 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 143
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYR 197
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY DLWS G I+ ++ + F + ++ + KV
Sbjct: 198 APEVILGMGYK-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 256
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 257 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 316
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 317 VDEALQHPYI 326
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DF L+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G G F V+ G L + VAIK I + + +E +E E VM + HP +V+L
Sbjct: 15 IGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 69
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V + I + E+++ G L + + RG + + + + V HR
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 129
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGSK 192
+SDFG++ + D + GT P + +PEV Y SK
Sbjct: 130 AARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SK 184
Query: 193 ADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI-STDAKRLISKLLVSD 250
+D+WS GV+++ V G +P+++ + + + +Y P + ST ++++
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKER 244
Query: 251 PERRITIQSIMR 262
PE R ++R
Sbjct: 245 PEDRPAFSRLLR 256
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 29/283 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMT--GESVAIKVINKDQLKKEFMMEQIKREISVM-RLVR 68
Y + + +G G +KV+ Q++ + AIK +N ++ + ++ + EI+ + +L +
Sbjct: 58 YSILKQIGSGGSSKVF---QVLNEKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKLQQ 113
Query: 69 HPN-VVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK-YFQQLISAVDFCH 126
H + ++ L + T + I++ ME +L + + + + + RK Y++ ++ AV H
Sbjct: 114 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 172
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL--- 183
G+ H I DFG++ + + +Q G Y+ PE +
Sbjct: 173 QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 184 ---RKKGYDGSKA----DLWSCGVILYVLLAGFLPFQDENIMNMYRKVF-----KAEFVY 231
R+ G SK D+WS G ILY + G PFQ I+N K+ E +
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEF 289
Query: 232 PPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPV 274
P D + ++ L DP++RI+I ++ P+ + T PV
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ-THPV 331
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH-P 70
Y++ R LG+G +++V+ + E V +K++ K +IKREI ++ +R P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKIL------KPVKKNKIKREIKILENLRGGP 92
Query: 71 NVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSR 128
N++ L +++ + + E+V + F ++ + D+ R Y +++ A+D+CHS
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTLTDYDI-RFYMYEILKALDYCHSM 150
Query: 129 GVSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK 185
G+ HR + D+GL+ P Q N + + + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN-----VRVASRYFKGPELLVD 205
Query: 186 -KGYDGSKADLWSCGVILYVLLAGFLPF 212
+ YD S D+WS G +L ++ PF
Sbjct: 206 YQMYDYS-LDMWSLGCMLASMIFRKEPF 232
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G G F V+ G L + VAIK I + + +E +E E VM + HP +V+L
Sbjct: 13 IGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 67
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V + I + E+++ G L + + RG + + + + V HR
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 127
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGSK 192
+SDFG++ + D + GT P + +PEV Y SK
Sbjct: 128 AARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRY-SSK 182
Query: 193 ADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI-STDAKRLISKLLVSD 250
+D+WS GV+++ V G +P+++ + + + +Y P + ST ++++
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKER 242
Query: 251 PERRITIQSIMR 262
PE R ++R
Sbjct: 243 PEDRPAFSRLLR 254
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 16/228 (7%)
Query: 16 RLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLVRH 69
+++G G F +V G+ + G+ VAIK + D+ +++F+ E S+M H
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL-----SEASIMGQFDH 74
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHS 127
PN++ L V+ K + + EY++ G L F + GR + + S + +
Sbjct: 75 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 134
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKK 186
HR +SDFG+S + E P + APE + +
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 187 GYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
+ S +D+WS G++++ V+ G P+ D + ++ + + + + PP
Sbjct: 195 KFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP 241
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 16/228 (7%)
Query: 16 RLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLVRH 69
+++G G F +V G+ + G+ VAIK + D+ +++F+ E S+M H
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL-----SEASIMGQFDH 68
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHS 127
PN++ L V+ K + + EY++ G L F + GR + + S + +
Sbjct: 69 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD 128
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKK 186
HR +SDFG+S + E P + APE + +
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 187 GYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
+ S +D+WS G++++ V+ G P+ D + ++ + + + + PP
Sbjct: 189 KFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPP 235
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G G F V+ G L + VAIK I + + +E +E E VM + HP +V+L
Sbjct: 16 IGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 70
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V + I + E+++ G L + + RG + + + + V HR
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 130
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGSK 192
+SDFG++ + D + GT P + +PEV Y SK
Sbjct: 131 AARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SK 185
Query: 193 ADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI-STDAKRLISKLLVSD 250
+D+WS GV+++ V G +P+++ + + + +Y P + ST ++++
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRER 245
Query: 251 PERRITIQSIMR 262
PE R ++R
Sbjct: 246 PEDRPAFSRLLR 257
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 61/310 (19%)
Query: 8 LFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLV 67
+ +Y+ + +G G V + +VAIK +++ + + ++ RE+ +M+ V
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 82
Query: 68 RHPNVVELREVMATKKK------IFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISA 121
H N++ L V +K +++ ME + +V + L + Q++
Sbjct: 83 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLCG 140
Query: 122 VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG---LLHTQCGTPAYV 178
+ HS G+ HR I DFGL+ R G ++ T Y
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMVPFVVTRYYR 194
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKV-------------- 224
APEV+ GY D+WS G I+ ++ G + F + ++ + KV
Sbjct: 195 APEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 253
Query: 225 -----------------FKAEFVYPPWI-----------STDAKRLISKLLVSDPERRIT 256
+ E ++P + ++ A+ L+SK+LV D +RI+
Sbjct: 254 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 313
Query: 257 IQSIMRVPWF 266
+ ++ P+
Sbjct: 314 VDEALQHPYI 323
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I FGL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 20/254 (7%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R +G G + V + VA+K +++ + + RE+ +++ ++H NV+ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 76 REVM--ATKKKIFVAMEYVK---GGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
+V AT + F + V G +L V L ++ + QL+ + + HS G+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I DFGL+ + D + T Y APE++ +
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
D+WS G I+ LL G F + ++ +++ + + T + +++K +S
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV-------VGTPSPEVLAK--ISS 258
Query: 251 PERRITIQSIMRVP 264
R IQS+ +P
Sbjct: 259 EHARTYIQSLPPMP 272
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 88
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ + T Y APE++
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLN 203
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 256
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 257 --ISSESARNYIQSLTQMP 273
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I D GL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 88
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ + T Y APE++
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLN 203
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 256
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 257 --ISSESARNYIQSLTQMP 273
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 88
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I DFGL+ + T Y APE++
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLN 203
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 256
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 257 --ISSESARNYIQSLTQMP 273
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 30/255 (11%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVI----NKDQLKKEFMMEQIKREISVMRLVRHPNVV 73
+G GT +V+ + TG +A+K + NK++ K+ M + V++ P +V
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV-----VLKSHDCPYIV 87
Query: 74 ELREVMATKKKIFVAMEYV-KGGELFAKVARGRLREDLARKYFQQLISAVDFCHSR-GVS 131
+ T +F+AME + E K +G + E + K ++ A+ + + GV
Sbjct: 88 QCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVI 147
Query: 132 HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVL-----RKK 186
HR + DFG+S +L +D G AY+APE + K
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISG---RLVDDKAKDRSAGCAAYMAPERIDPPDPTKP 204
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQD-ENIMNMYRKVFKAEFVYPPWI------STDA 239
YD +AD+WS G+ L L G P+++ + + KV + E PP + S D
Sbjct: 205 DYD-IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE---PPLLPGHMGFSGDF 260
Query: 240 KRLISKLLVSDPERR 254
+ + L D +R
Sbjct: 261 QSFVKDCLTKDHRKR 275
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 5 RHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIK 58
R + + + +++G G +V YG+ + G+ VAIK + ++ +++F+ E
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA-- 101
Query: 59 REISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQ 116
S+M HPN++ L V+ + + EY++ G L F + G+ +
Sbjct: 102 ---SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR 158
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA 176
+ + + + G HR +SDFGLS + E + T P
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPI 218
Query: 177 -YVAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
+ APE + + + S +D+WS GV+++ +LA
Sbjct: 219 RWTAPEAIAFRTFS-SASDVWSFGVVMWEVLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 5 RHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIK 58
R + + + +++G G +V YG+ + G+ VAIK + ++ +++F+ E
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA-- 101
Query: 59 REISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQ 116
S+M HPN++ L V+ + + EY++ G L F + G+ +
Sbjct: 102 ---SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR 158
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA 176
+ + + + G HR +SDFGLS + E + T P
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI 218
Query: 177 -YVAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
+ APE + + + S +D+WS GV+++ +LA
Sbjct: 219 RWTAPEAIAFRTFS-SASDVWSFGVVMWEVLA 249
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 17/252 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G G F V+ G L + VAIK I + + ++ +E E VM + HP +V+L
Sbjct: 35 IGSGQFGLVHLGYWL-NKDKVAIKTIKEGSMSEDDFIE----EAEVMMKLSHPKLVQLYG 89
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXX 135
V + I + E+++ G L + + RG + + + + V HR
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 149
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGSK 192
+SDFG++ + D + GT P + +PEV Y SK
Sbjct: 150 AARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SK 204
Query: 193 ADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI-STDAKRLISKLLVSD 250
+D+WS GV+++ V G +P+++ + + + +Y P + ST ++++
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKER 264
Query: 251 PERRITIQSIMR 262
PE R ++R
Sbjct: 265 PEDRPAFSRLLR 276
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I D GL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 20/254 (7%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R +G G + V + VA+K +++ + + RE+ +++ ++H NV+ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 76 REVM--ATKKKIFVAMEYVK---GGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
+V AT + F + V G +L V L ++ + QL+ + + HS G+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I DFGL+ + D + T Y APE++ +
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
D+WS G I+ LL G F + ++ +++ + + T + +++K +S
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV-------VGTPSPEVLAK--ISS 258
Query: 251 PERRITIQSIMRVP 264
R IQS+ +P
Sbjct: 259 EHARTYIQSLPPMP 272
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 33/226 (14%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMR---LV 67
++++ R+ G+GTF V GK+ TG SVAIK + +D + RE+ +M+ ++
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-------NRELQIMQDLAVL 76
Query: 68 RHPNVVELREVMAT-----KKKIF--VAMEYVKGGELFAKVARGRLREDLA------RKY 114
HPN+V+L+ T ++ I+ V MEYV + + R R +A + +
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIKVF 134
Query: 115 FQQLISAVDFCH--SRGVSHRXXXXXXXXXXXXX-XXXISDFGLS-ALPEQLRNDGLLHT 170
QLI ++ H S V HR + DFG + L N + +
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICS 194
Query: 171 QCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDEN 216
+ Y APE++ + + D+WS G I ++ G F+ +N
Sbjct: 195 R----YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN 236
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 20/259 (7%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+Y+ +G G + V TG VA+K +++ + ++ RE+ +++ ++H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMKHE 81
Query: 71 NVVELREVMATKKKI-----FVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFC 125
NV+ L +V + + + ++ G +L V +L +D + Q++ + +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRK 185
HS + HR I D GL+ D + T Y APE++
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISK 245
+ D+WS G I+ LL G F + ++ + + + + T L+ K
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-------VGTPGAELLKK 249
Query: 246 LLVSDPERRITIQSIMRVP 264
+S R IQS+ ++P
Sbjct: 250 --ISSESARNYIQSLTQMP 266
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 113/258 (43%), Gaps = 23/258 (8%)
Query: 1 MEEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMM 54
ME + + ++ ++G G F +V G+ G+ VAIK + ++ ++EF+
Sbjct: 5 MEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL- 63
Query: 55 EQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLAR 112
E S+M HPN++ L V+ + + E+++ G L F ++ G+
Sbjct: 64 ----SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 119
Query: 113 KYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC 172
+ + S + + HR +SDFGLS E+ +D +
Sbjct: 120 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSL 179
Query: 173 G--TPA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQD---ENIMNMYRKVF 225
G P + APE + + + S +D WS G++++ +++ G P+ D ++++N + +
Sbjct: 180 GGKIPIRWTAPEAIAFRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDY 238
Query: 226 KAEFVYPPWISTDAKRLI 243
+ PP T +L+
Sbjct: 239 R--LPPPPDCPTSLHQLM 254
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 20/254 (7%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
R +G G + V + VA+K +++ + + RE+ +++ ++H NV+ L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 76 REVM--ATKKKIFVAMEYVK---GGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
+V AT + F + V G +L V L ++ + QL+ + + HS G+
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 144
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I DFGL+ + D + T Y APE++ +
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 191 SKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSD 250
D+WS G I+ LL G F + ++ +++ + + T + +++K +S
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV-------VGTPSPEVLAK--ISS 250
Query: 251 PERRITIQSIMRVP 264
R IQS+ +P
Sbjct: 251 EHARTYIQSLPPMP 264
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 103
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 16 RLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLVRH 69
R++G G F +V G+ + G+ VAIK + ++ +++F+ E S+M H
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEA-----SIMGQFDH 82
Query: 70 PNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHS 127
PN++ L V+ K + + EY++ G L F K G+ + + + + +
Sbjct: 83 PNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD 142
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKK 186
G HR +SDFGLS + E P + APE + +
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 187 GYDGSKADLWSCGVILYVLLA 207
+ S +D+WS G++++ +++
Sbjct: 203 KFT-SASDVWSYGIVMWEVVS 222
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 103
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 103
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 103
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 116/268 (43%), Gaps = 19/268 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V+ +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + + GR+ E + K +I + + + + HR
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 136 XXXXXXXXXXXXXXISDFGLSA-LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKAD 194
+ DFG+S L +++ N+ + GT +Y++PE L+ Y ++D
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV-----GTRSYMSPERLQGTHYS-VQSD 188
Query: 195 LWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWI-----STDAKRLISKLLVS 249
+WS G+ L + G P I + + PP + S + + ++K L+
Sbjct: 189 IWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEP---PPKLPSAVFSLEFQDFVNKCLIK 245
Query: 250 DPERRITIQSIMRVPWFRKGFTRPVAFS 277
+P R ++ +M + ++ V F+
Sbjct: 246 NPAERADLKQLMVHAFIKRSDAEEVDFA 273
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 103
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 101
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 156
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 216
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 217 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 270
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 91
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 146
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 147 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 206
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 207 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 260
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 74
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 190 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 243
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESV-AIKVINKDQLKKEFMMEQIKREI 61
EERH+ + LGKG F V + G++ A+ + + Q +REI
Sbjct: 5 EERHLKYISQ-----LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREI 59
Query: 62 SVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLARK--YFQQ 117
+++ + +V+ R V + ++ + MEY+ G L + R R R D +R Y Q
Sbjct: 60 QILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 119
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
+ +++ SR HR I+DFGL+ L ++ ++ +P +
Sbjct: 120 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 178 -VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
APE L + ++D+WS GV+LY L
Sbjct: 180 WYAPESLSDNIF-SRQSDVWSFGVVLYELFT 209
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 107/242 (44%), Gaps = 23/242 (9%)
Query: 17 LLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLVRHP 70
++G G F +V G+ G+ VAIK + ++ ++EF+ E S+M HP
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL-----SEASIMGQFEHP 77
Query: 71 NVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSR 128
N++ L V+ + + E+++ G L F ++ G+ + + S + +
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEM 137
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG--TPA-YVAPEVLRK 185
HR +SDFGLS E+ +D + G P + APE +
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 186 KGYDGSKADLWSCGVILYVLLA-GFLPFQD---ENIMNMYRKVFKAEFVYPPWISTDAKR 241
+ + S +D WS G++++ +++ G P+ D ++++N + ++ PP T +
Sbjct: 198 RKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR--LPPPPDCPTSLHQ 254
Query: 242 LI 243
L+
Sbjct: 255 LM 256
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G+F +V+ + TG A+K + + + E +M + P +V L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM--------ACAGLTSPRIVPLYG 152
Query: 78 VMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAVDFCHSRGVSH-RXX 135
+ + + ME ++GG L V +G L ED A Y Q + +++ HSR + H
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC------GTPAYVAPEVLRKKGYD 189
+ DFG + L+ DGL + GT ++APEV+ + D
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVC---LQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 190 GSKADLWSCGVILYVLLAGFLPF 212
+K D+WS ++ +L G P+
Sbjct: 270 -AKVDVWSSCCMMLHMLNGCHPW 291
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G+F +V+ + TG A+K + + + E +M + P +V L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM--------ACAGLTSPRIVPLYG 133
Query: 78 VMATKKKIFVAMEYVKGGELFAKV-ARGRLREDLARKYFQQLISAVDFCHSRGVSH-RXX 135
+ + + ME ++GG L V +G L ED A Y Q + +++ HSR + H
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 136 XXXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQC-GTPAYVAPEVLRKKGYDGSK 192
+ DFG + P+ L D L GT ++APEV+ + D +K
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD-AK 252
Query: 193 ADLWSCGVILYVLLAGFLPF 212
D+WS ++ +L G P+
Sbjct: 253 VDVWSSCCMMLHMLNGCHPW 272
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 15/268 (5%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V+ +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + + GR+ E + K +I + + + + HR
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 150
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+ DFG+S QL D + ++ GT +Y++PE L+ Y ++D+
Sbjct: 151 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 205
Query: 196 WSCGVILYVLLAGFLPF-QDENIMNMYRKVFKAEFVYPPWI-----STDAKRLISKLLVS 249
WS G+ L + G P M ++ + PP + S + + ++K L+
Sbjct: 206 WSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 265
Query: 250 DPERRITIQSIMRVPWFRKGFTRPVAFS 277
+P R ++ +M + ++ V F+
Sbjct: 266 NPAERADLKQLMVHAFIKRSDAEEVDFA 293
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G+F +V+ K TG A+K + + + E E+ + P +V L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGLSSPRIVPLYG 131
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSH-RXX 135
+ + + ME ++GG L + + G L ED A Y Q + +++ H+R + H
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC------GTPAYVAPEVLRKKGYD 189
+ DFG + L+ DGL + GT ++APEV+ K D
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALC---LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 190 GSKADLWSCGVILYVLLAGFLPF 212
+K D+WS ++ +L G P+
Sbjct: 249 -AKVDIWSSCCMMLHMLNGCHPW 270
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 12/227 (5%)
Query: 16 RLLGKGTFAKVYYGKQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNV 72
+++G G F +V G + G+ VAIK + +K+ E S+M HPNV
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ--RRDFLSEASIMGQFDHPNV 96
Query: 73 VELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
+ L V+ + + E+++ G L F + G+ + + + + +
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 156
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG--TPA-YVAPEVLRKKG 187
HR +SDFGLS E +D + G P + APE ++ +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 188 YDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
+ S +D+WS G++++ V+ G P+ D ++ + + + PP
Sbjct: 217 FT-SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP 262
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 18/279 (6%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESV-AIKVINKDQLKKEFMMEQIKREI 61
EERH+ + LGKG F V + G++ A+ + + Q +REI
Sbjct: 9 EERHLKYISQ-----LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREI 63
Query: 62 SVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLARK--YFQQ 117
+++ + +V+ R V ++ + + MEY+ G L + R R R D +R Y Q
Sbjct: 64 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 123
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
+ +++ SR HR I+DFGL+ L ++ ++ +P +
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 183
Query: 178 -VAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNM--YRKVFKAEFVYPPW 234
APE L + ++D+WS GV+LY L + D++ + ++ E P
Sbjct: 184 WYAPESLSDNIFS-RQSDVWSFGVVLYELFT----YCDKSCSPSAEFLRMMGCERDVPAL 238
Query: 235 ISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ L + P + +M++ W RP
Sbjct: 239 CRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRP 277
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESV-AIKVINKDQLKKEFMMEQIKREI 61
EERH+ + LGKG F V + G++ A+ + + Q +REI
Sbjct: 8 EERHLKYISQ-----LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREI 62
Query: 62 SVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLARK--YFQQ 117
+++ + +V+ R V ++ + + MEY+ G L + R R R D +R Y Q
Sbjct: 63 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 122
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
+ +++ SR HR I+DFGL+ L ++ ++ +P +
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 182
Query: 178 -VAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
APE L + ++D+WS GV+LY L
Sbjct: 183 WYAPESLSDNIF-SRQSDVWSFGVVLYELFT 212
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 12/227 (5%)
Query: 16 RLLGKGTFAKVYYGKQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNV 72
+++G G F +V G + G+ VAIK + +K+ E S+M HPNV
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ--RRDFLSEASIMGQFDHPNV 70
Query: 73 VELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSRGV 130
+ L V+ + + E+++ G L F + G+ + + + + +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 130
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG--TPA-YVAPEVLRKKG 187
HR +SDFGLS E +D + G P + APE ++ +
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 190
Query: 188 YDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
+ S +D+WS G++++ V+ G P+ D ++ + + + PP
Sbjct: 191 FT-SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP 236
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 103
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGL+ + E P + +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 80
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ +EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 81 VV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIED--NEXTARQGAKFPIKWTAPEAAL-YGRFTIKS 196
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 254
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 255 DPEERPTFEYL 265
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 9/253 (3%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G++ +V+ + G A+K + ++ S ++ +HP V L +
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 78 VMATKKKIFVAMEYVKGG-ELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHRXXX 136
+++ E + + L E Y + + A+ HS+G+ H
Sbjct: 125 AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVK 184
Query: 137 XXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLW 196
+ DFGL +L G Q G P Y+APE+L +G G+ AD++
Sbjct: 185 PANIFLGPRGRCKLGDFGLLV---ELGTAGAGEVQEGDPRYMAPELL--QGSYGTAADVF 239
Query: 197 SCGV-ILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRI 255
S G+ IL V LP E + + EF +S++ + ++ +L DP+ R
Sbjct: 240 SLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTA--GLSSELRSVLVMMLEPDPKLRA 297
Query: 256 TIQSIMRVPWFRK 268
T ++++ +P R+
Sbjct: 298 TAEALLALPVLRQ 310
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 80
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ MEY+ G L F K G+ LR Q+ S + + HR
Sbjct: 81 VV-SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 196
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 254
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 255 DPEERPTFEYL 265
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESV-AIKVINKDQLKKEFMMEQIKREI 61
EERH+ + LGKG F V + G++ A+ + + Q +REI
Sbjct: 21 EERHLKYISQ-----LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREI 75
Query: 62 SVMRLVRHPNVVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLARK--YFQQ 117
+++ + +V+ R V ++ + + MEY+ G L + R R R D +R Y Q
Sbjct: 76 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 135
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAY 177
+ +++ SR HR I+DFGL+ L ++ ++ +P +
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 195
Query: 178 -VAPEVLRKKGYDGSKADLWSCGVILYVLL 206
APE L + ++D+WS GV+LY L
Sbjct: 196 WYAPESLSDNIFS-RQSDVWSFGVVLYELF 224
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 103
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + EY++ G L LR+ A+ QL+ S
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGL + E P + +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 80
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ +EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 81 VV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 196
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 254
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 255 DPEERPTFEYL 265
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKIRHEKLVQLYA 80
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 196
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 254
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 255 DPEERPTFEYL 265
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 193 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMSPEAFLQ----EAQVMKKLRHEKLVQLYA 247
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 248 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL L E N+ P + APE G K+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 363
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 421
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 422 DPEERPTFEYL 432
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 21/274 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V+ +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + + GR+ E + K +I + + + + HR
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+ DFG+S QL D + ++ GT +Y++PE L+ Y ++D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGFLPFQDENIMNMYRK---VFK-AEFVY---PPWI-----STDAKRLI 243
WS G+ L + G P + R +F+ +++ PP + S + + +
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 246
Query: 244 SKLLVSDPERRITIQSIMRVPWFRKGFTRPVAFS 277
+K L+ +P R ++ +M + ++ V F+
Sbjct: 247 NKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFA 280
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+F +V+ K TG A+K + + + E E+ + P +V L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGLSSPRIVPLYG 117
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSH-RXX 135
+ + + ME ++GG L + + G L ED A Y Q + +++ H+R + H
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC------GTPAYVAPEVLRKKGYD 189
+ DFG + L+ DGL + GT ++APEV+ K D
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALC---LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 190 GSKADLWSCGVILYVLLAGFLPF 212
+K D+WS ++ +L G P+
Sbjct: 235 -AKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 80
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 196
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 254
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 255 DPEERPTFEYL 265
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 103
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + E ++ G L LR+ A+ QL+ S
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 80
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 81 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 196
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 254
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 255 DPEERPTFEYL 265
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+F +V+ K TG A+K + + + E E+ + P +V L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGLSSPRIVPLYG 133
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRGVSH-RXX 135
+ + + ME ++GG L + + G L ED A Y Q + +++ H+R + H
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQC------GTPAYVAPEVLRKKGYD 189
+ DFG + L+ DGL + GT ++APEV+ K D
Sbjct: 194 ADNVLLSSDGSRAALCDFGHALC---LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 190 GSKADLWSCGVILYVLLAGFLPF 212
+K D+WS ++ +L G P+
Sbjct: 251 -AKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 19/252 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGE-SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V GK G+ VA+K+I + + ++ + +E M + HP +V+
Sbjct: 16 LGSGQFGVVKLGK--WKGQYDVAVKMIKEGSMSED----EFFQEAQTMMKLSHPKLVKFY 69
Query: 77 EVMATKKKIFVAMEYVKGGELFAKV-ARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V + + I++ EY+ G L + + G+ L + + + F S HR
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRD 129
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT--PA-YVAPEVLRKKGYDGS 191
+SDFG++ + D + GT P + APEV Y S
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMT----RYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY-SS 184
Query: 192 KADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTDA-KRLISKLLVS 249
K+D+W+ G++++ V G +P+ + KV + +Y P +++D +++
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHE 244
Query: 250 DPERRITIQSIM 261
PE+R T Q ++
Sbjct: 245 LPEKRPTFQQLL 256
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 17 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 71
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 72 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 187
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 245
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 246 DPEERPTFEYL 256
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 15 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 69
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 70 VV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 185
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 243
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 244 DPEERPTFEYL 254
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 80
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 81 VV-SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 196
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 254
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 255 DPEERPTFEYL 265
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 275 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 329
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 330 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTP-AYVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 445
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPCPPECPESLHDLMCQCWRK 503
Query: 250 DPERRITIQSI 260
+PE R T + +
Sbjct: 504 EPEERPTFEYL 514
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 103
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + E ++ G L LR+ A+ QL+ S
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 218
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 114/298 (38%), Gaps = 42/298 (14%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ +G G + V ++ +TG+ VAIK I + ++ RE+ +++ +H
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 71 NVVELREVMATK------KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDF 124
N++ +++++ K ++V ++ ++ + L + R + QL+ + +
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 125 CHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV 182
HS V HR I DFG++ + + T Y APE+
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMY--------------------- 221
+ DLWS G I +LA F +N ++
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 293
Query: 222 -----------RKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
R+ E VY P A L+ ++L +P RI+ + +R P+ K
Sbjct: 294 RVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 26/235 (11%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGE---SVAIKVIN---KDQLKKEFMMEQIKREISVMRLV 67
+ +++G G F +V G+ + + SVAIK + ++ +++F+ E S+M
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA-----SIMGQF 74
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-------S 120
HPN++ L V+ K + + E ++ G L LR+ A+ QL+ S
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-----DSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 121 AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVA 179
+ + G HR +SDFGLS + E P + +
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTS 189
Query: 180 PEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
PE + + + S +D+WS G++L+ V+ G P+ + + ++ + V + + PP
Sbjct: 190 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 243
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 120/323 (37%), Gaps = 70/323 (21%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIK-VINK-------DQLKKEFMME 55
E H + Y + R + G++ V G G VAIK V N + L F+ +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 56 QIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--- 112
++ REI ++ HPN++ LR+ IFV E +L+ + +R DLA+
Sbjct: 75 RVLREIRLLNHFHHPNILGLRD-------IFVHFEEPAMHKLY--LVTELMRTDLAQVIH 125
Query: 113 -----------KYFQ-QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPE 160
+YF ++ + H GV HR I DF L+ E
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--E 183
Query: 161 QLRNDGLLHTQCGTPAYVAPE-VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMN 219
+ H Y APE V++ KG+ D+WS G ++ + F+ N
Sbjct: 184 DTADANKTH-YVTHRWYRAPELVMQFKGF-TKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241
Query: 220 MYRKVFK----------AEFVYP----------------------PWISTDAKRLISKLL 247
K+ + F P P A LI+K+L
Sbjct: 242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKML 301
Query: 248 VSDPERRITIQSIMRVPWFRKGF 270
+P+RRI+ + +R P+F F
Sbjct: 302 EFNPQRRISTEQALRHPYFESLF 324
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
L+G G F KVY G L G VA+K + + E +S RHP++V L
Sbjct: 46 LIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLS---FCRHPHLVSLI 101
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL---ISA---VDFCHSRGV 130
+ ++ + +Y++ G L + G ++ + Q+L I A + + H+R +
Sbjct: 102 GFCDERNEMILIYKYMENGNL-KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG+S +L L GT Y+ PE KG
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYF-IKGRLT 219
Query: 191 SKADLWSCGVILYVLLAG 208
K+D++S GV+L+ +L
Sbjct: 220 EKSDVYSFGVVLFEVLCA 237
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+G+G+F VY G T VA + +L K ++ K E ++ ++HPN+V +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS-ERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 78 ----VMATKKKIFVAMEYVKGGELFAKVARGRLRE-DLARKYFQQLISAVDFCHSRG--V 130
+ KK I + E G L + R ++ + + R + +Q++ + F H+R +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 131 SHRXXXXXXX-XXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYD 189
HR I D GL+ L+ GTP + APE +K YD
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIGTPEFXAPEXYEEK-YD 207
Query: 190 GSKADLWSCGVILYVLLAGFLPFQD-ENIMNMYRKVFKAEFVYPPWIS----TDAKRLIS 244
S D+++ G P+ + +N +YR+V V P + K +I
Sbjct: 208 ES-VDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSG--VKPASFDKVAIPEVKEIIE 264
Query: 245 KLLVSDPERRITIQSIMRVPWFRK 268
+ + + R +I+ ++ +F++
Sbjct: 265 GCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 80 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 139
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 140 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 194
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ 171
I + F S+ HR ++DFGL+ D + H +
Sbjct: 195 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV-HNK 253
Query: 172 CGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKA 227
G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ + +
Sbjct: 254 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ- 311
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+RL+ DP + ++ W K RP
Sbjct: 312 -----------GRRLLQPEYCPDPLYEVMLKC-----WHPKAEMRP 341
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 120/323 (37%), Gaps = 70/323 (21%)
Query: 4 ERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIK-VINK-------DQLKKEFMME 55
E H + Y + R + G++ V G G VAIK V N + L F+ +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 56 QIKREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR--- 112
++ REI ++ HPN++ LR+ IFV E +L+ + +R DLA+
Sbjct: 75 RVLREIRLLNHFHHPNILGLRD-------IFVHFEEPAMHKLY--LVTELMRTDLAQVIH 125
Query: 113 -----------KYFQ-QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPE 160
+YF ++ + H GV HR I DF L+ E
Sbjct: 126 DQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--E 183
Query: 161 QLRNDGLLHTQCGTPAYVAPE-VLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMN 219
+ H Y APE V++ KG+ D+WS G ++ + F+ N
Sbjct: 184 DTADANKTH-YVTHRWYRAPELVMQFKGF-TKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241
Query: 220 MYRKVFK----------AEFVYP----------------------PWISTDAKRLISKLL 247
K+ + F P P A LI+K+L
Sbjct: 242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKML 301
Query: 248 VSDPERRITIQSIMRVPWFRKGF 270
+P+RRI+ + +R P+F F
Sbjct: 302 EFNPQRRISTEQALRHPYFESLF 324
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 114/298 (38%), Gaps = 42/298 (14%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ +G G + V ++ +TG+ VAIK I + ++ RE+ +++ +H
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 71 NVVELREVMATK------KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDF 124
N++ +++++ K ++V ++ ++ + L + R + QL+ + +
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 125 CHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLHTQCGTPAYVAPEV 182
HS V HR I DFG++ + + T Y APE+
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 183 LRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMY--------------------- 221
+ DLWS G I +LA F +N ++
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 294
Query: 222 -----------RKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
R+ E VY P A L+ ++L +P RI+ + +R P+ K
Sbjct: 295 RVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 246
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V++ ++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 247 VVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 362
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 420
Query: 250 DPERRITIQSI 260
+PE R T + +
Sbjct: 421 EPEERPTFEYL 431
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 136
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ 171
I + F S+ HR ++DFGL+ D + H +
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV-HNK 195
Query: 172 CGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKA 227
G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ + +
Sbjct: 196 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ- 253
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+RL+ DP + +M W K RP
Sbjct: 254 -----------GRRLLQPEYCPDP-----LYEVMLKCWHPKAEMRP 283
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 246
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V++ ++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 247 VVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 362
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 420
Query: 250 DPERRITIQSI 260
+PE R T + +
Sbjct: 421 EPEERPTFEYL 431
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 77
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 78 VV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIED--NEWTARQGAKFPIKWTAPEAAL-YGRFTIKS 193
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 251
Query: 250 DPERRITIQSI 260
+PE R T + +
Sbjct: 252 EPEERPTFEYL 262
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 121/290 (41%), Gaps = 41/290 (14%)
Query: 1 MEEERHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMME 55
++ +HV+ G + ++G+G F VY+G L G+ + V + +++ +
Sbjct: 17 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS 76
Query: 56 QIKREISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY 114
Q E +M+ HPNV+ L + + ++ V + Y+K G+L R +R +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPT 131
Query: 115 FQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL 167
+ LI + F S+ HR ++DFGL+ D +
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 191
Query: 168 LHTQCGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
H + G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++
Sbjct: 192 -HNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 249
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + +RL+ DP + +M W K RP
Sbjct: 250 LLQ------------GRRLLQPEYCPDP-----LYEVMLKCWHPKAEMRP 282
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 80
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 81 VV-SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 196
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 254
Query: 250 DPERRITIQSI 260
DPE R T + +
Sbjct: 255 DPEERPTFEYL 265
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 122/288 (42%), Gaps = 45/288 (15%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 136
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS--ALPEQLRNDGLLH 169
I + F S+ HR ++DFGL+ L ++ + +H
Sbjct: 137 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDS---VH 193
Query: 170 TQCGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVF 225
+ G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ +
Sbjct: 194 NKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 252
Query: 226 KAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ +RL+ DP + +M W K RP
Sbjct: 253 Q------------GRRLLQPEYCPDP-----LYEVMLKCWHPKAEMRP 283
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 121/290 (41%), Gaps = 41/290 (14%)
Query: 1 MEEERHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMME 55
++ +HV+ G + ++G+G F VY+G L G+ + V + +++ +
Sbjct: 15 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS 74
Query: 56 QIKREISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY 114
Q E +M+ HPNV+ L + + ++ V + Y+K G+L R +R +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPT 129
Query: 115 FQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL 167
+ LI + F S+ HR ++DFGL+ D +
Sbjct: 130 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 189
Query: 168 LHTQCGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
H + G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++
Sbjct: 190 -HNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 247
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + +RL+ DP + +M W K RP
Sbjct: 248 LLQ------------GRRLLQPEYCPDP-----LYEVMLKCWHPKAEMRP 280
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 41/290 (14%)
Query: 1 MEEERHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMME 55
++ +HV+ G + ++G+G F VY+G L G+ + V + +++ +
Sbjct: 17 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS 76
Query: 56 QIKREISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY 114
Q E +M+ HPNV+ L + + ++ V + Y+K G+L R +R +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPT 131
Query: 115 FQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL 167
+ LI + F S+ HR ++DFGL+ D +
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 191
Query: 168 LHTQCGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
H + G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++
Sbjct: 192 -HNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 249
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + +RL+ DP + ++ W K RP
Sbjct: 250 LLQ------------GRRLLQPEYCPDPLYEVMLKC-----WHPKAEMRP 282
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 41/290 (14%)
Query: 1 MEEERHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMME 55
++ +HV+ G + ++G+G F VY+G L G+ + V + +++ +
Sbjct: 22 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS 81
Query: 56 QIKREISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY 114
Q E +M+ HPNV+ L + + ++ V + Y+K G+L R +R +
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPT 136
Query: 115 FQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL 167
+ LI + F S+ HR ++DFGL+ D +
Sbjct: 137 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 196
Query: 168 LHTQCGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
H + G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++
Sbjct: 197 -HNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 254
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + +RL+ DP + ++ W K RP
Sbjct: 255 LLQ------------GRRLLQPEYCPDPLYEVMLKC-----WHPKAEMRP 287
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
L+G G F KVY G L G VA+K + + E +S RHP++V L
Sbjct: 46 LIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLS---FCRHPHLVSLI 101
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL---ISA---VDFCHSRGV 130
+ ++ + +Y++ G L + G ++ + Q+L I A + + H+R +
Sbjct: 102 GFCDERNEMILIYKYMENGNL-KRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFG+S +L L GT Y+ PE KG
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYF-IKGRLT 219
Query: 191 SKADLWSCGVILYVLLAG 208
K+D++S GV+L+ +L
Sbjct: 220 EKSDVYSFGVVLFEVLCA 237
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 77
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 78 VV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 193
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 251
Query: 250 DPERRITIQSI 260
+PE R T + +
Sbjct: 252 EPEERPTFEYL 262
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMR 65
HV + +YE+ +++GKG+F +V + VA+K++ + K F Q EI ++
Sbjct: 94 HVAY-RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRF-HRQAAEEIRILE 148
Query: 66 LVRHP------NVVELREVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQ 117
+R NV+ + E + I + E + EL K L RK+
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXIS--DFGLSALPEQLRNDGLLHTQCGTP 175
++ +D H + H I DFG S Q ++T +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-----RVYTXIQSR 263
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGF--LPFQDE 215
Y APEV+ Y G D+WS G IL LL G+ LP +DE
Sbjct: 264 FYRAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMR 65
HV + +YE+ +++GKG+F +V + VA+K++ + K F Q EI ++
Sbjct: 94 HVAY-RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRF-HRQAAEEIRILE 148
Query: 66 LVRHP------NVVELREVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQ 117
+R NV+ + E + I + E + EL K L RK+
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXIS--DFGLSALPEQLRNDGLLHTQCGTP 175
++ +D H + H I DFG S Q ++T +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-----RVYTXIQSR 263
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGF--LPFQDE 215
Y APEV+ Y G D+WS G IL LL G+ LP +DE
Sbjct: 264 FYRAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 246
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 247 VV-SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 362
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 420
Query: 250 DPERRITIQSI 260
+PE R T + +
Sbjct: 421 EPEERPTFEYL 431
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/308 (18%), Positives = 120/308 (38%), Gaps = 49/308 (15%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVY-------------YGKQLMTGESVAIKVINKDQLK 49
+E+ Y + R L +G F K+ Y K L+ + K N D++
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKS-NNDKIS 82
Query: 50 KEFMMEQIKREISVMRLVRHPNVVELREVMATKKKIFVAMEY------VKGGELFAKVAR 103
+ + K E+ ++ +++ + ++ ++++ EY +K E F + +
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 104 GR---LREDLARKYFQQLISAVDFCHS-RGVSHRXXXXXXXXXXXXXXXXISDFGLSALP 159
+ + + + ++++ + H+ + + HR +SDFG S
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGES--- 199
Query: 160 EQLRNDGLLHTQCGTPAYVAPEVL-RKKGYDGSKADLWSCGVILYVLLAGFLP------- 211
+ D + GT ++ PE + Y+G+K D+WS G+ LYV+ +P
Sbjct: 200 -EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258
Query: 212 ---FQDENIMNMYRKVFKAEFVYP----------PWISTDAKRLISKLLVSDPERRITIQ 258
F + N+ + + F+YP ++S + + L +P RIT +
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Query: 259 SIMRVPWF 266
++ W
Sbjct: 319 DALKHEWL 326
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 19 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 73
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I++ EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 74 VV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRFTIKS 189
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRK 247
Query: 250 DPERRITIQSI 260
+PE R T + +
Sbjct: 248 EPEERPTFEYL 258
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 104/253 (41%), Gaps = 13/253 (5%)
Query: 18 LGKGTFAKVYYGK-QLMTGE--SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G+F V G+ +G+ SVA+K + D L + M+ RE++ M + H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRGVSH 132
L V+ T V E G L ++ + G +Y Q+ + + S+ H
Sbjct: 86 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 133 RXXXXXXXXXXXXXXXXISDFGL-SALPEQLRNDGLLHTQCGTP-AYVAPEVLRKKGYDG 190
R I DFGL ALP+ + ++ P A+ APE L+ + +
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHXVMQEHRKVPFAWCAPESLKTRTFSH 203
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFK--AEFVYPPWISTDAKRLISKLL 247
+ +D W GV L+ + G P+ N + K+ K P D ++ +
Sbjct: 204 A-SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCW 262
Query: 248 VSDPERRITIQSI 260
PE R T ++
Sbjct: 263 AHKPEDRPTFVAL 275
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
+LG+G F KVY G+ L G VA+K + +++ + + Q + E+ ++ + H N++ LR
Sbjct: 45 ILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGEL--QFQTEVEMISMAVHRNLLRLR 101
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGRL----------REDLARKYFQQLISAVDFCH 126
T + + Y+ G + A R R R+ +A + L D C
Sbjct: 102 GFCMTPTERLLVYPYMANGSV-ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 160
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ + HR + DFGL+ L + ++ + GT ++APE L
Sbjct: 161 PK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDXHVXXAVRGTIGHIAPEYL-ST 217
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMN 219
G K D++ GV+L L+ G F + N
Sbjct: 218 GKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 250
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V+ +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 133
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + + GR+ E + K +I + + + + HR
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+ DFG+S QL D + ++ GT +Y++PE L+ Y ++D+
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 248
Query: 196 WSCGVILYVLLAGFLPF 212
WS G+ L + G P
Sbjct: 249 WSMGLSLVEMAVGRYPI 265
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V+ +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + + GR+ E + K +I + + + + HR
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+ DFG+S QL D + ++ GT +Y++PE L+ Y ++D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGFLPF 212
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 31/221 (14%)
Query: 13 EMGRLLGKGTFAKVYYGKQLMTGESVAIK-VINKDQLKKEFMME---QIKREISVMRLVR 68
E + +GKG F V+ G+ + VAIK +I D + M+E + +RE+ +M +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKV----------ARGRLREDLAR--KYFQ 116
HPN+V+L +M ++ ME+V G+L+ ++ + RL D+A +Y Q
Sbjct: 82 HPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN-DGLLHTQCGTP 175
+ H R + ++DFGLS + + + GLL G
Sbjct: 140 NQNPPI--VH-RDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLL----GNF 190
Query: 176 AYVAPEVL--RKKGYDGSKADLWSCGVILYVLLAGFLPFQD 214
++APE + ++ Y KAD +S +ILY +L G PF +
Sbjct: 191 QWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE 230
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V+ +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + + GR+ E + K +I + + + + HR
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+ DFG+S QL D + ++ GT +Y++PE L+ Y ++D+
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 213
Query: 196 WSCGVILYVLLAGFLPF 212
WS G+ L + G P
Sbjct: 214 WSMGLSLVEMAVGRYPI 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V+ +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + + GR+ E + K +I + + + + HR
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+ DFG+S QL D + ++ GT +Y++PE L+ Y ++D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGFLPF 212
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 10/193 (5%)
Query: 18 LGKGTFAKVYYGK-QLMTGE--SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G+F V G+ +G+ SVA+K + D L + M+ RE++ M + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRGVSH 132
L V+ T V E G L ++ + G +Y Q+ + + S+ H
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 133 RXXXXXXXXXXXXXXXXISDFGL-SALPEQLRNDGLLHTQCGTP-AYVAPEVLRKKGYDG 190
R I DFGL ALP+ + ++ P A+ APE L+ + +
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQN-DDHXVMQEHRKVPFAWCAPESLKTRTFSH 193
Query: 191 SKADLWSCGVILY 203
+ +D W GV L+
Sbjct: 194 A-SDTWMFGVTLW 205
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 17/255 (6%)
Query: 18 LGKGTFAKVYYGK-QLMTGE--SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G+F V G+ +G+ SVA+K + D L + M+ RE++ M + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRGVSH 132
L V+ T V E G L ++ + G +Y Q+ + + S+ H
Sbjct: 80 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 133 RXXXXXXXXXXXXXXXXISDFGL-SALPEQLRNDG--LLHTQCGTP-AYVAPEVLRKKGY 188
R I DFGL ALP+ ND ++ P A+ APE L+ + +
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 189 DGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFK--AEFVYPPWISTDAKRLISK 245
+ +D W GV L+ + G P+ N + K+ K P D ++ +
Sbjct: 196 SHA-SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQ 254
Query: 246 LLVSDPERRITIQSI 260
PE R T ++
Sbjct: 255 CWAHKPEDRPTFVAL 269
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V+ +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + + GR+ E + K +I + + + + HR
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+ DFG+S QL D + ++ GT +Y++PE L+ Y ++D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGFLPF 212
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V+ +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + + GR+ E + K +I + + + + HR
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+ DFG+S QL D + ++ GT +Y++PE L+ Y ++D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 196 WSCGVILYVLLAGFLPF 212
WS G+ L + G P
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 29 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 82
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 83 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIK 198
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 199 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 27 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 80
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 81 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIK 196
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 22 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 75
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 76 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIK 191
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 74
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIK 190
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 30 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 83
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 84 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIK 199
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 200 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 74
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIK 190
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 23 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 76
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 77 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPEAI-NYGTFTIK 192
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 193 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 17/255 (6%)
Query: 18 LGKGTFAKVYYGK-QLMTGE--SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G+F V G+ +G+ SVA+K + D L + M+ RE++ M + H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRGVSH 132
L V+ T V E G L ++ + G +Y Q+ + + S+ H
Sbjct: 86 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 133 RXXXXXXXXXXXXXXXXISDFGL-SALPEQLRNDG--LLHTQCGTP-AYVAPEVLRKKGY 188
R I DFGL ALP+ ND ++ P A+ APE L+ + +
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTF 201
Query: 189 DGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFK--AEFVYPPWISTDAKRLISK 245
+ +D W GV L+ + G P+ N + K+ K P D ++ +
Sbjct: 202 SHA-SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQ 260
Query: 246 LLVSDPERRITIQSI 260
PE R T ++
Sbjct: 261 CWAHKPEDRPTFVAL 275
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 14/195 (7%)
Query: 18 LGKGTFAKVYYGK-QLMTGE--SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G+F V G+ +G+ SVA+K + D L + M+ RE++ M + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRGVSH 132
L V+ T V E G L ++ + G +Y Q+ + + S+ H
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 133 RXXXXXXXXXXXXXXXXISDFGL-SALPEQLRNDG--LLHTQCGTP-AYVAPEVLRKKGY 188
R I DFGL ALP+ ND ++ P A+ APE L+ + +
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 189 DGSKADLWSCGVILY 203
+ +D W GV L+
Sbjct: 192 SHA-SDTWMFGVTLW 205
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 14/195 (7%)
Query: 18 LGKGTFAKVYYGK-QLMTGE--SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G+F V G+ +G+ SVA+K + D L + M+ RE++ M + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRGVSH 132
L V+ T V E G L ++ + G +Y Q+ + + S+ H
Sbjct: 80 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 133 RXXXXXXXXXXXXXXXXISDFGL-SALPEQLRNDG--LLHTQCGTP-AYVAPEVLRKKGY 188
R I DFGL ALP+ ND ++ P A+ APE L+ + +
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 189 DGSKADLWSCGVILY 203
+ +D W GV L+
Sbjct: 196 SHA-SDTWMFGVTLW 209
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 19/251 (7%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG+G F +V+ G T VAIK + + E ++ E VM+ +RH +V+L
Sbjct: 16 LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHEKLVQLYA 70
Query: 78 VMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ +++ I + EY+ G L F K G+ LR Q+ S + + HR
Sbjct: 71 VV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
++DFGL+ L E N+ P + APE G K+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIED--NEXTARQGAKFPIKWTAPEAAL-YGRFTIKS 186
Query: 194 DLWSCGVILYVLLA-GFLPFQ---DENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVS 249
D+WS G++L L G +P+ + +++ + ++ PP L+ +
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--MPCPPECPESLHDLMCQCWRK 244
Query: 250 DPERRITIQSI 260
+PE R T + +
Sbjct: 245 EPEERPTFEYL 255
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 14/195 (7%)
Query: 18 LGKGTFAKVYYGK-QLMTGE--SVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G+F V G+ +G+ SVA+K + D L + M+ RE++ M + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVAR--GRLREDLARKYFQQLISAVDFCHSRGVSH 132
L V+ T V E G L ++ + G +Y Q+ + + S+ H
Sbjct: 76 LYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 133 RXXXXXXXXXXXXXXXXISDFGL-SALPEQLRNDG--LLHTQCGTP-AYVAPEVLRKKGY 188
R I DFGL ALP+ ND ++ P A+ APE L+ + +
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 189 DGSKADLWSCGVILY 203
+ +D W GV L+
Sbjct: 192 SHA-SDTWMFGVTLW 205
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 20 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 79
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 134
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ 171
I + + S+ HR ++DFGL A + +H +
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEXXSVHNK 193
Query: 172 CGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKA 227
G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ + +
Sbjct: 194 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ- 251
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+RL+ DP + +M W K RP
Sbjct: 252 -----------GRRLLQPEYCPDP-----LYEVMLKCWHPKAEMRP 281
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 31 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 84
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 85 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAI-NYGTFTIK 200
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 26 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 79
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 80 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAI-NYGTFTIK 195
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 27 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 80
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 81 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAI-NYGTFTIK 196
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 74
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAI-NYGTFTIK 190
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 17 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 70
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 71 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAI-NYGTFTIK 186
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 16 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 69
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 70 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE + G K
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPEAI-NYGTFTIK 185
Query: 193 ADLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
+D+WS G++L ++ G +P+ E I N+ R
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 35/228 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ L+G G++ V + VAIK I + + ++I REI+++ + H
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR-VFEDLIDCKRILREIAILNRLNHD 112
Query: 71 NVVELREVMATK-----KKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVD 123
+VV++ +++ K +++V +E F K+ R L E + L+ V
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLLVGVK 170
Query: 124 FCHSRGVSHRXXXXXXXXXXXXXXXXISDFGL-----------SALPEQLRNDGL----- 167
+ HS G+ HR + DFGL S LP R D +
Sbjct: 171 YVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 168 ---------LHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLL 206
L T Y APE++ + D+WS G I LL
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 233 PWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRK 268
P S DA L+ ++LV +P +RITI + P+F++
Sbjct: 367 PASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 109/253 (43%), Gaps = 23/253 (9%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F +V+ G G + VAIK + + E +E E +M+ ++H +V+L
Sbjct: 17 LGNGQFGEVWMGT--WNGNTKVAIKTLKPGTMSPESFLE----EAQIMKKLKHDKLVQLY 70
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ +++ I++ EY+ G L F K GR L+ Q+ + + + HR
Sbjct: 71 AVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHR 129
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
I+DFGL+ L E N+ P + APE G K
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIED--NEXTARQGAKFPIKWTAPEAAL-YGRFTIK 186
Query: 193 ADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLV--- 248
+D+WS G++L L+ G +P+ N + +V + + P D + +L++
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCP---QDCPISLHELMIHCW 243
Query: 249 -SDPERRITIQSI 260
DPE R T + +
Sbjct: 244 KKDPEERPTFEYL 256
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGES----VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++LG G F V+ G + GES V IKVI ++ F + + + + + H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF--QAVTDHMLAIGSLDHAH 94
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKV--ARGRLREDLARKYFQQLISAVDFCHSRG 129
+V L + + + +Y+ G L V RG L L + Q+ + + G
Sbjct: 95 IVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKG 187
+ HR ++DFG++ LP + LL+++ TP ++A E +
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD--DKQLLYSEAKTPIKWMALESIHFGK 211
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAEFVYPPWIST-DAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + + K E + P I T D ++ K
Sbjct: 212 YT-HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVK 270
Query: 246 LLVSDPERRITIQSI 260
+ D R T + +
Sbjct: 271 CWMIDENIRPTFKEL 285
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGES----VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++LG G F V+ G + GES V IKVI ++ F + + + + + H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF--QAVTDHMLAIGSLDHAH 76
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKV--ARGRLREDLARKYFQQLISAVDFCHSRG 129
+V L + + + +Y+ G L V RG L L + Q+ + + G
Sbjct: 77 IVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKG 187
+ HR ++DFG++ LP + LL+++ TP ++A E +
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD--DKQLLYSEAKTPIKWMALESIHFGK 193
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAEFVYPPWIST-DAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + + K E + P I T D ++ K
Sbjct: 194 YT-HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVK 252
Query: 246 LLVSDPERRITIQSI 260
+ D R T + +
Sbjct: 253 CWMIDENIRPTFKEL 267
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 26/265 (9%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMRLV 67
++ +GR+LGKG F V + S VA+K++ D + +E+ RE + M+
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD-IEEFLREAACMKEF 82
Query: 68 RHPNV-----VELREVMATKKKI-FVAMEYVKGGELFAKVARGRLREDLARKYFQQLI-- 119
HP+V V LR + I V + ++K G+L A + R+ E+ Q L+
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 120 -----SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGT 174
+++ SR HR ++DFGLS ++ + C +
Sbjct: 143 MVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS---RKIYSGDYYRQGCAS 199
Query: 175 --PA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAE-F 229
P ++A E L Y +D+W+ GV ++ ++ G P+ +Y +
Sbjct: 200 KLPVKWLALESLADNLYT-VHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL 258
Query: 230 VYPPWISTDAKRLISKLLVSDPERR 254
PP + L+ + +DP++R
Sbjct: 259 KQPPECMEEVYDLMYQCWSADPKQR 283
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEXSYDINRVPEE 152
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 209
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 174 TPAYVAPEVLRKKGYDGSK--ADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEF-- 229
PA+VAPE L+KK D ++ AD+WS V+L+ L+ +PF D + M + KV
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP 230
Query: 230 VYPPWISTDAKRLISKLLVSDPERRITIQSIMRV 263
PP IS +L+ + DP +R I+ +
Sbjct: 231 TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 31/272 (11%)
Query: 13 EMGRLLGKGTFAKVYYGKQLMTGES-----VAIKVINKDQLKKEFMMEQIKREISVM-RL 66
+ G+ LG G F KV G+ VA+K++ E E + E+ +M L
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHL 98
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK------------Y 114
+H N+V L + V EY G+L R + DL ++ +
Sbjct: 99 GQHENIVNLLGACTHGGPVLVITEYCCYGDLL-NFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG--LLHTQC 172
Q+ + F S+ HR I DFGL+ + ND ++
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNA 214
Query: 173 GTPA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFK--AE 228
P ++APE + Y ++D+WS G++L+ + + G P+ + + + K+ K +
Sbjct: 215 RLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 273
Query: 229 FVYPPWISTDAKRLISKLLVSDPERRITIQSI 260
P + + ++ +P R T Q I
Sbjct: 274 MAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 125/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 152
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 209
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D +T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 210 IDYYKNTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 13 EMGRLLGKGTFAKVYYGKQLMTGESVAIK-VINKDQLKKEFMME---QIKREISVMRLVR 68
E + +GKG F V+ G+ + VAIK +I D + M+E + +RE+ +M +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKV----------ARGRLREDLAR--KYFQ 116
HPN+V+L +M ++ ME+V G+L+ ++ + RL D+A +Y Q
Sbjct: 82 HPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN-DGLLHTQCGTP 175
+ H R + ++DFG S + + + GLL G
Sbjct: 140 NQNPPI--VH-RDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLL----GNF 190
Query: 176 AYVAPEVL--RKKGYDGSKADLWSCGVILYVLLAGFLPFQD 214
++APE + ++ Y KAD +S +ILY +L G PF +
Sbjct: 191 QWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE 230
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 31/272 (11%)
Query: 13 EMGRLLGKGTFAKVYYGKQLMTGES-----VAIKVINKDQLKKEFMMEQIKREISVM-RL 66
+ G+ LG G F KV G+ VA+K++ E E + E+ +M L
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHL 106
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARK------------Y 114
+H N+V L + V EY G+L R + DL ++ +
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLL-NFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG--LLHTQC 172
Q+ + F S+ HR I DFGL+ + ND ++
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNA 222
Query: 173 GTPA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFK--AE 228
P ++APE + Y ++D+WS G++L+ + + G P+ + + + K+ K +
Sbjct: 223 RLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 281
Query: 229 FVYPPWISTDAKRLISKLLVSDPERRITIQSI 260
P + + ++ +P R T Q I
Sbjct: 282 MAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 135
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ 171
I + + S+ HR ++DFGL A + +H +
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNK 194
Query: 172 CGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKA 227
G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ + +
Sbjct: 195 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ- 252
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+RL+ DP + +M W K RP
Sbjct: 253 -----------GRRLLQPEYCPDP-----LYEVMLKCWHPKAEMRP 282
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 13 EMGRLLGKGTFAKVYYGKQLMTGESVAIK-VINKDQLKKEFMME---QIKREISVMRLVR 68
E + +GKG F V+ G+ + VAIK +I D + M+E + +RE+ +M +
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKV----------ARGRLREDLAR--KYFQ 116
HPN+V+L +M ++ ME+V G+L+ ++ + RL D+A +Y Q
Sbjct: 82 HPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN-DGLLHTQCGTP 175
+ H R + ++DF LS + + + GLL G
Sbjct: 140 NQNPPI--VH-RDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLL----GNF 190
Query: 176 AYVAPEVL--RKKGYDGSKADLWSCGVILYVLLAGFLPFQD 214
++APE + ++ Y KAD +S +ILY +L G PF +
Sbjct: 191 QWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 41/290 (14%)
Query: 1 MEEERHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMME 55
++ +HV+ G + ++G+G F VY+G L G+ + V + +++ +
Sbjct: 35 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS 94
Query: 56 QIKREISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY 114
Q E +M+ HPNV+ L + + ++ V + Y+K G+L R +R +
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPT 149
Query: 115 FQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL 167
+ LI + + S+ HR ++DFGL A +
Sbjct: 150 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYS 208
Query: 168 LHTQCGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
+H + G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++
Sbjct: 209 VHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 267
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + +RL+ DP + ++ W K RP
Sbjct: 268 LLQ------------GRRLLQPEYCPDPLYEVMLKC-----WHPKAEMRP 300
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 152
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 209
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 19 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 78
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 133
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ 171
I + + S+ HR ++DFGL A + +H +
Sbjct: 134 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNK 192
Query: 172 CGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKA 227
G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ + +
Sbjct: 193 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ- 250
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+RL+ DP + +M W K RP
Sbjct: 251 -----------GRRLLQPEYCPDP-----LYEVMLKCWHPKAEMRP 280
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 20 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 79
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 134
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ 171
I + + S+ HR ++DFGL A + +H +
Sbjct: 135 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNK 193
Query: 172 CGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKA 227
G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ + +
Sbjct: 194 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ- 251
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+RL+ DP + +M W K RP
Sbjct: 252 -----------GRRLLQPEYCPDP-----LYEVMLKCWHPKAEMRP 281
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 16 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 75
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 76 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 130
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ 171
I + + S+ HR ++DFGL A + +H +
Sbjct: 131 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNK 189
Query: 172 CGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKA 227
G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ + +
Sbjct: 190 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ- 247
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+RL+ DP + +M W K RP
Sbjct: 248 -----------GRRLLQPEYCPDP-----LYEVMLKCWHPKAEMRP 277
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
+LG+G F KVY G+ L G VA+K + +++ + + Q + E+ ++ + H N++ LR
Sbjct: 37 ILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGEL--QFQTEVEMISMAVHRNLLRLR 93
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGRL----------REDLARKYFQQLISAVDFCH 126
T + + Y+ G + A R R R+ +A + L D C
Sbjct: 94 GFCMTPTERLLVYPYMANGSV-ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 152
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ + HR + DFGL+ L + ++ + G ++APE L
Sbjct: 153 PK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDXHVXXAVRGXIGHIAPEYL-ST 209
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPFQDENIMN 219
G K D++ GV+L L+ G F + N
Sbjct: 210 GKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 90/222 (40%), Gaps = 23/222 (10%)
Query: 6 HVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMR 65
HV + +YE+ +++GKG F +V + VA+K++ + K F Q EI ++
Sbjct: 94 HVAY-RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNE---KRF-HRQAAEEIRILE 148
Query: 66 LVRHP------NVVELREVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQ 117
+R NV+ + E + I + E + EL K L RK+
Sbjct: 149 HLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 118 LISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXIS--DFGLSALPEQLRNDGLLHTQCGTP 175
++ +D H + H I DFG S Q ++ +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-----RVYXXIQSR 263
Query: 176 AYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGF--LPFQDE 215
Y APEV+ Y G D+WS G IL LL G+ LP +DE
Sbjct: 264 FYRAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 18 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 77
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 132
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ 171
I + + S+ HR ++DFGL A + +H +
Sbjct: 133 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNK 191
Query: 172 CGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKA 227
G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ + +
Sbjct: 192 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ- 249
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+RL+ DP + ++ W K RP
Sbjct: 250 -----------GRRLLQPEYCPDPLYEVMLKC-----WHPKAEMRP 279
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 5 RHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMMEQIKR 59
+HV+ G + ++G+G F VY+G L G+ + V + +++ + Q
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 60 EISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQL 118
E +M+ HPNV+ L + + ++ V + Y+K G+L R +R + + L
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL 135
Query: 119 IS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ 171
I + + S+ HR ++DFGL A + +H +
Sbjct: 136 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNK 194
Query: 172 CGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKA 227
G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++ + +
Sbjct: 195 TGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ- 252
Query: 228 EFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+RL+ DP + ++ W K RP
Sbjct: 253 -----------GRRLLQPEYCPDPLYEVMLKC-----WHPKAEMRP 282
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 25/205 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+GKG + +V+ G L GESVA+K+ + + F +I + L+RH N++
Sbjct: 16 VGKGRYGEVWRG--LWHGESVAVKIFSSRDEQSWFRETEIYNTV----LLRHDNILGFIA 69
Query: 78 VMATKK----KIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSR----- 128
T + ++++ Y + G L+ + R L LA + + H
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 129 ---GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN--DGLLHTQCGTPAYVAPEVL 183
++HR I+D GL+ + Q + D + + GT Y+APEVL
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 184 ----RKKGYDGSK-ADLWSCGVILY 203
R ++ K D+W+ G++L+
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLW 214
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 41/290 (14%)
Query: 1 MEEERHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMME 55
++ +HV+ G + ++G+G F VY+G L G+ + V + +++ +
Sbjct: 36 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS 95
Query: 56 QIKREISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY 114
Q E +M+ HPNV+ L + + ++ V + Y+K G+L R +R +
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPT 150
Query: 115 FQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL 167
+ LI + + S+ HR ++DFGL A +
Sbjct: 151 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYS 209
Query: 168 LHTQCGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
+H + G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++
Sbjct: 210 VHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 268
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + +RL+ DP + ++ W K RP
Sbjct: 269 LLQ------------GRRLLQPEYCPDPLYEVMLKC-----WHPKAEMRP 301
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 41/290 (14%)
Query: 1 MEEERHVLFGKYEM----GRLLGKGTFAKVYYGKQLMT-GESVAIKVINKDQLKKEFMME 55
++ +HV+ G + ++G+G F VY+G L G+ + V + +++ +
Sbjct: 9 VQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS 68
Query: 56 QIKREISVMRLVRHPNVVELREV-MATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY 114
Q E +M+ HPNV+ L + + ++ V + Y+K G+L R +R +
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPT 123
Query: 115 FQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL 167
+ LI + + S+ HR ++DFGL A +
Sbjct: 124 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYS 182
Query: 168 LHTQCGT--PA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
+H + G P ++A E L+ + + +K+D+WS GV+L+ L+ G P+ D N ++
Sbjct: 183 VHNKTGAKLPVKWMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 241
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + +RL+ DP + ++ W K RP
Sbjct: 242 LLQ------------GRRLLQPEYCPDPLYEVMLKC-----WHPKAEMRP 274
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G F +V+ G VA+K + + + +E E ++M+ ++H +V L
Sbjct: 21 LGAGQFGEVWMG-YYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLVRLYA 75
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR---GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ ++ I++ EY+ G L + G++ + Q+ + + + HR
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 135
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
I+DFGL+ + E N+ P + APE + G K+
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIED--NEYTAREGAKFPIKWTAPEAINF-GCFTIKS 192
Query: 194 DLWSCGVILY-VLLAGFLPF 212
D+WS G++LY ++ G +P+
Sbjct: 193 DVWSFGILLYEIVTYGKIPY 212
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 9/197 (4%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G V + +G +A K+I+ + K + QI RE+ V+ P +V
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 81
Query: 78 VMATKKKIFVAMEYVKGGELFAKVARG-RLREDLARKYFQQLISAVDFCHSRG-VSHRXX 135
+ +I + ME++ GG L + R+ E++ K ++ + + + + HR
Sbjct: 82 AFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV 141
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADL 195
+ DFG+S QL D + ++ GT +Y+APE L+ Y ++D+
Sbjct: 142 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMAPERLQGTHYS-VQSDI 196
Query: 196 WSCGVILYVLLAGFLPF 212
WS G+ L L G P
Sbjct: 197 WSMGLSLVELAVGRYPI 213
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 82
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 141
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 142 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 198
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 199 IDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 257
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 258 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 310
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 85
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 144
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 145 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 201
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 202 IDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 260
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 261 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 313
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 80
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 139
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 140 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA---RDINN 196
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 197 IDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 255
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 256 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 308
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 48/277 (17%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIK-VINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL- 75
LG+G F+ V + L G A+K ++ +Q +E + +RE + RL HPN++ L
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE----EAQREADMHRLFNHPNILRLV 92
Query: 76 ----REVMATKKKIFVAMEYVKGGELFAKVARGR-----LREDLARKYFQQLISAVDFCH 126
RE K + ++ + + K G L+ ++ R + L ED + ++ H
Sbjct: 93 AYCLRE-RGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 127 SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT--------------QC 172
++G +HR + D G N +H Q
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSM-------NQACIHVEGSRQALTLQDWAAQR 204
Query: 173 GTPAYVAPEVLRKKGYD--GSKADLWSCGVILYVLLAGFLP----FQDENIMNMYRKVFK 226
T +Y APE+ + + + D+WS G +LY ++ G P FQ + + + +
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL---AVQ 261
Query: 227 AEFVYP--PWISTDAKRLISKLLVSDPERRITIQSIM 261
+ P P S+ +L++ ++ DP +R I ++
Sbjct: 262 NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL 298
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 152
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 209
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 18 LGKGTFAKVY---YGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G F +V+ Y K VA+K + + E + E +VM+ ++H +V+
Sbjct: 23 LGAGQFGEVWMATYNKHT----KVAVKTMKPGSMSVEAFLA----EANVMKTLQHDKLVK 74
Query: 75 LREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLAR--KYFQQLISAVDFCHSRGV 130
L V+ TK+ I++ E++ G L F K G ++ L + + Q+ + F R
Sbjct: 75 LHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNY 132
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYD 189
HR I+DFGL+ + E N+ P + APE + +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIED--NEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 190 GSKADLWSCGVILY-VLLAGFLPF 212
K+D+WS G++L ++ G +P+
Sbjct: 191 -IKSDVWSFGILLMEIVTYGRIPY 213
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 98/261 (37%), Gaps = 57/261 (21%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
KY +G+ LG G+F V + +G+ A+K + +D K RE+ +M+++ H
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYK-------NRELDIMKVLDHV 60
Query: 71 NVVELREVMAT--------------------------------------KKKIFVAMEYV 92
N+++L + T K + V MEYV
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 93 KGGELFAKVARGRLRE------DLARKYFQQLISAVDFCHSRGVSHR-XXXXXXXXXXXX 145
+ KV + +R +L Y QL AV F HS G+ HR
Sbjct: 121 P--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD 178
Query: 146 XXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVL 205
+ DFG + + + ++ + C Y APE++ DLWS G + L
Sbjct: 179 NTLKLCDFGSAK--KLIPSEPSVAXICSR-FYRAPELMLGATEYTPSIDLWSIGCVFGEL 235
Query: 206 LAGFLPFQDENIMNMYRKVFK 226
+ G F E ++ ++ +
Sbjct: 236 ILGKPLFSGETSIDQLVRIIQ 256
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 18 LGKGTFAKVY---YGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G F +V+ Y K VA+K + + E + E +VM+ ++H +V+
Sbjct: 196 LGAGQFGEVWMATYNKHT----KVAVKTMKPGSMSVEAFLA----EANVMKTLQHDKLVK 247
Query: 75 LREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLAR--KYFQQLISAVDFCHSRGV 130
L V+ TK+ I++ E++ G L F K G ++ L + + Q+ + F R
Sbjct: 248 LHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNY 305
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTP-AYVAPEVLRKKGYD 189
HR I+DFGL+ + E N+ P + APE + +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIED--NEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 190 GSKADLWSCGVILY-VLLAGFLPF 212
K+D+WS G++L ++ G +P+
Sbjct: 364 -IKSDVWSFGILLMEIVTYGRIPY 386
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 152
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA---RDINN 209
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 107/277 (38%), Gaps = 35/277 (12%)
Query: 13 EMGRLLGKGTFAKVYYGKQLMTGES-----VAIKVINKDQLKKEFMMEQIKREISVM-RL 66
+ G+ LG G F KV G+ VA+K++ E E + E+ +M L
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHL 106
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR-------------LREDLARK 113
+H N+V L + V EY G+L + R R E L+ +
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 114 ----YFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG--L 167
+ Q+ + F S+ HR I DFGL+ + ND +
Sbjct: 167 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYI 223
Query: 168 LHTQCGTPA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVF 225
+ P ++APE + Y ++D+WS G++L+ + + G P+ + + + K+
Sbjct: 224 VKGNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 282
Query: 226 K--AEFVYPPWISTDAKRLISKLLVSDPERRITIQSI 260
K + P + + ++ +P R T Q I
Sbjct: 283 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 17/166 (10%)
Query: 59 REISVMRLVRHPNVVELREVMATK--------------KKIFVAMEYVKGGELFAKVARG 104
REI ++R + H N+V++ E++ +++ EY++ +L + +G
Sbjct: 57 REIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQG 115
Query: 105 RLREDLARKYFQQLISAVDFCHSRGVSHRXXXXXXX-XXXXXXXXXISDFGLSALPE-QL 162
L E+ AR + QL+ + + HS V HR I DFGL+ + +
Sbjct: 116 PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY 175
Query: 163 RNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAG 208
+ G L T Y +P +L D+W+ G I +L G
Sbjct: 176 SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 11 KYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMR 65
K + R LG+G+F VY G + ++ GE+ VA+K +N+ +E + + E SVM+
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMK 75
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARK--YFQQLI-- 119
+VV L V++ + V ME + G+L + + R + R Q++I
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 120 -----SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR-----NDGLLH 169
+ + +++ HR I DFG++ + GLL
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 170 TQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
+ ++APE L K G + +D+WS GV+L+
Sbjct: 196 VR-----WMAPESL-KDGVFTTSSDMWSFGVVLW 223
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 11 KYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMR 65
K + R LG+G+F VY G + ++ GE+ VA+K +N+ +E + + E SVM+
Sbjct: 15 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMK 72
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARK--YFQQLI-- 119
+VV L V++ + V ME + G+L + + R + R Q++I
Sbjct: 73 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 132
Query: 120 -----SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR-----NDGLLH 169
+ + +++ HR I DFG++ + GLL
Sbjct: 133 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 170 TQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
+ ++APE L K G + +D+WS GV+L+
Sbjct: 193 VR-----WMAPESL-KDGVFTTSSDMWSFGVVLW 220
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 11 KYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMR 65
K + R LG+G+F VY G + ++ GE+ VA+K +N+ +E + + E SVM+
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMK 75
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARK--YFQQLI-- 119
+VV L V++ + V ME + G+L + + R + R Q++I
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 120 -----SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR-----NDGLLH 169
+ + +++ HR I DFG++ + GLL
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 170 TQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
+ ++APE L K G + +D+WS GV+L+
Sbjct: 196 VR-----WMAPESL-KDGVFTTSSDMWSFGVVLW 223
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 115 FQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT---- 170
F Q+ AV+F HS+G+ HR + DFGL +Q + + T
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 171 ------QCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGF 209
Q GT Y++PE + Y K D++S G+IL+ LL F
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNY-SHKVDIFSLGLILFELLYSF 273
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
+E + +G+G F V+ K + + AIK I +E E++ RE+ + + HP
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLP--NRELAREKVMREVKALAKLEHPG 65
Query: 72 VV 73
+V
Sbjct: 66 IV 67
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 152
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 209
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 104/275 (37%), Gaps = 33/275 (12%)
Query: 13 EMGRLLGKGTFAKVYYGKQLMTGES-----VAIKVINKDQLKKEFMMEQIKREISVM-RL 66
+ G+ LG G F KV G+ VA+K++ E E + E+ +M L
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHL 106
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVDF 124
+H N+V L + V EY G+L + R L D A +S D
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 125 CH-------------SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG--LLH 169
H S+ HR I DFGL+ + ND ++
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVK 223
Query: 170 TQCGTPA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFK- 226
P ++APE + Y ++D+WS G++L+ + + G P+ + + + K+ K
Sbjct: 224 GNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 282
Query: 227 -AEFVYPPWISTDAKRLISKLLVSDPERRITIQSI 260
+ P + + ++ +P R T Q I
Sbjct: 283 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 139
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 198
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 255
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 256 IDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 314
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 315 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMR 65
K + R LG+G+F VY G + ++ GE+ VA+K +N+ +E + + E SVM+
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMK 75
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARK--YFQQLI-- 119
+VV L V++ + V ME + G+L + + R + R Q++I
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 120 -----SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND-------GL 167
+ + +++ HR I DFG++ + D GL
Sbjct: 136 AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGL 193
Query: 168 LHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
L + ++APE L K G + +D+WS GV+L+
Sbjct: 194 LPVR-----WMAPESL-KDGVFTTSSDMWSFGVVLW 223
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 38/226 (16%)
Query: 18 LGKGTFAKVYYGK-QLMTG--ESVAIKVINKDQLKKEFMMEQIKREISVMRLVR-HPNVV 73
+G+GTF+ VY QL G E +A+K L +I E+ + + NV+
Sbjct: 29 IGEGTFSSVYLATAQLQVGPEEKIALK-----HLIPTSHPIRIAAELQCLTVAGGQDNVM 83
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRGVSHR 133
++ + +AM Y++ + +E R+Y L A+ H G+ HR
Sbjct: 84 GVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE--VREYMLNLFKALKRIHQFGIVHR 141
Query: 134 XXXXXX-XXXXXXXXXXISDFGLSA------------LPEQLRNDGLLHTQC-------- 172
+ DFGL+ + + + + +C
Sbjct: 142 DVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQ 201
Query: 173 ------GTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGFLPF 212
GTP + APEVL K + D+WS GVI LL+G PF
Sbjct: 202 QVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMR 65
K + R LG+G+F VY G + ++ GE+ VA+K +N+ +E + + E SVM+
Sbjct: 19 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMK 76
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARK--YFQQLI-- 119
+VV L V++ + V ME + G+L + + R + R Q++I
Sbjct: 77 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 136
Query: 120 -----SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND-------GL 167
+ + +++ HR I DFG++ + D GL
Sbjct: 137 AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGL 194
Query: 168 LHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
L + ++APE L K G + +D+WS GV+L+
Sbjct: 195 LPVR-----WMAPESL-KDGVFTTSSDMWSFGVVLW 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMR 65
K + R LG+G+F VY G + ++ GE+ VA+K +N+ +E + + E SVM+
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMK 75
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARK--YFQQLI-- 119
+VV L V++ + V ME + G+L + + R + R Q++I
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 120 -----SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND-------GL 167
+ + +++ HR I DFG++ + D GL
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGL 193
Query: 168 LHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
L + ++APE L K G + +D+WS GV+L+
Sbjct: 194 LPVR-----WMAPESL-KDGVFTTSSDMWSFGVVLW 223
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L+ PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLMGGPN 87
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 145
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 146 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 200
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N+Y ++ E
Sbjct: 201 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 268 K 268
+
Sbjct: 320 Q 320
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 11 KYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMR 65
K + R LG+G+F VY G + ++ GE+ VA+K +N+ +E + + E SVM+
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMK 75
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARK--YFQQLI-- 119
+VV L V++ + V ME + G+L + + R + R Q++I
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 120 -----SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR-----NDGLLH 169
+ + +++ HR I DFG++ + GLL
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 170 TQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
+ ++APE L K G + +D+WS GV+L+
Sbjct: 196 VR-----WMAPESL-KDGVFTTSSDMWSFGVVLW 223
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L PN
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLCGGPN 89
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 90 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 147
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 148 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 202
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N+Y ++ E
Sbjct: 203 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 261
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 262 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 321
Query: 268 K 268
+
Sbjct: 322 Q 322
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 67/303 (22%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL-- 75
+GKG F +V+ GK GE VA+K+ + + + F +I + + ++RH N++
Sbjct: 17 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 70
Query: 76 --REVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSR----- 128
+ T ++++ +Y + G LF + R + + K S + H
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 129 ---GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT-------QCGTPAYV 178
++HR I+D GL+ +R+D T + GT Y+
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYM 185
Query: 179 APEVL----RKKGYDGSK-ADLWSCGVILYVL-----LAGF-----LPFQD----ENIMN 219
APEVL K ++ K AD+++ G++ + + + G LP+ D + +
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 245
Query: 220 MYRKVFKAEFVYPP----WISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVA 275
RKV + + P W S +A R+++K IMR W+ G R A
Sbjct: 246 EMRKVVCEQKLRPNIPNRWQSCEALRVMAK--------------IMRECWYANGAARLTA 291
Query: 276 FSI 278
I
Sbjct: 292 LRI 294
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 67/303 (22%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL-- 75
+GKG F +V+ GK GE VA+K+ + + + F +I + + ++RH N++
Sbjct: 12 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 65
Query: 76 --REVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSR----- 128
+ T ++++ +Y + G LF + R + + K S + H
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 129 ---GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT-------QCGTPAYV 178
++HR I+D GL+ +R+D T + GT Y+
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYM 180
Query: 179 APEVL----RKKGYDGSK-ADLWSCGVILYVL-----LAGF-----LPFQD----ENIMN 219
APEVL K ++ K AD+++ G++ + + + G LP+ D + +
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 240
Query: 220 MYRKVFKAEFVYPP----WISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVA 275
RKV + + P W S +A R+++K IMR W+ G R A
Sbjct: 241 EMRKVVCEQKLRPNIPNRWQSCEALRVMAK--------------IMRECWYANGAARLTA 286
Query: 276 FSI 278
I
Sbjct: 287 LRI 289
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +++ + + E+ +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEED--LSDLVSEMEM 93
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V +EY G L + R R + Y
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL-REYLRARRPPGMEYSYDINRVPEE 152
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 209
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 67/303 (22%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL-- 75
+GKG F +V+ GK GE VA+K+ + + + F +I + + ++RH N++
Sbjct: 11 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 64
Query: 76 --REVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSR----- 128
+ T ++++ +Y + G LF + R + + K S + H
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 129 ---GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT-------QCGTPAYV 178
++HR I+D GL+ +R+D T + GT Y+
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYM 179
Query: 179 APEVL----RKKGYDGSK-ADLWSCGVILYVL-----LAGF-----LPFQD----ENIMN 219
APEVL K ++ K AD+++ G++ + + + G LP+ D + +
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239
Query: 220 MYRKVFKAEFVYPP----WISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVA 275
RKV + + P W S +A R+++K IMR W+ G R A
Sbjct: 240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAK--------------IMRECWYANGAARLTA 285
Query: 276 FSI 278
I
Sbjct: 286 LRI 288
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 67/303 (22%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL-- 75
+GKG F +V+ GK GE VA+K+ + + + F +I + + ++RH N++
Sbjct: 37 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 90
Query: 76 --REVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSR----- 128
+ T ++++ +Y + G LF + R + + K S + H
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 129 ---GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT-------QCGTPAYV 178
++HR I+D GL+ +R+D T + GT Y+
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYM 205
Query: 179 APEVL----RKKGYDGSK-ADLWSCGVILYVL-----LAGF-----LPFQD----ENIMN 219
APEVL K ++ K AD+++ G++ + + + G LP+ D + +
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 265
Query: 220 MYRKVFKAEFVYPP----WISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVA 275
RKV + + P W S +A R+++K IMR W+ G R A
Sbjct: 266 EMRKVVCEQKLRPNIPNRWQSCEALRVMAK--------------IMRECWYANGAARLTA 311
Query: 276 FSI 278
I
Sbjct: 312 LRI 314
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L PN
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLCGGPN 88
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 89 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 146
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 147 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 201
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N+Y ++ E
Sbjct: 202 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 260
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 261 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 320
Query: 268 K 268
+
Sbjct: 321 Q 321
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 67/303 (22%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL-- 75
+GKG F +V+ GK GE VA+K+ + + + F +I + + ++RH N++
Sbjct: 14 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 67
Query: 76 --REVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSR----- 128
+ T ++++ +Y + G LF + R + + K S + H
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 129 ---GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT-------QCGTPAYV 178
++HR I+D GL+ +R+D T + GT Y+
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYM 182
Query: 179 APEVL----RKKGYDGSK-ADLWSCGVILYVL-----LAGF-----LPFQD----ENIMN 219
APEVL K ++ K AD+++ G++ + + + G LP+ D + +
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 242
Query: 220 MYRKVFKAEFVYPP----WISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVA 275
RKV + + P W S +A R+++K IMR W+ G R A
Sbjct: 243 EMRKVVCEQKLRPNIPNRWQSCEALRVMAK--------------IMRECWYANGAARLTA 288
Query: 276 FSI 278
I
Sbjct: 289 LRI 291
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLCGGPN 87
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 145
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 146 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 200
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N+Y ++ E
Sbjct: 201 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 268 K 268
+
Sbjct: 320 Q 320
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 11 KYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMR 65
K + R LG+G+F VY G + ++ GE+ VA+K +N+ +E + + E SVM+
Sbjct: 17 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMK 74
Query: 66 LVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARK--YFQQLI-- 119
+VV L V++ + V ME + G+L + + R + R Q++I
Sbjct: 75 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 134
Query: 120 -----SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND-------GL 167
+ + +++ HR I DFG++ + D GL
Sbjct: 135 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYRKGGKGL 192
Query: 168 LHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
L + ++APE L K G + +D+WS GV+L+
Sbjct: 193 LPVR-----WMAPESL-KDGVFTTSSDMWSFGVVLW 222
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 67/303 (22%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL-- 75
+GKG F +V+ GK GE VA+K+ + + + F +I + + ++RH N++
Sbjct: 50 IGKGRFGEVWRGK--WRGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENILGFIA 103
Query: 76 --REVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSR----- 128
+ T ++++ +Y + G LF + R + + K S + H
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 129 ---GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHT-------QCGTPAYV 178
++HR I+D GL+ +R+D T + GT Y+
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYM 218
Query: 179 APEVL----RKKGYDGSK-ADLWSCGVILYVL-----LAGF-----LPFQD----ENIMN 219
APEVL K ++ K AD+++ G++ + + + G LP+ D + +
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 278
Query: 220 MYRKVFKAEFVYPP----WISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRPVA 275
RKV + + P W S +A R+++K IMR W+ G R A
Sbjct: 279 EMRKVVCEQKLRPNIPNRWQSCEALRVMAK--------------IMRECWYANGAARLTA 324
Query: 276 FSI 278
I
Sbjct: 325 LRI 327
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLCGGPN 87
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 145
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 146 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 200
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N+Y ++ E
Sbjct: 201 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 268 K 268
+
Sbjct: 320 Q 320
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 103/275 (37%), Gaps = 33/275 (12%)
Query: 13 EMGRLLGKGTFAKVYYGKQLMTGES-----VAIKVINKDQLKKEFMMEQIKREISVM-RL 66
+ G+ LG G F KV G+ VA+K++ E E + E+ +M L
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHL 106
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVDF 124
+H N+V L + V EY G+L + R L D A S D
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 125 CH-------------SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDG--LLH 169
H S+ HR I DFGL+ + ND ++
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVK 223
Query: 170 TQCGTPA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFK- 226
P ++APE + Y ++D+WS G++L+ + + G P+ + + + K+ K
Sbjct: 224 GNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 282
Query: 227 -AEFVYPPWISTDAKRLISKLLVSDPERRITIQSI 260
+ P + + ++ +P R T Q I
Sbjct: 283 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGGPN 87
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 145
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 146 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 200
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N+Y ++ E
Sbjct: 201 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 268 K 268
+
Sbjct: 320 Q 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L PN
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGGPN 88
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 89 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 146
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 147 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 201
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N+Y ++ E
Sbjct: 202 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 260
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 261 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 320
Query: 268 K 268
+
Sbjct: 321 Q 321
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 113/271 (41%), Gaps = 51/271 (18%)
Query: 13 EMGRLLGKGTFAKVY----YGKQLMTGES--VAIKVINK--DQLKKEFMMEQIKREISVM 64
E G++LG G F KV YG TG S VA+K++ + D ++E +M ++K +
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGIS-KTGVSIQVAVKMLKEKADSSEREALMSELKM---MT 103
Query: 65 RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLR----------------- 107
+L H N+V L I++ EY G+L + R +
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 108 EDLARKYFQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPE 160
EDL F+ L+ ++F + HR I DFGL+
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA---R 220
Query: 161 QLRNDG--LLHTQCGTPA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQ--- 213
+ +D ++ P ++APE L + Y K+D+WS G++L+ + + G P+
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYT-IKSDVWSYGILLWEIFSLGVNPYPGIP 279
Query: 214 -DENIMNMYRKVFKAEFVYPPWISTDAKRLI 243
D N + + FK + P+ +T+ +I
Sbjct: 280 VDANFYKLIQNGFKMD---QPFYATEEIYII 307
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGGPN 87
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 145
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 146 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 200
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N+Y ++ E
Sbjct: 201 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 268 K 268
+
Sbjct: 320 Q 320
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 108/284 (38%), Gaps = 42/284 (14%)
Query: 13 EMGRLLGKGTFAKVYYGKQLMTGES-----VAIKVINKDQLKKEFMMEQIKREISVM-RL 66
+ G+ LG G F KV G+ VA+K++ E E + E+ +M L
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHL 91
Query: 67 VRHPNVVELREVMATKKKIFVAMEYVKGGELF------------AKVARGRLREDLARK- 113
+H N+V L + V EY G+L +A G+ E L ++
Sbjct: 92 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 114 -----------YFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL 162
+ Q+ + F S+ HR I DFGL+ +
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDI 208
Query: 163 RNDG--LLHTQCGTPA-YVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIM 218
ND ++ P ++APE + Y ++D+WS G++L+ + + G P+ +
Sbjct: 209 MNDSNYIVKGNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVN 267
Query: 219 NMYRKVFKA--EFVYPPWISTDAKRLISKLLVSDPERRITIQSI 260
+ + K+ K + P + + ++ +P R T Q I
Sbjct: 268 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGGPN 87
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 145
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 146 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 200
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N+Y ++ E
Sbjct: 201 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIEL 259
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 260 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 319
Query: 268 K 268
+
Sbjct: 320 Q 320
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 88/226 (38%), Gaps = 35/226 (15%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ L+G+G++ VY ++VAIK +N+ + ++I REI+++ ++
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR-MFEDLIDCKRILREITILNRLKSDY 88
Query: 72 VVELREVMATK-----KKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDF 124
++ L +++ + ++++ +E +LF L E + L+ F
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI--FLTEQHVKTILYNLLLGEKF 146
Query: 125 CHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSAL-----------------------PEQ 161
H G+ HR I DFGL+ P
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 162 LRNDGLLHTQCGTPAYVAPE-VLRKKGYDGSKADLWSCGVILYVLL 206
L + T Y APE +L ++ Y S D+WS G I LL
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNS-IDIWSTGCIFAELL 251
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGES-------VAIKVINKDQLKKEFMMEQIKREISVMRL 66
+G+ LG+G F +V + + + VA+K++ D +K+ + + E+ +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKM 89
Query: 67 V-RHPNVVELREVMATKKKIFVAMEYVKGGEL-------------FAKVARGRLREDLAR 112
+ +H N++ L ++V +EY G L F+ E L+
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 113 KYF----QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLL 168
K Q+ +++ S+ HR I+DFGL+ + D
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DXXK 207
Query: 169 HTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVF 225
T G P ++APE L + Y ++D+WS GV+L+ + G P+ + +++ +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 226 KAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
+ + P W + ++R K LV D +R + + S
Sbjct: 267 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 314
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 123/293 (41%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V + Y G L + R R + Y
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL-REYLRARRPPGMEYSYDINRVPEE 152
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 209
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 91/223 (40%), Gaps = 32/223 (14%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y + L+G+G++ VY T ++VAIK +N+ + ++I REI+++ ++
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR-MFEDLIDCKRILREITILNRLKSDY 86
Query: 72 VVELREVMATK-----KKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAVDF 124
++ L +++ ++++ +E +LF L E+ + L+ +F
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENF 144
Query: 125 CHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGL----------------- 167
H G+ HR + DFGL+ ++ +
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 168 ---LHTQCGTPAYVAPE-VLRKKGYDGSKADLWSCGVILYVLL 206
L + T Y APE +L ++ Y S D+WS G I LL
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKS-IDIWSTGCIFAELL 246
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 121/301 (40%), Gaps = 57/301 (18%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
YE+ R +G+G +++V+ G + E IK LK + + + L PN
Sbjct: 54 YEVVRKVGRGKYSEVFEGINVNNNEKCIIK-----ILKPVKKKKIKREIKILQNLXGGPN 108
Query: 72 VVELREVMATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
+V+L +++ + K + EYV + KV L + R Y +L+ A+D+CHS+G
Sbjct: 109 IVKLLDIVRDQHSKTPSLIFEYVNNTDF--KVLYPTLTDYDIRYYIYELLKALDYCHSQG 166
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRK- 185
+ HR + D+GL+ P + N + + + PE+L
Sbjct: 167 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-----VRVASRYFKGPELLVDL 221
Query: 186 KGYDGSKADLWSCGVILYVLLAGFLPF------QDENI----------MNMYRKVFKAEF 229
+ YD S D+WS G + ++ PF D+ + +N Y ++ E
Sbjct: 222 QDYDYS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIEL 280
Query: 230 -----------VYPPW-----------ISTDAKRLISKLLVSDPERRITIQSIMRVPWFR 267
PW +S +A + KLL D + R+T M P+F+
Sbjct: 281 DPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQ 340
Query: 268 K 268
+
Sbjct: 341 Q 341
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 55/289 (19%)
Query: 14 MGRLLGKGTFAKV-----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
+G+ LG+G F KV ++ K +VA+K++ ++ E + + E +V++ V
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LRDLLSEFNVLKQVN 84
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLRE-------------------- 108
HP+V++L + + + +EY K G L RG LRE
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSL-----RGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 109 -----------DLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSA 157
DL + Q+ + + + HR ISDFGLS
Sbjct: 140 DHPDERALTMGDLI-SFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 158 LPEQLRNDGLL-HTQCGTPA-YVAPEVLRKKGYDGSKADLWSCGVILY--VLLAG--FLP 211
+ D + +Q P ++A E L Y +++D+WS GV+L+ V L G +
Sbjct: 199 --DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 212 FQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSI 260
E + N+ + + E P S + RL+ + +P++R I
Sbjct: 256 IPPERLFNLLKTGHRME--RPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 15/257 (5%)
Query: 16 RLLGKGTFAKVYYGKQLMTGES---VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNV 72
R++GKG F VY+G+ + ++ AIK +++ + + +E RE +MR + HPNV
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR--ITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 73 VELREVMATKKKI-FVAMEYVKGGELFAKV---ARGRLREDLARKYFQQLISAVDFCHSR 128
+ L +M + + V + Y+ G+L + R +DL + Q+ +++ +
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLI-SFGLQVARGMEYLAEQ 143
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLS-ALPEQLRNDGLLHTQCGTPA-YVAPEVLRKK 186
HR ++DFGL+ + ++ H P + A E L+
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 187 GYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAEFVYPPWISTDA-KRLIS 244
+ +K+D+WS GV+L+ LL G P++ + ++ + + + P D+ +++
Sbjct: 204 RFT-TKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQ 262
Query: 245 KLLVSDPERRITIQSIM 261
+ +DP R T + ++
Sbjct: 263 QCWEADPAVRPTFRVLV 279
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 53/291 (18%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGES-------VAIKVINKDQLKKEFMMEQIKREISVMRL 66
+G+ LG+G F +V + + + VA+K++ D +K+ + + E+ +M++
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKM 130
Query: 67 V-RHPNVVELREVMATKKKIFVAMEYVKGGEL-------------FAKVARGRLREDLAR 112
+ +H N++ L ++V +EY G L ++ E L+
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 113 KYF----QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL-----R 163
K Q+ +++ S+ HR I+DFGL+ +
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 164 NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYR 222
+G L + ++APE L + Y ++D+WS GV+L+ + G P+ + +++
Sbjct: 251 TNGRLPVK-----WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304
Query: 223 KVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
+ + + P W + ++R K LV D +R + + S
Sbjct: 305 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 22/252 (8%)
Query: 16 RLLGKGTFAKVYYGKQLMTGES----VAIKVINKDQLKK---EFMMEQIKREISVMRLVR 68
++LG G F VY G + GE+ VAIK++N+ K EFM E + +M +
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL-----IMASMD 75
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHS 127
HP++V L V + V G L + + + L + Q+ + +
Sbjct: 76 HPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 135
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG--TPA-YVAPEVLR 184
R + HR I+DFGL+ L L D + G P ++A E +
Sbjct: 136 RRLVHRDLAARNVLVKSPNHVKITDFGLARL---LEGDEKEYNADGGKMPIKWMALECIH 192
Query: 185 KKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRL 242
+ + ++D+WS GV ++ L+ G P+ + + K E PP + D +
Sbjct: 193 YRKFT-HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV 251
Query: 243 ISKLLVSDPERR 254
+ K + D + R
Sbjct: 252 MVKCWMIDADSR 263
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 14 MGRLLGKGTFAKVYYGKQL-MTGE--SVAIKVINKDQL---KKEFMMEQIKREISVMRLV 67
+ R+LG+G F +VY G GE +VA+K KD K++FM E + +M+ +
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-----IMKNL 66
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVDFC 125
HP++V+L ++ ++ ++ ME GEL + R + L+ Y Q+ A+ +
Sbjct: 67 DHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLR 184
S HR + DFGLS E D + P +++PE +
Sbjct: 126 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKWMSPESIN 183
Query: 185 KKGYDGSKADLWSCGVILYVLLA-GFLPF 212
+ + + +D+W V ++ +L+ G PF
Sbjct: 184 FRRF-TTASDVWMFAVCMWEILSFGKQPF 211
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 123/293 (41%), Gaps = 51/293 (17%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGE-------SVAIKVINKDQLKKEFMMEQIKREISV 63
K +G+ LG+G F +V + + + +VA+K++ D +K+ + + E+ +
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 64 MRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKY-------- 114
M+++ +H N++ L ++V + Y G L + R R + Y
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL-REYLRARRPPGMEYSYDINRVPEE 152
Query: 115 ---FQQLISA-------VDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN 164
F+ L+S +++ S+ HR I+DFGL+ + N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINN 209
Query: 165 -DGLLHTQCG-TPA-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNM 220
D T G P ++APE L + Y ++D+WS GV+++ + G P+ + +
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268
Query: 221 YRKVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
++ + + + P W + ++R K LV D +R +T+ +
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Query: 18 LGKGTFAKVYYGKQLMTGES-VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G +V+ G G + VA+K + + + + + E ++M+ ++H +V L
Sbjct: 21 LGAGQAGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 74
Query: 77 EVMATKKKIFVAMEYVKGGEL--FAKVARG-RLREDLARKYFQQLISAVDFCHSRGVSHR 133
V+ T++ I++ EY++ G L F K G +L + Q+ + F R HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKA 193
I+DFGL+ L E + + APE + G K+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAI-NYGTFTIKS 191
Query: 194 DLWSCGVILY-VLLAGFLPF----QDENIMNMYR 222
D+WS G++L ++ G +P+ E I N+ R
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 104/252 (41%), Gaps = 22/252 (8%)
Query: 16 RLLGKGTFAKVYYGKQLMTGES----VAIKVINKDQLKK---EFMMEQIKREISVMRLVR 68
++LG G F VY G + GE+ VAIK++N+ K EFM E + +M +
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL-----IMASMD 98
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHS 127
HP++V L V + V G L + + + L + Q+ + +
Sbjct: 99 HPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 158
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG--TPA-YVAPEVLR 184
R + HR I+DFGL+ L L D + G P ++A E +
Sbjct: 159 RRLVHRDLAARNVLVKSPNHVKITDFGLARL---LEGDEKEYNADGGKMPIKWMALECIH 215
Query: 185 KKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRL 242
+ + ++D+WS GV ++ L+ G P+ + + K E PP + D +
Sbjct: 216 YRKFT-HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV 274
Query: 243 ISKLLVSDPERR 254
+ K + D + R
Sbjct: 275 MVKCWMIDADSR 286
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 14 MGRLLGKGTFAKVYYGKQL-MTGE--SVAIKVINKDQL---KKEFMMEQIKREISVMRLV 67
+ R+LG+G F +VY G GE +VA+K KD K++FM E + +M+ +
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-----IMKNL 82
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVDFC 125
HP++V+L ++ ++ ++ ME GEL + R + L+ Y Q+ A+ +
Sbjct: 83 DHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLR 184
S HR + DFGLS E D + P +++PE +
Sbjct: 142 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKWMSPESIN 199
Query: 185 KKGYDGSKADLWSCGVILYVLLA-GFLPF 212
+ + + +D+W V ++ +L+ G PF
Sbjct: 200 FRRF-TTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 53/291 (18%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGES-------VAIKVINKDQLKKEFMMEQIKREISVMRL 66
+G+ LG+G F +V + + + VA+K++ D +K+ + + E+ +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKM 89
Query: 67 V-RHPNVVELREVMATKKKIFVAMEYVKGGEL-------------FAKVARGRLREDLAR 112
+ +H N++ L ++V +EY G L ++ E L+
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 113 KYF----QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL-----R 163
K Q+ +++ S+ HR I+DFGL+ +
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 164 NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYR 222
+G L + ++APE L + Y ++D+WS GV+L+ + G P+ + +++
Sbjct: 210 TNGRLPVK-----WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
Query: 223 KVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
+ + + P W + ++R K LV D +R + + S
Sbjct: 264 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 314
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 14 MGRLLGKGTFAKVYYGKQL-MTGE--SVAIKVINKDQL---KKEFMMEQIKREISVMRLV 67
+ R+LG+G F +VY G GE +VA+K KD K++FM E + +M+ +
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-----IMKNL 70
Query: 68 RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGR--LREDLARKYFQQLISAVDFC 125
HP++V+L ++ ++ ++ ME GEL + R + L+ Y Q+ A+ +
Sbjct: 71 DHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 126 HSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLR 184
S HR + DFGLS E D + P +++PE +
Sbjct: 130 ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKWMSPESIN 187
Query: 185 KKGYDGSKADLWSCGVILYVLLA-GFLPF 212
+ + + +D+W V ++ +L+ G PF
Sbjct: 188 FRRF-TTASDVWMFAVCMWEILSFGKQPF 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 30/203 (14%)
Query: 18 LGKGTFAKVY---YGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G F +V+ Y K VA+K + + E + E +VM+ ++H +V+
Sbjct: 190 LGAGQFGEVWMATYNKHT----KVAVKTMKPGSMSVEAFLA----EANVMKTLQHDKLVK 241
Query: 75 LREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLAR--KYFQQLISAVDFCHSRGV 130
L V+ TK+ I++ E++ G L F K G ++ L + + Q+ + F R
Sbjct: 242 LHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQRNY 299
Query: 131 SHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDG 190
HR I+DFGL+ + + + APE + +
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGAKF-----------PIKWTAPEAINFGSFT- 347
Query: 191 SKADLWSCGVILY-VLLAGFLPF 212
K+D+WS G++L ++ G +P+
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPY 370
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 53/291 (18%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGES-------VAIKVINKDQLKKEFMMEQIKREISVMRL 66
+G+ LG+G F +V + + + VA+K++ D +K+ + + E+ +M++
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKM 78
Query: 67 V-RHPNVVELREVMATKKKIFVAMEYVKGGEL-------------FAKVARGRLREDLAR 112
+ +H N++ L ++V +EY G L ++ E L+
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 113 KYF----QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL-----R 163
K Q+ +++ S+ HR I+DFGL+ +
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 164 NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYR 222
+G L + ++APE L + Y ++D+WS GV+L+ + G P+ + +++
Sbjct: 199 TNGRLPVK-----WMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 252
Query: 223 KVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
+ + + P W + ++R K LV D +R + + S
Sbjct: 253 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 303
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 53/291 (18%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGES-------VAIKVINKDQLKKEFMMEQIKREISVMRL 66
+G+ LG+G F +V + + + VA+K++ D +K+ + + E+ +M++
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKM 81
Query: 67 V-RHPNVVELREVMATKKKIFVAMEYVKGGEL-------------FAKVARGRLREDLAR 112
+ +H N++ L ++V +EY G L ++ E L+
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 113 KYF----QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL-----R 163
K Q+ +++ S+ HR I+DFGL+ +
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 164 NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYR 222
+G L + ++APE L + Y ++D+WS GV+L+ + G P+ + +++
Sbjct: 202 TNGRLPVK-----WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 255
Query: 223 KVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
+ + + P W + ++R K LV D +R + + S
Sbjct: 256 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 306
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 53/291 (18%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGES-------VAIKVINKDQLKKEFMMEQIKREISVMRL 66
+G+ LG+G F +V + + + VA+K++ D +K+ + + E+ +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKM 89
Query: 67 V-RHPNVVELREVMATKKKIFVAMEYVKGGEL-------------FAKVARGRLREDLAR 112
+ +H N++ L ++V +EY G L ++ E L+
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 113 KYF----QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL-----R 163
K Q+ +++ S+ HR I+DFGL+ +
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 164 NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYR 222
+G L + ++APE L + Y ++D+WS GV+L+ + G P+ + +++
Sbjct: 210 TNGRLPVK-----WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
Query: 223 KVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
+ + + P W + ++R K LV D +R + + S
Sbjct: 264 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 314
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
LG G F +V+ G VA+K + + + +E E ++M+ ++H +V L
Sbjct: 20 LGAGQFGEVWMG-YYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLVRLYA 74
Query: 78 VMATKKKIFVAMEYVKGGELFAKVAR---GRLREDLARKYFQQLISAVDFCHSRGVSHRX 134
V+ ++ I++ E++ G L + G++ + Q+ + + + HR
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 134
Query: 135 XXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKA 193
I+DFGL+ + E N+ P + APE + G K+
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIED--NEYTAREGAKFPIKWTAPEAINF-GCFTIKS 191
Query: 194 DLWSCGVILY-VLLAGFLPF 212
++WS G++LY ++ G +P+
Sbjct: 192 NVWSFGILLYEIVTYGKIPY 211
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 53/291 (18%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGES-------VAIKVINKDQLKKEFMMEQIKREISVMRL 66
+G+ LG+G F +V + + + VA+K++ D +K+ + + E+ +M++
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKM 82
Query: 67 V-RHPNVVELREVMATKKKIFVAMEYVKGGEL-------------FAKVARGRLREDLAR 112
+ +H N++ L ++V +EY G L ++ E L+
Sbjct: 83 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 113 KYF----QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL-----R 163
K Q+ +++ S+ HR I+DFGL+ +
Sbjct: 143 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 164 NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYR 222
+G L + ++APE L + Y ++D+WS GV+L+ + G P+ + +++
Sbjct: 203 TNGRLPVK-----WMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 256
Query: 223 KVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
+ + + P W + ++R K LV D +R + + S
Sbjct: 257 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 307
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 13/206 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGES-----VAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+++G G F +VY G L T VAIK + +K+ + E +M H
Sbjct: 50 KVIGAGEFGEVYKG-MLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMGQFSHH 106
Query: 71 NVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLREDLARKYFQQLISAVDFCHSR 128
N++ L V++ K + + EY++ G L F + G + + + + + +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 129 GVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKG 187
HR +SDFGLS + E + P + APE + +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 188 YDGSKADLWSCGVILY-VLLAGFLPF 212
+ S +D+WS G++++ V+ G P+
Sbjct: 227 FT-SASDVWSFGIVMWEVMTYGERPY 251
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 55/289 (19%)
Query: 14 MGRLLGKGTFAKV-----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
+G+ LG+G F KV ++ K +VA+K++ ++ E + + E +V++ V
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LRDLLSEFNVLKQVN 84
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLRE-------------------- 108
HP+V++L + + + +EY K G L RG LRE
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSL-----RGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 109 -----------DLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSA 157
DL + Q+ + + + HR ISDFGLS
Sbjct: 140 DHPDERALTMGDLI-SFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 158 LPEQLRNDGLL-HTQCGTPA-YVAPEVLRKKGYDGSKADLWSCGVILY--VLLAG--FLP 211
+ D + +Q P ++A E L Y +++D+WS GV+L+ V L G +
Sbjct: 199 --DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 212 FQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSI 260
E + N+ + + E P S + RL+ + +P++R I
Sbjct: 256 IPPERLFNLLKTGHRME--RPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 55/289 (19%)
Query: 14 MGRLLGKGTFAKV-----YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
+G+ LG+G F KV ++ K +VA+K++ ++ E + + E +V++ V
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE--LRDLLSEFNVLKQVN 84
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLRE-------------------- 108
HP+V++L + + + +EY K G L RG LRE
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSL-----RGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 109 -----------DLARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSA 157
DL + Q+ + + + HR ISDFGLS
Sbjct: 140 DHPDERALTMGDLI-SFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 158 LPEQLRNDGLL-HTQCGTPA-YVAPEVLRKKGYDGSKADLWSCGVILY--VLLAG--FLP 211
+ D + +Q P ++A E L Y +++D+WS GV+L+ V L G +
Sbjct: 199 --DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 212 FQDENIMNMYRKVFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSI 260
E + N+ + + E P S + RL+ + +P++R I
Sbjct: 256 IPPERLFNLLKTGHRME--RPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 117/291 (40%), Gaps = 53/291 (18%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGES-------VAIKVINKDQLKKEFMMEQIKREISVMRL 66
+G+ LG+G F +V + + + VA+K++ D +K+ + + E+ +M++
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKM 74
Query: 67 V-RHPNVVELREVMATKKKIFVAMEYVKGGEL-------------FAKVARGRLREDLAR 112
+ +H N++ L ++V +EY G L + E L+
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 113 KYF----QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL-----R 163
K Q+ +++ S+ HR I+DFGL+ +
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 164 NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYR 222
+G L + ++APE L + Y ++D+WS GV+L+ + G P+ + +++
Sbjct: 195 TNGRLPVK-----WMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 248
Query: 223 KVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
+ + + P W + ++R K LV D +R + + S
Sbjct: 249 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 299
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 28/271 (10%)
Query: 14 MGRLLGKGTFAKVYYG---KQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+G++LG+G F V G ++ T VA+K + D + +E+ E + M+ HP
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDFSHP 96
Query: 71 NVVELREV---MATK--KKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLIS----- 120
NV+ L V M+++ K V + ++K G+L + RL Q L+
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 121 --AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ---CGTP 175
+++ +R HR ++DFGLS + G + Q P
Sbjct: 157 ALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS----KKIYSGDYYRQGRIAKMP 212
Query: 176 A-YVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYRKVFKAEFVYPP 233
++A E L + Y SK+D+W+ GV ++ + G P+ MY + + P
Sbjct: 213 VKWIAIESLADRVYT-SKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQP 271
Query: 234 WISTD-AKRLISKLLVSDPERRITIQSIMRV 263
D ++ +DP R T S++R+
Sbjct: 272 EDCLDELYEIMYSCWRTDPLDRPTF-SVLRL 301
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 82 RLLGICLT-STVQLIMQLMPFGXLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFGL+ L + H + G P ++A E + +
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 196
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 197 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 255
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 256 CWMIDADSR 264
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 117/291 (40%), Gaps = 53/291 (18%)
Query: 14 MGRLLGKGTFAKVYYGKQLMTGES-------VAIKVINKDQLKKEFMMEQIKREISVMRL 66
+G+ LG+G F +V + + + VA+K++ D +K+ + + E+ +M++
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKM 89
Query: 67 V-RHPNVVELREVMATKKKIFVAMEYVKGGEL-------------FAKVARGRLREDLAR 112
+ +H N++ L ++V +EY G L + E L+
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 113 KYF----QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL-----R 163
K Q+ +++ S+ HR I+DFGL+ +
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 164 NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLPFQDENIMNMYR 222
+G L + ++APE L + Y ++D+WS GV+L+ + G P+ + +++
Sbjct: 210 TNGRLPVK-----WMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
Query: 223 KVFKAEFVYPP--------------WISTDAKRLISKLLVSDPERRITIQS 259
+ + + P W + ++R K LV D +R + + S
Sbjct: 264 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 314
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 22/243 (9%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ L+GKG+F +V + E VAIK+I KK F + Q + E+ ++ L+
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAF-LNQAQIEVRLLELMNKH 91
Query: 71 N------VVELREVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAV 122
+ +V L+ + + + E + +L + +L RK+ QQ+ +A+
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 123 DFCHSRGVS----HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
F + +S I DFG S Q ++ + Y
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQXIQSRFYR 206
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTD 238
+PEVL YD + D+WS G IL + G F N ++ K+ + + P I
Sbjct: 207 SPEVLLGMPYDLA-IDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQ 265
Query: 239 AKR 241
A +
Sbjct: 266 APK 268
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 22/243 (9%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ L+GKG+F +V + E VAIK+I KK F + Q + E+ ++ L+
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAF-LNQAQIEVRLLELMNKH 110
Query: 71 N------VVELREVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAV 122
+ +V L+ + + + E + +L + +L RK+ QQ+ +A+
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 123 DFCHSRGVS----HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
F + +S I DFG S Q ++ + Y
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQXIQSRFYR 225
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTD 238
+PEVL YD + D+WS G IL + G F N ++ K+ + + P I
Sbjct: 226 SPEVLLGMPYDLA-IDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQ 284
Query: 239 AKR 241
A +
Sbjct: 285 APK 287
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 174 TPAYVAPEVLRKKGYDGSK--ADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEF-- 229
PA+VAPE L+KK D ++ AD WS V+L+ L+ +PF D + + KV
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRP 230
Query: 230 VYPPWISTDAKRLISKLLVSDPERRITIQSIMRV 263
PP IS +L DP +R I+ +
Sbjct: 231 TIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPI 264
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 22/243 (9%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHP 70
+YE+ L+GKG+F +V + E VAIK+I KK F + Q + E+ ++ L+
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAF-LNQAQIEVRLLELMNKH 110
Query: 71 N------VVELREVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKYFQQLISAV 122
+ +V L+ + + + E + +L + +L RK+ QQ+ +A+
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 123 DFCHSRGVS----HRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYV 178
F + +S I DFG S Q ++ + Y
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ-----RIYQXIQSRFYR 225
Query: 179 APEVLRKKGYDGSKADLWSCGVILYVLLAGFLPFQDENIMNMYRKVFKAEFVYPPWISTD 238
+PEVL YD + D+WS G IL + G F N ++ K+ + + P I
Sbjct: 226 SPEVLLGMPYDLA-IDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQ 284
Query: 239 AKR 241
A +
Sbjct: 285 APK 287
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 85 RLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFGL+ L + H + G P ++A E + +
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 199
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 200 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 258
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 259 CWMIDADSR 267
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 84 RLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFGL+ L + H + G P ++A E + +
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 198
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 199 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 257
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 258 CWMIDADSR 266
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 83 RLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFGL+ L + H + G P ++A E + +
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 197
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 198 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 256
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 257 CWMIDADSR 265
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 75
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 193
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 194 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 231
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 82 RLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFGL+ L + H + G P ++A E + +
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 196
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 197 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 255
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 256 CWMIDADSR 264
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 81 RLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFGL+ L + H + G P ++A E + +
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 195
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 196 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 254
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 255 CWMIDADSR 263
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 69
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR--- 163
++I + + ++ HR I DFG++ +
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 164 --NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 190 KGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 225
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 60
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 61 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLR--- 163
++I + + ++ HR I DFG++ +
Sbjct: 121 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 164 --NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 181 KGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 216
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 68
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 186
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 187 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 224
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 66
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 67 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 127 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 184
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 185 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 222
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 62
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 180
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 181 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 218
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 69
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 187
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 188 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 225
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 68
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 186
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 187 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 224
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 62
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDY 180
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 181 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 218
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGES----VAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
++LG G F VY G + GE+ VAIKV+ ++ K ++I E VM V P
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKA--NKEILDEAYVMAGVGSPY 80
Query: 72 VVELREVMATKKKIFVAMEYVKGGELFAKV--ARGRLREDLARKYFQQLISAVDFCHSRG 129
V L + T V + + G L V RGRL + Q+ + +
Sbjct: 81 VSRLLGICLTSTVQLVT-QLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFGL+ L + ++ H G P ++A E + ++
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDI--DETEYHADGGKVPIKWMALESILRRR 197
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
+ ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 198 FT-HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVK 256
Query: 246 LLVSDPERR 254
+ D E R
Sbjct: 257 CWMIDSECR 265
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 97
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 98 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 158 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 215
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 216 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 253
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 75
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 193
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 194 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 231
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 126/328 (38%), Gaps = 67/328 (20%)
Query: 2 EEERHVLFGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREI 61
E ER +YE G +G+GT+ VY K+ + + Q++ + REI
Sbjct: 14 ERERVEDLFEYE-GCKVGRGTYGHVYKAKRKDGKDDKDYAL---KQIEGTGISMSACREI 69
Query: 62 SVMRLVRHPNVVELREVMATK--KKIFVAMEYVKGGEL----FAKVARG-----RLREDL 110
+++R ++HPNV+ L++V + +K+++ +Y + F + ++ +L +
Sbjct: 70 ALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGM 129
Query: 111 ARKYFQQLISAVDFCHSRGVSHRXXXXXXXXXX----XXXXXXISDFGLSAL-PEQLRND 165
+ Q++ + + H+ V HR I+D G + L L+
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 166 GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLA------------------ 207
L T Y APE+L + D+W+ G I LL
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 249
Query: 208 ------------GFLPFQD-ENI--------------MNMYRKVFKAEFVYPPWISTDAK 240
GF +D E+I N Y +++ + D+K
Sbjct: 250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSK 309
Query: 241 --RLISKLLVSDPERRITIQSIMRVPWF 266
L+ KLL DP +RIT + M+ P+F
Sbjct: 310 AFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 41/251 (16%)
Query: 18 LGKGTFAKVYYGKQLMTG-----ESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNV 72
LG+ F KVY G ++VAIK + KD+ + + E+ + E + ++HPNV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGP-LREEFRHEAMLRARLQHPNV 74
Query: 73 VELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR-----------------KYF 115
V L V+ + + + Y G+L + D+
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGL-----SALPEQLRNDGLLHT 170
Q+ + +++ S V H+ ISD GL +A +L + LL
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 194
Query: 171 QCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLP---FQDENIMNMY--RKV 224
+ ++APE + G +D+WS GV+L+ V G P + +++++ M R+V
Sbjct: 195 R-----WMAPEAI-MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 248
Query: 225 FKAEFVYPPWI 235
P W+
Sbjct: 249 LPCPDDCPAWV 259
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 41/251 (16%)
Query: 18 LGKGTFAKVYYGKQLMTG-----ESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNV 72
LG+ F KVY G ++VAIK + KD+ + + E+ + E + ++HPNV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGP-LREEFRHEAMLRARLQHPNV 91
Query: 73 VELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLAR-----------------KYF 115
V L V+ + + + Y G+L + D+
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 116 QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGL-----SALPEQLRNDGLLHT 170
Q+ + +++ S V H+ ISD GL +A +L + LL
Sbjct: 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI 211
Query: 171 QCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY-VLLAGFLP---FQDENIMNMY--RKV 224
+ ++APE + G +D+WS GV+L+ V G P + +++++ M R+V
Sbjct: 212 R-----WMAPEAI-MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 265
Query: 225 FKAEFVYPPWI 235
P W+
Sbjct: 266 LPCPDDCPAWV 276
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+GKG + +V+ G GE+VA+K+ + K F ++ + ++RH N++
Sbjct: 16 VGKGRYGEVWRGS--WQGENVAVKIFSSRDEKSWFRETELYNTV----MLRHENILGFIA 69
Query: 78 VMATKK----KIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCH------- 126
T + ++++ Y + G L+ + L + + S + H
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 127 -SRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN--DGLLHTQCGTPAYVAPEVL 183
++HR I+D GL+ + Q N D + + GT Y+APEVL
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 184 RKK----GYDGSK-ADLWSCGVILY 203
+ +D K D+W+ G++L+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLW 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+GKG + +V+ G GE+VA+K+ + K F ++ + ++RH N++
Sbjct: 16 VGKGRYGEVWRGS--WQGENVAVKIFSSRDEKSWFRETELYNTV----MLRHENILGFIA 69
Query: 78 VMATKK----KIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCH-----SR 128
T + ++++ Y + G L+ + L + + S + H ++
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 129 G---VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN--DGLLHTQCGTPAYVAPEVL 183
G ++HR I+D GL+ + Q N D + + GT Y+APEVL
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 184 RKK----GYDGSK-ADLWSCGVILY 203
+ +D K D+W+ G++L+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLW 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 106 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 165
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 166 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 222
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 223 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 282
Query: 249 SDPERR 254
D + R
Sbjct: 283 IDADSR 288
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 112/287 (39%), Gaps = 44/287 (15%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
++LG G+ V + G VA+K + D M ++ E HPNV+
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRY 74
Query: 76 REVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKY-----FQQLISAVDFCHSR 128
T + +++A+E +L L ++Y +Q+ S V HS
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 129 GVSHRXXXXXXXXXXXXXX-------------XXISDFGL----SALPEQLRNDGLLHTQ 171
+ HR ISDFGL + R + L+
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN--LNNP 192
Query: 172 CGTPAYVAPEVLRKKGYDGSK------ADLWSCGVILYVLLA-GFLPFQDE--NIMNMYR 222
GT + APE+L + +K D++S G + Y +L+ G PF D+ N+ R
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 252
Query: 223 KVFKAE---FVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
+F + ++ + +A LIS+++ DP +R T ++R P F
Sbjct: 253 GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 3 EERHVLFGKYEMGRLLGKGTFAKVYYG--KQLMTGES---VAIKVINKDQLKKEFMMEQI 57
+E V K M R LG+G+F VY G K ++ E VAIK +N+ +E + +
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EF 65
Query: 58 KREISVMRLVRHPNVVELREVMATKKKIFVAMEYVKGGEL--FAKVARGRLRED--LARK 113
E SVM+ +VV L V++ + V ME + G+L + + R + + LA
Sbjct: 66 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 114 YFQQLI-------SAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRND- 165
++I + + ++ HR I DFG++ + D
Sbjct: 126 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDY 183
Query: 166 ------GLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILY 203
GLL + +++PE L K G + +D+WS GV+L+
Sbjct: 184 YRKGGKGLLPVR-----WMSPESL-KDGVFTTYSDVWSFGVVLW 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 87 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 146
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 147 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 203
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 204 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 263
Query: 249 SDPERR 254
D + R
Sbjct: 264 IDADSR 269
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 200
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 249 SDPERR 254
D + R
Sbjct: 261 IDADSR 266
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 200
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 260
Query: 249 SDPERR 254
D + R
Sbjct: 261 IDADSR 266
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 18 LGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELRE 77
+GKG + +V+ G GE+VA+K+ + K F ++ + ++RH N++
Sbjct: 45 VGKGRYGEVWRGS--WQGENVAVKIFSSRDEKSWFRETELYNTV----MLRHENILGFIA 98
Query: 78 VMATKK----KIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCH-----SR 128
T + ++++ Y + G L+ + L + + S + H ++
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 129 G---VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRN--DGLLHTQCGTPAYVAPEVL 183
G ++HR I+D GL+ + Q N D + + GT Y+APEVL
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 184 RKK----GYDGSK-ADLWSCGVILY 203
+ +D K D+W+ G++L+
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLW 243
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 204
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 249 SDPERR 254
D + R
Sbjct: 265 IDADSR 270
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 111/285 (38%), Gaps = 40/285 (14%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
++LG G+ V + G VA+K + D M ++ E HPNV+
Sbjct: 21 KILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRY 74
Query: 76 REVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKY-----FQQLISAVDFCHSR 128
T + +++A+E +L L ++Y +Q+ S V HS
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 129 GVSHRXXXXXXXXXXXXXX-------------XXISDFGLSALPE--QLRNDGLLHTQCG 173
+ HR ISDFGL + Q L+ G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 194
Query: 174 TPAYVAPEVLRKKGYDGSK------ADLWSCGVILYVLLA-GFLPFQDE--NIMNMYRKV 224
T + APE+L + +K D++S G + Y +L+ G PF D+ N+ R +
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGI 254
Query: 225 FKAE---FVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
F + ++ + +A LIS+++ DP +R T ++R P F
Sbjct: 255 FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 110/281 (39%), Gaps = 36/281 (12%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
++LG G+ V + G VA+K + D M ++ E HPNV+
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRY 92
Query: 76 REVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKY-----FQQLISAVDFCHSR 128
T + +++A+E +L L ++Y +Q+ S V HS
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 129 GVSHRXXXXXXXXXXXXXX-------------XXISDFGLSALPE--QLRNDGLLHTQCG 173
+ HR ISDFGL + Q L+ G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 174 TPAYVAPEVLRK--KGYDGSKADLWSCGVILYVLLA-GFLPFQDE--NIMNMYRKVFKAE 228
T + APE+L + K D++S G + Y +L+ G PF D+ N+ R +F +
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD 272
Query: 229 ---FVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
++ + +A LIS+++ DP +R T ++R P F
Sbjct: 273 EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 199
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 259
Query: 249 SDPERR 254
D + R
Sbjct: 260 IDADSR 265
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 8/251 (3%)
Query: 9 FGKYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVR 68
FG Y + RL+G+G VY + + VA+K+ ++ + +RE ++
Sbjct: 33 FGPYRLRRLVGRGGXGDVYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQ 92
Query: 69 HPNVVELREVMATKKKIFVAMEYVKGGELFAKVAR-GRLREDLARKYFQQLISAVDFCHS 127
P+VV + + +++V + G +L A + R G L A +Q+ SA+D H+
Sbjct: 93 EPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHA 152
Query: 128 RGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRKKG 187
G +HR + DFG+++ + L +T GT Y APE +
Sbjct: 153 AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT-VGTLYYXAPERF-SES 210
Query: 188 YDGSKADLWSCGVILYVLLAGFLPFQDENI----MNMYRKVFKAEFVYPPWISTDAKRLI 243
+ +AD+++ +LY L G P+Q + + ++ + + + V P I +I
Sbjct: 211 HATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVR-PGIPVAFDAVI 269
Query: 244 SKLLVSDPERR 254
++ +PE R
Sbjct: 270 ARGXAKNPEDR 280
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 110/281 (39%), Gaps = 36/281 (12%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVEL 75
++LG G+ V + G VA+K + D M ++ E HPNV+
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRY 92
Query: 76 REVMATKKKIFVAMEYVKGG--ELFAKVARGRLREDLARKY-----FQQLISAVDFCHSR 128
T + +++A+E +L L ++Y +Q+ S V HS
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 152
Query: 129 GVSHRXXXXXXXXXXXXXX-------------XXISDFGLSALPE--QLRNDGLLHTQCG 173
+ HR ISDFGL + Q L+ G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 174 TPAYVAPEVLRK--KGYDGSKADLWSCGVILYVLLA-GFLPFQDE--NIMNMYRKVFKAE 228
T + APE+L + K D++S G + Y +L+ G PF D+ N+ R +F +
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD 272
Query: 229 ---FVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
++ + +A LIS+++ DP +R T ++R P F
Sbjct: 273 EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 143
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 144 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 200
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 201 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM 260
Query: 249 SDPERR 254
D + R
Sbjct: 261 IDADSR 266
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 197
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM 257
Query: 249 SDPERR 254
D + R
Sbjct: 258 IDADSR 263
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 78 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVH 137
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 138 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 194
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 195 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 254
Query: 249 SDPERR 254
D + R
Sbjct: 255 IDADSR 260
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + + + G L V ++++ +Y Q+ +++ R
Sbjct: 81 RLLGICLT-STVQLITQLMPFGXLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFGL+ L + H + G P ++A E + +
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 195
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 196 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 254
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 255 CWMIDADSR 263
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 197
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 249 SDPERR 254
D + R
Sbjct: 258 IDADSR 263
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 91 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 150
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 151 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 207
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 208 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM 267
Query: 249 SDPERR 254
D + R
Sbjct: 268 IDADSR 273
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 75 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 134
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 135 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 191
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 192 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 251
Query: 249 SDPERR 254
D + R
Sbjct: 252 IDADSR 257
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++L G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 88 RLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFGL+ L + H + G P ++A E + +
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 202
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 203 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 261
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 262 CWMIDADSR 270
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 83 RLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFG + L + H + G P ++A E + +
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 197
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 198 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 256
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 257 CWMIDADSR 265
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 120/333 (36%), Gaps = 84/333 (25%)
Query: 7 VLFGKYEMGRLLGKGTFAKVYYG-KQLMTGESVAIKVI-NKDQLKKEFMMEQIKREISVM 64
VL +YE+ LG+G F KV G VA+K++ N D+ E + EI V+
Sbjct: 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR-----YCEAARSEIQVL 65
Query: 65 RLVR--HPN----VVELREVMATKKKIFVAMEYVKGGELFAKVARGRL--REDLARKYFQ 116
+ PN V++ E I + E + G L R D RK
Sbjct: 66 EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAY 125
Query: 117 QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXX-------------------XISDFGLSA 157
Q+ +V+F HS ++H + DFG +
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 158 LPEQLRNDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLAGF--LPFQD- 214
++ + T T Y APEV+ G+ D+WS G IL GF P D
Sbjct: 186 YDDEHHS-----TLVSTRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTHDS 239
Query: 215 -------ENIM-----NMYRKVFKAEFVYP---PW---------------------ISTD 238
E I+ +M +K K ++ + W +S D
Sbjct: 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQD 299
Query: 239 AKR-----LISKLLVSDPERRITIQSIMRVPWF 266
+ LI K+L DP +RIT++ ++ P+F
Sbjct: 300 VEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 43/291 (14%)
Query: 2 EEERHVLFGKYEMG--RLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKR 59
EE V+ GK +LG G + Y + + VA+K I L + F R
Sbjct: 14 EETSVVIVGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRI----LPECFSFAD--R 66
Query: 60 EISVMRLV-RHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYF--- 115
E+ ++R HPNV+ ++ ++A+E + L+E + +K F
Sbjct: 67 EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE----------LCAATLQEYVEQKDFAHL 116
Query: 116 --------QQLISAVDFCHSRGVSHRXXXXXXXXXXXXXX-----XXISDFGLSALPEQL 162
QQ S + HS + HR ISDFGL
Sbjct: 117 GLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176
Query: 163 RNDGLLHTQC-GTPAYVAPEVLRKKGYDGSK--ADLWSCGVILYVLLA-GFLPFQD--EN 216
R+ + GT ++APE+L + + D++S G + Y +++ G PF +
Sbjct: 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR 236
Query: 217 IMNMYRKVFKAEFVYPP-WISTDAKRLISKLLVSDPERRITIQSIMRVPWF 266
N+ + ++P A+ LI K++ DP++R + + +++ P+F
Sbjct: 237 QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 83 RLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFG + L + H + G P ++A E + +
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 197
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 198 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 256
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 257 CWMIDADSR 265
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 104/249 (41%), Gaps = 16/249 (6%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 74 ELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQ----QLISAVDFCHSRG 129
L + T + + M+ + G L V ++++ +Y Q+ +++ R
Sbjct: 85 RLLGICLT-STVQLIMQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 130 VSHRXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKG 187
+ HR I+DFG + L + H + G P ++A E + +
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKWMALESILHRI 199
Query: 188 YDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISK 245
Y ++D+WS GV ++ L+ G P+ + + K E PP + D ++ K
Sbjct: 200 YT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 258
Query: 246 LLVSDPERR 254
+ D + R
Sbjct: 259 CWMIDADSR 267
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 17/206 (8%)
Query: 12 YEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPN 71
Y++ R LG+G +++V+ + E VA+K LK + + + L PN
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVK-----ILKPVKKKKIKREIKILENLRGGPN 93
Query: 72 VVELREVM--ATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAVDFCHSRG 129
++ L +++ + + E+V + F ++ + D+ R Y +++ A+D+CHS G
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQTLTDYDI-RFYMYEILKALDYCHSMG 151
Query: 130 VSHRXXX-XXXXXXXXXXXXXISDFGLSAL--PEQLRNDGLLHTQCGTPAYVAPEVLRKK 186
+ HR + D+GL+ P Q N + + + PE+L
Sbjct: 152 IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYN-----VRVASRYFKGPELLVDY 206
Query: 187 GYDGSKADLWSCGVILYVLLAGFLPF 212
D+WS G +L ++ PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 9/191 (4%)
Query: 18 LGKGTFAKV---YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G F V YY Q+ I K++ + +++ E +VM+ + +P +V
Sbjct: 19 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHR 133
+ + + + V ME + G L + + R +++ + Q+ + + HR
Sbjct: 77 MIGICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
ISDFGLS N T P + APE + + SK
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF-SSK 194
Query: 193 ADLWSCGVILY 203
+D+WS GV+++
Sbjct: 195 SDVWSFGVLMW 205
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 38/224 (16%)
Query: 11 KYEMGRLLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRH- 69
K+ +GR +G G+F ++Y G + T E VAIK+ N + + E + R+++
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYES-----KIYRILQGG 62
Query: 70 ---PNV----VELREVMATKKKIFVAMEYVKGGELFAKVARGRLREDLARKYFQQLISAV 122
PNV VE + + ++E +LF +R +L Q+I+ V
Sbjct: 63 TGIPNVRWFGVEGDYNVLVMDLLGPSLE-----DLFNFCSR-KLSLKTVLMLADQMINRV 116
Query: 123 DFCHSRGVSHRXXXXXX---XXXXXXXXXXISDFGLSALPEQLRNDGLLHTQ-------- 171
+F HS+ HR I DFGL+ + D H
Sbjct: 117 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA----KKYRDTSTHQHIPYRENKN 172
Query: 172 -CGTPAYVAPEVLRKKGYDGS-KADLWSCGVILYVLLAGFLPFQ 213
GT Y + V G + S + DL S G +L L G LP+Q
Sbjct: 173 LTGTARYAS--VNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 18 LGKGTFAKVYYGK-QLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V G Q+ I K++ + +++ E +VM+ + +P +V +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXX 135
+ + + V ME + G L + + R +++ + Q+ + + HR
Sbjct: 95 GICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKAD 194
ISDFGLS N T P + APE + + SK+D
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSD 212
Query: 195 LWSCGVILY 203
+WS GV+++
Sbjct: 213 VWSFGVLMW 221
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 18 LGKGTFAKVYYGK-QLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V G Q+ I K++ + +++ E +VM+ + +P +V +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXX 135
+ + + V ME + G L + + R +++ + Q+ + + HR
Sbjct: 95 GICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKAD 194
ISDFGLS N T P + APE + + SK+D
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSD 212
Query: 195 LWSCGVILY 203
+WS GV+++
Sbjct: 213 VWSFGVLMW 221
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 18 LGKGTFAKVYYGK-QLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V G Q+ I K++ + +++ E +VM+ + +P +V +
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXX 135
+ + + V ME + G L + + R +++ + Q+ + + HR
Sbjct: 93 GICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 151
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKAD 194
ISDFGLS N T P + APE + + SK+D
Sbjct: 152 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSKSD 210
Query: 195 LWSCGVILY 203
+WS GV+++
Sbjct: 211 VWSFGVLMW 219
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 112/290 (38%), Gaps = 68/290 (23%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKR------------EISVM 64
++G+G F +V + I KD L+ + ++++K E+ V+
Sbjct: 29 VIGEGNFGQVLKAR------------IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 76
Query: 65 -RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLRE----------DLARK 113
+L HPN++ L + +++A+EY G L + + R+ E +
Sbjct: 77 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 114 YFQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL--RN 164
QQL+ +D+ + HR I+DFGLS E +
Sbjct: 137 SSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKT 196
Query: 165 DGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
G L + ++A E L Y + +D+WS GV+L+ +++ G P+ +Y K
Sbjct: 197 MGRLPVR-----WMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 250
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + + P L D E + +MR W K + RP
Sbjct: 251 LPQGYRLEKP-------------LNCDDE----VYDLMRQCWREKPYERP 283
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 9/191 (4%)
Query: 18 LGKGTFAKV---YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G F V YY Q+ I K++ + +++ E +VM+ + +P +V
Sbjct: 13 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHR 133
+ + + + V ME + G L + + R +++ + Q+ + + HR
Sbjct: 71 MIGICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 129
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
ISDFGLS N T P + APE + + SK
Sbjct: 130 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSK 188
Query: 193 ADLWSCGVILY 203
+D+WS GV+++
Sbjct: 189 SDVWSFGVLMW 199
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 40/227 (17%)
Query: 11 KYEMGRLLGKGTFAKVY----YG-KQLMTGESVAIKVINKDQLKKEF--MMEQIKREISV 63
+ +G+ LG+G F +V +G + T +VA+K++ + E +M ++K +
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---IL 85
Query: 64 MRLVRHPNVVELREVMATKK--KIFVAMEYVKGGELFAKVARGR-------LREDLARKY 114
+ + H NVV L TK + V +E+ K G L + R EDL + +
Sbjct: 86 IHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 115 FQ---------QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS----ALPEQ 161
Q+ ++F SR HR I DFGL+ P+
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 162 LR-NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
+R D L + ++APE + + Y ++D+WS GV+L+ + +
Sbjct: 205 VRKGDARLPLK-----WMAPETIFDRVYT-IQSDVWSFGVLLWEIFS 245
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 9/191 (4%)
Query: 18 LGKGTFAKV---YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G F V YY Q+ I K++ + +++ E +VM+ + +P +V
Sbjct: 15 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHR 133
+ + + + V ME + G L + + R +++ + Q+ + + HR
Sbjct: 73 MIGICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
ISDFGLS N T P + APE + + SK
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSK 190
Query: 193 ADLWSCGVILY 203
+D+WS GV+++
Sbjct: 191 SDVWSFGVLMW 201
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 9/191 (4%)
Query: 18 LGKGTFAKV---YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G F V YY Q+ I K++ + +++ E +VM+ + +P +V
Sbjct: 19 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHR 133
+ + + + V ME + G L + + R +++ + Q+ + + HR
Sbjct: 77 MIGICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
ISDFGLS N T P + APE + + SK
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSK 194
Query: 193 ADLWSCGVILY 203
+D+WS GV+++
Sbjct: 195 SDVWSFGVLMW 205
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++L G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 204
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 249 SDPERR 254
D + R
Sbjct: 265 IDADSR 270
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 112/290 (38%), Gaps = 68/290 (23%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKR------------EISVM 64
++G+G F +V + I KD L+ + ++++K E+ V+
Sbjct: 32 VIGEGNFGQVLKAR------------IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 79
Query: 65 -RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLRE----------DLARK 113
+L HPN++ L + +++A+EY G L + + R+ E +
Sbjct: 80 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 114 YFQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL--RN 164
QQL+ +D+ + HR I+DFGLS E +
Sbjct: 140 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 199
Query: 165 DGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
G L + ++A E L Y + +D+WS GV+L+ +++ G P+ +Y K
Sbjct: 200 MGRLPVR-----WMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 253
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + + P L D E + +MR W K + RP
Sbjct: 254 LPQGYRLEKP-------------LNCDDE----VYDLMRQCWREKPYERP 286
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 142
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFG + L + H + G P ++A E + + Y
Sbjct: 143 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 199
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 200 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWM 259
Query: 249 SDPERR 254
D + R
Sbjct: 260 IDADSR 265
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 9/191 (4%)
Query: 18 LGKGTFAKV---YYGKQLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVE 74
LG G F V YY Q+ I K++ + +++ E +VM+ + +P +V
Sbjct: 25 LGSGNFGTVKKGYY--QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 75 LREVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHR 133
+ + + + V ME + G L + + R +++ + Q+ + + HR
Sbjct: 83 MIGICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 141
Query: 134 XXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSK 192
ISDFGLS N T P + APE + + SK
Sbjct: 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF-SSK 200
Query: 193 ADLWSCGVILY 203
+D+WS GV+++
Sbjct: 201 SDVWSFGVLMW 211
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 18 LGKGTFAKVYYGK-QLMTGESVAIKVINKDQLKKEFMMEQIKREISVMRLVRHPNVVELR 76
LG G F V G Q+ I K++ + +++ E +VM+ + +P +V +
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 77 EVMATKKKIFVAMEYVKGGELFAKVARGR-LREDLARKYFQQLISAVDFCHSRGVSHRXX 135
+ + + V ME + G L + + R +++ + Q+ + + HR
Sbjct: 437 GICEAESWMLV-MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 495
Query: 136 XXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCGTPA-YVAPEVLRKKGYDGSKAD 194
ISDFGLS N T P + APE + + SK+D
Sbjct: 496 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS-SKSD 554
Query: 195 LWSCGVILY 203
+WS GV+++
Sbjct: 555 VWSFGVLMW 563
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 112/290 (38%), Gaps = 68/290 (23%)
Query: 17 LLGKGTFAKVYYGKQLMTGESVAIKVINKDQLKKEFMMEQIKR------------EISVM 64
++G+G F +V + I KD L+ + ++++K E+ V+
Sbjct: 22 VIGEGNFGQVLKAR------------IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 69
Query: 65 -RLVRHPNVVELREVMATKKKIFVAMEYVKGGELFAKVARGRLRE----------DLARK 113
+L HPN++ L + +++A+EY G L + + R+ E +
Sbjct: 70 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 114 YFQQLIS-------AVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL--RN 164
QQL+ +D+ + HR I+DFGLS E +
Sbjct: 130 SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 189
Query: 165 DGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPFQDENIMNMYRK 223
G L + ++A E L Y + +D+WS GV+L+ +++ G P+ +Y K
Sbjct: 190 MGRLPVR-----WMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 243
Query: 224 VFKAEFVYPPWISTDAKRLISKLLVSDPERRITIQSIMRVPWFRKGFTRP 273
+ + + P L D E + +MR W K + RP
Sbjct: 244 LPQGYRLEKP-------------LNCDDE----VYDLMRQCWREKPYERP 276
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 11 KYEMGRLLGKGTFAKVY----YG-KQLMTGESVAIKVINKDQLKKEF--MMEQIKREISV 63
+ ++G+ LG+G F +V +G + T +VA+K++ + E +M ++K +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---IL 84
Query: 64 MRLVRHPNVVELREVMATKK--KIFVAMEYVKGGELFAKVARGR--------LREDLARK 113
+ + H NVV L TK + V +E+ K G L + R EDL +
Sbjct: 85 IHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 114 YFQ---------QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS----ALPE 160
+ Q+ ++F SR HR I DFGL+ P+
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 161 QLR-NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
+R D L + ++APE + + Y ++D+WS GV+L+ + +
Sbjct: 204 XVRKGDARLPLK-----WMAPETIFDRVYT-IQSDVWSFGVLLWEIFS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 11 KYEMGRLLGKGTFAKVY----YG-KQLMTGESVAIKVINKDQLKKEF--MMEQIKREISV 63
+ ++G+ LG+G F +V +G + T +VA+K++ + E +M ++K +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---IL 84
Query: 64 MRLVRHPNVVELREVMATKK--KIFVAMEYVKGGELFAKVARGR--------LREDLARK 113
+ + H NVV L TK + V +E+ K G L + R EDL +
Sbjct: 85 IHIGHHLNVVNLLGA-CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 114 YFQ---------QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS----ALPE 160
+ Q+ ++F SR HR I DFGL+ P+
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 161 QLR-NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
+R D L + ++APE + + Y ++D+WS GV+L+ + +
Sbjct: 204 XVRKGDARLPLK-----WMAPETIFDRVYT-IQSDVWSFGVLLWEIFS 245
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++L G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFGL+ L + H + G P ++A E + + Y
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 197
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 249 SDPERR 254
D + R
Sbjct: 258 IDADSR 263
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 147
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFG + L + H + G P ++A E + + Y
Sbjct: 148 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 204
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 205 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 264
Query: 249 SDPERR 254
D + R
Sbjct: 265 IDADSR 270
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 37/225 (16%)
Query: 11 KYEMGRLLGKGTFAKVY----YG-KQLMTGESVAIKVINKDQLKKEF--MMEQIKREISV 63
+ ++G+ LG+G F +V +G + T +VA+K++ + E +M ++K +
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK---IL 86
Query: 64 MRLVRHPNVVELREVMATK-KKIFVAMEYVKGGELFAKVARGRLR------EDLARKYFQ 116
+ + H NVV L + V +E+ K G L + R EDL + +
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLT 146
Query: 117 ---------QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS----ALPEQLR 163
Q+ ++F SR HR I DFGL+ P+ +R
Sbjct: 147 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 164 -NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLA 207
D L + ++APE + + Y ++D+WS GV+L+ + +
Sbjct: 207 KGDARLPLK-----WMAPETIFDRVYT-IQSDVWSFGVLLWEIFS 245
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 105 RLREDLAR--KYFQQLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLSALPEQL 162
+ E +AR Y + I + H +SHR I+DFGL+ E
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 163 RNDGLLHTQCGTPAYVAPEVL------RKKGYDGSKADLWSCGVILYVLLAG-------- 208
++ G H Q GT Y+APEVL ++ + + D+++ G++L+ L +
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAF--LRIDMYAMGLVLWELASRCTAADGPV 242
Query: 209 ---FLPFQDE 215
LPF++E
Sbjct: 243 DEYMLPFEEE 252
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 10/246 (4%)
Query: 16 RLLGKGTFAKVYYGKQLMTGESVAIKVINKD--QLKKEFMMEQIKREISVMRLVRHPNVV 73
++LG G F VY G + GE V I V K+ + ++I E VM V +P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 74 ELREVMATKKKIFVAMEYVKGGEL-FAKVARGRLREDLARKYFQQLISAVDFCHSRGVSH 132
L + T + G L + + + + + Q+ +++ R + H
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 133 RXXXXXXXXXXXXXXXXISDFGLSALPEQLRNDGLLHTQCG-TPA-YVAPEVLRKKGYDG 190
R I+DFG + L + H + G P ++A E + + Y
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE--YHAEGGKVPIKWMALESILHRIYT- 197
Query: 191 SKADLWSCGVILYVLLA-GFLPFQDENIMNMYRKVFKAE-FVYPPWISTDAKRLISKLLV 248
++D+WS GV ++ L+ G P+ + + K E PP + D ++ K +
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWM 257
Query: 249 SDPERR 254
D + R
Sbjct: 258 IDADSR 263
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 40/233 (17%)
Query: 11 KYEMGRLLGKGTFAKVY----YG-KQLMTGESVAIKVINKDQLKKEF--MMEQIKREISV 63
+ ++G+ LG+G F +V +G + T +VA+K++ + E +M ++K +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK---IL 75
Query: 64 MRLVRHPNVVELREVMATK-KKIFVAMEYVKGGELFAKVARGR--------LREDLARKY 114
+ + H NVV L + V +E+ K G L + R EDL + +
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 115 FQ---------QLISAVDFCHSRGVSHRXXXXXXXXXXXXXXXXISDFGLS----ALPEQ 161
Q+ ++F SR HR I DFGL+ P+
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 162 LR-NDGLLHTQCGTPAYVAPEVLRKKGYDGSKADLWSCGVILYVLLA-GFLPF 212
+R D L + ++APE + + Y ++D+WS GV+L+ + + G P+
Sbjct: 196 VRKGDARLPLK-----WMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPY 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,937,168
Number of Sequences: 62578
Number of extensions: 437758
Number of successful extensions: 4219
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 483
Number of HSP's that attempted gapping in prelim test: 1386
Number of HSP's gapped (non-prelim): 1336
length of query: 459
length of database: 14,973,337
effective HSP length: 102
effective length of query: 357
effective length of database: 8,590,381
effective search space: 3066766017
effective search space used: 3066766017
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)