Query 012639
Match_columns 459
No_of_seqs 247 out of 1233
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 13:21:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012639.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012639hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hcn_A Ferrochelatase, mitocho 100.0 6E-102 2E-106 793.6 39.5 350 81-439 2-357 (359)
2 1lbq_A Ferrochelatase; rossman 100.0 2.1E-97 7E-102 761.7 26.0 349 80-438 4-358 (362)
3 2h1v_A Ferrochelatase; rossman 100.0 8.8E-81 3E-85 627.1 33.4 301 81-408 3-309 (310)
4 2xvy_A Chelatase, putative; me 100.0 4.2E-33 1.4E-37 273.3 20.2 220 161-408 29-266 (269)
5 2jh3_A Ribosomal protein S2-re 100.0 7.6E-30 2.6E-34 269.3 11.8 237 146-411 9-269 (474)
6 2xwp_A Sirohydrochlorin cobalt 100.0 1E-26 3.6E-31 228.2 23.5 230 147-408 9-257 (264)
7 3lyh_A Cobalamin (vitamin B12) 99.1 1.2E-09 4.2E-14 94.9 14.0 116 271-408 6-122 (126)
8 3lyh_A Cobalamin (vitamin B12) 99.0 2.7E-09 9.2E-14 92.7 11.5 110 147-264 12-123 (126)
9 1tjn_A Sirohydrochlorin cobalt 98.9 7.4E-10 2.5E-14 100.3 4.6 110 147-264 31-149 (156)
10 2xws_A Sirohydrochlorin cobalt 98.9 7.2E-09 2.5E-13 90.3 10.2 117 271-409 4-128 (133)
11 2xws_A Sirohydrochlorin cobalt 98.9 1.4E-09 4.7E-14 94.9 5.6 110 147-264 10-128 (133)
12 1tjn_A Sirohydrochlorin cobalt 98.8 3.2E-08 1.1E-12 89.5 10.3 117 271-409 25-149 (156)
13 2xvy_A Chelatase, putative; me 98.5 1.2E-06 4E-11 85.3 13.3 126 270-409 9-141 (269)
14 2xwp_A Sirohydrochlorin cobalt 98.0 2.3E-05 7.8E-10 76.3 11.4 123 271-409 3-133 (264)
15 2jh3_A Ribosomal protein S2-re 98.0 4.3E-06 1.5E-10 88.3 5.9 120 271-409 4-136 (474)
16 2h1v_A Ferrochelatase; rossman 98.0 3.6E-05 1.2E-09 76.9 11.4 109 277-408 51-166 (310)
17 1lbq_A Ferrochelatase; rossman 97.9 6.2E-05 2.1E-09 76.9 11.8 77 330-409 107-188 (362)
18 3hcn_A Ferrochelatase, mitocho 97.4 0.0012 3.9E-08 67.5 12.2 111 147-264 207-327 (359)
19 4b4o_A Epimerase family protei 60.0 7.4 0.00025 36.7 4.3 35 83-119 211-247 (298)
20 1olt_A Oxygen-independent copr 55.8 1.8E+02 0.0061 29.5 15.9 138 248-405 83-231 (457)
21 4dik_A Flavoprotein; TM0755, e 54.4 1.8E+02 0.0063 29.3 14.8 69 186-260 220-292 (410)
22 3hh8_A Metal ABC transporter s 52.3 1E+02 0.0036 29.6 11.2 135 242-401 123-283 (294)
23 3bdk_A D-mannonate dehydratase 49.8 22 0.00076 36.1 6.1 66 328-395 26-92 (386)
24 1pq4_A Periplasmic binding pro 45.5 1.3E+02 0.0044 28.9 10.5 136 242-407 132-288 (291)
25 3p6l_A Sugar phosphate isomera 39.9 1.3E+02 0.0046 27.2 9.4 61 335-405 66-126 (262)
26 3ff4_A Uncharacterized protein 35.6 23 0.00079 29.9 3.0 38 333-381 70-107 (122)
27 2qgq_A Protein TM_1862; alpha- 34.7 2.5E+02 0.0084 26.7 10.7 56 293-355 138-194 (304)
28 1uta_A FTSN, MSGA, cell divisi 34.0 22 0.00076 27.4 2.4 47 157-203 20-75 (81)
29 2hl0_A Threonyl-tRNA synthetas 33.6 1E+02 0.0036 27.0 6.9 45 342-387 69-116 (143)
30 2nly_A BH1492 protein, diverge 33.1 3.2E+02 0.011 25.8 16.5 88 173-260 27-126 (245)
31 1tz9_A Mannonate dehydratase; 32.6 78 0.0027 31.0 6.8 64 328-393 16-81 (367)
32 2itb_A TRNA-(MS(2)IO(6)A)-hydr 32.5 3.6 0.00012 38.5 -2.8 56 238-298 47-102 (206)
33 2ojp_A DHDPS, dihydrodipicolin 29.2 3.4E+02 0.012 25.8 10.6 63 150-217 48-113 (292)
34 1t5b_A Acyl carrier protein ph 27.4 3E+02 0.01 23.6 9.3 29 149-177 9-39 (201)
35 3cx3_A Lipoprotein; zinc-bindi 26.9 2.5E+02 0.0084 26.6 9.1 136 242-403 119-276 (284)
36 2yxb_A Coenzyme B12-dependent 26.6 1E+02 0.0036 26.8 5.9 104 84-203 19-126 (161)
37 3mfq_A TROA, high-affinity zin 26.6 2.7E+02 0.0091 26.4 9.3 121 241-383 102-242 (282)
38 1x60_A Sporulation-specific N- 26.2 55 0.0019 24.7 3.5 45 157-201 20-73 (79)
39 2prs_A High-affinity zinc upta 25.9 1.6E+02 0.0054 28.0 7.5 136 242-403 116-274 (284)
40 3rjz_A N-type ATP pyrophosphat 24.6 1.5E+02 0.0051 27.9 6.8 122 191-352 21-146 (237)
41 3rpe_A MDAB, modulator of drug 24.1 3.7E+02 0.013 24.7 9.4 70 153-228 42-111 (218)
42 3fkr_A L-2-keto-3-deoxyarabona 23.9 3.1E+02 0.011 26.4 9.3 37 171-211 75-114 (309)
43 3szu_A ISPH, 4-hydroxy-3-methy 23.6 40 0.0014 33.7 2.7 47 237-285 44-93 (328)
44 2ehh_A DHDPS, dihydrodipicolin 22.7 4.3E+02 0.015 25.0 10.0 51 172-226 68-121 (294)
45 2r8w_A AGR_C_1641P; APC7498, d 21.9 4.9E+02 0.017 25.3 10.4 72 150-226 81-155 (332)
46 3lub_A Putative creatinine ami 21.7 1.7E+02 0.0058 27.6 6.7 22 187-208 99-120 (254)
47 3qze_A DHDPS, dihydrodipicolin 21.6 4.4E+02 0.015 25.4 9.9 51 172-226 91-144 (314)
48 1o97_C Electron transferring f 21.5 2.9E+02 0.01 26.1 8.4 48 179-227 61-108 (264)
49 3cpr_A Dihydrodipicolinate syn 21.4 4.8E+02 0.016 24.9 10.1 50 172-225 84-136 (304)
50 3flu_A DHDPS, dihydrodipicolin 21.3 4.6E+02 0.016 25.0 9.9 50 172-225 75-127 (297)
51 3lmz_A Putative sugar isomeras 21.2 3.4E+02 0.012 24.4 8.6 62 334-405 63-124 (257)
52 2ejb_A Probable aromatic acid 20.8 1E+02 0.0035 28.0 4.7 51 327-381 127-180 (189)
No 1
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=5.8e-102 Score=793.63 Aligned_cols=350 Identities=41% Similarity=0.661 Sum_probs=331.6
Q ss_pred CCceEEEEEccCCCCCcCcHHHHHHhhcCCCCeeeCCchhhhhhhHHHHHHHhccChhhHHhhhccCCCCchHHHHHHHH
Q 012639 81 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 160 (459)
Q Consensus 81 ~~k~aVLLlnlG~P~s~~dV~~fL~~~l~D~~Vi~lP~~~~~~~~~L~~~I~~~R~~k~~~~Y~~IgggSPL~~~T~~qa 160 (459)
++|+||||||||||++++||++||+|||+|++||++| ++++|+++|+++|++|++++|++|||||||+.+|++|+
T Consensus 2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P-----~~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~ 76 (359)
T 3hcn_A 2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLP-----IQNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQG 76 (359)
T ss_dssp CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCT-----THHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccc-----hHHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 5789999999999999999999999999999999998 25689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC---CCceEEeeeeccCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHHHHHHHhccCCCCc
Q 012639 161 QALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP 237 (459)
Q Consensus 161 ~~L~~~L~~~~---~~~~V~~amrY~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~~~~~~~~~~~~ 237 (459)
++|++.|++.+ .+++|++|||||+|+|+++|++|+++|+++|+++|||||||++||||+++++.+.+++....+.+.
T Consensus 77 ~~L~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~ 156 (359)
T 3hcn_A 77 EGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMK 156 (359)
T ss_dssp HHHHHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSE
T ss_pred HHHHHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHHhccCCCCc
Confidence 99999998754 468999999999999999999999999999999999999999999999999999988766556778
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhhcCC--CCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCCC
Q 012639 238 VSIIRSWYQREGYVNSMADLIQKELGKFQK--PEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINND 315 (459)
Q Consensus 238 ~~~i~~~~~~p~yI~ala~~I~~~l~~~~~--~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~ 315 (459)
+++|++|++||+||+|++++|++++++++. ++++.|||||||+|+++++ +||||+.||++|+++|+++| |+.++
T Consensus 157 ~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~~-~GDpY~~q~~~t~~lv~e~L---g~~~~ 232 (359)
T 3hcn_A 157 WSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVN-RGDPYPQEVSATVQKVMERL---EYCNP 232 (359)
T ss_dssp EEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCSC
T ss_pred eEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhcc-cCCCHHHHHHHHHHHHHHHc---CCCCC
Confidence 999999999999999999999999988754 2457899999999999995 69999999999999999999 87667
Q ss_pred eeEEEecCccCCCCCCCcHHHHHHHhhhcCCceEEEEcccccccchhhhHhHHHHH-HHHHHHcCCeeEEEcCCCCCCHH
Q 012639 316 HTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEY-KELALESGIENWGRVPALNCTPS 394 (459)
Q Consensus 316 ~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~-ke~a~e~G~~~~~rvp~LNd~p~ 394 (459)
|.++||||+||.+||+|+|+|+|++|+++|+|+|+|+||||++||+|||||||+|+ ++.|+++|+++|.|+||||+||.
T Consensus 233 ~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~gFvsD~lETL~Eid~E~~~e~a~e~G~~~~~rip~LNd~p~ 312 (359)
T 3hcn_A 233 YRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPL 312 (359)
T ss_dssp EEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECTTCCSCCCCCHHHHCHHHHHHHHHHTCCCEEEECCCSTTCHH
T ss_pred EEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCccchhhHHhHHHHHHHHHHHHHHhCCCceEEEcCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999 58999999989999999999999
Q ss_pred HHHHHHHHHHHHcCCccccCCCCCCCCCCCCChhHHHHHHHHHHH
Q 012639 395 FITDLADAVIEALPSALAMSAPKNISQEDDHNPVRYAIKMFFGSI 439 (459)
Q Consensus 395 fi~aLadlV~e~l~~~~~~~~~~~~~c~~c~~~~~~~~k~~~~~~ 439 (459)
||++|+++|.+++++.+.+|+|+.++||+|+|++|.++|.||+++
T Consensus 313 fi~~La~lv~~~l~~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~ 357 (359)
T 3hcn_A 313 FSKALADLVHSHIQSNELCSKQLTLSCPLCVNPVCRETKSFFTSQ 357 (359)
T ss_dssp HHHHHHHHHHHHHHHTCSSCGGGGSCCTTCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhcCCccCcccCCCCCCCCchhhHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999863
No 2
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=2.1e-97 Score=761.68 Aligned_cols=349 Identities=35% Similarity=0.570 Sum_probs=329.8
Q ss_pred cCCceEEEEEccCCCCCcCcHHHHHHhhcCCCCeeeCCchhhhhhhHHHHHHHhccChhhHHhhhccCCCCchHHHHHHH
Q 012639 80 AEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQ 159 (459)
Q Consensus 80 ~~~k~aVLLlnlG~P~s~~dV~~fL~~~l~D~~Vi~lP~~~~~~~~~L~~~I~~~R~~k~~~~Y~~IgggSPL~~~T~~q 159 (459)
+++|+||||||||||++++||++||+|||+|++||++|++ | |++|+++|+++|++|++++|+.|||||||+.+|++|
T Consensus 4 ~~~k~gvLL~nlG~P~~~~~V~~fL~~~~~d~~vi~~p~~-~--~~~l~~~I~~~R~~k~~~~Y~~ig~gSPL~~~t~~q 80 (362)
T 1lbq_A 4 KRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAK-Y--QKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQ 80 (362)
T ss_dssp -CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSS-S--HHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHH
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHHHhccCCccccCCHH-H--HHHHhhhcCccchHHHHHHHHHcCCCCccHHHHHHH
Confidence 5678999999999999999999999999999999999986 3 568999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC---CCceEEeeeeccCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHHHHHHHhccCCCC
Q 012639 160 AQALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRL 236 (459)
Q Consensus 160 a~~L~~~L~~~~---~~~~V~~amrY~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~~~~~~~~~~~ 236 (459)
+++|++.|++.+ .+++|++|||||+|+|+++|++|+++|+++|+++|||||||++|||++.+++.+++++....+.+
T Consensus 81 ~~~L~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~~i~~~l~~~~~~~~i 160 (362)
T 1lbq_A 81 ATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSI 160 (362)
T ss_dssp HHHHHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHHHHHHHHHhcccCCCc
Confidence 999999998654 57899999999999999999999999999999999999999999999999999999887666788
Q ss_pred cEEEecCCCCCHHHHHHHHHHHHHHHhhcCCC--CceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCC
Q 012639 237 PVSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINN 314 (459)
Q Consensus 237 ~~~~i~~~~~~p~yI~ala~~I~~~l~~~~~~--~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~ 314 (459)
.+++|++|++||.||+|++++|+++++.++.+ +++.|||||||+|+++++ +||||+.||++|+++|+++| |+..
T Consensus 161 ~i~~i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~~-~GDpY~~q~~~ta~ll~e~l---g~~~ 236 (362)
T 1lbq_A 161 SWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVN-TGDAYPAEVAATVYNIMQKL---KFKN 236 (362)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCS
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCcccccc-CCCcHHHHHHHHHHHHHHHc---CCCC
Confidence 89999999999999999999999999887542 457999999999999995 69999999999999999999 7755
Q ss_pred CeeEEEecCccCCCCCCCcHHHHHHHhhhcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHH
Q 012639 315 DHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPS 394 (459)
Q Consensus 315 ~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p~ 394 (459)
+|.++||||+||.+||+|+|+|+|++| ++|+|+|+|+||||++||+|||||||+|++++|+++|. |.|+||||+||.
T Consensus 237 ~~~~~fQSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~gFvsD~lETL~eid~e~~e~~~~~G~--~~~~p~Ln~~p~ 313 (362)
T 1lbq_A 237 PYRLVWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKDK--FKRCESLNGNQT 313 (362)
T ss_dssp CEEEEEECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECTTCSSCCHHHHTCCCCCCCTTCTTGGG--EEECCCCTTCHH
T ss_pred CEEEEEECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECCeechhhHhhHHHHHHHHHHHHHhCCC--EEEcCCCCCCHH
Confidence 799999999999999999999999999 99999999999999999999999999999999999994 999999999999
Q ss_pred HHHHHHHHHHHHcCCccccCCCCCCCCCCC-CChhHHHHHHHHHH
Q 012639 395 FITDLADAVIEALPSALAMSAPKNISQEDD-HNPVRYAIKMFFGS 438 (459)
Q Consensus 395 fi~aLadlV~e~l~~~~~~~~~~~~~c~~c-~~~~~~~~k~~~~~ 438 (459)
|+++|+++|.+++.+...++.|..++|++| +|++|...|.||++
T Consensus 314 fi~~L~~lv~~~l~~~~~~~~~~~~~C~~c~~~~~~~~~~~~~~~ 358 (362)
T 1lbq_A 314 FIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGN 358 (362)
T ss_dssp HHHHHHHHHHHHHHHCCSSCTTHHHHHHHCCCSSCCSCHHHHSBC
T ss_pred HHHHHHHHHHHHhccCCCcccccCCCCCCCCcCchhhhHHHHhhc
Confidence 999999999999999999999999999999 79999999999975
No 3
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=100.00 E-value=8.8e-81 Score=627.13 Aligned_cols=301 Identities=29% Similarity=0.495 Sum_probs=280.8
Q ss_pred CCceEEEEEccCCCCCcCcHHHHHHhhcCCCCeeeCCchhhhhhhHHHHHHHhccChhhHHhhhccCCCCchHHHHHHHH
Q 012639 81 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 160 (459)
Q Consensus 81 ~~k~aVLLlnlG~P~s~~dV~~fL~~~l~D~~Vi~lP~~~~~~~~~L~~~I~~~R~~k~~~~Y~~IgggSPL~~~T~~qa 160 (459)
++|+||||||||||++++||++||+|+|+|+. +| ++|+++++++|+.|||||||+.+|++|+
T Consensus 3 ~~~~~vLl~n~G~P~~~~~v~~fL~~~~~~~~---~~---------------~~r~~~~~~~Y~~ig~gSPl~~~t~~q~ 64 (310)
T 2h1v_A 3 RKKMGLLVMAYGTPYKEEDIERYYTHIRRGRK---PE---------------PEMLQDLKDRYEAIGGISPLAQITEQQA 64 (310)
T ss_dssp CEEEEEEEEECCCCSSGGGHHHHHHHHTTTCC---CC---------------HHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCChHHHHHHHHHHhcCCC---CC---------------hHHHHHHHHHHHHCCCCChhHHHHHHHH
Confidence 46899999999999999999999999999864 24 2457899999999999999999999999
Q ss_pred HHHHHHHHhcCC--CceEEeeeeccCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHHHHHHHhccCCCCcE
Q 012639 161 QALKTALEAKNL--PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPV 238 (459)
Q Consensus 161 ~~L~~~L~~~~~--~~~V~~amrY~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~~~~~~~~~~~~~ 238 (459)
++|++.|++.++ +++|++|||||+|+|+++|++|+++|+++|+++|||||||++|+|++.+++.+++++.. .+.+
T Consensus 65 ~~L~~~L~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~~~~i~~~l~~~~---~~~i 141 (310)
T 2h1v_A 65 HNLEQHLNEIQDEITFKAYIGLAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLG---GLTI 141 (310)
T ss_dssp HHHHHHHHHHCSSEEEEEEEEESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHHHHHHHHHHHC---SCEE
T ss_pred HHHHHHHHhcCCCCCceEeehhcCCCCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHHHHHHHHHHhCC---CCeE
Confidence 999999987764 79999999999999999999999999999999999999999999999999999987754 4789
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHhhcCC--CCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCCCe
Q 012639 239 SIIRSWYQREGYVNSMADLIQKELGKFQK--PEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDH 316 (459)
Q Consensus 239 ~~i~~~~~~p~yI~ala~~I~~~l~~~~~--~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~ 316 (459)
++|++|++||.||+|++++|+++++.++. ++++.|||||||+|+++++ +||||+.||.+|+++|+++| |+ .+|
T Consensus 142 ~~i~~~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~~-~gDpY~~~~~~t~~~l~e~l---~~-~~~ 216 (310)
T 2h1v_A 142 TSVESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKE-FGDPYPDQLHESAKLIAEGA---GV-SEY 216 (310)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGGG-GTCCHHHHHHHHHHHHHHHH---TC-SCE
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecCCCchhhcc-CCCChHHHHHHHHHHHHHHc---CC-CCE
Confidence 99999999999999999999999987643 2457999999999999985 69999999999999999999 76 689
Q ss_pred eEEEecC-ccCCCCCCCcHHHHHHHhhhc-CCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHH
Q 012639 317 TLAYQSR-VGPVKWLKPYTDEVLVELGQK-GVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPS 394 (459)
Q Consensus 317 ~lafQSr-~G~~~WL~P~t~d~L~~L~~~-G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p~ 394 (459)
.++|||+ +|+.+||+|+|+++|++|+++ |+|+|+|+||||++||+|||+|||+|+++.|++.|. +|.|+||||+||.
T Consensus 217 ~~~fqSrg~g~~~Wl~P~~~~~l~~l~~~~G~k~v~V~P~~F~sD~lEtl~ei~~e~~e~~~~~G~-~~~~~p~ln~~p~ 295 (310)
T 2h1v_A 217 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVVTDDIGA-SYYRPEMPNAKPE 295 (310)
T ss_dssp EEEEESCCCCSSCBSSCBHHHHHHHHHHHHCCSEEEEECTTCCSSCHHHHTTTTTHHHHHHHHHTC-EEECCCCCTTCHH
T ss_pred EEEEEcCCCCCCCcCCCCHHHHHHHHHHHcCCceEEEECCcccccceeeHHHHHHHHHHHHHHcCC-eEEECCCCCCCHH
Confidence 9999997 999999999999999999999 999999999999999999999999999999999995 6999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 012639 395 FITDLADAVIEALP 408 (459)
Q Consensus 395 fi~aLadlV~e~l~ 408 (459)
|+++|+++|.++++
T Consensus 296 ~i~~l~~~v~~~l~ 309 (310)
T 2h1v_A 296 FIDALATVVLKKLG 309 (310)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999864
No 4
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=100.00 E-value=4.2e-33 Score=273.35 Aligned_cols=220 Identities=18% Similarity=0.190 Sum_probs=177.8
Q ss_pred HHHHHHHHhcCCCceEEeeeec------------cCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHHHH--
Q 012639 161 QALKTALEAKNLPVNVYVGMRY------------WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNI-- 226 (459)
Q Consensus 161 ~~L~~~L~~~~~~~~V~~amrY------------~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~-- 226 (459)
+++++.|.+..+++.|+.||.+ ++|+++++|++|+++|+++|+|+|||| ++|+.++++.+.
T Consensus 29 ~~~~~~l~~~~~~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~~ivV~Pl~l-----~~G~~~~di~~~~~ 103 (269)
T 2xvy_A 29 DKMGDRVRAAHPDIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHT-----IPGEEFHGLLETAH 103 (269)
T ss_dssp HHHHHHHHHHCTTSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCCEEEEEECCS-----SSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCCEEEEEecee-----eccHhHHHHHHHHH
Confidence 3344444444457899999997 899999999999999999999999998 367788888887
Q ss_pred -HHHhccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHH
Q 012639 227 -FREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQ 305 (459)
Q Consensus 227 -~~~~~~~~~~~~~~i~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e 305 (459)
+++... ..+.++++++|++||.|+++++++|++.+.... +++..||||+||+|. .+|++.. ++++++.+
T Consensus 104 ~l~~~~~-~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~~~-~~~~~lll~~HGs~~-----~~~~~~~---~~a~~l~~ 173 (269)
T 2xvy_A 104 AFQGLPK-GLTRVSVGLPLIGTTADAEAVAEALVASLPADR-KPGEPVVFMGHGTPH-----PADICYP---GLQYYLWR 173 (269)
T ss_dssp HHTTCTT-SCSEEEEECCSSCSHHHHHHHHHHHHHHSCTTC-CTTCCEEEEECCCSS-----GGGGHHH---HHHHHHHT
T ss_pred HHHHhhc-cCCeEEEeCCCCCCHHHHHHHHHHHHHhchhhc-cCCceEEEEECCCCh-----hhccHHH---HHHHHHHh
Confidence 443221 125799999999999999999999999886421 234689999999996 2454432 34555532
Q ss_pred HHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHhhhcCCceEEEEcccccc-cchh--hhHhHHHHHHHHHHHcCCee
Q 012639 306 RLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVS-EHIE--TLEEIDMEYKELALESGIEN 382 (459)
Q Consensus 306 ~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvs-DhlE--TL~EidiE~ke~a~e~G~~~ 382 (459)
+ | ..+| +|+.+| +|+++++|++|.++|+|+|+|+|++|++ ||+| +..|++.++++.+.+.|++.
T Consensus 174 -~---~-----~~~~---~g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~~G~h~~~di~~~~~~~~~~~~~~~g~~~ 240 (269)
T 2xvy_A 174 -L---D-----PDLL---VGTVEG-SPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAGDEDDSWTSQLARRGIEA 240 (269)
T ss_dssp -T---C-----TTEE---EEESSS-SSCHHHHHHHHHHHTCSEEEEEEESSSCCHHHHTTTTCSSTTSHHHHHHHTTCEE
T ss_pred -c---C-----CCEE---EEEcCC-CCCHHHHHHHHHHCCCCEEEEECCccccccchhhhcCCCchhHHHHHHHHcCcEE
Confidence 2 3 2455 456679 8999999999999999999999999996 9999 77888889999999999987
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHHcC
Q 012639 383 WGRVPALNCTPSFITDLADAVIEALP 408 (459)
Q Consensus 383 ~~rvp~LNd~p~fi~aLadlV~e~l~ 408 (459)
+.++||||+||.|+++|++++.+++.
T Consensus 241 ~~~~~~Lg~~p~~~~~l~~~~~~a~~ 266 (269)
T 2xvy_A 241 KPVLHGTAESDAVAAIWLRHLDDALA 266 (269)
T ss_dssp EECCCCGGGCHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 77999999999999999999998764
No 5
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=99.96 E-value=7.6e-30 Score=269.27 Aligned_cols=237 Identities=15% Similarity=0.118 Sum_probs=195.1
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHhcCC-----CceEEeeeeccCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHH
Q 012639 146 IGGGSPLRKITDEQAQALKTALEAKNL-----PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSI 220 (459)
Q Consensus 146 IgggSPL~~~T~~qa~~L~~~L~~~~~-----~~~V~~amrY~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~ 220 (459)
+|-|||+...++++.++|++.|.+.++ ...|++||..++|+++++|++| |+++|+++|+|++++..+.
T Consensus 9 VgHGSp~~~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle~~PsI~eaL~~L---G~~rVvVvPLfl~~G~H~~---- 81 (474)
T 2jh3_A 9 IGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTV---AYSDVTVVPVFLSEGYVTE---- 81 (474)
T ss_dssp EECCCSSCTHHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESSSSSBTTTGGGGC---CBSEEEEEECCSCCSHHHH----
T ss_pred EeCCCCCChhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcCCCCCHHHHHHHc---CcCeEEEEEEehhccHhHH----
Confidence 477899989999999999999977655 6889999988999999999999 9999999999998766544
Q ss_pred HHHHHHHHHhc-----------cCCCCcEEEecCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccC
Q 012639 221 RVLQNIFREDA-----------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAG 289 (459)
Q Consensus 221 ~~l~~~~~~~~-----------~~~~~~~~~i~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~G 289 (459)
+++.+.+.+.. ..+.+.++++++|++||.++++++++|+++++.-..++++.|||++
T Consensus 82 ~DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~g~~~~~~avvlvg------------ 149 (474)
T 2jh3_A 82 TVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPEGTDPADVTLLLLA------------ 149 (474)
T ss_dssp THHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCTTCCGGGCEEEEEE------------
T ss_pred HHHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhhccCcccceEEEec------------
Confidence 34555444321 1345678999999999999999999999998651123456788887
Q ss_pred Cc-cHHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccC-----CCCCCCcHHHHHHHhhhcCCceEEEEcccccccchhh
Q 012639 290 DP-YRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGP-----VKWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIET 363 (459)
Q Consensus 290 Dp-Y~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~G~-----~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlET 363 (459)
|| |..++.++++++.+++ |+ .+|.++|||+ +| .+||+|++++++++| |+|+|+|+|+ |++||+||
T Consensus 150 dp~a~~~~~~la~~L~e~l---g~-~~v~vaf~s~-~Pwl~P~~~wleP~l~d~l~~L---G~krVvV~P~-Fl~dG~h~ 220 (474)
T 2jh3_A 150 ARPGNAALETHAQALRERG---QF-AGVEVVLESR-EALTPESHAASAVPLSEWPSRV---EAGQAVLVPF-LTHLGKHA 220 (474)
T ss_dssp SSTTCHHHHHHHHHHHHHC---CS-SEEEEEECCC-C---------CCEEGGGGGGGC---CSSCEEEEEC-SSCCCHHH
T ss_pred CchHHHHHHHHHHHHHHhc---CC-CcEEEEEEeC-CCCCCcccccccCCHHHHHHHc---CCCeEEEEEe-eccCCcch
Confidence 34 4789999999999998 76 4799999998 55 468888999999998 9999999998 99999999
Q ss_pred hHhHHHHHHHHHHH--cCCeeEEEcCCCCCCHHHHHHHHHHHHHHcCCcc
Q 012639 364 LEEIDMEYKELALE--SGIENWGRVPALNCTPSFITDLADAVIEALPSAL 411 (459)
Q Consensus 364 L~EidiE~ke~a~e--~G~~~~~rvp~LNd~p~fi~aLadlV~e~l~~~~ 411 (459)
++||+.+.++...+ .|. .+.++++||++|.|++++++++.+++.+..
T Consensus 221 ~~DI~~~~~~~~~~~p~G~-~v~~~~~LG~~p~~~~ll~~rv~eal~~~~ 269 (474)
T 2jh3_A 221 AERLQQALAQAAERFPQAP-PLHVGGPVGEHPAVAEVVLALAAEGREDER 269 (474)
T ss_dssp HHHHHHHHHHHHHHCTTCC-CEEECCCGGGSTTHHHHHHHHHHTTCSCSC
T ss_pred HHHHHHHHHHHHHhccCCc-EEEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 99999998766555 465 589999999999999999999999987653
No 6
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=99.95 E-value=1e-26 Score=228.21 Aligned_cols=230 Identities=14% Similarity=0.204 Sum_probs=183.8
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEeee-----------ec--cCCCHHHHHHHHHHCCCCEEEEEecCCcccc
Q 012639 147 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGM-----------RY--WYPFTEEAVQQIKRDRITRLVVLPLYPQFSI 213 (459)
Q Consensus 147 gggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~am-----------rY--~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~ 213 (459)
+-||....+.++..+++.+.+.+..+++.|+.|| || ..|+++++|++|.++|+++|+|+|||+
T Consensus 9 ~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl~l---- 84 (264)
T 2xwp_A 9 SFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHI---- 84 (264)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEECCS----
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeCcc----
Confidence 4567666665545566666666656789999999 44 459999999999999999999999997
Q ss_pred CChhhHHHHHHHHHHHhcc-CCCCcEEEecCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccCCcc
Q 012639 214 STTGSSIRVLQNIFREDAY-LSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPY 292 (459)
Q Consensus 214 ~Ttgs~~~~l~~~~~~~~~-~~~~~~~~i~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY 292 (459)
+.|+.++++.+.+++... ++ .+++.++++.+|.+++++++.|++.+... +++..|||++||+|.. +++|
T Consensus 85 -~~G~~~~di~~~v~~~~~~~~--~i~~~~pl~~~~~~~~~l~~~l~~~~~~~--~~~~~lvl~gHGs~~~-----~~~~ 154 (264)
T 2xwp_A 85 -INGDEYEKIVREVQLLRPLFT--RLTLGVPLLSSHNDYVQLMQALRQQMPSL--RQTEKVVFMGHGASHH-----AFAA 154 (264)
T ss_dssp -SSSHHHHHHHHHHHHHGGGCS--EEEEECCSSCSHHHHHHHHHHHHTTSCCC--CTTEEEEEEECCCSSG-----GGHH
T ss_pred -cCcHHHHHHHHHHHHHHhhCC--ceEEecCCCCCHHHHHHHHHHHHHhcccc--CCCCeEEEEECCCCch-----hhHH
Confidence 578888899888776542 23 68899999999999999999998876543 2456899999999864 3344
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHhhhcCCceEEEEcccccc-cchhhhHhHHHH-
Q 012639 293 RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPVSFVS-EHIETLEEIDME- 370 (459)
Q Consensus 293 ~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvPigFvs-DhlETL~EidiE- 370 (459)
. . +.+.+++++ |. .+ ++|..+| +|++++++++|.++|+|+|+|+|++|++ ||+ ..||..+
T Consensus 155 ~---~-~~a~~l~~~---~~--~v------~~g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~aG~h~--~~Di~~~~ 216 (264)
T 2xwp_A 155 Y---A-CLDHMMTAQ---RF--PA------RVGAVES-YPEVDILIDSLRDEGVTGVHLMPLMLVAGDHA--INDMASDD 216 (264)
T ss_dssp H---H-HHHHHHHHT---TC--SE------EEEESSS-SSCHHHHHHHHHHHTCCEEEEEECSSCCCHHH--HHHHHSSS
T ss_pred H---H-HHHHHHHhh---CC--CE------EEEEeCC-CCCHHHHHHHHHHCCCCEEEEEeeecccCcch--hhhccccc
Confidence 2 2 333333333 42 33 4455678 9999999999999999999999999999 999 7788876
Q ss_pred ---HHHHHHHcCCeeEEEcCCCCCCHHHHHHHHHHHHHHcC
Q 012639 371 ---YKELALESGIENWGRVPALNCTPSFITDLADAVIEALP 408 (459)
Q Consensus 371 ---~ke~a~e~G~~~~~rvp~LNd~p~fi~aLadlV~e~l~ 408 (459)
.++.+.+.|++...++++||+||.+++++++++.+.+.
T Consensus 217 ~d~~~~~~~~~g~~~~~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 217 GDSWKMRFNAAGIPATPWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp TTSHHHHHHHTTCCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHcCCeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence 68888899998777899999999999999999999875
No 7
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=99.10 E-value=1.2e-09 Score=94.86 Aligned_cols=116 Identities=18% Similarity=0.311 Sum_probs=88.6
Q ss_pred eEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHhhhcCCceEE
Q 012639 271 VMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLL 350 (459)
Q Consensus 271 ~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~Vv 350 (459)
..||+++||++... -...+.+.++.+.++ . .++.++|- ++-.|+++++|++|.++|+++|+
T Consensus 6 ~alllv~HGS~~~~-------~~~~~~~l~~~l~~~----~--~~V~~a~l------e~~~P~l~~~l~~l~~~G~~~vv 66 (126)
T 3lyh_A 6 HQIILLAHGSSDAR-------WCETFEKLAEPTVES----I--ENAAIAYM------ELAEPSLDTIVNRAKGQGVEQFT 66 (126)
T ss_dssp EEEEEEECCCSCHH-------HHHHHHHHHHHHHHH----S--TTCEEEES------SSSSSBHHHHHHHHHHTTCCEEE
T ss_pred cEEEEEeCCCCCHH-------HHHHHHHHHHHHHhh----c--CCEEEEEE------eCCCCCHHHHHHHHHHcCCCEEE
Confidence 57999999985321 133344455555444 3 36788884 35679999999999999999999
Q ss_pred EEcccccc-cchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHHHHHHHHHHHHHHcC
Q 012639 351 AIPVSFVS-EHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEALP 408 (459)
Q Consensus 351 VvPigFvs-DhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p~fi~aLadlV~e~l~ 408 (459)
|+|+.++. +|. ..||..+..+...+.|. .+.+.+.|+++|.+++++++++.+++.
T Consensus 67 vvPlfl~~G~H~--~~Dip~~~~~~~~~~~~-~i~~~~~LG~~p~l~~~l~~ri~~al~ 122 (126)
T 3lyh_A 67 VVPLFLAAGRHL--RKDVPAMIERLEAEHGV-TIRLAEPIGKNPRLGLAIRDVVKEELE 122 (126)
T ss_dssp EEECCSCCCHHH--HHHHHHHHHHHHHHHTC-EEEECCCGGGSHHHHHHHHHHHHHHHH
T ss_pred EEecccCCCchh--hhHHHHHHHHHHHHhCc-eEEEcCCCCCChHHHHHHHHHHHHHHh
Confidence 99997777 666 67777777665545566 588999999999999999999999875
No 8
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=98.99 E-value=2.7e-09 Score=92.72 Aligned_cols=110 Identities=13% Similarity=0.147 Sum_probs=81.7
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEeee-eccCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHHH
Q 012639 147 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGM-RYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQN 225 (459)
Q Consensus 147 gggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~am-rY~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~ 225 (459)
|-||+-..+ .+..+.+.+.|.+.. ..|+.|| .++.|++++++++|.++|+++|+++|+|+.....+. +++.+
T Consensus 12 ~HGS~~~~~-~~~~~~l~~~l~~~~--~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlfl~~G~H~~----~Dip~ 84 (126)
T 3lyh_A 12 AHGSSDARW-CETFEKLAEPTVESI--ENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLAAGRHLR----KDVPA 84 (126)
T ss_dssp ECCCSCHHH-HHHHHHHHHHHHHHS--TTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECCSCCCHHHH----HHHHH
T ss_pred eCCCCCHHH-HHHHHHHHHHHHhhc--CCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecccCCCchhh----hHHHH
Confidence 556765443 335566666665554 4688885 889999999999999999999999999987654443 44444
Q ss_pred HHHHhc-cCCCCcEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 012639 226 IFREDA-YLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 264 (459)
Q Consensus 226 ~~~~~~-~~~~~~~~~i~~~~~~p~yI~ala~~I~~~l~~ 264 (459)
.+.+.. .+ ++.+++.++++.+|.++++++++|++++..
T Consensus 85 ~~~~~~~~~-~~~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 85 MIERLEAEH-GVTIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp HHHHHHHHH-TCEEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-CceEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 333211 12 467888999999999999999999999864
No 9
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.90 E-value=7.4e-10 Score=100.30 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=78.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEee-eec-cCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHH
Q 012639 147 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ 224 (459)
Q Consensus 147 gggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~a-mrY-~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~ 224 (459)
|=||+-..+ .+..+++.+.|.+..+...|++| |.| +.|++++++++| |+++|+|+|+|++++..+.. ++.
T Consensus 31 ~HGS~~p~~-~~~~~~la~~l~~~~~~~~V~~afle~~~~Psl~~~l~~l---G~~~VvVvPlfL~~G~h~~~----DIp 102 (156)
T 1tjn_A 31 GHGSQLNHY-REVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVTE----DLP 102 (156)
T ss_dssp ECCTTSTTH-HHHHHHHHHHHHHHTSSSEEEEEECSSSCSSCHHHHHHHC---CCSEEEEEECCSSCSHHHHT----HHH
T ss_pred ECCCCCHHH-HHHHHHHHHHHHhhCCCCeEEEEEecCCCCCCHHHHHHHc---CCCEEEEEechhcCCchhHh----HHH
Confidence 555654322 23344444555444445789999 688 999999999999 99999999999987665554 444
Q ss_pred HHHHHhc-------cCCCCcEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 012639 225 NIFREDA-------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 264 (459)
Q Consensus 225 ~~~~~~~-------~~~~~~~~~i~~~~~~p~yI~ala~~I~~~l~~ 264 (459)
+.+.+.. ..+.+.+.+.++++.+|.++++++++|+++++.
T Consensus 103 ~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~ 149 (156)
T 1tjn_A 103 DLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 149 (156)
T ss_dssp HHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC--
T ss_pred HHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhc
Confidence 4443211 234667889999999999999999999887654
No 10
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=98.88 E-value=7.2e-09 Score=90.30 Aligned_cols=117 Identities=15% Similarity=0.117 Sum_probs=82.6
Q ss_pred eEEEEeeCCCchhhccccCCcc-HHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHhhhcCCceE
Q 012639 271 VMIFFSAHGVPVSYVEKAGDPY-RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSL 349 (459)
Q Consensus 271 ~~LLFSaHGlP~~~v~~~GDpY-~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~V 349 (459)
..||+++||++. |. ...+.+.++.+.+++ +. .++.++|-+. |-.|+++++|++| |+++|
T Consensus 4 ~alllv~HGS~~--------~~~~~~~~~la~~l~~~~---~~-~~V~~a~le~-----~~~Psl~~~l~~l---g~~~v 63 (133)
T 2xws_A 4 RGLVIVGHGSQL--------NHYREVMELHRKRIEESG---AF-DEVKIAFAAR-----KRRPMPDEAIREM---NCDII 63 (133)
T ss_dssp EEEEEEECSCCC--------HHHHHHHHHHHHHHHHHT---SS-SEEEEEESST-----TCSSCHHHHHHHC---CCSEE
T ss_pred ceEEEEECCCCC--------HHHHHHHHHHHHHHHhhC---CC-CcEEeeeeec-----CCCCCHHHHHHHc---CCCEE
Confidence 479999999842 32 334455566666554 32 3678888662 4579999999999 99999
Q ss_pred EEEcccccc-cchhhhHhHHHHHHHHHH------HcCCeeEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 012639 350 LAIPVSFVS-EHIETLEEIDMEYKELAL------ESGIENWGRVPALNCTPSFITDLADAVIEALPS 409 (459)
Q Consensus 350 vVvPigFvs-DhlETL~EidiE~ke~a~------e~G~~~~~rvp~LNd~p~fi~aLadlV~e~l~~ 409 (459)
+|+|+.++. +|. ..||..+..+..+ ......+.+.+.|+++|.+++++++++.+.+..
T Consensus 64 ~v~Plfl~~G~h~--~~di~~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 64 YVVPLFISYGLHV--TEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp EEEECCSSCCHHH--HTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred EEEeeeeCCCcch--HhHHHHHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 999996655 444 6666555443221 222346789999999999999999999887653
No 11
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=98.88 E-value=1.4e-09 Score=94.91 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=80.0
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEee-eec-cCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHH
Q 012639 147 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVG-MRY-WYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQ 224 (459)
Q Consensus 147 gggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~a-mrY-~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~ 224 (459)
|-||+-... .+..+++.+.|.+..+...|++| |.| +.|++++++++| |+++|+++|+|++++..+.. ++.
T Consensus 10 ~HGS~~~~~-~~~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~l---g~~~v~v~Plfl~~G~h~~~----di~ 81 (133)
T 2xws_A 10 GHGSQLNHY-REVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYGLHVTE----DLP 81 (133)
T ss_dssp ECSCCCHHH-HHHHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHC---CCSEEEEEECCSSCCHHHHT----HHH
T ss_pred ECCCCCHHH-HHHHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHc---CCCEEEEEeeeeCCCcchHh----HHH
Confidence 556664333 33555666666655556789999 588 999999999999 99999999999876554443 455
Q ss_pred HHHHHhc-------cCCCCcEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 012639 225 NIFREDA-------YLSRLPVSIIRSWYQREGYVNSMADLIQKELGK 264 (459)
Q Consensus 225 ~~~~~~~-------~~~~~~~~~i~~~~~~p~yI~ala~~I~~~l~~ 264 (459)
+.+.+.. ..+.+.+.+.++++.+|.++++++++|+++++.
T Consensus 82 ~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 82 DLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp HHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred HHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 5443321 234567889999999999999999999877643
No 12
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.76 E-value=3.2e-08 Score=89.46 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=84.6
Q ss_pred eEEEEeeCCCchhhccccCCcc-HHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHhhhcCCceE
Q 012639 271 VMIFFSAHGVPVSYVEKAGDPY-RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSL 349 (459)
Q Consensus 271 ~~LLFSaHGlP~~~v~~~GDpY-~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~V 349 (459)
..||+++||.+ ||. ...+.+.++.+.+++ +. .++.++|-..+ -.|+++++|++| |+++|
T Consensus 25 ~avlLv~HGS~--------~p~~~~~~~~la~~l~~~~---~~-~~V~~afle~~-----~~Psl~~~l~~l---G~~~V 84 (156)
T 1tjn_A 25 RGLVIVGHGSQ--------LNHYREVMELHRKRIEESG---AF-DEVKIAFAARK-----RRPMPDEAIREM---NCDII 84 (156)
T ss_dssp EEEEEEECCTT--------STTHHHHHHHHHHHHHHHT---SS-SEEEEEECSSS-----CSSCHHHHHHHC---CCSEE
T ss_pred cCEEEEECCCC--------CHHHHHHHHHHHHHHHhhC---CC-CeEEEEEecCC-----CCCCHHHHHHHc---CCCEE
Confidence 58999999984 333 445566666676665 32 36788886521 269999999999 99999
Q ss_pred EEEcccccc-cchhhhHhHHHHHHHHHH------HcCCeeEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 012639 350 LAIPVSFVS-EHIETLEEIDMEYKELAL------ESGIENWGRVPALNCTPSFITDLADAVIEALPS 409 (459)
Q Consensus 350 vVvPigFvs-DhlETL~EidiE~ke~a~------e~G~~~~~rvp~LNd~p~fi~aLadlV~e~l~~ 409 (459)
+|+|+.++. +|. -.||..+..+..+ +.....+.+.+.|+++|.+++++++++.+.+..
T Consensus 85 vVvPlfL~~G~h~--~~DIp~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~ 149 (156)
T 1tjn_A 85 YVVPLFISYGLHV--TEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 149 (156)
T ss_dssp EEEECCSSCSHHH--HTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC--
T ss_pred EEEechhcCCchh--HhHHHHHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhc
Confidence 999998877 666 5566555443221 122336789999999999999999999987653
No 13
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=98.48 E-value=1.2e-06 Score=85.32 Aligned_cols=126 Identities=13% Similarity=0.148 Sum_probs=89.5
Q ss_pred ceEEEEeeCCCchhhccccCCcc-HHHHHHHHHHHHHHHhhcCCCCCeeEEEecCc-----cCCCCCCCcHHHHHHHhhh
Q 012639 270 EVMIFFSAHGVPVSYVEKAGDPY-RDQMEECIYLIMQRLKDRGINNDHTLAYQSRV-----GPVKWLKPYTDEVLVELGQ 343 (459)
Q Consensus 270 ~~~LLFSaHGlP~~~v~~~GDpY-~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~-----G~~~WL~P~t~d~L~~L~~ 343 (459)
+..||+.+||+. ||. ...+.+.++.+.+++ + ..+++.+|-|+. -...|-.|++.++|++|.+
T Consensus 9 ~~aillv~hGS~--------~~~~~~~~~~~~~~l~~~~---~-~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~ 76 (269)
T 2xvy_A 9 KTGILLVAFGTS--------VEEARPALDKMGDRVRAAH---P-DIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAE 76 (269)
T ss_dssp CEEEEEEECCCC--------CTTTTHHHHHHHHHHHHHC---T-TSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHH
T ss_pred CceEEEEeCCCC--------cHHHHHHHHHHHHHHHHHC---C-CCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 358999999983 222 235555556666654 1 236888997721 0012668999999999999
Q ss_pred cCCceEEEEcccccccchhhhHhHHHHHHHHHH-HcCCeeEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 012639 344 KGVKSLLAIPVSFVSEHIETLEEIDMEYKELAL-ESGIENWGRVPALNCTPSFITDLADAVIEALPS 409 (459)
Q Consensus 344 ~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~-e~G~~~~~rvp~LNd~p~fi~aLadlV~e~l~~ 409 (459)
+|+++|+|+|...++.+ +..||.....++.. ..+...+..++.+++||.+++++++.+.+++..
T Consensus 77 ~G~~~ivV~Pl~l~~G~--~~~di~~~~~~l~~~~~~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~ 141 (269)
T 2xvy_A 77 EGFTHVAVQSLHTIPGE--EFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTADAEAVAEALVASLPA 141 (269)
T ss_dssp TTCCEEEEEECCSSSSH--HHHHHHHHHHHHTTCTTSCSEEEEECCSSCSHHHHHHHHHHHHHHSCT
T ss_pred CCCCEEEEEeceeeccH--hHHHHHHHHHHHHHhhccCCeEEEeCCCCCCHHHHHHHHHHHHHhchh
Confidence 99999999999888776 35555444222221 123357899999999999999999999998853
No 14
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=98.05 E-value=2.3e-05 Score=76.32 Aligned_cols=123 Identities=15% Similarity=0.102 Sum_probs=84.3
Q ss_pred eEEEEeeCCCchhhccccCCcc-HH-HHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCC------CCCCcHHHHHHHhh
Q 012639 271 VMIFFSAHGVPVSYVEKAGDPY-RD-QMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVK------WLKPYTDEVLVELG 342 (459)
Q Consensus 271 ~~LLFSaHGlP~~~v~~~GDpY-~~-q~~~t~~~v~e~L~~~g~~~~~~lafQSr~G~~~------WL~P~t~d~L~~L~ 342 (459)
..||+++||+- ||. .. .++..++.+.+++ . ..+++.+|-|+.=..+ ...|++.++|++|.
T Consensus 3 ~aillv~hGSr--------~~~~~~~~~~~~~~~v~~~~---p-~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~ 70 (264)
T 2xwp_A 3 KALLVVSFGTS--------YHDTCEKNIVACERDLAASC---P-DRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLA 70 (264)
T ss_dssp EEEEEEECCCS--------CHHHHHHHHHHHHHHHHHHC---T-TSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_pred ceEEEEECCCC--------CHHHHHHHHHHHHHHHHHHC---C-CCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 47899999982 333 22 3444444444443 1 1367889966310011 24699999999999
Q ss_pred hcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 012639 343 QKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEALPS 409 (459)
Q Consensus 343 ~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p~fi~aLadlV~e~l~~ 409 (459)
++|+++|+|+|..++..+ | ..||-.+.++... +...+.+.+.|..+|..++.+++.+.+.+..
T Consensus 71 ~~G~~~vvV~Pl~l~~G~-~-~~di~~~v~~~~~--~~~~i~~~~pl~~~~~~~~~l~~~l~~~~~~ 133 (264)
T 2xwp_A 71 AQGYQDVAIQSLHIINGD-E-YEKIVREVQLLRP--LFTRLTLGVPLLSSHNDYVQLMQALRQQMPS 133 (264)
T ss_dssp HHTCCEEEEEECCSSSSH-H-HHHHHHHHHHHGG--GCSEEEEECCSSCSHHHHHHHHHHHHTTSCC
T ss_pred hCCCCEEEEEeCcccCcH-H-HHHHHHHHHHHHh--hCCceEEecCCCCCHHHHHHHHHHHHHhccc
Confidence 999999999999887754 3 3466555444422 2336788999999999999999999988764
No 15
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=98.01 E-value=4.3e-06 Score=88.31 Aligned_cols=120 Identities=13% Similarity=0.092 Sum_probs=82.0
Q ss_pred eEEEEeeCCCchhhccccCCcc-HHHHHHHHHHHHHHHhhcCC-CCCeeEEEecCccCCCCCCCcHHHHHHHhhhcCCce
Q 012639 271 VMIFFSAHGVPVSYVEKAGDPY-RDQMEECIYLIMQRLKDRGI-NNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKS 348 (459)
Q Consensus 271 ~~LLFSaHGlP~~~v~~~GDpY-~~q~~~t~~~v~e~L~~~g~-~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~ 348 (459)
..||+++||+|.. ++ ..++.+.++.+.++.....+ ..++.++|-+ ..|+++++|++| |+++
T Consensus 4 ~alLLVgHGSp~~-------~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle-------~~PsI~eaL~~L---G~~r 66 (474)
T 2jh3_A 4 RSLVLIGHGSHHH-------GESARATQQVAEALRGRGLAGHLPYDEVLEGYWQ-------QEPGLRQVLRTV---AYSD 66 (474)
T ss_dssp CEEEEEECCCSSC-------THHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESS-------SSSBTTTGGGGC---CBSE
T ss_pred ceEEEEeCCCCCC-------hhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcC-------CCCCHHHHHHHc---CcCe
Confidence 4799999999742 23 34445555555544310001 1256677755 279999999999 9999
Q ss_pred EEEEcccccc-cchhhhHhHHHHHHHHH----------HHcCCeeEEEcCCCCCCHHHHHHHHHHHHHHcCC
Q 012639 349 LLAIPVSFVS-EHIETLEEIDMEYKELA----------LESGIENWGRVPALNCTPSFITDLADAVIEALPS 409 (459)
Q Consensus 349 VvVvPigFvs-DhlETL~EidiE~ke~a----------~e~G~~~~~rvp~LNd~p~fi~aLadlV~e~l~~ 409 (459)
|+|+|..++. .|. -.||..+..+.. +..+...+..++.|++||.+++++++.|.+++..
T Consensus 67 VvVvPLfl~~G~H~--~~DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~ 136 (474)
T 2jh3_A 67 VTVVPVFLSEGYVT--ETVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPE 136 (474)
T ss_dssp EEEEECCSCCSHHH--HTHHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCT
T ss_pred EEEEEEehhccHhH--HHHHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhh
Confidence 9999987776 555 445544433221 1233446899999999999999999999998865
No 16
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=97.97 E-value=3.6e-05 Score=76.90 Aligned_cols=109 Identities=17% Similarity=0.233 Sum_probs=76.5
Q ss_pred eCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCC--CCCeeEEEecCccCCCCCCCcHHHHHHHhhhcCCceEEEEcc
Q 012639 277 AHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGI--NNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGVKSLLAIPV 354 (459)
Q Consensus 277 aHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~--~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvPi 354 (459)
+||.|+... . ++-++.+.++|..++. ..++.+++ +. -.|+++|+|++|.++|+++|+|+|.
T Consensus 51 g~gSPl~~~-------t---~~q~~~L~~~L~~~~~~~~~~V~~am--ry-----~~P~i~~~l~~l~~~G~~~ivvlPl 113 (310)
T 2h1v_A 51 GGISPLAQI-------T---EQQAHNLEQHLNEIQDEITFKAYIGL--AH-----IEPFIEDAVAEMHKDGITEAVSIVL 113 (310)
T ss_dssp TCSHHHHHH-------H---HHHHHHHHHHHHHHCSSEEEEEEEEE--SS-----SSSBHHHHHHHHHHTTCCEEEEEES
T ss_pred CCCChhHHH-------H---HHHHHHHHHHHHhcCCCCCceEeehh--cC-----CCCCHHHHHHHHHhcCCCEEEEEEC
Confidence 688886532 1 2334455555533231 11344444 22 3899999999999999999999999
Q ss_pred c-----ccccchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHHHHHHHHHHHHHHcC
Q 012639 355 S-----FVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIEALP 408 (459)
Q Consensus 355 g-----FvsDhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p~fi~aLadlV~e~l~ 408 (459)
. +++.+. ..++....++ .+.-.+..++.+.+||.+|+++++.|.+++.
T Consensus 114 ~pq~s~st~g~~--~~~i~~~l~~----~~~~~i~~i~~~~~~p~~i~a~a~~i~~~l~ 166 (310)
T 2h1v_A 114 APHFSTFSVQSY--NKRAKEEAEK----LGGLTITSVESWYDEPKFVTYWVDRVKETYA 166 (310)
T ss_dssp SSSCCTTTHHHH--HHHHHHHHHH----HCSCEEEECCCCTTCHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhHHHH--HHHHHHHHHh----CCCCeEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 8 566665 6666444432 2334799999999999999999999998875
No 17
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=97.89 E-value=6.2e-05 Score=76.91 Aligned_cols=77 Identities=21% Similarity=0.322 Sum_probs=61.6
Q ss_pred CCCcHHHHHHHhhhcCCceEEEEcccc-----cccchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHHHHHHHHHHHH
Q 012639 330 LKPYTDEVLVELGQKGVKSLLAIPVSF-----VSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVI 404 (459)
Q Consensus 330 L~P~t~d~L~~L~~~G~k~VvVvPigF-----vsDhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p~fi~aLadlV~ 404 (459)
-.|+++|+|+++.++|+++|+|+|..- ++.|. ..++....++.....++ .+..++...+||.||+++++.|.
T Consensus 107 ~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~--~~~i~~~l~~~~~~~~i-~i~~i~~~~~~p~~I~ala~~I~ 183 (362)
T 1lbq_A 107 AKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSS--INELWRQIKALDSERSI-SWSVIDRWPTNEGLIKAFSENIT 183 (362)
T ss_dssp SSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHH--HHHHHHHHHHHCTTCCS-EEEEECCCTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHH--HHHHHHHHHhcccCCCc-eEEEecCCCCCHHHHHHHHHHHH
Confidence 379999999999999999999999852 44566 77776555554222344 57899999999999999999999
Q ss_pred HHcCC
Q 012639 405 EALPS 409 (459)
Q Consensus 405 e~l~~ 409 (459)
+++..
T Consensus 184 ~~l~~ 188 (362)
T 1lbq_A 184 KKLQE 188 (362)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98764
No 18
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=97.37 E-value=0.0012 Score=67.46 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=77.0
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCceEEeee--ecc-----CCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhH
Q 012639 147 GGGSPLRKITDEQAQALKTALEAKNLPVNVYVGM--RYW-----YPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSS 219 (459)
Q Consensus 147 gggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~am--rY~-----~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~ 219 (459)
..|.|-....++-+++|.+.|.- +..+.++| |.+ .|+++++|++|.++|+++|+|+|.- |.+-...+.
T Consensus 207 ~~GDpY~~q~~~t~~lv~e~Lg~---~~~~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~g--FvsD~lETL 281 (359)
T 3hcn_A 207 NRGDPYPQEVSATVQKVMERLEY---CNPYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIA--FTSDHIETL 281 (359)
T ss_dssp TTTCSHHHHHHHHHHHHHHHTTT---CSCEEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECTT--CCSCCCCCH
T ss_pred ccCCCHHHHHHHHHHHHHHHcCC---CCCEEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCc--cchhhHHhH
Confidence 34678777777777777777742 22344555 444 7999999999999999999999963 443333333
Q ss_pred HHHHHHHH-HHh-ccCCCC-cEEEecCCCCCHHHHHHHHHHHHHHHhh
Q 012639 220 IRVLQNIF-RED-AYLSRL-PVSIIRSWYQREGYVNSMADLIQKELGK 264 (459)
Q Consensus 220 ~~~l~~~~-~~~-~~~~~~-~~~~i~~~~~~p~yI~ala~~I~~~l~~ 264 (459)
. ++...+ ++. .. .++ .+..++...++|.||+++++.|++.++.
T Consensus 282 ~-Eid~E~~~e~a~e-~G~~~~~rip~LNd~p~fi~~La~lv~~~l~~ 327 (359)
T 3hcn_A 282 Y-ELDIEYSQVLAKE-CGVENIRRAESLNGNPLFSKALADLVHSHIQS 327 (359)
T ss_dssp H-HHCHHHHHHHHHH-TCCCEEEECCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHh-CCCceEEEcCCCCCCHHHHHHHHHHHHHHHhc
Confidence 2 332221 111 11 234 5999999999999999999999999875
No 19
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=59.97 E-value=7.4 Score=36.72 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=25.5
Q ss_pred ceEEEEEccCCCC--CcCcHHHHHHhhcCCCCeeeCCch
Q 012639 83 KVGVLLLNLGGPD--TLHDVQPFLFNLFADPDIIRLPRL 119 (459)
Q Consensus 83 k~aVLLlnlG~P~--s~~dV~~fL~~~l~D~~Vi~lP~~ 119 (459)
..|+ .|+|+|+ |..|+-..+.+.+.-|.++++|.|
T Consensus 211 ~~g~--yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~ 247 (298)
T 4b4o_A 211 VHGV--LNGVAPSSATNAEFAQTFGAALGRRAFIPLPSA 247 (298)
T ss_dssp CCEE--EEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHH
T ss_pred CCCe--EEEECCCccCHHHHHHHHHHHhCcCCcccCCHH
Confidence 3564 5666666 667888888888887777778854
No 20
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=55.76 E-value=1.8e+02 Score=29.55 Aligned_cols=138 Identities=17% Similarity=0.200 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCC
Q 012639 248 EGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPV 327 (459)
Q Consensus 248 p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~G~~ 327 (459)
..|++++.+.|+...+......-..+.|.+ |.|.-. -..++.+..+.+.+.. ++....+++...+.+.
T Consensus 83 ~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgG-Gtpt~l-------~~~~l~~ll~~i~~~~---~~~~~~eitie~~p~~- 150 (457)
T 1olt_A 83 DQYLDALEQEIVHRAPLFAGRHVSQLHWGG-GTPTYL-------NKAQISRLMKLLRENF---QFNADAEISIEVDPRE- 150 (457)
T ss_dssp HHHHHHHHHHHHHHGGGGTTCCEEEEEEEE-SCGGGS-------CHHHHHHHHHHHHHHS---CEEEEEEEEEEECSSS-
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeC-CCcccC-------CHHHHHHHHHHHHHhC---CCCCCcEEEEEEccCc-
Confidence 356777777776655444321112344444 776421 1345666666666553 2222234444443211
Q ss_pred CCCCCcHHHHHHHhhhcCCceEEEEcccccccchhhhHhH--------HHHHHHHHHHcCCe--eEEEcC-CCCCCHHHH
Q 012639 328 KWLKPYTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEI--------DMEYKELALESGIE--NWGRVP-ALNCTPSFI 396 (459)
Q Consensus 328 ~WL~P~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~Ei--------diE~ke~a~e~G~~--~~~rvp-~LNd~p~fi 396 (459)
+ +++.|+.|++.|+.+|-+ .+ =+-+=|+|..| -.+.-+.+.+.|+. +...+- .++++..-+
T Consensus 151 --l---~~e~l~~L~~~G~~risl-Gv--QS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPget~e~~ 222 (457)
T 1olt_A 151 --I---ELDVLDHLRAEGFNRLSM-GV--QDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESF 222 (457)
T ss_dssp --C---CTHHHHHHHHTTCCEEEE-EE--ECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCCHHHH
T ss_pred --C---CHHHHHHHHHcCCCEEEE-ee--ccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCCCCHHHH
Confidence 2 467788888888766554 33 22222234322 23445666778875 333433 347776555
Q ss_pred HHHHHHHHH
Q 012639 397 TDLADAVIE 405 (459)
Q Consensus 397 ~aLadlV~e 405 (459)
....+.+.+
T Consensus 223 ~~tl~~~~~ 231 (457)
T 1olt_A 223 AFTLKRVAE 231 (457)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555555554
No 21
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=54.39 E-value=1.8e+02 Score=29.27 Aligned_cols=69 Identities=14% Similarity=0.099 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHHHHHHHhc----cCCCCcEEEecCCCCCHHHHHHHHHHHHH
Q 012639 186 FTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDA----YLSRLPVSIIRSWYQREGYVNSMADLIQK 260 (459)
Q Consensus 186 ~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~~~~~~----~~~~~~~~~i~~~~~~p~yI~ala~~I~~ 260 (459)
.+..+|+++.+-.++ ++.|.+-. .-... ..++-+.++++. ....+.+-+..-|+......+++++.|.+
T Consensus 220 ~v~~~L~kl~~Ldi~--~I~P~HGp---i~r~~-~~~ii~~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~ 292 (410)
T 4dik_A 220 YILEGAEKLSSLKIK--ALLPGHGL---IWKKD-PQRLLNHYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKE 292 (410)
T ss_dssp HHHHHHHHHHTSCCS--EEEESSSC---BBSSC-HHHHHHHHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCC--EEecCCcc---hhhcC-HHHHHHHHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHh
Confidence 356678888877777 55677532 11111 223333333321 11235577777888777777777777655
No 22
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=52.28 E-value=1e+02 Score=29.60 Aligned_cols=135 Identities=11% Similarity=0.009 Sum_probs=70.9
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCC--CeeEE
Q 012639 242 RSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINN--DHTLA 319 (459)
Q Consensus 242 ~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~--~~~la 319 (459)
+|+|-+|.....+++.|.+.|.+.+. +.. ...++|.+.|..++.+.-+.+.+.+. ++.. ..-++
T Consensus 123 PHvWldp~~~~~~a~~I~~~L~~~dP-~~a-----------~~y~~N~~~~~~~L~~Ld~~~~~~l~--~~~~~~~~~v~ 188 (294)
T 3hh8_A 123 PHAWLNLENGIIYSKNIAKQLIAKDP-KNK-----------ETYEKNLKAYVAKLEKLDKEAKSKFD--AIAENKKLIVT 188 (294)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHCG-GGH-----------HHHHHHHHHHHHHHHHHHHHHHHTTT--TSCGGGCCEEE
T ss_pred CceeCCHHHHHHHHHHHHHHHHHhCc-cch-----------HHHHHHHHHHHHHHHHHHHHHHHHHh--hCCccCcEEEE
Confidence 35678888888889999888876532 110 11122344455566555555555542 1211 22223
Q ss_pred EecCc---------------cCCCCCCCcH---HHHHHHhhhcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCe
Q 012639 320 YQSRV---------------GPVKWLKPYT---DEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIE 381 (459)
Q Consensus 320 fQSr~---------------G~~~WL~P~t---~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~ 381 (459)
|...+ |..+=.+|+. .+.++.+.+.+++-|++-| .|-...+ +.++++.|++
T Consensus 189 ~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~-~~~~~~~----------~~ia~~~g~~ 257 (294)
T 3hh8_A 189 SEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVES-SVDRRPM----------ETVSKDSGIP 257 (294)
T ss_dssp EESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEET-TSCSHHH----------HHHHHHHCCC
T ss_pred ECChHHHHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC-CCCcHHH----------HHHHHHhCCc
Confidence 32211 1111124543 4455666677887766655 4444434 3457788987
Q ss_pred eE--EEcCCCCC----CHHHHHHHHH
Q 012639 382 NW--GRVPALNC----TPSFITDLAD 401 (459)
Q Consensus 382 ~~--~rvp~LNd----~p~fi~aLad 401 (459)
.. .+.+.++. ...+++++.+
T Consensus 258 v~~~~~~~~l~~~~~~~~~Y~~~m~~ 283 (294)
T 3hh8_A 258 IYSEIFTDSIAKKGKPGDSYYAMMKW 283 (294)
T ss_dssp EEEEECSSSCCCTTSTTCSHHHHHHH
T ss_pred EEeeecCcccCCCCCCcccHHHHHHH
Confidence 55 45567762 2345555543
No 23
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=49.84 E-value=22 Score=36.07 Aligned_cols=66 Identities=18% Similarity=0.319 Sum_probs=44.7
Q ss_pred CCCCCcHHHHHHHhhhc-CCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHHH
Q 012639 328 KWLKPYTDEVLVELGQK-GVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSF 395 (459)
Q Consensus 328 ~WL~P~t~d~L~~L~~~-G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p~f 395 (459)
.|.+|...+.|+++++. |++.|.+.+.-+.....-+..|+ .+.++.+++.|++ +..+.+++-++.+
T Consensus 26 rW~g~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i-~~lk~~l~~~GL~-i~~i~s~~~~~~i 92 (386)
T 3bdk_A 26 RWYGKKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENI-LELKKMVEEAGLE-ITVIESIPVHEDI 92 (386)
T ss_dssp BCCCTTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHH-HHHHHHHHTTTCE-EEEEECCCCCHHH
T ss_pred EecCCCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHH-HHHHHHHHHcCCE-EEEEecccccccc
Confidence 48888777899999999 99999886532222111123333 3567788899995 7777777766543
No 24
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=45.45 E-value=1.3e+02 Score=28.85 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=74.9
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCCCeeEEEe
Q 012639 242 RSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQ 321 (459)
Q Consensus 242 ~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQ 321 (459)
+++|-+|.....+++.|.+.|.+.+. +.. ...++|.+.|..++.+.-+.+.+.+.. +.+..-+++.
T Consensus 132 PH~Wldp~~~~~~a~~I~~~L~~~dP-~~a-----------~~y~~N~~~~~~~L~~Ld~~~~~~l~~--~~~~~~v~~H 197 (291)
T 1pq4_A 132 PHIWLSPTLVKRQATTIAKELAELDP-DNR-----------DQYEANLAAFLAELERLNQELGQILQP--LPQRKFIVFH 197 (291)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHHHCG-GGH-----------HHHHHHHHHHHHHHHHHHHHHHHHHTT--CSCCEEEESS
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHCc-ccH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCCEEEEEC
Confidence 46788999999999999999987632 211 111234556777777776777666632 2212112221
Q ss_pred c---------------CccCCCCCCCcHHH---HHHHhhhcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeE
Q 012639 322 S---------------RVGPVKWLKPYTDE---VLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENW 383 (459)
Q Consensus 322 S---------------r~G~~~WL~P~t~d---~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~ 383 (459)
. -.|.. .+|+..+ .++.+.+.|++- +++-..|-..-.|+ ++++.|++.
T Consensus 198 ~af~Yf~~~yGl~~~~~~~~~--~eps~~~l~~l~~~ik~~~v~~-If~e~~~~~~~~~~----------ia~~~g~~v- 263 (291)
T 1pq4_A 198 PSWAYFARDYNLVQIPIEVEG--QEPSAQELKQLIDTAKENNLTM-VFGETQFSTKSSEA----------IAAEIGAGV- 263 (291)
T ss_dssp CCCHHHHHHTTCEEEESCBTT--BCCCHHHHHHHHHHHHTTTCCE-EEEETTSCCHHHHH----------HHHHHTCEE-
T ss_pred CchHHHHHHCCCEEeecccCC--CCCCHHHHHHHHHHHHHcCCCE-EEEeCCCChHHHHH----------HHHHcCCeE-
Confidence 1 11221 3565443 344455567754 45555666565655 367788864
Q ss_pred EEcCCCCCCHHHHHHH---HHHHHHHc
Q 012639 384 GRVPALNCTPSFITDL---ADAVIEAL 407 (459)
Q Consensus 384 ~rvp~LNd~p~fi~aL---adlV~e~l 407 (459)
..+..|+. .+++.| ++.+.+.|
T Consensus 264 ~~ld~l~~--~Y~~~m~~n~~~l~~aL 288 (291)
T 1pq4_A 264 ELLDPLAA--DWSSNLKAVAQKIANAN 288 (291)
T ss_dssp EEECTTCS--SHHHHHHHHHHHHHHHH
T ss_pred EEEcCchh--hHHHHHHHHHHHHHHHH
Confidence 45666654 355444 44444443
No 25
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=39.94 E-value=1.3e+02 Score=27.24 Aligned_cols=61 Identities=11% Similarity=-0.003 Sum_probs=28.8
Q ss_pred HHHHHHhhhcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHHHHHHHHHHHHH
Q 012639 335 DEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIE 405 (459)
Q Consensus 335 ~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p~fi~aLadlV~e 405 (459)
++.-+.+.+.|.+-+.+.|+. ....|.+ ...-+.|.+.|.+.+ +++. + ... .+.++++..+
T Consensus 66 ~~~~~~l~~~gl~i~~~~~~~--~~~~~~~----~~~i~~A~~lGa~~v-~~~~-~-~~~-~~~l~~~a~~ 126 (262)
T 3p6l_A 66 KEIKELAASKGIKIVGTGVYV--AEKSSDW----EKMFKFAKAMDLEFI-TCEP-A-LSD-WDLVEKLSKQ 126 (262)
T ss_dssp HHHHHHHHHTTCEEEEEEEEC--CSSTTHH----HHHHHHHHHTTCSEE-EECC-C-GGG-HHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEeccC--CccHHHH----HHHHHHHHHcCCCEE-EecC-C-HHH-HHHHHHHHHH
Confidence 334444556677644444432 1222222 234566778888644 4432 2 122 3455555544
No 26
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=35.64 E-value=23 Score=29.94 Aligned_cols=38 Identities=18% Similarity=0.052 Sum_probs=28.9
Q ss_pred cHHHHHHHhhhcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCe
Q 012639 333 YTDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIE 381 (459)
Q Consensus 333 ~t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~ 381 (459)
.+.++++++.+.|+|. +++-.||.. .|..+.|+++|++
T Consensus 70 ~v~~~v~e~~~~g~k~-v~~~~G~~~----------~e~~~~a~~~Gir 107 (122)
T 3ff4_A 70 NQLSEYNYILSLKPKR-VIFNPGTEN----------EELEEILSENGIE 107 (122)
T ss_dssp HHGGGHHHHHHHCCSE-EEECTTCCC----------HHHHHHHHHTTCE
T ss_pred HHHHHHHHHHhcCCCE-EEECCCCCh----------HHHHHHHHHcCCe
Confidence 4567888899999986 567778742 3678889999985
No 27
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=34.71 E-value=2.5e+02 Score=26.70 Aligned_cols=56 Identities=16% Similarity=0.131 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCeeEEEecCcc-CCCCCCCcHHHHHHHhhhcCCceEEEEccc
Q 012639 293 RDQMEECIYLIMQRLKDRGINNDHTLAYQSRVG-PVKWLKPYTDEVLVELGQKGVKSLLAIPVS 355 (459)
Q Consensus 293 ~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~G-~~~WL~P~t~d~L~~L~~~G~k~VvVvPig 355 (459)
.++..+.++.+.+.. .|+ .+...+- +| |.+ ..-+.++.++-+.+.|..++-+.|+.
T Consensus 138 ~e~~~~~i~~l~~~~--~gi--~i~~~~I--vG~PgE-t~ed~~~t~~~l~~l~~~~v~~~~~~ 194 (304)
T 2qgq_A 138 SEELKKMLSSIRERF--PDA--VLRTSII--VGFPGE-TEEDFEELKQFVEEIQFDKLGAFVYS 194 (304)
T ss_dssp HHHHHHHHHHHHHHC--TTC--EEEEEEE--ECCTTC-CHHHHHHHHHHHHHHCCSEEEEEECC
T ss_pred HHHHHHHHHHHHhhC--CCC--EEEEEEE--EeCCCC-CHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 455666666655542 132 2222222 24 222 33456667777777788888888775
No 28
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=33.97 E-value=22 Score=27.39 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhcCCC---------ceEEeeeeccCCCHHHHHHHHHHCCCCEEE
Q 012639 157 DEQAQALKTALEAKNLP---------VNVYVGMRYWYPFTEEAVQQIKRDRITRLV 203 (459)
Q Consensus 157 ~~qa~~L~~~L~~~~~~---------~~V~~amrY~~P~i~eaL~~L~~~Gv~rIv 203 (459)
++.|+.|.+.|...|.+ ++|.+|---..-..+.+.++|++.|++..+
T Consensus 20 ~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~g~~~~i 75 (81)
T 1uta_A 20 AEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCI 75 (81)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHHCCSCCB
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHcCCCcEE
Confidence 45567777777655432 445544222223334445555555655443
No 29
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=33.61 E-value=1e+02 Score=27.00 Aligned_cols=45 Identities=20% Similarity=0.285 Sum_probs=27.3
Q ss_pred hhcCCceEEEEcccccccchh---hhHhHHHHHHHHHHHcCCeeEEEcC
Q 012639 342 GQKGVKSLLAIPVSFVSEHIE---TLEEIDMEYKELALESGIENWGRVP 387 (459)
Q Consensus 342 ~~~G~k~VvVvPigFvsDhlE---TL~EidiE~ke~a~e~G~~~~~rvp 387 (459)
.+-|.++|++.|++=.|+.+- +=.++=.+..+..++.|+ +..|+|
T Consensus 69 ~kv~~~~ivlYPyAHLSs~La~P~~A~~iL~~le~~L~~~g~-eV~raP 116 (143)
T 2hl0_A 69 EQVKAENVFVYPFAHLSSELAKPSVAMDILNRVYQGLKERGF-NVGKAP 116 (143)
T ss_dssp HHHTCCEEEEEECGGGCSSBCCHHHHHHHHHHHHHHHHHTTC-EEEECC
T ss_pred HhcCCCEEEEeccccccCccCChHHHHHHHHHHHHHHHhCCC-eEEEeC
Confidence 334788999999998886652 222222223444556787 466776
No 30
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=33.06 E-value=3.2e+02 Score=25.78 Aligned_cols=88 Identities=14% Similarity=0.227 Sum_probs=58.0
Q ss_pred CceEEeeeeccCCCHHHHHHHHHHCCCCEEEEEecCCcccc--------CChhhHHHHH----HHHHHHhccCCCCcEEE
Q 012639 173 PVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSI--------STTGSSIRVL----QNIFREDAYLSRLPVSI 240 (459)
Q Consensus 173 ~~~V~~amrY~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~--------~Ttgs~~~~l----~~~~~~~~~~~~~~~~~ 240 (459)
++.|.+|+-=..|...+..+..++.|.+=++-+||=|.--. .+++..-+++ ..++..-...-.+.=+.
T Consensus 27 p~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHm 106 (245)
T 2nly_A 27 EIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHM 106 (245)
T ss_dssp SSCEEEEECSSSTTHHHHHHHHHHTTCEEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcEEEeccc
Confidence 67888888777799999999999999999999999765211 1223333344 44444432222344566
Q ss_pred ecCCCCCHHHHHHHHHHHHH
Q 012639 241 IRSWYQREGYVNSMADLIQK 260 (459)
Q Consensus 241 i~~~~~~p~yI~ala~~I~~ 260 (459)
...+-.++.-.+.+.+.+++
T Consensus 107 GS~~T~~~~~m~~vm~~l~~ 126 (245)
T 2nly_A 107 GSKIVENEKIMRAILEVVKE 126 (245)
T ss_dssp CTTGGGCHHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHHH
Confidence 77788788877777666554
No 31
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=32.63 E-value=78 Score=31.03 Aligned_cols=64 Identities=14% Similarity=0.226 Sum_probs=40.8
Q ss_pred CCCCC-cHHHHHHHhhhc-CCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCH
Q 012639 328 KWLKP-YTDEVLVELGQK-GVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTP 393 (459)
Q Consensus 328 ~WL~P-~t~d~L~~L~~~-G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p 393 (459)
.|.+| +.+++|+.+++. |++.|.+.....-.+..-+..++ .+.++.+++.|++ +.-+..++.++
T Consensus 16 ~~~g~~~~~~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~-~~~~~~l~~~GL~-i~~~~~~~~~~ 81 (367)
T 1tz9_A 16 RWYGAAGDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEI-QALKQSVEQEGLA-LLGIESVAIHD 81 (367)
T ss_dssp BCCCTTTCCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHH-HHHHHHHHHTTCE-EEEECSCCCCH
T ss_pred eecCCCCChHHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHH-HHHHHHHHHCCCe-EEEEecCCCcH
Confidence 57888 777889999999 99999874321111111112222 3467888899996 54566676664
No 32
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=32.50 E-value=3.6 Score=38.53 Aligned_cols=56 Identities=25% Similarity=0.451 Sum_probs=44.5
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccCCccHHHHHH
Q 012639 238 VSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEE 298 (459)
Q Consensus 238 ~~~i~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~ 298 (459)
+..|.+|.+++.+++.++..++++|..| +.+.=++-.+|+|...+ ..|+|..++.+
T Consensus 47 m~Li~rYp~~~~Lv~~m~~LarEEL~HF---eqVl~im~~Rgi~l~~~--~~~~Ya~~L~k 102 (206)
T 2itb_A 47 LSLIAKYNTHLDLINMMSRLAREELVHH---EQVLRLMKRRGVPLRPV--SAGRYASGLRR 102 (206)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHH---HHHHHHHHHTTCCCCCC--CCCSHHHHHHT
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHHHHHH---HHHHHHHHHcCCCCCCC--CCCHHHHHHHH
Confidence 5567789999999999999999999887 33555667889998876 36899766554
No 33
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=29.23 E-value=3.4e+02 Score=25.79 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=37.3
Q ss_pred CchHHHHHHHHHHHHHHHHhcCCCceEEeeeeccCCCHHHHHHHHHH---CCCCEEEEEecCCccccCChh
Q 012639 150 SPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKR---DRITRLVVLPLYPQFSISTTG 217 (459)
Q Consensus 150 SPL~~~T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~i~eaL~~L~~---~Gv~rIvvlPLyPqyS~~Ttg 217 (459)
++.....++ .+.++...+.....++|..|- +..++.++++..+. .|++-++++| |.|...+-.
T Consensus 48 ~~~Ls~~Er-~~v~~~~~~~~~gr~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~ 113 (292)
T 2ojp_A 48 SATLNHDEH-ADVVMMTLDLADGRIPVIAGT--GANATAEAISLTQRFNDSGIVGCLTVT--PYYNRPSQE 113 (292)
T ss_dssp GGGSCHHHH-HHHHHHHHHHHTTSSCEEEEC--CCSSHHHHHHHHHHTTTSSCSEEEEEC--CCSSCCCHH
T ss_pred hhhCCHHHH-HHHHHHHHHHhCCCCcEEEec--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHH
Confidence 455444333 222333333323356677663 77899999986653 5999998887 446555543
No 34
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=27.39 E-value=3e+02 Score=23.65 Aligned_cols=29 Identities=10% Similarity=0.076 Sum_probs=21.5
Q ss_pred CCch--HHHHHHHHHHHHHHHHhcCCCceEE
Q 012639 149 GSPL--RKITDEQAQALKTALEAKNLPVNVY 177 (459)
Q Consensus 149 gSPL--~~~T~~qa~~L~~~L~~~~~~~~V~ 177 (459)
+||- ...|+..++.+.+.|.+.++++.|.
T Consensus 9 ~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~ 39 (201)
T 1t5b_A 9 SSILAGYSQSGQLTDYFIEQWREKHVADEIT 39 (201)
T ss_dssp CCSSGGGCHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred eCCCCCCChHHHHHHHHHHHHHHhCCCCeEE
Confidence 5776 4889999999999998766444444
No 35
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=26.86 E-value=2.5e+02 Score=26.62 Aligned_cols=136 Identities=13% Similarity=0.181 Sum_probs=73.1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCCCeeEEEe
Q 012639 242 RSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQ 321 (459)
Q Consensus 242 ~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQ 321 (459)
+|+|-+|.....+++.|.++|.+.+. +.. ...++|.+.|..++.+.-+.+.+.+.. +....-+++.
T Consensus 119 PH~Wldp~~~~~~a~~I~~~L~~~dP-~~a-----------~~y~~N~~~~~~~L~~Ld~~~~~~l~~--~~~~~~v~~H 184 (284)
T 3cx3_A 119 PHTWLDPEKAGEEAQIIADKLSEVDS-EHK-----------ETYQKNAQAFIKKAQELTKKFQPKFEK--ATQKTFVTQH 184 (284)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHSG-GGH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHS--CSCCCEEEEE
T ss_pred CCcccCHHHHHHHHHHHHHHHHHhCc-ccH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEEC
Confidence 46788999999999999999977632 211 111234456777777766666666642 1112122222
Q ss_pred cC---------------ccCCCCCCCc---HHHHHHHhhhcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeE
Q 012639 322 SR---------------VGPVKWLKPY---TDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENW 383 (459)
Q Consensus 322 Sr---------------~G~~~WL~P~---t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~ 383 (459)
.. .|..+=.+|+ +.+.++.+.+.|++-| ++-..|-..-+|+ ++++.|++ +
T Consensus 185 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~i-f~e~~~~~~~~~~----------ia~~~g~~-v 252 (284)
T 3cx3_A 185 TAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTI-FTESNASSKVAET----------LVKSTGVG-L 252 (284)
T ss_dssp SCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHTTCCCE-EECSSSCCHHHHH----------HHSSSSCC-E
T ss_pred CchHHHHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHcCCCEE-EEeCCCCcHHHHH----------HHHHcCCe-E
Confidence 11 1111112343 3344555666677644 4444554444444 47788986 4
Q ss_pred EEcCCCCC----CHHHHHHHHHHH
Q 012639 384 GRVPALNC----TPSFITDLADAV 403 (459)
Q Consensus 384 ~rvp~LNd----~p~fi~aLadlV 403 (459)
..+..+.. ...+++.+...+
T Consensus 253 ~~l~~l~~~~~~~~~Y~~~m~~n~ 276 (284)
T 3cx3_A 253 KTLNPLESDPQNDKTYLENLEENM 276 (284)
T ss_dssp EECCCSSSCCCSSCCHHHHHHHHH
T ss_pred EEecCcccCCCCcccHHHHHHHHH
Confidence 45655543 235666554433
No 36
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=26.59 E-value=1e+02 Score=26.82 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=58.3
Q ss_pred eEEEEEccCCCCCcCcHH-HHHHhhcCC--CCeeeCCchhhhhhhHHHHHHHhccChhhHHhhhccCCCCchHHHHHHHH
Q 012639 84 VGVLLLNLGGPDTLHDVQ-PFLFNLFAD--PDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA 160 (459)
Q Consensus 84 ~aVLLlnlG~P~s~~dV~-~fL~~~l~D--~~Vi~lP~~~~~~~~~L~~~I~~~R~~k~~~~Y~~IgggSPL~~~T~~qa 160 (459)
.-||+...|+ +. -|+. .++..+|.+ =+|+.++.. -+...++...+ ......|| -|-+...+..+.
T Consensus 19 ~~vlla~~~g-d~-HdiG~~~va~~l~~~G~eVi~lG~~-----~p~e~lv~aa~----~~~~diV~-lS~~~~~~~~~~ 86 (161)
T 2yxb_A 19 YKVLVAKMGL-DG-HDRGAKVVARALRDAGFEVVYTGLR-----QTPEQVAMAAV----QEDVDVIG-VSILNGAHLHLM 86 (161)
T ss_dssp CEEEEEEESS-SS-CCHHHHHHHHHHHHTTCEEECCCSB-----CCHHHHHHHHH----HTTCSEEE-EEESSSCHHHHH
T ss_pred CEEEEEeCCC-Cc-cHHHHHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHH----hcCCCEEE-EEeechhhHHHH
Confidence 3488888887 42 2232 344455543 377776521 13344443322 12333444 344444566677
Q ss_pred HHHHHHHHhcCC-CceEEeeeeccCCCHHHHHHHHHHCCCCEEE
Q 012639 161 QALKTALEAKNL-PVNVYVGMRYWYPFTEEAVQQIKRDRITRLV 203 (459)
Q Consensus 161 ~~L~~~L~~~~~-~~~V~~amrY~~P~i~eaL~~L~~~Gv~rIv 203 (459)
..+.+.|++.+. +++|.+| +.|..++ .+.+.+.|++.++
T Consensus 87 ~~~i~~L~~~g~~~i~v~vG---G~~~~~~-~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 87 KRLMAKLRELGADDIPVVLG---GTIPIPD-LEPLRSLGIREIF 126 (161)
T ss_dssp HHHHHHHHHTTCTTSCEEEE---ECCCHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHHhcCCCCCEEEEe---CCCchhc-HHHHHHCCCcEEE
Confidence 777777777663 6888888 5565544 4567788998554
No 37
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=26.57 E-value=2.7e+02 Score=26.45 Aligned_cols=121 Identities=14% Similarity=0.166 Sum_probs=67.2
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCC--CCeeE
Q 012639 241 IRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGIN--NDHTL 318 (459)
Q Consensus 241 i~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~--~~~~l 318 (459)
=+|.|-+|.....+++.|.++|.+.+ |+.. ...++|.+.|..++.+.-+.+.+.+.. ++ ...-+
T Consensus 102 dPHvWldp~~~~~~a~~I~~~L~~~d-P~~a-----------~~y~~N~~~~~~~L~~ld~~~~~~l~~--~~~~~~~~v 167 (282)
T 3mfq_A 102 DPHFWFSIPLYKSAVAVASEELQKLL-PAKA-----------EMIQKNTEKYQAQLDDLHAWVEKELSV--IPKESRYLV 167 (282)
T ss_dssp CCCGGGSHHHHHHHHHHHHHHHTTTC-GGGH-----------HHHHHHHHHHHHHHHHHHHHHHHHHTT--SCGGGCEEE
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHhC-hhhH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCccCcEEE
Confidence 34677889999999999999997753 2211 111234456777777777777776632 21 12222
Q ss_pred EEecC-------c--------cCCCCCCCcHH---HHHHHhhhcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCC
Q 012639 319 AYQSR-------V--------GPVKWLKPYTD---EVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGI 380 (459)
Q Consensus 319 afQSr-------~--------G~~~WL~P~t~---d~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~ 380 (459)
+|... . |..+=.+|+.. +.++.+.+.+++-|++ -..|-...+|+| .+.+++.|.
T Consensus 168 t~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~-e~~~~~~~~~~l-------~~~a~~~g~ 239 (282)
T 3mfq_A 168 TPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFT-ESTTNPERMKKL-------QEAVKAKGG 239 (282)
T ss_dssp CSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEEC-BTTSCTHHHHHH-------HHHHHTTSC
T ss_pred EECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEE-eCCCChHHHHHH-------HHHHHhcCC
Confidence 22111 1 21111245433 3455556667765544 445555667664 445677887
Q ss_pred eeE
Q 012639 381 ENW 383 (459)
Q Consensus 381 ~~~ 383 (459)
...
T Consensus 240 ~v~ 242 (282)
T 3mfq_A 240 QVE 242 (282)
T ss_dssp CCE
T ss_pred ceE
Confidence 543
No 38
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=26.20 E-value=55 Score=24.71 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhcCCC---------ceEEeeeeccCCCHHHHHHHHHHCCCCE
Q 012639 157 DEQAQALKTALEAKNLP---------VNVYVGMRYWYPFTEEAVQQIKRDRITR 201 (459)
Q Consensus 157 ~~qa~~L~~~L~~~~~~---------~~V~~amrY~~P~i~eaL~~L~~~Gv~r 201 (459)
++.|+.+.+.|...|.+ ++|.+|---..-..++++++|++.|++-
T Consensus 20 ~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vGpf~~~~~A~~~~~~L~~~g~~~ 73 (79)
T 1x60_A 20 KANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKNAGFDA 73 (79)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhCCCCeEEecCCcEEEEEECCcCCHHHHHHHHHHHHHcCCce
Confidence 45677777777655422 4455542112222334455666666643
No 39
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=25.88 E-value=1.6e+02 Score=27.98 Aligned_cols=136 Identities=11% Similarity=0.145 Sum_probs=74.1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCCCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCCCeeEEEe
Q 012639 242 RSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQ 321 (459)
Q Consensus 242 ~~~~~~p~yI~ala~~I~~~l~~~~~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQ 321 (459)
++.|-+|.....+++.|.+.|.+.+. +.. ...++|.+.|..++.+.-+.+.+.+.. +....-+++.
T Consensus 116 PH~Wldp~~~~~~a~~I~~~L~~~dP-~~a-----------~~y~~N~~~~~~~L~~Ld~~~~~~l~~--~~~~~~v~~H 181 (284)
T 2prs_A 116 MHLWLSPEIARATAVAIHGKLVELMP-QSR-----------AKLDANLKDFEAQLASTETQVGNELAP--LKGKGYFVFH 181 (284)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHHHCG-GGH-----------HHHHHHHHHHHHHHHHHHHHHHHHHGG--GTTCCEEEEE
T ss_pred CcccCCHHHHHHHHHHHHHHHHHhCc-hhH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEEC
Confidence 46788899999999999999977532 211 111234456767777766666666642 1112222222
Q ss_pred cCc---------------cCCCCCCCcHH---HHHHHhhhcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeE
Q 012639 322 SRV---------------GPVKWLKPYTD---EVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENW 383 (459)
Q Consensus 322 Sr~---------------G~~~WL~P~t~---d~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~ 383 (459)
..+ |..+=.+|+.. +.++.+.+.|++-| ++-..|-..-+|+| +++.|++.
T Consensus 182 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~i-f~e~~~~~~~~~~i----------a~~~g~~v- 249 (284)
T 2prs_A 182 DAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCV-FAEPQFRPAVVESV----------ARGTSVRM- 249 (284)
T ss_dssp SCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHTTCCEE-EECTTSCSHHHHHH----------TTTSCCEE-
T ss_pred ccHHHHHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHHcCCCEE-EEeCCCChHHHHHH----------HHHcCCeE-
Confidence 211 11111356443 44555666677544 44445555555553 66889864
Q ss_pred EEcCCCCCC-----HHHHHHHHHHH
Q 012639 384 GRVPALNCT-----PSFITDLADAV 403 (459)
Q Consensus 384 ~rvp~LNd~-----p~fi~aLadlV 403 (459)
..+..|... ..+++.+.+.+
T Consensus 250 ~~ld~l~~~~~~~~~~Y~~~m~~n~ 274 (284)
T 2prs_A 250 GTLDPLGTNIKLGKTSYSEFLSQLA 274 (284)
T ss_dssp EECCTTCTTSCCSTTHHHHHHHHHH
T ss_pred EEeccCcccCCCCcccHHHHHHHHH
Confidence 446555541 25766664433
No 40
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=24.59 E-value=1.5e+02 Score=27.94 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=57.3
Q ss_pred HHHHHHCCCCEEEEEecCCcc----ccCChhhHHHHHHHHHHHhccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHhhcC
Q 012639 191 VQQIKRDRITRLVVLPLYPQF----SISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQ 266 (459)
Q Consensus 191 L~~L~~~Gv~rIvvlPLyPqy----S~~Ttgs~~~~l~~~~~~~~~~~~~~~~~i~~~~~~p~yI~ala~~I~~~l~~~~ 266 (459)
+-.++++|.+=+-++.+||+- ...+.+ .+.+.+..+.. ++++.+++--+....+++.+.+. +...+
T Consensus 21 l~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~--~e~a~~~A~~L----GIpl~~v~~~g~~~~e~e~l~~~----l~~~~ 90 (237)
T 3rjz_A 21 LYWAIKNRFSVKFLVTMVSENEESYMYHTIN--ANLTDLQARAL----GIPLVKGFTQGEKEKEVEDLKRV----LSGLK 90 (237)
T ss_dssp HHHHHHTTCEEEEEEEEECC--------CCS--SSHHHHHHHHH----TCCEEEEEC------CHHHHHHH----HTTSC
T ss_pred HHHHHHcCCeEEEEEEEcCCCCCccccCCcc--HHHHHHHHHHc----CCCEEEEECCCCchHHHHHHHHH----HHhcC
Confidence 345677887544445577763 111211 12333333322 35677766444444455554444 43331
Q ss_pred CCCceEEEEeeCCCchhhccccCCccHHHHHHHHHHHHHHHhhcCCCCCeeEEEecCccCCCCCCCcHHHHHHHhhhcCC
Q 012639 267 KPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQSRVGPVKWLKPYTDEVLVELGQKGV 346 (459)
Q Consensus 267 ~~~~~~LLFSaHGlP~~~v~~~GDpY~~q~~~t~~~v~e~L~~~g~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~ 346 (459)
- + .++ -||-+......-...+.+++ |+ .+.+ | =|-. +.++.++++.+.|.
T Consensus 91 i-~--~vv-------------~Gdi~s~yqr~r~e~vc~~~---gl--------~~~~-P-LW~~-d~~~Ll~e~i~~G~ 140 (237)
T 3rjz_A 91 I-Q--GIV-------------AGALASKYQRKRIEKVAKEL---GL--------EVYT-P-AWGR-DAKEYMRELLNLGF 140 (237)
T ss_dssp C-S--EEE-------------CC---CCSHHHHHHHHHHHT---TC--------EEEC-S-SSSC-CHHHHHHHHHHTTC
T ss_pred C-c--EEE-------------ECCcchHHHHHHHHHHHHHc---CC--------EEEc-c-ccCC-CHHHHHHHHHHCCC
Confidence 1 1 222 14443212233445677777 66 2322 2 1755 46789999999999
Q ss_pred ceEEEE
Q 012639 347 KSLLAI 352 (459)
Q Consensus 347 k~VvVv 352 (459)
+-+++.
T Consensus 141 ~aiiv~ 146 (237)
T 3rjz_A 141 KIMVVG 146 (237)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 877754
No 41
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=24.11 E-value=3.7e+02 Score=24.69 Aligned_cols=70 Identities=7% Similarity=0.031 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceEEeeeeccCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHHHHHH
Q 012639 153 RKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFR 228 (459)
Q Consensus 153 ~~~T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~~~ 228 (459)
...|+..++.+.+.|++.|.++. +---+....+++..+++.+ +|.||+. +|-|-.+.++.....+++.+.
T Consensus 42 ~s~n~~L~~~~~~~l~~~g~ev~--~~dL~~~~Dv~~~~~~l~~--aD~iv~~--~P~y~~~~p~~lK~~iD~v~~ 111 (218)
T 3rpe_A 42 GALNLTLTNVAADFLRESGHQVK--ITTVDQGYDIESEIENYLW--ADTIIYQ--MPAWWMGEPWILKKYIDEVFT 111 (218)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCEE--EEEGGGCCCHHHHHHHHHH--CSEEEEE--EECBTTBCCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhhCCCEEE--EEECCCccCHHHHHHHHHh--CCEEEEE--CChHhccCCHHHHHHHHHHHh
Confidence 47888899999988887665544 3333345677777777765 3555543 344444555544445555443
No 42
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=23.85 E-value=3.1e+02 Score=26.42 Aligned_cols=37 Identities=16% Similarity=0.075 Sum_probs=27.7
Q ss_pred CCCceEEeeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCcc
Q 012639 171 NLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQF 211 (459)
Q Consensus 171 ~~~~~V~~amrY~~P~i~eaL~~L---~~~Gv~rIvvlPLyPqy 211 (459)
...++|..|- +..++.++++.. .+.|++-++++| |.|
T Consensus 75 ~grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--Pyy 114 (309)
T 3fkr_A 75 AGRVPVIVTT--SHYSTQVCAARSLRAQQLGAAMVMAMP--PYH 114 (309)
T ss_dssp TTSSCEEEEC--CCSSHHHHHHHHHHHHHTTCSEEEECC--SCB
T ss_pred CCCCcEEEec--CCchHHHHHHHHHHHHHcCCCEEEEcC--CCC
Confidence 3456777764 778999998854 457999999987 556
No 43
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=23.56 E-value=40 Score=33.65 Aligned_cols=47 Identities=21% Similarity=0.405 Sum_probs=26.7
Q ss_pred cEEEecCCCCCHHHHHHHHHHHH---HHHhhcCCCCceEEEEeeCCCchhhc
Q 012639 237 PVSIIRSWYQREGYVNSMADLIQ---KELGKFQKPEEVMIFFSAHGVPVSYV 285 (459)
Q Consensus 237 ~~~~i~~~~~~p~yI~ala~~I~---~~l~~~~~~~~~~LLFSaHGlP~~~v 285 (459)
++.+..+.=-+|..++.|.++=- +.+... +++..+||+|||+|....
T Consensus 44 ~iy~~g~IVHN~~Vv~~L~~~Gv~~ve~l~ev--~~g~~VIirAHGv~~~v~ 93 (328)
T 3szu_A 44 PIYVRHEVVHNRYVVDSLRERGAIFIEQISEV--PDGAILIFSAHGVSQAVR 93 (328)
T ss_dssp CEEEESCSSSCHHHHHHHHHTTEEEESSGGGS--CTTCEEEECTTCCCHHHH
T ss_pred CEEEeCCCccCHHHHHHHHHCCCEEecchhhC--CCCCEEEEECCCCCHHHH
Confidence 35555555555666665544300 112333 234579999999997653
No 44
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=22.72 E-value=4.3e+02 Score=25.04 Aligned_cols=51 Identities=20% Similarity=0.160 Sum_probs=33.7
Q ss_pred CCceEEeeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCccccCChhhHHHHHHHH
Q 012639 172 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNI 226 (459)
Q Consensus 172 ~~~~V~~amrY~~P~i~eaL~~L---~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~ 226 (459)
..++|..|- +..+++++++.. .+.|++-++++| |.|...|-...++.+.+.
T Consensus 68 grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~v 121 (294)
T 2ehh_A 68 GRIKVIAGT--GGNATHEAVHLTAHAKEVGADGALVVV--PYYNKPTQRGLYEHFKTV 121 (294)
T ss_dssp TSSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHH
T ss_pred CCCcEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHH
Confidence 356777663 678999998754 457999999887 446655544444444333
No 45
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=21.86 E-value=4.9e+02 Score=25.31 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=41.0
Q ss_pred CchHHHHHHHHHHHHHHHHhcCCCceEEeeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCccccCChhhHHHHHHHH
Q 012639 150 SPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNI 226 (459)
Q Consensus 150 SPL~~~T~~qa~~L~~~L~~~~~~~~V~~amrY~~P~i~eaL~~L---~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~ 226 (459)
++.....+++ +.++...+..+..++|..| -+..++.++++.. .+.|++-++++| |.|...+-...++.+.+.
T Consensus 81 ~~~Ls~eEr~-~vi~~~ve~~~grvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~Y~~~s~~~l~~~f~~V 155 (332)
T 2r8w_A 81 YMYLTREERR-RAIEAAATILRGRRTLMAG--IGALRTDEAVALAKDAEAAGADALLLAP--VSYTPLTQEEAYHHFAAV 155 (332)
T ss_dssp GGGSCHHHHH-HHHHHHHHHHTTSSEEEEE--ECCSSHHHHHHHHHHHHHHTCSEEEECC--CCSSCCCHHHHHHHHHHH
T ss_pred hhhCCHHHHH-HHHHHHHHHhCCCCcEEEe--cCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHHH
Confidence 4554443332 2233233333335677766 4678899998754 456999988887 446655554444444433
No 46
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=21.69 E-value=1.7e+02 Score=27.61 Aligned_cols=22 Identities=18% Similarity=0.297 Sum_probs=16.1
Q ss_pred HHHHHHHHHHCCCCEEEEEecC
Q 012639 187 TEEAVQQIKRDRITRLVVLPLY 208 (459)
Q Consensus 187 i~eaL~~L~~~Gv~rIvvlPLy 208 (459)
+.|.++.|.+.|++++|++-=+
T Consensus 99 l~di~~sl~~~G~rrlvivNgH 120 (254)
T 3lub_A 99 LEDIVSSLHVQGFRKLLILSGH 120 (254)
T ss_dssp HHHHHHHHHHTTCCEEEEEESC
T ss_pred HHHHHHHHHHcCCCEEEEEeCC
Confidence 5566667777788888887765
No 47
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=21.61 E-value=4.4e+02 Score=25.42 Aligned_cols=51 Identities=20% Similarity=0.182 Sum_probs=33.2
Q ss_pred CCceEEeeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCccccCChhhHHHHHHHH
Q 012639 172 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQNI 226 (459)
Q Consensus 172 ~~~~V~~amrY~~P~i~eaL~~L---~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~ 226 (459)
..++|..| -+..++.++++.. .+.|++-++++| |.|...+....++.+.+.
T Consensus 91 grvpViaG--vg~~st~eai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~~v 144 (314)
T 3qze_A 91 GRIPVIAG--TGANSTREAVALTEAAKSGGADACLLVT--PYYNKPTQEGMYQHFRHI 144 (314)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHH
T ss_pred CCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHH
Confidence 35666665 5678899998854 457999999987 446555544444444333
No 48
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=21.47 E-value=2.9e+02 Score=26.10 Aligned_cols=48 Identities=13% Similarity=-0.045 Sum_probs=31.4
Q ss_pred eeeccCCCHHHHHHHHHHCCCCEEEEEecCCccccCChhhHHHHHHHHH
Q 012639 179 GMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIF 227 (459)
Q Consensus 179 amrY~~P~i~eaL~~L~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~~~ 227 (459)
+.-.++|..++++++..+.|+++++++. -+.|....+-.+-..+.+++
T Consensus 61 av~~G~~~~~~~lr~ala~GaD~vi~v~-d~~~~~~~~~~~a~~La~~i 108 (264)
T 1o97_C 61 VVSVGPDRVDESLRKCLAKGADRAVRVW-DDAAEGSDAIVVGRILTEVI 108 (264)
T ss_dssp EEEESCGGGHHHHHHHHHTTCSEEEEEC-CGGGTTCCHHHHHHHHHHHH
T ss_pred EEEeCchhHHHHHHHHHhcCCCEEEEEc-CcccccCCHHHHHHHHHHHH
Confidence 4455677788999999889999999997 45544333333333333333
No 49
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=21.40 E-value=4.8e+02 Score=24.94 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=33.1
Q ss_pred CCceEEeeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCccccCChhhHHHHHHH
Q 012639 172 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQN 225 (459)
Q Consensus 172 ~~~~V~~amrY~~P~i~eaL~~L---~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~ 225 (459)
..++|..| -+..+++++++.. .+.|++-++++| |.|...+-...++.+.+
T Consensus 84 grvpviaG--vg~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ 136 (304)
T 3cpr_A 84 DRAKLIAG--VGTNNTRTSVELAEAAASAGADGLLVVT--PYYSKPSQEGLLAHFGA 136 (304)
T ss_dssp TTSEEEEE--CCCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHH
T ss_pred CCCcEEec--CCCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHHH
Confidence 35677766 3678999998754 457999999987 44665554434443333
No 50
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.30 E-value=4.6e+02 Score=24.95 Aligned_cols=50 Identities=14% Similarity=0.100 Sum_probs=32.7
Q ss_pred CCceEEeeeeccCCCHHHHHHHH---HHCCCCEEEEEecCCccccCChhhHHHHHHH
Q 012639 172 LPVNVYVGMRYWYPFTEEAVQQI---KRDRITRLVVLPLYPQFSISTTGSSIRVLQN 225 (459)
Q Consensus 172 ~~~~V~~amrY~~P~i~eaL~~L---~~~Gv~rIvvlPLyPqyS~~Ttgs~~~~l~~ 225 (459)
..++|..| -+..+++++++.. .+.|++-++++| |.|...+-...++.+.+
T Consensus 75 grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~~ 127 (297)
T 3flu_A 75 KRVPVIAG--TGANNTVEAIALSQAAEKAGADYTLSVV--PYYNKPSQEGIYQHFKT 127 (297)
T ss_dssp TSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHH
T ss_pred CCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHHH
Confidence 35667666 4778999998854 467999999887 44655554333333333
No 51
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=21.18 E-value=3.4e+02 Score=24.40 Aligned_cols=62 Identities=18% Similarity=0.134 Sum_probs=32.7
Q ss_pred HHHHHHHhhhcCCceEEEEcccccccchhhhHhHHHHHHHHHHHcCCeeEEEcCCCCCCHHHHHHHHHHHHH
Q 012639 334 TDEVLVELGQKGVKSLLAIPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCTPSFITDLADAVIE 405 (459)
Q Consensus 334 t~d~L~~L~~~G~k~VvVvPigFvsDhlETL~EidiE~ke~a~e~G~~~~~rvp~LNd~p~fi~aLadlV~e 405 (459)
.++.-+.+.+.|.+-+.+.+..+ +.+| ++ .+.-+.|.+.|...++..|. ....+.+++...+
T Consensus 63 ~~~~~~~l~~~gl~i~~~~~~~~--~~~~---~~-~~~i~~A~~lGa~~v~~~p~----~~~l~~l~~~a~~ 124 (257)
T 3lmz_A 63 IRAFHDKCAAHKVTGYAVGPIYM--KSEE---EI-DRAFDYAKRVGVKLIVGVPN----YELLPYVDKKVKE 124 (257)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEE--CSHH---HH-HHHHHHHHHHTCSEEEEEEC----GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEecccc--CCHH---HH-HHHHHHHHHhCCCEEEecCC----HHHHHHHHHHHHH
Confidence 34445556667886555544433 2232 22 23467788899875554332 2334455555544
No 52
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=20.80 E-value=1e+02 Score=27.96 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=37.3
Q ss_pred CCCCCCcHHHHHHHhhhcCCceEEEEcc--cccccchhhhHhHHHHHH-HHHHHcCCe
Q 012639 327 VKWLKPYTDEVLVELGQKGVKSLLAIPV--SFVSEHIETLEEIDMEYK-ELALESGIE 381 (459)
Q Consensus 327 ~~WL~P~t~d~L~~L~~~G~k~VvVvPi--gFvsDhlETL~EidiE~k-e~a~e~G~~ 381 (459)
.-|+.|-+.+-+..|.+.|+ .++|+ +|.+ ..++++||-.... ......|++
T Consensus 127 ~m~~~~~~~~N~~~L~~~G~---~ivpp~~g~~~-~p~si~div~~~v~~~ld~~~i~ 180 (189)
T 2ejb_A 127 EAPYNEIHLENMLKITRMGG---VVVPASPAFYH-KPQSIDDMINFVVGKLLDVLRIE 180 (189)
T ss_dssp CSSCCHHHHHHHHHHHHTTC---EEEECCCCSTT-CCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHHHHCCe---EEeCCChHHhh-CCCCHHHHHHHHHHHHHHhCCCC
Confidence 45999999999999999874 66766 5644 6677777765554 455667874
Done!