Query 012645
Match_columns 459
No_of_seqs 133 out of 1540
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 13:28:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012645.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012645hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.7E-66 1.2E-70 509.4 36.5 428 6-451 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 2.9E-61 1E-65 482.5 42.2 434 1-452 1-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 8.5E-62 2.9E-66 488.0 38.0 445 1-451 1-478 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 5.6E-61 1.9E-65 477.4 35.6 434 1-452 1-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 5.6E-60 1.9E-64 471.5 35.0 427 5-451 7-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.7E-46 1.3E-50 369.9 31.9 398 5-452 10-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 9.7E-46 3.3E-50 364.1 26.8 363 5-451 20-399 (400)
8 1iir_A Glycosyltransferase GTF 100.0 3.2E-43 1.1E-47 347.7 24.3 378 8-453 1-401 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 1.6E-41 5.6E-46 335.6 30.8 377 6-451 19-412 (415)
10 3ia7_A CALG4; glycosysltransfe 100.0 7.8E-41 2.7E-45 329.2 32.8 375 6-451 3-397 (402)
11 1rrv_A Glycosyltransferase GTF 100.0 1.3E-42 4.6E-47 343.4 19.8 379 8-453 1-402 (416)
12 3h4t_A Glycosyltransferase GTF 100.0 2.1E-41 7.1E-46 333.2 23.9 367 8-452 1-382 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 2.1E-40 7.1E-45 330.1 26.9 375 5-452 18-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 1.8E-39 6.3E-44 322.4 28.5 367 1-431 1-383 (430)
15 2p6p_A Glycosyl transferase; X 100.0 6.1E-39 2.1E-43 313.9 28.1 356 8-454 1-381 (384)
16 4fzr_A SSFS6; structural genom 100.0 4E-38 1.4E-42 309.6 21.1 345 5-431 13-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 8.9E-37 3.1E-41 299.9 26.7 355 5-451 18-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.1E-35 7.2E-40 289.5 25.6 355 7-451 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 9.9E-34 3.4E-38 279.5 29.4 360 5-451 18-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 8.4E-30 2.9E-34 246.5 25.3 307 8-413 3-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 2.4E-27 8.2E-32 204.1 15.3 163 254-430 6-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.4E-20 4.7E-25 182.1 27.0 301 8-413 7-324 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 3.5E-16 1.2E-20 143.7 19.0 260 8-391 1-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1.7E-15 5.9E-20 133.4 8.5 131 267-409 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.5 3E-11 1E-15 119.3 28.1 375 5-454 18-429 (438)
26 3okp_A GDP-mannose-dependent a 99.4 4.8E-11 1.6E-15 115.9 26.7 309 5-413 2-345 (394)
27 3fro_A GLGA glycogen synthase; 99.4 6E-11 2.1E-15 117.0 27.3 379 6-452 1-429 (439)
28 1v4v_A UDP-N-acetylglucosamine 99.4 5.8E-12 2E-16 122.0 18.6 129 268-413 197-335 (376)
29 3ot5_A UDP-N-acetylglucosamine 99.4 2.7E-12 9.3E-17 125.1 14.8 315 5-413 25-362 (403)
30 3dzc_A UDP-N-acetylglucosamine 99.4 6.4E-12 2.2E-16 122.3 15.3 323 5-413 23-368 (396)
31 1vgv_A UDP-N-acetylglucosamine 99.3 2E-11 6.7E-16 118.5 15.8 130 268-413 204-343 (384)
32 2iuy_A Avigt4, glycosyltransfe 99.3 6.4E-11 2.2E-15 113.0 18.6 124 272-411 164-307 (342)
33 2gek_A Phosphatidylinositol ma 99.3 1.8E-09 6.2E-14 105.2 28.3 307 5-413 18-350 (406)
34 3beo_A UDP-N-acetylglucosamine 99.2 3.6E-10 1.2E-14 109.1 19.8 129 268-413 204-343 (375)
35 2iw1_A Lipopolysaccharide core 99.2 2E-09 6.8E-14 103.7 23.2 143 269-427 195-353 (374)
36 2r60_A Glycosyl transferase, g 99.2 1.5E-09 5E-14 109.2 21.2 142 271-426 263-439 (499)
37 2jjm_A Glycosyl transferase, g 99.1 1.9E-07 6.3E-12 90.6 32.5 315 8-413 16-351 (394)
38 2x6q_A Trehalose-synthase TRET 98.9 1.1E-07 3.9E-12 92.9 22.6 129 270-413 231-380 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.9 3.7E-09 1.3E-13 102.1 11.1 311 8-413 10-343 (385)
40 1rzu_A Glycogen synthase 1; gl 98.8 2.2E-06 7.6E-11 85.5 25.8 129 271-413 292-444 (485)
41 2qzs_A Glycogen synthase; glyc 98.7 9.6E-06 3.3E-10 80.8 28.7 131 269-413 291-445 (485)
42 3s28_A Sucrose synthase 1; gly 98.7 6.9E-07 2.4E-11 93.6 19.7 131 269-413 571-735 (816)
43 3oy2_A Glycosyltransferase B73 98.7 1E-05 3.5E-10 78.7 26.0 130 269-413 183-356 (413)
44 2hy7_A Glucuronosyltransferase 98.5 2.8E-05 9.5E-10 75.6 23.4 114 271-413 223-353 (406)
45 2vsy_A XCC0866; transferase, g 98.4 6.9E-05 2.4E-09 76.2 25.8 83 322-413 434-523 (568)
46 2f9f_A First mannosyl transfer 98.4 1.1E-06 3.8E-11 74.9 10.1 139 271-426 24-174 (177)
47 2xci_A KDO-transferase, 3-deox 98.2 0.00012 4.2E-09 70.2 19.6 98 323-430 261-364 (374)
48 3vue_A GBSS-I, granule-bound s 98.0 0.0013 4.5E-08 66.0 23.4 136 269-411 326-476 (536)
49 2x0d_A WSAF; GT4 family, trans 97.8 0.0013 4.5E-08 63.8 18.8 80 321-413 294-380 (413)
50 1psw_A ADP-heptose LPS heptosy 97.8 0.0014 4.9E-08 61.9 18.4 102 8-129 1-106 (348)
51 3qhp_A Type 1 capsular polysac 97.7 0.00013 4.5E-09 60.9 9.2 139 270-427 2-156 (166)
52 3tov_A Glycosyl transferase fa 97.7 0.0041 1.4E-07 58.8 20.6 105 5-129 6-115 (349)
53 4gyw_A UDP-N-acetylglucosamine 97.6 0.0012 4.1E-08 68.8 16.3 137 268-413 521-669 (723)
54 2bfw_A GLGA glycogen synthase; 97.6 0.00099 3.4E-08 57.3 13.2 78 323-413 96-182 (200)
55 3q3e_A HMW1C-like glycosyltran 97.6 0.00079 2.7E-08 67.6 13.7 135 270-413 441-589 (631)
56 3rhz_A GTF3, nucleotide sugar 97.0 0.0021 7.2E-08 60.4 8.5 146 271-449 179-336 (339)
57 2gt1_A Lipopolysaccharide hept 96.8 0.016 5.5E-07 54.0 13.2 53 8-60 1-57 (326)
58 3ty2_A 5'-nucleotidase SURE; s 94.9 0.036 1.2E-06 49.1 5.6 46 5-52 9-54 (261)
59 2phj_A 5'-nucleotidase SURE; S 93.2 0.61 2.1E-05 41.0 10.2 109 8-133 2-128 (251)
60 2e6c_A 5'-nucleotidase SURE; S 92.0 1.1 3.7E-05 39.4 10.1 108 8-132 1-129 (244)
61 1j9j_A Stationary phase surviV 91.3 0.87 3E-05 40.1 8.7 110 8-132 1-128 (247)
62 1l5x_A SurviVal protein E; str 89.1 2.1 7.3E-05 38.3 9.5 109 8-133 1-128 (280)
63 1g5t_A COB(I)alamin adenosyltr 88.8 2.5 8.4E-05 35.7 9.2 98 7-114 28-131 (196)
64 1ccw_A Protein (glutamate muta 88.3 0.66 2.3E-05 36.8 5.1 40 5-44 1-40 (137)
65 2v4n_A Multifunctional protein 87.8 1.6 5.3E-05 38.6 7.6 44 7-52 1-44 (254)
66 2wqk_A 5'-nucleotidase SURE; S 87.1 1.6 5.6E-05 38.5 7.4 109 8-133 2-128 (251)
67 2iz6_A Molybdenum cofactor car 85.9 5.7 0.00019 32.9 9.6 133 257-411 35-173 (176)
68 3q0i_A Methionyl-tRNA formyltr 85.1 3.4 0.00012 37.9 8.7 35 5-44 5-39 (318)
69 1mvl_A PPC decarboxylase athal 84.4 1.5 5E-05 37.5 5.5 47 5-53 17-63 (209)
70 4dzz_A Plasmid partitioning pr 84.3 5 0.00017 33.7 9.1 78 8-113 1-85 (206)
71 1fmt_A Methionyl-tRNA FMet for 83.9 2.7 9.4E-05 38.5 7.5 97 6-134 2-113 (314)
72 3pdi_B Nitrogenase MOFE cofact 83.1 6.2 0.00021 38.3 10.1 88 7-131 313-400 (458)
73 2q5c_A NTRC family transcripti 82.8 8 0.00027 32.6 9.5 108 19-134 36-170 (196)
74 3lqk_A Dipicolinate synthase s 82.8 1.9 6.3E-05 36.7 5.5 47 5-52 5-52 (201)
75 2bw0_A 10-FTHFDH, 10-formyltet 82.6 2.7 9.4E-05 38.8 7.0 103 5-134 20-131 (329)
76 3nb0_A Glycogen [starch] synth 81.4 1.8 6.1E-05 44.1 5.6 47 321-369 489-551 (725)
77 3qjg_A Epidermin biosynthesis 80.3 2.7 9.3E-05 34.8 5.5 44 8-52 6-49 (175)
78 3fgn_A Dethiobiotin synthetase 80.3 8.8 0.0003 33.8 9.3 37 6-42 24-62 (251)
79 3auf_A Glycinamide ribonucleot 80.2 8.6 0.00029 33.3 9.0 105 6-134 21-133 (229)
80 2vo1_A CTP synthase 1; pyrimid 80.0 1.9 6.5E-05 38.0 4.6 44 5-48 20-66 (295)
81 3zqu_A Probable aromatic acid 79.5 1.5 5.1E-05 37.5 3.8 44 7-51 4-47 (209)
82 2ywr_A Phosphoribosylglycinami 79.4 8.7 0.0003 33.0 8.7 104 8-134 2-112 (216)
83 3t5t_A Putative glycosyltransf 77.7 15 0.00052 35.9 10.8 111 323-453 353-473 (496)
84 2vqe_B 30S ribosomal protein S 77.1 12 0.00041 32.9 8.9 32 102-133 157-190 (256)
85 2yxb_A Coenzyme B12-dependent 76.2 2.2 7.4E-05 34.9 3.7 55 6-60 17-75 (161)
86 4b4o_A Epimerase family protei 76.1 2.5 8.6E-05 38.2 4.6 33 8-44 1-33 (298)
87 2g1u_A Hypothetical protein TM 75.9 4.8 0.00016 32.3 5.8 50 4-58 16-67 (155)
88 1sbz_A Probable aromatic acid 75.9 2 6.7E-05 36.4 3.4 43 8-51 1-44 (197)
89 1id1_A Putative potassium chan 75.8 2.3 7.8E-05 34.1 3.8 35 5-44 1-35 (153)
90 1qzu_A Hypothetical protein MD 75.5 3.2 0.00011 35.4 4.7 48 5-53 17-65 (206)
91 4ds3_A Phosphoribosylglycinami 74.5 16 0.00054 31.1 8.8 107 4-134 4-118 (209)
92 3zzm_A Bifunctional purine bio 73.6 4.1 0.00014 39.4 5.3 101 5-113 7-112 (523)
93 3nrb_A Formyltetrahydrofolate 73.3 43 0.0015 30.0 11.8 106 5-134 86-197 (287)
94 3igf_A ALL4481 protein; two-do 73.1 2.1 7.1E-05 40.4 3.2 36 8-43 2-38 (374)
95 2jzc_A UDP-N-acetylglucosamine 72.5 15 0.00052 31.6 8.4 41 7-47 27-74 (224)
96 3u7q_B Nitrogenase molybdenum- 72.2 31 0.0011 34.0 11.5 33 7-44 364-396 (523)
97 2pju_A Propionate catabolism o 72.0 11 0.00038 32.5 7.3 108 19-132 46-180 (225)
98 3vot_A L-amino acid ligase, BL 71.9 28 0.00097 33.0 11.2 95 6-127 4-101 (425)
99 3mcu_A Dipicolinate synthase, 71.7 4.1 0.00014 34.7 4.5 44 6-50 4-48 (207)
100 2qs7_A Uncharacterized protein 71.6 4.8 0.00016 32.1 4.6 52 1-52 2-53 (144)
101 3ug7_A Arsenical pump-driving 71.6 7.6 0.00026 36.1 6.7 38 8-45 26-64 (349)
102 3ghy_A Ketopantoate reductase 71.4 1.5 5.3E-05 40.6 1.9 49 5-58 1-49 (335)
103 3mc3_A DSRE/DSRF-like family p 71.1 7.2 0.00025 30.5 5.5 43 8-50 16-61 (134)
104 1p3y_1 MRSD protein; flavoprot 70.8 2.6 8.9E-05 35.6 3.0 47 5-52 6-52 (194)
105 2i2x_B MTAC, methyltransferase 70.3 6.4 0.00022 34.8 5.6 39 6-44 122-160 (258)
106 3av3_A Phosphoribosylglycinami 70.2 25 0.00085 29.9 9.2 104 8-134 4-114 (212)
107 3rfo_A Methionyl-tRNA formyltr 69.9 22 0.00076 32.4 9.3 34 7-45 4-37 (317)
108 3u7q_A Nitrogenase molybdenum- 69.7 23 0.0008 34.6 10.0 93 7-131 348-442 (492)
109 1jkx_A GART;, phosphoribosylgl 69.3 32 0.0011 29.3 9.6 103 8-134 1-111 (212)
110 3tqq_A Methionyl-tRNA formyltr 69.3 13 0.00044 34.0 7.6 33 7-44 2-34 (314)
111 3pdi_A Nitrogenase MOFE cofact 69.0 20 0.00067 35.0 9.3 91 7-131 332-426 (483)
112 1y80_A Predicted cobalamin bin 68.6 5.6 0.00019 33.9 4.7 38 7-44 88-125 (210)
113 3h7a_A Short chain dehydrogena 67.6 14 0.00046 32.4 7.2 40 1-44 1-40 (252)
114 1qgu_B Protein (nitrogenase mo 67.6 45 0.0015 32.8 11.6 34 7-45 360-393 (519)
115 2gk4_A Conserved hypothetical 67.4 13 0.00044 32.2 6.7 27 18-46 28-54 (232)
116 1mio_A Nitrogenase molybdenum 67.2 15 0.00051 36.3 8.1 34 89-130 447-480 (533)
117 1xmp_A PURE, phosphoribosylami 66.9 50 0.0017 26.8 12.4 142 269-435 11-165 (170)
118 1g63_A Epidermin modifying enz 66.4 6.6 0.00022 32.6 4.5 43 9-52 4-46 (181)
119 2hy5_B Intracellular sulfur ox 66.4 8.4 0.00029 30.3 5.0 50 1-51 1-52 (136)
120 1kjn_A MTH0777; hypotethical p 66.3 4 0.00014 32.3 2.9 45 7-51 6-52 (157)
121 3da8_A Probable 5'-phosphoribo 66.3 9 0.00031 32.8 5.5 117 1-166 6-126 (215)
122 3obi_A Formyltetrahydrofolate 66.1 46 0.0016 29.8 10.4 106 5-134 87-198 (288)
123 1hdo_A Biliverdin IX beta redu 66.0 16 0.00056 30.2 7.3 36 6-45 2-37 (206)
124 3gpi_A NAD-dependent epimerase 65.9 5.3 0.00018 35.7 4.3 48 5-60 1-48 (286)
125 3dhn_A NAD-dependent epimerase 65.6 8.9 0.0003 32.7 5.6 48 8-59 5-52 (227)
126 3zq6_A Putative arsenical pump 65.6 5 0.00017 36.9 4.1 37 9-45 15-52 (324)
127 1uqt_A Alpha, alpha-trehalose- 65.4 29 0.001 33.7 9.7 107 324-453 333-454 (482)
128 3o1l_A Formyltetrahydrofolate 64.9 39 0.0013 30.5 9.7 105 6-134 104-213 (302)
129 3dm5_A SRP54, signal recogniti 64.8 20 0.0007 34.4 8.2 41 8-48 101-141 (443)
130 3n0v_A Formyltetrahydrofolate 64.7 43 0.0015 30.0 9.9 106 5-134 88-198 (286)
131 3oid_A Enoyl-[acyl-carrier-pro 64.0 17 0.00057 31.9 7.2 34 7-43 3-36 (258)
132 3lou_A Formyltetrahydrofolate 63.7 63 0.0021 29.0 10.8 106 5-134 93-203 (292)
133 3ezx_A MMCP 1, monomethylamine 63.6 8.3 0.00028 33.0 4.8 39 6-44 91-129 (215)
134 2c5m_A CTP synthase; cytidine 63.0 5.5 0.00019 34.8 3.4 43 6-48 21-66 (294)
135 2r85_A PURP protein PF1517; AT 62.8 6.5 0.00022 36.0 4.3 33 7-45 2-34 (334)
136 1ydh_A AT5G11950; structural g 62.7 25 0.00087 30.0 7.7 102 257-368 31-143 (216)
137 1yt5_A Inorganic polyphosphate 62.6 4.6 0.00016 35.8 3.1 52 339-412 42-96 (258)
138 1lss_A TRK system potassium up 62.5 6.9 0.00023 30.3 3.9 34 6-44 3-36 (140)
139 4g81_D Putative hexonate dehyd 62.3 21 0.00072 31.4 7.4 80 9-111 10-94 (255)
140 3tqr_A Phosphoribosylglycinami 61.9 29 0.001 29.6 7.9 105 6-134 4-115 (215)
141 2ejb_A Probable aromatic acid 61.4 7.9 0.00027 32.4 4.1 51 8-59 2-53 (189)
142 2i2c_A Probable inorganic poly 61.2 5 0.00017 35.9 3.1 52 339-412 36-93 (272)
143 1e2b_A Enzyme IIB-cellobiose; 61.1 18 0.00062 26.9 5.7 39 5-43 1-39 (106)
144 3g0o_A 3-hydroxyisobutyrate de 61.1 4.5 0.00015 36.8 2.8 38 1-43 1-38 (303)
145 2ew8_A (S)-1-phenylethanol deh 60.3 22 0.00075 30.9 7.2 40 1-44 1-40 (249)
146 1bg6_A N-(1-D-carboxylethyl)-L 59.7 6.1 0.00021 36.7 3.6 34 5-43 2-35 (359)
147 3hn2_A 2-dehydropantoate 2-red 59.7 6.4 0.00022 35.9 3.6 46 8-59 3-48 (312)
148 2r8r_A Sensor protein; KDPD, P 59.5 15 0.00051 31.7 5.6 41 5-45 4-44 (228)
149 3osu_A 3-oxoacyl-[acyl-carrier 59.2 18 0.00061 31.4 6.4 34 8-44 4-37 (246)
150 3tov_A Glycosyl transferase fa 59.1 30 0.001 31.9 8.2 96 8-133 186-289 (349)
151 4gi5_A Quinone reductase; prot 58.3 15 0.00052 32.8 5.7 37 5-41 20-59 (280)
152 3sc4_A Short chain dehydrogena 57.8 20 0.00067 32.0 6.5 34 8-44 9-42 (285)
153 3sju_A Keto reductase; short-c 57.7 22 0.00076 31.5 6.9 37 5-44 21-57 (279)
154 3tox_A Short chain dehydrogena 57.3 31 0.0011 30.6 7.8 34 8-44 8-41 (280)
155 3lyl_A 3-oxoacyl-(acyl-carrier 57.2 28 0.00095 30.0 7.3 34 8-44 5-38 (247)
156 3llv_A Exopolyphosphatase-rela 56.9 6.8 0.00023 30.6 2.9 48 7-59 6-54 (141)
157 2pn1_A Carbamoylphosphate synt 56.8 12 0.00041 34.2 5.0 34 5-44 2-37 (331)
158 3i83_A 2-dehydropantoate 2-red 56.7 5.3 0.00018 36.6 2.5 46 8-59 3-48 (320)
159 1mio_B Nitrogenase molybdenum 56.6 29 0.00099 33.5 7.9 26 103-131 385-410 (458)
160 2a33_A Hypothetical protein; s 56.6 53 0.0018 27.9 8.6 102 258-368 36-147 (215)
161 1psw_A ADP-heptose LPS heptosy 56.3 52 0.0018 29.9 9.4 95 8-132 181-288 (348)
162 3tpc_A Short chain alcohol deh 56.2 28 0.00095 30.3 7.2 33 9-44 8-40 (257)
163 3kvo_A Hydroxysteroid dehydrog 56.1 32 0.0011 31.7 7.9 33 9-44 46-78 (346)
164 3dfz_A SIRC, precorrin-2 dehyd 56.1 55 0.0019 28.0 8.7 150 262-431 26-185 (223)
165 2bln_A Protein YFBG; transfera 55.9 20 0.00067 32.6 6.1 95 8-134 1-107 (305)
166 4eue_A Putative reductase CA_C 55.5 20 0.00067 34.2 6.3 37 7-44 59-95 (418)
167 3edm_A Short chain dehydrogena 55.5 33 0.0011 30.0 7.5 33 8-43 8-40 (259)
168 2hy5_A Putative sulfurtransfer 54.8 30 0.001 26.6 6.4 44 8-51 1-48 (130)
169 1jx7_A Hypothetical protein YC 54.3 16 0.00053 27.4 4.5 36 17-52 14-51 (117)
170 2l2q_A PTS system, cellobiose- 54.3 16 0.00055 27.2 4.5 36 6-41 3-38 (109)
171 3vps_A TUNA, NAD-dependent epi 54.2 11 0.00037 34.1 4.2 41 1-45 1-41 (321)
172 4iin_A 3-ketoacyl-acyl carrier 54.1 23 0.00078 31.2 6.3 33 9-44 30-62 (271)
173 1ehi_A LMDDL2, D-alanine:D-lac 54.1 11 0.00038 35.4 4.4 40 5-44 1-45 (377)
174 2h7i_A Enoyl-[acyl-carrier-pro 53.6 22 0.00075 31.3 6.1 34 9-44 8-42 (269)
175 3hwr_A 2-dehydropantoate 2-red 53.5 4.1 0.00014 37.4 1.2 48 6-58 18-65 (318)
176 2ew2_A 2-dehydropantoate 2-red 53.5 8.7 0.0003 34.7 3.4 47 7-58 3-50 (316)
177 3sbx_A Putative uncharacterize 53.4 85 0.0029 26.0 9.1 99 257-367 34-145 (189)
178 3bbn_B Ribosomal protein S2; s 53.1 30 0.001 29.9 6.4 31 103-133 157-189 (231)
179 3dfu_A Uncharacterized protein 52.7 9.8 0.00033 33.0 3.4 34 6-44 5-38 (232)
180 3kjh_A CO dehydrogenase/acetyl 52.4 10 0.00036 32.7 3.7 38 8-45 1-38 (254)
181 3ucx_A Short chain dehydrogena 52.4 37 0.0013 29.7 7.4 33 9-44 12-44 (264)
182 3nrc_A Enoyl-[acyl-carrier-pro 52.3 25 0.00085 31.2 6.2 35 9-45 27-62 (280)
183 3kcq_A Phosphoribosylglycinami 52.2 37 0.0013 28.9 6.9 106 6-166 7-119 (215)
184 1cyd_A Carbonyl reductase; sho 51.9 18 0.00062 31.1 5.2 40 1-44 1-40 (244)
185 2lnd_A De novo designed protei 51.8 22 0.00075 24.5 4.2 49 358-411 49-100 (112)
186 3trh_A Phosphoribosylaminoimid 51.1 97 0.0033 25.1 12.0 141 270-432 7-157 (169)
187 3ew7_A LMO0794 protein; Q8Y8U8 51.1 16 0.00054 30.8 4.6 48 8-60 1-49 (221)
188 3nbm_A PTS system, lactose-spe 51.0 19 0.00066 26.9 4.4 38 5-42 4-41 (108)
189 2yvq_A Carbamoyl-phosphate syn 50.8 30 0.001 27.2 5.8 99 8-130 25-131 (143)
190 3qvl_A Putative hydantoin race 50.7 84 0.0029 27.3 9.2 37 8-44 2-39 (245)
191 3tjr_A Short chain dehydrogena 50.3 34 0.0012 30.7 6.9 33 9-44 32-64 (301)
192 3afo_A NADH kinase POS5; alpha 49.8 13 0.00044 35.1 3.9 60 331-412 107-171 (388)
193 1rcu_A Conserved hypothetical 49.7 96 0.0033 25.9 8.9 95 257-367 48-149 (195)
194 3kkl_A Probable chaperone prot 49.5 28 0.00095 30.4 5.9 37 8-44 4-51 (244)
195 1t35_A Hypothetical protein YV 49.4 70 0.0024 26.6 8.1 102 257-368 23-135 (191)
196 3l6d_A Putative oxidoreductase 49.4 9.7 0.00033 34.6 3.0 35 4-43 6-40 (306)
197 1e4e_A Vancomycin/teicoplanin 49.3 12 0.00042 34.5 3.7 40 5-44 1-44 (343)
198 3imf_A Short chain dehydrogena 49.2 52 0.0018 28.6 7.8 33 9-44 7-39 (257)
199 4hb9_A Similarities with proba 49.2 11 0.00037 35.4 3.4 30 8-42 2-31 (412)
200 3k96_A Glycerol-3-phosphate de 49.0 11 0.00039 35.0 3.5 35 5-44 27-61 (356)
201 3un1_A Probable oxidoreductase 48.7 59 0.002 28.3 8.1 34 8-44 28-61 (260)
202 3e8x_A Putative NAD-dependent 48.6 19 0.00064 30.9 4.7 52 5-60 19-72 (236)
203 4dmm_A 3-oxoacyl-[acyl-carrier 48.5 31 0.0011 30.3 6.2 33 8-43 28-60 (269)
204 3v8b_A Putative dehydrogenase, 48.4 51 0.0017 29.2 7.7 34 8-44 28-61 (283)
205 2xxa_A Signal recognition part 48.4 29 0.001 33.2 6.3 40 9-48 102-142 (433)
206 4fn4_A Short chain dehydrogena 48.3 32 0.0011 30.2 6.1 34 8-44 7-40 (254)
207 3sxp_A ADP-L-glycero-D-mannohe 48.3 22 0.00075 32.8 5.4 38 3-44 6-45 (362)
208 3aek_B Light-independent proto 48.2 1.1E+02 0.0037 30.1 10.6 91 8-131 281-374 (525)
209 3ot1_A 4-methyl-5(B-hydroxyeth 48.2 50 0.0017 27.7 7.2 49 9-58 11-59 (208)
210 1u0t_A Inorganic polyphosphate 48.2 7.8 0.00027 35.3 2.1 32 335-368 72-107 (307)
211 3ijr_A Oxidoreductase, short c 48.1 45 0.0015 29.7 7.3 34 9-45 48-81 (291)
212 2i87_A D-alanine-D-alanine lig 48.0 9.6 0.00033 35.6 2.8 40 5-44 1-44 (364)
213 3of5_A Dethiobiotin synthetase 47.9 19 0.00064 31.1 4.5 37 6-42 2-40 (228)
214 4ehi_A Bifunctional purine bio 47.6 14 0.00046 35.9 3.7 49 7-61 24-72 (534)
215 2xdq_B Light-independent proto 47.2 74 0.0025 31.1 9.2 88 7-131 303-397 (511)
216 2xj4_A MIPZ; replication, cell 47.0 20 0.0007 31.9 4.8 38 8-45 4-43 (286)
217 4fgs_A Probable dehydrogenase 46.5 17 0.0006 32.3 4.1 33 9-44 30-62 (273)
218 4huj_A Uncharacterized protein 46.5 9.6 0.00033 32.6 2.4 34 5-43 21-54 (220)
219 1o4v_A Phosphoribosylaminoimid 46.4 1.2E+02 0.0042 24.9 9.8 143 269-433 13-163 (183)
220 3fwz_A Inner membrane protein 46.4 10 0.00034 29.7 2.3 48 7-59 7-55 (140)
221 3pgx_A Carveol dehydrogenase; 46.4 36 0.0012 30.1 6.3 32 9-43 16-47 (280)
222 3uve_A Carveol dehydrogenase ( 46.2 42 0.0014 29.7 6.7 33 8-43 11-43 (286)
223 2d1p_B TUSC, hypothetical UPF0 46.1 48 0.0016 25.0 6.1 46 5-51 1-48 (119)
224 3h4t_A Glycosyltransferase GTF 46.1 84 0.0029 29.4 9.2 88 8-130 221-310 (404)
225 3lrx_A Putative hydrogenase; a 46.0 17 0.0006 29.1 3.7 36 8-46 24-59 (158)
226 4dim_A Phosphoribosylglycinami 45.9 19 0.00065 33.9 4.6 35 5-44 5-39 (403)
227 3t7c_A Carveol dehydrogenase; 45.7 35 0.0012 30.5 6.2 34 8-44 28-61 (299)
228 3ksu_A 3-oxoacyl-acyl carrier 45.6 25 0.00086 30.8 5.1 32 9-43 12-43 (262)
229 4dll_A 2-hydroxy-3-oxopropiona 45.4 23 0.0008 32.2 5.0 34 6-44 30-63 (320)
230 3l4b_C TRKA K+ channel protien 44.7 9.1 0.00031 32.6 1.9 33 8-45 1-33 (218)
231 4b4k_A N5-carboxyaminoimidazol 44.7 1.3E+02 0.0044 24.6 13.1 146 268-435 21-176 (181)
232 3i6i_A Putative leucoanthocyan 44.6 18 0.00061 33.2 4.1 95 5-130 8-117 (346)
233 3qua_A Putative uncharacterize 44.6 83 0.0028 26.3 7.8 99 257-367 43-154 (199)
234 2qyt_A 2-dehydropantoate 2-red 44.5 4.5 0.00015 36.8 -0.1 49 6-59 7-62 (317)
235 3r8n_B 30S ribosomal protein S 44.4 29 0.00098 29.7 4.9 115 17-133 38-181 (218)
236 2b8t_A Thymidine kinase; deoxy 44.4 1.2E+02 0.0043 25.7 9.1 38 8-45 12-50 (223)
237 3s55_A Putative short-chain de 44.3 47 0.0016 29.3 6.8 33 9-44 11-43 (281)
238 3u9l_A 3-oxoacyl-[acyl-carrier 44.3 20 0.00068 32.8 4.3 33 8-43 5-37 (324)
239 3pxx_A Carveol dehydrogenase; 44.3 48 0.0017 29.2 6.9 33 9-44 11-43 (287)
240 3tsc_A Putative oxidoreductase 44.2 29 0.00099 30.6 5.3 32 9-43 12-43 (277)
241 3gk3_A Acetoacetyl-COA reducta 44.1 41 0.0014 29.4 6.3 35 7-44 24-58 (269)
242 3rot_A ABC sugar transporter, 44.0 1.4E+02 0.0049 26.0 10.1 88 5-132 1-94 (297)
243 3nva_A CTP synthase; rossman f 43.8 25 0.00084 34.5 4.9 42 7-48 2-46 (535)
244 3h2s_A Putative NADH-flavin re 43.5 18 0.0006 30.6 3.6 49 8-60 1-50 (224)
245 2d1p_A TUSD, hypothetical UPF0 43.5 53 0.0018 25.7 6.1 45 7-51 12-60 (140)
246 3eod_A Protein HNR; response r 43.4 44 0.0015 24.8 5.7 39 1-43 1-39 (130)
247 3ezl_A Acetoacetyl-COA reducta 43.4 48 0.0017 28.6 6.6 35 6-43 11-45 (256)
248 2raf_A Putative dinucleotide-b 43.2 31 0.0011 29.1 5.1 34 6-44 18-51 (209)
249 3gdg_A Probable NADP-dependent 43.0 52 0.0018 28.6 6.8 34 9-44 21-55 (267)
250 1ks9_A KPA reductase;, 2-dehyd 42.6 19 0.00064 32.0 3.8 32 8-44 1-32 (291)
251 3iqw_A Tail-anchored protein t 42.5 25 0.00085 32.4 4.6 40 6-45 14-54 (334)
252 1dhr_A Dihydropteridine reduct 42.4 27 0.00092 30.1 4.7 37 5-44 4-40 (241)
253 1p9o_A Phosphopantothenoylcyst 42.4 18 0.00063 32.8 3.6 23 24-46 68-90 (313)
254 3dqp_A Oxidoreductase YLBE; al 42.4 35 0.0012 28.6 5.4 48 8-60 1-48 (219)
255 3lyu_A Putative hydrogenase; t 41.8 24 0.00081 27.7 3.8 35 8-45 19-53 (142)
256 3gi1_A LBP, laminin-binding pr 41.4 63 0.0022 28.8 7.1 82 33-132 176-259 (286)
257 1wcv_1 SOJ, segregation protei 41.4 21 0.00073 31.1 3.9 40 6-45 4-45 (257)
258 3gem_A Short chain dehydrogena 41.4 28 0.00096 30.5 4.7 34 9-45 28-61 (260)
259 2a5l_A Trp repressor binding p 41.2 33 0.0011 28.4 4.9 38 7-44 5-43 (200)
260 2fwm_X 2,3-dihydro-2,3-dihydro 41.1 1.1E+02 0.0038 26.2 8.6 33 9-44 8-40 (250)
261 3kuu_A Phosphoribosylaminoimid 41.1 1.4E+02 0.0049 24.2 12.5 146 269-436 12-167 (174)
262 2bi7_A UDP-galactopyranose mut 41.0 19 0.00065 33.8 3.7 35 5-44 1-35 (384)
263 3bul_A Methionine synthase; tr 41.0 26 0.0009 34.9 4.7 55 6-60 97-155 (579)
264 1rw7_A YDR533CP; alpha-beta sa 40.9 49 0.0017 28.6 6.2 38 8-45 4-52 (243)
265 3oti_A CALG3; calicheamicin, T 40.8 93 0.0032 28.8 8.6 88 8-130 232-325 (398)
266 1iow_A DD-ligase, DDLB, D-ALA\ 40.6 33 0.0011 30.6 5.2 38 7-44 2-43 (306)
267 3lp6_A Phosphoribosylaminoimid 40.6 1.5E+02 0.005 24.2 10.4 140 269-432 7-156 (174)
268 3ea0_A ATPase, para family; al 40.5 23 0.0008 30.4 4.0 40 6-45 2-44 (245)
269 3gxh_A Putative phosphatase (D 40.5 65 0.0022 25.6 6.4 40 23-62 28-75 (157)
270 3eag_A UDP-N-acetylmuramate:L- 40.3 28 0.00095 31.8 4.6 33 7-43 4-36 (326)
271 2dtx_A Glucose 1-dehydrogenase 40.3 62 0.0021 28.2 6.8 33 9-44 9-41 (264)
272 3ius_A Uncharacterized conserv 40.1 26 0.00088 31.0 4.3 48 8-60 6-54 (286)
273 3l4e_A Uncharacterized peptida 39.9 95 0.0032 26.1 7.6 48 256-303 15-62 (206)
274 3qxc_A Dethiobiotin synthetase 39.9 29 0.00099 30.2 4.4 38 5-42 18-57 (242)
275 3v2g_A 3-oxoacyl-[acyl-carrier 39.8 63 0.0021 28.4 6.8 34 8-44 31-64 (271)
276 3u5t_A 3-oxoacyl-[acyl-carrier 39.8 37 0.0013 29.8 5.2 33 8-43 27-59 (267)
277 2z1m_A GDP-D-mannose dehydrata 39.7 26 0.00089 31.8 4.4 35 6-44 2-36 (345)
278 3e03_A Short chain dehydrogena 39.7 48 0.0016 29.2 6.0 34 8-44 6-39 (274)
279 3ged_A Short-chain dehydrogena 39.1 53 0.0018 28.6 6.0 33 9-44 3-35 (247)
280 4g65_A TRK system potassium up 39.1 9.3 0.00032 37.1 1.2 33 7-44 3-35 (461)
281 4ibo_A Gluconate dehydrogenase 39.0 68 0.0023 28.1 6.9 32 9-43 27-58 (271)
282 2pd6_A Estradiol 17-beta-dehyd 39.0 41 0.0014 29.1 5.5 40 1-44 1-40 (264)
283 2b4q_A Rhamnolipids biosynthes 39.0 1.5E+02 0.0051 25.9 9.2 33 9-44 30-62 (276)
284 1f0y_A HCDH, L-3-hydroxyacyl-C 38.8 19 0.00065 32.5 3.2 33 7-44 15-47 (302)
285 3i12_A D-alanine-D-alanine lig 38.8 20 0.00069 33.4 3.4 40 5-44 1-44 (364)
286 1z7e_A Protein aRNA; rossmann 38.8 28 0.00094 35.5 4.7 95 8-134 1-107 (660)
287 1tvm_A PTS system, galactitol- 38.8 1.2E+02 0.0041 22.5 7.8 38 5-42 19-57 (113)
288 1ihu_A Arsenical pump-driving 38.8 29 0.001 34.7 4.9 45 1-45 1-46 (589)
289 4e21_A 6-phosphogluconate dehy 38.6 21 0.00073 33.2 3.6 35 5-44 20-54 (358)
290 3tl3_A Short-chain type dehydr 38.6 37 0.0013 29.5 5.1 33 8-43 9-41 (257)
291 4da9_A Short-chain dehydrogena 38.3 39 0.0013 29.9 5.2 33 8-43 29-61 (280)
292 3n7t_A Macrophage binding prot 38.3 42 0.0014 29.3 5.2 37 8-44 10-57 (247)
293 3s40_A Diacylglycerol kinase; 38.0 31 0.0011 31.1 4.5 67 284-368 25-97 (304)
294 1gsa_A Glutathione synthetase; 37.9 28 0.00095 31.2 4.2 38 8-45 2-42 (316)
295 2pju_A Propionate catabolism o 37.7 60 0.0021 27.8 6.0 28 341-369 64-91 (225)
296 2dpo_A L-gulonate 3-dehydrogen 37.7 21 0.00072 32.6 3.3 35 5-44 4-38 (319)
297 3r3s_A Oxidoreductase; structu 37.6 94 0.0032 27.6 7.7 34 8-44 49-82 (294)
298 4g6h_A Rotenone-insensitive NA 37.5 19 0.00065 35.3 3.2 36 5-45 40-75 (502)
299 1o4v_A Phosphoribosylaminoimid 37.5 1.7E+02 0.0058 24.0 12.6 104 282-411 52-157 (183)
300 2an1_A Putative kinase; struct 37.4 19 0.00065 32.3 2.9 32 335-368 60-95 (292)
301 3r1i_A Short-chain type dehydr 37.2 50 0.0017 29.1 5.7 33 9-44 33-65 (276)
302 1u7z_A Coenzyme A biosynthesis 37.0 32 0.0011 29.6 4.1 26 18-45 33-58 (226)
303 1qyc_A Phenylcoumaran benzylic 37.0 26 0.0009 31.3 3.9 33 8-44 5-37 (308)
304 1vpd_A Tartronate semialdehyde 36.9 33 0.0011 30.6 4.5 31 8-43 6-36 (299)
305 1z82_A Glycerol-3-phosphate de 36.9 24 0.0008 32.4 3.6 33 7-44 14-46 (335)
306 3oec_A Carveol dehydrogenase ( 36.9 59 0.002 29.3 6.3 33 9-44 47-79 (317)
307 3lzw_A Ferredoxin--NADP reduct 36.8 12 0.00041 33.9 1.5 40 1-45 1-40 (332)
308 3qha_A Putative oxidoreductase 36.7 21 0.0007 32.1 3.1 32 7-43 15-46 (296)
309 1e6u_A GDP-fucose synthetase; 36.7 24 0.00081 31.8 3.5 35 5-43 1-35 (321)
310 2qk4_A Trifunctional purine bi 36.7 2.6E+02 0.009 26.4 11.2 33 7-44 24-57 (452)
311 1cp2_A CP2, nitrogenase iron p 36.6 30 0.001 30.3 4.1 35 10-44 4-38 (269)
312 3e5n_A D-alanine-D-alanine lig 36.6 23 0.00078 33.4 3.4 40 5-44 20-63 (386)
313 3ai3_A NADPH-sorbose reductase 36.6 48 0.0016 28.8 5.5 40 1-44 1-40 (263)
314 2hmt_A YUAA protein; RCK, KTN, 36.5 21 0.00072 27.5 2.8 32 8-44 7-38 (144)
315 3e1t_A Halogenase; flavoprotei 36.5 17 0.00057 35.7 2.6 39 1-44 1-39 (512)
316 3rih_A Short chain dehydrogena 36.5 1.3E+02 0.0046 26.6 8.5 34 8-44 41-74 (293)
317 2rjn_A Response regulator rece 36.5 59 0.002 25.1 5.5 39 1-43 1-39 (154)
318 3cg4_A Response regulator rece 36.4 57 0.0019 24.6 5.4 39 1-43 1-39 (142)
319 2vrn_A Protease I, DR1199; cys 36.3 75 0.0026 26.0 6.4 40 5-45 7-46 (190)
320 2zki_A 199AA long hypothetical 36.2 34 0.0012 28.3 4.3 37 7-44 4-41 (199)
321 3ic5_A Putative saccharopine d 36.2 28 0.00094 25.6 3.3 94 7-134 5-103 (118)
322 3q2i_A Dehydrogenase; rossmann 35.9 96 0.0033 28.4 7.7 123 270-412 15-150 (354)
323 2fb6_A Conserved hypothetical 35.9 38 0.0013 25.6 3.9 41 8-48 8-52 (117)
324 1nff_A Putative oxidoreductase 35.8 47 0.0016 28.9 5.3 40 1-44 1-40 (260)
325 1kyq_A Met8P, siroheme biosynt 35.8 2E+02 0.007 25.3 9.3 151 268-432 13-210 (274)
326 1y1p_A ARII, aldehyde reductas 35.8 34 0.0012 30.9 4.5 36 5-44 9-44 (342)
327 3mjf_A Phosphoribosylamine--gl 35.7 79 0.0027 30.1 7.2 25 7-36 3-27 (431)
328 2w36_A Endonuclease V; hypoxan 35.5 59 0.002 27.8 5.5 32 102-133 102-140 (225)
329 3doj_A AT3G25530, dehydrogenas 35.5 29 0.00099 31.4 3.9 33 6-43 20-52 (310)
330 1pno_A NAD(P) transhydrogenase 35.5 37 0.0013 27.4 3.9 37 8-44 24-63 (180)
331 2afh_E Nitrogenase iron protei 35.4 33 0.0011 30.5 4.3 37 8-44 2-39 (289)
332 3gg2_A Sugar dehydrogenase, UD 35.4 25 0.00086 33.9 3.6 32 8-44 3-34 (450)
333 3l77_A Short-chain alcohol deh 35.4 41 0.0014 28.7 4.7 34 8-44 2-35 (235)
334 3qrx_B Melittin; calcium-bindi 35.3 9.4 0.00032 19.6 0.3 17 349-365 1-17 (26)
335 3dff_A Teicoplanin pseudoaglyc 35.2 39 0.0013 30.0 4.6 44 1-44 1-44 (273)
336 4e3z_A Putative oxidoreductase 35.2 38 0.0013 29.7 4.5 36 5-43 23-58 (272)
337 3gaf_A 7-alpha-hydroxysteroid 35.2 55 0.0019 28.4 5.6 33 9-44 13-45 (256)
338 3slg_A PBGP3 protein; structur 35.1 31 0.001 31.9 4.1 52 5-60 22-76 (372)
339 3enk_A UDP-glucose 4-epimerase 35.0 34 0.0011 31.1 4.3 33 7-43 5-37 (341)
340 4e5v_A Putative THUA-like prot 35.0 42 0.0014 29.9 4.8 38 6-44 3-43 (281)
341 1qkk_A DCTD, C4-dicarboxylate 35.0 1.1E+02 0.0036 23.6 6.9 49 359-413 74-122 (155)
342 3pnx_A Putative sulfurtransfer 34.9 68 0.0023 25.8 5.5 43 10-52 8-50 (160)
343 3pfn_A NAD kinase; structural 34.8 14 0.00047 34.5 1.5 32 334-367 104-139 (365)
344 3ruf_A WBGU; rossmann fold, UD 34.7 33 0.0011 31.4 4.2 35 6-44 24-58 (351)
345 1d4o_A NADP(H) transhydrogenas 34.7 39 0.0013 27.4 3.9 37 8-44 23-62 (184)
346 3pid_A UDP-glucose 6-dehydroge 34.7 26 0.00089 33.5 3.5 34 5-44 34-67 (432)
347 2x4g_A Nucleoside-diphosphate- 34.5 40 0.0014 30.5 4.8 34 7-44 13-46 (342)
348 3alj_A 2-methyl-3-hydroxypyrid 34.4 27 0.00091 32.5 3.6 34 5-43 9-42 (379)
349 3qlj_A Short chain dehydrogena 34.4 65 0.0022 29.1 6.1 32 9-43 28-59 (322)
350 3ego_A Probable 2-dehydropanto 34.4 22 0.00075 32.2 2.8 46 7-58 2-48 (307)
351 3k9g_A PF-32 protein; ssgcid, 34.3 39 0.0013 29.5 4.5 38 6-44 25-64 (267)
352 2q62_A ARSH; alpha/beta, flavo 34.3 52 0.0018 28.7 5.1 39 5-43 32-73 (247)
353 1jay_A Coenzyme F420H2:NADP+ o 34.2 30 0.001 29.0 3.6 31 8-43 1-32 (212)
354 3f67_A Putative dienelactone h 34.0 51 0.0017 27.6 5.1 36 8-43 32-67 (241)
355 3bfv_A CAPA1, CAPB2, membrane 34.0 41 0.0014 29.7 4.6 39 6-44 80-120 (271)
356 1eiw_A Hypothetical protein MT 34.0 71 0.0024 23.9 5.1 65 336-411 36-109 (111)
357 2a33_A Hypothetical protein; s 33.9 46 0.0016 28.3 4.6 40 5-44 10-54 (215)
358 3ors_A N5-carboxyaminoimidazol 33.9 1.8E+02 0.0063 23.3 11.9 142 270-433 4-155 (163)
359 3kl4_A SRP54, signal recogniti 33.9 85 0.0029 30.0 6.9 40 8-47 97-137 (433)
360 2rcy_A Pyrroline carboxylate r 33.8 14 0.00048 32.4 1.4 35 5-44 2-40 (262)
361 3d7l_A LIN1944 protein; APC893 33.8 46 0.0016 27.4 4.7 34 6-44 2-35 (202)
362 4hs4_A Chromate reductase; tri 33.7 23 0.00078 29.7 2.7 37 1-39 1-40 (199)
363 3dfi_A Pseudoaglycone deacetyl 33.6 47 0.0016 29.4 4.9 44 1-44 1-44 (270)
364 3g1w_A Sugar ABC transporter; 33.6 2.4E+02 0.0082 24.5 11.1 85 7-132 4-94 (305)
365 3l7i_A Teichoic acid biosynthe 33.6 13 0.00046 38.3 1.4 111 328-451 605-719 (729)
366 4id9_A Short-chain dehydrogena 33.5 32 0.0011 31.3 4.0 36 6-45 18-53 (347)
367 2rir_A Dipicolinate synthase, 33.5 54 0.0019 29.4 5.4 33 5-42 5-37 (300)
368 3c1o_A Eugenol synthase; pheny 33.5 42 0.0014 30.2 4.7 34 8-45 5-38 (321)
369 3d1l_A Putative NADP oxidoredu 33.3 17 0.00059 31.9 1.9 37 1-42 4-41 (266)
370 1pzg_A LDH, lactate dehydrogen 33.2 23 0.00079 32.5 2.8 34 6-44 8-42 (331)
371 3d3w_A L-xylulose reductase; u 33.2 59 0.002 27.7 5.4 40 1-44 1-40 (244)
372 4e12_A Diketoreductase; oxidor 33.1 33 0.0011 30.5 3.8 32 7-43 4-35 (283)
373 3is3_A 17BETA-hydroxysteroid d 32.7 62 0.0021 28.3 5.6 33 9-44 19-51 (270)
374 3dqz_A Alpha-hydroxynitrIle ly 32.7 28 0.00097 29.5 3.2 36 9-44 5-40 (258)
375 2o1e_A YCDH; alpha-beta protei 32.7 1.1E+02 0.0037 27.7 7.2 83 31-131 185-269 (312)
376 1zmt_A Haloalcohol dehalogenas 32.6 37 0.0013 29.5 4.0 33 8-43 1-33 (254)
377 2b69_A UDP-glucuronate decarbo 32.5 32 0.0011 31.3 3.7 35 5-43 25-59 (343)
378 2rk3_A Protein DJ-1; parkinson 32.5 1.3E+02 0.0044 24.7 7.3 48 8-56 4-51 (197)
379 2z1n_A Dehydrogenase; reductas 32.5 44 0.0015 29.0 4.5 33 9-44 8-40 (260)
380 3io3_A DEHA2D07832P; chaperone 32.4 45 0.0015 30.8 4.6 40 6-45 16-58 (348)
381 3g79_A NDP-N-acetyl-D-galactos 32.3 46 0.0016 32.3 4.9 36 5-45 16-53 (478)
382 2ph1_A Nucleotide-binding prot 32.3 47 0.0016 29.0 4.6 37 8-44 18-56 (262)
383 3afn_B Carbonyl reductase; alp 32.2 37 0.0013 29.3 3.9 36 5-44 5-40 (258)
384 2fsv_C NAD(P) transhydrogenase 32.1 44 0.0015 27.6 3.9 37 8-44 47-86 (203)
385 1xrs_B D-lysine 5,6-aminomutas 32.1 23 0.00077 31.3 2.4 56 6-61 119-187 (262)
386 3rft_A Uronate dehydrogenase; 32.0 47 0.0016 29.0 4.6 48 8-60 3-50 (267)
387 2o6l_A UDP-glucuronosyltransfe 31.9 1.1E+02 0.0036 24.3 6.5 91 8-132 21-114 (170)
388 2pnf_A 3-oxoacyl-[acyl-carrier 31.9 51 0.0017 28.2 4.8 40 1-44 1-40 (248)
389 2q5c_A NTRC family transcripti 31.8 50 0.0017 27.6 4.5 31 339-370 50-80 (196)
390 3guy_A Short-chain dehydrogena 31.7 38 0.0013 28.8 3.9 34 8-44 1-34 (230)
391 3l18_A Intracellular protease 31.7 1E+02 0.0034 24.5 6.3 51 6-58 1-51 (168)
392 3l8h_A Putative haloacid dehal 31.6 1.8E+02 0.0062 22.9 8.0 23 24-46 32-54 (179)
393 4fu0_A D-alanine--D-alanine li 31.5 31 0.0011 31.9 3.4 39 5-43 1-43 (357)
394 1djl_A Transhydrogenase DIII; 31.4 46 0.0016 27.6 3.9 37 8-44 46-85 (207)
395 2iz1_A 6-phosphogluconate dehy 31.4 28 0.00096 33.8 3.2 34 5-43 3-36 (474)
396 3goc_A Endonuclease V; alpha-b 31.4 60 0.002 28.0 4.8 40 90-132 97-143 (237)
397 3qvo_A NMRA family protein; st 31.3 79 0.0027 26.8 5.9 50 8-60 23-74 (236)
398 1g8m_A Aicar transformylase-IM 31.3 17 0.00059 35.7 1.6 96 8-112 6-105 (593)
399 1txg_A Glycerol-3-phosphate de 31.1 26 0.00088 31.9 2.8 31 8-43 1-31 (335)
400 1wek_A Hypothetical protein TT 31.1 1.4E+02 0.0047 25.4 7.1 98 257-366 59-168 (217)
401 3gl9_A Response regulator; bet 31.1 74 0.0025 23.4 5.1 32 103-134 46-86 (122)
402 3cky_A 2-hydroxymethyl glutara 31.0 50 0.0017 29.4 4.7 32 7-43 4-35 (301)
403 3dtt_A NADP oxidoreductase; st 31.0 38 0.0013 29.3 3.8 36 5-45 17-52 (245)
404 2woo_A ATPase GET3; tail-ancho 31.0 51 0.0018 30.1 4.8 39 8-46 19-58 (329)
405 3m1a_A Putative dehydrogenase; 30.9 41 0.0014 29.6 4.0 34 8-44 5-38 (281)
406 2h78_A Hibadh, 3-hydroxyisobut 30.9 38 0.0013 30.3 3.9 32 7-43 3-34 (302)
407 2r6j_A Eugenol synthase 1; phe 30.9 42 0.0014 30.1 4.2 33 9-45 13-45 (318)
408 3q9l_A Septum site-determining 30.8 51 0.0018 28.4 4.7 38 8-45 2-41 (260)
409 2xdo_A TETX2 protein; tetracyc 30.7 37 0.0013 31.8 3.9 35 5-44 24-58 (398)
410 3s8m_A Enoyl-ACP reductase; ro 30.4 83 0.0028 29.9 6.1 35 7-44 60-95 (422)
411 3c24_A Putative oxidoreductase 30.4 41 0.0014 29.8 4.0 31 8-43 12-43 (286)
412 3hly_A Flavodoxin-like domain; 30.3 67 0.0023 25.6 4.9 36 8-43 1-37 (161)
413 4gbj_A 6-phosphogluconate dehy 30.2 46 0.0016 29.9 4.3 28 9-41 7-34 (297)
414 2dkn_A 3-alpha-hydroxysteroid 30.2 44 0.0015 28.6 4.1 34 8-44 1-34 (255)
415 3g17_A Similar to 2-dehydropan 30.2 15 0.00051 33.1 0.9 32 8-44 3-34 (294)
416 1fjh_A 3alpha-hydroxysteroid d 30.2 60 0.0021 27.9 5.0 34 8-44 1-34 (257)
417 2vns_A Metalloreductase steap3 30.1 33 0.0011 29.0 3.1 34 6-44 27-60 (215)
418 2pk3_A GDP-6-deoxy-D-LYXO-4-he 30.1 42 0.0014 30.1 4.1 36 7-45 11-46 (321)
419 3lp8_A Phosphoribosylamine-gly 30.1 1.6E+02 0.0055 28.0 8.4 32 6-42 20-52 (442)
420 3c85_A Putative glutathione-re 30.0 31 0.0011 28.1 2.9 48 6-58 38-87 (183)
421 1zi8_A Carboxymethylenebutenol 30.0 67 0.0023 26.6 5.2 37 8-44 28-64 (236)
422 2pzm_A Putative nucleotide sug 29.9 37 0.0013 30.7 3.7 35 5-43 18-52 (330)
423 1o97_C Electron transferring f 29.8 69 0.0024 28.2 5.2 40 88-132 102-147 (264)
424 4gkb_A 3-oxoacyl-[acyl-carrier 29.8 90 0.0031 27.3 6.0 33 9-44 8-40 (258)
425 1u11_A PURE (N5-carboxyaminoim 29.7 2.3E+02 0.0079 23.2 12.2 141 270-435 22-175 (182)
426 3lk7_A UDP-N-acetylmuramoylala 29.5 61 0.0021 31.1 5.3 34 5-43 7-40 (451)
427 1t1j_A Hypothetical protein; s 29.5 66 0.0022 24.7 4.3 33 7-39 7-47 (125)
428 1fy2_A Aspartyl dipeptidase; s 29.5 1.1E+02 0.0039 26.0 6.5 46 256-303 21-66 (229)
429 4e4t_A Phosphoribosylaminoimid 29.4 51 0.0017 31.3 4.6 38 2-44 30-67 (419)
430 1vkz_A Phosphoribosylamine--gl 29.4 24 0.00084 33.4 2.4 31 5-41 13-44 (412)
431 3gt7_A Sensor protein; structu 29.4 79 0.0027 24.4 5.2 39 1-43 1-39 (154)
432 1d7o_A Enoyl-[acyl-carrier pro 29.4 66 0.0023 28.5 5.2 32 9-42 9-41 (297)
433 3f6r_A Flavodoxin; FMN binding 29.4 72 0.0025 24.7 4.9 38 8-45 2-40 (148)
434 2qv5_A AGR_C_5032P, uncharacte 29.3 2.9E+02 0.0098 24.1 9.7 41 87-131 141-184 (261)
435 3s2u_A UDP-N-acetylglucosamine 29.2 1.4E+02 0.0047 27.5 7.5 27 338-366 92-121 (365)
436 2ab0_A YAJL; DJ-1/THIJ superfa 29.2 1.5E+02 0.0052 24.5 7.2 38 8-46 3-40 (205)
437 1qyd_A Pinoresinol-lariciresin 29.2 46 0.0016 29.7 4.2 34 7-44 4-37 (313)
438 2x5n_A SPRPN10, 26S proteasome 29.2 73 0.0025 26.4 5.1 37 8-44 107-144 (192)
439 2zyd_A 6-phosphogluconate dehy 29.2 29 0.001 33.7 2.9 34 5-43 13-46 (480)
440 3foj_A Uncharacterized protein 29.1 99 0.0034 22.0 5.3 32 8-43 57-88 (100)
441 2bon_A Lipid kinase; DAG kinas 29.0 1E+02 0.0035 28.0 6.5 82 268-369 30-119 (332)
442 2bru_C NAD(P) transhydrogenase 29.0 43 0.0015 27.1 3.2 35 8-44 31-70 (186)
443 3ko8_A NAD-dependent epimerase 29.0 49 0.0017 29.5 4.3 49 8-60 1-50 (312)
444 3oh8_A Nucleoside-diphosphate 28.9 53 0.0018 32.1 4.8 35 7-45 147-181 (516)
445 1mv8_A GMD, GDP-mannose 6-dehy 28.8 50 0.0017 31.5 4.5 31 8-43 1-31 (436)
446 2c29_D Dihydroflavonol 4-reduc 28.6 48 0.0016 30.0 4.2 33 8-43 5-37 (337)
447 3r5x_A D-alanine--D-alanine li 28.5 31 0.0011 30.9 2.8 40 6-45 2-45 (307)
448 1rkx_A CDP-glucose-4,6-dehydra 28.5 48 0.0017 30.3 4.2 36 5-44 7-42 (357)
449 4grd_A N5-CAIR mutase, phospho 28.5 2.4E+02 0.0081 22.9 12.1 144 268-433 11-164 (173)
450 3pg5_A Uncharacterized protein 28.4 42 0.0014 31.1 3.8 37 8-44 1-39 (361)
451 3md9_A Hemin-binding periplasm 28.4 56 0.0019 28.2 4.4 29 103-131 59-89 (255)
452 3fwy_A Light-independent proto 28.4 61 0.0021 29.4 4.8 39 7-45 47-86 (314)
453 2q2v_A Beta-D-hydroxybutyrate 28.3 98 0.0033 26.6 6.0 33 9-44 5-37 (255)
454 3pm6_A Putative fructose-bisph 28.2 3.3E+02 0.011 24.4 10.0 24 254-279 172-195 (306)
455 3kkj_A Amine oxidase, flavin-c 28.0 38 0.0013 28.9 3.3 28 10-42 5-32 (336)
456 2gf2_A Hibadh, 3-hydroxyisobut 28.0 37 0.0013 30.2 3.3 31 8-43 1-31 (296)
457 2qv7_A Diacylglycerol kinase D 28.0 1.1E+02 0.0037 27.9 6.5 81 271-368 28-114 (337)
458 3r6d_A NAD-dependent epimerase 27.9 61 0.0021 27.1 4.5 35 8-45 5-40 (221)
459 2c07_A 3-oxoacyl-(acyl-carrier 27.9 1.2E+02 0.0042 26.5 6.7 31 9-42 45-75 (285)
460 2vou_A 2,6-dihydroxypyridine h 27.9 46 0.0016 31.1 4.0 35 5-44 3-37 (397)
461 3ioy_A Short-chain dehydrogena 27.9 81 0.0028 28.4 5.6 34 8-44 8-41 (319)
462 3pef_A 6-phosphogluconate dehy 27.8 46 0.0016 29.5 3.8 32 8-44 2-33 (287)
463 2wsb_A Galactitol dehydrogenas 27.8 82 0.0028 26.9 5.4 33 9-44 12-44 (254)
464 4hn9_A Iron complex transport 27.8 46 0.0016 30.4 3.9 30 103-132 116-145 (335)
465 3o1l_A Formyltetrahydrofolate 27.8 1.1E+02 0.0038 27.5 6.3 107 283-409 166-274 (302)
466 4fbl_A LIPS lipolytic enzyme; 27.6 45 0.0015 29.2 3.7 32 11-42 54-85 (281)
467 4eg0_A D-alanine--D-alanine li 27.6 71 0.0024 28.7 5.1 38 7-44 13-54 (317)
468 3eme_A Rhodanese-like domain p 27.6 90 0.0031 22.4 4.8 32 8-43 57-88 (103)
469 3f5d_A Protein YDEA; unknow pr 27.5 78 0.0027 26.6 5.0 38 8-46 4-42 (206)
470 2woj_A ATPase GET3; tail-ancho 27.4 53 0.0018 30.4 4.3 38 8-45 18-58 (354)
471 1yb4_A Tartronic semialdehyde 27.4 42 0.0014 29.8 3.5 31 7-42 3-33 (295)
472 3fkq_A NTRC-like two-domain pr 27.3 52 0.0018 30.6 4.2 39 6-44 141-181 (373)
473 4ggo_A Trans-2-enoyl-COA reduc 27.3 98 0.0034 29.1 5.9 84 7-113 49-150 (401)
474 3qsg_A NAD-binding phosphogluc 27.3 32 0.0011 31.1 2.7 34 6-44 23-57 (312)
475 1q1v_A DEK protein; winged-hel 27.3 90 0.0031 21.1 4.2 55 396-452 11-67 (70)
476 2ixd_A LMBE-related protein; h 27.2 58 0.002 28.2 4.2 39 5-43 1-39 (242)
477 1pq4_A Periplasmic binding pro 27.2 2E+02 0.0069 25.5 8.0 82 31-132 185-268 (291)
478 2lpm_A Two-component response 27.2 45 0.0016 25.4 3.1 30 103-132 53-87 (123)
479 1mkz_A Molybdenum cofactor bio 27.1 1.1E+02 0.0038 24.8 5.7 37 5-42 8-48 (172)
480 1oc2_A DTDP-glucose 4,6-dehydr 27.1 41 0.0014 30.6 3.5 34 8-44 4-39 (348)
481 1u9c_A APC35852; structural ge 27.0 1.1E+02 0.0038 25.7 6.1 37 9-45 7-52 (224)
482 1xgk_A Nitrogen metabolite rep 26.9 58 0.002 29.9 4.4 35 6-44 4-38 (352)
483 3a28_C L-2.3-butanediol dehydr 26.8 80 0.0027 27.3 5.2 33 9-44 3-35 (258)
484 1byi_A Dethiobiotin synthase; 26.7 56 0.0019 27.4 4.0 32 10-41 4-36 (224)
485 2ywx_A Phosphoribosylaminoimid 26.6 2.4E+02 0.0083 22.4 12.1 133 272-432 2-144 (157)
486 1udb_A Epimerase, UDP-galactos 26.5 62 0.0021 29.2 4.6 31 8-42 1-31 (338)
487 4e08_A DJ-1 beta; flavodoxin-l 26.5 1.9E+02 0.0066 23.4 7.3 50 8-58 6-55 (190)
488 1f4p_A Flavodoxin; electron tr 26.5 53 0.0018 25.5 3.6 36 8-43 1-37 (147)
489 4amg_A Snogd; transferase, pol 26.5 1.5E+02 0.0051 27.2 7.4 88 8-130 237-330 (400)
490 2gdz_A NAD+-dependent 15-hydro 26.4 84 0.0029 27.3 5.3 33 9-44 8-40 (267)
491 3f8d_A Thioredoxin reductase ( 26.4 44 0.0015 29.7 3.5 32 8-44 16-47 (323)
492 4h15_A Short chain alcohol deh 26.4 66 0.0022 28.2 4.5 33 9-44 12-44 (261)
493 3i4f_A 3-oxoacyl-[acyl-carrier 26.3 63 0.0021 28.0 4.4 35 7-44 6-40 (264)
494 1kjq_A GART 2, phosphoribosylg 26.3 63 0.0021 30.1 4.6 35 6-45 10-44 (391)
495 4eso_A Putative oxidoreductase 26.2 81 0.0028 27.3 5.1 34 8-44 8-41 (255)
496 3ka7_A Oxidoreductase; structu 26.2 40 0.0014 31.8 3.2 32 8-44 1-32 (425)
497 3ia7_A CALG4; glycosysltransfe 26.2 2.6E+02 0.009 25.4 9.1 88 8-130 231-323 (402)
498 3sbx_A Putative uncharacterize 26.2 91 0.0031 25.9 5.0 38 6-44 12-53 (189)
499 1evy_A Glycerol-3-phosphate de 26.1 31 0.0011 32.0 2.4 32 8-44 15-47 (366)
500 1rpn_A GDP-mannose 4,6-dehydra 26.0 64 0.0022 29.0 4.6 36 5-44 12-47 (335)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.7e-66 Score=509.39 Aligned_cols=428 Identities=25% Similarity=0.418 Sum_probs=347.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEecCccccccCC------CCceEEEcCCCCCCCCCCCCCCHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKR--VKATLATTHYTVKSIHA------TTVGVEPISDGFDEGGFKQAPSVKA 77 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~G--h~V~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (459)
++.||+++|+|+.||++|++.||+.|+++| +.|||++++.+...+.+ ++++|+.+|++++.+..... +...
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~-~~~~ 90 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSG-NPRE 90 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCS-CTTH
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccC-ChHH
Confidence 468999999999999999999999999999 99999999855444322 47999999988876543222 2223
Q ss_pred HHHHHHHhchHHHHHHHHHhh-cCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCC--CC
Q 012645 78 YLESFKTVGSRTLAEVILKYK-DSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLP--VN 154 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p--~~ 154 (459)
.+..+.......+++.++++. +...++|+||+|.++.|+..+|+++|||++.+++++++.+..+.+.+....... ..
T Consensus 91 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~ 170 (454)
T 3hbf_A 91 PIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEV 170 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCcc
Confidence 333333333445555555542 223478999999999999999999999999999999888877666542111100 00
Q ss_pred CCCCcc-cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecccC
Q 012645 155 QETVPL-TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGPLV 232 (459)
Q Consensus 155 ~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp~~ 232 (459)
..+..+ .+|++|++..++++.++.. .....+.+.+.+......+++++++||+++||++..+.+... +++++|||+.
T Consensus 171 ~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~vGPl~ 249 (454)
T 3hbf_A 171 HDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFN 249 (454)
T ss_dssp TTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEECCCHH
T ss_pred ccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEEECCcc
Confidence 011223 3899998888899887653 334456677777777888899999999999999888877654 5799999987
Q ss_pred CCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CC
Q 012645 233 PSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NK 311 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~ 311 (459)
.... ......++++.+||+.++++++|||||||+.....+.+.+++.+++..+++|||+++... ..
T Consensus 250 ~~~~-------------~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~ 316 (454)
T 3hbf_A 250 LTTP-------------QRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEK 316 (454)
T ss_dssp HHSC-------------CSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHH
T ss_pred cccc-------------cccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhc
Confidence 5310 000123556999999988899999999999988889999999999999999999998754 46
Q ss_pred CchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeee
Q 012645 312 LPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 312 ~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
+|++|.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||+|+.+..
T Consensus 317 lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~ 396 (454)
T 3hbf_A 317 LPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN 396 (454)
T ss_dssp SCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG
T ss_pred CCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC
Confidence 88889888999999999999999999999888999999999999999999999999999999999999994499999987
Q ss_pred cCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 392 NRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
. .++.+.|.++|+++|+++++++||+||+++++++++++.+||||...+++|+++|.
T Consensus 397 ~---~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 397 G---VLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp G---SCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred C---CCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 6 79999999999999998777789999999999999999999999999999999874
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.9e-61 Score=482.51 Aligned_cols=434 Identities=27% Similarity=0.461 Sum_probs=326.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCc--cccccC------CCCceEEEcCCCCCCCCCCC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHY--TVKSIH------ATTVGVEPISDGFDEGGFKQ 71 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~--~~~~~~------~~g~~~~~~~~~~~~~~~~~ 71 (459)
|+. .+++||+++|+|+.||++|++.||++|++| ||+|||++++. +...++ ..+++|+++|....... ..
T Consensus 1 M~~-~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~ 78 (480)
T 2vch_A 1 MEE-SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDL-SS 78 (480)
T ss_dssp ------CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTS-CT
T ss_pred CCC-CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCC-CC
Confidence 544 466899999999999999999999999998 99999999987 444443 26899999986421111 11
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCc-cEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccC--
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDSESPV-NCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGL-- 148 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~-- 148 (459)
..+....+........+.++++++.+. ...++ |+||+|.++.|+..+|+++|||++.++++++.......+.+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~ll~~~~-~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 79 STRIESRISLTVTRSNPELRKVFDSFV-EGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp TCCHHHHHHHHHHTTHHHHHHHHHHHH-HTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhhhHHHHHHHHHhc-cCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 123333333344455667788887763 12377 99999999999999999999999999999877665554332110
Q ss_pred CCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc----CCC
Q 012645 149 LTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG----LWP 224 (459)
Q Consensus 149 ~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~ 224 (459)
...+.........+|+++++...+++..+... . ......+.+....+++.+++++|++.++++.....+.+ .++
T Consensus 158 ~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~ 235 (480)
T 2vch_A 158 VSCEFRELTEPLMLPGCVPVAGKDFLDPAQDR-K-DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPP 235 (480)
T ss_dssp CCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCT-T-SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCC
T ss_pred CCCcccccCCcccCCCCCCCChHHCchhhhcC-C-chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCc
Confidence 01110000112346777766666666554321 1 12334445555566778899999999999987777754 357
Q ss_pred eeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 012645 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWV 304 (459)
Q Consensus 225 ~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~ 304 (459)
+++|||+..... +. . ..+.++++.+||+.++++++|||||||+.....+.+..++++++.++++|||+
T Consensus 236 v~~vGpl~~~~~-----~~------~-~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~ 303 (480)
T 2vch_A 236 VYPVGPLVNIGK-----QE------A-KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWV 303 (480)
T ss_dssp EEECCCCCCCSC-----SC------C------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeccccccc-----cc------c-CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 999999875410 00 0 01245679999999888899999999998888899999999999999999999
Q ss_pred EeCCC-----------------CCCchhhhhhcCCCceEEe-eecHHHHhcccCccceeccCchhhHHHhhhcCCeeecc
Q 012645 305 VKENE-----------------NKLPVEFVNSVGETGLVVR-WCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAV 366 (459)
Q Consensus 305 ~~~~~-----------------~~~~~~~~~~~~~~v~v~~-~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~ 366 (459)
++... ..+|++|.++..++.+++. |+||.+||+|++|++||||||+||++||+++|||||++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~ 383 (480)
T 2vch_A 304 IRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAW 383 (480)
T ss_dssp ECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred ECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEec
Confidence 97632 1366777666666667776 99999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHH-HHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Q 012645 367 PQFSDQPTNAKFV-EEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDE 445 (459)
Q Consensus 367 P~~~DQ~~na~rv-~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~ 445 (459)
|++.||+.||+++ +++ |+|+.+....++.++.+.|.++|+++|++.++++||+||+++++++++++.+||+|..++++
T Consensus 384 P~~~DQ~~na~~l~~~~-G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~ 462 (480)
T 2vch_A 384 PLYAEQKMNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSL 462 (480)
T ss_dssp CCSTTHHHHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred cccccchHHHHHHHHHh-CeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 9999999999997 678 99999875322368999999999999984434499999999999999999999999999999
Q ss_pred HHHHHHH
Q 012645 446 FVVRLLK 452 (459)
Q Consensus 446 ~~~~l~~ 452 (459)
|++++.+
T Consensus 463 ~v~~~~~ 469 (480)
T 2vch_A 463 VALKWKA 469 (480)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=8.5e-62 Score=488.04 Aligned_cols=445 Identities=30% Similarity=0.559 Sum_probs=333.5
Q ss_pred CCCC-CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC----------CCceEEEcCCCCCCCC-
Q 012645 1 MENQ-RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA----------TTVGVEPISDGFDEGG- 68 (459)
Q Consensus 1 m~~~-~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~- 68 (459)
|.+. |+++||+++|+++.||++|++.||++|++|||+|||++++.+...+.+ ++++|+++|++++...
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~ 80 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEG 80 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC----
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCccc
Confidence 4444 456899999999999999999999999999999999999887655433 3899999997666521
Q ss_pred -CCCCCCHHHHHHHHHHhchHHHHHHHHHhhcC--CCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhh
Q 012645 69 -FKQAPSVKAYLESFKTVGSRTLAEVILKYKDS--ESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQIN 145 (459)
Q Consensus 69 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~ 145 (459)
.....+...++..+...+...++++++.+... ..++|+||+|.++.|+..+|+++|||++.++++++.......+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 160 (482)
T 2pq6_A 81 DGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFR 160 (482)
T ss_dssp -----CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHH
T ss_pred ccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHH
Confidence 11123444555555456677888888887632 348999999999999999999999999999998876554433221
Q ss_pred ----ccCCCCCCCC---C---CCcc-cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHH
Q 012645 146 ----HGLLTLPVNQ---E---TVPL-TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKE 214 (459)
Q Consensus 146 ----~~~~~~p~~~---~---~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (459)
.+..+..... . .... .+|+++.+...+++.+...........+.+.+......+++++++|++++||++
T Consensus 161 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~ 240 (482)
T 2pq6_A 161 SFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESD 240 (482)
T ss_dssp HHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHH
T ss_pred HHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHH
Confidence 2222221110 0 1111 356666555556665554332233344455555556677899999999999998
Q ss_pred HHHHHhcC-CCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHH
Q 012645 215 LLRAMLGL-WPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARG 293 (459)
Q Consensus 215 ~~~~~~~~-~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a 293 (459)
..+.+... +++++|||+............+...+...|. .+.++.+||+.++++++|||||||+.....+.+..++++
T Consensus 241 ~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 319 (482)
T 2pq6_A 241 VINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWK-EDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWG 319 (482)
T ss_dssp HHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEEcCCcccccccccccccccccccccc-cchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHH
Confidence 77776653 5799999986420000000000000011122 244589999998888999999999987788889999999
Q ss_pred HHhCCCcEEEEEeCCC-----CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeecccc
Q 012645 294 LKASEKPFLWVVKENE-----NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ 368 (459)
Q Consensus 294 ~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~ 368 (459)
++..+++|||+++... ..+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+
T Consensus 320 l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~ 399 (482)
T 2pq6_A 320 LANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPF 399 (482)
T ss_dssp HHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCc
Confidence 9999999999987532 12778888788999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHH-HhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 012645 369 FSDQPTNAKFVE-EVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447 (459)
Q Consensus 369 ~~DQ~~na~rv~-~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~ 447 (459)
+.||+.||++++ +. |+|+.+. . .++++.|.++|+++|+|+++++||+||+++++++++++.+||||..++++|+
T Consensus 400 ~~dQ~~na~~~~~~~-G~g~~l~-~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v 474 (482)
T 2pq6_A 400 FADQPTDCRFICNEW-EIGMEID-T---NVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVI 474 (482)
T ss_dssp STTHHHHHHHHHHTS-CCEEECC-S---SCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHh-CEEEEEC-C---CCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 999999999997 67 9999998 5 7999999999999999986667999999999999999999999999999999
Q ss_pred HHHH
Q 012645 448 VRLL 451 (459)
Q Consensus 448 ~~l~ 451 (459)
+++.
T Consensus 475 ~~~~ 478 (482)
T 2pq6_A 475 KDVL 478 (482)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 9874
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=5.6e-61 Score=477.40 Aligned_cols=434 Identities=30% Similarity=0.496 Sum_probs=324.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEecCccccccC-------CCCceEEEcCCCCCCCCCCC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVK--ATLATTHYTVKSIH-------ATTVGVEPISDGFDEGGFKQ 71 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~--V~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~~~~~ 71 (459)
|+..++++||+++|+|+.||++|++.||+.|++|||+ |||++++.....+. ..+++|++++++++.... .
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~-~ 79 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYV-F 79 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCC-C
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCccc-c
Confidence 6666778999999999999999999999999999755 57788764333221 148999999877665421 1
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcC-CCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhh-----
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDS-ESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQIN----- 145 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~----- 145 (459)
.......+..+.......++++++++.+. ..++|+||+|.++.|+..+|+++|||+|.++++++..+....+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (456)
T 2c1x_A 80 AGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREK 159 (456)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHH
T ss_pred cCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhc
Confidence 11222333333333344455555543311 248999999999999999999999999999998876554433211
Q ss_pred ccCCCCCCCCC-CCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc-CC
Q 012645 146 HGLLTLPVNQE-TVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG-LW 223 (459)
Q Consensus 146 ~~~~~~p~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~ 223 (459)
.+.... .... .....+|+++.+...+++..+........+.+.+.+......+++++++|+++++|++..+.+.. .+
T Consensus 160 ~~~~~~-~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~ 238 (456)
T 2c1x_A 160 IGVSGI-QGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLK 238 (456)
T ss_dssp HCSSCC-TTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSS
T ss_pred cCCccc-ccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCC
Confidence 011110 0000 11124788776555555543322222223344444554555678999999999999987666654 35
Q ss_pred CeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 012645 224 PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLW 303 (459)
Q Consensus 224 ~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~ 303 (459)
++++|||+..... . .. .+.+.++.+|++.++++++|||||||......+.+..++++++..+++|||
T Consensus 239 ~~~~vGpl~~~~~----~--------~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw 305 (456)
T 2c1x_A 239 TYLNIGPFNLITP----P--------PV-VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIW 305 (456)
T ss_dssp CEEECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CEEEecCcccCcc----c--------cc-ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEE
Confidence 7999999864310 0 00 012345889999988889999999999887888899999999999999999
Q ss_pred EEeCCC-CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHh
Q 012645 304 VVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEV 382 (459)
Q Consensus 304 ~~~~~~-~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~ 382 (459)
+++... ..+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.
T Consensus 306 ~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~ 385 (456)
T 2c1x_A 306 SLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDV 385 (456)
T ss_dssp ECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT
T ss_pred EECCcchhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHH
Confidence 998654 4577888777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 383 WEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 383 ~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
||+|+.+... .++.+.|.++|+++|+|+++++||+||+++++.+++++.+||||..++++|++++.+
T Consensus 386 ~g~g~~l~~~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 386 LEIGVRIEGG---VFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp SCCEEECGGG---SCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred hCeEEEecCC---CcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 9999999866 799999999999999987667899999999999999999999999999999999853
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=5.6e-60 Score=471.47 Aligned_cols=427 Identities=26% Similarity=0.453 Sum_probs=326.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccc-----cccC-----CCCceEEEcCCC-CCCCCCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTV-----KSIH-----ATTVGVEPISDG-FDEGGFKQ 71 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~-----~~~~-----~~g~~~~~~~~~-~~~~~~~~ 71 (459)
++++||+++|+|+.||++|++.||+.|+++ ||+|||++++.+. +.++ ..+++|+++|+. ++.. +.
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~--~~ 84 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQ--EL 84 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCG--GG
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcc--cc
Confidence 457899999999999999999999999999 9999999998752 2221 158999999865 2221 10
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCC
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTL 151 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 151 (459)
.......+..........++++++++ ...++|+||+|.++.|+..+|+++|||++.++++++.......+.+......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~--~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTI--LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEE 162 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHH--CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTC
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhc--cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccC
Confidence 11111112233344566778888775 2348999999999999999999999999999998877766655544322111
Q ss_pred CCCCCCC---cccCCCC-CCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc----CC
Q 012645 152 PVNQETV---PLTLPGL-PSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG----LW 223 (459)
Q Consensus 152 p~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~ 223 (459)
+....+. ...+|++ +++...+++..+... . .....+.+....+++.+++++++++++|+...+.+.+ .+
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~--~-~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~ 239 (463)
T 2acv_A 163 VFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK--D-GGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIP 239 (463)
T ss_dssp CCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT--T-THHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSC
T ss_pred CCCCccccCceeECCCCCCCCChHHCchhhcCC--c-hHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCC
Confidence 1111111 3457887 666655555443322 1 1334445555566778899999999999988777765 45
Q ss_pred CeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCcEE
Q 012645 224 PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA-DIAANQVDEIARGLKASEKPFL 302 (459)
Q Consensus 224 ~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~i~~a~~~~~~~~v 302 (459)
++++|||+..... .+.. + .. .+.++++.+|++.++++++|||||||+. ....+.+..++++++..+++||
T Consensus 240 ~v~~vGpl~~~~~----~~~~---~-~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 240 PIYAVGPLLDLKG----QPNP---K-LD-QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp CEEECCCCCCSSC----CCBT---T-BC-HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cEEEeCCCccccc----cccc---c-cc-cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 7999999976410 0000 0 00 0235678999999888899999999998 7788889999999999999999
Q ss_pred EEEeCCCCCCchhhhhhc--CCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHH-
Q 012645 303 WVVKENENKLPVEFVNSV--GETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFV- 379 (459)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~--~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv- 379 (459)
|+++.....+++++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++
T Consensus 311 ~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv 390 (463)
T 2acv_A 311 WSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV 390 (463)
T ss_dssp EECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH
T ss_pred EEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHH
Confidence 999752124677777676 88999999999999999999999999999999999999999999999999999999995
Q ss_pred HHhhhceEEee-ecCCC--cccHHHHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 380 EEVWEVGVRAK-KNRAG--IVTGEELNKCVNEVMD-GERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 380 ~~~~G~G~~~~-~~~~~--~~~~~~l~~~i~~ll~-~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
++. |+|+.+. ....+ .++.+.|.++|+++|+ ++ +||+||+++++.+++++.+||+|..++++|++++.
T Consensus 391 ~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 391 KEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 788 9999983 11112 4899999999999997 45 89999999999999999999999999999999985
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.7e-46 Score=369.92 Aligned_cols=398 Identities=17% Similarity=0.203 Sum_probs=270.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC---CCCCHHHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK---QAPSVKAYLES 81 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 81 (459)
|++|||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+++.|++|++++..++..... ...+....+..
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILPKESNPEESWPEDQESAMGL 89 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCCCSCCTTCTTCCCCSSHHHHHHH
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCccccccccchhhcchhHHHHHHH
Confidence 567899999999999999999999999999999999999998888888899999998665432111 12233333333
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCccc
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLT 161 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (459)
+..........+.+.+++. +||+||+|.++.++..+|+++|||++.+++.+.................. +. +
T Consensus 90 ~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~-~~-~---- 161 (424)
T 2iya_A 90 FLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTA-DR-G---- 161 (424)
T ss_dssp HHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC---------
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccc-cc-c----
Confidence 4343334445555555433 89999999988889999999999999998765311100000000000000 00 0
Q ss_pred CCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhc----------ccCCceEEEcchhHhhHHHHHHHhcC-CCeeeecc
Q 012645 162 LPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS----------LNKNDWVLCNSFEELEKELLRAMLGL-WPLVMIGP 230 (459)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~vgp 230 (459)
.+..++....+...+...........+.+.+.... ....+..++++.++++++. ... ++++++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~~~~~~~vGp 237 (424)
T 2iya_A 162 EEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG----DTVGDNYTFVGP 237 (424)
T ss_dssp ------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----GGCCTTEEECCC
T ss_pred cccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----cCCCCCEEEeCC
Confidence 00000000000000000000000011111111111 1145678888888887632 222 35899999
Q ss_pred cCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 012645 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENEN 310 (459)
Q Consensus 231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~ 310 (459)
++... ++..+|++..+++++|||++||......+.+..++++++..+.+++|+++...
T Consensus 238 ~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~- 295 (424)
T 2iya_A 238 TYGDR---------------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFV- 295 (424)
T ss_dssp CCCCC---------------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTS-
T ss_pred CCCCc---------------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcC-
Confidence 76431 01235666556678999999999866678888999999988889988876531
Q ss_pred CCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEee
Q 012645 311 KLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAK 390 (459)
Q Consensus 311 ~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~ 390 (459)
..+.+ ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++. |+|..+.
T Consensus 296 -~~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~ 370 (424)
T 2iya_A 296 -DPADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRHIP 370 (424)
T ss_dssp -CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECC
T ss_pred -ChHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC-CCEEEcC
Confidence 11222 135689999999999999988887 999999999999999999999999999999999999999 9999998
Q ss_pred ecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 391 KNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 391 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
.. .++++.|.++|+++|+|+ +++++++++++++++ .++ ...+.+.|+++..
T Consensus 371 ~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~~ 421 (424)
T 2iya_A 371 RD---QVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE----AGG-ARAAADILEGILA 421 (424)
T ss_dssp GG---GCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCH-HHHHHHHHHHHHH
T ss_pred cC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCc-HHHHHHHHHHHHh
Confidence 76 799999999999999998 999999999999875 233 4445555555544
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=9.7e-46 Score=364.11 Aligned_cols=363 Identities=15% Similarity=0.141 Sum_probs=234.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCC---------CC----C
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGG---------FK----Q 71 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~~----~ 71 (459)
-+.|||||+++|+.||++|+++||++|++|||+|+|++++.+.+.. ..|+.+.++........ .. .
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-EAGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSE 98 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-TTTCEEEESSTTCCSHHHHSCCC----------
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-hcCCeeEecCCchhHhhhccccccccccccchh
Confidence 3579999999999999999999999999999999999999887754 45888888753322110 00 0
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCC
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTL 151 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 151 (459)
..........+.......+..+.+.++.. +||+||+|.+++++..+|+.+|||++.+...+......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~----------- 165 (400)
T 4amg_A 99 GLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG----------- 165 (400)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH-----------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccc-----------
Confidence 01111122222222233334444433333 89999999999999999999999999876543110000
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCce-EEEcchhHhhHHHHHHHhcCCCeeeecc
Q 012645 152 PVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDW-VLCNSFEELEKELLRAMLGLWPLVMIGP 230 (459)
Q Consensus 152 p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~vgp 230 (459)
...... ..+.....+.......... ............ .......+..+..++
T Consensus 166 ---------------------~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 218 (400)
T 4amg_A 166 ---------------------LGALIR-----RAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL-LPEDRRSPGAWPMRY 218 (400)
T ss_dssp ---------------------HHHHHH-----HHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT-SCGGGCCTTCEECCC
T ss_pred ---------------------hhhHHH-----HHHHHHHHHhCCCcccccchhhcccCchhhcc-CcccccCCcccCccc
Confidence 000000 0001111111111111111 122221111100 000000011222221
Q ss_pred cCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCC--HHHHHHHHHHHHhCCCcEEEEEeCC
Q 012645 231 LVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIA--ANQVDEIARGLKASEKPFLWVVKEN 308 (459)
Q Consensus 231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~--~~~~~~i~~a~~~~~~~~v~~~~~~ 308 (459)
.... ....+.+|++..+++++|||||||+.... .+.+..++++++..+.+++|..+..
T Consensus 219 ~~~~--------------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~ 278 (400)
T 4amg_A 219 VPYN--------------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGG 278 (400)
T ss_dssp CCCC--------------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTT
T ss_pred cccc--------------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCc
Confidence 1111 12224568888888999999999986533 3567889999999999999988765
Q ss_pred C-CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceE
Q 012645 309 E-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGV 387 (459)
Q Consensus 309 ~-~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~ 387 (459)
. ... ...++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.||+++++. |+|+
T Consensus 279 ~~~~~-----~~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G~g~ 350 (400)
T 4amg_A 279 DLALL-----GELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-GIGF 350 (400)
T ss_dssp CCCCC-----CCCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH-TSEE
T ss_pred ccccc-----ccCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC-CCEE
Confidence 3 211 135789999999999999988777 999999999999999999999999999999999999999 9999
Q ss_pred EeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 388 RAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 388 ~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
.++.. +.++ ++|+++|+|+ +||+||+++++++++. . +-..+.+.++.|.
T Consensus 351 ~l~~~---~~~~----~al~~lL~d~---~~r~~a~~l~~~~~~~----~-~~~~~a~~le~lA 399 (400)
T 4amg_A 351 DAEAG---SLGA----EQCRRLLDDA---GLREAALRVRQEMSEM----P-PPAETAAXLVALA 399 (400)
T ss_dssp ECCTT---TCSH----HHHHHHHHCH---HHHHHHHHHHHHHHTS----C-CHHHHHHHHHHHC
T ss_pred EcCCC---CchH----HHHHHHHcCH---HHHHHHHHHHHHHHcC----C-CHHHHHHHHHHhh
Confidence 99876 6765 4677899999 9999999999999862 2 3445556666653
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.2e-43 Score=347.68 Aligned_cols=378 Identities=16% Similarity=0.162 Sum_probs=252.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhch
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGS 87 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (459)
|||+|+++|+.||++|+++||++|+++||+|+|++++.+.+.+...|++|++++.................+ .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~ 77 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQRAKPLTAEDV---RRFTT 77 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC-------CCSCCCHHHH---HHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHcCCeeeeCCCCHHHHhhcccccchHHH---HHHHH
Confidence 799999999999999999999999999999999999998877777899999998553211101011111111 11112
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCC-Cchh--HHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCC
Q 012645 88 RTLAEVILKYKDSESPVNCIVYDS-LLTW--ALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPG 164 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi~D~-~~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~ 164 (459)
..+..+++++.....+||+||+|. +..+ +..+|+++|||++.+++++.... .. .+|.
T Consensus 78 ~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-------~~-------------~~p~ 137 (415)
T 1iir_A 78 EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-------SP-------------YYPP 137 (415)
T ss_dssp HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-------CS-------------SSCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-------Cc-------------ccCC
Confidence 222333333332124899999997 6677 88999999999999987763210 00 0111
Q ss_pred CCCCCCCCCCc--cccCCC---CChH----HHHHHHHHhhc--ccC---------CceEEEcchhHhhHHHHHHHhcCCC
Q 012645 165 LPSLASSDLPS--FLAQPA---SNPA----YLAAILEQFGS--LNK---------NDWVLCNSFEELEKELLRAMLGLWP 224 (459)
Q Consensus 165 ~~~~~~~~~~~--~~~~~~---~~~~----~~~~~~~~~~~--~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (459)
.. .+. ..+. ..++.. .... +...+.+.... +.. ....++++.+++++. .....+
T Consensus 138 ~~-~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l~~~----~~~~~~ 211 (415)
T 1iir_A 138 PP-LGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAPL----QPTDLD 211 (415)
T ss_dssp CC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC----CCCSSC
T ss_pred cc-CCc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEeeChhhcCC----CcccCC
Confidence 00 000 0000 000000 0000 00000011100 111 014567777766531 011116
Q ss_pred eeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 012645 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWV 304 (459)
Q Consensus 225 ~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~ 304 (459)
++++||+.... . .+.++++.+|++.+ +++|||++||+. ........++++++..+.+++|+
T Consensus 212 ~~~vG~~~~~~---------------~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~ 272 (415)
T 1iir_A 212 AVQTGAWILPD---------------E-RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILS 272 (415)
T ss_dssp CEECCCCCCCC---------------C-CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEEC
T ss_pred eEeeCCCccCc---------------c-cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEE
Confidence 88899876541 0 12466789999865 359999999987 56778888999999999999998
Q ss_pred EeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 305 VKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
++...... ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||..||+++++. |
T Consensus 273 ~g~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g 344 (415)
T 1iir_A 273 RGWADLVL-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-G 344 (415)
T ss_dssp TTCTTCCC-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-T
T ss_pred eCCCcccc-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-C
Confidence 76542111 124578999999999999955555 999999999999999999999999999999999999999 9
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
+|..+... .++++.|.++|+++ +|+ +++++++++++++++ ..+...+.+.++++.++
T Consensus 345 ~g~~~~~~---~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 345 VGVAHDGP---IPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp SEEECSSS---SCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHTC
T ss_pred CcccCCcC---CCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHhc
Confidence 99999876 79999999999999 988 999999999998753 33345555666665543
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.6e-41 Score=335.63 Aligned_cols=377 Identities=16% Similarity=0.207 Sum_probs=259.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC---CCCCHHHHHHH-
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK---QAPSVKAYLES- 81 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~- 81 (459)
++|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++..|+.+..++..++..... ........+..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRPHLM 98 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHHHHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccccccccccchhhccccHHHHHHHH
Confidence 45899999999999999999999999999999999999999988888999999998654432100 00011111222
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeC-CCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYD-SLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D-~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
+.......+..+.+.+++. +||+||+| ...+++..+|+++|||++.+.+...... . .+.
T Consensus 99 ~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~---------~--~~~------- 158 (415)
T 3rsc_A 99 YLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE---------H--YSF------- 158 (415)
T ss_dssp HHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS---------S--CCH-------
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC---------c--ccc-------
Confidence 3333334455555555544 89999999 7778899999999999999875431000 0 000
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcc----------cC-CceEEEcchhHhhHHHHHHHhcC-CCeeee
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSL----------NK-NDWVLCNSFEELEKELLRAMLGL-WPLVMI 228 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~l~~~~~~~~~~~-~~~~~v 228 (459)
.+.+........+. ........+.+....+ .. .+..++...++++.+. ... .++.++
T Consensus 159 -~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~v 227 (415)
T 3rsc_A 159 -SQDMVTLAGTIDPL------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAG----DTFDDRFVFV 227 (415)
T ss_dssp -HHHHHHHHTCCCGG------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTG----GGCCTTEEEC
T ss_pred -ccccccccccCChh------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCc----ccCCCceEEe
Confidence 00000000000000 0111111222211111 01 1445555544444311 111 247888
Q ss_pred cccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 012645 229 GPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKEN 308 (459)
Q Consensus 229 gp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~ 308 (459)
||++... .+..+|....+++++|||++||......+.+..+++++...+.+++|.++..
T Consensus 228 Gp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 286 (415)
T 3rsc_A 228 GPCFDDR---------------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQ 286 (415)
T ss_dssp CCCCCCC---------------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTT
T ss_pred CCCCCCc---------------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 8876541 1133454444567899999999987777888999999999888888887643
Q ss_pred CCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEE
Q 012645 309 ENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR 388 (459)
Q Consensus 309 ~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~ 388 (459)
. ..+.+ ...++|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||.++++. |+|..
T Consensus 287 ~--~~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~ 360 (415)
T 3rsc_A 287 V--DPAAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAV 360 (415)
T ss_dssp S--CGGGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEE
T ss_pred C--ChHHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEE
Confidence 1 11222 135689999999999999988777 999999999999999999999999999999999999999 99999
Q ss_pred eeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 389 AKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 389 ~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
+... +++++.|.++|.++++|+ +++++++++++.+.+ .++ .+.+.+.++++.
T Consensus 361 ~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 412 (415)
T 3rsc_A 361 LPGE---KADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGG-AARAADAVEAYL 412 (415)
T ss_dssp CCGG---GCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCH-HHHHHHHHHHHH
T ss_pred cccC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCH-HHHHHHHHHHHh
Confidence 9887 799999999999999998 999999999999876 244 344444444443
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=7.8e-41 Score=329.24 Aligned_cols=375 Identities=17% Similarity=0.213 Sum_probs=260.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCC---CCCCCHHHHHHH-
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGF---KQAPSVKAYLES- 81 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~- 81 (459)
..|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++..|+.+..++..++.... ....+....+..
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLV 82 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHcCCEEEecccccccccccccccccchHHHHHHH
Confidence 3369999999999999999999999999999999999998888888889999999754332211 112233444443
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeC-CCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYD-SLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D-~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
+.......+..+.+.+++. +||+||+| .+..++..+|+++|||++.+.+.......
T Consensus 83 ~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~--------------------- 139 (402)
T 3ia7_A 83 YVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH--------------------- 139 (402)
T ss_dssp HHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT---------------------
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc---------------------
Confidence 4444444556666666554 99999999 77788999999999999998643310000
Q ss_pred cCC--CCCCCCCCCCCccccCCCCChHHHHHHHHHhhcc----------cC-CceEEEcchhHhhHHHHHHHhcC-CCee
Q 012645 161 TLP--GLPSLASSDLPSFLAQPASNPAYLAAILEQFGSL----------NK-NDWVLCNSFEELEKELLRAMLGL-WPLV 226 (459)
Q Consensus 161 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~l~~~~~~~~~~~-~~~~ 226 (459)
+.+ .+........+. ........+.+....+ .. .+..++...++++... ... .++.
T Consensus 140 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~ 209 (402)
T 3ia7_A 140 YSLFKELWKSNGQRHPA------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFA----ETFDERFA 209 (402)
T ss_dssp BCHHHHHHHHHTCCCGG------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTG----GGCCTTEE
T ss_pred ccccccccccccccChh------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCcc----ccCCCCeE
Confidence 000 000000000000 0111111222211111 01 1444555544444311 111 2488
Q ss_pred eecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 012645 227 MIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVK 306 (459)
Q Consensus 227 ~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~ 306 (459)
++||+.... .+...|....+++++||+++||......+.+..+++++...+.+++|.++
T Consensus 210 ~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 268 (402)
T 3ia7_A 210 FVGPTLTGR---------------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIG 268 (402)
T ss_dssp ECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECC
T ss_pred EeCCCCCCc---------------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeC
Confidence 899876541 11233444445678999999999877778899999999998888888876
Q ss_pred CCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeecccc-ccchhhHHHHHHHhhhc
Q 012645 307 ENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQ-FSDQPTNAKFVEEVWEV 385 (459)
Q Consensus 307 ~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~-~~DQ~~na~rv~~~~G~ 385 (459)
... ..+.+. ..++|+++.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|. ..||+.||.++++. |+
T Consensus 269 ~~~--~~~~~~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~ 342 (402)
T 3ia7_A 269 GFL--DPAVLG-PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GL 342 (402)
T ss_dssp TTS--CGGGGC-SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TS
T ss_pred CcC--ChhhhC-CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CC
Confidence 531 112221 35789999999999999988777 9999999999999999999999999 99999999999999 99
Q ss_pred eEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 386 GVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 386 G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
|..+... +++++.|.+++.++|+|+ +++++++++++++.+ .++ ...+.+.++++.
T Consensus 343 g~~~~~~---~~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 397 (402)
T 3ia7_A 343 GSVLRPD---QLEPASIREAVERLAADS---AVRERVRRMQRDILS----SGG-PARAADEVEAYL 397 (402)
T ss_dssp EEECCGG---GCSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCH-HHHHHHHHHHHH
T ss_pred EEEccCC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CCh-HHHHHHHHHHHH
Confidence 9999887 789999999999999998 999999999998865 344 444444444444
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.3e-42 Score=343.38 Aligned_cols=379 Identities=15% Similarity=0.103 Sum_probs=255.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC-CCCCHHHHHHHHHHhc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK-QAPSVKAYLESFKTVG 86 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (459)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++..|++|++++......... ........+. ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 77 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQ---RLA 77 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHH---HHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCeeeecCCCHHHHHhhccccchhHHHH---HHH
Confidence 799999999999999999999999999999999999988877877899999998543211100 0111111111 111
Q ss_pred hHHHHHHHHHhhcCCCCccEEEeCC-Cchh--HHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCC
Q 012645 87 SRTLAEVILKYKDSESPVNCIVYDS-LLTW--ALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLP 163 (459)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~Dlvi~D~-~~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p 163 (459)
...+..+++.+.....+||+||+|. +.++ +..+|+.+|||++.+.+++.... .. .+|
T Consensus 78 ~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------------~~------~~p 137 (416)
T 1rrv_A 78 AMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------------SP------HLP 137 (416)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------------CS------SSC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC--------------Cc------ccC
Confidence 1222334444431124899999996 4566 78899999999999887652110 00 011
Q ss_pred -CCC-CCCCCCCCccccCCCCC----hHHHHHHHHHhhc--cc----------CCceEEEcchhHhhHHHHHHHhcCCCe
Q 012645 164 -GLP-SLASSDLPSFLAQPASN----PAYLAAILEQFGS--LN----------KNDWVLCNSFEELEKELLRAMLGLWPL 225 (459)
Q Consensus 164 -~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~ 225 (459)
.++ ++............... ........+.... +. .. ..++++.++++++. +. .++
T Consensus 138 ~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~----~~-~~~ 211 (416)
T 1rrv_A 138 PAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ----PD-VDA 211 (416)
T ss_dssp CCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC----SS-CCC
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC----CC-CCe
Confidence 000 00000000000000000 0000001111100 11 12 46777777776421 11 268
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEE
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWV 304 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~ 304 (459)
+++||+..+. . .+.++++.+|++.+ +++|||++||... .....+..++++++..+.+++|+
T Consensus 212 ~~vG~~~~~~---------------~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~ 273 (416)
T 1rrv_A 212 VQTGAWLLSD---------------E-RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILS 273 (416)
T ss_dssp EECCCCCCCC---------------C-CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eeECCCccCc---------------c-CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEE
Confidence 8999887541 0 12366788999765 3699999999864 44567888999999999999998
Q ss_pred EeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 305 VKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
++...... ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++. |
T Consensus 274 ~g~~~~~~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g 345 (416)
T 1rrv_A 274 RGWTELVL-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-G 345 (416)
T ss_dssp CTTTTCCC-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-T
T ss_pred eCCccccc-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-C
Confidence 87542111 235689999999999999966666 999999999999999999999999999999999999999 9
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
+|..+... ..+++.|.++|+++ +|+ +|+++++++++++++ .+++ .+++.+++++.++
T Consensus 346 ~g~~~~~~---~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~----~~~~-~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 346 IGVAHDGP---TPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT----DGAA-AAADLVLAAVGRE 402 (416)
T ss_dssp SEEECSSS---CCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC----CHHH-HHHHHHHHHHHC-
T ss_pred CccCCCCC---CCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh----cCcH-HHHHHHHHHHhcc
Confidence 99998876 79999999999999 998 999999999988764 2333 4444332666543
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.1e-41 Score=333.21 Aligned_cols=367 Identities=17% Similarity=0.173 Sum_probs=245.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhch
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGS 87 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (459)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.++..|+.|.+++....................+.....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVA 80 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999998899999999854331110000010011111222222
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCchhH---HHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcccCCC
Q 012645 88 RTLAEVILKYKDSESPVNCIVYDSLLTWA---LDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLTLPG 164 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~---~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~ 164 (459)
..++.+.+.+ .+||+||+|....++ ..+|+++|||++.+..++.... .+.
T Consensus 81 ~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~-----------------------~~~ 133 (404)
T 3h4t_A 81 EWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLP-----------------------SEQ 133 (404)
T ss_dssp HHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSG-----------------------GGS
T ss_pred HHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCC-----------------------Chh
Confidence 3333333322 279999998665444 7889999999999887763110 000
Q ss_pred CCCCCCCCCCccccCCCCChHHHHHHHHHhhc--ccC---------CceEEEcchhHhhHHHHHHHhcCCCeeeecccCC
Q 012645 165 LPSLASSDLPSFLAQPASNPAYLAAILEQFGS--LNK---------NDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP 233 (459)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~ 233 (459)
. ........ ...+..+.+.+.+.... +.. .+..+.+..+.+.+. .+...++.++|++..
T Consensus 134 ---~--~~~~~~~~-~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~----~~~~~~~~~~G~~~~ 203 (404)
T 3h4t_A 134 ---S--QAERDMYN-QGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL----RPTDLGTVQTGAWIL 203 (404)
T ss_dssp ---C--HHHHHHHH-HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC----CTTCCSCCBCCCCCC
T ss_pred ---H--HHHHHHHH-HHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC----CCCCCCeEEeCcccc
Confidence 0 00000000 00000011111111100 100 011122222222110 000123556665543
Q ss_pred CccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCC
Q 012645 234 SAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKL 312 (459)
Q Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~ 312 (459)
+. ..+.++++.+|++. ++++|||++||+.. ..+.+..++++++..+.++||+.+... ...
T Consensus 204 ~~----------------~~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~ 264 (404)
T 3h4t_A 204 PD----------------QRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGRI 264 (404)
T ss_dssp CC----------------CCCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCCS
T ss_pred CC----------------CCCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccccc
Confidence 21 12457788999985 35699999999987 667888999999999999999887543 111
Q ss_pred chhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeec
Q 012645 313 PVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKN 392 (459)
Q Consensus 313 ~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~ 392 (459)
..++|+++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|+..||+.||.++++. |+|..+...
T Consensus 265 ------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~~ 335 (404)
T 3h4t_A 265 ------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGP 335 (404)
T ss_dssp ------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSS
T ss_pred ------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCcC
Confidence 24689999999999999976666 999999999999999999999999999999999999999 999999877
Q ss_pred CCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 012645 393 RAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 393 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~ 452 (459)
+++++.|.++|+++++ + +|+++++++++.+.+ . +.+.+.+.|+++.+
T Consensus 336 ---~~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~~-----~-~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 336 ---TPTVESLSAALATALT-P---GIRARAAAVAGTIRT-----D-GTTVAAKLLLEAIS 382 (404)
T ss_dssp ---SCCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCCC-----C-HHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHhh-----h-HHHHHHHHHHHHHh
Confidence 7899999999999999 8 999999999997752 2 33444445555443
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2.1e-40 Score=330.13 Aligned_cols=375 Identities=13% Similarity=0.140 Sum_probs=244.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCC-CC--------------C
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE-GG--------------F 69 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~--------------~ 69 (459)
...|||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.++..|++|++++...+. .. .
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSL 97 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTTTCCEEECSCCCCHHHHHHHTTHHHHHHHTTC
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhCCCceeecCCccchHHHhhhhhcccccccccc
Confidence 45589999999999999999999999999999999999999888888899999999854310 00 0
Q ss_pred C-----CC-CCHH---HHHHHHHHh----c-hH-HHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccch
Q 012645 70 K-----QA-PSVK---AYLESFKTV----G-SR-TLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 70 ~-----~~-~~~~---~~~~~~~~~----~-~~-~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~ 134 (459)
. .. .... .....+... . .. .+.++++.+++. +||+||+|.++.++..+|+.+|||++.+...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~ 175 (441)
T 2yjn_A 98 DFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTGTPHARLLWGP 175 (441)
T ss_dssp CCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHTCCEEEECSSC
T ss_pred cccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcCCCEEEEecCC
Confidence 0 00 0111 111112111 0 12 444554444333 89999999988889999999999999997654
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhccc---------CCceEEE
Q 012645 135 ASVCSMYWQINHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLN---------KNDWVLC 205 (459)
Q Consensus 135 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 205 (459)
............... ..|. . .......+.+.+....+. ..+..+.
T Consensus 176 ~~~~~~~~~~~~~~~-----------~~~~---~------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 229 (441)
T 2yjn_A 176 DITTRARQNFLGLLP-----------DQPE---E------------HREDPLAEWLTWTLEKYGGPAFDEEVVVGQWTID 229 (441)
T ss_dssp CHHHHHHHHHHHHGG-----------GSCT---T------------TCCCHHHHHHHHHHHHTTCCCCCGGGTSCSSEEE
T ss_pred Ccchhhhhhhhhhcc-----------cccc---c------------cccchHHHHHHHHHHHcCCCCCCccccCCCeEEE
Confidence 321111100000000 0110 0 000111122222221111 1223333
Q ss_pred cchhHhhHHHHHHHhcCCCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC---
Q 012645 206 NSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI--- 282 (459)
Q Consensus 206 ~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--- 282 (459)
+..+.++. +.+.+ -..+++.. +. .+.++.+|++..+++++|||++||+...
T Consensus 230 ~~~~~~~~-----~~~~~-~~~~~~~~-------------------~~-~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~ 283 (441)
T 2yjn_A 230 PAPAAIRL-----DTGLK-TVGMRYVD-------------------YN-GPSVVPEWLHDEPERRRVCLTLGISSRENSI 283 (441)
T ss_dssp CSCGGGSC-----CCCCC-EEECCCCC-------------------CC-SSCCCCGGGSSCCSSCEEEEEC---------
T ss_pred ecCccccC-----CCCCC-CCceeeeC-------------------CC-CCcccchHhhcCCCCCEEEEECCCCcccccC
Confidence 33332221 00000 01111110 00 1233667887666778999999998753
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCC
Q 012645 283 AANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGV 361 (459)
Q Consensus 283 ~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~Gv 361 (459)
..+.+..+++++...+.++||+.+... ..+. ..++|+++.+|+||.++|+++++ ||||||+||++||+++||
T Consensus 284 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~ 356 (441)
T 2yjn_A 284 GQVSIEELLGAVGDVDAEIIATFDAQQLEGVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGV 356 (441)
T ss_dssp -CCSTTTTHHHHHTSSSEEEECCCTTTTSSCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEECCcchhhhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCC
Confidence 335677788999988999999887532 2221 24689999999999999966666 999999999999999999
Q ss_pred eeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHH
Q 012645 362 AVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDK 441 (459)
Q Consensus 362 P~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~ 441 (459)
|+|++|...||+.||.++++. |+|..+... +++++.|.++|.++++|+ +++++++++++++.+ ..+.+
T Consensus 357 P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~-----~~~~~ 424 (441)
T 2yjn_A 357 PQVILPDGWDTGVRAQRTQEF-GAGIALPVP---ELTPDQLRESVKRVLDDP---AHRAGAARMRDDMLA-----EPSPA 424 (441)
T ss_dssp CEEECCCSHHHHHHHHHHHHH-TSEEECCTT---TCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT-----SCCHH
T ss_pred CEEEeCCcccHHHHHHHHHHc-CCEEEcccc---cCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHc-----CCCHH
Confidence 999999999999999999999 999999876 799999999999999998 999999999998875 33345
Q ss_pred HHHHHHHHHHH
Q 012645 442 NIDEFVVRLLK 452 (459)
Q Consensus 442 ~~~~~~~~l~~ 452 (459)
.+.+.|+++..
T Consensus 425 ~~~~~i~~~~~ 435 (441)
T 2yjn_A 425 EVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555554
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.8e-39 Score=322.42 Aligned_cols=367 Identities=18% Similarity=0.210 Sum_probs=247.6
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCC---CCCCHHH
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFK---QAPSVKA 77 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~ 77 (459)
|...|+.|||+|++.++.||++|++.||++|+++||+|++++++...+.+...|+.+++++..++..... ...+...
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLD 80 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTTSCGGGGCSSHHH
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCccccccccccchhhHH
Confidence 5555667899999999999999999999999999999999999988777778899999998654322111 0123333
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCC
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQET 157 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 157 (459)
.+..+.......+..+.+.+++. +||+||+|.+.+++..+|+++|||++.+.+.+..............
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~--------- 149 (430)
T 2iyf_A 81 NVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPM--------- 149 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccch---------
Confidence 33333332233444455545444 8999999988778999999999999998865420000000000000
Q ss_pred CcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhc----------ccCCceEEEcchhHhhHHHHHHHhcC-CC-e
Q 012645 158 VPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS----------LNKNDWVLCNSFEELEKELLRAMLGL-WP-L 225 (459)
Q Consensus 158 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~ 225 (459)
.... . ..+.. ......+.+.... ....+.+++++.++++... ... .+ +
T Consensus 150 ----~~~~--~---~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~v 209 (430)
T 2iyf_A 150 ----WREP--R---QTERG-------RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----DRVDEDVY 209 (430)
T ss_dssp ----HHHH--H---HSHHH-------HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----GGSCTTTE
T ss_pred ----hhhh--c---cchHH-------HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----ccCCCccE
Confidence 0000 0 00000 0000111111111 1135678888887776531 111 25 8
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-CCcEEEE
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS-EKPFLWV 304 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-~~~~v~~ 304 (459)
+++||.++.. .+..+|....+++++||+++||......+.+..++++++.. +.+++|+
T Consensus 210 ~~vG~~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~ 268 (430)
T 2iyf_A 210 TFVGACQGDR---------------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQ 268 (430)
T ss_dssp EECCCCC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEeCCcCCCC---------------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEE
Confidence 8999865431 00123444345677999999999855667888899999885 7888887
Q ss_pred EeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 305 VKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
++... ..+.+ +..++|+++.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||..||.++++. |
T Consensus 269 ~G~~~--~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g 342 (430)
T 2iyf_A 269 IGRKV--TPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-G 342 (430)
T ss_dssp CC-----CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-T
T ss_pred eCCCC--ChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-C
Confidence 76532 11222 135689999999999999988887 999999999999999999999999999999999999999 9
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKK 431 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 431 (459)
+|..+... .++++.|.++|.++++|+ ++++++.++++.+.+
T Consensus 343 ~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 343 VARKLATE---EATADLLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp SEEECCCC----CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred CEEEcCCC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 99998876 789999999999999998 899999999988875
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=6.1e-39 Score=313.86 Aligned_cols=356 Identities=13% Similarity=0.099 Sum_probs=247.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCC-------CC--C-CC-CHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGG-------FK--Q-AP-SVK 76 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~--~-~~-~~~ 76 (459)
|||++++.++.||++|+++||++|+++||+|++++++.+.+.++..|+.++.++....... .. . .. ...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVAQ 80 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhCCCEEEEeCCcchHHHHhhhcccCccccCcchHHH
Confidence 7999999999999999999999999999999999998877777778999999875320000 00 0 10 111
Q ss_pred HHH-HH-HHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCC
Q 012645 77 AYL-ES-FKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVN 154 (459)
Q Consensus 77 ~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (459)
..+ .. +.......+..+.+.+++. +||+||+|.+..++..+|+.+|||++.+...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~------------------- 139 (384)
T 2p6p_A 81 ARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV------------------- 139 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC-------------------
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCc-------------------
Confidence 111 11 1112222333343333333 899999998878888999999999998764320
Q ss_pred CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhc--cc---CCceEEEcchhHhhHHHHHHHhcCC--Ceee
Q 012645 155 QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS--LN---KNDWVLCNSFEELEKELLRAMLGLW--PLVM 227 (459)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~ 227 (459)
.+ ... .......+.+.... +. ..+.+++++.+.++.+. ..+ ++.+
T Consensus 140 -------~~-------~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~ 191 (384)
T 2p6p_A 140 -------DA-------DGI---------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN-----AAPARMMRH 191 (384)
T ss_dssp -------CC-------TTT---------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-----SCCCEECCC
T ss_pred -------cc-------chh---------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-----CCCCCceEe
Confidence 00 000 00011111111111 11 14567777776655311 110 1112
Q ss_pred ecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC-----CHHHHHHHHHHHHhCCCcEE
Q 012645 228 IGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI-----AANQVDEIARGLKASEKPFL 302 (459)
Q Consensus 228 vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~-----~~~~~~~i~~a~~~~~~~~v 302 (459)
++ . . .+.++.+|++..+++++|||++||.... ..+.+..+++++...+.+++
T Consensus 192 ~~-~--~--------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 248 (384)
T 2p6p_A 192 VA-T--S--------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELI 248 (384)
T ss_dssp CC-C--C--------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEE
T ss_pred cC-C--C--------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEE
Confidence 11 0 0 0123556887655667999999998764 45678889999999999999
Q ss_pred EEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHh
Q 012645 303 WVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEV 382 (459)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~ 382 (459)
|+.+.. ..+.+. ..++|+++ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||.++++.
T Consensus 249 ~~~g~~---~~~~l~-~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~ 321 (384)
T 2p6p_A 249 VAAPDT---VAEALR-AEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY 321 (384)
T ss_dssp EECCHH---HHHHHH-HHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH
T ss_pred EEeCCC---CHHhhC-CCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC
Confidence 987531 111121 35789999 99999999977666 999999999999999999999999999999999999999
Q ss_pred hhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Q 012645 383 WEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKAD 454 (459)
Q Consensus 383 ~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~~ 454 (459)
|+|..+... ..+++.|.++|+++|+|+ +++++++++++++++ ..+.+.+.+.|+.+..+.
T Consensus 322 -g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~ 381 (384)
T 2p6p_A 322 -GAAIALLPG---EDSTEAIADSCQELQAKD---TYARRAQDLSREISG-----MPLPATVVTALEQLAHHH 381 (384)
T ss_dssp -TSEEECCTT---CCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHHHHH
T ss_pred -CCeEecCcC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHhhhc
Confidence 999998876 789999999999999998 999999999999986 333455555566665443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=4e-38 Score=309.58 Aligned_cols=345 Identities=14% Similarity=0.144 Sum_probs=223.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCC---------C-CCCCCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE---------G-GFKQAPS 74 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~---------~-~~~~~~~ 74 (459)
..+|||+|++.++.||++|+++||++|+++||+|++++++.+.+.++..|+.++.++..... . .......
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTMPRE 92 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCCCSS
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCcccccccc
Confidence 45799999999999999999999999999999999999998888888889999998632110 0 0000011
Q ss_pred HHH----HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCC
Q 012645 75 VKA----YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLT 150 (459)
Q Consensus 75 ~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 150 (459)
... ....+.......+..+.+.+++. +||+|++|...+++..+|+.+|||++.+.........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~----------- 159 (398)
T 4fzr_A 93 EKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL----------- 159 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH-----------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchh-----------
Confidence 111 11122222223333343333333 8999999988888999999999999987654310000
Q ss_pred CCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcc-----cCCceEEEcchhHhhHHHHHHHhcCCCe
Q 012645 151 LPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSL-----NKNDWVLCNSFEELEKELLRAMLGLWPL 225 (459)
Q Consensus 151 ~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 225 (459)
+ .......+.+....+ ...+..+......+.... . ...
T Consensus 160 -------------------------~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~ 202 (398)
T 4fzr_A 160 -------------------------I------KSAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-----K-PGT 202 (398)
T ss_dssp -------------------------H------HHHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC----------CCC
T ss_pred -------------------------h------hHHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-----C-CCC
Confidence 0 000111111111111 112333433333333210 0 001
Q ss_pred eeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC--------CHHHHHHHHHHHHhC
Q 012645 226 VMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI--------AANQVDEIARGLKAS 297 (459)
Q Consensus 226 ~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--------~~~~~~~i~~a~~~~ 297 (459)
..+... +. .....++..|+...+++++||+++||.... ....+..+++++...
T Consensus 203 ~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~ 263 (398)
T 4fzr_A 203 TKMRYV-PY------------------NGRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL 263 (398)
T ss_dssp EECCCC-CC------------------CCSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGG
T ss_pred CCeeee-CC------------------CCCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC
Confidence 111100 00 001223556776656778999999998643 345688899999999
Q ss_pred CCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHH
Q 012645 298 EKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAK 377 (459)
Q Consensus 298 ~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~ 377 (459)
+.+++|+.+... .+.+. ..++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||+.||.
T Consensus 264 ~~~~v~~~~~~~---~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~ 337 (398)
T 4fzr_A 264 GFEVVVAVSDKL---AQTLQ-PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSAR 337 (398)
T ss_dssp TCEEEECCCC------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHH
T ss_pred CCEEEEEeCCcc---hhhhc-cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHH
Confidence 999998876532 11111 35789999999999999988777 9999999999999999999999999999999999
Q ss_pred HHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Q 012645 378 FVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKK 431 (459)
Q Consensus 378 rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 431 (459)
++++. |+|..+... .++++.|.++|.++|+|+ ++++++++.++++.+
T Consensus 338 ~~~~~-g~g~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 338 LLHAA-GAGVEVPWE---QAGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHT-TSEEECC----------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred HHHHc-CCEEecCcc---cCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 99999 999999877 789999999999999999 999999999998865
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=8.9e-37 Score=299.93 Aligned_cols=355 Identities=14% Similarity=0.152 Sum_probs=239.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCC------------------
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDE------------------ 66 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------------ 66 (459)
.+.|||+|++.++.||++|+++||++|+++||+|+++++ .+.+.++..|+.++.++.....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNPRFAETV 96 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCHHHHHTG
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCCccccccc
Confidence 356999999999999999999999999999999999999 8888888899999999743110
Q ss_pred --CCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHh
Q 012645 67 --GGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQI 144 (459)
Q Consensus 67 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 144 (459)
............+..........+.++++++ +||+||+|...+++..+|+.+|||++.+.....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~--------- 162 (398)
T 3oti_A 97 ATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-----RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAW--------- 162 (398)
T ss_dssp GGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTC---------
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEECchhhHHHHHHHHcCCCEEEEeccCC---------
Confidence 0001111122222222223333445555554 899999998888899999999999998754320
Q ss_pred hccCCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCC
Q 012645 145 NHGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWP 224 (459)
Q Consensus 145 ~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (459)
.......... .. +.....+........+..+....+.+..+ .+ ..
T Consensus 163 ------------------------~~~~~~~~~~-~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~ 207 (398)
T 3oti_A 163 ------------------------RTRGMHRSIA-SF----LTDLMDKHQVSLPEPVATIESFPPSLLLE-----AE-PE 207 (398)
T ss_dssp ------------------------CCTTHHHHHH-TT----CHHHHHHTTCCCCCCSEEECSSCGGGGTT-----SC-CC
T ss_pred ------------------------CccchhhHHH-HH----HHHHHHHcCCCCCCCCeEEEeCCHHHCCC-----CC-CC
Confidence 0000000000 00 11111111111112233333333322210 00 00
Q ss_pred eeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccC--CHHHHHHHHHHHHhCCCcEE
Q 012645 225 LVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADI--AANQVDEIARGLKASEKPFL 302 (459)
Q Consensus 225 ~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--~~~~~~~i~~a~~~~~~~~v 302 (459)
...+... +. ..+..+..|+...+++++||+++||.... ..+.+..+++++...+.+++
T Consensus 208 ~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v 267 (398)
T 3oti_A 208 GWFMRWV-PY-------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFV 267 (398)
T ss_dssp SBCCCCC-CC-------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEE
T ss_pred CCCcccc-CC-------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEE
Confidence 0000000 00 01222445666556778999999998642 56778889999999999999
Q ss_pred EEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHH--HHHH
Q 012645 303 WVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNA--KFVE 380 (459)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na--~rv~ 380 (459)
|+.+... .+.+. ..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|| .+++
T Consensus 268 ~~~g~~~---~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~ 341 (398)
T 3oti_A 268 LALGDLD---ISPLG-TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVS 341 (398)
T ss_dssp EECTTSC---CGGGC-SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHH
T ss_pred EEECCcC---hhhhc-cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHH
Confidence 9877532 12221 35789999999999999988777 999999999999999999999999999999999 9999
Q ss_pred HhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 381 EVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 381 ~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
+. |+|..++.. +.+++.|. ++|+|+ +++++++++++++.+ ..+...+.+.++++.
T Consensus 342 ~~-g~g~~~~~~---~~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 342 RR-GIGLVSTSD---KVDADLLR----RLIGDE---SLRTAAREVREEMVA-----LPTPAETVRRIVERI 396 (398)
T ss_dssp HH-TSEEECCGG---GCCHHHHH----HHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHH
T ss_pred HC-CCEEeeCCC---CCCHHHHH----HHHcCH---HHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHh
Confidence 99 999999877 78887776 889998 999999999999875 334555555555553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2.1e-35 Score=289.49 Aligned_cols=355 Identities=12% Similarity=0.101 Sum_probs=235.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEc-CCCCC--CCCCC----C-----CCC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPI-SDGFD--EGGFK----Q-----APS 74 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~-~~~~~--~~~~~----~-----~~~ 74 (459)
+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+...|+.++.+ +.... ..... . ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQRD 80 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHBTCEEEEC--------------CCSCCGGGGCTT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhCCCceeeecCCccchhhhhhhccccccccccccc
Confidence 599999999999999999999999999999999999988887788889999988 42211 00000 0 000
Q ss_pred HHHHHHHHHHhchHH-------HHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhcc
Q 012645 75 VKAYLESFKTVGSRT-------LAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHG 147 (459)
Q Consensus 75 ~~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 147 (459)
.......+....... +..+.+.+++. +||+||+|...+++..+|+.+|||++.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~------------ 146 (391)
T 3tsa_A 81 TEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVD------------ 146 (391)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCC------------
T ss_pred chhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCc------------
Confidence 011111111111112 33333333333 899999998778888999999999999764331
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhccc-----CCceEEEcchhHhhHHHHHHHhcC
Q 012645 148 LLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLN-----KNDWVLCNSFEELEKELLRAMLGL 222 (459)
Q Consensus 148 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~ 222 (459)
.. .... .......+.+....+. ..+..+....++++.. .+.
T Consensus 147 --------------------~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 192 (391)
T 3tsa_A 147 --------------------PT----AGPF-----SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS-----DAP 192 (391)
T ss_dssp --------------------CT----TTHH-----HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-----TSC
T ss_pred --------------------cc----cccc-----cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-----CCC
Confidence 00 0000 0011111222211111 1133444333333210 000
Q ss_pred C--CeeeecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc--CC-HHHHHHHHHHHHhC
Q 012645 223 W--PLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD--IA-ANQVDEIARGLKAS 297 (459)
Q Consensus 223 ~--~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~--~~-~~~~~~i~~a~~~~ 297 (459)
. ++.++ |. .....+..|+...+++++|++++||... .. ...+..++++ ...
T Consensus 193 ~~~~~~~~-p~----------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~ 248 (391)
T 3tsa_A 193 QGAPVQYV-PY----------------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TEL 248 (391)
T ss_dssp CCEECCCC-CC----------------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS
T ss_pred ccCCeeee-cC----------------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccC
Confidence 0 01111 00 0012244566655677899999999853 33 6778888888 776
Q ss_pred -CCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHH
Q 012645 298 -EKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNA 376 (459)
Q Consensus 298 -~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na 376 (459)
+.+++|+.+... .+.+. ..++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.|+
T Consensus 249 p~~~~v~~~~~~~---~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a 322 (391)
T 3tsa_A 249 PGVEAVIAVPPEH---RALLT-DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYA 322 (391)
T ss_dssp TTEEEEEECCGGG---GGGCT-TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHH
T ss_pred CCeEEEEEECCcc---hhhcc-cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHH
Confidence 778888776432 11111 35689999999999999966666 999999999999999999999999999999999
Q ss_pred HHHHHhhhceEEeee--cCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 377 KFVEEVWEVGVRAKK--NRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 377 ~rv~~~~G~G~~~~~--~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
.++++. |+|..+.. . ..+++.|.+++.++|+|+ +++++++++++.+.+ ..+ ...+.+.++++.
T Consensus 323 ~~~~~~-g~g~~~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 387 (391)
T 3tsa_A 323 RNLAAA-GAGICLPDEQA---QSDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA----MPH-PAALVRTLENTA 387 (391)
T ss_dssp HHHHHT-TSEEECCSHHH---HTCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT----SCC-HHHHHHHHHHC-
T ss_pred HHHHHc-CCEEecCcccc---cCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc----CCC-HHHHHHHHHHHH
Confidence 999999 99999987 6 689999999999999999 999999999998865 344 444445555543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=9.9e-34 Score=279.49 Aligned_cols=360 Identities=13% Similarity=0.102 Sum_probs=244.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCC------------CCCC----
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGF------------DEGG---- 68 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~---- 68 (459)
..+|||+|++.++.||++|++.||++|+++||+|++++++.+.+.+...|+.++.++... ....
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGL 97 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTC
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhcCCceeecCcccccchhhhhhhhhcccCCccC
Confidence 467999999999999999999999999999999999999887777777899999987410 0000
Q ss_pred --CCCCCCHHHHHHHH-HHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhh
Q 012645 69 --FKQAPSVKAYLESF-KTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQIN 145 (459)
Q Consensus 69 --~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~ 145 (459)
..........+... .......+.+++++. +||+||+|....++..+|+.+|||+|.+......
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~--------- 163 (412)
T 3otg_A 98 TPEQLSELPQIVFGRVIPQRVFDELQPVIERL-----RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT--------- 163 (412)
T ss_dssp CHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC---------
T ss_pred ChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-----CCCEEEECchhhHHHHHHHHcCCCEEEecccccC---------
Confidence 00011111111111 111123344455544 8999999987777888999999999987553210
Q ss_pred ccCCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhc----------ccCCceEEEcchhHhhHHH
Q 012645 146 HGLLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGS----------LNKNDWVLCNSFEELEKEL 215 (459)
Q Consensus 146 ~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~ 215 (459)
. ... ...+.+.+.+.... ....+..+..+..+++...
T Consensus 164 ------------------------~---~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~ 210 (412)
T 3otg_A 164 ------------------------P---DDL------TRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPE 210 (412)
T ss_dssp ------------------------C---SHH------HHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHH
T ss_pred ------------------------c---hhh------hHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCc
Confidence 0 000 00111111111111 1223445555544444211
Q ss_pred HHHHhcCCCeeeecccCCCccccccccCCccCCCCCCCCChhhhhhh-hccCCCCcEEEEEeCCcccCCHHHHHHHHHHH
Q 012645 216 LRAMLGLWPLVMIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRW-LATKPEKSVIYVSFGSMADIAANQVDEIARGL 294 (459)
Q Consensus 216 ~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~ 294 (459)
.... .....+.+.... ...+...| ....+++++|++++||........+..+++++
T Consensus 211 ~~~~---~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l 267 (412)
T 3otg_A 211 FRAR---PRRHELRPVPFA--------------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGL 267 (412)
T ss_dssp HHTC---TTEEECCCCCCC--------------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHH
T ss_pred ccCC---CCcceeeccCCC--------------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHH
Confidence 1000 001111111000 01113345 23334667999999999766778888899999
Q ss_pred HhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhh
Q 012645 295 KASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPT 374 (459)
Q Consensus 295 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~ 374 (459)
...+.+++|+.+... ..+.+. ..++|+++.+|+|+.++|+++++ ||+|||.||++||+++|+|+|++|...||..
T Consensus 268 ~~~~~~~~~~~g~~~--~~~~l~-~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~ 342 (412)
T 3otg_A 268 AGLDADVLVASGPSL--DVSGLG-EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFA 342 (412)
T ss_dssp HTSSSEEEEECCSSC--CCTTCC-CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred HcCCCEEEEEECCCC--Chhhhc-cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHH
Confidence 988999999887642 112221 25689999999999999988887 9999999999999999999999999999999
Q ss_pred HHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 375 NAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 375 na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
|+..+++. |+|..+... .++++.|.++|.++++|+ ++++++.+.++++.+ ..+ .+.+.+.++++.
T Consensus 343 ~~~~v~~~-g~g~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~l~ 407 (412)
T 3otg_A 343 NAQAVAQA-GAGDHLLPD---NISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA----MPG-PDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHH-TSEEECCGG---GCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----SCC-HHHHHTTHHHHH
T ss_pred HHHHHHHc-CCEEecCcc---cCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc----CCC-HHHHHHHHHHHh
Confidence 99999999 999999987 789999999999999998 999999998888875 243 444444444443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=8.4e-30 Score=246.53 Aligned_cols=307 Identities=15% Similarity=0.103 Sum_probs=196.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc--cccCCCCceEEEcCCC-CCCCC-CCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV--KSIHATTVGVEPISDG-FDEGG-FKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~--~~~~~~g~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~ 83 (459)
.||+|.+.||.||++|.++||++|+++||+|+|++++... +.+.+.|+.++.++.. +.... ..........+..+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~- 81 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSL- 81 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHH-
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHH-
Confidence 4899999999999999999999999999999999987643 3466779999988732 21110 01111111211111
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCccc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPLT 161 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 161 (459)
.....++++. +||+||++..+. .+..+|+.+|||++......
T Consensus 82 ----~~~~~~l~~~-----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~--------------------------- 125 (365)
T 3s2u_A 82 ----FQALRVIRQL-----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA--------------------------- 125 (365)
T ss_dssp ----HHHHHHHHHH-----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS---------------------------
T ss_pred ----HHHHHHHHhc-----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch---------------------------
Confidence 1233455655 899999886553 35678999999999754322
Q ss_pred CCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCccccccc
Q 012645 162 LPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQI 241 (459)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~ 241 (459)
+||+ . .+... +.++.+.. .+++. .+...+..++|+.+....+..
T Consensus 126 ~~G~--------------------~----nr~l~--~~a~~v~~-~~~~~-------~~~~~k~~~~g~pvr~~~~~~-- 169 (365)
T 3s2u_A 126 VAGT--------------------A----NRSLA--PIARRVCE-AFPDT-------FPASDKRLTTGNPVRGELFLD-- 169 (365)
T ss_dssp SCCH--------------------H----HHHHG--GGCSEEEE-SSTTS-------SCC---CEECCCCCCGGGCCC--
T ss_pred hhhh--------------------H----HHhhc--cccceeee-ccccc-------ccCcCcEEEECCCCchhhccc--
Confidence 2321 0 11111 11222222 22211 111124666775544321100
Q ss_pred cCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC----CCcEEEEEeCCC-CCCchhh
Q 012645 242 AGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS----EKPFLWVVKENE-NKLPVEF 316 (459)
Q Consensus 242 ~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~----~~~~v~~~~~~~-~~~~~~~ 316 (459)
-.......+.++.|++..||.... ...+.+.+++..+ +..++++.+... +...+.
T Consensus 170 -----------------~~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~- 229 (365)
T 3s2u_A 170 -----------------AHARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAER- 229 (365)
T ss_dssp -----------------TTSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHH-
T ss_pred -----------------hhhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccccccccce-
Confidence 000111123556899988987642 2334456666653 344566655432 111111
Q ss_pred hhhcCCCceEEeeecHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccc----cchhhHHHHHHHhhhceEEeee
Q 012645 317 VNSVGETGLVVRWCNQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF----SDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 317 ~~~~~~~v~v~~~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~----~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
....+.++.+.+|+++. ++++.+|+ +|||+|.+|+.|++++|+|+|++|+. .+|..||+.+++. |+|..+..
T Consensus 230 ~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~ 306 (365)
T 3s2u_A 230 YRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQ 306 (365)
T ss_dssp HHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCT
T ss_pred ecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeec
Confidence 12356789999999986 89988888 99999999999999999999999963 5799999999999 99999988
Q ss_pred cCCCcccHHHHHHHHHHHhcCh
Q 012645 392 NRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 392 ~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. +++++.|.++|.++++|+
T Consensus 307 ~---~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 307 K---STGAAELAAQLSEVLMHP 325 (365)
T ss_dssp T---TCCHHHHHHHHHHHHHCT
T ss_pred C---CCCHHHHHHHHHHHHCCH
Confidence 7 899999999999999998
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.4e-27 Score=204.08 Aligned_cols=163 Identities=27% Similarity=0.483 Sum_probs=141.0
Q ss_pred CChhhhhhhhccCCCCcEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecH
Q 012645 254 PTGDQCMRWLATKPEKSVIYVSFGSMA-DIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQ 332 (459)
Q Consensus 254 ~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~ 332 (459)
++++++.+|++..+++++|||++||.. ......+..++++++..+.+++|+.+... ++ ..++|+++.+|+|+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~---~~----~~~~~v~~~~~~~~ 78 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK---PD----TLGLNTRLYKWIPQ 78 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC---CT----TCCTTEEEESSCCH
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC---cc----cCCCcEEEecCCCH
Confidence 467889999987767789999999986 35677888899999988899999886431 11 24678999999999
Q ss_pred HHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 333 FEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 333 ~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
.+++.|+.+++||||||+||++||+++|+|+|++|...||..||.++++. |+|..++.. +++++.|.++|.++++|
T Consensus 79 ~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 79 NDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFN---TMSSTDLLNALKRVIND 154 (170)
T ss_dssp HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTT---TCCHHHHHHHHHHHHHC
T ss_pred HHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccc---cCCHHHHHHHHHHHHcC
Confidence 99997777777999999999999999999999999999999999999999 999999876 78999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 012645 413 ERSQKIKRNVSKWREFAK 430 (459)
Q Consensus 413 ~~~~~~~~~a~~l~~~~~ 430 (459)
+ +|+++++++++.++
T Consensus 155 ~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 155 P---SYKENVMKLSRIQH 169 (170)
T ss_dssp H---HHHHHHHHHC----
T ss_pred H---HHHHHHHHHHHHhh
Confidence 8 99999999998875
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=1.4e-20 Score=182.12 Aligned_cols=301 Identities=13% Similarity=0.069 Sum_probs=190.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc--cccCCCCceEEEcCCC-CCCCCCCCCCCHHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV--KSIHATTVGVEPISDG-FDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~--~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 84 (459)
|||++++.+..||..+++.||++|+++||+|++++..... ..+...|+.++.++.. +.. ......+.....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~ 80 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRG------KGIKALIAAPLR 80 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTT------CCHHHHHTCHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCc------CccHHHHHHHHH
Confidence 8999999888899999999999999999999999986532 3345568888877632 111 111111111111
Q ss_pred h--chHHHHHHHHHhhcCCCCccEEEeCCCc--hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 85 V--GSRTLAEVILKYKDSESPVNCIVYDSLL--TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 85 ~--~~~~~~~l~~~~~~~~~~~Dlvi~D~~~--~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
. ....+..++++. +||+|+++... ..+..+++.+|+|++......
T Consensus 81 ~~~~~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~-------------------------- 129 (364)
T 1f0k_A 81 IFNAWRQARAIMKAY-----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG-------------------------- 129 (364)
T ss_dssp HHHHHHHHHHHHHHH-----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS--------------------------
T ss_pred HHHHHHHHHHHHHhc-----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC--------------------------
Confidence 0 112234444444 89999998643 346677889999998654321
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcccccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQ 240 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~ 240 (459)
.|+ .. .+.. .+..+.+++.+... + +++..+|+.+....+
T Consensus 130 -~~~--------------------~~----~~~~--~~~~d~v~~~~~~~--------~---~~~~~i~n~v~~~~~--- 168 (364)
T 1f0k_A 130 -IAG--------------------LT----NKWL--AKIATKVMQAFPGA--------F---PNAEVVGNPVRTDVL--- 168 (364)
T ss_dssp -SCC--------------------HH----HHHH--TTTCSEEEESSTTS--------S---SSCEECCCCCCHHHH---
T ss_pred -CCc--------------------HH----HHHH--HHhCCEEEecChhh--------c---CCceEeCCccchhhc---
Confidence 100 00 1111 12345555543221 1 134455543322100
Q ss_pred ccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCCCchhhhh
Q 012645 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKAS--EKPFLWVVKENENKLPVEFVN 318 (459)
Q Consensus 241 ~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~--~~~~v~~~~~~~~~~~~~~~~ 318 (459)
.+.. ....+...++++.|++..|+... ......+++++..+ +.+++++++... .+.+.+
T Consensus 169 ------------~~~~--~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~---~~~l~~ 229 (364)
T 1f0k_A 169 ------------ALPL--PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS---QQSVEQ 229 (364)
T ss_dssp ------------TSCC--HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC---HHHHHH
T ss_pred ------------ccch--hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch---HHHHHH
Confidence 0000 11122222344567777788753 33445555666554 455566666532 122221
Q ss_pred ---hcC-CCceEEeeecH-HHHhcccCccceeccCchhhHHHhhhcCCeeeccccc---cchhhHHHHHHHhhhceEEee
Q 012645 319 ---SVG-ETGLVVRWCNQ-FEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQF---SDQPTNAKFVEEVWEVGVRAK 390 (459)
Q Consensus 319 ---~~~-~~v~v~~~~p~-~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~---~DQ~~na~rv~~~~G~G~~~~ 390 (459)
..+ ++|.+.+|+++ ..+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..++
T Consensus 230 ~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~ 306 (364)
T 1f0k_A 230 AYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIE 306 (364)
T ss_dssp HHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECC
T ss_pred HHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEec
Confidence 122 58999999954 589988888 99999999999999999999999987 7999999999999 9999888
Q ss_pred ecCCCcccHHHHHHHHHHHhcCh
Q 012645 391 KNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 391 ~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.. +.+++.|.++|.++ |+
T Consensus 307 ~~---d~~~~~la~~i~~l--~~ 324 (364)
T 1f0k_A 307 QP---QLSVDAVANTLAGW--SR 324 (364)
T ss_dssp GG---GCCHHHHHHHHHTC--CH
T ss_pred cc---cCCHHHHHHHHHhc--CH
Confidence 66 67799999999988 65
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.71 E-value=3.5e-16 Score=143.71 Aligned_cols=260 Identities=15% Similarity=0.094 Sum_probs=163.0
Q ss_pred cEEEEEcCC----CccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYP----AQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~----~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
|||+|.+-+ +.||+.+++.||++|+ +|+|++.....+.++..|+....++.. +.
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~~g~~v~~l~~~----------d~-------- 58 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDEIPYPVYELSSE----------SI-------- 58 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGGCCSCEEECSSS----------CH--------
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHHCCCeEEEcCcc----------CH--------
Confidence 678888754 8999999999999997 899999765555555557777777521 11
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHH--HHHH-cCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALD--VARQ-FGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~--~a~~-lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
..+.+++++. ++|+||.|........ ..+. .+++.+.+.-..
T Consensus 59 ----~~~~~~l~~~-----~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~-------------------------- 103 (282)
T 3hbm_A 59 ----YELINLIKEE-----KFELLIIDHYGISVDDEKLIKLETGVKILSFDDEI-------------------------- 103 (282)
T ss_dssp ----HHHHHHHHHH-----TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSC--------------------------
T ss_pred ----HHHHHHHHhC-----CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCC--------------------------
Confidence 1233444444 8999999987754333 2223 577877653210
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhc-CC--CeeeecccCCCccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLG-LW--PLVMIGPLVPSAYL 237 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~--~~~~vgp~~~~~~~ 237 (459)
.. ..+|.++-.+...-.. .+.. .+ -..+.||-...
T Consensus 104 ---------~~--------------------------~~~Dllin~~~~~~~~----~Y~~~~p~~~~~l~G~~Y~~--- 141 (282)
T 3hbm_A 104 ---------KP--------------------------HHCDILLNVNAYAKAS----DYEGLVPFKCEVRCGFSYAL--- 141 (282)
T ss_dssp ---------CC--------------------------CCCSEEEECSTTCCGG----GGTTTCC-CCEEEESGGGCC---
T ss_pred ---------Cc--------------------------ccCCEEEeCCcccchh----hccccCCCCCeEeeCCcccc---
Confidence 00 0122222222110000 0010 01 14456762111
Q ss_pred cccccCCccCCCCCCCCChhhhhhhh-ccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhh
Q 012645 238 DQQIAGDSAYGANIWEPTGDQCMRWL-ATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEF 316 (459)
Q Consensus 238 ~~~~~~~~~~g~~~~~~~~~~l~~~l-~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~ 316 (459)
+.++....- ...++.+.|+|++|..... .....+++++.... ++.++.+.. ....+.+
T Consensus 142 -----------------lR~eF~~~~~~~r~~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~-~~~~~~l 200 (282)
T 3hbm_A 142 -----------------IREEFYQEAKENRKKKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSS-NPNLKKL 200 (282)
T ss_dssp -----------------CCHHHHHHTTCCCCCCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTT-CTTHHHH
T ss_pred -----------------cCHHHHHhhhhccccCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCC-chHHHHH
Confidence 111111110 0122356899999986432 35566778877654 566666554 2222333
Q ss_pred hhh--cCCCceEEeeecHH-HHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeee
Q 012645 317 VNS--VGETGLVVRWCNQF-EVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKK 391 (459)
Q Consensus 317 ~~~--~~~~v~v~~~~p~~-~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~ 391 (459)
.+. ..+|+.+..|+++. ++++.+++ +|++|| +|+.|+++.|+|+|++|...+|..||..+++. |++..+..
T Consensus 201 ~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 201 QKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp HHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 221 13589999999888 79988888 999999 89999999999999999999999999999999 99988875
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=1.7e-15 Score=133.38 Aligned_cols=131 Identities=15% Similarity=0.140 Sum_probs=92.9
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHH-----HHHHHhCC-CcEEEEEeCCCCCCchhhhhhc---------C----------
Q 012645 267 PEKSVIYVSFGSMADIAANQVDEI-----ARGLKASE-KPFLWVVKENENKLPVEFVNSV---------G---------- 321 (459)
Q Consensus 267 ~~~~~V~vs~Gs~~~~~~~~~~~i-----~~a~~~~~-~~~v~~~~~~~~~~~~~~~~~~---------~---------- 321 (459)
+++++|||+.||.... .+.+..+ ++++...+ .+++++++.............. |
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 4567999999997422 3333333 47787777 7888888764310111111011 1
Q ss_pred -------C--CceEEeeecHH-HHhc-ccCccceeccCchhhHHHhhhcCCeeeccccc----cchhhHHHHHHHhhhce
Q 012645 322 -------E--TGLVVRWCNQF-EVLA-HQAVGCFITHCGWNSILEGLSLGVAVVAVPQF----SDQPTNAKFVEEVWEVG 386 (459)
Q Consensus 322 -------~--~v~v~~~~p~~-~lL~-~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~----~DQ~~na~rv~~~~G~G 386 (459)
. ++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++++. |+|
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~~ 181 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GYV 181 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SCC
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CCE
Confidence 2 34455787776 8998 8888 99999999999999999999999974 3699999999999 998
Q ss_pred EEeeecCCCcccHHHHHHHHHHH
Q 012645 387 VRAKKNRAGIVTGEELNKCVNEV 409 (459)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~i~~l 409 (459)
..+ +++.|.++|.++
T Consensus 182 ~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 182 WSC--------APTETGLIAGLR 196 (224)
T ss_dssp CEE--------CSCTTTHHHHHH
T ss_pred EEc--------CHHHHHHHHHHH
Confidence 654 345566677666
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.47 E-value=3e-11 Score=119.33 Aligned_cols=375 Identities=13% Similarity=0.074 Sum_probs=189.7
Q ss_pred CCCcEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCeEEEEecCccccc--c--CCCCceEEEcCCCCCCCCC
Q 012645 5 RERVHVLVLTY-----------PAQGHINPLLQFAKRLASKRVKATLATTHYTVKS--I--HATTVGVEPISDGFDEGGF 69 (459)
Q Consensus 5 ~~~~kil~~~~-----------~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~--~--~~~g~~~~~~~~~~~~~~~ 69 (459)
++.|||++++. ...|+-.....|+++|.++||+|++++....... . ...|+.++.++.......
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~- 96 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL- 96 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC-
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc-
Confidence 45689999995 2367788899999999999999999987643211 1 125788777763211100
Q ss_pred CCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEEEccchHHHHHHHHHhhcc
Q 012645 70 KQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAAMMTNSASVCSMYWQINHG 147 (459)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 147 (459)
........+..+. ...++..++.. .+||+|++..... .+..+++.+|+|+|...+......
T Consensus 97 -~~~~~~~~~~~~~---~~~~~~~~~~~----~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~--------- 159 (438)
T 3c48_A 97 -SKEELPTQLAAFT---GGMLSFTRREK----VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK--------- 159 (438)
T ss_dssp -CGGGGGGGHHHHH---HHHHHHHHHHT----CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH---------
T ss_pred -chhHHHHHHHHHH---HHHHHHHHhcc----CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc---------
Confidence 0011111111111 11111112221 1499999875332 244567788999998766542110
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHh-cCCCee
Q 012645 148 LLTLPVNQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAML-GLWPLV 226 (459)
Q Consensus 148 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 226 (459)
... +...... .......+.+ ..+..++.+++.+-...+. ....+. ...++.
T Consensus 160 --------------~~~---~~~~~~~--------~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~-~~~~~g~~~~k~~ 211 (438)
T 3c48_A 160 --------------NSY---RDDSDTP--------ESEARRICEQ--QLVDNADVLAVNTQEEMQD-LMHHYDADPDRIS 211 (438)
T ss_dssp --------------SCC-------CCH--------HHHHHHHHHH--HHHHHCSEEEESSHHHHHH-HHHHHCCCGGGEE
T ss_pred --------------ccc---ccccCCc--------chHHHHHHHH--HHHhcCCEEEEcCHHHHHH-HHHHhCCChhheE
Confidence 000 0000000 0001111111 1234577888777654432 111111 111344
Q ss_pred eecccCCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh-C---CCcE
Q 012645 227 MIGPLVPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKA-S---EKPF 301 (459)
Q Consensus 227 ~vgp~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~-~---~~~~ 301 (459)
.+...+....+... .....+.+..-+.-. ++..+++..|+... -..+.+-..+..+.. . +.++
T Consensus 212 vi~ngvd~~~~~~~-----------~~~~~~~~r~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l 279 (438)
T 3c48_A 212 VVSPGADVELYSPG-----------NDRATERSRRELGIP-LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRV 279 (438)
T ss_dssp ECCCCCCTTTSCCC---------------CHHHHHHTTCC-SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEE
T ss_pred EecCCccccccCCc-----------ccchhhhhHHhcCCC-CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEE
Confidence 44433332110000 000001133333221 23367778888653 222333233333322 2 2344
Q ss_pred EEEEeCCC-CCCchhhh---hh--cCCCceEEeeecHH---HHhcccCccceecc----CchhhHHHhhhcCCeeecccc
Q 012645 302 LWVVKENE-NKLPVEFV---NS--VGETGLVVRWCNQF---EVLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQ 368 (459)
Q Consensus 302 v~~~~~~~-~~~~~~~~---~~--~~~~v~v~~~~p~~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~ 368 (459)
+++..... +...+.+. .. ..++|.+.+++|+. .+++.+++ +|.- |...++.||+++|+|+|+.+.
T Consensus 280 ~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~ 357 (438)
T 3c48_A 280 IICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV 357 (438)
T ss_dssp EEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC
T ss_pred EEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC
Confidence 44332100 11112222 11 35789999999864 67878888 7654 334689999999999998753
Q ss_pred ccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 012645 369 FSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGER-SQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFV 447 (459)
Q Consensus 369 ~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~ 447 (459)
......++.. +.|..++ .-+++++.++|.++++|++ .+.+.+++++..+.+.- ......+.++.
T Consensus 358 ----~~~~e~i~~~-~~g~~~~-----~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~~~~~~ 422 (438)
T 3c48_A 358 ----GGLPIAVAEG-ETGLLVD-----GHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSW-----AATAAQLSSLY 422 (438)
T ss_dssp ----TTHHHHSCBT-TTEEEES-----SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHH
T ss_pred ----CChhHHhhCC-CcEEECC-----CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHH
Confidence 3455555556 6787765 4578999999999999873 23455666666555332 12234455666
Q ss_pred HHHHHhc
Q 012645 448 VRLLKAD 454 (459)
Q Consensus 448 ~~l~~~~ 454 (459)
+.+....
T Consensus 423 ~~~~~~~ 429 (438)
T 3c48_A 423 NDAIANE 429 (438)
T ss_dssp HHHHHTC
T ss_pred HHHhhhc
Confidence 6665544
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.44 E-value=4.8e-11 Score=115.94 Aligned_cols=309 Identities=13% Similarity=0.073 Sum_probs=171.6
Q ss_pred CCCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEecCcccc----ccCCCCceEEEcCCCCCCCCCCCCCCHH
Q 012645 5 RERVHVLVLTY--P--AQGHINPLLQFAKRLASKRVKATLATTHYTVK----SIHATTVGVEPISDGFDEGGFKQAPSVK 76 (459)
Q Consensus 5 ~~~~kil~~~~--~--~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (459)
|++|||++++. + ..|.-.-+..+++.| +||+|++++...... .....++.+..++..... ...
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVML------PTP- 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCC------SCH-
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccc------cch-
Confidence 35699999985 3 467778889999999 799999999875532 223458888887642111 111
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEE-EccchHHHHHHHHHhhccCCCCCC
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAA-MMTNSASVCSMYWQINHGLLTLPV 153 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~-~~~~~~~~~~~~~~~~~~~~~~p~ 153 (459)
.....+..++++. +||+|++..... ....+++.+|+|.+. ..+......
T Consensus 73 --------~~~~~l~~~~~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~--------------- 124 (394)
T 3okp_A 73 --------TTAHAMAEIIRER-----EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW--------------- 124 (394)
T ss_dssp --------HHHHHHHHHHHHT-----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH---------------
T ss_pred --------hhHHHHHHHHHhc-----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh---------------
Confidence 1112344455554 899999765442 345567889998544 333221000
Q ss_pred CCCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCC
Q 012645 154 NQETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP 233 (459)
Q Consensus 154 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~ 233 (459)
..........+.. +..++.+++.+-...+. .........++..+.+.+.
T Consensus 125 ---------------------------~~~~~~~~~~~~~---~~~~d~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~ 173 (394)
T 3okp_A 125 ---------------------------SMLPGSRQSLRKI---GTEVDVLTYISQYTLRR-FKSAFGSHPTFEHLPSGVD 173 (394)
T ss_dssp ---------------------------TTSHHHHHHHHHH---HHHCSEEEESCHHHHHH-HHHHHCSSSEEEECCCCBC
T ss_pred ---------------------------hhcchhhHHHHHH---HHhCCEEEEcCHHHHHH-HHHhcCCCCCeEEecCCcC
Confidence 0001111122221 24567777777654432 2222211123444443332
Q ss_pred CccccccccCCccCCCCCCCC-Ch---hhhhhhhccCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCcEEEEEe
Q 012645 234 SAYLDQQIAGDSAYGANIWEP-TG---DQCMRWLATKPEKSVIYVSFGSMAD-IAANQVDEIARGLKA--SEKPFLWVVK 306 (459)
Q Consensus 234 ~~~~~~~~~~~~~~g~~~~~~-~~---~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~--~~~~~v~~~~ 306 (459)
.. ...+ .+ ..+.+.+.- +++..+++..|+... -..+.+-..+..+.. .+.+++++..
T Consensus 174 ~~---------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~ 237 (394)
T 3okp_A 174 VK---------------RFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGS 237 (394)
T ss_dssp TT---------------TSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred HH---------------HcCCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcC
Confidence 21 0111 11 223333322 233367777888643 223333333333322 2455555433
Q ss_pred CCCCCCchhhh---hhcCCCceEEeeecHH---HHhcccCccceec-----------cCchhhHHHhhhcCCeeeccccc
Q 012645 307 ENENKLPVEFV---NSVGETGLVVRWCNQF---EVLAHQAVGCFIT-----------HCGWNSILEGLSLGVAVVAVPQF 369 (459)
Q Consensus 307 ~~~~~~~~~~~---~~~~~~v~v~~~~p~~---~lL~~~~~~~~I~-----------HGG~gs~~eal~~GvP~li~P~~ 369 (459)
+ ...+.+. ....++|.+.+++|+. .+++.+++ +|. -|...++.||+++|+|+|+.+..
T Consensus 238 g---~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~ 312 (394)
T 3okp_A 238 G---RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG 312 (394)
T ss_dssp C---TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST
T ss_pred c---hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC
Confidence 2 2212221 2345789999999765 47877887 776 55667999999999999997753
Q ss_pred cchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 370 SDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 370 ~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.-+ .+... |.|..++ .-+++++.++|.++++|+
T Consensus 313 ~~~-----e~i~~-~~g~~~~-----~~d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 313 GAP-----ETVTP-ATGLVVE-----GSDVDKLSELLIELLDDP 345 (394)
T ss_dssp TGG-----GGCCT-TTEEECC-----TTCHHHHHHHHHHHHTCH
T ss_pred ChH-----HHHhc-CCceEeC-----CCCHHHHHHHHHHHHhCH
Confidence 211 12234 5565555 457999999999999987
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.43 E-value=6e-11 Score=116.97 Aligned_cols=379 Identities=14% Similarity=0.092 Sum_probs=188.8
Q ss_pred CCcEEEEEcCC-----CccCHHHHHHHHHHHHhCCCeEEEEecCcccccc--------------------CCCCceEEEc
Q 012645 6 ERVHVLVLTYP-----AQGHINPLLQFAKRLASKRVKATLATTHYTVKSI--------------------HATTVGVEPI 60 (459)
Q Consensus 6 ~~~kil~~~~~-----~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~--------------------~~~g~~~~~~ 60 (459)
++|||++++.. ..|--.-+..||++|+++||+|+++++......- ...|+.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 57999999842 3454556889999999999999999965332210 2357777777
Q ss_pred CCCCCCCCCCCCCCHHHH-HHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchh--HHHHHHHcCCceEEEccchHHH
Q 012645 61 SDGFDEGGFKQAPSVKAY-LESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTW--ALDVARQFGIYGAAMMTNSASV 137 (459)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~--~~~~a~~lgiP~v~~~~~~~~~ 137 (459)
+..+-.. .......... ...+... ...+..+++.+.....+||+|.+...... +..+++..|+|+|...+....
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~- 157 (439)
T 3fro_A 81 GGGLLDS-EDVYGPGWDGLIRKAVTF-GRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK- 157 (439)
T ss_dssp ESGGGGC-SSTTCSHHHHHHHHHHHH-HHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC-
T ss_pred cchhccc-cccccCCcchhhhhhHHH-HHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc-
Confidence 6411000 0011111111 2222111 22333444444222348999998765432 456667889999987664410
Q ss_pred HHHHHHhhccCCCCCCCCCCCcccCCCCCC--CCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHH
Q 012645 138 CSMYWQINHGLLTLPVNQETVPLTLPGLPS--LASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKEL 215 (459)
Q Consensus 138 ~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (459)
..++. .....+.... ........+. .+..++.+++.+-...+. .
T Consensus 158 -------------------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~ad~ii~~S~~~~~~-~ 203 (439)
T 3fro_A 158 -------------------------SKLPAFYFHEAGLSELA--PYPDIDPEHT------GGYIADIVTTVSRGYLID-E 203 (439)
T ss_dssp -------------------------CCEEHHHHHHTTCGGGC--CSSEECHHHH------HHHHCSEEEESCHHHHHH-T
T ss_pred -------------------------ccCchHHhCcccccccc--ccceeeHhhh------hhhhccEEEecCHHHHHH-H
Confidence 00000 0000000000 0000011111 123467777766554333 1
Q ss_pred HHHHh-cCCCeeeecccCCCcccccc-ccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcc-c-CCHHHHHHHH
Q 012645 216 LRAML-GLWPLVMIGPLVPSAYLDQQ-IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMA-D-IAANQVDEIA 291 (459)
Q Consensus 216 ~~~~~-~~~~~~~vgp~~~~~~~~~~-~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~-~~~~~~~~i~ 291 (459)
...+. ...++..+..-+....+... .+.. .......+.+-+.-. ++ .+++..|+.. . -..+.+-..+
T Consensus 204 ~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~ 274 (439)
T 3fro_A 204 WGFFRNFEGKITYVFNGIDCSFWNESYLTGS-------RDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAI 274 (439)
T ss_dssp HHHHGGGTTSEEECCCCCCTTTSCGGGSCSC-------HHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHH
T ss_pred hhhhhhcCCceeecCCCCCchhcCcccccch-------hhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHH
Confidence 11111 11244444433322111000 0000 000112233333322 33 7888888876 3 3344444444
Q ss_pred HHHHh----CCCcEEEEEeCCCCCCchhh---hhhcCCCceEEeeecHH---HHhcccCccceecc----CchhhHHHhh
Q 012645 292 RGLKA----SEKPFLWVVKENENKLPVEF---VNSVGETGLVVRWCNQF---EVLAHQAVGCFITH----CGWNSILEGL 357 (459)
Q Consensus 292 ~a~~~----~~~~~v~~~~~~~~~~~~~~---~~~~~~~v~v~~~~p~~---~lL~~~~~~~~I~H----GG~gs~~eal 357 (459)
..+.. .+.+++++ +.......+.+ ....++++.+.+|+|+. .+++.+++ +|.- |-..++.||+
T Consensus 275 ~~l~~~~~~~~~~l~i~-G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAm 351 (439)
T 3fro_A 275 EILSSKKEFQEMRFIII-GKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAM 351 (439)
T ss_dssp HHHHTSGGGGGEEEEEE-CCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHH
T ss_pred HHHHhcccCCCeEEEEE-cCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHH
Confidence 44443 23444443 32210000111 12234445556889876 46877777 6632 3447999999
Q ss_pred hcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc-Chh-hHHHHHHHHHHHHHHHHHHhc
Q 012645 358 SLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD-GER-SQKIKRNVSKWREFAKKAVSA 435 (459)
Q Consensus 358 ~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~l~~~~~~~~~~ 435 (459)
++|+|+|+.... . ...+.+. |.|..++ .-+++++.++|.++++ |++ .+.+.+++++..+.
T Consensus 352 a~G~Pvi~s~~~----~-~~e~~~~-~~g~~~~-----~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~------- 413 (439)
T 3fro_A 352 CLGAIPIASAVG----G-LRDIITN-ETGILVK-----AGDPGELANAILKALELSRSDLSKFRENCKKRAMS------- 413 (439)
T ss_dssp HTTCEEEEESST----H-HHHHCCT-TTCEEEC-----TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT-------
T ss_pred HCCCCeEEcCCC----C-cceeEEc-CceEEeC-----CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh-------
Confidence 999999987542 2 2334446 7777776 4689999999999998 652 23455555544432
Q ss_pred CCCcHHHHHHHHHHHHH
Q 012645 436 GGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 436 ~g~s~~~~~~~~~~l~~ 452 (459)
-+....++.+++-+.+
T Consensus 414 -~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 414 -FSWEKSAERYVKAYTG 429 (439)
T ss_dssp -SCHHHHHHHHHHHHHT
T ss_pred -CcHHHHHHHHHHHHHH
Confidence 4434555555544443
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.42 E-value=5.8e-12 Score=121.95 Aligned_cols=129 Identities=16% Similarity=0.214 Sum_probs=83.3
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCCCchhhhhh--cCCCceEEeeecH---HHHhc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENENKLPVEFVNS--VGETGLVVRWCNQ---FEVLA 337 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~~~~~~~~~~--~~~~v~v~~~~p~---~~lL~ 337 (459)
+++.|+++.|...... .+..+++++.. .+..+++..+.. ..+.+.+.+. ..++|++.+++++ ..+++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~-~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~ 273 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN-PVVREAVFPVLKGVRNFVLLDPLEYGSMAALMR 273 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC-HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC-HHHHHHHHHHhccCCCEEEECCCCHHHHHHHHH
Confidence 3457777777653322 34556666544 244555443321 1111222211 1358888865554 48897
Q ss_pred ccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 338 HQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 338 ~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+++ ||+.+| |.+.||+++|+|+|+.+...+++. +.+. |.|..+. .+++.|.+++.++++|+
T Consensus 274 ~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 274 ASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp TEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred hCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 7777 999884 556699999999999886666655 3567 8886653 37899999999999987
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.40 E-value=2.7e-12 Score=125.14 Aligned_cols=315 Identities=11% Similarity=0.072 Sum_probs=163.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccc----cCCCCceE-EEcCCCCCCCCCCCCCCHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKS----IHATTVGV-EPISDGFDEGGFKQAPSVKA 77 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~----~~~~g~~~-~~~~~~~~~~~~~~~~~~~~ 77 (459)
|++|||++++ |++....-+.+|.++|+++ |+++.++.+....+. ++..|+.. +.+ .- .....+...
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l----~v--~~~~~~~~~ 97 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDL----DI--MKKGQTLAE 97 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEEC----CC--CC-CCCHHH
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCccc----cc--CCCCCCHHH
Confidence 6678888887 6676677778899999987 688877766654321 11123311 111 11 011223332
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCC--Cc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCC
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDS--LL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVN 154 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~--~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (459)
. ... ....+.+++++. +||+|++-. .. +++..+|.++|||++.+...
T Consensus 98 ~---~~~-~~~~l~~~l~~~-----kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ag--------------------- 147 (403)
T 3ot5_A 98 I---TSR-VMNGINEVIAAE-----NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAG--------------------- 147 (403)
T ss_dssp H---HHH-HHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCC---------------------
T ss_pred H---HHH-HHHHHHHHHHHc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC---------------------
Confidence 2 111 223455566665 899998632 22 34578899999998765321
Q ss_pred CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCeeeeccc-
Q 012645 155 QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPLVMIGPL- 231 (459)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~vgp~- 231 (459)
. +. ... ..... .+..+.... ..++.+++.+-...+.. .. .+. .++..+|..
T Consensus 148 -------------l--rs-~~~---~~~~p--~~~~r~~~~--~~a~~~~~~se~~~~~l-~~--~Gi~~~~i~vvGn~~ 201 (403)
T 3ot5_A 148 -------------L--RT-WNK---YSPFP--EEMNRQLTG--VMADIHFSPTKQAKENL-LA--EGKDPATIFVTGNTA 201 (403)
T ss_dssp -------------C--CC-SCT---TSSTT--HHHHHHHHH--HHCSEEEESSHHHHHHH-HH--TTCCGGGEEECCCHH
T ss_pred -------------c--cc-ccc---ccCCc--HHHHHHHHH--HhcCEEECCCHHHHHHH-HH--cCCCcccEEEeCCch
Confidence 0 00 000 00000 111111111 12455566654432221 11 111 247788742
Q ss_pred CCCccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEe
Q 012645 232 VPSAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVK 306 (459)
Q Consensus 232 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~ 306 (459)
.....+... . ....+.+.+ + ++++.++++.|...... ..+..+++++.. .+.++++..+
T Consensus 202 ~D~~~~~~~---------~--~~~~~~~~~-l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~ 265 (403)
T 3ot5_A 202 IDALKTTVQ---------K--DYHHPILEN-L---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMH 265 (403)
T ss_dssp HHHHHHHSC---------T--TCCCHHHHS-C---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECC
T ss_pred HHHHHhhhh---------h--hcchHHHHh-c---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecC
Confidence 222111000 0 000121222 2 34557777665432211 124555555543 2445555433
Q ss_pred CCCCCCchhhhh--hcCCCceEEeeecH---HHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHH
Q 012645 307 ENENKLPVEFVN--SVGETGLVVRWCNQ---FEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE 381 (459)
Q Consensus 307 ~~~~~~~~~~~~--~~~~~v~v~~~~p~---~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~ 381 (459)
.+ ....+.+.+ ...+++++.+++++ ..+++++++ +|+-.|..+ .||.++|+|+|++|-..+++. +.+
T Consensus 266 ~~-~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~ 337 (403)
T 3ot5_A 266 LN-PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIE 337 (403)
T ss_dssp SC-HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHH
T ss_pred CC-HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----hee
Confidence 21 111111211 12368999998863 378878887 998875333 799999999999976666654 357
Q ss_pred hhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 382 VWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 382 ~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. |.|..+. .+++.|.+++.++++|+
T Consensus 338 ~-g~~~lv~------~d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 338 A-GTLKLIG------TNKENLIKEALDLLDNK 362 (403)
T ss_dssp H-TSEEECC------SCHHHHHHHHHHHHHCH
T ss_pred C-CcEEEcC------CCHHHHHHHHHHHHcCH
Confidence 8 8776553 37899999999999987
No 30
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.37 E-value=6.4e-12 Score=122.33 Aligned_cols=323 Identities=10% Similarity=0.059 Sum_probs=166.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCccccc----cCCCCceE-EEcCCCCCCCCCCCCCCHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTVKS----IHATTVGV-EPISDGFDEGGFKQAPSVKAY 78 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~----~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 78 (459)
|++|||++++ |++....-+.+|.++|+++ |+++.++.+....+. ++..+++. +.+. - .....+....
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~----~--~~~~~~~~~~ 95 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN----I--MEPGQTLNGV 95 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECC----C--CCTTCCHHHH
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeee----c--CCCCCCHHHH
Confidence 4456887777 7777778888899999887 789876666554321 12223310 1111 1 0112233332
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCccEEEe--CCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCC
Q 012645 79 LESFKTVGSRTLAEVILKYKDSESPVNCIVY--DSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQ 155 (459)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~--D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~ 155 (459)
. .. ....+.+++++. +||+|++ |..+ +.+..+|.++|||++.+.. .
T Consensus 96 ~---~~-~~~~l~~~l~~~-----kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~a-g--------------------- 144 (396)
T 3dzc_A 96 T---SK-ILLGMQQVLSSE-----QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEA-G--------------------- 144 (396)
T ss_dssp H---HH-HHHHHHHHHHHH-----CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETC-C---------------------
T ss_pred H---HH-HHHHHHHHHHhc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEEC-C---------------------
Confidence 1 11 223455566665 8999986 3233 3357788999999876532 1
Q ss_pred CCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCeeeecc-cC
Q 012645 156 ETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPLVMIGP-LV 232 (459)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~vgp-~~ 232 (459)
. +. ..+ ...+. ....+.... ..++.+++.+-...+. ... .+. .++..+|. ..
T Consensus 145 ------------~--rs-~~~---~~~~~--~~~~r~~~~--~~a~~~~~~se~~~~~-l~~--~G~~~~ki~vvGn~~~ 199 (396)
T 3dzc_A 145 ------------L--RT-GNI---YSPWP--EEGNRKLTA--ALTQYHFAPTDTSRAN-LLQ--ENYNAENIFVTGNTVI 199 (396)
T ss_dssp ------------C--CC-SCT---TSSTT--HHHHHHHHH--HTCSEEEESSHHHHHH-HHH--TTCCGGGEEECCCHHH
T ss_pred ------------c--cc-ccc---ccCCc--HHHHHHHHH--HhcCEEECCCHHHHHH-HHH--cCCCcCcEEEECCcHH
Confidence 0 00 000 00000 111111111 2355666666543222 111 111 13777874 32
Q ss_pred CCccccccccCCccCCCCCCCCChhhhhhhhc-cCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEe
Q 012645 233 PSAYLDQQIAGDSAYGANIWEPTGDQCMRWLA-TKPEKSVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVK 306 (459)
Q Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~-~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~ 306 (459)
....+....... .....+++.+.+. -.++++.|+++.+-..+... .+..+++++..+ +.++++..+
T Consensus 200 d~~~~~~~~~~~-------~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g 271 (396)
T 3dzc_A 200 DALLAVREKIHT-------DMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVH 271 (396)
T ss_dssp HHHHHHHHHHHH-------CHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECC
T ss_pred HHHHHhhhhccc-------chhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 221100000000 0000022233332 11345577766532222222 245667766542 445555443
Q ss_pred CCCCCCchhhhhh--cCCCceEEeeec---HHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHH
Q 012645 307 ENENKLPVEFVNS--VGETGLVVRWCN---QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE 381 (459)
Q Consensus 307 ~~~~~~~~~~~~~--~~~~v~v~~~~p---~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~ 381 (459)
.+ ....+.+.+. ..+++++.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|+..-..+++ .+.+
T Consensus 272 ~~-~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~ 343 (396)
T 3dzc_A 272 LN-PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVA 343 (396)
T ss_dssp BC-HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHH
T ss_pred CC-hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHH
Confidence 21 1111122211 236888887775 3478888888 999987 66689999999999975555543 3567
Q ss_pred hhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 382 VWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 382 ~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. |.+..+. .+++.|.+++.++++|+
T Consensus 344 ~-G~~~lv~------~d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 344 A-GTVKLVG------TNQQQICDALSLLLTDP 368 (396)
T ss_dssp H-TSEEECT------TCHHHHHHHHHHHHHCH
T ss_pred c-CceEEcC------CCHHHHHHHHHHHHcCH
Confidence 7 8774432 36899999999999987
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.33 E-value=2e-11 Score=118.49 Aligned_cols=130 Identities=14% Similarity=0.151 Sum_probs=84.0
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCCCchhhhhhc--CCCceEEeeecH---HHHhc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENENKLPVEFVNSV--GETGLVVRWCNQ---FEVLA 337 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~~~~~~~~~~~--~~~v~v~~~~p~---~~lL~ 337 (459)
+++.|+++.|+..... ..+..+++++.. .+.++++..+.. ..+.+.+.+.. .++|.+.+++++ ..+++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~ 281 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGHVKNVILIDPQEYLPFVWLMN 281 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHH
Confidence 3557888888765322 234445555543 244555433321 10112222111 268888776664 46888
Q ss_pred ccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 338 HQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 338 ~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+++ +|+.+| +++.||+++|+|+|+.+...+. ..+.+. |.|..++ . +++.|.++|.++++|+
T Consensus 282 ~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~-----~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 282 HAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVG-----T-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEEC-----S-SHHHHHHHHHHHHHCH
T ss_pred hCcE--EEECCc-chHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeC-----C-CHHHHHHHHHHHHhCh
Confidence 8888 999885 4588999999999999874443 335678 8887665 4 7899999999999987
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.32 E-value=6.4e-11 Score=112.96 Aligned_cols=124 Identities=15% Similarity=0.110 Sum_probs=82.6
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhhcCCCceEEeeecHH---HHhcccCccceec-
Q 012645 272 IYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQF---EVLAHQAVGCFIT- 346 (459)
Q Consensus 272 V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~v~~~~p~~---~lL~~~~~~~~I~- 346 (459)
+++..|+... ......++++++.++.+++++..... ..+. .+....+++|.+.+++|+. .+++.+++ +|.
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~-~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~v~p 238 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLAGPAWEPEYFD-EITRRYGSTVEPIGEVGGERRLDLLASAHA--VLAM 238 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEESCCCCHHHHH-HHHHHHTTTEEECCCCCHHHHHHHHHHCSE--EEEC
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEEeCcccHHHHH-HHHHHhCCCEEEeccCCHHHHHHHHHhCCE--EEEC
Confidence 4556677652 23456677777777777766543221 1111 1222345899999999976 78888888 662
Q ss_pred -c-----------Cc-hhhHHHhhhcCCeeeccccccchhhHHHHHHH--hhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 347 -H-----------CG-WNSILEGLSLGVAVVAVPQFSDQPTNAKFVEE--VWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 347 -H-----------GG-~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~--~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
. -| ..++.||+++|+|+|+... ......++. - +.|..++ . +.+++.++|.++++
T Consensus 239 s~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~-----~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 239 SQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD-----F-APDEARRTLAGLPA 307 (342)
T ss_dssp CCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC-----C-CHHHHHHHHHTSCC
T ss_pred CcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC-----C-CHHHHHHHHHHHHH
Confidence 2 33 3689999999999998775 345556666 4 4554443 6 89999999999987
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.30 E-value=1.8e-09 Score=105.23 Aligned_cols=307 Identities=13% Similarity=0.067 Sum_probs=163.5
Q ss_pred CCCcEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC----CCceEEEcCCCCCCCCCCCCCCHH
Q 012645 5 RERVHVLVLTYP---A-QGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA----TTVGVEPISDGFDEGGFKQAPSVK 76 (459)
Q Consensus 5 ~~~~kil~~~~~---~-~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~ 76 (459)
.++|||++++.. . .|.-.-+..++++|.++||+|++++.......... .+ .++.++.. ....
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~ 87 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYN---------GSVA 87 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC------------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEecccc---------CCcc
Confidence 356899999842 2 56667899999999999999999998755431111 11 22222200 0000
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCC
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVN 154 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 154 (459)
. +. +.......+..++++. +||+|++..... .+..+++.+++|+|...+..
T Consensus 88 ~-~~-~~~~~~~~l~~~l~~~-----~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~-------------------- 140 (406)
T 2gek_A 88 R-LR-FGPATHRKVKKWIAEG-----DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTS-------------------- 140 (406)
T ss_dssp -----CCHHHHHHHHHHHHHH-----CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCC--------------------
T ss_pred c-cc-ccHHHHHHHHHHHHhc-----CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCc--------------------
Confidence 0 00 0000112344455544 899999765442 35667778899999876532
Q ss_pred CCCCcccCCCCCCCCCCCCCccccCCCCChHHHHHHHHHh-hcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCC
Q 012645 155 QETVPLTLPGLPSLASSDLPSFLAQPASNPAYLAAILEQF-GSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVP 233 (459)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~ 233 (459)
.+. ......+.+.. ..+...+.+++.+-...+.. ...++. .++ .+.+.+.
T Consensus 141 -------~~~-------------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-~~~~~~-~~~-vi~~~v~ 191 (406)
T 2gek_A 141 -------TTK-------------------SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQ-MEALGS-DAV-EIPNGVD 191 (406)
T ss_dssp -------CCS-------------------HHHHHHHHSTTHHHHTTCSEEEESSHHHHHHH-HHHHSS-CEE-ECCCCBC
T ss_pred -------chh-------------------hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHH-HHhcCC-CcE-EecCCCC
Confidence 000 00001111111 22356777777775543321 112221 123 3333222
Q ss_pred CccccccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCc-cc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCC
Q 012645 234 SAYLDQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSM-AD-IAANQVDEIARGLKA--SEKPFLWVVKENE 309 (459)
Q Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~-~~-~~~~~~~~i~~a~~~--~~~~~v~~~~~~~ 309 (459)
...+... .... -+ ++...+++..|+. .. -..+.+-..+..+.+ .+.+++++ +.
T Consensus 192 ~~~~~~~-------------~~~~----~~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~-- 248 (406)
T 2gek_A 192 VASFADA-------------PLLD----GY---PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV-GR-- 248 (406)
T ss_dssp HHHHHTC-------------CCCT----TC---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE-SC--
T ss_pred hhhcCCC-------------chhh----hc---cCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE-cC--
Confidence 1100000 0000 00 0112567777887 43 223333333333332 24454444 32
Q ss_pred CCCchhhhhh---cCCCceEEeeecHH---HHhcccCccceec----cCch-hhHHHhhhcCCeeeccccccchhhHHHH
Q 012645 310 NKLPVEFVNS---VGETGLVVRWCNQF---EVLAHQAVGCFIT----HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKF 378 (459)
Q Consensus 310 ~~~~~~~~~~---~~~~v~v~~~~p~~---~lL~~~~~~~~I~----HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~r 378 (459)
+.. +.+.+. ..++|.+.+++|+. .+++.+++ +|. +.|+ .++.||+++|+|+|+.+. ......
T Consensus 249 ~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~ 321 (406)
T 2gek_A 249 GDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRV 321 (406)
T ss_dssp SCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHH
T ss_pred CcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHH
Confidence 111 233221 25789999999875 78888888 663 3444 489999999999998765 456666
Q ss_pred HHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 379 VEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 379 v~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+... +.|..++ .-+.+++.++|.++++|+
T Consensus 322 i~~~-~~g~~~~-----~~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 322 LADG-DAGRLVP-----VDDADGMAAALIGILEDD 350 (406)
T ss_dssp HTTT-TSSEECC-----TTCHHHHHHHHHHHHHCH
T ss_pred hcCC-CceEEeC-----CCCHHHHHHHHHHHHcCH
Confidence 6666 6777665 467899999999999987
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.25 E-value=3.6e-10 Score=109.09 Aligned_cols=129 Identities=14% Similarity=0.155 Sum_probs=81.0
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCCC-CCchhhhhhcC--CCceEEeeecHH---HHh
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVKENEN-KLPVEFVNSVG--ETGLVVRWCNQF---EVL 336 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~~~~~-~~~~~~~~~~~--~~v~v~~~~p~~---~lL 336 (459)
+++.++++.|...... ..+..+++++..+ +.+++ ++.... .+.+.+.+... ++|.+.+++++. .++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i--~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVV--YPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEE--EECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEE--EeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 3456777788754321 2345566665442 33433 332211 01112222122 689987777654 678
Q ss_pred cccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 337 AHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 337 ~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
+.+++ +|+..| +++.||+++|+|+|+....... ..+.+. |.|..++ . ++++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~-----~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 ARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAG-----T-DEETIFSLADELLSDK 343 (375)
T ss_dssp HTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECC-----S-CHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcC-----C-CHHHHHHHHHHHHhCh
Confidence 77777 998874 5588999999999988543332 335677 8776654 3 7899999999999987
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.22 E-value=2e-09 Score=103.72 Aligned_cols=143 Identities=17% Similarity=0.280 Sum_probs=92.9
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCC----c-EEEEEeCCCCCCchhhhh---h--cCCCceEEeeecHH-HHhc
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKASEK----P-FLWVVKENENKLPVEFVN---S--VGETGLVVRWCNQF-EVLA 337 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~----~-~v~~~~~~~~~~~~~~~~---~--~~~~v~v~~~~p~~-~lL~ 337 (459)
+..+++..|+... ......+++++..+.. + -+++++... .+.+.+ . ..++|.+.++..+. .+++
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~---~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 269 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK---PRKFEALAEKLGVRSNVHFFSGRNDVSELMA 269 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC---CHHHHHHHHHHTCGGGEEEESCCSCHHHHHH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC---HHHHHHHHHHcCCCCcEEECCCcccHHHHHH
Confidence 3467778887653 2345556677766532 2 233333321 122221 1 24788888876544 7898
Q ss_pred ccCccceec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 338 HQAVGCFIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 338 ~~~~~~~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+++ +|. -|..+++.||+++|+|+|+... ..+...++.. +.|..+.. .-+.+++.++|.++++|+
T Consensus 270 ~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 270 AADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE----PFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp HCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS----SCCHHHHHHHHHHHHHCH
T ss_pred hcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC----CCCHHHHHHHHHHHHcCh
Confidence 8888 775 5667899999999999999764 3556677888 88887762 357899999999999987
Q ss_pred h-hHHHHHHHHHHHH
Q 012645 414 R-SQKIKRNVSKWRE 427 (459)
Q Consensus 414 ~-~~~~~~~a~~l~~ 427 (459)
+ .+.+.+++++..+
T Consensus 339 ~~~~~~~~~~~~~~~ 353 (374)
T 2iw1_A 339 PLRMAWAENARHYAD 353 (374)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 2 1233444444333
No 36
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.19 E-value=1.5e-09 Score=109.20 Aligned_cols=142 Identities=10% Similarity=0.068 Sum_probs=87.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCC-----CcEEEEEeCCCCC------C-------chhhhh-----hcCCCceEE
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKASE-----KPFLWVVKENENK------L-------PVEFVN-----SVGETGLVV 327 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~~~-----~~~v~~~~~~~~~------~-------~~~~~~-----~~~~~v~v~ 327 (459)
.+++..|+... ...+..+++++..+. ...+++++...+. + .+.+.+ ...++|.+.
T Consensus 263 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~ 340 (499)
T 2r60_A 263 PAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMF 340 (499)
T ss_dssp CEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEE
T ss_pred cEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEEC
Confidence 56777888643 233555666666542 1234444431111 1 122221 135789999
Q ss_pred eeecHH---HHhccc----Cccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCc
Q 012645 328 RWCNQF---EVLAHQ----AVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGI 396 (459)
Q Consensus 328 ~~~p~~---~lL~~~----~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 396 (459)
+++|+. .+++.+ ++ +|.- |-..++.||+++|+|+|+... ......+..- ..|..++ .
T Consensus 341 G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~-----~ 408 (499)
T 2r60_A 341 PLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVD-----P 408 (499)
T ss_dssp ECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEEC-----T
T ss_pred CCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeC-----C
Confidence 999765 577777 77 7632 334689999999999998753 3444445554 5787776 4
Q ss_pred ccHHHHHHHHHHHhcChh-hHHHHHHHHHHH
Q 012645 397 VTGEELNKCVNEVMDGER-SQKIKRNVSKWR 426 (459)
Q Consensus 397 ~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~ 426 (459)
-+.+.+.++|.++++|++ .+.+.+++++..
T Consensus 409 ~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 439 (499)
T 2r60_A 409 EDPEDIARGLLKAFESEETWSAYQEKGKQRV 439 (499)
T ss_dssp TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 678999999999999873 223444444433
No 37
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.13 E-value=1.9e-07 Score=90.65 Aligned_cols=315 Identities=12% Similarity=0.139 Sum_probs=162.5
Q ss_pred cEEEEEcCCC-ccCHHHHHHHHHHHHhCCCeEEEEecCccccc-cCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPA-QGHINPLLQFAKRLASKRVKATLATTHYTVKS-IHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~-~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
.++....+|. .|.-.-...|+++|+++||+|++++....... ....++.+..++..-... ... .. ..+.
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~-~~--~~~~----- 86 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSV-FQY-PP--YDLA----- 86 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC-----CCS-CC--HHHH-----
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccc-ccc-cc--ccHH-----
Confidence 5677777775 45556678999999999999999998543221 223577776654210000 000 00 1111
Q ss_pred chHHHHHHHHHhhcCCCCccEEEeCCCch--hHHHHHHH-c--CCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 86 GSRTLAEVILKYKDSESPVNCIVYDSLLT--WALDVARQ-F--GIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~--~~~~~a~~-l--giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
....+..++++. +||+|++..... ....++.. + ++|+|...+.....
T Consensus 87 ~~~~l~~~l~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----------------------- 138 (394)
T 2jjm_A 87 LASKMAEVAQRE-----NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT----------------------- 138 (394)
T ss_dssp HHHHHHHHHHHH-----TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----------------------
T ss_pred HHHHHHHHHHHc-----CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-----------------------
Confidence 112334455554 899999874432 23334443 3 59998876543100
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcCCCeeeecccCCCcccccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGLWPLVMIGPLVPSAYLDQQ 240 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~ 240 (459)
. ... ........+. .+..++.+++.+-...+. .........++..+...+....+
T Consensus 139 -~-----~~~---------~~~~~~~~~~------~~~~ad~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~~~~~--- 193 (394)
T 2jjm_A 139 -V-----LGS---------DPSLNNLIRF------GIEQSDVVTAVSHSLINE-THELVKPNKDIQTVYNFIDERVY--- 193 (394)
T ss_dssp -T-----TTT---------CTTTHHHHHH------HHHHSSEEEESCHHHHHH-HHHHTCCSSCEEECCCCCCTTTC---
T ss_pred -c-----cCC---------CHHHHHHHHH------HHhhCCEEEECCHHHHHH-HHHhhCCcccEEEecCCccHHhc---
Confidence 0 000 0001111111 124567777776554332 11121111234444433322100
Q ss_pred ccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh----CCCcEEEEEeCCCCCCchhh
Q 012645 241 IAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKA----SEKPFLWVVKENENKLPVEF 316 (459)
Q Consensus 241 ~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~----~~~~~v~~~~~~~~~~~~~~ 316 (459)
.....+.+..-+... ++..+++..|+.... ..+..+++++.. .+.+++++ +.. ...+.+
T Consensus 194 -----------~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~-G~g--~~~~~l 256 (394)
T 2jjm_A 194 -----------FKRDMTQLKKEYGIS-ESEKILIHISNFRKV--KRVQDVVQAFAKIVTEVDAKLLLV-GDG--PEFCTI 256 (394)
T ss_dssp -----------CCCCCHHHHHHTTCC----CEEEEECCCCGG--GTHHHHHHHHHHHHHSSCCEEEEE-CCC--TTHHHH
T ss_pred -----------CCcchHHHHHHcCCC-CCCeEEEEeeccccc--cCHHHHHHHHHHHHhhCCCEEEEE-CCc--hHHHHH
Confidence 001122233333221 223566677886531 223333444333 34554444 322 111222
Q ss_pred hh---h--cCCCceEEeeecHH-HHhcccCcccee----ccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhce
Q 012645 317 VN---S--VGETGLVVRWCNQF-EVLAHQAVGCFI----THCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVG 386 (459)
Q Consensus 317 ~~---~--~~~~v~v~~~~p~~-~lL~~~~~~~~I----~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G 386 (459)
.+ . ..++|.+.++..+. .+++.+++ +| .-|..+++.||+++|+|+|+.+.. .....++.. +.|
T Consensus 257 ~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g 329 (394)
T 2jjm_A 257 LQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTG 329 (394)
T ss_dssp HHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTE
T ss_pred HHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-Cce
Confidence 21 1 24678888876543 78988888 77 556678999999999999988753 222233344 567
Q ss_pred EEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 387 VRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 387 ~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
..++ .-+.+++.++|.++++|+
T Consensus 330 ~~~~-----~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 330 YLCE-----VGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp EEEC-----TTCHHHHHHHHHHHHHCH
T ss_pred EEeC-----CCCHHHHHHHHHHHHcCH
Confidence 6665 457899999999999987
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.95 E-value=1.1e-07 Score=92.88 Aligned_cols=129 Identities=14% Similarity=0.035 Sum_probs=78.9
Q ss_pred cEEEEEeCCcccC-CHHHHHHHHHHHHh--CCCcEEEEEeCCCCCCc---h---hhhhh--cCCCceEEeeec---H---
Q 012645 270 SVIYVSFGSMADI-AANQVDEIARGLKA--SEKPFLWVVKENENKLP---V---EFVNS--VGETGLVVRWCN---Q--- 332 (459)
Q Consensus 270 ~~V~vs~Gs~~~~-~~~~~~~i~~a~~~--~~~~~v~~~~~~~~~~~---~---~~~~~--~~~~v~v~~~~p---~--- 332 (459)
..+++..|..... ..+.+-..+..+.. .+.+++++..+. ...+ + .+.+. ..++|.+.+|++ +
T Consensus 231 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 231 KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMA-HDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREV 309 (416)
T ss_dssp SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCC-TTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHH
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCc-ccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHH
Confidence 3566677876532 23333333333322 356666654432 1001 1 11111 347899999876 2
Q ss_pred HHHhcccCccceeccC----chhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHH
Q 012645 333 FEVLAHQAVGCFITHC----GWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNE 408 (459)
Q Consensus 333 ~~lL~~~~~~~~I~HG----G~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ 408 (459)
..+++.+++ +|.-. ...++.||+++|+|+|+.+. ..+...++.. +.|..++ +.+++.++|.+
T Consensus 310 ~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~-------d~~~la~~i~~ 375 (416)
T 2x6q_A 310 NAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR-------DANEAVEVVLY 375 (416)
T ss_dssp HHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES-------SHHHHHHHHHH
T ss_pred HHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC-------CHHHHHHHHHH
Confidence 267877887 77543 45689999999999998764 3455555555 5675553 67899999999
Q ss_pred HhcCh
Q 012645 409 VMDGE 413 (459)
Q Consensus 409 ll~~~ 413 (459)
+++|+
T Consensus 376 ll~~~ 380 (416)
T 2x6q_A 376 LLKHP 380 (416)
T ss_dssp HHHCH
T ss_pred HHhCH
Confidence 99987
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.93 E-value=3.7e-09 Score=102.07 Aligned_cols=311 Identities=11% Similarity=0.086 Sum_probs=165.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccc-ccCC---CCceEEEcCCC-CCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVK-SIHA---TTVGVEPISDG-FDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~-~~~~---~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 82 (459)
.|++++ .|++-.+.-+.++.++|.++ ++..++.+....+ .+.+ .++.. +-|+. +.. ..++......
T Consensus 10 ~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i-~~~~~~l~~----~~~~~~~~~~-- 80 (385)
T 4hwg_A 10 LKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGI-RKPDYFLEV----AADNTAKSIG-- 80 (385)
T ss_dssp CEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCC-CCCSEECCC----CCCCSHHHHH--
T ss_pred hheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCC-CCCceecCC----CCCCHHHHHH--
Confidence 355555 48888888899999999877 9988888776643 2222 22222 11111 111 1122222221
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEe--CCCchhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCCcc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVY--DSLLTWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETVPL 160 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~--D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 160 (459)
.....+.+++++. +||+|+. |..+.++..+|.++|||++.+...
T Consensus 81 --~~~~~l~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag--------------------------- 126 (385)
T 4hwg_A 81 --LVIEKVDEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG--------------------------- 126 (385)
T ss_dssp --HHHHHHHHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC---------------------------
T ss_pred --HHHHHHHHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC---------------------------
Confidence 1233455666665 8999985 334444588899999997765321
Q ss_pred cCCCCCCCCCCCCCccccCCCCChHHHHHHHHHhhcccCCceEEEcchhHhhHHHHHHHhcC--CCeeeecc-cCCCccc
Q 012645 161 TLPGLPSLASSDLPSFLAQPASNPAYLAAILEQFGSLNKNDWVLCNSFEELEKELLRAMLGL--WPLVMIGP-LVPSAYL 237 (459)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~vgp-~~~~~~~ 237 (459)
+.. +. ........+. ... .-++..++.+-...+. .. . .+. .+++.+|. ......+
T Consensus 127 -------lrs------~~-~~~pee~nR~---~~~--~~a~~~~~~te~~~~~-l~-~-~G~~~~~I~vtGnp~~D~~~~ 184 (385)
T 4hwg_A 127 -------NRC------FD-QRVPEEINRK---IID--HISDVNITLTEHARRY-LI-A-EGLPAELTFKSGSHMPEVLDR 184 (385)
T ss_dssp -------CCC------SC-TTSTHHHHHH---HHH--HHCSEEEESSHHHHHH-HH-H-TTCCGGGEEECCCSHHHHHHH
T ss_pred -------Ccc------cc-ccCcHHHHHH---HHH--hhhceeecCCHHHHHH-HH-H-cCCCcCcEEEECCchHHHHHH
Confidence 100 00 0000111111 111 1245555555443222 11 0 111 24778884 2221111
Q ss_pred cccccCCccCCCCCCCCChhhhhhhhccCCCCcEEEEEeCCcccCC-HHHHHHHHHHHHhC----CCcEEEEEeCCCCCC
Q 012645 238 DQQIAGDSAYGANIWEPTGDQCMRWLATKPEKSVIYVSFGSMADIA-ANQVDEIARGLKAS----EKPFLWVVKENENKL 312 (459)
Q Consensus 238 ~~~~~~~~~~g~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~i~~a~~~~----~~~~v~~~~~~~~~~ 312 (459)
.... ...+++.+.+.-. +++.|+++.|...+.. ...+..+++++..+ +..+|+..... .
T Consensus 185 ~~~~------------~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~---~ 248 (385)
T 4hwg_A 185 FMPK------------ILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR---T 248 (385)
T ss_dssp HHHH------------HHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH---H
T ss_pred hhhh------------cchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH---H
Confidence 0000 0011133333322 3558888888754332 24566677776553 45666654311 1
Q ss_pred chhhhhh-----cCCCceEEeeec---HHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh
Q 012645 313 PVEFVNS-----VGETGLVVRWCN---QFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE 384 (459)
Q Consensus 313 ~~~~~~~-----~~~~v~v~~~~p---~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G 384 (459)
.+.+.+. ..+|+++.+.++ ...+++++++ +|+-.|. .+.||.+.|+|+|+++...+.+. ..+. |
T Consensus 249 ~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G 320 (385)
T 4hwg_A 249 KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-G 320 (385)
T ss_dssp HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-T
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-C
Confidence 1111111 135787766554 4578988888 9998775 46999999999999987554332 3567 7
Q ss_pred ceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 385 VGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 385 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
.+..+. .+++.|.+++.++++|+
T Consensus 321 ~~~lv~------~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 321 TLIMSG------FKAERVLQAVKTITEEH 343 (385)
T ss_dssp CCEECC------SSHHHHHHHHHHHHTTC
T ss_pred ceEEcC------CCHHHHHHHHHHHHhCh
Confidence 665442 47899999999999986
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.78 E-value=2.2e-06 Score=85.47 Aligned_cols=129 Identities=11% Similarity=0.028 Sum_probs=75.8
Q ss_pred EEEEEeCCcccC-CHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhh---hhcCCCce-EEeeecHH--HHhcccCccc
Q 012645 271 VIYVSFGSMADI-AANQVDEIARGLKASEKPFLWVVKENENKLPVEFV---NSVGETGL-VVRWCNQF--EVLAHQAVGC 343 (459)
Q Consensus 271 ~V~vs~Gs~~~~-~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~v~-v~~~~p~~--~lL~~~~~~~ 343 (459)
.+++..|+.... ..+.+-..+..+...+.+++++..+. ....+.+. ...+++|. +.++.... .+++.+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv-- 368 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD-VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA-- 368 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC-HHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSE--
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc-hHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCE--
Confidence 477788887642 23333333333333466666654431 01112221 22357887 56773332 57878887
Q ss_pred eec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh----------ceEEeeecCCCcccHHHHHHHHHHH
Q 012645 344 FIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE----------VGVRAKKNRAGIVTGEELNKCVNEV 409 (459)
Q Consensus 344 ~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G----------~G~~~~~~~~~~~~~~~l~~~i~~l 409 (459)
+|. -|-..++.||+++|+|+|+.... .... +... | .|..++ .-++++|.++|.++
T Consensus 369 ~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e-~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~la~~i~~l 437 (485)
T 1rzu_A 369 IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLAD-TVID-ANHAALASKAATGVQFS-----PVTLDGLKQAIRRT 437 (485)
T ss_dssp EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHH-HCCB-CCHHHHHTTCCCBEEES-----SCSHHHHHHHHHHH
T ss_pred EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhh-eecc-cccccccccCCcceEeC-----CCCHHHHHHHHHHH
Confidence 763 24456899999999999987642 2222 2222 2 465554 46789999999999
Q ss_pred h---cCh
Q 012645 410 M---DGE 413 (459)
Q Consensus 410 l---~~~ 413 (459)
+ +|+
T Consensus 438 l~~~~~~ 444 (485)
T 1rzu_A 438 VRYYHDP 444 (485)
T ss_dssp HHHHTCH
T ss_pred HHHhCCH
Confidence 9 676
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.74 E-value=9.6e-06 Score=80.82 Aligned_cols=131 Identities=12% Similarity=0.071 Sum_probs=75.7
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhh---hhcCCCce-EEeeecHH--HHhcccCc
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFV---NSVGETGL-VVRWCNQF--EVLAHQAV 341 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~v~-v~~~~p~~--~lL~~~~~ 341 (459)
+..+++..|.... -..+.+-..+..+...+.+++++..+. ....+.+. ...+++|. +.++.... .+++.+++
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 369 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD-PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADV 369 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC-HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc-hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 3366677777643 223333333333333466666665432 01112221 22346786 66774332 67878888
Q ss_pred cceec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhh----------ceEEeeecCCCcccHHHHHHHHH
Q 012645 342 GCFIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWE----------VGVRAKKNRAGIVTGEELNKCVN 407 (459)
Q Consensus 342 ~~~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G----------~G~~~~~~~~~~~~~~~l~~~i~ 407 (459)
+|. -|...++.||+++|+|+|+.... .... +... | .|..++ .-+++++.++|.
T Consensus 370 --~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e-~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~la~~i~ 436 (485)
T 2qzs_A 370 --ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLAD-TVSD-CSLENLADGVASGFVFE-----DSNAWSLLRAIR 436 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHH-HCCB-CCHHHHHTTCCCBEEEC-----SSSHHHHHHHHH
T ss_pred --EEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccc-eecc-CccccccccccceEEEC-----CCCHHHHHHHHH
Confidence 663 23446889999999999987542 2222 2222 2 465555 457899999999
Q ss_pred HHh---cCh
Q 012645 408 EVM---DGE 413 (459)
Q Consensus 408 ~ll---~~~ 413 (459)
+++ +|+
T Consensus 437 ~ll~~~~~~ 445 (485)
T 2qzs_A 437 RAFVLWSRP 445 (485)
T ss_dssp HHHHHHTSH
T ss_pred HHHHHcCCH
Confidence 999 676
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.70 E-value=6.9e-07 Score=93.59 Aligned_cols=131 Identities=9% Similarity=0.121 Sum_probs=78.7
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCC--CCC------chhhh---h--hcCCCceEEe--
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKAS-----EKPFLWVVKENE--NKL------PVEFV---N--SVGETGLVVR-- 328 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~-----~~~~v~~~~~~~--~~~------~~~~~---~--~~~~~v~v~~-- 328 (459)
+.++++..|.... ...+..+++|+..+ +.+++++..... ... .+.+. + ...++|.+.+
T Consensus 571 ~~~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 571 KKPILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp TSCEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CCeEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 3467778888753 23345555665553 345555544321 000 01111 1 1347888887
Q ss_pred --eecHHHHhc----ccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCccc
Q 012645 329 --WCNQFEVLA----HQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVT 398 (459)
Q Consensus 329 --~~p~~~lL~----~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~ 398 (459)
++|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |-......++.- +.|..++ .-+
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~-----p~D 716 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHID-----PYH 716 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEEC-----TTS
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeC-----CCC
Confidence 445555543 3456 7732 3446899999999999986 444455555555 6787776 457
Q ss_pred HHHHHHHHHHHh----cCh
Q 012645 399 GEELNKCVNEVM----DGE 413 (459)
Q Consensus 399 ~~~l~~~i~~ll----~~~ 413 (459)
++.+.++|.+++ .|+
T Consensus 717 ~e~LA~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 717 GDQAADTLADFFTKCKEDP 735 (816)
T ss_dssp HHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHhccCH
Confidence 889999997776 776
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.67 E-value=1e-05 Score=78.74 Aligned_cols=130 Identities=11% Similarity=0.111 Sum_probs=77.0
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCC---CCchhhhh-----hcCCC-------ceEEe
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKA-----SEKPFLWVVKENEN---KLPVEFVN-----SVGET-------GLVVR 328 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~-----~~~~~v~~~~~~~~---~~~~~~~~-----~~~~~-------v~v~~ 328 (459)
+..+++..|+.... ..+..+++++.. .+.+++++..+... .+.+.+.+ ...++ +.+.+
T Consensus 183 ~~~~il~vGr~~~~--Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 183 DDVLFLNMNRNTAR--KRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp TSEEEECCSCSSGG--GTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred CceEEEEcCCCchh--cCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 34788888886431 223334444333 45677766654321 11122221 13343 55568
Q ss_pred eecHH---HHhcccCccceec----cCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhc---------------e
Q 012645 329 WCNQF---EVLAHQAVGCFIT----HCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEV---------------G 386 (459)
Q Consensus 329 ~~p~~---~lL~~~~~~~~I~----HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~---------------G 386 (459)
|+|+. .+++.+++ +|. -|...++.||+++|+|+|+.... .....+..- .. |
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~-~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGD-CVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTT-TSEEECCCEEEECTTTCS
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccC-cccccccccccccccccC
Confidence 99854 57877887 663 23445899999999999986532 333333322 21 4
Q ss_pred E--EeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 387 V--RAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 387 ~--~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. .+. .-+++++.++| ++++|+
T Consensus 334 ~~gl~~-----~~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 334 IGGIEG-----IIDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp SCCEEE-----ECCHHHHHHHH-HHTTSH
T ss_pred cceeeC-----CCCHHHHHHHH-HHhcCH
Confidence 4 444 35899999999 999987
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.49 E-value=2.8e-05 Score=75.64 Aligned_cols=114 Identities=11% Similarity=-0.007 Sum_probs=74.7
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHh--CCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHH---HHhcccCcccee
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKA--SEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQF---EVLAHQAVGCFI 345 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~---~lL~~~~~~~~I 345 (459)
.+++..|+.... ... +.++.+ .+.+++++ +.+ .. ... ...+||.+.+++|+. .+++.+++ +|
T Consensus 223 ~~i~~vGrl~~~-Kg~----~~~l~~~~~~~~l~iv-G~g--~~-~~~--~l~~~V~f~G~~~~~~l~~~~~~adv--~v 289 (406)
T 2hy7_A 223 IHAVAVGSMLFD-PEF----FVVASKAFPQVTFHVI-GSG--MG-RHP--GYGDNVIVYGEMKHAQTIGYIKHARF--GI 289 (406)
T ss_dssp EEEEEECCTTBC-HHH----HHHHHHHCTTEEEEEE-SCS--SC-CCT--TCCTTEEEECCCCHHHHHHHHHTCSE--EE
T ss_pred cEEEEEeccccc-cCH----HHHHHHhCCCeEEEEE-eCc--hH-Hhc--CCCCCEEEcCCCCHHHHHHHHHhcCE--EE
Confidence 677788887643 222 333332 34444444 332 11 111 245789999999865 57877887 66
Q ss_pred c---cCch-hhHHHhh-------hcCCeeeccccccchhhHHHHHHHhhhceEE-eeecCCCcccHHHHHHHHHHHhcCh
Q 012645 346 T---HCGW-NSILEGL-------SLGVAVVAVPQFSDQPTNAKFVEEVWEVGVR-AKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 346 ~---HGG~-gs~~eal-------~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
. +.|. +++.||+ ++|+|+|+... +..- ..|.. ++ .-+++.|.++|.++++|+
T Consensus 290 ~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~-----~~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 290 APYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYT-----PGNADSVIAAITQALEAP 353 (406)
T ss_dssp CCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEEC-----TTCHHHHHHHHHHHHHCC
T ss_pred ECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeC-----CCCHHHHHHHHHHHHhCc
Confidence 3 3344 5788999 99999998765 4444 55765 55 467899999999999987
No 45
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.44 E-value=6.9e-05 Score=76.17 Aligned_cols=83 Identities=7% Similarity=0.037 Sum_probs=61.9
Q ss_pred CCceEEeeecHH---HHhcccCcccee---ccCchhhHHHhhhcCCeeeccccccc-hhhHHHHHHHhhhceEEeeecCC
Q 012645 322 ETGLVVRWCNQF---EVLAHQAVGCFI---THCGWNSILEGLSLGVAVVAVPQFSD-QPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 322 ~~v~v~~~~p~~---~lL~~~~~~~~I---~HGG~gs~~eal~~GvP~li~P~~~D-Q~~na~rv~~~~G~G~~~~~~~~ 394 (459)
++|++.+++|+. .+++.+++ || ..|+..++.||+++|+|+|++|-..= -..-+..+... |+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhc----
Confidence 789999999854 56877887 76 23667899999999999999774311 11224566777 7776553
Q ss_pred CcccHHHHHHHHHHHhcCh
Q 012645 395 GIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~~~ 413 (459)
-+++.+.+++.++++|+
T Consensus 507 --~~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 507 --ADDAAFVAKAVALASDP 523 (568)
T ss_dssp --SSHHHHHHHHHHHHHCH
T ss_pred --CCHHHHHHHHHHHhcCH
Confidence 27899999999999997
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.42 E-value=1.1e-06 Score=74.93 Aligned_cols=139 Identities=10% Similarity=0.105 Sum_probs=91.4
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhC-CCcEEEEEeCCC-CCCchhh---hhhcCCCceEEeeecH---HHHhcccCcc
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKAS-EKPFLWVVKENE-NKLPVEF---VNSVGETGLVVRWCNQ---FEVLAHQAVG 342 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~~-~~~~v~~~~~~~-~~~~~~~---~~~~~~~v~v~~~~p~---~~lL~~~~~~ 342 (459)
.+++..|+... ...+..+++++... +.+++++..... ..+..-. .....+||.+.+|+|+ ..+++.+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi- 100 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG- 100 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE-
Confidence 45667787653 23466677777776 556666543322 2221111 1124579999999997 478888888
Q ss_pred ceec---cCch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHH
Q 012645 343 CFIT---HCGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKI 418 (459)
Q Consensus 343 ~~I~---HGG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 418 (459)
+|. +.|+ .++.||+++|+|+|+... ..+...++.. +.|..+ . .+.+++.++|.++++|++ .+
T Consensus 101 -~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~--~~ 166 (177)
T 2f9f_A 101 -LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPD--KF 166 (177)
T ss_dssp -EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTT--TT
T ss_pred -EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHH--HH
Confidence 775 3344 599999999999998753 4555556666 678777 3 478999999999998872 22
Q ss_pred HHHHHHHH
Q 012645 419 KRNVSKWR 426 (459)
Q Consensus 419 ~~~a~~l~ 426 (459)
++++++.+
T Consensus 167 ~~~~~~~a 174 (177)
T 2f9f_A 167 KKDCFRRA 174 (177)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.19 E-value=0.00012 Score=70.20 Aligned_cols=98 Identities=16% Similarity=0.211 Sum_probs=69.8
Q ss_pred CceEEeeecHH-HHhcccCccceecc-----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCc
Q 012645 323 TGLVVRWCNQF-EVLAHQAVGCFITH-----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGI 396 (459)
Q Consensus 323 ~v~v~~~~p~~-~lL~~~~~~~~I~H-----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 396 (459)
++++.++.... .+++.+++ ++.- +|..++.||+++|+|+|+-|...+.......+.+. |.+...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~------- 330 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV------- 330 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-------
Confidence 45665655444 78877776 6541 24478999999999999877766666666666667 766443
Q ss_pred ccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHH
Q 012645 397 VTGEELNKCVNEVMDGERSQKIKRNVSKWREFAK 430 (459)
Q Consensus 397 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 430 (459)
-+++.|.+++.++++|...+.+.+++++..+.-.
T Consensus 331 ~d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 331 KNETELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp CSHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 2578999999999987224578888888776543
No 48
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.99 E-value=0.0013 Score=66.04 Aligned_cols=136 Identities=11% Similarity=0.058 Sum_probs=76.1
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCC--CCCchhhhhhcCCCceEEeeecHH---HHhcccCcc
Q 012645 269 KSVIYVSFGSMAD-IAANQVDEIARGLKASEKPFLWVVKENE--NKLPVEFVNSVGETGLVVRWCNQF---EVLAHQAVG 342 (459)
Q Consensus 269 ~~~V~vs~Gs~~~-~~~~~~~~i~~a~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~v~v~~~~p~~---~lL~~~~~~ 342 (459)
+.++++..|.... -..+.+...+..+.+.+.+++++..+.. ...-.......+.++.+....+.. .+++.+++
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~- 404 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV- 404 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE-
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe-
Confidence 4467777888753 2333333333334445666666544321 001111223456788888777654 46777777
Q ss_pred ceecc---Cch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC-C----CcccHHHHHHHHHHHhc
Q 012645 343 CFITH---CGW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR-A----GIVTGEELNKCVNEVMD 411 (459)
Q Consensus 343 ~~I~H---GG~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~-~----~~~~~~~l~~~i~~ll~ 411 (459)
||.- =|. .+++||+++|+|+|+.... .....|..- .-|....... + ...+++.|.++|++++.
T Consensus 405 -~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 -LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp -EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred -eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 7753 233 4889999999999986542 333333333 3343222110 0 03567889999988775
No 49
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.79 E-value=0.0013 Score=63.83 Aligned_cols=80 Identities=14% Similarity=0.054 Sum_probs=56.2
Q ss_pred CCCceEEeeecHH---HHhcccCccceeccC---ch-hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC
Q 012645 321 GETGLVVRWCNQF---EVLAHQAVGCFITHC---GW-NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR 393 (459)
Q Consensus 321 ~~~v~v~~~~p~~---~lL~~~~~~~~I~HG---G~-gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 393 (459)
.++|.+.+++|+. .+++.+++ ||.-. |. .++.||+++|+|+|+ -..+ ....++.- ..|..++
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~--- 362 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLE--- 362 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEES---
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeC---
Confidence 4678889999866 57777777 76421 34 467999999999997 2221 11223333 4576665
Q ss_pred CCcccHHHHHHHHHHHhcCh
Q 012645 394 AGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 394 ~~~~~~~~l~~~i~~ll~~~ 413 (459)
.-+++.|.++|.++++|+
T Consensus 363 --~~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 363 --QLNPENIAETLVELCMSF 380 (413)
T ss_dssp --SCSHHHHHHHHHHHHHHT
T ss_pred --CCCHHHHHHHHHHHHcCH
Confidence 467899999999999987
No 50
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.77 E-value=0.0014 Score=61.90 Aligned_cols=102 Identities=10% Similarity=-0.001 Sum_probs=69.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCc-eEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTV-GVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
|||+++.....||+.=..++.++|+++ +.+|++++.+.+.+.++. +.+ +++.++.. . ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--~-----------~~~--- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--H-----------GAL--- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-----------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--c-----------ccc---
Confidence 799999999999999999999999987 999999999988887766 445 34544310 0 000
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEE
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
....+..+.+.++.. ++|++|.=....-...++...|+|...
T Consensus 65 --~~~~~~~l~~~l~~~--~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 --EIGERRKLGHSLREK--RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --CHHHHHHHHHHTTTT--TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred --chHHHHHHHHHHHhc--CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 012234556666554 899998322223455677788999743
No 51
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.72 E-value=0.00013 Score=60.91 Aligned_cols=139 Identities=12% Similarity=0.188 Sum_probs=81.4
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhCC----CcEEEEEeCCCCCCchhhh---hhcCCCceEEeeecHH---HHhccc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKASE----KPFLWVVKENENKLPVEFV---NSVGETGLVVRWCNQF---EVLAHQ 339 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~----~~~v~~~~~~~~~~~~~~~---~~~~~~v~v~~~~p~~---~lL~~~ 339 (459)
+++++..|+... ......+++++..+. .+++++ +. +...+.+. ...+-++++ +|+|+. .+++.+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~-G~--g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLK-GK--GPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEE-CC--STTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEE-eC--CccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhC
Confidence 477888888753 234556677776653 233333 32 21222222 223347788 999865 578777
Q ss_pred Cccceec----cCchhhHHHhhhcCC-eeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChh
Q 012645 340 AVGCFIT----HCGWNSILEGLSLGV-AVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGER 414 (459)
Q Consensus 340 ~~~~~I~----HGG~gs~~eal~~Gv-P~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 414 (459)
++ +|. -|...++.||+++|+ |+|+..... .....+... +. .+. .-+.+++.++|.++++|++
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~-----~~~~~~l~~~i~~l~~~~~ 142 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFE-----PNNAKDLSAKIDWWLENKL 142 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EEC-----TTCHHHHHHHHHHHHHCHH
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEc-----CCCHHHHHHHHHHHHhCHH
Confidence 77 775 344469999999996 999933211 111111222 32 233 4689999999999999873
Q ss_pred -hHHHHHHHHHHHH
Q 012645 415 -SQKIKRNVSKWRE 427 (459)
Q Consensus 415 -~~~~~~~a~~l~~ 427 (459)
.+.+.+++++..+
T Consensus 143 ~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 143 ERERMQNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 2344555554443
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.72 E-value=0.0041 Score=58.78 Aligned_cols=105 Identities=9% Similarity=0.006 Sum_probs=75.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCce-EEEcCCCCCCCCCCCCCCHHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTVG-VEPISDGFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 80 (459)
...+|||++...+.||+.-+.++.++|+++ +.+|++++.+.+.+.++. ++++ ++.++.. .....+.
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~----------~~~~~~~ 75 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKK----------GRHNSIS 75 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCS----------SHHHHHH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcc----------cccccHH
Confidence 456899999999999999999999999987 899999999999998877 5675 5666421 1111111
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCc-cEEEeCCCchhHHHHHHHcCCceEE
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPV-NCIVYDSLLTWALDVARQFGIYGAA 129 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~-Dlvi~D~~~~~~~~~a~~lgiP~v~ 129 (459)
.+..++++++.. ++ |++|.=....-...++...|+|...
T Consensus 76 --------~~~~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 --------GLNEVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --------HHHHHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --------HHHHHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 122344444433 89 9999654445566778888999654
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.61 E-value=0.0012 Score=68.81 Aligned_cols=137 Identities=14% Similarity=0.129 Sum_probs=95.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC---CCCchhhhhh--cCCCceEEeeecHHHHh---ccc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE---NKLPVEFVNS--VGETGLVVRWCNQFEVL---AHQ 339 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~---~~~~~~~~~~--~~~~v~v~~~~p~~~lL---~~~ 339 (459)
+..+||.||-+..+..++.+..-.+.+++.+.-.+|...... ..+...+... .++++.+.+..|..+.| ..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~ 600 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLA 600 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCC
Confidence 456999999999999999999999999998888888887643 1111111111 24678888888866544 445
Q ss_pred Cccceec---cCchhhHHHhhhcCCeeeccccc-cchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 340 AVGCFIT---HCGWNSILEGLSLGVAVVAVPQF-SDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 340 ~~~~~I~---HGG~gs~~eal~~GvP~li~P~~-~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
|+ ++- .+|.+|++|||+.|||+|.++-. .=...-+..+..+ |+...+- .|.++-.+.-.++-+|+
T Consensus 601 Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~ia------~~~~~Y~~~a~~la~d~ 669 (723)
T 4gyw_A 601 DV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELIA------KNRQEYEDIAVKLGTDL 669 (723)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGBC------SSHHHHHHHHHHHHHCH
T ss_pred eE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCccccc------CCHHHHHHHHHHHhcCH
Confidence 55 654 88999999999999999999942 2333455666777 8876554 34555555555677776
No 54
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.60 E-value=0.00099 Score=57.31 Aligned_cols=78 Identities=17% Similarity=0.117 Sum_probs=59.2
Q ss_pred CceE-EeeecHH---HHhcccCccceecc----CchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCC
Q 012645 323 TGLV-VRWCNQF---EVLAHQAVGCFITH----CGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRA 394 (459)
Q Consensus 323 ~v~v-~~~~p~~---~lL~~~~~~~~I~H----GG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 394 (459)
+|.+ .+++++. .+++.+++ +|.- |...++.||+++|+|+|+... ......+ .. +.|..++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEec----
Confidence 8999 8999854 67877777 6642 234688999999999988754 3444445 55 6676665
Q ss_pred CcccHHHHHHHHHHHhc-Ch
Q 012645 395 GIVTGEELNKCVNEVMD-GE 413 (459)
Q Consensus 395 ~~~~~~~l~~~i~~ll~-~~ 413 (459)
.-+.+.+.++|.++++ |+
T Consensus 164 -~~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 164 -AGDPGELANAILKALELSR 182 (200)
T ss_dssp -TTCHHHHHHHHHHHHHCCH
T ss_pred -CCCHHHHHHHHHHHHhcCH
Confidence 4588999999999999 87
No 55
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.58 E-value=0.00079 Score=67.57 Aligned_cols=135 Identities=8% Similarity=0.083 Sum_probs=91.8
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE--eCCCCCCchhhh-----hhcCCCceEEeeecHHHHh---ccc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVV--KENENKLPVEFV-----NSVGETGLVVRWCNQFEVL---AHQ 339 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~--~~~~~~~~~~~~-----~~~~~~v~v~~~~p~~~lL---~~~ 339 (459)
.++|.+|++..+..++.+....+.+++.+..++|.. +... ....... ..+.+++.+.+.+|+.+.+ ..+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~-g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~a 519 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN-GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNC 519 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC-GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTC
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc-hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcC
Confidence 589999999888899999998888888777777643 3211 1111111 1234678888888876544 566
Q ss_pred Ccccee---ccCchhhHHHhhhcCCeeecccccc-chhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 340 AVGCFI---THCGWNSILEGLSLGVAVVAVPQFS-DQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 340 ~~~~~I---~HGG~gs~~eal~~GvP~li~P~~~-DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
|+ ++ ..+|.+|++|||+.|||+|..+-.. --..-+..+... |+...+- .-+.++..+...++.+|+
T Consensus 520 DI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LI-----A~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 520 DM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLI-----ANTVDEYVERAVRLAENH 589 (631)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGE-----ESSHHHHHHHHHHHHHCH
T ss_pred cE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCccee-----cCCHHHHHHHHHHHhCCH
Confidence 66 54 3488899999999999999987432 122223445566 7765322 246778888888899997
No 56
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.96 E-value=0.0021 Score=60.43 Aligned_cols=146 Identities=15% Similarity=0.101 Sum_probs=94.0
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHH---hcccCccceecc
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEV---LAHQAVGCFITH 347 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~l---L~~~~~~~~I~H 347 (459)
.+++-.|+... ...+. .+ ..+.+++++..+.+. ..+ ||.+.+|+|+.++ |+.++...+.+-
T Consensus 179 ~~i~yaG~l~k--~~~L~----~l-~~~~~f~ivG~G~~~--------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~ 242 (339)
T 3rhz_A 179 REIHFPGNPER--FSFVK----EW-KYDIPLKVYTWQNVE--------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMD 242 (339)
T ss_dssp EEEEECSCTTT--CGGGG----GC-CCSSCEEEEESCCCC--------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCC
T ss_pred cEEEEeCCcch--hhHHH----hC-CCCCeEEEEeCCccc--------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECC
Confidence 56677788764 12221 11 245666655443211 134 9999999999865 434444444433
Q ss_pred Cch---------hhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcChhhHHH
Q 012645 348 CGW---------NSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKI 418 (459)
Q Consensus 348 GG~---------gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 418 (459)
+.. +-+.|+|++|+|+|+.+ ...++..+++. |+|..++ +.+++.+++.++.. .+.+++
T Consensus 243 ~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~-------~~~e~~~~i~~l~~-~~~~~m 309 (339)
T 3rhz_A 243 DKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK-------DVEEAIMKVKNVNE-DEYIEL 309 (339)
T ss_dssp GGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES-------SHHHHHHHHHHCCH-HHHHHH
T ss_pred CchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC-------CHHHHHHHHHHhCH-HHHHHH
Confidence 333 34789999999999754 56788889999 9998775 25788888887643 345689
Q ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q 012645 419 KRNVSKWREFAKKAVSAGGSSDKNIDEFVVR 449 (459)
Q Consensus 419 ~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~ 449 (459)
++|+++.++++++ |.-...++.+.+..
T Consensus 310 ~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 310 VKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp HHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 9999999888875 33344445444443
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.80 E-value=0.016 Score=54.04 Aligned_cols=53 Identities=15% Similarity=0.136 Sum_probs=45.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCccccccCC-CCc-eEEEc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYTVKSIHA-TTV-GVEPI 60 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~~~~~~~-~g~-~~~~~ 60 (459)
||||++...+.||+.=..++.++|+++ +.+|++++.+.+.+.++. +++ +++.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~ 57 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPV 57 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTSTTEEEEEEE
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcCCCCCEEEEc
Confidence 799999999999999999999999987 899999999998887765 455 33444
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=94.86 E-value=0.036 Score=49.08 Aligned_cols=46 Identities=13% Similarity=0.089 Sum_probs=34.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
+++||||+.---+. |.--+..|+++|++ +|+|+++.+...++-...
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~ 54 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASN 54 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCccc
Confidence 56699988876555 55668889999976 899999999887765443
No 59
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=93.24 E-value=0.61 Score=41.05 Aligned_cols=109 Identities=9% Similarity=0.056 Sum_probs=64.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.---+. |.--+..|+++|++.| +|+++.+...++-... ..+.+..+...+. ....+....-...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~---~~v~GTPaDCV~l- 75 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY---TVIDGTPADCVHL- 75 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE---EETTCCHHHHHHH-
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe---EEECCCHHHHHHH-
Confidence 88888776555 5566889999999988 9999999887765544 2344444432210 0111222211111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeC----------CCch---hHHHHHHHcCCceEEEccc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYD----------SLLT---WALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D----------~~~~---~~~~~a~~lgiP~v~~~~~ 133 (459)
.+..++. ..+||+||+. .++. +|+.-|..+|||.|.+|..
T Consensus 76 ------al~~l~~-----~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 76 ------GYRVILE-----EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ------HHHTTTT-----TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ------HHHHhcC-----CCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 1122221 1279999963 2333 3555666889999999863
No 60
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=92.02 E-value=1.1 Score=39.38 Aligned_cols=108 Identities=14% Similarity=0.109 Sum_probs=63.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCC--C-CCCCCCCCHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFD--E-GGFKQAPSVKAYL 79 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~--~-~~~~~~~~~~~~~ 79 (459)
||||+.---+. |.--+..|+++|++.| +|+++.+...++-+.. ..+.+..++...+ . ......+....-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 67777765554 4455889999999888 8999999887766544 2566666643210 0 0001112222111
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeC----------CCc---hhHHHHHHHcCCceEEEcc
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYD----------SLL---TWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D----------~~~---~~~~~~a~~lgiP~v~~~~ 132 (459)
+. .+. + ..+||+||+. .++ .+|+.-|..+|||.|.+|.
T Consensus 79 ~l-------al~-----l---~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 AL-------GLH-----L---FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HH-------HHH-----H---SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HH-------HHc-----C---CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 11 111 2 1389999963 233 3355566689999999975
No 61
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=91.27 E-value=0.87 Score=40.06 Aligned_cols=110 Identities=11% Similarity=0.075 Sum_probs=62.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.---+. |.--+..|+++|++.| +|+++.+...++-+.. ..+.+..++..-........+....-.+.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~l- 77 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKL- 77 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHH-
Confidence 67777765454 4455889999999888 8999999887765544 24555554321000000111222211111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeC----------CCc---hhHHHHHHHcCCceEEEcc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYD----------SLL---TWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D----------~~~---~~~~~~a~~lgiP~v~~~~ 132 (459)
.+..++ . .+||+||+. .++ .+|+.-|..+|||.|.+|.
T Consensus 78 ------al~~l~----~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 78 ------AYNVVM----D--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ------HHHTTS----T--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ------HHHhhc----c--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 112222 1 289999963 233 3355566688999999975
No 62
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=89.10 E-value=2.1 Score=38.32 Aligned_cols=109 Identities=10% Similarity=-0.029 Sum_probs=63.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
||||+.---+. +.--+..|+++|++.| +|+++.+...++-+.. ..+.+..++.. ........+....-.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~-~~~~~~v~GTPaDCV--- 74 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLC-GFRAIATSGTPSDTV--- 74 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECS-SSEEEEESSCHHHHH---
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccC-CCceEEECCcHHHHH---
Confidence 67777765554 4455889999999888 9999999887765544 24444444321 000001112222111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeC-----------CCc---hhHHHHHHHcCCceEEEccc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYD-----------SLL---TWALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D-----------~~~---~~~~~~a~~lgiP~v~~~~~ 133 (459)
.-.+..+ . .+||+||+. .++ .+|+.-|..+|||.|.+|..
T Consensus 75 ----~lal~~l-----~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 75 ----YLATFGL-----G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ----HHHHHHH-----T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ----HHHHhcC-----C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 1112222 1 289999963 222 33555566889999999863
No 63
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=88.84 E-value=2.5 Score=35.74 Aligned_cols=98 Identities=14% Similarity=0.113 Sum_probs=64.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc------ccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT------VKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (459)
+-.|++++..+.|-..-.+.+|-+.+.+|++|.|+..-.. ...++.-++++.....++.. .......
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L~v~~~~~g~gf~~----~~~~~~~--- 100 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTW----ETQNREA--- 100 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGTCEEEECCTTCCC----CGGGHHH---
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhCCcEEEEccccccc----CCCCcHH---
Confidence 3468899988999999999999999999999999965432 12233336888877764432 1111111
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCccEEEeCCCch
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLT 114 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~ 114 (459)
-.......+....+.+.+ .++|+||.|.+..
T Consensus 101 -~~~~a~~~l~~a~~~l~~--~~yDlvILDEi~~ 131 (196)
T 1g5t_A 101 -DTAACMAVWQHGKRMLAD--PLLDMVVLDELTY 131 (196)
T ss_dssp -HHHHHHHHHHHHHHHTTC--TTCSEEEEETHHH
T ss_pred -HHHHHHHHHHHHHHHHhc--CCCCEEEEeCCCc
Confidence 112224455555555543 3899999998754
No 64
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=88.28 E-value=0.66 Score=36.85 Aligned_cols=40 Identities=5% Similarity=-0.039 Sum_probs=36.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++.||++.+.++.+|-....-++..|..+|++|++++..
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4567999999999999999999999999999999988764
No 65
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=87.81 E-value=1.6 Score=38.62 Aligned_cols=44 Identities=11% Similarity=0.115 Sum_probs=33.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
.||||+.---+. |.--+..|+++|++.| +|+++.+...++-+..
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ 44 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASN 44 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccC
Confidence 388888776555 5556888999998876 9999999887765544
No 66
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=87.11 E-value=1.6 Score=38.52 Aligned_cols=109 Identities=9% Similarity=0.060 Sum_probs=60.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-----CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-----TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
+|||+.---+. +.--+..|+++|.+.| +|+++.+...++-+.. ..+.+........ ....+....-.
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~~---~~v~GTPaDCV--- 73 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY---TVIDGTPADCV--- 73 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE---EETTCCHHHHH---
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccce---eecCCChHHHH---
Confidence 36666654443 4445788999999998 5999998877765443 2344444321100 00111211111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEe----------CCCc---hhHHHHHHHcCCceEEEccc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVY----------DSLL---TWALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~----------D~~~---~~~~~~a~~lgiP~v~~~~~ 133 (459)
.-.+..++. + .+||+||+ |.++ .+|+.-|..+|||.|.+|..
T Consensus 74 ----~lal~~~l~---~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 74 ----HLGYRVILE---E--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ----HHHHHTTTT---T--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ----hhhhhhhcC---C--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 111112221 1 28999997 3333 34566667889999999853
No 67
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=85.85 E-value=5.7 Score=32.87 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=69.6
Q ss_pred hhhhhhhccCCCCcEEEEEeCC-cccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHH-H
Q 012645 257 DQCMRWLATKPEKSVIYVSFGS-MADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQF-E 334 (459)
Q Consensus 257 ~~l~~~l~~~~~~~~V~vs~Gs-~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~-~ 334 (459)
.++-++|...+ ...|+-|. .. .+....++....+-+++-+++......+... -....+.+..+.. .
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~~~~~~~~~----~~~~i~~~~~~~Rk~ 102 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGPDTSEISDA----VDIPIVTGLGSARDN 102 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC-----CCTT----CSEEEECCCCSSSCC
T ss_pred HHHHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCchhhhhhccC----CceeEEcCCHHHHHH
Confidence 34666776653 55555555 43 4556666666666677766543211111110 0122334555655 3
Q ss_pred Hhc-ccCccceeccCchhhHHH---hhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHh
Q 012645 335 VLA-HQAVGCFITHCGWNSILE---GLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVM 410 (459)
Q Consensus 335 lL~-~~~~~~~I~HGG~gs~~e---al~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll 410 (459)
++. .++ ..++--||+||..| ++.+++|++++|.+. .....+... ....... .-+++++.+.+.+.+
T Consensus 103 ~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~-----~~~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 103 INALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHV-----AADVAGAIAAVKQLL 172 (176)
T ss_dssp CCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEE-----ESSHHHHHHHHHHHH
T ss_pred HHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEE-----cCCHHHHHHHHHHHH
Confidence 332 344 44666799998665 567999999999832 111122222 2222222 356777777776665
Q ss_pred c
Q 012645 411 D 411 (459)
Q Consensus 411 ~ 411 (459)
.
T Consensus 173 ~ 173 (176)
T 2iz6_A 173 A 173 (176)
T ss_dssp H
T ss_pred H
Confidence 4
No 68
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=85.09 E-value=3.4 Score=37.94 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++|||+|+..+.++ ++.-++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcC
Confidence 568999999876443 34567788889998877763
No 69
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=84.38 E-value=1.5 Score=37.55 Aligned_cols=47 Identities=9% Similarity=0.087 Sum_probs=39.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT 53 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~ 53 (459)
++++||++...|+.+-+. ...+.+.|+++| +|.++.++.-..++...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 556899999999988776 899999999999 99999999887776553
No 70
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=84.27 E-value=5 Score=33.70 Aligned_cols=78 Identities=12% Similarity=0.062 Sum_probs=51.5
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecCcccc---cc--CCCCceEEEcCCCCCCCCCCCCCCHHHHHH
Q 012645 8 VHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTHYTVK---SI--HATTVGVEPISDGFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 8 ~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~---~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (459)
||++.++. |+-|=..=...||..|+++|++|.++-.+.... .. ...++.+.+.+.
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~~------------------ 62 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAAS------------------ 62 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTTSCCSSEEEECCS------------------
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhcCCCCCcEEecCc------------------
Confidence 56666654 688889999999999999999999997653221 11 112444443321
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL 113 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~ 113 (459)
..+.++++.+.. ++|+||.|.-.
T Consensus 63 -------~~l~~~l~~l~~---~yD~viiD~~~ 85 (206)
T 4dzz_A 63 -------EKDVYGIRKDLA---DYDFAIVDGAG 85 (206)
T ss_dssp -------HHHHHTHHHHTT---TSSEEEEECCS
T ss_pred -------HHHHHHHHHhcC---CCCEEEEECCC
Confidence 344555565542 68999999653
No 71
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=83.87 E-value=2.7 Score=38.50 Aligned_cols=97 Identities=8% Similarity=-0.021 Sum_probs=54.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc--------------cccCCCCceEEEcCCCCCCCCCCC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV--------------KSIHATTVGVEPISDGFDEGGFKQ 71 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~ 71 (459)
++|||+|+..+.++ ....++|.+.||+|..+.+...+ +.+.+.|+.+.. |..+
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIpv~~-~~~~------- 68 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQ-PVSL------- 68 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEEC-CSCS-------
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCcEEe-cCCC-------
Confidence 57999999876543 44457777789999877664221 112224665542 1110
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 72 APSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
. .+.+.+.++.+ +||+||+=.+. .....+-+.....++-+.++.
T Consensus 69 -~-------------~~~~~~~l~~~-----~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 69 -R-------------PQENQQLVAEL-----QADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp -C-------------SHHHHHHHHHT-----TCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred -C-------------CHHHHHHHHhc-----CCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 0 12233444554 89999875543 334444455556677776654
No 72
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=83.09 E-value=6.2 Score=38.30 Aligned_cols=88 Identities=15% Similarity=0.113 Sum_probs=55.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhc
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVG 86 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (459)
..|++++. +-.-.+.+++.|.+.|-+|+.+++....+..++... .. . ...+.
T Consensus 313 Gkrv~i~~-----~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~---------~~-v--~~~D~----------- 364 (458)
T 3pdi_B 313 SARTAIAA-----DPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPL---------PS-V--RVGDL----------- 364 (458)
T ss_dssp TCEEEEEC-----CHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTS---------SC-E--EESHH-----------
T ss_pred CCEEEEEC-----CcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCcc---------Cc-E--EeCCH-----------
Confidence 35777753 334567899999999999998887654332221110 00 0 00111
Q ss_pred hHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEc
Q 012645 87 SRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMM 131 (459)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~ 131 (459)
..+.+++++. +||++|.+.. ...+|+++|||++.++
T Consensus 365 -~~le~~i~~~-----~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 365 -EDLEHAARAG-----QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp -HHHHHHHHHH-----TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred -HHHHHHHHhc-----CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 1244555554 8999999854 6778999999999864
No 73
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=82.81 E-value=8 Score=32.60 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=62.8
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEEecCccccccCC-CCceEEEcCCC-------------CCCC-----CCCCCCCHHHHH
Q 012645 19 GHINPLLQFAKRLASKRVKATLATTHYTVKSIHA-TTVGVEPISDG-------------FDEG-----GFKQAPSVKAYL 79 (459)
Q Consensus 19 GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~-------------~~~~-----~~~~~~~~~~~~ 79 (459)
|.+.-.+.+|+.+ +.|.+|.+.-+. ....+++ .++..+.++-. .... ......... .+
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRGg-ta~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~-~~ 112 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRGA-TSDYIKKSVSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKH-EI 112 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEHH-HHHHHHTTCSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHH-HH
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECCh-HHHHHHHhCCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHH-HH
Confidence 5567777888888 888886665544 3333333 34555555410 0000 001112222 22
Q ss_pred HHHHHh--------chHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccch
Q 012645 80 ESFKTV--------GSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 80 ~~~~~~--------~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~~ 134 (459)
..+... ..+.+...++++.+. +.|+||.| ..+..+|+++|+|.+.+.+..
T Consensus 113 ~~ll~~~i~~~~~~~~~e~~~~i~~l~~~--G~~vvVG~---~~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 113 EAMLGVKIKEFLFSSEDEITTLISKVKTE--NIKIVVSG---KTVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp HHHHTCEEEEEEECSGGGHHHHHHHHHHT--TCCEEEEC---HHHHHHHHHTTCEEEECCCCH
T ss_pred HHHhCCceEEEEeCCHHHHHHHHHHHHHC--CCeEEECC---HHHHHHHHHcCCcEEEEecCH
Confidence 222221 134556677777666 89999999 447899999999999988754
No 74
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=82.80 E-value=1.9 Score=36.70 Aligned_cols=47 Identities=19% Similarity=-0.006 Sum_probs=38.6
Q ss_pred CCCcEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 5 RERVHVLVLTYPAQGHIN-PLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~-p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
++.+||++.-.|+ +..+ -.+.+.+.|+++|++|.++.++.-..++..
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~ 52 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDTK 52 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTCC
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHHH
Confidence 4567898888888 4555 789999999999999999999987776653
No 75
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=82.63 E-value=2.7 Score=38.78 Aligned_cols=103 Identities=7% Similarity=-0.136 Sum_probs=54.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec-Ccc-------ccccCCCCceEEEcCCCCCCCCCCCCCCHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT-HYT-------VKSIHATTVGVEPISDGFDEGGFKQAPSVK 76 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~-~~~-------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (459)
|.+|||+|+. --+-...+.++|.+.||+|..+.+ ++. ++.+++.|+.+...+. +.. .
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv~~~~~-~~~------~--- 84 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSR-WRA------K--- 84 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSC-CEE------T---
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCEEecCc-ccc------c---
Confidence 4569999993 123333567889889999887765 221 1122224666655431 000 0
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
....+.+.+.++.+ ++|++|+=.+. .....+-+.....++-+.++.
T Consensus 85 -------~~~~~~~~~~l~~~-----~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 85 -------GQALPDVVAKYQAL-----GAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp -------TEECHHHHHHHHTT-----CCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred -------ccccHHHHHHHHhc-----CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 01112223334443 89999976553 223344445555677766554
No 76
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=81.35 E-value=1.8 Score=44.06 Aligned_cols=47 Identities=13% Similarity=0.118 Sum_probs=33.8
Q ss_pred CCCceEE---eeecH---------HHHhcccCccceecc---Cch-hhHHHhhhcCCeeeccccc
Q 012645 321 GETGLVV---RWCNQ---------FEVLAHQAVGCFITH---CGW-NSILEGLSLGVAVVAVPQF 369 (459)
Q Consensus 321 ~~~v~v~---~~~p~---------~~lL~~~~~~~~I~H---GG~-gs~~eal~~GvP~li~P~~ 369 (459)
.++|+++ .|++. .++++.+++ ||.- =|+ .+.+||+++|+|+|+.-..
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 3566665 67754 468888888 7754 344 5899999999999986543
No 77
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=80.32 E-value=2.7 Score=34.77 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=37.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
+||++.-.|+.|=+. ...+.+.|+++|++|.++.++.-..++..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 688888888877665 89999999999999999999988777654
No 78
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=80.31 E-value=8.8 Score=33.78 Aligned_cols=37 Identities=14% Similarity=0.176 Sum_probs=30.8
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 6 ERVHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 6 ~~~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
++||.+|++. ..-|=..-.+.|+++|+++|++|.++=
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 5677777775 367788889999999999999999975
No 79
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=80.23 E-value=8.6 Score=33.32 Aligned_cols=105 Identities=11% Similarity=0.061 Sum_probs=61.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCc-c---ccccCCCCceEEEcCC-CCCCCCCCCCCCHHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHY-T---VKSIHATTVGVEPISD-GFDEGGFKQAPSVKAY 78 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~-~---~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (459)
++|||+|+..|+.. -+.++.++|.+. +++|..+.+.. . .+.+++.|+.+..++. .+. +-
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~--------~r--- 86 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYP--------SR--- 86 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSS--------SH---
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECccccc--------ch---
Confidence 34799999877743 256677777766 68887666542 1 2334557888886642 111 00
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 79 LESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
....+.+.+.++.+ +||+||.=.+. .....+-+.+...++-+.++.
T Consensus 87 -----~~~~~~~~~~l~~~-----~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSL 133 (229)
T 3auf_A 87 -----TAFDAALAERLQAY-----GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSL 133 (229)
T ss_dssp -----HHHHHHHHHHHHHT-----TCSEEEESSCCSCCCHHHHHHSTTCEEEEESSC
T ss_pred -----hhccHHHHHHHHhc-----CCCEEEEcChhHhCCHHHHhhccCCEEEEccCc
Confidence 11122333444554 89999976553 334455566666777776644
No 80
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=80.02 E-value=1.9 Score=37.99 Aligned_cols=44 Identities=11% Similarity=-0.022 Sum_probs=37.6
Q ss_pred CCCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEecCcccc
Q 012645 5 RERVHVLVLTYP---AQGHINPLLQFAKRLASKRVKATLATTHYTVK 48 (459)
Q Consensus 5 ~~~~kil~~~~~---~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~ 48 (459)
|..||.+|+|.| +.|-=.-...|+..|++||++|+..--+.+..
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 678999999987 67777789999999999999999998776654
No 81
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=79.51 E-value=1.5 Score=37.49 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=37.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIH 51 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~ 51 (459)
++||++.-.|+.|-+. ...|.+.|+++|++|.++.++.-..++.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 4789888888888777 8999999999999999999987776654
No 82
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=79.44 E-value=8.7 Score=32.95 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=59.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEecCc-c---ccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRV--KATLATTHY-T---VKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLES 81 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh--~V~~~~~~~-~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (459)
|||+|+..|+.. -+.++.++|.+.+| +|..+.+.. . .+.+++.|+.+..++.. . ..+
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~----~---~~~------- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRK----E---FPS------- 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG----G---SSS-------
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc----c---ccc-------
Confidence 689988777653 35667778888888 776665442 1 23344468887766421 0 001
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
+....+.+.+.++++ ++|+||+=.+. .....+-+.....++-+.++.
T Consensus 65 -r~~~~~~~~~~l~~~-----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 112 (216)
T 2ywr_A 65 -KKEFEERMALELKKK-----GVELVVLAGFMRILSHNFLKYFPNKVINIHPSL 112 (216)
T ss_dssp -HHHHHHHHHHHHHHT-----TCCEEEESSCCSCCCHHHHTTSTTCEEEEESSC
T ss_pred -hhhhhHHHHHHHHhc-----CCCEEEEeCchhhCCHHHHhhccCCeEEEcCCc
Confidence 111122333444554 89999976553 334444555656777776644
No 83
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=77.73 E-value=15 Score=35.86 Aligned_cols=111 Identities=11% Similarity=0.038 Sum_probs=72.0
Q ss_pred CceEEeeecHH---HHhcccCccceec---cCchhh-HHHhhhcC---CeeeccccccchhhHHHHHHHhhhceEEeeec
Q 012645 323 TGLVVRWCNQF---EVLAHQAVGCFIT---HCGWNS-ILEGLSLG---VAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKN 392 (459)
Q Consensus 323 ~v~v~~~~p~~---~lL~~~~~~~~I~---HGG~gs-~~eal~~G---vP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~ 392 (459)
.|++...+|+. .+++.+++ ||. .=|+|. ..|++++| .|.|+--+.+ .+..+.. -|..++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVn-- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVN-- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEEC--
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEEC--
Confidence 57777888765 56667777 553 458874 58999996 6665544332 2222211 266666
Q ss_pred CCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 393 RAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 393 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
-.+.+.++++|.++|+++.. +-+++.+++.+.+.+ .+...-++.++++|...
T Consensus 422 ---P~D~~~lA~AI~~aL~m~~~-er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 422 ---PFDLVEQAEAISAALAAGPR-QRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp ---TTBHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 46899999999999987521 344455555555443 66677788888888643
No 84
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=77.05 E-value=12 Score=32.87 Aligned_cols=32 Identities=22% Similarity=0.118 Sum_probs=24.3
Q ss_pred CCccEEE-eCCCc-hhHHHHHHHcCCceEEEccc
Q 012645 102 SPVNCIV-YDSLL-TWALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 102 ~~~Dlvi-~D~~~-~~~~~~a~~lgiP~v~~~~~ 133 (459)
..||+|| .|+.. .-+..=|.++|||+|.+.-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 4789886 67654 34777788999999998654
No 85
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=76.25 E-value=2.2 Score=34.85 Aligned_cols=55 Identities=20% Similarity=0.156 Sum_probs=42.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc----ccccCCCCceEEEc
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT----VKSIHATTVGVEPI 60 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~----~~~~~~~g~~~~~~ 60 (459)
++.||++.+.++.+|-....-++..|..+|++|+++....- .+.+.+.+.+.+-+
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~l 75 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGV 75 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEE
Confidence 46799999999999999999999999999999999875422 22233345555544
No 86
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=76.05 E-value=2.5 Score=38.19 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
||||+. |+.|.+-. .|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG~--~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEECC
Confidence 787655 56677775 4689999999999998743
No 87
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=75.95 E-value=4.8 Score=32.29 Aligned_cols=50 Identities=6% Similarity=0.026 Sum_probs=33.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc-cccccC-CCCceEE
Q 012645 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY-TVKSIH-ATTVGVE 58 (459)
Q Consensus 4 ~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~-~~~~~~-~~g~~~~ 58 (459)
..+.++|+++..|..| ..+|+.|.++|++|+++.... ..+.+. ..|..++
T Consensus 16 ~~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~ 67 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTV 67 (155)
T ss_dssp -CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEE
T ss_pred ccCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEE
Confidence 3556899998655444 457889999999999987643 333444 4565543
No 88
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=75.87 E-value=2 Score=36.40 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=36.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCccccccC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTVKSIH 51 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~~~ 51 (459)
|||++.-.|+.|-+. ...+.+.|+++ |++|.++.++.-..++.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 688888888887766 89999999999 99999999987766654
No 89
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=75.77 E-value=2.3 Score=34.14 Aligned_cols=35 Identities=11% Similarity=0.169 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++.||+++.+ |++. ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 45678988854 5544 67899999999999999874
No 90
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=75.48 E-value=3.2 Score=35.38 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=38.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEecCccccccCCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLAS-KRVKATLATTHYTVKSIHAT 53 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~~~~~ 53 (459)
++++||++...|+.+=+. ...+.+.|++ +|++|.++.++.-..++...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 456789988888888554 6999999999 89999999999888777654
No 91
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=74.50 E-value=16 Score=31.10 Aligned_cols=107 Identities=7% Similarity=0.051 Sum_probs=61.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEecCc--c--ccccCCCCceEEEcCCC-CCCCCCCCCCCHH
Q 012645 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKR--VKATLATTHY--T--VKSIHATTVGVEPISDG-FDEGGFKQAPSVK 76 (459)
Q Consensus 4 ~~~~~kil~~~~~~~GH~~p~~~la~~L~~~G--h~V~~~~~~~--~--~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~ 76 (459)
.|.|+||+++..|+.+- +.+|.+++.+.+ ++|..+.+.. . .+.+++.|+.+..++.. +. +
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~~~--------~-- 70 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKDFA--------S-- 70 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGGSS--------S--
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccccC--------C--
Confidence 37788998888776544 445556665543 7888777632 1 22455578888877521 11 1
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
+....+.+.+.++++ ++|+||.-.+. .....+-+...-.++-+.++.
T Consensus 71 ------r~~~d~~~~~~l~~~-----~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 118 (209)
T 4ds3_A 71 ------KEAHEDAILAALDVL-----KPDIICLAGYMRLLSGRFIAPYEGRILNIHPSL 118 (209)
T ss_dssp ------HHHHHHHHHHHHHHH-----CCSEEEESSCCSCCCHHHHGGGTTCEEEEESSC
T ss_pred ------HHHHHHHHHHHHHhc-----CCCEEEEeccccCcCHHHHhhccCCeEEECCcc
Confidence 011123444555655 89999976553 334455555656677766544
No 92
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=73.58 E-value=4.1 Score=39.42 Aligned_cols=101 Identities=18% Similarity=0.169 Sum_probs=60.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcC--CCCCCCCCCCCCC--HHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPIS--DGFDEGGFKQAPS--VKAYLE 80 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~~ 80 (459)
+++||-+|++. .|=.-++.+|+.|.+.|+++. ++......+++.|+.+..+. .++++......+. ..-.-.
T Consensus 7 ~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~GI~v~~V~~vTgfPEil~GRVKTLHP~ihgG 81 (523)
T 3zzm_A 7 RRPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADTGIPVTPVEQLTGFPEVLDGRVKTLHPRVHAG 81 (523)
T ss_dssp CCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTTTCCCEEHHHHHSCCCCTTTTSSSCSHHHHHH
T ss_pred cccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHcCCceeeccccCCCchhhCCccccCCchhhhh
Confidence 55666666665 345568999999999999875 66678888888999988875 3444443222221 221211
Q ss_pred HHH-HhchHHHHHHHHHhhcCCCCccEEEeCCCc
Q 012645 81 SFK-TVGSRTLAEVILKYKDSESPVNCIVYDSLL 113 (459)
Q Consensus 81 ~~~-~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~ 113 (459)
.+. +...+...++- +..- .+.|+||++..-
T Consensus 82 iLa~r~~~~h~~~l~-~~~i--~~iDlVvvNLYP 112 (523)
T 3zzm_A 82 LLADLRKSEHAAALE-QLGI--EAFELVVVNLYP 112 (523)
T ss_dssp HHCCTTSHHHHHHHH-HHTC--CCCSEEEEECCC
T ss_pred hccCCCCHHHHHHHH-HCCC--CceeEEEEeCCC
Confidence 221 12233444432 2211 378999999443
No 93
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=73.30 E-value=43 Score=30.02 Aligned_cols=106 Identities=8% Similarity=0.057 Sum_probs=63.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecC--c-cccccCCCCceEEEcCCCCCCCCCCCCCCHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTH--Y-TVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYL 79 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~--~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (459)
.+++||+++..+. || -+.+|..+.++. ..+|..+.+. . ..+.+++.|+.+..+|... .+
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~gIp~~~~~~~~--------~~----- 149 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLPVTP--------AT----- 149 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTTSCEEECCCCG--------GG-----
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcCCCEEEEeccC--------cc-----
Confidence 3578998888776 44 344555555432 3677776653 3 4456667899999886321 00
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
+....+.+.+++++. ++|+||.=.+. .....+.+.+.-.++-+.++.
T Consensus 150 ---r~~~~~~~~~~l~~~-----~~Dlivlagym~il~~~~l~~~~~~~iNiHpSl 197 (287)
T 3nrb_A 150 ---KAAQESQIKNIVTQS-----QADLIVLARYMQILSDDLSAFLSGRCINIHHSF 197 (287)
T ss_dssp ---HHHHHHHHHHHHHHH-----TCSEEEESSCCSCCCHHHHHHHTTSEEEEESSC
T ss_pred ---hhhHHHHHHHHHHHh-----CCCEEEhhhhhhhcCHHHHhhccCCeEEECccc
Confidence 111123444555655 89999976554 445556666666777776654
No 94
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=73.07 E-value=2.1 Score=40.39 Aligned_cols=36 Identities=22% Similarity=0.146 Sum_probs=31.7
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+|++++. |+-|-..-...+|..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 57777766 7889999999999999999999999988
No 95
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=72.54 E-value=15 Score=31.61 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=32.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHH------HHHHhCC-CeEEEEecCccc
Q 012645 7 RVHVLVLTYPAQGHINPLLQFA------KRLASKR-VKATLATTHYTV 47 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la------~~L~~~G-h~V~~~~~~~~~ 47 (459)
.++.++++.|+.+.++.++..+ ++|.+.| .+|++.+.....
T Consensus 27 ~~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~ 74 (224)
T 2jzc_A 27 EEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS 74 (224)
T ss_dssp CSCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch
Confidence 3567888989888789987766 8898888 788888876543
No 96
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=72.20 E-value=31 Score=33.97 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
..|++++ |+-.-.+.|++.|.+.|-+|+.+...
T Consensus 364 GKrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALW-----GDPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeC
Confidence 3577776 34455678888888999998888765
No 97
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=71.99 E-value=11 Score=32.52 Aligned_cols=108 Identities=12% Similarity=0.142 Sum_probs=62.1
Q ss_pred cCHHHHHHHHHHHHhC-CCeEEEEecCccccccCC-CCceEEEcCC-------------CCCCC----CCCCCCCHHHHH
Q 012645 19 GHINPLLQFAKRLASK-RVKATLATTHYTVKSIHA-TTVGVEPISD-------------GFDEG----GFKQAPSVKAYL 79 (459)
Q Consensus 19 GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~-------------~~~~~----~~~~~~~~~~~~ 79 (459)
|.+.-.+.+|+.+.+. |.+|.+.-+. ....+++ .++..+.++- .+... .....-.-...+
T Consensus 46 ~~le~av~~a~~~~~~~~~dVIISRGg-ta~~Lr~~~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i 124 (225)
T 2pju_A 46 LGFEKAVTYIRKKLANERCDAIIAAGS-NGAYLKSRLSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAF 124 (225)
T ss_dssp CCHHHHHHHHHHHTTTSCCSEEEEEHH-HHHHHHTTCSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHH
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEeCCh-HHHHHHhhCCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHH
Confidence 5567778888887664 5886655544 3333333 3566665541 00000 000001111222
Q ss_pred HHHHHh--------chHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEcc
Q 012645 80 ESFKTV--------GSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 80 ~~~~~~--------~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~ 132 (459)
..+... ..+.+...++++.+. +.|+||.| ..+..+|+++|+|.+.+.+
T Consensus 125 ~~ll~~~i~~~~~~~~ee~~~~i~~l~~~--G~~vVVG~---~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 125 QKTFNLRLDQRSYITEEDARGQINELKAN--GTEAVVGA---GLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHTCCEEEEEESSHHHHHHHHHHHHHT--TCCEEEES---HHHHHHHHHTTSEEEESSC
T ss_pred HHHhCCceEEEEeCCHHHHHHHHHHHHHC--CCCEEECC---HHHHHHHHHcCCcEEEECC
Confidence 222221 144667777777766 89999999 4478999999999999874
No 98
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=71.94 E-value=28 Score=33.02 Aligned_cols=95 Identities=11% Similarity=0.159 Sum_probs=50.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCc-eEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTV-GVEPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
++.|+++++.+.. + | .+.++.++.|++|+++.+............ .++.++.. .+....+
T Consensus 4 ~~k~l~Il~~~~~-~--~--~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~~~~---------~d~~~~~----- 64 (425)
T 3vot_A 4 RNKNLAIICQNKH-L--P--FIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLPLF---------EDEEAAM----- 64 (425)
T ss_dssp CCCEEEEECCCTT-C--C--HHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEECTT---------TCHHHHH-----
T ss_pred CCcEEEEECCChh-H--H--HHHHHHHHCCCEEEEEECCCcccccCHhhccEEEecCCC---------CCHHHHH-----
Confidence 4566777764432 2 2 356777888999998866533211111111 33444311 1111221
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEe--CCCchhHHHHHHHcCCce
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVY--DSLLTWALDVARQFGIYG 127 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~--D~~~~~~~~~a~~lgiP~ 127 (459)
+.+..+.++. ++|.|++ |.....+..+++.+|+|.
T Consensus 65 ---~~~~~~~~~~-----~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 ---DVVRQTFVEF-----PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ---HHHHHHHHHS-----CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ---HHHHHhhhhc-----CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 2233343432 7899884 433345677889999994
No 99
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=71.69 E-value=4.1 Score=34.67 Aligned_cols=44 Identities=2% Similarity=-0.081 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEecCcccccc
Q 012645 6 ERVHVLVLTYPAQGHINP-LLQFAKRLASKRVKATLATTHYTVKSI 50 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p-~~~la~~L~~~Gh~V~~~~~~~~~~~~ 50 (459)
+.+||++.-.|+ +..+- .+.+.+.|+++|++|.++.++.-...+
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 457898888887 45665 899999999999999999998766443
No 100
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=71.61 E-value=4.8 Score=32.06 Aligned_cols=52 Identities=12% Similarity=0.197 Sum_probs=36.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
|.+.|.+.-.++++.+..-.+.+.+.+|...++.|++|+++.+......+.+
T Consensus 2 ~~~~m~~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 2 MAEEKKKKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp -----CCEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred ccccccCCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 3333433345666667888899999999999999999999998766544433
No 101
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=71.60 E-value=7.6 Score=36.12 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=32.1
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
++|+|++. |+-|-..-...||..|+++|++|.++..+.
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 35555554 799999999999999999999999999875
No 102
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=71.44 E-value=1.5 Score=40.61 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=36.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEE
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVE 58 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~ 58 (459)
|+.|||.++..|+.|- .+|..|++.||+|+++......+.+.+.|+...
T Consensus 1 M~~mkI~IiGaG~~G~-----~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~ 49 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGG-----YLGARLALAGEAINVLARGATLQALQTAGLRLT 49 (335)
T ss_dssp -CCCCEEEESCCHHHH-----HHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEe
Confidence 3458999998888884 578999999999999987544444555677665
No 103
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=71.14 E-value=7.2 Score=30.53 Aligned_cols=43 Identities=14% Similarity=0.022 Sum_probs=32.1
Q ss_pred cEE-EEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEecCcccccc
Q 012645 8 VHV-LVLTYP--AQGHINPLLQFAKRLASKRVKATLATTHYTVKSI 50 (459)
Q Consensus 8 ~ki-l~~~~~--~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~ 50 (459)
+|+ ++++.+ +.......+.+|...++.||+|+++...+....+
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLL 61 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHH
Confidence 344 444445 5677888999999999999999999887665543
No 104
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=70.75 E-value=2.6 Score=35.57 Aligned_cols=47 Identities=11% Similarity=0.030 Sum_probs=38.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
+++.||++...|+.|=+. ...+.+.|+++|++|.++.++.-..++..
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 345689888888887775 78999999999999999999877666543
No 105
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=70.26 E-value=6.4 Score=34.85 Aligned_cols=39 Identities=8% Similarity=-0.129 Sum_probs=35.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.+.||++.+.++..|-....-++..|..+|++|++++..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 457899999999999999999999999999999998864
No 106
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=70.20 E-value=25 Score=29.93 Aligned_cols=104 Identities=8% Similarity=0.023 Sum_probs=59.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCc-c---ccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHY-T---VKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLES 81 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~-~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (459)
|||.++.+|+.+- +.++.++|.+. +|+|..+.+.. . .+.+++.|+.+..++.. . ..+
T Consensus 4 ~ki~vl~sG~g~~---~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~----~---~~~------- 66 (212)
T 3av3_A 4 KRLAVFASGSGTN---FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPK----D---YPS------- 66 (212)
T ss_dssp EEEEEECCSSCHH---HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGG----G---SSS-------
T ss_pred cEEEEEEECCcHH---HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcc----c---ccc-------
Confidence 5888877776443 55666778776 78987776542 1 23344568888766421 0 011
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
.....+.+.+.++++ +||+||.=.+. .....+-+.....++-+.++.
T Consensus 67 -~~~~~~~~~~~l~~~-----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 114 (212)
T 3av3_A 67 -KAAFESEILRELKGR-----QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSL 114 (212)
T ss_dssp -HHHHHHHHHHHHHHT-----TCCEEEESSCCSCCCHHHHHHTTTCEEEEESSC
T ss_pred -hhhhHHHHHHHHHhc-----CCCEEEEchhhhhCCHHHHhhhcCCEEEEecCc
Confidence 011122333444554 89999976553 334455566666777776654
No 107
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=69.91 E-value=22 Score=32.40 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
.|||+|+..+.++ ++.-++|.+.||+|..+.+..
T Consensus 4 mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 4 MIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp TSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred ceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 4899999888664 344577878899998887743
No 108
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=69.70 E-value=23 Score=34.56 Aligned_cols=93 Identities=6% Similarity=-0.016 Sum_probs=52.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc-ccccCCCCceEEEcCCCCCCCCC-CCCCCHHHHHHHHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT-VKSIHATTVGVEPISDGFDEGGF-KQAPSVKAYLESFKT 84 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (459)
..|++++..+. -.+.+++.|.+.|-+|+.+++... .+..+. +...+..+.. -...+
T Consensus 348 GKrv~i~g~~~-----~~~~la~~L~ElGm~vv~~gt~~~~~~d~~~-------l~~~~~~~~~i~~~~d---------- 405 (492)
T 3u7q_A 348 GKRVMLYIGGL-----RPRHVIGAYEDLGMEVVGTGYEFAHNDDYDR-------TMKEMGDSTLLYDDVT---------- 405 (492)
T ss_dssp TCEEEECBSSS-----HHHHTHHHHHTTTCEEEEEEESSCCHHHHHH-------HHTTSCTTCEEEESCB----------
T ss_pred CCEEEEECCCc-----hHHHHHHHHHHCCCEEEEEeCCCCCHHHHHH-------HHHhCCCCcEEEcCCC----------
Confidence 35777754432 356688888899999998776532 111100 0000000000 00001
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEc
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMM 131 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~ 131 (459)
...+.++++.. +||++|.. .....+|+++|||++.+.
T Consensus 406 --~~el~~~i~~~-----~pDL~ig~---~~~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 406 --GYEFEEFVKRI-----KPDLIGSG---IKEKFIFQKMGIPFREMH 442 (492)
T ss_dssp --HHHHHHHHHHH-----CCSEEEEC---HHHHHHHHHTTCCEEESS
T ss_pred --HHHHHHHHHhc-----CCcEEEeC---cchhHHHHHcCCCEEecc
Confidence 12344455554 89999998 446789999999999753
No 109
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=69.35 E-value=32 Score=29.28 Aligned_cols=103 Identities=11% Similarity=0.151 Sum_probs=59.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecCcc----ccccCCCCceEEEcCC-CCCCCCCCCCCCHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTHYT----VKSIHATTVGVEPISD-GFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~~~----~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 80 (459)
|||+++..|..+ -+..|.+++.+. +|+|..+.+..- .+.+++.|+.+..++. .+. +
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~--------~------ 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFD--------S------ 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCS--------S------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCccccc--------c------
Confidence 578888777654 356677777665 588877765432 2334557888887642 111 0
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
+....+.+.+.++++ +||+||.-.+. .....+-+.....++-+.++.
T Consensus 64 --r~~~~~~~~~~l~~~-----~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 64 --REAYDRELIHEIDMY-----APDVVVLAGFMRILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp --HHHHHHHHHHHHGGG-----CCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred --hhhccHHHHHHHHhc-----CCCEEEEeChhhhCCHHHHhhccCCEEEEccCc
Confidence 011122233344444 89999977553 334455566666778776654
No 110
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=69.33 E-value=13 Score=33.96 Aligned_cols=33 Identities=9% Similarity=0.089 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+|||+|+..+.++- +.-++|.+.||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeC
Confidence 48999998886653 4457788899999887763
No 111
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=68.96 E-value=20 Score=34.99 Aligned_cols=91 Identities=13% Similarity=0.085 Sum_probs=50.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccc----ccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVK----SIHATTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
..|++++..+. + .+.+++.|.+.|-+|+.+++..... .+.+. ++++ ... -...+
T Consensus 332 GKrv~i~~~~~--~---~~~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~------l~~~--~~i-~~d~d-------- 389 (483)
T 3pdi_A 332 GKRVLLYTGGV--K---SWSVVSALQDLGMKVVATGTKKSTEEDKARIREL------MGDD--VKM-LDEGN-------- 389 (483)
T ss_dssp TCEEEEECSSS--C---HHHHHHHHHHHTCEEEEECBSSSCHHHHHHHHHH------SCSS--CCB-CCSCS--------
T ss_pred CCEEEEECCCc--h---HHHHHHHHHHCCCEEEEEecCCCCHHHHHHHHHh------cCCC--CEE-EeCCC--------
Confidence 36788866543 3 3467777888999998876653211 01000 0000 000 00001
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMM 131 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~ 131 (459)
...+.++++.. +||++|... ....+|+++|||++.+.
T Consensus 390 ----~~el~~~i~~~-----~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 390 ----ARVLLKTVDEY-----QADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp ----HHHHHHHHHHT-----TCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred ----HHHHHHHHHhc-----CCCEEEECC---chhHHHHHcCCCEEEec
Confidence 12233444444 899999974 35678999999998653
No 112
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=68.60 E-value=5.6 Score=33.93 Aligned_cols=38 Identities=13% Similarity=-0.142 Sum_probs=35.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+.||++.+.++..|-....-++..|.++|++|.+++..
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 46899999999999999999999999999999998865
No 113
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=67.57 E-value=14 Score=32.39 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=25.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++.++ .|+++++.++.| +- .++|+.|+++|++|+++.-.
T Consensus 1 M~~~~~-~k~vlVTGas~G-IG--~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 1 MSLTPR-NATVAVIGAGDY-IG--AEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp ----CC-SCEEEEECCSSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCcCCC-CCEEEEECCCch-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 554333 456777766543 33 47899999999999888754
No 114
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=67.57 E-value=45 Score=32.77 Aligned_cols=34 Identities=9% Similarity=0.060 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
..|++++. +-.-.+.|++.|.+.|-+|..++...
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 35777773 44456788888999999988776653
No 115
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=67.38 E-value=13 Score=32.23 Aligned_cols=27 Identities=26% Similarity=0.314 Sum_probs=21.7
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEecCcc
Q 012645 18 QGHINPLLQFAKRLASKRVKATLATTHYT 46 (459)
Q Consensus 18 ~GH~~p~~~la~~L~~~Gh~V~~~~~~~~ 46 (459)
.|.+- .++|++|.++|++|++++.+..
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~~ 54 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKRA 54 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTTS
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCcc
Confidence 56554 4679999999999999998753
No 116
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=67.24 E-value=15 Score=36.33 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=26.3
Q ss_pred HHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEE
Q 012645 89 TLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAM 130 (459)
Q Consensus 89 ~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~ 130 (459)
.+.++++.. +||++|.. .....+|+++|||++.+
T Consensus 447 el~~~i~~~-----~pDl~ig~---~~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 447 DMEVVLEKL-----KPDMFFAG---IKEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHH-----CCSEEEEC---HHHHHHHHHTTCEEEET
T ss_pred HHHHHHHhc-----CCCEEEcc---cchhHHHHhcCCCEEEe
Confidence 355566665 89999987 34678899999999975
No 117
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=66.86 E-value=50 Score=26.78 Aligned_cols=142 Identities=18% Similarity=0.153 Sum_probs=81.6
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcc---cCcccee
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAH---QAVGCFI 345 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~---~~~~~~I 345 (459)
+|.|-|-+||.. +-...++....++..|..+-+.+.+- -..|+... ++.+. -.++++|
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-HR~p~~l~----------------~~~~~a~~~g~~ViI 71 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA-HRTPDYMF----------------EYAETARERGLKVII 71 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-TTSHHHHH----------------HHHHHTTTTTCCEEE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec-cCCHHHHH----------------HHHHHHHhCCCcEEE
Confidence 567888888865 56678888888999887765554432 22333221 11111 1133377
Q ss_pred ccCchh----hHHHhhhcCCeeeccccccc---hhhHHHHHHH--hhhceEE-eeecCCCcccHHHHHHHHHHHhcChhh
Q 012645 346 THCGWN----SILEGLSLGVAVVAVPQFSD---QPTNAKFVEE--VWEVGVR-AKKNRAGIVTGEELNKCVNEVMDGERS 415 (459)
Q Consensus 346 ~HGG~g----s~~eal~~GvP~li~P~~~D---Q~~na~rv~~--~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~~~ 415 (459)
.=.|.. ++..++ .-.|+|.+|.... -.+--.-+.+ . |+... +...+.+..++..+...|. -+.|+
T Consensus 72 a~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~-- 146 (170)
T 1xmp_A 72 AGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD-- 146 (170)
T ss_dssp EEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH--
T ss_pred EECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH--
Confidence 665543 444444 4689999997542 2222233445 4 44321 1111001466666666664 45677
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 012645 416 QKIKRNVSKWREFAKKAVSA 435 (459)
Q Consensus 416 ~~~~~~a~~l~~~~~~~~~~ 435 (459)
.++++.+.++++.++.+.+
T Consensus 147 -~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 -DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp -HHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHHHHHHh
Confidence 9999999999988875443
No 118
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=66.41 E-value=6.6 Score=32.65 Aligned_cols=43 Identities=9% Similarity=0.105 Sum_probs=35.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
||++.-.|+.|=+ -...+.+.|+++|++|.++.++.-..++..
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 6777777777666 678999999999999999999987777654
No 119
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=66.41 E-value=8.4 Score=30.27 Aligned_cols=50 Identities=12% Similarity=0.029 Sum_probs=31.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHH--HHHHHHHHHhCCCeEEEEecCccccccC
Q 012645 1 MENQRERVHVLVLTYPAQGHINP--LLQFAKRLASKRVKATLATTHYTVKSIH 51 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p--~~~la~~L~~~Gh~V~~~~~~~~~~~~~ 51 (459)
|+.+|+|. .++++.+-+|+... .+.+|.++.+.||+|.++...+....+.
T Consensus 1 ~~~~Mkk~-~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~~ 52 (136)
T 2hy5_B 1 MSEVVKKF-MYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQLT 52 (136)
T ss_dssp ----CCEE-EEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGGB
T ss_pred CccchhEE-EEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHh
Confidence 55555443 33445555665444 5777999999999999998887665443
No 120
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=66.34 E-value=4 Score=32.33 Aligned_cols=45 Identities=13% Similarity=0.225 Sum_probs=33.7
Q ss_pred CcEEEEEc-CCCc-cCHHHHHHHHHHHHhCCCeEEEEecCccccccC
Q 012645 7 RVHVLVLT-YPAQ-GHINPLLQFAKRLASKRVKATLATTHYTVKSIH 51 (459)
Q Consensus 7 ~~kil~~~-~~~~-GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~ 51 (459)
.||+|++- +|.. -.+--.+-+...|.++||+|++++++.....++
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 47775554 4644 444447888999999999999999998776654
No 121
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=66.30 E-value=9 Score=32.80 Aligned_cols=117 Identities=10% Similarity=0.056 Sum_probs=0.0
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc---ccccCCCCceEEEcCCCCCCCCCCCCCCHHH
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT---VKSIHATTVGVEPISDGFDEGGFKQAPSVKA 77 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (459)
+.....+|||+++..|+.+-+..++.-.+. ..+++|..+.+... .+.+++.|+.+..++..-...
T Consensus 6 ~~~~~~~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~~~~~~~~---------- 73 (215)
T 3da8_A 6 RVPPSAPARLVVLASGTGSLLRSLLDAAVG--DYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADHPS---------- 73 (215)
T ss_dssp EECCCSSEEEEEEESSCCHHHHHHHHHSST--TCSEEEEEEEESSCCHHHHHHHHTTCCEEECCGGGSSS----------
T ss_pred cCCCCCCcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEEEEeCCchHHHHHHHHcCCCEEEeCcccccc----------
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCC
Q 012645 78 YLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQE 156 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 156 (459)
+....+.+.+.++++ ++|+||.=.+. .....+-+...-.++-+.++.
T Consensus 74 -----r~~~d~~~~~~l~~~-----~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSL---------------------- 121 (215)
T 3da8_A 74 -----RDAWDVAITAATAAH-----EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPAL---------------------- 121 (215)
T ss_dssp -----HHHHHHHHHHHHHTT-----CCSEEEEEECCSCCCHHHHHHHTTTEEEEESSC----------------------
T ss_pred -----hhhhhHHHHHHHHhh-----CCCEEEEcCchhhCCHHHHhhccCCeEEeCccc----------------------
Q ss_pred CCcccCCCCC
Q 012645 157 TVPLTLPGLP 166 (459)
Q Consensus 157 ~~~~~~p~~~ 166 (459)
+|.+.
T Consensus 122 -----LP~yr 126 (215)
T 3da8_A 122 -----LPAFP 126 (215)
T ss_dssp -----TTSSC
T ss_pred -----ccCCC
No 122
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=66.10 E-value=46 Score=29.84 Aligned_cols=106 Identities=10% Similarity=0.104 Sum_probs=62.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecC---ccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTH---YTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYL 79 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (459)
.+++||+++..|. || -+.+|..+.++- ..+|..+.+. ...+.+++.|+.+..+|.... +
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~gIp~~~~~~~~~--------~----- 150 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDIPFYHFPVNKD--------T----- 150 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTCCEEECCCCTT--------T-----
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcCCCEEEeCCCcc--------c-----
Confidence 3567998888766 44 334555554432 2477666553 345566678999998863210 0
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
+....+.+.++++++ ++|+||.=.+. .....+.+.+.-.++-+.++.
T Consensus 151 ---r~~~~~~~~~~l~~~-----~~Dlivlagy~~il~~~~l~~~~~~~iNiHpSl 198 (288)
T 3obi_A 151 ---RRQQEAAITALIAQT-----HTDLVVLARYMQILSDEMSARLAGRCINIHHSF 198 (288)
T ss_dssp ---HHHHHHHHHHHHHHH-----TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEEC
T ss_pred ---HHHHHHHHHHHHHhc-----CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCccc
Confidence 011123444555665 89999976554 445556666766778776654
No 123
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=66.03 E-value=16 Score=30.22 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+.|+|+++ |+.|-+- ..++++|.++||+|+.++-..
T Consensus 2 ~~~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 2 AVKKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCCEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeCh
Confidence 34777665 4455554 467889999999999987643
No 124
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=65.95 E-value=5.3 Score=35.68 Aligned_cols=48 Identities=15% Similarity=0.125 Sum_probs=32.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPI 60 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~ 60 (459)
|++|||++. |+ |.+-. .|+++|.++||+|+.++-.... ...++.++..
T Consensus 1 M~~~~ilVt--Ga-G~iG~--~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~ 48 (286)
T 3gpi_A 1 MSLSKILIA--GC-GDLGL--ELARRLTAQGHEVTGLRRSAQP---MPAGVQTLIA 48 (286)
T ss_dssp -CCCCEEEE--CC-SHHHH--HHHHHHHHTTCCEEEEECTTSC---CCTTCCEEEC
T ss_pred CCCCcEEEE--CC-CHHHH--HHHHHHHHCCCEEEEEeCCccc---cccCCceEEc
Confidence 345787776 35 76655 5788999999999999764322 1246666654
No 125
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=65.62 E-value=8.9 Score=32.67 Aligned_cols=48 Identities=13% Similarity=0.223 Sum_probs=29.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEE
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEP 59 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~ 59 (459)
|||+++ |+.|.+-. .|++.|.++||+|+.++-..........++.++.
T Consensus 5 ~~ilIt--GatG~iG~--~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~ 52 (227)
T 3dhn_A 5 KKIVLI--GASGFVGS--ALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKK 52 (227)
T ss_dssp CEEEEE--TCCHHHHH--HHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEEC
T ss_pred CEEEEE--cCCchHHH--HHHHHHHHCCCEEEEEEcCcccchhccCceEEEE
Confidence 565554 55566654 6789999999999998765433211124555543
No 126
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=65.58 E-value=5 Score=36.91 Aligned_cols=37 Identities=14% Similarity=0.016 Sum_probs=31.4
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 9 HVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 9 kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+|+|++. |+-|-..-...||..|+++|++|.++..+.
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4544443 799999999999999999999999999875
No 127
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=65.37 E-value=29 Score=33.74 Aligned_cols=107 Identities=8% Similarity=0.023 Sum_probs=67.5
Q ss_pred ceE-EeeecHH---HHhcccCccceec---cCchh-hHHHhhhcCC-----eeecccccc--chhhHHHHHHHhhhceEE
Q 012645 324 GLV-VRWCNQF---EVLAHQAVGCFIT---HCGWN-SILEGLSLGV-----AVVAVPQFS--DQPTNAKFVEEVWEVGVR 388 (459)
Q Consensus 324 v~v-~~~~p~~---~lL~~~~~~~~I~---HGG~g-s~~eal~~Gv-----P~li~P~~~--DQ~~na~rv~~~~G~G~~ 388 (459)
|.+ .+.+|+. ++++.+++ ||. .=|+| ++.||+++|+ |+|+--+.+ ++. .- |..
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l-------~~---g~l 400 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL-------TS---ALI 400 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC-------TT---SEE
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh-------CC---eEE
Confidence 454 3777766 46777787 664 34564 8899999998 676654432 332 12 445
Q ss_pred eeecCCCcccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Q 012645 389 AKKNRAGIVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLLKA 453 (459)
Q Consensus 389 ~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~~~ 453 (459)
++ ..+.+.++++|.++|+++. +.-+++.++..+.+.+ .+....++.+++.+.+.
T Consensus 401 v~-----p~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 401 VN-----PYDRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp EC-----TTCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred EC-----CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 55 4678999999999998641 1233334444444433 56677788888877654
No 128
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=64.86 E-value=39 Score=30.54 Aligned_cols=105 Identities=7% Similarity=0.072 Sum_probs=63.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEec--CccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATT--HYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLES 81 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (459)
+++||+++..+. || -+.+|..+.++- +.+|..+.+ +.....+++.|+.+..+|.... .+
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~~~~~~~~~------~r-------- 166 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPYYHVPVDPK------DK-------- 166 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCEEECCCCSS------CC--------
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCEEEcCCCcC------CH--------
Confidence 568998888776 54 355565555432 468777765 3445566778999988863210 00
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
....+.+.++++++ ++|+||.=.+. .....+.+.+.-.++-+.++.
T Consensus 167 --~~~~~~~~~~l~~~-----~~DliVlagym~IL~~~~l~~~~~~~INiHpSl 213 (302)
T 3o1l_A 167 --EPAFAEVSRLVGHH-----QADVVVLARYMQILPPQLCREYAHQVINIHHSF 213 (302)
T ss_dssp --HHHHHHHHHHHHHT-----TCSEEEESSCCSCCCTTHHHHTTTCEEEEESSC
T ss_pred --HHHHHHHHHHHHHh-----CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCccc
Confidence 01123344555555 89999976554 334455566666777776644
No 129
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=64.82 E-value=20 Score=34.38 Aligned_cols=41 Identities=10% Similarity=0.167 Sum_probs=34.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcccc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVK 48 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~ 48 (459)
..|+++..++-|-..-...||..|+++|++|.++..+.+..
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 35566666799999999999999999999999999876654
No 130
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=64.72 E-value=43 Score=30.00 Aligned_cols=106 Identities=11% Similarity=0.105 Sum_probs=63.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecC--ccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTH--YTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (459)
.+++||+++..|. || -+.+|..+..+- ..+|..+.+. .....+++.|+.+..+|.... +
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~--------~------ 150 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPYYHFALDPK--------D------ 150 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCBTT--------B------
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcC--------C------
Confidence 4578998888776 44 444555554432 3787776653 334455667999998863210 1
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
+....+.+.+++++. ++|+||.=.+. .....+.+.+.-.++-+.++.
T Consensus 151 --r~~~~~~~~~~l~~~-----~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSl 198 (286)
T 3n0v_A 151 --KPGQERKVLQVIEET-----GAELVILARYMQVLSPELCRRLDGWAINIHHSL 198 (286)
T ss_dssp --HHHHHHHHHHHHHHH-----TCSEEEESSCCSCCCHHHHHHTTTSEEEEEECS
T ss_pred --HHHHHHHHHHHHHhc-----CCCEEEecccccccCHHHHhhhcCCeEEecccc
Confidence 011123445556665 89999976554 445556666666777776654
No 131
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=64.00 E-value=17 Score=31.90 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
+.|++++|.++. -+- ..+|++|+++|++|++...
T Consensus 3 ~~k~vlVTGas~-gIG--~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 3 QNKCALVTGSSR-GVG--KAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCCEEEESSCSS-HHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCc-hHH--HHHHHHHHHCCCEEEEEcC
Confidence 457888886653 343 4688999999999998643
No 132
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=63.70 E-value=63 Score=28.99 Aligned_cols=106 Identities=8% Similarity=0.049 Sum_probs=63.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecC--ccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTH--YTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLE 80 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (459)
.+++||+++..+. || -+.+|..+..+- ..+|..+.+. .....+++.|+.+..+|.... +
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~--------~------ 155 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPFRHFPITAD--------T------ 155 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCCSS--------C------
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcC--------C------
Confidence 3568998888665 54 345555554432 4687777653 344456668999998864210 1
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 81 SFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
+....+.+.+++++. ++|+||.=.+. .....+.+.+.-.++-+.++.
T Consensus 156 --r~~~~~~~~~~l~~~-----~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSl 203 (292)
T 3lou_A 156 --KAQQEAQWLDVFETS-----GAELVILARYMQVLSPEASARLANRAINIHHSF 203 (292)
T ss_dssp --HHHHHHHHHHHHHHH-----TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEEC
T ss_pred --HHHHHHHHHHHHHHh-----CCCEEEecCchhhCCHHHHhhhcCCeEEeCCCc
Confidence 011123444555665 89999976554 445556666766778776654
No 133
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=63.63 E-value=8.3 Score=33.04 Aligned_cols=39 Identities=8% Similarity=-0.096 Sum_probs=35.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
++.||++.+.++..|-....-++..|..+|++|++++..
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 457999999999999999999999999999999999865
No 134
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=63.02 E-value=5.5 Score=34.83 Aligned_cols=43 Identities=12% Similarity=0.002 Sum_probs=36.0
Q ss_pred CCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEecCcccc
Q 012645 6 ERVHVLVLTYP---AQGHINPLLQFAKRLASKRVKATLATTHYTVK 48 (459)
Q Consensus 6 ~~~kil~~~~~---~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~ 48 (459)
.+||.+|++.| +.|-=.-...|+..|+++|++|+..--+.+..
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlN 66 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCcee
Confidence 46999999987 66667778999999999999999987766554
No 135
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=62.75 E-value=6.5 Score=35.99 Aligned_cols=33 Identities=12% Similarity=0.094 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+|||+++..+ -...++++++++||+|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 5899999877 46788999999999999887764
No 136
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=62.72 E-value=25 Score=29.99 Aligned_cols=102 Identities=14% Similarity=0.052 Sum_probs=56.8
Q ss_pred hhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHH-H-
Q 012645 257 DQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQF-E- 334 (459)
Q Consensus 257 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~-~- 334 (459)
.++-++|...+ ..+|+-|... -.+....++....+-+++=++... .++.......-.+..++..++.. .
T Consensus 31 ~~lg~~LA~~g---~~lV~GGg~~----GlM~aa~~gA~~~GG~~iGv~p~~--l~~~e~~~~~~~~~~~~~~~~~Rk~~ 101 (216)
T 1ydh_A 31 IELGNELVKRK---IDLVYGGGSV----GLMGLISRRVYEGGLHVLGIIPKA--LMPIEISGETVGDVRVVADMHERKAA 101 (216)
T ss_dssp HHHHHHHHHTT---CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEEGG--GHHHHCCSSCCSEEEEESSHHHHHHH
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHhHHHHHHHHHcCCcEEEEechh--cCccccccCCCCcccccCCHHHHHHH
Confidence 34667776653 4555555531 356666776666676766554421 00100000001224455555544 3
Q ss_pred HhcccCccceeccCchhhHHHhh---------hcCCeeecccc
Q 012645 335 VLAHQAVGCFITHCGWNSILEGL---------SLGVAVVAVPQ 368 (459)
Q Consensus 335 lL~~~~~~~~I~HGG~gs~~eal---------~~GvP~li~P~ 368 (459)
+..+++ ..++--||.||.-|.. .+++|++++-.
T Consensus 102 ~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 102 MAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp HHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred HHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 333444 4577889999988776 57999998863
No 137
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=62.58 E-value=4.6 Score=35.77 Aligned_cols=52 Identities=13% Similarity=0.240 Sum_probs=37.9
Q ss_pred cCccceeccCchhhHHHhhhc---CCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 339 QAVGCFITHCGWNSILEGLSL---GVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 339 ~~~~~~I~HGG~gs~~eal~~---GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
+++ +|+=||=||+++++.. ++|++.++.. .. |- + . .+.++++.+++++++++
T Consensus 42 ~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~~---Gf-l--~---~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------RL---GF-L--T---SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------SC---CS-S--C---CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------CC---Cc-c--C---cCCHHHHHHHHHHHHcC
Confidence 555 9999999999999877 8898888732 01 11 1 1 35678888888888765
No 138
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=62.50 E-value=6.9 Score=30.29 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+.|||+++.. |.+.. .+|+.|.++||+|+++...
T Consensus 3 ~~m~i~IiG~---G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI---GRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC---SHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC---CHHHH--HHHHHHHhCCCeEEEEECC
Confidence 3589988843 55544 5789999999999988753
No 139
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=62.31 E-value=21 Score=31.38 Aligned_cols=80 Identities=14% Similarity=0.239 Sum_probs=48.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc-----ccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHH
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT-----VKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFK 83 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (459)
|++++|.++.| +- .++|+.|+++|.+|.+..-... .+.+++.|.+...+.-++.+
T Consensus 10 KvalVTGas~G-IG--~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~----------------- 69 (255)
T 4g81_D 10 KTALVTGSARG-LG--FAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTD----------------- 69 (255)
T ss_dssp CEEEETTCSSH-HH--HHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC-----------------
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-----------------
Confidence 79999988766 32 4689999999999988654321 11223346566655432222
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCC
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDS 111 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~ 111 (459)
.+.++++++++.+.-.+.|++|...
T Consensus 70 ---~~~v~~~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 70 ---ELAIEAAFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp ---HHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred ---HHHHHHHHHHHHHHCCCCcEEEECC
Confidence 1233344444443345889999885
No 140
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=61.95 E-value=29 Score=29.55 Aligned_cols=105 Identities=13% Similarity=0.148 Sum_probs=60.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEecCcc----ccccCCCCceEEEcCCC-CCCCCCCCCCCHHHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLAS-KRVKATLATTHYT----VKSIHATTVGVEPISDG-FDEGGFKQAPSVKAYL 79 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~-~Gh~V~~~~~~~~----~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 79 (459)
+++||+++..|+.+-+..+ .++..+ .+++|..+.+..- .+.+++.|+.+..++.. ++ + .
T Consensus 4 ~~~riavl~SG~Gsnl~al---l~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~~--------~---r- 68 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAI---IGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFP--------S---R- 68 (215)
T ss_dssp CCEEEEEEESSCCHHHHHH---HHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGSS--------S---H-
T ss_pred CCcEEEEEEeCCcHHHHHH---HHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCccccC--------c---h-
Confidence 4789998887765544444 444433 3689887776422 23455579888877521 11 0 0
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
....+.+.+.++++ ++|+||.-.+. .....+-+...-.++-+.++.
T Consensus 69 ----~~~d~~~~~~l~~~-----~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 115 (215)
T 3tqr_A 69 ----TDFESTLQKTIDHY-----DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSL 115 (215)
T ss_dssp ----HHHHHHHHHHHHTT-----CCSEEEESSCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred ----hHhHHHHHHHHHhc-----CCCEEEEccchhhCCHHHHhhccCCeEEeCccc
Confidence 00122334444544 89999976553 334455566666777776654
No 141
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=61.36 E-value=7.9 Score=32.40 Aligned_cols=51 Identities=12% Similarity=0.111 Sum_probs=37.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCC-CceEEE
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHAT-TVGVEP 59 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~-g~~~~~ 59 (459)
+||++...|+.|-+ =...+.+.|+++|++|.++.++.-..++... ++++..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~e~~~~~~~ 53 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKEEHSLTFEE 53 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHHC-------
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhHHhCCCHHH
Confidence 47888888988854 6799999999999999999998877776552 454444
No 142
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=61.22 E-value=5 Score=35.86 Aligned_cols=52 Identities=17% Similarity=0.191 Sum_probs=37.2
Q ss_pred cCccceeccCchhhHHHhhhc------CCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 339 QAVGCFITHCGWNSILEGLSL------GVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 339 ~~~~~~I~HGG~gs~~eal~~------GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
+++ +|.=||=||+++++.. ++|++.+|.. .+ | .+ . .+.++++.+++++++++
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~l---g-fl--~---~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------HL---G-FY--A---DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------SC---C-SS--C---CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------CC---C-cC--C---cCCHHHHHHHHHHHHcC
Confidence 455 9999999999999765 8999988741 11 1 11 1 45577788888877765
No 143
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=61.10 E-value=18 Score=26.87 Aligned_cols=39 Identities=8% Similarity=0.106 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+++||+++|..+.|--.=.-.+-+.+.++|.++.+-..
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 445789999987666665555888888889988765543
No 144
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=61.07 E-value=4.5 Score=36.78 Aligned_cols=38 Identities=16% Similarity=0.053 Sum_probs=26.9
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+...++|||.|+-.|..|. .+|+.|+++||+|++...
T Consensus 1 M~~~~~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 55555678999998777774 689999999999998754
No 145
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=60.32 E-value=22 Score=30.85 Aligned_cols=40 Identities=23% Similarity=0.235 Sum_probs=25.4
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|...++. |+++++.++ |-+- ..+|++|+++|++|+++.-.
T Consensus 1 M~~~l~~-k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 1 MTQRLKD-KLAVITGGA-NGIG--RAIAERFAVEGADIAIADLV 40 (249)
T ss_dssp --CTTTT-CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCC-CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEcCC
Confidence 4443433 456666544 3344 46899999999999988654
No 146
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=59.69 E-value=6.1 Score=36.69 Aligned_cols=34 Identities=29% Similarity=0.180 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|++|||.++..|..|. .+|..|.+.||+|+++..
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 3458999998777664 468889999999998865
No 147
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=59.66 E-value=6.4 Score=35.90 Aligned_cols=46 Identities=11% Similarity=0.105 Sum_probs=35.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEE
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEP 59 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~ 59 (459)
|||.++..|+.|- .+|..|++.||+|+++.... .+.+.+.|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFS 48 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEc
Confidence 7899999999884 46889999999999998765 3556566777665
No 148
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=59.45 E-value=15 Score=31.72 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=36.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+-+++|++..-|+-|-..-++.+|.+|+++|++|.+...+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34688999999999999999999999999999998887754
No 149
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=59.17 E-value=18 Score=31.37 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|.+++|.++.| +- ..+|++|+++|++|++....
T Consensus 4 ~k~~lVTGas~g-IG--~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 4 TKSALVTGASRG-IG--RSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp SCEEEETTCSSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCh-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 467888866543 33 46789999999999887653
No 150
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=59.09 E-value=30 Score=31.94 Aligned_cols=96 Identities=9% Similarity=0.027 Sum_probs=56.1
Q ss_pred cEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEecCccccccCC----CCceEEEcCCCCCCCCCCCCCCHHHHH
Q 012645 8 VHVLVLTYPAQGH----INPLLQFAKRLASKRVKATLATTHYTVKSIHA----TTVGVEPISDGFDEGGFKQAPSVKAYL 79 (459)
Q Consensus 8 ~kil~~~~~~~GH----~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (459)
.-|++.+..+... ..-+.++++.|.++|++|.+.+++...+.+++ .+-..+.+. ...++
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~---------g~~sl---- 252 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVAT---------GKFQL---- 252 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECT---------TCCCH----
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEee---------CCCCH----
Confidence 3456666544321 34599999999989999998777655443221 111111110 00111
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEccc
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~~ 133 (459)
..+..+++ +.|++|+.. .+...+|..+|+|+|.++..
T Consensus 253 --------~e~~ali~-------~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 253 --------GPLAAAMN-------RCNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp --------HHHHHHHH-------TCSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred --------HHHHHHHH-------hCCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 12334444 469999753 45667788899999998643
No 151
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=58.28 E-value=15 Score=32.84 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=24.1
Q ss_pred CCCcEEEEEc-CCCccCHHHHH--HHHHHHHhCCCeEEEE
Q 012645 5 RERVHVLVLT-YPAQGHINPLL--QFAKRLASKRVKATLA 41 (459)
Q Consensus 5 ~~~~kil~~~-~~~~GH~~p~~--~la~~L~~~Gh~V~~~ 41 (459)
|+.||||++- .|-..-.+-.+ .+.+.|.++||+|++.
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 7789997765 35444444432 4567888899999986
No 152
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=57.80 E-value=20 Score=32.01 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-|++++|.++.| +- .++|++|+++|++|.++.-.
T Consensus 9 ~k~vlVTGas~G-IG--~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 9 GKTMFISGGSRG-IG--LAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TCEEEEESCSSH-HH--HHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEECC
Confidence 367778866544 33 46899999999999888754
No 153
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=57.72 E-value=22 Score=31.52 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.+.|++++|.++.| +- .++|++|+++|++|+++.-.
T Consensus 21 m~~~k~~lVTGas~G-IG--~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG-IG--LAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCCH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 444578888876643 33 46889999999999887654
No 154
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=57.33 E-value=31 Score=30.59 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-|++++|.++.| +- ..+|++|+++|++|+++.-.
T Consensus 8 gk~vlVTGas~G-IG--~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 8 GKIAIVTGASSG-IG--RAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp TCEEEESSTTSH-HH--HHHHHHHHHTTCEEEECCSC
T ss_pred CCEEEEECCCcH-HH--HHHHHHHHHCCCEEEEEECC
Confidence 467888866543 33 46889999999998876543
No 155
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=57.20 E-value=28 Score=30.03 Aligned_cols=34 Identities=26% Similarity=0.250 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|+++++.++. -+- ..+|+.|.++|++|++....
T Consensus 5 ~k~vlITGas~-gIG--~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 5 EKVALVTGASR-GIG--FEVAHALASKGATVVGTATS 38 (247)
T ss_dssp TCEEEESSCSS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEeCC
Confidence 45777776543 333 47899999999999888764
No 156
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=56.91 E-value=6.8 Score=30.62 Aligned_cols=48 Identities=13% Similarity=0.136 Sum_probs=30.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc-cccCCCCceEEE
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV-KSIHATTVGVEP 59 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~-~~~~~~g~~~~~ 59 (459)
.++|+++..|..| ..+|+.|.++||+|+++...... +.+...++.++.
T Consensus 6 ~~~v~I~G~G~iG-----~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~ 54 (141)
T 3llv_A 6 RYEYIVIGSEAAG-----VGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVI 54 (141)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEE
Confidence 3578887654433 46899999999999988764322 223334655543
No 157
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=56.80 E-value=12 Score=34.20 Aligned_cols=34 Identities=9% Similarity=0.221 Sum_probs=26.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK-R-VKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~-G-h~V~~~~~~ 44 (459)
|++|||+++..|.. +.+++.|++. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 56799999876665 4789999886 7 888887654
No 158
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=56.73 E-value=5.3 Score=36.64 Aligned_cols=46 Identities=15% Similarity=0.244 Sum_probs=36.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEE
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEP 59 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~ 59 (459)
|||+++..|+.|- .+|..|++.||+|+++..... +.+.+.|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~~-~~i~~~Gl~~~~ 48 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSDY-ETVKAKGIRIRS 48 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTTH-HHHHHHCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCChH-HHHHhCCcEEee
Confidence 7999998888884 578899999999999987653 555556776665
No 159
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=56.56 E-value=29 Score=33.52 Aligned_cols=26 Identities=15% Similarity=0.076 Sum_probs=21.9
Q ss_pred CccEEEeCCCchhHHHHHHHcCCceEEEc
Q 012645 103 PVNCIVYDSLLTWALDVARQFGIYGAAMM 131 (459)
Q Consensus 103 ~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~ 131 (459)
+||++|.+.. ...+|+++|||++.+.
T Consensus 385 ~pDl~ig~~~---~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 385 GVDLLISNTY---GKFIAREENIPFVRFG 410 (458)
T ss_dssp CCSEEEESGG---GHHHHHHHTCCEEECS
T ss_pred CCCEEEeCcc---hHHHHHHcCCCEEEee
Confidence 8999999854 5677899999999864
No 160
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=56.56 E-value=53 Score=27.94 Aligned_cols=102 Identities=12% Similarity=0.076 Sum_probs=55.2
Q ss_pred hhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHH-HHh
Q 012645 258 QCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQF-EVL 336 (459)
Q Consensus 258 ~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~-~lL 336 (459)
++-.+|...+ ...|+-|... -.+....++....+-+++=++.... .+............+...++.. .++
T Consensus 36 ~lg~~LA~~G---~~vVsGGg~~----GiM~aa~~gAl~~GG~tiGVlP~~~--~~~e~~~~~~~~~~~~~~f~~Rk~~~ 106 (215)
T 2a33_A 36 DLGNELVSRN---IDLVYGGGSI----GLMGLVSQAVHDGGRHVIGIIPKTL--MPRELTGETVGEVRAVADMHQRKAEM 106 (215)
T ss_dssp HHHHHHHHTT---CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEESSC--C--------CCEEEEESSHHHHHHHH
T ss_pred HHHHHHHHCC---CEEEECCChh----hHhHHHHHHHHHcCCcEEEEcchHh--cchhhccCCCCceeecCCHHHHHHHH
Confidence 4566776553 5556655531 2455666666666666666554321 1111110111233455666655 343
Q ss_pred cccCccceeccCchhhHHHhhh---------cCCeeecccc
Q 012645 337 AHQAVGCFITHCGWNSILEGLS---------LGVAVVAVPQ 368 (459)
Q Consensus 337 ~~~~~~~~I~HGG~gs~~eal~---------~GvP~li~P~ 368 (459)
..-+-..++--||+||.-|... +++|++++-.
T Consensus 107 ~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 107 AKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 3333345778899999988762 4899998864
No 161
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=56.34 E-value=52 Score=29.94 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=53.9
Q ss_pred cEEEEEcCCCccC-----HHHHHHHHHHHHhCCCeEEEEecCccccccCC----CC----ceEEEcCCCCCCCCCCCCCC
Q 012645 8 VHVLVLTYPAQGH-----INPLLQFAKRLASKRVKATLATTHYTVKSIHA----TT----VGVEPISDGFDEGGFKQAPS 74 (459)
Q Consensus 8 ~kil~~~~~~~GH-----~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----~g----~~~~~~~~~~~~~~~~~~~~ 74 (459)
..|++.+....+. ..-+..+++.|.++|++|.+.+++...+.++. .+ ...+.+.. ..+
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g---------~~s 251 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAG---------ETQ 251 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTT---------TSC
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccC---------cCC
Confidence 3455655442222 33689999999989999998876654332211 00 01111110 001
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEcc
Q 012645 75 VKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~ 132 (459)
...+..+++ ..|++|+.. .+...+|..+|+|+|.++.
T Consensus 252 ------------l~e~~ali~-------~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 252 ------------LDQAVILIA-------ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp ------------HHHHHHHHH-------TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred ------------HHHHHHHHH-------hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 112234444 469999754 4456668889999999864
No 162
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=56.16 E-value=28 Score=30.32 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|.++.| +- .++|++|+++|++|+++.-.
T Consensus 8 k~~lVTGas~g-IG--~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 8 RVFIVTGASSG-LG--AAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp CEEEEESTTSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 57777765532 33 47899999999999887653
No 163
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=56.07 E-value=32 Score=31.71 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=25.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++.| +- .++|+.|+++|++|+++.-.
T Consensus 46 k~vlVTGas~G-IG--~aia~~La~~Ga~Vvl~~r~ 78 (346)
T 3kvo_A 46 CTVFITGASRG-IG--KAIALKAAKDGANIVIAAKT 78 (346)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEeCCChH-HH--HHHHHHHHHCCCEEEEEECC
Confidence 77888876643 22 46889999999999988754
No 164
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=56.06 E-value=55 Score=28.00 Aligned_cols=150 Identities=12% Similarity=0.040 Sum_probs=80.1
Q ss_pred hhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhc-CCCceEEeeecHHHHhcccC
Q 012645 262 WLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSV-GETGLVVRWCNQFEVLAHQA 340 (459)
Q Consensus 262 ~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~v~v~~~~p~~~lL~~~~ 340 (459)
|++-. .++++.|+.|.++ ...+..|.+.|.++.++.... .+.+.... .+++.+..-.-....|..++
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~----~~~l~~l~~~~~i~~i~~~~~~~dL~~ad 93 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV----SAEINEWEAKGQLRVKRKKVGEEDLLNVF 93 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC----CHHHHHHHHTTSCEEECSCCCGGGSSSCS
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC----CHHHHHHHHcCCcEEEECCCCHhHhCCCC
Confidence 44443 4568888887654 445666777788877764321 12222111 23454442222334565566
Q ss_pred ccceeccCchhhHHHhhh----cCCeeeccccccchhhH-----HHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 341 VGCFITHCGWNSILEGLS----LGVAVVAVPQFSDQPTN-----AKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 341 ~~~~I~HGG~gs~~eal~----~GvP~li~P~~~DQ~~n-----a~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
+ +|.--|.-.+.+.++ .|+|+-++ |.+.. -..+.+- ++-+.+......-.-+..|++.|.+++.
T Consensus 94 L--VIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp 166 (223)
T 3dfz_A 94 F--IVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYD 166 (223)
T ss_dssp E--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSC
T ss_pred E--EEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHcc
Confidence 6 888878766655544 46665332 22221 1222333 4455555441112334677888877775
Q ss_pred ChhhHHHHHHHHHHHHHHHH
Q 012645 412 GERSQKIKRNVSKWREFAKK 431 (459)
Q Consensus 412 ~~~~~~~~~~a~~l~~~~~~ 431 (459)
. +...+.+.+.++++.+++
T Consensus 167 ~-~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 167 E-SYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp T-HHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHH
Confidence 4 334677778888887775
No 165
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=55.92 E-value=20 Score=32.58 Aligned_cols=95 Identities=11% Similarity=-0.007 Sum_probs=51.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc-----------cccCCCCceEEEcCCCCCCCCCCCCCCHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV-----------KSIHATTVGVEPISDGFDEGGFKQAPSVK 76 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (459)
|||+|+..|.++ ....++|.++||+|..+.+.... +.+++.|+.+..... ..+
T Consensus 1 mrivf~gt~~fa-----~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~gIpv~~~~~---------~~~-- 64 (305)
T 2bln_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN---------VNH-- 64 (305)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSC---------CCS--
T ss_pred CEEEEEEcCHHH-----HHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHcCCCEECCCc---------CCc--
Confidence 788888654322 44467777889999877764322 112223555543221 001
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
+.+.+.++.+ +||+||+=.+. .....+-+.....++-+.++.
T Consensus 65 -----------~~~~~~l~~~-----~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 107 (305)
T 2bln_A 65 -----------PLWVERIAQL-----SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (305)
T ss_dssp -----------HHHHHHHHHT-----CCSEEEEESCCSCCCHHHHTTCTTCEEEEESSC
T ss_pred -----------HHHHHHHHhc-----CCCEEEEeccccccCHHHHhcCcCCEEEecCCc
Confidence 1223344444 89999976543 333444445555677776653
No 166
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=55.54 E-value=20 Score=34.24 Aligned_cols=37 Identities=3% Similarity=0.036 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.-|+++++.++.| +--..++|.+|+++|++|.++...
T Consensus 59 ~gK~aLVTGassG-IG~A~aia~ala~~Ga~Vi~~~r~ 95 (418)
T 4eue_A 59 GPKKVLIVGASSG-FGLATRISVAFGGPEAHTIGVSYE 95 (418)
T ss_dssp CCSEEEEESCSSH-HHHHHHHHHHHSSSCCEEEEEECC
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHHhCCCEEEEEecC
Confidence 3578888876654 666677889999999999887654
No 167
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=55.52 E-value=33 Score=29.96 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
-|++++|.++.| +- .++|++|+++|++|++...
T Consensus 8 ~k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 8 NRTIVVAGAGRD-IG--RACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TCEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCch-HH--HHHHHHHHHCCCEEEEEcC
Confidence 467778866543 33 4789999999999988744
No 168
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=54.82 E-value=30 Score=26.59 Aligned_cols=44 Identities=18% Similarity=0.105 Sum_probs=31.1
Q ss_pred cEE-EEEcCCCcc--CHHHHHHHHHHHHhCCCeE-EEEecCccccccC
Q 012645 8 VHV-LVLTYPAQG--HINPLLQFAKRLASKRVKA-TLATTHYTVKSIH 51 (459)
Q Consensus 8 ~ki-l~~~~~~~G--H~~p~~~la~~L~~~Gh~V-~~~~~~~~~~~~~ 51 (459)
||+ ++++.+-+| .....+.+|.++.+.||+| .++...+......
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~~ 48 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNST 48 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHHh
Confidence 444 344444454 4566789999999999999 8888877665444
No 169
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=54.32 E-value=16 Score=27.41 Aligned_cols=36 Identities=14% Similarity=0.006 Sum_probs=27.9
Q ss_pred CccCHHHHHHHHHHHHhC-CC-eEEEEecCccccccCC
Q 012645 17 AQGHINPLLQFAKRLASK-RV-KATLATTHYTVKSIHA 52 (459)
Q Consensus 17 ~~GH~~p~~~la~~L~~~-Gh-~V~~~~~~~~~~~~~~ 52 (459)
+.......+.+|..+.+. || +|.++...+....+.+
T Consensus 14 ~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~~ 51 (117)
T 1jx7_A 14 GSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLR 51 (117)
T ss_dssp TCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGBS
T ss_pred CcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHhc
Confidence 345566789999999998 99 9999988877665543
No 170
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=54.27 E-value=16 Score=27.25 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLA 41 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~ 41 (459)
+.|||+++|..+.|+-.=.-.|-+.+.++|.++.+-
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~ 38 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIE 38 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEE
Confidence 459999999998888866667778888888876543
No 171
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=54.23 E-value=11 Score=34.06 Aligned_cols=41 Identities=17% Similarity=0.270 Sum_probs=25.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|...+.+|+|+++ |+.|.+-. .|+++|.++||+|+.++-..
T Consensus 1 M~~~~~~~~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 1 MQRNTLKHRILIT--GGAGFIGG--HLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp ------CCEEEEE--TTTSHHHH--HHHHHHHHTTCCEEEECCCS
T ss_pred CCcccCCCeEEEE--CCCChHHH--HHHHHHHHCCCEEEEEecCC
Confidence 4433345666655 45566654 57889999999999987543
No 172
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=54.13 E-value=23 Score=31.21 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.++++.++.| +- ..+|++|+++|++|+++...
T Consensus 30 k~vlITGas~g-IG--~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 30 KNVLITGASKG-IG--AEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CEEEETTCSSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 57778866543 33 47899999999999988763
No 173
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=54.11 E-value=11 Score=35.36 Aligned_cols=40 Identities=10% Similarity=0.105 Sum_probs=29.4
Q ss_pred CCCcEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQG-H---INPLLQFAKRL-ASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~G-H---~~p~~~la~~L-~~~Gh~V~~~~~~ 44 (459)
|+||||+++..|--+ | +.....+.++| .++||+|+.+...
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 457999999876444 3 33468888999 9999999988643
No 174
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=53.62 E-value=22 Score=31.29 Aligned_cols=34 Identities=9% Similarity=0.126 Sum_probs=24.9
Q ss_pred EEEEEcCCC-ccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPA-QGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~-~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++ .|-+- ..+|+.|+++|++|++..-.
T Consensus 8 k~vlVTGa~~s~gIG--~aia~~l~~~G~~V~~~~r~ 42 (269)
T 2h7i_A 8 KRILVSGIITDSSIA--FHIARVAQEQGAQLVLTGFD 42 (269)
T ss_dssp CEEEECCCSSTTSHH--HHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEECCCCCCchH--HHHHHHHHHCCCEEEEEecC
Confidence 567777662 45554 36889999999999987654
No 175
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=53.53 E-value=4.1 Score=37.37 Aligned_cols=48 Identities=23% Similarity=0.263 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEE
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVE 58 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~ 58 (459)
.+|||.++..|+.| ..+|..|++.||+|++...+...+.+.+.|+...
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~g~~~~ 65 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEATGLRLE 65 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHHCEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhCCeEEE
Confidence 46899999988888 4578899999999999944434444544565544
No 176
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=53.46 E-value=8.7 Score=34.74 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=31.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc-cccccCCCCceEE
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY-TVKSIHATTVGVE 58 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~-~~~~~~~~g~~~~ 58 (459)
+|||.|+..|..|. .+|..|.++||+|+++.... ..+.+.+.|+...
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~ 50 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIAD 50 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEE
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEE
Confidence 48999998777774 57889999999999986532 2233333355443
No 177
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=53.42 E-value=85 Score=26.03 Aligned_cols=99 Identities=11% Similarity=-0.006 Sum_probs=56.1
Q ss_pred hhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC--CCCchhhhhhcCCCceEEeeecHH-
Q 012645 257 DQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE--NKLPVEFVNSVGETGLVVRWCNQF- 333 (459)
Q Consensus 257 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~v~v~~~~p~~- 333 (459)
.++-++|..+. ..+|+-|... -.+....++....+-+++=++...- ...+.. .-+..++++.....
T Consensus 34 ~~lg~~la~~g---~~lv~GGG~~----GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~----~~~~~i~~~~~~~Rk 102 (189)
T 3sbx_A 34 GAVGAAIAARG---WTLVWGGGHV----SAMGAVSSAARAHGGWTVGVIPKMLVHRELADH----DADELVVTETMWERK 102 (189)
T ss_dssp HHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCT----TCSEEEEESSHHHHH
T ss_pred HHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEcCchhhhcccCCC----CCCeeEEcCCHHHHH
Confidence 34666776653 4555554421 3667777777777777765554321 111111 11233445555444
Q ss_pred -HHhcccCccceeccCchhhHHHhh---------hcCCeeeccc
Q 012645 334 -EVLAHQAVGCFITHCGWNSILEGL---------SLGVAVVAVP 367 (459)
Q Consensus 334 -~lL~~~~~~~~I~HGG~gs~~eal---------~~GvP~li~P 367 (459)
.++.+++ ..++--||+||.-|.. .+++|++++-
T Consensus 103 ~~m~~~sd-a~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 103 QVMEDRAN-AFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp HHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHHCC-EEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 3344455 4567789999998874 3689998884
No 178
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=53.13 E-value=30 Score=29.85 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=23.2
Q ss_pred CccEEE-eCCCc-hhHHHHHHHcCCceEEEccc
Q 012645 103 PVNCIV-YDSLL-TWALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 103 ~~Dlvi-~D~~~-~~~~~~a~~lgiP~v~~~~~ 133 (459)
.||+|| .|+.. .-+..=|.++|||+|.+.-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 589986 66654 34677788999999998643
No 179
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=52.66 E-value=9.8 Score=33.01 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=29.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.+|||.|+..|..|- .||+.|+++||+|+.....
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 579999999998885 5899999999999877653
No 180
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=52.43 E-value=10 Score=32.75 Aligned_cols=38 Identities=16% Similarity=0.019 Sum_probs=32.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|||.|..-|+-|=..=...||..|+++|++|.++=.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 78888666888899999999999999999998886553
No 181
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=52.40 E-value=37 Score=29.67 Aligned_cols=33 Identities=21% Similarity=0.302 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|.++.| +- ..+|++|+++|++|++..-.
T Consensus 12 k~vlVTGas~g-IG--~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 12 KVVVISGVGPA-LG--TTLARRCAEQGADLVLAART 44 (264)
T ss_dssp CEEEEESCCTT-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEECCCcH-HH--HHHHHHHHHCcCEEEEEeCC
Confidence 67777766543 33 46899999999999887654
No 182
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=52.31 E-value=25 Score=31.17 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=25.5
Q ss_pred EEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 9 HVLVLTYPAQ-GHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 9 kil~~~~~~~-GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|+++++.++. +-+- .++|+.|.++|++|+++.-..
T Consensus 27 k~vlVTGasg~~GIG--~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 27 KKILITGLLSNKSIA--YGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CEEEECCCCSTTCHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCCCCCHH--HHHHHHHHHcCCEEEEeeCch
Confidence 6788887541 1232 578999999999999887654
No 183
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=52.16 E-value=37 Score=28.94 Aligned_cols=106 Identities=10% Similarity=0.088 Sum_probs=0.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEecCc----cccccCCCCceEEEcCCCCCCCCCCCCCCHHHHH
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKR--VKATLATTHY----TVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYL 79 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~G--h~V~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (459)
+++||.++..|+.+- +.+|.+++.+.+ ++|..+.+.. ..+.+++.|+.+..++..--..
T Consensus 7 ~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~~------------ 71 (215)
T 3kcq_A 7 KELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLDI------------ 71 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBCH------------
T ss_pred CCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCCh------------
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccchHHHHHHHHHhhccCCCCCCCCCCC
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNSASVCSMYWQINHGLLTLPVNQETV 158 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 158 (459)
+.+.+.++++ ++|+||.-.+. .....+-+...-.++-+.++.
T Consensus 72 --------~~~~~~L~~~-----~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSL------------------------ 114 (215)
T 3kcq_A 72 --------EHISTVLREH-----DVDLVCLAGFMSILPEKFVTDWHHKIINIHPSL------------------------ 114 (215)
T ss_dssp --------HHHHHHHHHT-----TCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC------------------------
T ss_pred --------HHHHHHHHHh-----CCCEEEEeCCceEeCHHHHhhccCCeEEECccc------------------------
Q ss_pred cccCCCCC
Q 012645 159 PLTLPGLP 166 (459)
Q Consensus 159 ~~~~p~~~ 166 (459)
+|.+.
T Consensus 115 ---LP~yr 119 (215)
T 3kcq_A 115 ---LPSFK 119 (215)
T ss_dssp ---TTTTC
T ss_pred ---ccCCC
No 184
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=51.89 E-value=18 Score=31.08 Aligned_cols=40 Identities=23% Similarity=0.168 Sum_probs=25.5
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|...++.++++ ++ |+.|.+-. .++++|.++||+|+++.-.
T Consensus 1 m~~~~~~~~vl-VT-GasggiG~--~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 1 MKLNFSGLRAL-VT-GAGKGIGR--DTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp --CCCTTCEEE-EE-STTSHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CccCCCCCEEE-Ee-CCCchHHH--HHHHHHHHCCCEEEEEeCC
Confidence 55555566554 44 34454443 6789999999999887653
No 185
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=51.81 E-value=22 Score=24.49 Aligned_cols=49 Identities=20% Similarity=0.121 Sum_probs=35.0
Q ss_pred hcCCeeeccccccchhhH-HH--HHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 358 SLGVAVVAVPQFSDQPTN-AK--FVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 358 ~~GvP~li~P~~~DQ~~n-a~--rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
-+|+|.+++--.+.|.+. -. ...+. |+..-+.+ ..++++|...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvlk----stdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK----STDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE----CCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc----cCCHHHHHHHHHHHHH
Confidence 479999998887777663 22 34456 66655554 5889999998888874
No 186
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=51.14 E-value=97 Score=25.09 Aligned_cols=141 Identities=16% Similarity=0.194 Sum_probs=76.7
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCG 349 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG 349 (459)
|.|-|-+||.. +-...++....++..|..+-+.+.+- -..|+... +++-. ...-.++++|.=.|
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-HR~p~~~~----------~~~~~---a~~~g~~ViIa~AG 70 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA-HRTPKETV----------EFVEN---ADNRGCAVFIAAAG 70 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-TTSHHHHH----------HHHHH---HHHTTEEEEEEEEC
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc-cCCHHHHH----------HHHHH---HHhCCCcEEEEECC
Confidence 46777788865 55678888888999888765555432 22333221 11100 00122334777666
Q ss_pred hh----hHHHhhhcCCeeecccccc-c--hhhHHHHHHH--hhhceEE-eeecCCCcccHHHHHHHHHHHhcChhhHHHH
Q 012645 350 WN----SILEGLSLGVAVVAVPQFS-D--QPTNAKFVEE--VWEVGVR-AKKNRAGIVTGEELNKCVNEVMDGERSQKIK 419 (459)
Q Consensus 350 ~g----s~~eal~~GvP~li~P~~~-D--Q~~na~rv~~--~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 419 (459)
.. ++..++ .-.|+|.+|... + -.+--.-+.+ - |+... +...+.+..++..+...|- -+.|+ .++
T Consensus 71 ~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il-~~~d~---~l~ 144 (169)
T 3trh_A 71 LAAHLAGTIAAH-TLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQII-ALQDK---SIA 144 (169)
T ss_dssp SSCCHHHHHHHT-CSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHH-HTTCH---HHH
T ss_pred hhhhhHHHHHhc-CCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHH-cCCCH---HHH
Confidence 53 444443 358999999753 2 2222333444 3 43211 1111001345555555553 34676 899
Q ss_pred HHHHHHHHHHHHH
Q 012645 420 RNVSKWREFAKKA 432 (459)
Q Consensus 420 ~~a~~l~~~~~~~ 432 (459)
++.+..+++.++.
T Consensus 145 ~kl~~~r~~~~~~ 157 (169)
T 3trh_A 145 QKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888764
No 187
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=51.10 E-value=16 Score=30.76 Aligned_cols=48 Identities=8% Similarity=0.136 Sum_probs=30.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc-cccCCCCceEEEc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV-KSIHATTVGVEPI 60 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~-~~~~~~g~~~~~~ 60 (459)
|||+++ |+.|.+- ..|+++|.++||+|+.++-.... ..+. .+++++..
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~ 49 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQK 49 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEEC
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEec
Confidence 676555 4555555 36789999999999998764322 1122 46666654
No 188
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=50.98 E-value=19 Score=26.87 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
.++|||+++|.++.+--.=.-.+-++..++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 36799999998876544433444455556799988855
No 189
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=50.80 E-value=30 Score=27.25 Aligned_cols=99 Identities=16% Similarity=0.124 Sum_probs=59.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhch
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGS 87 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (459)
.. +|++... .+=.-++.+|+.|.+.||++. ++......+++.|+....+...-..+ + .
T Consensus 25 ~g-vliSv~d-~dK~~l~~~a~~l~~lGf~i~--AT~GTa~~L~~~Gi~v~~v~k~~egg------~------------~ 82 (143)
T 2yvq_A 25 KG-ILIGIQQ-SFRPRFLGVAEQLHNEGFKLF--ATEATSDWLNANNVPATPVAWPSQEG------Q------------N 82 (143)
T ss_dssp SE-EEEECCG-GGHHHHHHHHHHHHTTTCEEE--EEHHHHHHHHHTTCCCEEECCGGGC---------------------
T ss_pred CC-EEEEecc-cchHHHHHHHHHHHHCCCEEE--ECchHHHHHHHcCCeEEEEEeccCCC------c------------c
Confidence 35 5555443 466779999999999999844 33344566777888887774221100 0 0
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCc--------hhHHHHHHHcCCceEEE
Q 012645 88 RTLAEVILKYKDSESPVNCIVYDSLL--------TWALDVARQFGIYGAAM 130 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi~D~~~--------~~~~~~a~~lgiP~v~~ 130 (459)
+.+.++.+.+.+. +.|+||.-.-. +.-..+|-..|||+++-
T Consensus 83 ~~~~~i~d~i~~g--~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 83 PSLSSIRKLIRDG--SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp --CBCHHHHHHTT--SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred cccccHHHHHHCC--CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 0001233333333 89999974322 23456788999999874
No 190
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=50.75 E-value=84 Score=27.26 Aligned_cols=37 Identities=11% Similarity=0.089 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHI-NPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~-~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|||+++-.-+.-++ ..+...++.++.-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 78887776555555 56667888887778888887765
No 191
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=50.28 E-value=34 Score=30.70 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++. -+- ..+|++|.++|++|+++.-.
T Consensus 32 k~vlVTGas~-gIG--~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 32 RAAVVTGGAS-GIG--LATATEFARRGARLVLSDVD 64 (301)
T ss_dssp CEEEEETTTS-HHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCC-HHH--HHHHHHHHHCCCEEEEEECC
Confidence 6777776653 343 46899999999999887654
No 192
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=49.85 E-value=13 Score=35.10 Aligned_cols=60 Identities=23% Similarity=0.328 Sum_probs=39.4
Q ss_pred cHHHHhcccCccceeccCchhhHHHhhhc----CC-eeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHH
Q 012645 331 NQFEVLAHQAVGCFITHCGWNSILEGLSL----GV-AVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKC 405 (459)
Q Consensus 331 p~~~lL~~~~~~~~I~HGG~gs~~eal~~----Gv-P~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~ 405 (459)
+..++-..+++ +|+=||=||++.|+.. ++ |+|.+... -+|- + . .+..+++.++
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G--------------~lGF-L--t---~~~~~~~~~a 164 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG--------------TLGF-L--S---PFDFKEHKKV 164 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS--------------SCCS-S--C---CEEGGGHHHH
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC--------------Cccc-C--C---cCChHHHHHH
Confidence 34455555677 9999999999999654 57 78887632 1111 1 1 3455677777
Q ss_pred HHHHhcC
Q 012645 406 VNEVMDG 412 (459)
Q Consensus 406 i~~ll~~ 412 (459)
+.+++++
T Consensus 165 l~~il~g 171 (388)
T 3afo_A 165 FQEVISS 171 (388)
T ss_dssp HHHHHTT
T ss_pred HHHHhcC
Confidence 7777765
No 193
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=49.72 E-value=96 Score=25.87 Aligned_cols=95 Identities=14% Similarity=0.098 Sum_probs=56.1
Q ss_pred hhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEE--eeecHH-
Q 012645 257 DQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVV--RWCNQF- 333 (459)
Q Consensus 257 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~--~~~p~~- 333 (459)
.++-++|...+ ...|+-|.. -.+....++....+-+++-++..... ...+ ....+. ...+..
T Consensus 48 ~~lg~~LA~~G---~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e~~--~~~~-----~~~~~~~~~~f~~Rk 112 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDEEA--GNPY-----LSVAVKTGLDFQMRS 112 (195)
T ss_dssp HHHHHHHHHTT---CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTTCC--CCTT-----CSEEEECCCCHHHHH
T ss_pred HHHHHHHHHCC---CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCccc--CCCC-----cceeeecCCCHHHHH
Confidence 45677777653 555553433 46666777666667677766654211 1111 223333 345544
Q ss_pred H-HhcccCccceeccCchhhHHH---hhhcCCeeeccc
Q 012645 334 E-VLAHQAVGCFITHCGWNSILE---GLSLGVAVVAVP 367 (459)
Q Consensus 334 ~-lL~~~~~~~~I~HGG~gs~~e---al~~GvP~li~P 367 (459)
. +...++ ..++--||+||..| ++.+++|+++++
T Consensus 113 ~~m~~~sd-a~IvlpGG~GTL~E~~eal~~~kPV~lln 149 (195)
T 1rcu_A 113 FVLLRNAD-VVVSIGGEIGTAIEILGAYALGKPVILLR 149 (195)
T ss_dssp HHHHTTCS-EEEEESCCHHHHHHHHHHHHTTCCEEEET
T ss_pred HHHHHhCC-EEEEecCCCcHHHHHHHHHhcCCCEEEEC
Confidence 3 333444 45677899998765 577999999996
No 194
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=49.52 E-value=28 Score=30.37 Aligned_cols=37 Identities=8% Similarity=0.154 Sum_probs=26.9
Q ss_pred cEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQG-----------HINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~G-----------H~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+|||++.....+ ...=++.-...|++.|++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578777665322 2244777788999999999999975
No 195
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=49.42 E-value=70 Score=26.57 Aligned_cols=102 Identities=15% Similarity=0.018 Sum_probs=59.0
Q ss_pred hhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhh-hhhcCCCceEEeeecHH-H
Q 012645 257 DQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEF-VNSVGETGLVVRWCNQF-E 334 (459)
Q Consensus 257 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~v~v~~~~p~~-~ 334 (459)
.++-++|...+ ...|+-|... -.+....++....+-+++=++... +.+.- .+..-++..+++..+.. .
T Consensus 23 ~~lg~~La~~g---~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~---l~~~e~~~~~~~~~~~~~~~~~Rk~ 92 (191)
T 1t35_A 23 AELGVYMAEQG---IGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSG---LFSGEVVHQNLTELIEVNGMHERKA 92 (191)
T ss_dssp HHHHHHHHHTT---CEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETT---CCHHHHTTCCCSEEEEESHHHHHHH
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCch---hcccccccCCCCccccCCCHHHHHH
Confidence 34667777653 5566665431 356677777777777777665532 21110 00111233445666655 3
Q ss_pred HhcccCccceeccCchhhHHHh---h------hcCCeeecccc
Q 012645 335 VLAHQAVGCFITHCGWNSILEG---L------SLGVAVVAVPQ 368 (459)
Q Consensus 335 lL~~~~~~~~I~HGG~gs~~ea---l------~~GvP~li~P~ 368 (459)
++..-+-..++--||.||.-|. + .+++|++++-.
T Consensus 93 ~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 93 KMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 4433333567889999998765 5 37899999864
No 196
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=49.36 E-value=9.7 Score=34.58 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=27.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 4 QRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 4 ~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.+..|||.|+-.|..|. .+|+.|+++||+|++...
T Consensus 6 ~~~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred ccCCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 34568999998777664 689999999999987743
No 197
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=49.25 E-value=12 Score=34.49 Aligned_cols=40 Identities=10% Similarity=0.162 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCccCHH----HHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHIN----PLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~----p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+||||+++..|.-+--. ....++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 457899888855332222 4567899999999999988653
No 198
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=49.24 E-value=52 Score=28.55 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++.| +- .++|+.|+++|++|+++.-.
T Consensus 7 k~vlVTGas~g-IG--~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 7 KVVIITGGSSG-MG--KGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp CEEEETTTTSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 57778866543 22 56889999999999887654
No 199
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=49.15 E-value=11 Score=35.45 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=25.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
|||+++-.|--| +.+|..|+++||+|+++=
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 899999887666 778999999999999873
No 200
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=49.02 E-value=11 Score=35.01 Aligned_cols=35 Identities=23% Similarity=0.136 Sum_probs=29.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+.+|||.|+-.|..|. .+|..|++.||+|++....
T Consensus 27 ~~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 4468999999988884 5899999999999998764
No 201
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=48.73 E-value=59 Score=28.29 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|++++|.++ |-+- .++|++|+++|++|+++.-.
T Consensus 28 ~k~vlVTGas-~gIG--~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 28 QKVVVITGAS-QGIG--AGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CCEEEESSCS-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4677888654 3333 37889999999999988654
No 202
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=48.61 E-value=19 Score=30.86 Aligned_cols=52 Identities=13% Similarity=0.156 Sum_probs=31.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc-cccCCCCc-eEEEc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV-KSIHATTV-GVEPI 60 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~-~~~~~~g~-~~~~~ 60 (459)
++.|+|++. |+.|.+-. .++++|.++||+|+.++-.... +.+...++ .++..
T Consensus 19 l~~~~ilVt--GatG~iG~--~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~ 72 (236)
T 3e8x_A 19 FQGMRVLVV--GANGKVAR--YLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVA 72 (236)
T ss_dssp --CCEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEEC
T ss_pred cCCCeEEEE--CCCChHHH--HHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEc
Confidence 455776655 44455554 6788999999999998864322 22222455 55544
No 203
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=48.52 E-value=31 Score=30.32 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
-|+++++.++.| +- .++|++|+++|++|.+...
T Consensus 28 ~k~vlVTGas~g-IG--~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG-IG--RAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH-HH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEeC
Confidence 367888876543 33 3688999999999988765
No 204
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=48.43 E-value=51 Score=29.21 Aligned_cols=34 Identities=24% Similarity=0.157 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|+++++.++.| +- .++|++|+++|++|.++.-.
T Consensus 28 ~k~~lVTGas~G-IG--~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 28 SPVALITGAGSG-IG--RATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCEEEEESCSSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 367888866543 33 47889999999999988754
No 205
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=48.40 E-value=29 Score=33.20 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=33.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCcccc
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTVK 48 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~~ 48 (459)
.|+++..++-|-..=...||..|+++ |++|.++..+.+..
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 45555567999999999999999999 99999999886553
No 206
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=48.28 E-value=32 Score=30.15 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=26.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
=|++++|.++.| +- .++|+.|+++|.+|.+..-.
T Consensus 7 gKvalVTGas~G-IG--~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 7 NKVVIVTGAGSG-IG--RAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TCEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH-HH--HHHHHHHHHcCCEEEEEECC
Confidence 378999987766 32 46789999999999887653
No 207
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=48.27 E-value=22 Score=32.83 Aligned_cols=38 Identities=13% Similarity=0.285 Sum_probs=26.2
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHh--CCCeEEEEecC
Q 012645 3 NQRERVHVLVLTYPAQGHINPLLQFAKRLAS--KRVKATLATTH 44 (459)
Q Consensus 3 ~~~~~~kil~~~~~~~GH~~p~~~la~~L~~--~Gh~V~~~~~~ 44 (459)
+.++.|+||+. |+.|-+-. .|+++|.+ +||+|+.+.-.
T Consensus 6 ~~~~~~~vlVT--GatG~IG~--~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 6 DELENQTILIT--GGAGFVGS--NLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCCTTCEEEEE--TTTSHHHH--HHHHHHHHHCTTSEEEEEECC
T ss_pred hhcCCCEEEEE--CCCCHHHH--HHHHHHHhhCCCCeEEEEECC
Confidence 34556666655 44455544 57889999 99999998753
No 208
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=48.18 E-value=1.1e+02 Score=30.06 Aligned_cols=91 Identities=9% Similarity=0.031 Sum_probs=51.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHH-HhCCCeEEEEecCcccc--ccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRL-ASKRVKATLATTHYTVK--SIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L-~~~Gh~V~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
.|++++ |+-.-.+.+++.| .+.|-+|..+++..... .++.. + ..+++... . ..+.
T Consensus 281 Krv~i~-----gd~~~~~~la~~L~~ElGm~vv~~gt~~~~~~~~~~~~-~--~~~~~~v~----i-~~D~--------- 338 (525)
T 3aek_B 281 KRVFIF-----GDGTHVIAAARIAAKEVGFEVVGMGCYNREMARPLRTA-A--AEYGLEAL----I-TDDY--------- 338 (525)
T ss_dssp CEEEEC-----SSHHHHHHHHHHHHHTTCCEEEEEEESCGGGHHHHHHH-H--HHTTCCCE----E-CSCH---------
T ss_pred CEEEEE-----cCchHHHHHHHHHHHHcCCeeEEEecCchhHHHHHHHH-H--HhcCCcEE----E-eCCH---------
Confidence 567765 3345578899999 79999998776642110 00000 0 00000000 0 0111
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEc
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMM 131 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~ 131 (459)
..+.+++++. +||++|.+. ....+|+++|||++.+.
T Consensus 339 ---~el~~~i~~~-----~pDL~ig~~---~~~~~a~~~giP~~~i~ 374 (525)
T 3aek_B 339 ---LEVEKAIEAA-----APELILGTQ---MERNIAKKLGLPCAVIS 374 (525)
T ss_dssp ---HHHHHHHHHH-----CCSEEEECH---HHHHHHHHHTCCEEECS
T ss_pred ---HHHHHHHhhc-----CCCEEEecc---hhHHHHHHcCCCEEEec
Confidence 1234455554 899999983 57778899999999854
No 209
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=48.16 E-value=50 Score=27.71 Aligned_cols=49 Identities=12% Similarity=0.059 Sum_probs=33.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEE
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVE 58 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~ 58 (459)
||+|+.+++.- ..-+....+.|.+.|++|.+++...........|+.+.
T Consensus 11 ~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~g~~~v~~~~G~~v~ 59 (208)
T 3ot1_A 11 RILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVGDKLQVQGSRGVWLT 59 (208)
T ss_dssp EEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESSSCSEEECTTSCEEE
T ss_pred eEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcCCCcceecCCCcEEe
Confidence 78888777654 45566677888899999999998632222333455544
No 210
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=48.15 E-value=7.8 Score=35.30 Aligned_cols=32 Identities=16% Similarity=0.192 Sum_probs=23.9
Q ss_pred HhcccCccceeccCchhhHHHhhhc----CCeeecccc
Q 012645 335 VLAHQAVGCFITHCGWNSILEGLSL----GVAVVAVPQ 368 (459)
Q Consensus 335 lL~~~~~~~~I~HGG~gs~~eal~~----GvP~li~P~ 368 (459)
....+++ +|.-||=||+++++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3334556 9999999999999865 889988874
No 211
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=48.07 E-value=45 Score=29.70 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=25.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|++++|.++.| +- .++|++|+++|++|++..-..
T Consensus 48 k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 48 KNVLITGGDSG-IG--RAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEeCCc
Confidence 67888866543 33 478999999999998887543
No 212
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=47.97 E-value=9.6 Score=35.56 Aligned_cols=40 Identities=0% Similarity=-0.030 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHI----NPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~----~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.||||+++..|-..-- .....++++|.++||+|+.+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 45799998886533322 23477889999999999988654
No 213
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=47.89 E-value=19 Score=31.06 Aligned_cols=37 Identities=5% Similarity=0.042 Sum_probs=30.7
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 6 ERVHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 6 ~~~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
.+||.+|++. ..-|-..-...|++.|+++|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 4687777765 477888889999999999999999963
No 214
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=47.63 E-value=14 Score=35.94 Aligned_cols=49 Identities=18% Similarity=0.236 Sum_probs=37.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPIS 61 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~ 61 (459)
.+++++.- .|=.-++.+|+.|.+.|+++. ++......+++.|+.+..+.
T Consensus 24 i~raLISV----~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e~GI~v~~V~ 72 (534)
T 4ehi_A 24 AMRALLSV----SDKEGIVEFGKELENLGFEIL--STGGTFKLLKENGIKVIEVS 72 (534)
T ss_dssp CCEEEEEE----SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHTTCCCEECB
T ss_pred CcEEEEEE----cccccHHHHHHHHHHCCCEEE--EccHHHHHHHHCCCceeehh
Confidence 35565555 345558999999999999875 66667788888899988876
No 215
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=47.15 E-value=74 Score=31.15 Aligned_cols=88 Identities=13% Similarity=0.087 Sum_probs=54.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHH-HhCCCeEEEEecCcccc------ccCCCCceEEEcCCCCCCCCCCCCCCHHHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRL-ASKRVKATLATTHYTVK------SIHATTVGVEPISDGFDEGGFKQAPSVKAYL 79 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L-~~~Gh~V~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (459)
..|++++. +-.-.+.+++.| .+.|-+|..+++..... .++..+-... + ..+.
T Consensus 303 Gkrv~i~g-----d~~~~~~l~~~L~~elGm~vv~~gt~~~~~~~~~~~~l~~~~~~v~-~-----------~~D~---- 361 (511)
T 2xdq_B 303 GKKAVVFG-----DNTHAAAMTKILSREMGIHVVWAGTYCKYDADWFRAEVAGFCDEVL-I-----------TDDH---- 361 (511)
T ss_dssp TCEEEEEE-----CHHHHHHHHHHHHHHHCCEEEEEEESCGGGHHHHHHHHTTTSSEEE-E-----------CCCH----
T ss_pred CCEEEEEc-----CChHHHHHHHHHHHhCCCEEEEeecCCCCchHHHHHHHHhcCCcEE-E-----------eCCH----
Confidence 35777774 334577899999 78999998876653221 1222111100 0 0111
Q ss_pred HHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEc
Q 012645 80 ESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMM 131 (459)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~ 131 (459)
..+.+++++. +||++|.+ .....+|+++|||++.+.
T Consensus 362 --------~el~~~i~~~-----~pDl~ig~---~~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 362 --------TVVGDAIARV-----EPAAIFGT---QMERHVGKRLNIPCGVIA 397 (511)
T ss_dssp --------HHHHHHHHHH-----CCSEEEEC---HHHHHHHHHHTCCEEECS
T ss_pred --------HHHHHHHHhc-----CCCEEEec---cchHHHHHhcCCCeEecc
Confidence 1344555555 89999988 446778899999999865
No 216
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=46.95 E-value=20 Score=31.94 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=31.5
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+|++.++. |+-|-..=...||..|+++|++|.++=.+.
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 56666654 688999999999999999999999886554
No 217
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=46.51 E-value=17 Score=32.32 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=26.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|.++.| +- .++|+.|++.|.+|.+..-.
T Consensus 30 KvalVTGas~G-IG--~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 30 KIAVITGATSG-IG--LAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp CEEEEESCSSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCcCCH-HH--HHHHHHHHHCCCEEEEEECC
Confidence 79999988765 33 56899999999999887643
No 218
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=46.50 E-value=9.6 Score=32.63 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+.|||.|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 445899999877666 3678999999999988443
No 219
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=46.42 E-value=1.2e+02 Score=24.86 Aligned_cols=143 Identities=14% Similarity=0.192 Sum_probs=72.1
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccC
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHC 348 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HG 348 (459)
-|.|-|-+||.+ +-...++....++..|..+-+-+.+- -..|+...+ ++-.. ..-.++++|.=.
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-HR~p~~l~~----------~~~~a---~~~g~~ViIa~A 76 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA-HRTPDRMFE----------YAKNA---EERGIEVIIAGA 76 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT-TTCHHHHHH----------HHHHT---TTTTCCEEEEEE
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-cCCHHHHHH----------HHHHH---HhCCCcEEEEec
Confidence 357888888865 55667778888888887765555433 233333321 10000 001112255544
Q ss_pred ch----hhHHHhhhcCCeeeccccccc-hhhHHHHHHHhhhc--eEEeeecC-CCcccHHHHHHHHHHHhcChhhHHHHH
Q 012645 349 GW----NSILEGLSLGVAVVAVPQFSD-QPTNAKFVEEVWEV--GVRAKKNR-AGIVTGEELNKCVNEVMDGERSQKIKR 420 (459)
Q Consensus 349 G~----gs~~eal~~GvP~li~P~~~D-Q~~na~rv~~~~G~--G~~~~~~~-~~~~~~~~l~~~i~~ll~~~~~~~~~~ 420 (459)
|. .++..++ .-+|+|.+|.... -.....-+.-. .. |.-+..-. ++..++..++..|- -+.|+ .+++
T Consensus 77 G~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~Id~~~nAa~lAaqIl-a~~d~---~l~~ 150 (183)
T 1o4v_A 77 GGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVATVAINNAKNAGILAASIL-GIKYP---EIAR 150 (183)
T ss_dssp ESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCEECCTTCHHHHHHHHHHHH-HTTCH---HHHH
T ss_pred CcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecCCchHHHHHHHHHH-hcCCH---HHHH
Confidence 43 3444444 5678888886442 11112212222 22 31111100 11556666665554 45666 8888
Q ss_pred HHHHHHHHHHHHH
Q 012645 421 NVSKWREFAKKAV 433 (459)
Q Consensus 421 ~a~~l~~~~~~~~ 433 (459)
+.+..+++....+
T Consensus 151 kL~~~r~~~~~~v 163 (183)
T 1o4v_A 151 KVKEYKERMKREV 163 (183)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888777643
No 220
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=46.36 E-value=10 Score=29.71 Aligned_cols=48 Identities=19% Similarity=0.245 Sum_probs=33.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc-ccccCCCCceEEE
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT-VKSIHATTVGVEP 59 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~-~~~~~~~g~~~~~ 59 (459)
+.||+++.+|..| ..+|+.|.++||+|+++..... .+.+.+.|+.++.
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~ 55 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVL 55 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEE
Confidence 4689998877666 3788999999999999987543 2333345666543
No 221
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.35 E-value=36 Score=30.06 Aligned_cols=32 Identities=25% Similarity=0.235 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|++++|.++.| +- .++|++|+++|++|+++.-
T Consensus 16 k~~lVTGas~g-IG--~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAARG-QG--RSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTSH-HH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcH-HH--HHHHHHHHHCCCEEEEEec
Confidence 67888866543 33 4789999999999998764
No 222
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=46.16 E-value=42 Score=29.72 Aligned_cols=33 Identities=24% Similarity=0.172 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
-|++++|.++.| +- .++|++|+++|++|+++.-
T Consensus 11 ~k~~lVTGas~g-IG--~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG-QG--RSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH-HH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch-HH--HHHHHHHHHCCCeEEEEec
Confidence 367888876654 32 4789999999999988754
No 223
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=46.08 E-value=48 Score=24.98 Aligned_cols=46 Identities=11% Similarity=0.036 Sum_probs=32.2
Q ss_pred CCCcEEEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEecCccccccC
Q 012645 5 RERVHVLVLTYPAQGHI--NPLLQFAKRLASKRVKATLATTHYTVKSIH 51 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~--~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~ 51 (459)
|+|. +++++.+-+|+. .-.+.+|.++.+.||+|.++...+....+.
T Consensus 1 Mkk~-~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~~~~ 48 (119)
T 2d1p_B 1 MKRI-AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLL 48 (119)
T ss_dssp CCCE-EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGGC
T ss_pred CcEE-EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHHHHh
Confidence 3444 344555556665 556889999999999999998887665443
No 224
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=46.05 E-value=84 Score=29.37 Aligned_cols=88 Identities=7% Similarity=-0.043 Sum_probs=56.2
Q ss_pred cEEEEEcCCCcc-CHHHHHHHHHHHHhCCCeEEEEecCccccccCC-CCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh
Q 012645 8 VHVLVLTYPAQG-HINPLLQFAKRLASKRVKATLATTHYTVKSIHA-TTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV 85 (459)
Q Consensus 8 ~kil~~~~~~~G-H~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (459)
.+++++++|+.+ .-.-+..+.++|.+.|.+|++.+.....+.... .++.+..+-
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~------------------------ 276 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEV------------------------ 276 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSC------------------------
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCC------------------------
Confidence 357888999888 555577788999889999999877543322211 233332110
Q ss_pred chHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEE
Q 012645 86 GSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAM 130 (459)
Q Consensus 86 ~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~ 130 (459)
+ ..+++. +.|++|+..-. .+..-|-..|+|.+.+
T Consensus 277 --~-~~~ll~-------~~d~~v~~gG~-~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 277 --N-HQVLFG-------RVAAVVHHGGA-GTTTAVTRAGAPQVVV 310 (404)
T ss_dssp --C-HHHHGG-------GSSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred --C-HHHHHh-------hCcEEEECCcH-HHHHHHHHcCCCEEEc
Confidence 0 122332 46999999654 3555566889999997
No 225
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=46.01 E-value=17 Score=29.13 Aligned_cols=36 Identities=17% Similarity=0.050 Sum_probs=29.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT 46 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~ 46 (459)
-++++++.|+ | +.|++.+++.|.++|.+|+++ ....
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4788887665 3 999999999999999999998 5443
No 226
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=45.95 E-value=19 Score=33.94 Aligned_cols=35 Identities=14% Similarity=0.099 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+.+||+++..+..+ +.+++++++.|++|+++..+
T Consensus 5 ~~~~~ilI~g~g~~~-----~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRGQ-----LGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGGG-----HHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHhH-----HHHHHHHHHCCCEEEEEcCC
Confidence 456899999877643 66999999999999999754
No 227
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=45.66 E-value=35 Score=30.55 Aligned_cols=34 Identities=21% Similarity=0.105 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-|++++|.++.| +- .++|++|+++|++|+++...
T Consensus 28 gk~~lVTGas~G-IG--~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAFITGAARG-QG--RSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEEEESTTSH-HH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEecc
Confidence 367888876543 32 46889999999999987643
No 228
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=45.64 E-value=25 Score=30.80 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+++++.++.| +- ..+|+.|+++|++|+++..
T Consensus 12 k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN-LG--ALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH-HH--HHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch-HH--HHHHHHHHHCCCEEEEEec
Confidence 67888877655 33 5789999999999998754
No 229
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=45.40 E-value=23 Score=32.22 Aligned_cols=34 Identities=18% Similarity=0.172 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+.|||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 45799999888888 56899999999999887543
No 230
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=44.72 E-value=9.1 Score=32.62 Aligned_cols=33 Identities=9% Similarity=0.237 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|||+++..|..| ..+|+.|.++||+|+++....
T Consensus 1 M~iiIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTA-----YYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCH
Confidence 678888754444 368899999999999987643
No 231
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=44.66 E-value=1.3e+02 Score=24.63 Aligned_cols=146 Identities=17% Similarity=0.162 Sum_probs=82.3
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceecc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITH 347 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~H 347 (459)
-+|.|-|-+||.. +-..++...+.|+..+..+-+.+.+- -..|+.+. +| ..-...-.++++|.=
T Consensus 21 mkp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA-HRtp~~l~----------~~---~~~a~~~g~~ViIa~ 84 (181)
T 4b4k_A 21 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA-HRTPDYMF----------EY---AETARERGLKVIIAG 84 (181)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-TTSHHHHH----------HH---HHHTTTTTCCEEEEE
T ss_pred CCccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc-ccChHHHH----------HH---HHHHHhcCceEEEEe
Confidence 3568889999976 55678888999999887765555432 22233221 00 000011122336655
Q ss_pred Cchh----hHHHhhhcCCeeecccccc---chhhHHHHHHHhhhceEEeeecC-C--CcccHHHHHHHHHHHhcChhhHH
Q 012645 348 CGWN----SILEGLSLGVAVVAVPQFS---DQPTNAKFVEEVWEVGVRAKKNR-A--GIVTGEELNKCVNEVMDGERSQK 417 (459)
Q Consensus 348 GG~g----s~~eal~~GvP~li~P~~~---DQ~~na~rv~~~~G~G~~~~~~~-~--~~~~~~~l~~~i~~ll~~~~~~~ 417 (459)
.|.- ++..+ ..-.|+|.+|... +-.+.-.-+.++ =-|+-+-.-. + +..|+.-++..|- -+.|+ +
T Consensus 85 AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQM-P~GvpVaTvaig~~ga~NAallA~qIL-a~~d~---~ 158 (181)
T 4b4k_A 85 AGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQM-PGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHD---D 158 (181)
T ss_dssp ECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHTC-CTTCCCEECCSSHHHHHHHHHHHHHHH-TTTCH---H
T ss_pred ccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHhC-CCCCceEEEecCCccHHHHHHHHHHHH-ccCCH---H
Confidence 4432 44444 3568999999853 455556666666 5565444320 0 1123333444332 24566 8
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 012645 418 IKRNVSKWREFAKKAVSA 435 (459)
Q Consensus 418 ~~~~a~~l~~~~~~~~~~ 435 (459)
++++.+..++..++.+.+
T Consensus 159 l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 159 IHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988888775443
No 232
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=44.63 E-value=18 Score=33.24 Aligned_cols=95 Identities=9% Similarity=0.029 Sum_probs=54.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc--cc------cCCCCceEEEcCCCCCCCCCCCCCCHH
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV--KS------IHATTVGVEPISDGFDEGGFKQAPSVK 76 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~--~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (459)
|.+|+|+++ |+.|.+-. .|+++|.++||+|+.++-.... +. +...++.++..+ +. +
T Consensus 8 M~~~~IlVt--GatG~iG~--~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~D--l~--------d-- 71 (346)
T 3i6i_A 8 SPKGRVLIA--GATGFIGQ--FVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGL--IN--------E-- 71 (346)
T ss_dssp ---CCEEEE--CTTSHHHH--HHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECC--TT--------C--
T ss_pred CCCCeEEEE--CCCcHHHH--HHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEee--cC--------C--
Confidence 556677665 45565554 5788999999999999875411 11 122466666542 11 1
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc------hhHHHHHHHcC-CceEEE
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL------TWALDVARQFG-IYGAAM 130 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~------~~~~~~a~~lg-iP~v~~ 130 (459)
.+.+.+++++. ++|+||.-... .-...+|.+.| ++.+..
T Consensus 72 ----------~~~l~~~~~~~-----~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 ----------QEAMEKILKEH-----EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp ----------HHHHHHHHHHT-----TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred ----------HHHHHHHHhhC-----CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 12334444543 68999875432 12345667778 887764
No 233
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=44.60 E-value=83 Score=26.34 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=55.4
Q ss_pred hhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC--CCCchhhhhhcCCCceEEeeecHH-
Q 012645 257 DQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE--NKLPVEFVNSVGETGLVVRWCNQF- 333 (459)
Q Consensus 257 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~v~v~~~~p~~- 333 (459)
.++-++|..+. ...|+-|... -.+....++....+-+++-++.... ...+.. .-+..++++.....
T Consensus 43 ~~lg~~La~~g---~~lV~GGG~~----GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~----~~~~~i~~~~~~~Rk 111 (199)
T 3qua_A 43 AEVGSSIAARG---WTLVSGGGNV----SAMGAVAQAARAKGGHTVGVIPKALVHRELADV----DAAELIVTDTMRERK 111 (199)
T ss_dssp HHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCT----TSSEEEEESSHHHHH
T ss_pred HHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEeCchhhhccccCC----CCCeeEEcCCHHHHH
Confidence 34666776653 4445554421 3566777777677777765554310 111110 11234455555444
Q ss_pred H-HhcccCccceeccCchhhHHHhhh---------cCCeeeccc
Q 012645 334 E-VLAHQAVGCFITHCGWNSILEGLS---------LGVAVVAVP 367 (459)
Q Consensus 334 ~-lL~~~~~~~~I~HGG~gs~~eal~---------~GvP~li~P 367 (459)
. ++.+++. .++--||.||.-|... +++|++++-
T Consensus 112 ~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 112 REMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp HHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 3 3344554 5677899999888742 589998885
No 234
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=44.50 E-value=4.5 Score=36.85 Aligned_cols=49 Identities=14% Similarity=0.219 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEecCccccccCC-CCceEEE
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASK-----R-VKATLATTHYTVKSIHA-TTVGVEP 59 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~-----G-h~V~~~~~~~~~~~~~~-~g~~~~~ 59 (459)
.+|||.|+..|..|. .+|..|.+. | |+|+++..+...+.+.+ .|+....
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~g~~~~~ 62 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAGGLRVVT 62 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHTSEEEEC
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcCCeEEEe
Confidence 358999998887774 568888888 9 99999876433344444 5766543
No 235
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=44.43 E-value=29 Score=29.66 Aligned_cols=115 Identities=15% Similarity=0.132 Sum_probs=59.9
Q ss_pred CccCHHHHHHHHHHHHhCCCeEEEEecCccccc-cCC----CCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHh---ch-
Q 012645 17 AQGHINPLLQFAKRLASKRVKATLATTHYTVKS-IHA----TTVGVEPISDGFDEGGFKQAPSVKAYLESFKTV---GS- 87 (459)
Q Consensus 17 ~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~-~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~- 87 (459)
+.-++.-...+....+++|-+|.|+++...... +.+ .|-.|+. ..+..+...........++.+... ..
T Consensus 38 T~~~L~~A~~~i~~~~~~~~~iLfVgTk~~~~~~V~~~A~~~g~~yv~--~rWlgG~LTN~~ti~~~i~~l~~le~~~~~ 115 (218)
T 3r8n_B 38 TVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVN--HRWLGGMLTNWKTVRQSIKRLKDLETQSQD 115 (218)
T ss_dssp SGGGTTTHHHHHHHHHHTTCCCCEECCCTTTTTTTTTHHHHSSCCEEC--SSCCSSSSTTTTTTHHHHHHHHHHHTTTSS
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHHcCCeeEC--CccCCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 344455566667777889999999998765443 332 3555543 122222222222222222222111 00
Q ss_pred -----------HHHHHHHHHhhc-------CCCCccEE-EeCCCch-hHHHHHHHcCCceEEEccc
Q 012645 88 -----------RTLAEVILKYKD-------SESPVNCI-VYDSLLT-WALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 88 -----------~~~~~l~~~~~~-------~~~~~Dlv-i~D~~~~-~~~~~a~~lgiP~v~~~~~ 133 (459)
-.+..-.++++. -...||+| |.|+..- -+..=|.++|||+|.+.-+
T Consensus 116 ~~f~~l~Kke~~~~~re~~kl~k~lgGik~m~~~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDT 181 (218)
T 3r8n_B 116 GTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDT 181 (218)
T ss_dssp SSCSSSCTTTTTTTHHHHHHHHSSSSSSSSCSSCCCSCEEEETGGGHHHHHHHHHHTCCCEEECCS
T ss_pred chhhhccHHHHHHHHHHHHHHHHhhccccccccCCCeEEecCcccccHHHHHHHHhCCCEEEEEeC
Confidence 011122222221 11368887 5787653 3666788999999998654
No 236
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=44.39 E-value=1.2e+02 Score=25.71 Aligned_cols=38 Identities=21% Similarity=0.193 Sum_probs=31.9
Q ss_pred cEEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTYP-AQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~~-~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
-.+.+++.+ +.|=..-++.++..+..+|.+|.++.+.-
T Consensus 12 G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred cEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 356777766 99999999999999999999999887543
No 237
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=44.33 E-value=47 Score=29.28 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=25.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|.++.| +- .++|+.|+++|++|+++.-.
T Consensus 11 k~~lVTGas~g-IG--~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGARG-MG--RSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCch-HH--HHHHHHHHHCCCeEEEEeCC
Confidence 67888876644 33 46899999999999888754
No 238
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=44.29 E-value=20 Score=32.80 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.|++++|.++.| +- ..+|++|.++|++|+...-
T Consensus 5 ~k~vlVTGas~G-IG--~aia~~L~~~G~~V~~~~r 37 (324)
T 3u9l_A 5 KKIILITGASSG-FG--RLTAEALAGAGHRVYASMR 37 (324)
T ss_dssp CCEEEESSCSSH-HH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH-HH--HHHHHHHHHCCCEEEEecC
Confidence 467888866543 33 3789999999999987653
No 239
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=44.27 E-value=48 Score=29.19 Aligned_cols=33 Identities=24% Similarity=0.228 Sum_probs=24.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|.++.| +- ..+|+.|+++|++|+++.-.
T Consensus 11 k~vlVTGas~g-IG--~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGARG-QG--RSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCCh-HH--HHHHHHHHHCCCeEEEEccc
Confidence 67888876543 22 47899999999999988643
No 240
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=44.24 E-value=29 Score=30.63 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|++++|.++.| +- .++|++|+++|++|+++.-
T Consensus 12 k~~lVTGas~G-IG--~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAARG-QG--RAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTTSH-HH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCccH-HH--HHHHHHHHHcCCEEEEEec
Confidence 67777766543 33 4689999999999998754
No 241
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=44.06 E-value=41 Score=29.43 Aligned_cols=35 Identities=11% Similarity=0.156 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+.|+++++.++. -+- ..+|+.|+++|++|.+....
T Consensus 24 ~~k~vlITGas~-gIG--~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGMG-GLG--AAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTTS-HHH--HHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCCc-hHH--HHHHHHHHHCCCEEEEEcCC
Confidence 457888886653 333 46789999999999888743
No 242
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=43.98 E-value=1.4e+02 Score=26.05 Aligned_cols=88 Identities=15% Similarity=0.021 Sum_probs=48.1
Q ss_pred CCCcEEEEEcCCCccCH-HHH-HHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 5 RERVHVLVLTYPAQGHI-NPL-LQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~-~p~-~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
|.+.+|.++........ ..+ -.+-+++.++|+++.+.....+. +....
T Consensus 1 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~--------------------------~~~~~---- 50 (297)
T 3rot_A 1 MVRDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPPGAN--------------------------DVPKQ---- 50 (297)
T ss_dssp --CCEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCSSSC--------------------------CHHHH----
T ss_pred CceEEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCCCcC--------------------------CHHHH----
Confidence 45678888775542222 222 33456667789998877643110 11111
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCCCchh----HHHHHHHcCCceEEEcc
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDSLLTW----ALDVARQFGIYGAAMMT 132 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~----~~~~a~~lgiP~v~~~~ 132 (459)
...++.++.. ++|.||....... ....+...|||+|.+..
T Consensus 51 ----~~~i~~l~~~------~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 51 ----VQFIESALAT------YPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp ----HHHHHHHHHT------CCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred ----HHHHHHHHHc------CCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 1223334443 7899886554322 34456677999999864
No 243
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=43.81 E-value=25 Score=34.45 Aligned_cols=42 Identities=12% Similarity=0.047 Sum_probs=35.6
Q ss_pred CcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEecCcccc
Q 012645 7 RVHVLVLTYP---AQGHINPLLQFAKRLASKRVKATLATTHYTVK 48 (459)
Q Consensus 7 ~~kil~~~~~---~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~ 48 (459)
+||.+|+|.| +.|-=.-.-.|+..|++||++|+..--+.+..
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpyln 46 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYIN 46 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCccee
Confidence 4799999987 66666778899999999999999998776664
No 244
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=43.51 E-value=18 Score=30.63 Aligned_cols=49 Identities=12% Similarity=0.047 Sum_probs=31.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc-cccCCCCceEEEc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV-KSIHATTVGVEPI 60 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~-~~~~~~g~~~~~~ 60 (459)
|||+++ |+.|.+- ..|+++|.++||+|+.++-.... ..+...+++++..
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~ 50 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVK 50 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEEC
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecccccccccCCCceEEec
Confidence 675554 4555555 46789999999999998764322 2223356666654
No 245
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=43.47 E-value=53 Score=25.72 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=31.4
Q ss_pred CcEEEEE-cCCCccCHHH--HHHHHHHHHhCCCeE-EEEecCccccccC
Q 012645 7 RVHVLVL-TYPAQGHINP--LLQFAKRLASKRVKA-TLATTHYTVKSIH 51 (459)
Q Consensus 7 ~~kil~~-~~~~~GH~~p--~~~la~~L~~~Gh~V-~~~~~~~~~~~~~ 51 (459)
.||++|+ +.+-+|.-.. .+.+|+++.+.||+| .++...+......
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a~ 60 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNAN 60 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHHh
Confidence 3777544 4556665554 567799999999999 8887776655443
No 246
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=43.41 E-value=44 Score=24.84 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=28.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|...++++||+++- .|-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSSLGATTVLAAD 39 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhCCceEEEeCC
Confidence 66667889999986 4555567788889989999876543
No 247
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=43.39 E-value=48 Score=28.60 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.+.|.++++.++.| +- ..+|++|+++|++|++...
T Consensus 11 ~~~k~vlITGas~g-iG--~~ia~~l~~~G~~v~~~~~ 45 (256)
T 3ezl_A 11 MSQRIAYVTGGMGG-IG--TSICQRLHKDGFRVVAGCG 45 (256)
T ss_dssp --CEEEEETTTTSH-HH--HHHHHHHHHTTEEEEEEEC
T ss_pred CCCCEEEEECCCCh-HH--HHHHHHHHHCCCEEEEEeC
Confidence 34678888876543 33 4789999999999988773
No 248
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=43.23 E-value=31 Score=29.06 Aligned_cols=34 Identities=6% Similarity=0.101 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
..|||.++..|..| ..+|+.|.++||+|++....
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 45899998877666 46788999999999988543
No 249
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=43.00 E-value=52 Score=28.60 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=25.5
Q ss_pred EEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQ-GHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~-GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++. |-+- ..+|++|+++|++|+++...
T Consensus 21 k~vlITGas~~~giG--~~~a~~l~~~G~~v~~~~~~ 55 (267)
T 3gdg_A 21 KVVVVTGASGPKGMG--IEAARGCAEMGAAVAITYAS 55 (267)
T ss_dssp CEEEETTCCSSSSHH--HHHHHHHHHTSCEEEECBSS
T ss_pred CEEEEECCCCCCChH--HHHHHHHHHCCCeEEEEeCC
Confidence 6778887652 4454 47899999999999887654
No 250
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=42.62 E-value=19 Score=32.00 Aligned_cols=32 Identities=16% Similarity=0.106 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|||.|+..|..|. .+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCCEEEEEcC
Confidence 6888888777663 6889999999999998654
No 251
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=42.51 E-value=25 Score=32.36 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=34.6
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 6 ERVHVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 6 ~~~kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+.++|+|++. |+-|-..-...+|..|+++|++|.++..+.
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3467777765 799999999999999999999999999874
No 252
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=42.37 E-value=27 Score=30.05 Aligned_cols=37 Identities=0% Similarity=-0.061 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.+.|.++++.++.| +- ..+|+.|.++|++|+++.-.
T Consensus 4 ~~~~k~vlVTGas~g-IG--~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 4 SGEARRVLVYGGRGA-LG--SRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp --CCCEEEEETTTSH-HH--HHHHHHHHTTTCEEEEEESS
T ss_pred cCCCCEEEEECCCcH-HH--HHHHHHHHhCCCEEEEEeCC
Confidence 345567777755443 33 46899999999999987654
No 253
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=42.35 E-value=18 Score=32.84 Aligned_cols=23 Identities=4% Similarity=-0.152 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCeEEEEecCcc
Q 012645 24 LLQFAKRLASKRVKATLATTHYT 46 (459)
Q Consensus 24 ~~~la~~L~~~Gh~V~~~~~~~~ 46 (459)
=.++|+++.++|++|+|++.+..
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHCCCEEEEEecCCC
Confidence 35789999999999999998643
No 254
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=42.35 E-value=35 Score=28.62 Aligned_cols=48 Identities=8% Similarity=0.176 Sum_probs=30.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPI 60 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~ 60 (459)
|||+++ |+.|-+- ..++++|.++||+|+.++-...... ...++.++..
T Consensus 1 M~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~~~~~-~~~~~~~~~~ 48 (219)
T 3dqp_A 1 MKIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKVEQVP-QYNNVKAVHF 48 (219)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSGGGSC-CCTTEEEEEC
T ss_pred CeEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCccchh-hcCCceEEEe
Confidence 576655 4445555 4788999999999999886543211 1145666554
No 255
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=41.79 E-value=24 Score=27.73 Aligned_cols=35 Identities=14% Similarity=-0.003 Sum_probs=28.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
-++++++.|+ =+.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4788887665 3899999999999999999998 543
No 256
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=41.43 E-value=63 Score=28.82 Aligned_cols=82 Identities=20% Similarity=0.096 Sum_probs=53.3
Q ss_pred hCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCC
Q 012645 33 SKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSL 112 (459)
Q Consensus 33 ~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~ 112 (459)
....+..+++++.+..+.+..|++.+.+... ..+ ...+ ...+.++++.+++. +..+|+++..
T Consensus 176 ~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~-~~~---~eps------------~~~l~~l~~~ik~~--~v~~if~e~~ 237 (286)
T 3gi1_A 176 KVRSKTFVTQHTAFSYLAKRFGLKQLGISGI-SPE---QEPS------------PRQLKEIQDFVKEY--NVKTIFAEDN 237 (286)
T ss_dssp TCSCCEEEEEESCCHHHHHHTTCEEEEEECS-CC------CC------------HHHHHHHHHHHHHT--TCCEEEECTT
T ss_pred cCCCCEEEEECCchHHHHHHCCCeEeecccc-CCC---CCCC------------HHHHHHHHHHHHHc--CCCEEEEeCC
Confidence 3345566777888888888899998876421 111 0111 23445555555555 7889999887
Q ss_pred ch--hHHHHHHHcCCceEEEcc
Q 012645 113 LT--WALDVARQFGIYGAAMMT 132 (459)
Q Consensus 113 ~~--~~~~~a~~lgiP~v~~~~ 132 (459)
+. .+..+|+..|++.+.+.+
T Consensus 238 ~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 238 VNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp SCTHHHHHHHHTTTCEEEECCC
T ss_pred CChHHHHHHHHHhCCeEEEecc
Confidence 64 356789999999987643
No 257
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=41.38 E-value=21 Score=31.14 Aligned_cols=40 Identities=18% Similarity=0.193 Sum_probs=32.1
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 6 ERVHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 6 ~~~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
++||++.++. |+-|-..=.+.||..|+++|++|.++=.+.
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4677777664 678888889999999999999999986553
No 258
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=41.38 E-value=28 Score=30.49 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=25.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|+++++.++.| +- .++|++|+++|++|+++.-..
T Consensus 28 k~vlVTGas~g-IG--~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 28 APILITGASQR-VG--LHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCEEESSTTSH-HH--HHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEeCCh
Confidence 56777866543 33 468899999999999887543
No 259
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=41.21 E-value=33 Score=28.39 Aligned_cols=38 Identities=21% Similarity=0.315 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQ-FAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~-la~~L~~~Gh~V~~~~~~ 44 (459)
.|||+++.+...|+..-+.. +++.|.+.|++|.++--.
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 36888877766787666554 567777789999877544
No 260
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=41.13 E-value=1.1e+02 Score=26.18 Aligned_cols=33 Identities=15% Similarity=-0.026 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.++++.++ |-+- ..+|++|+++|++|+++.-.
T Consensus 8 k~vlVTGas-~giG--~~ia~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTGAG-KGIG--YATALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEESTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEeCc
Confidence 456666544 4343 36789999999999987654
No 261
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=41.07 E-value=1.4e+02 Score=24.19 Aligned_cols=146 Identities=18% Similarity=0.210 Sum_probs=78.7
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccC
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHC 348 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HG 348 (459)
++.|-|-+||.. +....++....++..|..+-+.+.+- -..|+...+ ++ .=...-.++++|.=.
T Consensus 12 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa-HR~p~~~~~----------~~---~~a~~~g~~ViIa~A 75 (174)
T 3kuu_A 12 GVKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA-HRTPDRLFS----------FA---EQAEANGLHVIIAGN 75 (174)
T ss_dssp CCCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-TTCHHHHHH----------HH---HHTTTTTCSEEEEEE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc-cCCHHHHHH----------HH---HHHHhCCCcEEEEEC
Confidence 346777778765 55678888888999888765555432 223332210 00 000011233377665
Q ss_pred chh----hHHHhhhcCCeeecccccc-c--hhhHHHHHHHh-hhc--eEEeeecCCCcccHHHHHHHHHHHhcChhhHHH
Q 012645 349 GWN----SILEGLSLGVAVVAVPQFS-D--QPTNAKFVEEV-WEV--GVRAKKNRAGIVTGEELNKCVNEVMDGERSQKI 418 (459)
Q Consensus 349 G~g----s~~eal~~GvP~li~P~~~-D--Q~~na~rv~~~-~G~--G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 418 (459)
|.. ++..++ .-+|+|.+|... + -.+--.-+.++ -|+ +.....+ .+..++..+...|- -+.|+ .+
T Consensus 76 G~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~-a~~~nAa~lAa~IL-a~~d~---~l 149 (174)
T 3kuu_A 76 GGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGK-AGAANAALLAAQIL-ALHDT---EL 149 (174)
T ss_dssp ESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSH-HHHHHHHHHHHHHH-HTTCH---HH
T ss_pred ChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCC-ccchHHHHHHHHHH-cCCCH---HH
Confidence 553 444444 358999999743 2 22222333332 032 2222110 01345555655553 34677 99
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 012645 419 KRNVSKWREFAKKAVSAG 436 (459)
Q Consensus 419 ~~~a~~l~~~~~~~~~~~ 436 (459)
+++.++++++.++.+.+.
T Consensus 150 ~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 150 AGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999988765443
No 262
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=41.00 E-value=19 Score=33.83 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++|+|+++..|-.| +..|..|+++||+|+++-..
T Consensus 1 m~~~~v~iiG~G~~G-----l~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAGFSG-----AVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHHCCCcEEEEEec
Confidence 456899998877443 56789999999999999754
No 263
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=41.00 E-value=26 Score=34.88 Aligned_cols=55 Identities=5% Similarity=-0.074 Sum_probs=42.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccc----cCCCCceEEEc
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKS----IHATTVGVEPI 60 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~----~~~~g~~~~~~ 60 (459)
.+.|||+.+.++..|-....-++..|..+|++|+.++...-.+. +...+.+.+-+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~~~~~diVgL 155 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGL 155 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHHHHHTCSEEEE
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEE
Confidence 36799999999999999999999999999999999987543322 22235555544
No 264
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=40.89 E-value=49 Score=28.60 Aligned_cols=38 Identities=8% Similarity=-0.000 Sum_probs=27.8
Q ss_pred cEEEEEcCCCc---c--------CHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTYPAQ---G--------HINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~~~~---G--------H~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+||+++..... + ...=+....+.|.+.|++|+++++..
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 47887776422 1 34567777888999999999999764
No 265
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=40.84 E-value=93 Score=28.83 Aligned_cols=88 Identities=11% Similarity=0.022 Sum_probs=56.5
Q ss_pred cEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEecCccccccCC--CCceEEEcCCCCCCCCCCCCCCHHHHHHH
Q 012645 8 VHVLVLTYPAQG----HINPLLQFAKRLASKRVKATLATTHYTVKSIHA--TTVGVEPISDGFDEGGFKQAPSVKAYLES 81 (459)
Q Consensus 8 ~kil~~~~~~~G----H~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (459)
.++++++.|+.+ ...-+..+.++|.+.+.+|++.+.....+.++. .++.+..+- .
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~------------~------- 292 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWT------------P------- 292 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESSC------------C-------
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEccC------------C-------
Confidence 467888888873 344578889999888999999988765443332 133332110 0
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEE
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAM 130 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~ 130 (459)
+.+++. ..|++|+.... .+..=|-..|+|.|.+
T Consensus 293 --------~~~ll~-------~ad~~v~~~G~-~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 293 --------LHTLLR-------TCTAVVHHGGG-GTVMTAIDAGIPQLLA 325 (398)
T ss_dssp --------HHHHHT-------TCSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred --------HHHHHh-------hCCEEEECCCH-HHHHHHHHhCCCEEEc
Confidence 112333 46999987553 3555666889999996
No 266
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=40.62 E-value=33 Score=30.63 Aligned_cols=38 Identities=11% Similarity=-0.069 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQ-GHIN---PLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~-GH~~---p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+|||+++..|.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478988876532 2322 3457999999999999988765
No 267
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=40.58 E-value=1.5e+02 Score=24.15 Aligned_cols=140 Identities=11% Similarity=0.096 Sum_probs=76.9
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccC
Q 012645 269 KSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHC 348 (459)
Q Consensus 269 ~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HG 348 (459)
++.|-|-+||.. +-...++....++..|..+-+.+.+- -..|+... +++-. ...-.++++|.=.
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa-HR~p~~~~----------~~~~~---a~~~g~~ViIa~A 70 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA-HRTPEAMF----------SYARG---AAARGLEVIIAGA 70 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-TTCHHHHH----------HHHHH---HHHHTCCEEEEEE
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC-CCCHHHHH----------HHHHH---HHhCCCCEEEEec
Confidence 346777778765 55677888888898887765554432 22333221 11100 0011223377665
Q ss_pred chh----hHHHhhhcCCeeeccccccc---hhhHHHHHHHh-hh--ceEEeeecCCCcccHHHHHHHHHHHhcChhhHHH
Q 012645 349 GWN----SILEGLSLGVAVVAVPQFSD---QPTNAKFVEEV-WE--VGVRAKKNRAGIVTGEELNKCVNEVMDGERSQKI 418 (459)
Q Consensus 349 G~g----s~~eal~~GvP~li~P~~~D---Q~~na~rv~~~-~G--~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 418 (459)
|.. ++..++ .-.|+|.+|...- -.+--.-+.++ -| ++...... ..++..+...|- -+.|+ .+
T Consensus 71 G~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~---~~nAa~lAa~Il-~~~d~---~l 142 (174)
T 3lp6_A 71 GGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGG---AGNAGLLAVRML-GAANP---QL 142 (174)
T ss_dssp ESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTC---HHHHHHHHHHHH-HTTCH---HH
T ss_pred CchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCc---chHHHHHHHHHH-hCCCH---HH
Confidence 553 444444 5689999997532 22222233333 03 22222112 566666666664 34566 89
Q ss_pred HHHHHHHHHHHHHH
Q 012645 419 KRNVSKWREFAKKA 432 (459)
Q Consensus 419 ~~~a~~l~~~~~~~ 432 (459)
+++.+.++++.++.
T Consensus 143 ~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 143 RARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888764
No 268
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=40.51 E-value=23 Score=30.39 Aligned_cols=40 Identities=13% Similarity=0.092 Sum_probs=32.4
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhC-CCeEEEEecCc
Q 012645 6 ERVHVLVLTY--PAQGHINPLLQFAKRLASK-RVKATLATTHY 45 (459)
Q Consensus 6 ~~~kil~~~~--~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~ 45 (459)
++||++.++. |+-|-..=.+.||..|+++ |++|.++-.+.
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 4577766654 6889999999999999998 99999997653
No 269
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=40.47 E-value=65 Score=25.56 Aligned_cols=40 Identities=15% Similarity=0.014 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCCCeEEEEecCccc--------cccCCCCceEEEcCC
Q 012645 23 PLLQFAKRLASKRVKATLATTHYTV--------KSIHATTVGVEPISD 62 (459)
Q Consensus 23 p~~~la~~L~~~Gh~V~~~~~~~~~--------~~~~~~g~~~~~~~~ 62 (459)
|....++.|++.|.+|.+....... +.+++.|..+..+|-
T Consensus 28 p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~ 75 (157)
T 3gxh_A 28 PNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPV 75 (157)
T ss_dssp CCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCC
T ss_pred CCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecC
Confidence 3467899999999999886443221 123335888888874
No 270
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=40.32 E-value=28 Score=31.84 Aligned_cols=33 Identities=6% Similarity=-0.024 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.+||.|+..|+.| +-.+|+.|.++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 3689999999888 55699999999999998643
No 271
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=40.29 E-value=62 Score=28.23 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.++++.++ |-+- ..+|+.|+++|++|+++.-.
T Consensus 9 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 9 KVVIVTGAS-MGIG--RAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp CEEEEESCS-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEecC
Confidence 566666544 3333 46799999999999987654
No 272
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=40.15 E-value=26 Score=30.95 Aligned_cols=48 Identities=13% Similarity=0.058 Sum_probs=32.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc-cccCCCCceEEEc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV-KSIHATTVGVEPI 60 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~-~~~~~~g~~~~~~ 60 (459)
|||+++. + |.+-. .|+++|.++||+|+.++-.... ..+...+++++..
T Consensus 6 ~~ilVtG--a-G~iG~--~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~ 54 (286)
T 3ius_A 6 GTLLSFG--H-GYTAR--VLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLW 54 (286)
T ss_dssp CEEEEET--C-CHHHH--HHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEES
T ss_pred CcEEEEC--C-cHHHH--HHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEe
Confidence 6776663 6 77775 5688999999999999865332 2233357777655
No 273
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=39.93 E-value=95 Score=26.08 Aligned_cols=48 Identities=10% Similarity=0.010 Sum_probs=34.0
Q ss_pred hhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 012645 256 GDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLW 303 (459)
Q Consensus 256 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~ 303 (459)
.+.+.+|+.....+.++||..+|......+....+.++++++|..+.+
T Consensus 15 ~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 15 VPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 344566764434566999998876544456778899999999987654
No 274
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=39.90 E-value=29 Score=30.22 Aligned_cols=38 Identities=18% Similarity=0.125 Sum_probs=30.7
Q ss_pred CCCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 5 RERVHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 5 ~~~~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
++++|.+|++. ..-|=..-.+.|++.|+++|++|.++=
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 55667777775 467788889999999999999999984
No 275
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=39.85 E-value=63 Score=28.36 Aligned_cols=34 Identities=26% Similarity=0.268 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-|++++|.++.| +- .++|++|+++|++|.+....
T Consensus 31 gk~~lVTGas~G-IG--~aia~~la~~G~~V~~~~~~ 64 (271)
T 3v2g_A 31 GKTAFVTGGSRG-IG--AAIAKRLALEGAAVALTYVN 64 (271)
T ss_dssp TCEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 367788866543 22 47899999999999888543
No 276
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=39.80 E-value=37 Score=29.84 Aligned_cols=33 Identities=27% Similarity=0.343 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
-|++++|.++.| +- .++|++|+++|++|++...
T Consensus 27 ~k~~lVTGas~G-IG--~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 27 NKVAIVTGASRG-IG--AAIAARLASDGFTVVINYA 59 (267)
T ss_dssp CCEEEEESCSSH-HH--HHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCH-HH--HHHHHHHHHCCCEEEEEcC
Confidence 477888866543 32 4788999999999998744
No 277
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=39.68 E-value=26 Score=31.82 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+.|+|++. |+.|.+-. .|+++|.++||+|+.+.-.
T Consensus 2 ~~~~vlVt--GatG~iG~--~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALIT--GIRGQDGA--YLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp -CCEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEE--CCCChHHH--HHHHHHHHCCCEEEEEECC
Confidence 34666554 44555553 5788999999999988654
No 278
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=39.67 E-value=48 Score=29.16 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-|+++++.++.| +- .++|+.|+++|++|+++.-.
T Consensus 6 ~k~~lVTGas~G-IG--~aia~~la~~G~~V~~~~r~ 39 (274)
T 3e03_A 6 GKTLFITGASRG-IG--LAIALRAARDGANVAIAAKS 39 (274)
T ss_dssp TCEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEECCCCh-HH--HHHHHHHHHCCCEEEEEecc
Confidence 367777766543 33 36789999999999888754
No 279
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=39.10 E-value=53 Score=28.58 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=25.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.+++|.++.| +- .++|+.|+++|++|.+....
T Consensus 3 K~vlVTGas~G-IG--~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG-IG--KQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 67888877665 32 47899999999999887654
No 280
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=39.06 E-value=9.3 Score=37.08 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|||+++..|-.|. .||+.|.+.||+|+++=..
T Consensus 3 ~M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGG-----TLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHH-----HHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHHH-----HHHHHHHHCCCCEEEEECC
Confidence 59999999887774 5899999999999988654
No 281
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=39.01 E-value=68 Score=28.13 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+++++.++.| +- ..+|++|+++|++|++..-
T Consensus 27 k~~lVTGas~g-IG--~aia~~la~~G~~V~~~~r 58 (271)
T 4ibo_A 27 RTALVTGSSRG-LG--RAMAEGLAVAGARILINGT 58 (271)
T ss_dssp CEEEETTCSSH-HH--HHHHHHHHHTTCEEEECCS
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEeC
Confidence 67888866543 33 4689999999999887654
No 282
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=38.99 E-value=41 Score=29.13 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=26.5
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|...++.. .++++.++ |-+- ..+|+.|.++|++|+++.-.
T Consensus 1 m~~~~~~k-~vlITGas-ggiG--~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 1 MQNRLRSA-LALVTGAG-SGIG--RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CCCCCTTC-EEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CccccCCC-EEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 55554444 55666443 3343 46899999999999988654
No 283
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=38.95 E-value=1.5e+02 Score=25.90 Aligned_cols=33 Identities=12% Similarity=0.141 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++ |-+- ..+|++|+++|++|+++.-.
T Consensus 30 k~vlVTGas-~gIG--~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 30 RIALVTGGS-RGIG--QMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEeCCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 567777554 3333 36789999999999887643
No 284
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=38.84 E-value=19 Score=32.46 Aligned_cols=33 Identities=21% Similarity=0.131 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.+||.|+-.|..|+ .||..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 35899998888886 4788999999999877543
No 285
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=38.80 E-value=20 Score=33.38 Aligned_cols=40 Identities=8% Similarity=0.063 Sum_probs=29.2
Q ss_pred CCCcEEEEEcCCCccCHH----HHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHIN----PLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~----p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+||||.++..|--+--. .-..++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 568999998877444433 3347888998899999988754
No 286
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=38.79 E-value=28 Score=35.45 Aligned_cols=95 Identities=11% Similarity=-0.007 Sum_probs=53.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc-----------cccCCCCceEEEcCCCCCCCCCCCCCCHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV-----------KSIHATTVGVEPISDGFDEGGFKQAPSVK 76 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (459)
|||+|+..+.+| ...-++|.++||+|..+.+.... +.+++.|+.+..... ...
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~---------~~~-- 64 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDN---------VNH-- 64 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC--------CCHHHHHHHHTCCEECCSC---------TTS--
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHHcCCCEeccCC---------CCc--
Confidence 788888765443 22356677779999888764322 122224665543321 000
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc-hhHHHHHHHcCCceEEEccch
Q 012645 77 AYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL-TWALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~-~~~~~~a~~lgiP~v~~~~~~ 134 (459)
+.+.+.++++ +||+||+=.+. .....+-+.....++-+.++.
T Consensus 65 -----------~~~~~~l~~~-----~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 65 -----------PLWVERIAQL-----SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp -----------HHHHHHHHHH-----CCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred -----------HHHHHHHHhc-----CCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 1223344555 89999976543 334445555566677777654
No 287
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=38.77 E-value=1.2e+02 Score=22.55 Aligned_cols=38 Identities=11% Similarity=0.040 Sum_probs=29.7
Q ss_pred CCCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEe
Q 012645 5 RERVHVLVLTYPAQGHINP-LLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p-~~~la~~L~~~Gh~V~~~~ 42 (459)
.+++||+++|..+.|.-.= .-.|-+.+.+.|.++.+-.
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3456899999999999874 6777888888999864443
No 288
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=38.77 E-value=29 Score=34.69 Aligned_cols=45 Identities=22% Similarity=0.117 Sum_probs=36.6
Q ss_pred CCCCCCCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 1 MENQRERVHVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 1 m~~~~~~~kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|.+..+.+||+|++. |+-|-..=...||..|+++|++|.++..+.
T Consensus 1 ~~~~~~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 1 MQFLQNIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp CGGGSSCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCCCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 444334567777765 789999999999999999999999999874
No 289
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=38.64 E-value=21 Score=33.18 Aligned_cols=35 Identities=9% Similarity=0.153 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++|||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 456899999877666 36789999999999987543
No 290
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=38.60 E-value=37 Score=29.46 Aligned_cols=33 Identities=27% Similarity=0.271 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.|++++|.++.| +- .++|++|+++|++|+++.-
T Consensus 9 ~k~vlVTGas~g-IG--~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 9 DAVAVVTGGASG-LG--LATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp -CEEEEETTTSH-HH--HHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEeCCCCH-HH--HHHHHHHHHCCCEEEEEeC
Confidence 367777766543 32 3789999999999998875
No 291
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=38.30 E-value=39 Score=29.90 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.|+++++.++.| +- .++|+.|+++|++|+++..
T Consensus 29 ~k~~lVTGas~G-IG--~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG-IG--LGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH-HH--HHHHHHHHHCCCeEEEEeC
Confidence 367888866543 33 4689999999999998874
No 292
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=38.25 E-value=42 Score=29.30 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=27.1
Q ss_pred cEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQ----------G-HINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~----------G-H~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+|||++-.... | ...=++.--..|++.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46777665531 1 2455777788999999999999975
No 293
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=38.05 E-value=31 Score=31.13 Aligned_cols=67 Identities=13% Similarity=0.261 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhh-----
Q 012645 284 ANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLS----- 358 (459)
Q Consensus 284 ~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~----- 358 (459)
...+..+...++..+..+.+......+ ....+ +- ++....++ +|.-||-||+.|++.
T Consensus 25 ~~~~~~i~~~l~~~~~~~~~~~t~~~~-~a~~~-------------~~--~~~~~~d~--vv~~GGDGTl~~v~~~l~~~ 86 (304)
T 3s40_A 25 HTNLTKIVPPLAAAFPDLHILHTKEQG-DATKY-------------CQ--EFASKVDL--IIVFGGDGTVFECTNGLAPL 86 (304)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEECCSTT-HHHHH-------------HH--HHTTTCSE--EEEEECHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCeEEEEEccCcc-hHHHH-------------HH--HhhcCCCE--EEEEccchHHHHHHHHHhhC
Confidence 355667777888777776665432211 00000 00 11222444 999999999999864
Q ss_pred -cCCeeecccc
Q 012645 359 -LGVAVVAVPQ 368 (459)
Q Consensus 359 -~GvP~li~P~ 368 (459)
.++|+.++|.
T Consensus 87 ~~~~~l~iiP~ 97 (304)
T 3s40_A 87 EIRPTLAIIPG 97 (304)
T ss_dssp SSCCEEEEEEC
T ss_pred CCCCcEEEecC
Confidence 5789999996
No 294
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=37.93 E-value=28 Score=31.22 Aligned_cols=38 Identities=3% Similarity=-0.003 Sum_probs=28.6
Q ss_pred cEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTYPAQGH---INPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~~~~GH---~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|||++++.+.... ......++++|.++||+|.++....
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~~ 42 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGD 42 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchhH
Confidence 6999999874221 2345679999999999999987653
No 295
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.73 E-value=60 Score=27.81 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=23.6
Q ss_pred ccceeccCchhhHHHhhhcCCeeeccccc
Q 012645 341 VGCFITHCGWNSILEGLSLGVAVVAVPQF 369 (459)
Q Consensus 341 ~~~~I~HGG~gs~~eal~~GvP~li~P~~ 369 (459)
++.+|+.||.......- .++|+|-++..
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCC
Confidence 44599999999999976 57999999874
No 296
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=37.71 E-value=21 Score=32.62 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+.+||.|+..|..|. .+|..|+++||+|++.-..
T Consensus 4 ~~~~kI~vIGaG~MG~-----~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGR-----SWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHHH-----HHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 5567899998888774 6789999999999987543
No 297
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=37.59 E-value=94 Score=27.56 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-|+++++.++.| +- .++|++|+++|++|++....
T Consensus 49 ~k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDSG-IG--RAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTSH-HH--HHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 367888866543 33 47899999999999887654
No 298
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=37.54 E-value=19 Score=35.29 Aligned_cols=36 Identities=17% Similarity=0.339 Sum_probs=28.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
..|.||+++-.|.-| +.+|+.|.++|++||++...+
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 356799999876555 578999999999999998754
No 299
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=37.53 E-value=1.7e+02 Score=23.99 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhc--
Q 012645 282 IAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSL-- 359 (459)
Q Consensus 282 ~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~-- 359 (459)
..++.+..+.+..+.-+.++++...+....||.-+-..+.--|+-++ ...+ +-+|..+....+..
T Consensus 52 R~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP----------~~~~---~l~G~dsLlSivqmP~ 118 (183)
T 1o4v_A 52 RTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMVASITHLPVIGVP----------VKTS---TLNGLDSLFSIVQMPG 118 (183)
T ss_dssp TCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSSCEEEEE----------ECCT---TTTTHHHHHHHHTCCT
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEecCcccccHHHHHhccCCCEEEee----------CCCC---CCCcHHHHHHHhcCCC
Confidence 45677777887777778888888877766676544333333333222 1111 45788888888888
Q ss_pred CCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhc
Q 012645 360 GVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMD 411 (459)
Q Consensus 360 GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 411 (459)
|+|+-++ ..|-..||..+... +. .++...|.+.+++.-.
T Consensus 119 GvpVatV--~Id~~~nAa~lAaq------Il-----a~~d~~l~~kL~~~r~ 157 (183)
T 1o4v_A 119 GVPVATV--AINNAKNAGILAAS------IL-----GIKYPEIARKVKEYKE 157 (183)
T ss_dssp TCCCEEC--CTTCHHHHHHHHHH------HH-----HTTCHHHHHHHHHHHH
T ss_pred CCeeEEE--ecCCchHHHHHHHH------HH-----hcCCHHHHHHHHHHHH
Confidence 9994333 45688899877765 11 3555677777765543
No 300
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=37.36 E-value=19 Score=32.34 Aligned_cols=32 Identities=9% Similarity=0.185 Sum_probs=25.4
Q ss_pred HhcccCccceeccCchhhHHHhhhc----CCeeecccc
Q 012645 335 VLAHQAVGCFITHCGWNSILEGLSL----GVAVVAVPQ 368 (459)
Q Consensus 335 lL~~~~~~~~I~HGG~gs~~eal~~----GvP~li~P~ 368 (459)
+-..+++ +|.-||=||+++++.. ++|++.++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3334566 9999999999999853 789998873
No 301
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=37.21 E-value=50 Score=29.13 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++. -+- .++|+.|+++|++|+++.-.
T Consensus 33 k~~lVTGas~-GIG--~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 33 KRALITGAST-GIG--KKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp CEEEEESTTS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCC-HHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5677776553 333 47899999999999988754
No 302
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=36.97 E-value=32 Score=29.63 Aligned_cols=26 Identities=19% Similarity=0.296 Sum_probs=20.1
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 18 QGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 18 ~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
.|-+- .++|++|+++|++|+++..+.
T Consensus 33 Sg~iG--~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 33 SGKMG--FAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp CSHHH--HHHHHHHHHTTCEEEEEECSC
T ss_pred ccHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 45444 468899999999999987654
No 303
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=36.95 E-value=26 Score=31.27 Aligned_cols=33 Identities=21% Similarity=0.196 Sum_probs=23.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+|+++ |+.|.+-. .++++|.++||+|+.++-.
T Consensus 5 ~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILLI--GATGYIGR--HVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCEEEE--STTSTTHH--HHHHHHHHTTCCEEEECCC
T ss_pred CEEEEE--cCCcHHHH--HHHHHHHhCCCCEEEEECC
Confidence 555554 44555554 5688999999999987754
No 304
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=36.90 E-value=33 Score=30.63 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|||.|+..|..|. .+|+.|.+.||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 7999998777774 468889899999977654
No 305
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=36.89 E-value=24 Score=32.38 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|||.|+..|..| ..+|..|.+.||+|++....
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3799999888888 47889999999999988653
No 306
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=36.85 E-value=59 Score=29.34 Aligned_cols=33 Identities=24% Similarity=0.183 Sum_probs=25.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|.++.| +- ..+|+.|+++|++|+++...
T Consensus 47 k~~lVTGas~G-IG--~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 47 KVAFITGAARG-QG--RTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp CEEEESSCSSH-HH--HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCeEEEEecc
Confidence 68888876543 33 47899999999999988543
No 307
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=36.77 E-value=12 Score=33.90 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=29.3
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|...++..+|+++-.|-.| +..|..|+++|++|+++-...
T Consensus 1 M~~~~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp CEEEEEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 3333334688888877655 678888999999999987653
No 308
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=36.75 E-value=21 Score=32.15 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
+|||.|+-.|..|. .+|+.|+++||+|++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 47999998888774 689999999999988754
No 309
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=36.72 E-value=24 Score=31.81 Aligned_cols=35 Identities=11% Similarity=0.221 Sum_probs=24.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+.|||+++ |+.|.+-. .|++.|.++||+|+.+..
T Consensus 1 M~~~~ilVt--GatG~iG~--~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 1 MAKQRVFIA--GHRGMVGS--AIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp -CCEEEEEE--TTTSHHHH--HHHHHHTTCTTEEEECCC
T ss_pred CCCCEEEEE--CCCcHHHH--HHHHHHHhCCCeEEEEec
Confidence 345777655 55666654 468899999999887653
No 310
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=36.65 E-value=2.6e+02 Score=26.41 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLAS-KRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~-~Gh~V~~~~~~ 44 (459)
+|||+++..|+ ....+++.|++ .|++++++.+.
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~~ 57 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAPG 57 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEEC
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEECC
Confidence 47999998773 35677888865 58887777654
No 311
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=36.62 E-value=30 Score=30.28 Aligned_cols=35 Identities=9% Similarity=0.042 Sum_probs=28.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 10 il~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.|..-|+-|-..=.+.||..|+++|++|.++=.+
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 44444578899999999999999999999887544
No 312
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=36.58 E-value=23 Score=33.36 Aligned_cols=40 Identities=10% Similarity=0.080 Sum_probs=29.4
Q ss_pred CCCcEEEEEcCCCccCHHH----HHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINP----LLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p----~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+||||+++..|.-+--.- -..++++|.+.||+|+.+...
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 8899998888774443333 347888898899999988754
No 313
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=36.57 E-value=48 Score=28.82 Aligned_cols=40 Identities=23% Similarity=0.258 Sum_probs=26.5
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.+.++. |+++++.++ |-+- ..+|++|.++|++|+++.-.
T Consensus 1 m~~~l~~-k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 1 MDMGISG-KVAVITGSS-SGIG--LAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CCCCCTT-CEEEEESCS-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCC-CEEEEECCC-chHH--HHHHHHHHHCCCEEEEEcCC
Confidence 5554444 456666544 3343 46899999999999887643
No 314
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=36.55 E-value=21 Score=27.47 Aligned_cols=32 Identities=13% Similarity=0.043 Sum_probs=23.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.+|+++..|..| ..+++.|.+.|++|+++...
T Consensus 7 ~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 468777654444 35789999999999988754
No 315
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=36.46 E-value=17 Score=35.72 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=28.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++.+.+.+|+++-.|..| +.+|..|+++|++|+++-..
T Consensus 1 M~~~~~~~dVvIVGgG~aG-----l~aA~~La~~G~~V~liE~~ 39 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGG-----STLASFVAMRGHRVLLLERE 39 (512)
T ss_dssp ----CEEEEEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred CCCCCccCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEccC
Confidence 5544455789999888766 67788899999999998554
No 316
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=36.46 E-value=1.3e+02 Score=26.58 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|++++|.++.| +- ..+|+.|+++|++|+++.-.
T Consensus 41 ~k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 41 ARSVLVTGGTKG-IG--RGIATVFARAGANVAVAARS 74 (293)
T ss_dssp TCEEEETTTTSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEECC
Confidence 368888876543 33 36789999999999988754
No 317
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=36.45 E-value=59 Score=25.12 Aligned_cols=39 Identities=10% Similarity=0.067 Sum_probs=26.8
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+..+++++|+++- .+-.-...+.+.|.+.|++|..+.+
T Consensus 1 Ms~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 2rjn_A 1 MSLNYKNYTVMLVD----DEQPILNSLKRLIKRLGCNIITFTS 39 (154)
T ss_dssp ---CCSCCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESC
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHcCCeEEEeCC
Confidence 67667889999886 3455566778888888998875543
No 318
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=36.38 E-value=57 Score=24.64 Aligned_cols=39 Identities=10% Similarity=0.132 Sum_probs=25.1
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+..+++++|+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (142)
T 3cg4_A 1 MSLAEHKGDVMIVD----DDAHVRIAVKTILSDAGFHIISADS 39 (142)
T ss_dssp -----CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeCC
Confidence 56556778999885 4555667788888888998765443
No 319
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=36.26 E-value=75 Score=25.97 Aligned_cols=40 Identities=8% Similarity=-0.060 Sum_probs=31.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|+.+||+++.+++.. ..-+....+.|.+.|++|.+++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 566899999886654 3456667788889999999999764
No 320
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=36.22 E-value=34 Score=28.28 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQ-FAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~-la~~L~~~Gh~V~~~~~~ 44 (459)
.|||+++.+. .|+..-+.. +++.|.+.|++|.++--.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 3789888877 887766554 466677689999887544
No 321
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=36.17 E-value=28 Score=25.63 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=51.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEecCccc-cccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKR-VKATLATTHYTV-KSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~G-h~V~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
.|+|+++.. |-+- ..+++.|.++| |+|+.+...... +.+...++.+..... . +
T Consensus 5 ~~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~--~--------~---------- 59 (118)
T 3ic5_A 5 RWNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDA--K--------D---------- 59 (118)
T ss_dssp CEEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCT--T--------C----------
T ss_pred cCeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecC--C--------C----------
Confidence 357777744 4443 35788999999 999887754322 223344665554320 0 1
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchh---HHHHHHHcCCceEEEccch
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTW---ALDVARQFGIYGAAMMTNS 134 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~---~~~~a~~lgiP~v~~~~~~ 134 (459)
...+.+.++ ++|+||.-.-... ....+.+.|++++.++...
T Consensus 60 --~~~~~~~~~-------~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (118)
T 3ic5_A 60 --EAGLAKALG-------GFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTEDV 103 (118)
T ss_dssp --HHHHHHHTT-------TCSEEEECSCGGGHHHHHHHHHHTTCEEECCCSCH
T ss_pred --HHHHHHHHc-------CCCEEEECCCchhhHHHHHHHHHhCCCEEEecCcH
Confidence 011222221 6799886543322 3445567788877765433
No 322
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=35.87 E-value=96 Score=28.39 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=68.0
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCCCchh---hhhhcCCCceEEeeecHHHHhcccCccce
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKAS--EKPFLWVVKENENKLPVE---FVNSVGETGLVVRWCNQFEVLAHQAVGCF 344 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~--~~~~v~~~~~~~~~~~~~---~~~~~~~~v~v~~~~p~~~lL~~~~~~~~ 344 (459)
.+.+|+.|.+.. ..+.++.+. +.+++.+... .++. +.+... +..+-...++|..++++++
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~----~~~~~~~~~~~~~----~~~~~~~~~ll~~~~~D~V 79 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDI----DPAALKAAVERTG----ARGHASLTDMLAQTDADIV 79 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECS----SHHHHHHHHHHHC----CEEESCHHHHHHHCCCSEE
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcC----CHHHHHHHHHHcC----CceeCCHHHHhcCCCCCEE
Confidence 488899998863 345666655 4555544432 2221 111111 2345567888986666556
Q ss_pred eccCc----hhhHHHhhhcCCeeecc-cccc--chh-hHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcC
Q 012645 345 ITHCG----WNSILEGLSLGVAVVAV-PQFS--DQP-TNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDG 412 (459)
Q Consensus 345 I~HGG----~gs~~eal~~GvP~li~-P~~~--DQ~-~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 412 (459)
+---- ...+.+|+.+|+++++= |+.. ++- .-....++. |+-..+.... ..++ ....+++++.+
T Consensus 80 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~-g~~~~v~~~~--r~~p--~~~~~k~~i~~ 150 (354)
T 3q2i_A 80 ILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKA-KKHLFVVKQN--RRNA--TLQLLKRAMQE 150 (354)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TCCEEECCGG--GGSH--HHHHHHHHHHT
T ss_pred EECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHh-CCeEEEEEcc--cCCH--HHHHHHHHHhc
Confidence 63222 34577899999999873 7543 332 334455666 7666555442 4444 23444555543
No 323
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=35.86 E-value=38 Score=25.64 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=28.6
Q ss_pred cEEEEEcCCCccCH--HHHHHHHHHHHhCC--CeEEEEecCcccc
Q 012645 8 VHVLVLTYPAQGHI--NPLLQFAKRLASKR--VKATLATTHYTVK 48 (459)
Q Consensus 8 ~kil~~~~~~~GH~--~p~~~la~~L~~~G--h~V~~~~~~~~~~ 48 (459)
||++|+-.-..-.. +-.+..|...+++| |+|.++.......
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 78877766533222 33677899999999 8999998765443
No 324
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=35.85 E-value=47 Score=28.90 Aligned_cols=40 Identities=10% Similarity=0.144 Sum_probs=25.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|...++. |.++++.++ |-+- ..+|++|+++||+|++..-.
T Consensus 1 M~~~l~~-k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 1 MSGRLTG-KVALVSGGA-RGMG--ASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp -CCTTTT-CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCC-CEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5444444 455666443 3333 36789999999999987654
No 325
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=35.81 E-value=2e+02 Score=25.31 Aligned_cols=151 Identities=11% Similarity=0.016 Sum_probs=77.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhh-----------------------cCCCc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNS-----------------------VGETG 324 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~-----------------------~~~~v 324 (459)
++.++.|+.|.++ ...+..|...|.++.|+.......+...+... ..+++
T Consensus 13 ~k~VLVVGgG~va-------~rka~~Ll~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~i 85 (274)
T 1kyq_A 13 DKRILLIGGGEVG-------LTRLYKLMPTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNEI 85 (274)
T ss_dssp TCEEEEEEESHHH-------HHHHHHHGGGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTSCCC
T ss_pred CCEEEEECCcHHH-------HHHHHHHHhCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhcccccccccccCCe
Confidence 4568888888765 44566777888887777543211110111111 11333
Q ss_pred -eEEeeecHHHHhc------ccCccceeccCchhhHHHhh-----hc---CCeeeccccccchhhHHH-----HHHHhhh
Q 012645 325 -LVVRWCNQFEVLA------HQAVGCFITHCGWNSILEGL-----SL---GVAVVAVPQFSDQPTNAK-----FVEEVWE 384 (459)
Q Consensus 325 -~v~~~~p~~~lL~------~~~~~~~I~HGG~gs~~eal-----~~---GvP~li~P~~~DQ~~na~-----rv~~~~G 384 (459)
.+..---....|. .+++ +|.--|.....+.+ .. |+|+-++ |.+..+. .+.+- +
T Consensus 86 ~~~i~~~~~~~dL~~l~~~~~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~g-~ 158 (274)
T 1kyq_A 86 YEYIRSDFKDEYLDLENENDAWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEIG-D 158 (274)
T ss_dssp SEEECSSCCGGGGCCSSTTCCEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEET-T
T ss_pred eEEEcCCCCHHHHhhcccCCCeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEeC-C
Confidence 3331111223443 4455 77777766444433 33 6666222 2222221 22223 3
Q ss_pred -ceEEeeecCCCcccHHHHHHHHHHHh---cChhhHHHHHHHHHHHHHHHHH
Q 012645 385 -VGVRAKKNRAGIVTGEELNKCVNEVM---DGERSQKIKRNVSKWREFAKKA 432 (459)
Q Consensus 385 -~G~~~~~~~~~~~~~~~l~~~i~~ll---~~~~~~~~~~~a~~l~~~~~~~ 432 (459)
+-+.+........-+..|++.|.+++ .+++...+.+.+.++++.+++.
T Consensus 159 ~l~IaIST~Gksp~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~ 210 (274)
T 1kyq_A 159 RLQILISTNGLSPRFGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLL 210 (274)
T ss_dssp TEEEEEEESSSCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCcHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhh
Confidence 33334443111344578888888888 5343347788888888888765
No 326
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=35.77 E-value=34 Score=30.93 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
++.|+||+. |+.|.+-. .|++.|.++||+|+.+.-.
T Consensus 9 ~~~~~vlVT--GatG~iG~--~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVT--GANGFVAS--HVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEE--CCccHHHH--HHHHHHHHCCCEEEEEeCC
Confidence 445666554 45565554 5788999999999988754
No 327
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=35.67 E-value=79 Score=30.07 Aligned_cols=25 Identities=8% Similarity=0.166 Sum_probs=19.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRV 36 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh 36 (459)
+||||++..|++ -.+||+.|++.+.
T Consensus 3 ~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 589999988854 4578999988774
No 328
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=35.55 E-value=59 Score=27.83 Aligned_cols=32 Identities=13% Similarity=0.072 Sum_probs=24.3
Q ss_pred CCccEEEeCCCchh-------HHHHHHHcCCceEEEccc
Q 012645 102 SPVNCIVYDSLLTW-------ALDVARQFGIYGAAMMTN 133 (459)
Q Consensus 102 ~~~Dlvi~D~~~~~-------~~~~a~~lgiP~v~~~~~ 133 (459)
.+||+|++|..-.. |..+.-.+|+|+|.+.=.
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 47999999975533 556677889999998653
No 329
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=35.52 E-value=29 Score=31.40 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
+.|||.|+-.|..| ..+|+.|+++||+|++...
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 34799999877766 5689999999999998754
No 330
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=35.47 E-value=37 Score=27.37 Aligned_cols=37 Identities=16% Similarity=0.167 Sum_probs=28.3
Q ss_pred cEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPA---QGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~---~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-+|+++|.=+ .--..+...|++.|.++|.+|.|+.+|
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4677776411 113467899999999999999999998
No 331
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=35.40 E-value=33 Score=30.45 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=29.5
Q ss_pred cEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVL-VLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil-~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
||++ |..-|+-|-..=.+.||..|+++|++|.++=.+
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 5554 444578899999999999999999999887544
No 332
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=35.38 E-value=25 Score=33.87 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=26.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|||.++..|..| ..+|..|+++||+|+++-..
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 899999777666 46899999999999988654
No 333
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=35.37 E-value=41 Score=28.65 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
||+++++.++.| +- ..+|++|.++|++|.+..-.
T Consensus 2 ~k~vlITGas~g-IG--~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG-IG--EAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 678888866543 33 47899999999999887654
No 334
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=35.27 E-value=9.4 Score=19.60 Aligned_cols=17 Identities=24% Similarity=0.497 Sum_probs=14.5
Q ss_pred chhhHHHhhhcCCeeec
Q 012645 349 GWNSILEGLSLGVAVVA 365 (459)
Q Consensus 349 G~gs~~eal~~GvP~li 365 (459)
|.|+++..|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67889999999998765
No 335
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=35.17 E-value=39 Score=29.96 Aligned_cols=44 Identities=9% Similarity=0.036 Sum_probs=24.3
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.....++|||++.-.-.=-..-+-.+...++++|++|++++-.
T Consensus 1 ~~~~~~~~rvLvv~aHPDDe~lg~GGtia~~~~~G~~V~vv~~T 44 (273)
T 3dff_A 1 MPHDPGATRLLAISPHLDDAVLSFGAGLAQAAQDGANVLVYTVF 44 (273)
T ss_dssp -------CEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCCCCCCCCEEEEEeCCChHHHhHHHHHHHHHHCCCcEEEEEEe
Confidence 55555667887776543333444555555666789999988743
No 336
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=35.16 E-value=38 Score=29.74 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=26.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|.++|+++++.++.| +- ..+|++|+++|++|++...
T Consensus 23 m~~~k~vlITGas~g-IG--~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG-IG--AAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH-HH--HHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch-HH--HHHHHHHHHCCCEEEEEcC
Confidence 556788888876543 33 4788999999999987744
No 337
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=35.16 E-value=55 Score=28.37 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++.| +- .++|++|+++|++|++..-.
T Consensus 13 k~vlVTGas~g-IG--~~ia~~l~~~G~~V~~~~r~ 45 (256)
T 3gaf_A 13 AVAIVTGAAAG-IG--RAIAGTFAKAGASVVVTDLK 45 (256)
T ss_dssp CEEEECSCSSH-HH--HHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 67788866543 33 46889999999999887654
No 338
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=35.13 E-value=31 Score=31.89 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=32.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCccc--cccCCCCceEEEc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTV--KSIHATTVGVEPI 60 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~--~~~~~~g~~~~~~ 60 (459)
|..|||+++ |+.|.+-. .|+++|.++ ||+|+.++-.... ......+++++..
T Consensus 22 m~~~~vlVt--GatG~iG~--~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~ 76 (372)
T 3slg_A 22 MKAKKVLIL--GVNGFIGH--HLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEG 76 (372)
T ss_dssp -CCCEEEEE--SCSSHHHH--HHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEEC
T ss_pred cCCCEEEEE--CCCChHHH--HHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeC
Confidence 445666654 55666664 578889888 9999999864321 2222357777654
No 339
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=35.04 E-value=34 Score=31.09 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
+|+||+ + |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 5 ~~~vlV-T-GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILV-T-GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEE-E-TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEEEE-e-cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 355554 4 3445554 3678999999999998864
No 340
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=35.02 E-value=42 Score=29.92 Aligned_cols=38 Identities=11% Similarity=0.205 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCccCHHHH--HHHHHHHHhCC-CeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPL--LQFAKRLASKR-VKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~--~~la~~L~~~G-h~V~~~~~~ 44 (459)
++.|||+++ +..+|-.+. -.|++.|.+.| ++|++...+
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 678999995 445886553 57788888888 999999864
No 341
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=35.01 E-value=1.1e+02 Score=23.57 Aligned_cols=49 Identities=10% Similarity=-0.013 Sum_probs=34.9
Q ss_pred cCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHHhcCh
Q 012645 359 LGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEVMDGE 413 (459)
Q Consensus 359 ~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 413 (459)
..+|+|++--..+ ........+. |+--.+.+ .++.+.|...|+.++...
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~k----P~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAK----PFAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEES----SCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeC----CCCHHHHHHHHHHHHHHH
Confidence 4788887754433 4455566667 77666665 589999999999998654
No 342
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=34.94 E-value=68 Score=25.81 Aligned_cols=43 Identities=12% Similarity=0.074 Sum_probs=36.1
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCC
Q 012645 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHA 52 (459)
Q Consensus 10 il~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~ 52 (459)
.++++.|+.--+.+.+-||..-++.|++|+++.+-.....+.+
T Consensus 8 ~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 8 NLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 5666668888899999999999999999999998776666655
No 343
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=34.77 E-value=14 Score=34.49 Aligned_cols=32 Identities=22% Similarity=0.176 Sum_probs=24.1
Q ss_pred HHhcccCccceeccCchhhHHHhhhc----CCeeeccc
Q 012645 334 EVLAHQAVGCFITHCGWNSILEGLSL----GVAVVAVP 367 (459)
Q Consensus 334 ~lL~~~~~~~~I~HGG~gs~~eal~~----GvP~li~P 367 (459)
++-..+++ +|+=||=||++.|... ++|+|.+=
T Consensus 104 ~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGiN 139 (365)
T 3pfn_A 104 DISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAFH 139 (365)
T ss_dssp CCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEEE
T ss_pred hcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEEc
Confidence 34445666 9999999999999763 57887663
No 344
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=34.74 E-value=33 Score=31.36 Aligned_cols=35 Identities=11% Similarity=0.076 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+.|+||++ |+.|.+-. .|++.|.++||+|+.++-.
T Consensus 24 ~~~~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLIT--GVAGFIGS--NLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEE--CCCcHHHH--HHHHHHHHCCCEEEEEeCC
Confidence 34666654 55566653 6788999999999998764
No 345
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=34.73 E-value=39 Score=27.37 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=28.4
Q ss_pred cEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYP---AQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~---~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-+|+++|.= -.--..+...|++.|.++|.+|.|+.+|
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 467777641 1123468899999999999999999998
No 346
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=34.73 E-value=26 Score=33.53 Aligned_cols=34 Identities=9% Similarity=-0.043 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
++.|||.++..|..|. .+|..|++ ||+|+.+-..
T Consensus 34 ~~~mkIaVIGlG~mG~-----~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 34 SEFMKITISGTGYVGL-----SNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp -CCCEEEEECCSHHHH-----HHHHHHHT-TSEEEEECSC
T ss_pred cCCCEEEEECcCHHHH-----HHHHHHHc-CCeEEEEecC
Confidence 4568999998776663 56778887 9999987654
No 347
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=34.54 E-value=40 Score=30.51 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+|||++. |+.|.+-. .|++.|.++||+|+.++-.
T Consensus 13 ~M~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVL--GATGLLGH--HAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEE--STTSHHHH--HHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEE--CCCcHHHH--HHHHHHHHCCCEEEEEecC
Confidence 4676655 45565553 5688899999999998754
No 348
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=34.41 E-value=27 Score=32.51 Aligned_cols=34 Identities=18% Similarity=0.017 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|++++|+++-.|-.| +.+|..|+++|++|+++-.
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 556789999887666 6788999999999999854
No 349
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=34.37 E-value=65 Score=29.10 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=24.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|++++|.++. -+- ..+|++|+++|++|+++.-
T Consensus 28 k~vlVTGas~-GIG--~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 28 RVVIVTGAGG-GIG--RAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp CEEEETTTTS-HHH--HHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCc-HHH--HHHHHHHHHCCCEEEEEeC
Confidence 7888887653 333 4688999999999998754
No 350
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=34.36 E-value=22 Score=32.20 Aligned_cols=46 Identities=13% Similarity=0.096 Sum_probs=34.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc-ccccCCCCceEE
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT-VKSIHATTVGVE 58 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~-~~~~~~~g~~~~ 58 (459)
+|||+++..|+.|- .+|..|. .||+|+++..... .+.+.+.|+...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~ 48 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLY 48 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEE
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhCCceEe
Confidence 38999998888885 5688888 9999999987643 344554566554
No 351
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=34.32 E-value=39 Score=29.49 Aligned_cols=38 Identities=16% Similarity=0.240 Sum_probs=31.2
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+++|++.+.. |+-|=..=.+.||..|+ +|++|.++-.+
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 4678877765 58888888999999999 99999998655
No 352
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=34.32 E-value=52 Score=28.68 Aligned_cols=39 Identities=13% Similarity=0.064 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQ--GHINPLLQ-FAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~--GH~~p~~~-la~~L~~~Gh~V~~~~~ 43 (459)
+.+|||+++....+ |.-.-++. +++.+.+.|++|.++--
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 45689988886544 44444444 56667778999887653
No 353
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=34.21 E-value=30 Score=28.98 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=22.9
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLT-YPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~-~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|||+++- .|..| ..+|+.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 6788875 44444 3578899999999988754
No 354
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=34.03 E-value=51 Score=27.55 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=30.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
..++++.+|..|+-.-+..+++.|+++|+.|...-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 457777788888888899999999999999887755
No 355
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=33.99 E-value=41 Score=29.69 Aligned_cols=39 Identities=21% Similarity=0.251 Sum_probs=32.5
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+++|+++++. |+-|-..=...||..|++.|.+|.++-.+
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4577777765 68888888999999999999999998665
No 356
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=33.97 E-value=71 Score=23.87 Aligned_cols=65 Identities=9% Similarity=0.069 Sum_probs=45.4
Q ss_pred hcccCccceeccCchhh---------HHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHH
Q 012645 336 LAHQAVGCFITHCGWNS---------ILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCV 406 (459)
Q Consensus 336 L~~~~~~~~I~HGG~gs---------~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i 406 (459)
++.++| +|--.|..| +..|...|+|+|.+=.+..+. --..+++. |..+- ..+.+.|.++|
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~---a~~iV-----~Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV---SSEVV-----GWNPHCIRDAL 104 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH---CSEEE-----CSCHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh---Cceec-----cCCHHHHHHHH
Confidence 344666 898888888 677889999999886655441 12225555 33333 68899999999
Q ss_pred HHHhc
Q 012645 407 NEVMD 411 (459)
Q Consensus 407 ~~ll~ 411 (459)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 88764
No 357
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=33.94 E-value=46 Score=28.32 Aligned_cols=40 Identities=13% Similarity=0.300 Sum_probs=28.2
Q ss_pred CCCc-EEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERV-HVLVLTYPAQGH----INPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~-kil~~~~~~~GH----~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+++| +|.+++....+- ..-...|++.|+++|+.|+.-+..
T Consensus 10 ~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 10 KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp CCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred cCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 4566 588886655543 234678899999999999876654
No 358
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=33.88 E-value=1.8e+02 Score=23.31 Aligned_cols=142 Identities=15% Similarity=0.183 Sum_probs=75.8
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCc
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCG 349 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG 349 (459)
+.|-|-+||.. +-...++....++..|..+-+.+.+- -..|+...+ ++ .=...-.++++|.=.|
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-HR~p~~~~~----------~~---~~a~~~g~~ViIa~AG 67 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA-HRTPKMMVQ----------FA---SEARERGINIIIAGAG 67 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-TTSHHHHHH----------HH---HHTTTTTCCEEEEEEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC-cCCHHHHHH----------HH---HHHHhCCCcEEEEECC
Confidence 45777777765 55678888888898887765554432 223332210 00 0001112333776655
Q ss_pred hh----hHHHhhhcCCeeeccccccc---hhhHHHHHHHhhhceE--E-eeecCCCcccHHHHHHHHHHHhcChhhHHHH
Q 012645 350 WN----SILEGLSLGVAVVAVPQFSD---QPTNAKFVEEVWEVGV--R-AKKNRAGIVTGEELNKCVNEVMDGERSQKIK 419 (459)
Q Consensus 350 ~g----s~~eal~~GvP~li~P~~~D---Q~~na~rv~~~~G~G~--~-~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 419 (459)
.. ++..++ .-.|+|.+|.... -.+--.-+.++ --|+ . +...+.+..++..+...|-. +.|+ .++
T Consensus 68 ~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqm-p~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~---~l~ 141 (163)
T 3ors_A 68 GAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQM-PGGIPVATTAIGAAGAKNAGILAARMLS-IQNP---SLV 141 (163)
T ss_dssp SSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTC-CTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCT---HHH
T ss_pred chhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhC-CCCCceEEEEcCCcccHHHHHHHHHHHh-CCCH---HHH
Confidence 43 444444 5689999997532 22222233333 3332 1 11110014555555555543 4566 899
Q ss_pred HHHHHHHHHHHHHH
Q 012645 420 RNVSKWREFAKKAV 433 (459)
Q Consensus 420 ~~a~~l~~~~~~~~ 433 (459)
++.+.++++.++.+
T Consensus 142 ~kl~~~r~~~~~~v 155 (163)
T 3ors_A 142 EKLNQYESSLIQKV 155 (163)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887643
No 359
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=33.85 E-value=85 Score=29.96 Aligned_cols=40 Identities=13% Similarity=0.122 Sum_probs=32.8
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEecCccc
Q 012645 8 VHVLVLT-YPAQGHINPLLQFAKRLASKRVKATLATTHYTV 47 (459)
Q Consensus 8 ~kil~~~-~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~ 47 (459)
.+++++. .++-|-..=+..||..|+.+|++|.++..+.+.
T Consensus 97 ~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r 137 (433)
T 3kl4_A 97 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYR 137 (433)
T ss_dssp SEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 4555554 469999999999999999999999999887554
No 360
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=33.84 E-value=14 Score=32.40 Aligned_cols=35 Identities=11% Similarity=0.097 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKR----VKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~G----h~V~~~~~~ 44 (459)
|++|||.|+-.|..|.. +|+.|.++| |+|++....
T Consensus 2 m~~m~i~iiG~G~mG~~-----~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSA-----LAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp CSSSCEEEECCSHHHHH-----HHHHHHHHTSSCGGGEEEECSS
T ss_pred CCCCEEEEECcCHHHHH-----HHHHHHHCCCCCCCeEEEEeCC
Confidence 45689999988777754 678888889 899887543
No 361
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=33.78 E-value=46 Score=27.41 Aligned_cols=34 Identities=24% Similarity=0.437 Sum_probs=23.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|||+++. |+.|-+- ..+++.|. +||+|+.+.-.
T Consensus 2 ~kM~vlVt--Gasg~iG--~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLI--GASGTLG--SAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEE--TTTSHHH--HHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEE--cCCcHHH--HHHHHHHH-CCCeEEEEecC
Confidence 46785444 3445554 45788999 99999987654
No 362
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=33.75 E-value=23 Score=29.75 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=18.8
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHH---hCCCeEE
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLA---SKRVKAT 39 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~---~~Gh~V~ 39 (459)
|+. |.+|||+++....+.. .-...|++.++ ..|++|.
T Consensus 1 m~~-M~~mkIl~I~GS~r~~-s~t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 1 MTT-TSPLHFVTLLGSLRKA-SFNAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp -----CCEEEEEEECCCSTT-CHHHHHHHHHHHHCCTTEEEE
T ss_pred CCC-CCCCEEEEEEcCCCCC-ChHHHHHHHHHHHccCCCEEE
Confidence 443 7789998888654321 22334444443 3466665
No 363
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=33.62 E-value=47 Score=29.35 Aligned_cols=44 Identities=14% Similarity=0.112 Sum_probs=26.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|......+|||++.-.-.=-..-+-.+...++++|++|++++-.
T Consensus 1 ~~~~~~~~rvLvv~aHPDDe~l~~GGtia~~~~~G~~V~vv~~T 44 (270)
T 3dfi_A 1 MLQDADRTRILAISPHLDDAVLSVGASLAQAEQDGGKVTVFTVF 44 (270)
T ss_dssp -----CCSEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCCCCEEEEEeCCchHHHhhHHHHHHHHhCCCeEEEEEEe
Confidence 55556678887776544444455555555666899999988743
No 364
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=33.60 E-value=2.4e+02 Score=24.54 Aligned_cols=85 Identities=12% Similarity=0.055 Sum_probs=47.2
Q ss_pred CcEEEEEcCCCccCHH-HH-HHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 7 RVHVLVLTYPAQGHIN-PL-LQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~-p~-~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
+.+|.++......... .+ -.+-+++.++|+++.+...... +....
T Consensus 4 ~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~---------------------------~~~~~------ 50 (305)
T 3g1w_A 4 NETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGAAQY---------------------------DIQEQ------ 50 (305)
T ss_dssp -CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEECSSS---------------------------CHHHH------
T ss_pred CceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCCCcC---------------------------CHHHH------
Confidence 3567666655433333 33 3456667778999987543210 11111
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCch----hHHHHHHHcCCceEEEcc
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLT----WALDVARQFGIYGAAMMT 132 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~----~~~~~a~~lgiP~v~~~~ 132 (459)
.+.++.++.. ++|.||...... .....+...|+|+|.+..
T Consensus 51 --~~~i~~l~~~------~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 51 --ITVLEQAIAK------NPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp --HHHHHHHHHH------CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred --HHHHHHHHHh------CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 1233344443 789998765432 234455678999999864
No 365
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=33.57 E-value=13 Score=38.34 Aligned_cols=111 Identities=10% Similarity=-0.036 Sum_probs=74.5
Q ss_pred eeecHHHHhcccCccceeccCchhhHHHhhhcCCeeeccccccchhhHHHHHHHhhhceEEeeecC--C--CcccHHHHH
Q 012645 328 RWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVAVVAVPQFSDQPTNAKFVEEVWEVGVRAKKNR--A--GIVTGEELN 403 (459)
Q Consensus 328 ~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~DQ~~na~rv~~~~G~G~~~~~~~--~--~~~~~~~l~ 403 (459)
++.+-.++|..+|+ +||= =.+.+.|.+..++|+|.+....|++.+- .. | ...+... + --.+.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g--~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKG----LR-G--FYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSS----CC-S--BSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhc----cC-C--cccChhHhCCCCeECCHHHHH
Confidence 34456689977777 9998 4678899999999999998777776431 12 3 2333211 0 136778888
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 012645 404 KCVNEVMDGERSQKIKRNVSKWREFAKKAVSAGGSSDKNIDEFVVRLL 451 (459)
Q Consensus 404 ~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~~g~s~~~~~~~~~~l~ 451 (459)
++|.+...+. +.++++.+++.+++-.. .+|.++...++.+++...
T Consensus 675 ~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 8888777532 27888888888887642 455666666666666554
No 366
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=33.54 E-value=32 Score=31.31 Aligned_cols=36 Identities=11% Similarity=0.057 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
++|+||+. |+.|.+-. .|+++|.++||+|+.+.-..
T Consensus 18 ~~~~vlVt--GatG~iG~--~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 18 GSHMILVT--GSAGRVGR--AVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp ---CEEEE--TTTSHHHH--HHHHHHHHTTCCEEEEESSC
T ss_pred CCCEEEEE--CCCChHHH--HHHHHHHhCCCEEEEEeCCC
Confidence 34565554 55566665 56789999999999987543
No 367
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=33.47 E-value=54 Score=29.37 Aligned_cols=33 Identities=12% Similarity=0.190 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
|++|||+++... .......+.|.+.||+|.+..
T Consensus 5 ~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 677999888542 356677899999999998774
No 368
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=33.47 E-value=42 Score=30.17 Aligned_cols=34 Identities=9% Similarity=0.072 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
|+|+++ |+.|.+-. .++++|.++||+|+.++-..
T Consensus 5 ~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 5 EKIIIY--GGTGYIGK--FMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCEEEE--TTTSTTHH--HHHHHHHHTTCCEEEEECCC
T ss_pred cEEEEE--cCCchhHH--HHHHHHHhCCCcEEEEECCc
Confidence 455554 55566654 57889999999999987653
No 369
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=33.26 E-value=17 Score=31.93 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=24.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCe-EEEEe
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVK-ATLAT 42 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~-V~~~~ 42 (459)
|....++|||.|+..|..|. .+|+.|.+.||+ |++..
T Consensus 4 m~~~~~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~v~~~~ 41 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLAT-----NLAKALYRKGFRIVQVYS 41 (266)
T ss_dssp ---CGGGCCEEEECCSHHHH-----HHHHHHHHHTCCEEEEEC
T ss_pred hhcCCCCCeEEEEcCCHHHH-----HHHHHHHHCCCeEEEEEe
Confidence 33333468999997766663 468888888999 55553
No 370
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=33.23 E-value=23 Score=32.51 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRV-KATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh-~V~~~~~~ 44 (459)
++|||.++..|..|.. +|..|++.|| +|+++-..
T Consensus 8 ~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECC
Confidence 3579998876555543 8899999999 97777554
No 371
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=33.19 E-value=59 Score=27.71 Aligned_cols=40 Identities=13% Similarity=0.019 Sum_probs=25.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++.++.+ .++++.+ .|-+- ..+++.|.++|++|+++.-.
T Consensus 1 M~~~l~~k-~vlITGa-sggiG--~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 1 MELFLAGR-RVLVTGA-GKGIG--RGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp CCCCCTTC-EEEEEST-TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CccccCCc-EEEEECC-CcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 55444444 4555543 33333 46788999999999887653
No 372
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=33.05 E-value=33 Score=30.50 Aligned_cols=32 Identities=25% Similarity=0.077 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.+||.++-.|..| ..+|..|+++||+|++...
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 3689999777766 3588999999999988644
No 373
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=32.68 E-value=62 Score=28.30 Aligned_cols=33 Identities=21% Similarity=0.247 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++.| +- .++|++|+++|++|.+....
T Consensus 19 k~~lVTGas~g-IG--~aia~~l~~~G~~V~~~~~~ 51 (270)
T 3is3_A 19 KVALVTGSGRG-IG--AAVAVHLGRLGAKVVVNYAN 51 (270)
T ss_dssp CEEEESCTTSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCch-HH--HHHHHHHHHCCCEEEEEcCC
Confidence 67888866543 33 47899999999999987643
No 374
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=32.68 E-value=28 Score=29.49 Aligned_cols=36 Identities=19% Similarity=0.054 Sum_probs=27.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
..+++-+|..|+..-+..++..|.++|++|...-.+
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 40 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELA 40 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCT
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCC
Confidence 455555666677777889999999999999877554
No 375
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=32.67 E-value=1.1e+02 Score=27.70 Aligned_cols=83 Identities=17% Similarity=0.171 Sum_probs=54.9
Q ss_pred HHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeC
Q 012645 31 LASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYD 110 (459)
Q Consensus 31 L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D 110 (459)
|.....+..+++++.+..+.+..|++.+.+.. ...+ ...+ ...+.++++.+++. +..+|+++
T Consensus 185 l~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~~-~~~~---~eps------------~~~l~~l~~~ik~~--~v~~If~e 246 (312)
T 2o1e_A 185 AKKAEKKEFITQHTAFGYLAKEYGLKQVPIAG-LSPD---QEPS------------AASLAKLKTYAKEH--NVKVIYFE 246 (312)
T ss_dssp HHSCSCCEEEESSCTTHHHHHHTTCEEEECSS-CCSS---SCCC------------HHHHHHHHHHTTSS--CCCEEECS
T ss_pred hhccCCCEEEEECCchHHHHHHCCCeEEEeec-cCCC---CCCC------------HHHHHHHHHHHHHc--CCCEEEEe
Confidence 33334456667778888888888998876632 1111 1111 24556777777666 78899999
Q ss_pred CCchh--HHHHHHHcCCceEEEc
Q 012645 111 SLLTW--ALDVARQFGIYGAAMM 131 (459)
Q Consensus 111 ~~~~~--~~~~a~~lgiP~v~~~ 131 (459)
..... +..+|+..|++.+.+.
T Consensus 247 ~~~~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 247 EIASSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp SCCCHHHHHHHHHHTCCEEECCC
T ss_pred CCCChHHHHHHHHHhCCcEEEec
Confidence 87753 6778999999987653
No 376
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=32.61 E-value=37 Score=29.47 Aligned_cols=33 Identities=12% Similarity=0.005 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
||+++++.++.| +- ..+|+.|+++|++|+++.-
T Consensus 1 Mk~vlVTGas~g-IG--~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF-GG--MGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST-TH--HHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch-HH--HHHHHHHHHCCCEEEEEeC
Confidence 577888866543 33 3689999999999887653
No 377
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=32.53 E-value=32 Score=31.35 Aligned_cols=35 Identities=14% Similarity=0.378 Sum_probs=23.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
++.|+|++. |+.|-+-. .|+++|.++||+|+.+.-
T Consensus 25 ~~~~~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILIT--GGAGFVGS--HLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEE--cCccHHHH--HHHHHHHHCCCEEEEEeC
Confidence 445666554 45565553 578899999999999875
No 378
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=32.50 E-value=1.3e+02 Score=24.73 Aligned_cols=48 Identities=13% Similarity=-0.049 Sum_probs=32.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCce
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVG 56 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~ 56 (459)
+||+|+.+++.- ..-+....+.|.+.|++|.+++...........|+.
T Consensus 4 ~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~~~~v~~~~g~~ 51 (197)
T 2rk3_A 4 KRALVILAKGAE-EMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVV 51 (197)
T ss_dssp CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEETTCSSCEECTTSCE
T ss_pred CEEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcCCCCccccCCCCE
Confidence 678888876553 344566778888999999999976433223334443
No 379
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=32.49 E-value=44 Score=29.03 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++ |-+- ..+|+.|+++|++|+++.-.
T Consensus 8 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 8 KLAVVTAGS-SGLG--FASALELARNGARLLLFSRN 40 (260)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-chHH--HHHHHHHHHCCCEEEEEeCC
Confidence 566677554 3333 47899999999999887643
No 380
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=32.40 E-value=45 Score=30.82 Aligned_cols=40 Identities=15% Similarity=0.099 Sum_probs=35.1
Q ss_pred CCcEEEEEcC-CCccCHHHHHHHHHHHH--hCCCeEEEEecCc
Q 012645 6 ERVHVLVLTY-PAQGHINPLLQFAKRLA--SKRVKATLATTHY 45 (459)
Q Consensus 6 ~~~kil~~~~-~~~GH~~p~~~la~~L~--~~Gh~V~~~~~~~ 45 (459)
+.+||+|++. |+-|-..-...||..|+ ++|++|.++..+.
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 3578888876 89999999999999999 9999999999874
No 381
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=32.29 E-value=46 Score=32.30 Aligned_cols=36 Identities=17% Similarity=-0.028 Sum_probs=29.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CC-eEEEEecCc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASK-RV-KATLATTHY 45 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~-Gh-~V~~~~~~~ 45 (459)
++.|||.++..|..| .++|..|+++ || +|+++-...
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 345899999988888 5789999999 99 999986543
No 382
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=32.26 E-value=47 Score=28.97 Aligned_cols=37 Identities=11% Similarity=0.046 Sum_probs=29.9
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+|++.++. |+-|=..=.+.||..|+++|++|.++=.+
T Consensus 18 ~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 18 KSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp SCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45555543 68888899999999999999999998654
No 383
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=32.23 E-value=37 Score=29.29 Aligned_cols=36 Identities=17% Similarity=0.073 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
++.+ .++++.+ .|.+-. .+++.|.++||+|+++.-.
T Consensus 5 l~~k-~vlVTGa-sggiG~--~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 5 LKGK-RVLITGS-SQGIGL--ATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp GTTC-EEEETTC-SSHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred CCCC-EEEEeCC-CChHHH--HHHHHHHHCCCEEEEECCC
Confidence 3444 5566644 455543 5789999999999888654
No 384
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=32.12 E-value=44 Score=27.62 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=28.0
Q ss_pred cEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYP---AQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~---~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-+|+++|.- -.--..+...|++.|.++|.+|.|+.+|
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 367777642 1113457899999999999999999998
No 385
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=32.10 E-value=23 Score=31.31 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=42.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEecCccc----cccCCCCceEEEcC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKR--------LASK-RVKATLATTHYTV----KSIHATTVGVEPIS 61 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~--------L~~~-Gh~V~~~~~~~~~----~~~~~~g~~~~~~~ 61 (459)
++.||++.+.++..|-....-++.. |.++ |++|+.++..--. +.+.+.+.+.+-+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~e~~~d~VglS 187 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEADVLLVS 187 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEE
Confidence 3578999999999999999999977 9999 9999998874332 22333456666553
No 386
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=32.01 E-value=47 Score=28.97 Aligned_cols=48 Identities=17% Similarity=0.090 Sum_probs=29.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPI 60 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~ 60 (459)
||.+++|.+ .|-+-. .|++.|.++||+|++..-..... ...++.++..
T Consensus 3 ~k~vlVTGa-sg~IG~--~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~ 50 (267)
T 3rft_A 3 MKRLLVTGA-AGQLGR--VMRERLAPMAEILRLADLSPLDP--AGPNEECVQC 50 (267)
T ss_dssp EEEEEEEST-TSHHHH--HHHHHTGGGEEEEEEEESSCCCC--CCTTEEEEEC
T ss_pred CCEEEEECC-CCHHHH--HHHHHHHhcCCEEEEEecCCccc--cCCCCEEEEc
Confidence 566667643 344553 57899999999999887553322 1334555443
No 387
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=31.95 E-value=1.1e+02 Score=24.27 Aligned_cols=91 Identities=10% Similarity=-0.042 Sum_probs=55.0
Q ss_pred cEEEEEcCCCcc---CHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Q 012645 8 VHVLVLTYPAQG---HINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKT 84 (459)
Q Consensus 8 ~kil~~~~~~~G---H~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (459)
.+++++++|+.| .-.-+..+.++|.+.++++++.+.....+.+ ..++.+..+
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~-~~~v~~~~~------------------------ 75 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTL-GLNTRLYKW------------------------ 75 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTC-CTTEEEESS------------------------
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccC-CCcEEEecC------------------------
Confidence 357888889887 4455677889998888998888765432211 112222211
Q ss_pred hchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEEcc
Q 012645 85 VGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 85 ~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~ 132 (459)
.. . .+++.. ...|++|+.... .+..=|-..|+|.|.+..
T Consensus 76 -~~-~-~~~l~~-----~~ad~~I~~~G~-~t~~Ea~~~G~P~i~~p~ 114 (170)
T 2o6l_A 76 -IP-Q-NDLLGH-----PKTRAFITHGGA-NGIYEAIYHGIPMVGIPL 114 (170)
T ss_dssp -CC-H-HHHHTS-----TTEEEEEECCCH-HHHHHHHHHTCCEEECCC
T ss_pred -CC-H-HHHhcC-----CCcCEEEEcCCc-cHHHHHHHcCCCEEeccc
Confidence 00 0 122211 267999997543 355556688999999754
No 388
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=31.90 E-value=51 Score=28.17 Aligned_cols=40 Identities=25% Similarity=0.225 Sum_probs=26.2
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+..++. |.++++.+ .|-+- ..++++|.++||+|+++.-.
T Consensus 1 m~~~~~~-~~vlVtGa-sggiG--~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 1 MEIKLQG-KVSLVTGS-TRGIG--RAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CCCCCTT-CEEEETTC-SSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CccccCC-CEEEEECC-CchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5544444 45666644 44444 35789999999999988654
No 389
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=31.81 E-value=50 Score=27.56 Aligned_cols=31 Identities=6% Similarity=0.173 Sum_probs=25.1
Q ss_pred cCccceeccCchhhHHHhhhcCCeeecccccc
Q 012645 339 QAVGCFITHCGWNSILEGLSLGVAVVAVPQFS 370 (459)
Q Consensus 339 ~~~~~~I~HGG~gs~~eal~~GvP~li~P~~~ 370 (459)
..++.+|+.||........ .++|+|-++...
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4445599999999999976 579999999754
No 390
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=31.68 E-value=38 Score=28.76 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
||+++++.++. -+- ..+|+.|.++|++|+++.-.
T Consensus 1 Mk~vlVTGas~-gIG--~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASS-GLG--AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTS-HHH--HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCc-hHH--HHHHHHHHHCCCEEEEEeCC
Confidence 67778886653 333 47889999999999888754
No 391
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=31.67 E-value=1e+02 Score=24.55 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEE
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVE 58 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~ 58 (459)
++|||+|+.+++.-. .-+....+.|.+.|++|.+++.... ......|+.+.
T Consensus 1 ~~~ki~il~~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~~-~v~~~~g~~i~ 51 (168)
T 3l18_A 1 ASMKVLFLSADGFED-LELIYPLHRIKEEGHEVYVASFQRG-KITGKHGYSVN 51 (168)
T ss_dssp CCCEEEEECCTTBCH-HHHHHHHHHHHHTTCEEEEEESSSE-EEECTTSCEEE
T ss_pred CCcEEEEEeCCCccH-HHHHHHHHHHHHCCCEEEEEECCCC-EEecCCCcEEe
Confidence 368999998876543 4456677888889999999988642 22233455443
No 392
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=31.63 E-value=1.8e+02 Score=22.93 Aligned_cols=23 Identities=30% Similarity=0.221 Sum_probs=19.8
Q ss_pred HHHHHHHHHhCCCeEEEEecCcc
Q 012645 24 LLQFAKRLASKRVKATLATTHYT 46 (459)
Q Consensus 24 ~~~la~~L~~~Gh~V~~~~~~~~ 46 (459)
...+-+.|+++|+.+.++|+...
T Consensus 32 ~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 32 SLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEECCCc
Confidence 56788999999999999998753
No 393
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=31.46 E-value=31 Score=31.93 Aligned_cols=39 Identities=3% Similarity=-0.051 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCC-CccCH---HHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYP-AQGHI---NPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~-~~GH~---~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|+|.||.++..| |.=|= ..-..+.++|.+.||+|+.+..
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 677899888655 33343 3345688999999999988753
No 394
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=31.41 E-value=46 Score=27.61 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=28.1
Q ss_pred cEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYP---AQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~---~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-+|+++|.- -.--..+..+|++.|.++|.+|.|+.+|
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 467777642 1113467889999999999999999998
No 395
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=31.40 E-value=28 Score=33.79 Aligned_cols=34 Identities=12% Similarity=0.141 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|++|||.|+..|..| ..+|..|.++||+|++...
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 556899999887777 3578899999999987754
No 396
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=31.36 E-value=60 Score=28.00 Aligned_cols=40 Identities=15% Similarity=0.113 Sum_probs=28.3
Q ss_pred HHHHHHHhhcCCCCccEEEeCCCch-------hHHHHHHHcCCceEEEcc
Q 012645 90 LAEVILKYKDSESPVNCIVYDSLLT-------WALDVARQFGIYGAAMMT 132 (459)
Q Consensus 90 ~~~l~~~~~~~~~~~Dlvi~D~~~~-------~~~~~a~~lgiP~v~~~~ 132 (459)
+.++++++. .+||+|++|..-. .|..+.-.+|+|+|.+.=
T Consensus 97 ll~al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 143 (237)
T 3goc_A 97 VLAALDALP---CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAK 143 (237)
T ss_dssp HHHHHHTSS---SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEES
T ss_pred HHHHHHhcC---CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeec
Confidence 344445543 3799999997542 266777889999999864
No 397
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=31.31 E-value=79 Score=26.82 Aligned_cols=50 Identities=20% Similarity=0.182 Sum_probs=29.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEecCccc-cccCCCCceEEEc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKR-VKATLATTHYTV-KSIHATTVGVEPI 60 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~G-h~V~~~~~~~~~-~~~~~~g~~~~~~ 60 (459)
||.++++ |+.|-+- ..|+++|.++| |+|+.++-.... ......++.++..
T Consensus 23 mk~vlVt-GatG~iG--~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~ 74 (236)
T 3qvo_A 23 MKNVLIL-GAGGQIA--RHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMG 74 (236)
T ss_dssp CEEEEEE-TTTSHHH--HHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEEC
T ss_pred ccEEEEE-eCCcHHH--HHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEe
Confidence 5555565 3444444 46789999999 999988754322 1222345555543
No 398
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=31.25 E-value=17 Score=35.74 Aligned_cols=96 Identities=16% Similarity=0.087 Sum_probs=55.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEEEcC--CCCCCCCCCCCCC--HHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVEPIS--DGFDEGGFKQAPS--VKAYLESFK 83 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~ 83 (459)
-++++.-.- =.-++.+|+.|.+.|+++. ++......+++.|+....+. .++++......+. ..-.-..+.
T Consensus 6 G~aLISV~D----K~~iv~lAk~L~~lGf~I~--ATgGTAk~L~e~GI~v~~V~k~TgfPE~l~GRVKTLHP~ihgGiLa 79 (593)
T 1g8m_A 6 QLALLSVSE----KAGLVEFARSLNALGLGLI--ASGGTATALRDAGLPVRDVSDLTGFPEMLGGRVKTLHPAVHAGILA 79 (593)
T ss_dssp CEEEEEESC----CTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHTTCCCEEHHHHHSCCCBGGGTBSSCSHHHHHHHHC
T ss_pred CEEEEEEeC----cHhHHHHHHHHHHCCCEEE--EchHHHHHHHHCCCeEEEeecccCCchhhcCCccccCchhhhhhcc
Confidence 455555443 3447899999999999875 67777788888899888875 3455543222221 221111221
Q ss_pred HhchHHHHHHHHHhhcCCCCccEEEeCCC
Q 012645 84 TVGSRTLAEVILKYKDSESPVNCIVYDSL 112 (459)
Q Consensus 84 ~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~ 112 (459)
+...+.+.++-+. . -.+.|+||++..
T Consensus 80 r~~~~h~~~l~~~-~--I~~iDlVvvNLY 105 (593)
T 1g8m_A 80 RNIPEDNADMNKQ-D--FSLVRVVVCNLY 105 (593)
T ss_dssp CSSHHHHHHHHHT-T--CCCEEEEEEECC
T ss_pred CCCHHHHHHHHHc-C--CCceeEEEEecc
Confidence 2223344444322 1 137799999843
No 399
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=31.15 E-value=26 Score=31.93 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|||.|+..|..|. .+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEEc
Confidence 6899988777774 468889999999999876
No 400
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=31.06 E-value=1.4e+02 Score=25.38 Aligned_cols=98 Identities=17% Similarity=0.121 Sum_probs=0.0
Q ss_pred hhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC-CCCchhhhhhcCCCceEEeeecHH-H
Q 012645 257 DQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENE-NKLPVEFVNSVGETGLVVRWCNQF-E 334 (459)
Q Consensus 257 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~v~v~~~~p~~-~ 334 (459)
.++-++|...+ ...|+-|... .+....++....+-+++-+...-. ...++.+. .....++..+.. .
T Consensus 59 ~~lg~~La~~g---~~lVsGGg~G-----iM~aa~~gAl~~gG~~iGV~~~~P~~~~~~~~~----t~~~~~~~f~~Rk~ 126 (217)
T 1wek_A 59 YRLGRALAEAG---FGVVTGGGPG-----VMEAVNRGAYEAGGVSVGLNIELPHEQKPNPYQ----THALSLRYFFVRKV 126 (217)
T ss_dssp HHHHHHHHHHT---CEEEECSCSH-----HHHHHHHHHHHTTCCEEEEEECCTTCCCCCSCC----SEEEEESCHHHHHH
T ss_pred HHHHHHHHHCC---CEEEeCChhh-----HHHHHHHHHHHcCCCEEEEeeCCcchhhccccC----CcCcccCCHHHHHH
Q ss_pred HhcccCccceeccCchhhHHHhhh----------cCCeeecc
Q 012645 335 VLAHQAVGCFITHCGWNSILEGLS----------LGVAVVAV 366 (459)
Q Consensus 335 lL~~~~~~~~I~HGG~gs~~eal~----------~GvP~li~ 366 (459)
++..-+-..++--||.||.-|... +++|++++
T Consensus 127 ~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll 168 (217)
T 1wek_A 127 LFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLL 168 (217)
T ss_dssp HHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEE
T ss_pred HHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEe
No 401
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=31.05 E-value=74 Score=23.36 Aligned_cols=32 Identities=13% Similarity=0.200 Sum_probs=21.9
Q ss_pred CccEEEeCCCchh--HHHHHHHc-------CCceEEEccch
Q 012645 103 PVNCIVYDSLLTW--ALDVARQF-------GIYGAAMMTNS 134 (459)
Q Consensus 103 ~~Dlvi~D~~~~~--~~~~a~~l-------giP~v~~~~~~ 134 (459)
+||+||.|...+. +..+++++ ++|++.++...
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 7999999976532 45555433 58888887644
No 402
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=31.02 E-value=50 Score=29.44 Aligned_cols=32 Identities=16% Similarity=0.137 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
+|||.|+..|..|. .+|+.|.+.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 58999998777775 468889899999987654
No 403
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=31.00 E-value=38 Score=29.31 Aligned_cols=36 Identities=22% Similarity=0.201 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
...|||.|+-.|..|- .||+.|+++||+|++.....
T Consensus 17 ~~~~kIgiIG~G~mG~-----alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGR-----TMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeCCh
Confidence 4568999997776663 57899999999999876543
No 404
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=30.97 E-value=51 Score=30.05 Aligned_cols=39 Identities=13% Similarity=0.125 Sum_probs=32.4
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEecCcc
Q 012645 8 VHVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATTHYT 46 (459)
Q Consensus 8 ~kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~ 46 (459)
.+|+|++. |+-|-..-...||..|+++|++|.++..+..
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 45655554 7999999999999999999999999987643
No 405
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=30.94 E-value=41 Score=29.63 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+|+++++.++ |-+-. .+|++|.++|++|+...-.
T Consensus 5 ~k~vlVTGas-~gIG~--~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 5 AKVWLVTGAS-SGFGR--AIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCEEEETTTT-SHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEECCC-ChHHH--HHHHHHHHCCCEEEEEeCC
Confidence 5778888655 33433 6789999999999887654
No 406
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=30.90 E-value=38 Score=30.31 Aligned_cols=32 Identities=9% Similarity=0.043 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.|||.|+-.|..|. .+|+.|.++||+|++...
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 37999998888774 678999999999988754
No 407
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=30.86 E-value=42 Score=30.14 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+|+++ |+.|.+-. .++++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~iG~--~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIGN--HMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTHH--HHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHHH--HHHHHHHHCCCcEEEEECCC
Confidence 55544 45565554 57888999999999887653
No 408
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=30.79 E-value=51 Score=28.41 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=30.5
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+|++.++. |+-|-..=.+.||..|+++|++|.++=.+.
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 35555543 688899999999999999999999986553
No 409
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=30.74 E-value=37 Score=31.76 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=28.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|+++-.|-.| +.+|..|+++|++|+++--.
T Consensus 24 ~~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CTTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEECS
T ss_pred cCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 345689999887666 67889999999999998654
No 410
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=30.38 E-value=83 Score=29.89 Aligned_cols=35 Identities=9% Similarity=-0.120 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLAS-KRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~-~Gh~V~~~~~~ 44 (459)
.-|++++|.++.|= - .++|++|++ +|.+|.++.-.
T Consensus 60 ~gKvaLVTGASsGI-G--~AiA~~LA~~~GA~Vv~~~r~ 95 (422)
T 3s8m_A 60 GPKKVLVIGASSGY-G--LASRITAAFGFGADTLGVFFE 95 (422)
T ss_dssp SCSEEEEESCSSHH-H--HHHHHHHHHHHCCEEEEEECC
T ss_pred CCCEEEEECCChHH-H--HHHHHHHHHhCCCEEEEEeCC
Confidence 35788999877652 2 578899999 99999887643
No 411
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=30.37 E-value=41 Score=29.83 Aligned_cols=31 Identities=10% Similarity=0.133 Sum_probs=24.5
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|||.|+.. |..| ..+|+.|.++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 58999877 7666 3578889999999987653
No 412
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=30.35 E-value=67 Score=25.59 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=27.2
Q ss_pred cEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQ-FAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~-la~~L~~~Gh~V~~~~~ 43 (459)
|||+++-+..+|+..-+.. |++.|.+.|++|.+.--
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 6777777777899887665 68888889999877644
No 413
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=30.24 E-value=46 Score=29.89 Aligned_cols=28 Identities=14% Similarity=0.109 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLA 41 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~ 41 (459)
||-|+-.|..|. ++|+.|.++||+|++.
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~ 34 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVW 34 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEE
Confidence 799999998884 6899999999999875
No 414
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=30.23 E-value=44 Score=28.65 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=23.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
||.++++. +.|.+-. .++++|.++||+|+.+.-.
T Consensus 1 Mk~vlVtG-asg~iG~--~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITG-SASGIGA--ALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEET-TTSHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEeC-CCcHHHH--HHHHHHHhCCCEEEEEeCC
Confidence 45566664 4454543 4688999999999988653
No 415
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=30.22 E-value=15 Score=33.07 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|||+++..|+.|- .+|..|.+.||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 7899998888885 5788899999999999865
No 416
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=30.19 E-value=60 Score=27.92 Aligned_cols=34 Identities=15% Similarity=0.065 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
||+++++.++ |-+- ..+|+.|+++|++|+++.-.
T Consensus 1 mk~vlVTGas-~gIG--~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGCA-TGIG--AATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5677777654 3333 46789999999999887643
No 417
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=30.13 E-value=33 Score=29.02 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
..|||.|+..|..|. .+|+.|.+.||+|+++...
T Consensus 27 ~~~~I~iiG~G~~G~-----~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFAR-----SLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHH-----HHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 347899886555443 4688899999999887643
No 418
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=30.10 E-value=42 Score=30.07 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+++.++++ |+.|.+-. .|+++|.++||+|+.+.-..
T Consensus 11 ~~~~vlVT-GatG~iG~--~l~~~L~~~G~~V~~~~r~~ 46 (321)
T 2pk3_A 11 GSMRALIT-GVAGFVGK--YLANHLTEQNVEVFGTSRNN 46 (321)
T ss_dssp --CEEEEE-TTTSHHHH--HHHHHHHHTTCEEEEEESCT
T ss_pred CcceEEEE-CCCChHHH--HHHHHHHHCCCEEEEEecCC
Confidence 45555566 44565553 57889999999999987543
No 419
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=30.09 E-value=1.6e+02 Score=27.99 Aligned_cols=32 Identities=9% Similarity=0.131 Sum_probs=22.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEe
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKR-VKATLAT 42 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~G-h~V~~~~ 42 (459)
.+||||++..|+ .-.+||+.|++.+ .+.+++.
T Consensus 20 ~~m~ilvlG~gg-----re~ala~~l~~s~~v~~v~~~ 52 (442)
T 3lp8_A 20 GSMNVLVIGSGG-----REHSMLHHIRKSTLLNKLFIA 52 (442)
T ss_dssp CCEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEE
T ss_pred CCCEEEEECCCh-----HHHHHHHHHHhCCCCCEEEEE
Confidence 358999998774 4456899998875 3444444
No 420
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=30.00 E-value=31 Score=28.10 Aligned_cols=48 Identities=13% Similarity=0.032 Sum_probs=31.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCccc-cccCCCCceEE
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYTV-KSIHATTVGVE 58 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~~-~~~~~~g~~~~ 58 (459)
.++||+++..|..| ..+|+.|.++ ||+|+++.....+ +.+.+.|+..+
T Consensus 38 ~~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~ 87 (183)
T 3c85_A 38 GHAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVI 87 (183)
T ss_dssp TTCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEE
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEE
Confidence 45789998655544 4568899998 9999988764322 22333455443
No 421
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=29.97 E-value=67 Score=26.62 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=29.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
..++++..|..|...-+..+++.|.++|+.|...-..
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 3466777787888888999999999999998877644
No 422
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=29.92 E-value=37 Score=30.73 Aligned_cols=35 Identities=6% Similarity=0.167 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
++.|+||+. |+.|.+- ..|+++|.++||+|+.+.-
T Consensus 18 ~~~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 18 GSHMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TTCCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred CCCCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 455776655 4455554 3578999999999999875
No 423
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=29.82 E-value=69 Score=28.22 Aligned_cols=40 Identities=25% Similarity=0.208 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhcCCCCccEEEeCCCch------hHHHHHHHcCCceEEEcc
Q 012645 88 RTLAEVILKYKDSESPVNCIVYDSLLT------WALDVARQFGIYGAAMMT 132 (459)
Q Consensus 88 ~~~~~l~~~~~~~~~~~Dlvi~D~~~~------~~~~~a~~lgiP~v~~~~ 132 (459)
..+..++++. +||+|++..-+. .+..+|..||+|++....
T Consensus 102 ~~La~~i~~~-----~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 102 RILTEVIKKE-----APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHH-----CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHhc-----CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 3455566655 799999876552 588999999999998754
No 424
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=29.77 E-value=90 Score=27.29 Aligned_cols=33 Identities=30% Similarity=0.392 Sum_probs=26.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|.++.| +- .++|++|+++|.+|.+..-.
T Consensus 8 KvalVTGas~G-IG--~aia~~la~~Ga~Vv~~~r~ 40 (258)
T 4gkb_A 8 KVVIVTGGASG-IG--GAISMRLAEERAIPVVFARH 40 (258)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCH-HH--HHHHHHHHHcCCEEEEEECC
Confidence 78888987665 22 56789999999999988754
No 425
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=29.72 E-value=2.3e+02 Score=23.18 Aligned_cols=141 Identities=14% Similarity=0.180 Sum_probs=80.4
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcc---cCccceec
Q 012645 270 SVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAH---QAVGCFIT 346 (459)
Q Consensus 270 ~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~---~~~~~~I~ 346 (459)
+.|-|-+||.. +-...++....++..|..+-+-+.+- -..|+... ++.+. -.++++|.
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-HR~p~~l~----------------~~~~~a~~~g~~ViIa 82 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA-HRTPDRLA----------------DYARTAAERGLNVIIA 82 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-TTCHHHHH----------------HHHHHTTTTTCCEEEE
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-cCCHHHHH----------------HHHHHHHhCCCcEEEE
Confidence 46777788765 56678888888899887765554432 22333221 11111 11333776
Q ss_pred cCch----hhHHHhhhcCCeeeccccccc---hhhHHHHHHH--hhhceEE-eeecCCCcccHHHHHHHHHHHhcChhhH
Q 012645 347 HCGW----NSILEGLSLGVAVVAVPQFSD---QPTNAKFVEE--VWEVGVR-AKKNRAGIVTGEELNKCVNEVMDGERSQ 416 (459)
Q Consensus 347 HGG~----gs~~eal~~GvP~li~P~~~D---Q~~na~rv~~--~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 416 (459)
=.|. .++..++ .-+|+|.+|.... -.+--.-+.+ - |+... +...+.+..+...+...|. -+.|+
T Consensus 83 ~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~--- 156 (182)
T 1u11_A 83 GAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNP--- 156 (182)
T ss_dssp EEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCH---
T ss_pred ecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCH---
Confidence 5554 3555555 4789999997542 2222233455 4 44421 1111001456666666654 45677
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 012645 417 KIKRNVSKWREFAKKAVSA 435 (459)
Q Consensus 417 ~~~~~a~~l~~~~~~~~~~ 435 (459)
.++++.+..+++..+.+.+
T Consensus 157 ~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 157 ALAARLETWRALQTASVPN 175 (182)
T ss_dssp HHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999988875433
No 426
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=29.55 E-value=61 Score=31.08 Aligned_cols=34 Identities=29% Similarity=0.247 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
++.+||+|+..|..|= .+|+.|+++||+|+..=.
T Consensus 7 ~~~k~v~viG~G~sG~-----s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSGE-----AAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTHH-----HHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 3557999999877663 459999999999998754
No 427
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=29.50 E-value=66 Score=24.68 Aligned_cols=33 Identities=9% Similarity=0.026 Sum_probs=23.5
Q ss_pred CcEEEEEcCCCccCHH--------HHHHHHHHHHhCCCeEE
Q 012645 7 RVHVLVLTYPAQGHIN--------PLLQFAKRLASKRVKAT 39 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~--------p~~~la~~L~~~Gh~V~ 39 (459)
.||.+++++|=.|... .+-..|..|.++||-+.
T Consensus 7 ~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 7 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 4788899988777732 34456777889999655
No 428
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=29.48 E-value=1.1e+02 Score=26.00 Aligned_cols=46 Identities=13% Similarity=0.093 Sum_probs=32.1
Q ss_pred hhhhhhhhccCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 012645 256 GDQCMRWLATKPEKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLW 303 (459)
Q Consensus 256 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~ 303 (459)
.+.+.+|+.. ...+++|..++...........+.++++++|..++.
T Consensus 21 ~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 21 LPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 5557888863 345999988875333445567788999999876543
No 429
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=29.44 E-value=51 Score=31.30 Aligned_cols=38 Identities=5% Similarity=-0.145 Sum_probs=27.7
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 2 ENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 2 ~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
++.+++.||+++..|.. -..+++++++.|++|.++...
T Consensus 30 ~~~~~~~~IlIlG~G~l-----g~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 30 SPILPGAWLGMVGGGQL-----GRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CCCCTTCEEEEECCSHH-----HHHHHHHHHHTTCEEEEECSC
T ss_pred ccCCCCCEEEEECCCHH-----HHHHHHHHHHCCCEEEEECCC
Confidence 34466779999865533 356788899999999887543
No 430
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=29.42 E-value=24 Score=33.40 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=21.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEE
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLA-SKRVKATLA 41 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~-~~Gh~V~~~ 41 (459)
||+|||+++..|+..| .++.+|+ +.| +|.++
T Consensus 13 ~~~~~vlviG~Ggr~~-----a~a~~~a~~~g-~v~~~ 44 (412)
T 1vkz_A 13 MKAVRVHILGSGGREH-----AIGWAFAKQGY-EVHFY 44 (412)
T ss_dssp ---CEEEEEECSHHHH-----HHHHHHHHTTC-EEEEE
T ss_pred cccCEEEEECCCHHHH-----HHHHHHHhCCC-CEEEE
Confidence 8999999999996664 4677764 457 87777
No 431
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=29.39 E-value=79 Score=24.43 Aligned_cols=39 Identities=8% Similarity=0.072 Sum_probs=25.0
Q ss_pred CCCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 1 MENQRERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 1 m~~~~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|++..+++||+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~ILivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (154)
T 3gt7_A 1 MSLSNRAGEILIVE----DSPTQAEHLKHILEETGYQTEHVRN 39 (154)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEESS
T ss_pred CCcccCCCcEEEEe----CCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 55555678999985 4556667788888888998876643
No 432
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=29.38 E-value=66 Score=28.54 Aligned_cols=32 Identities=19% Similarity=0.117 Sum_probs=23.3
Q ss_pred EEEEEcCCC-ccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 9 HVLVLTYPA-QGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 9 kil~~~~~~-~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
|++++|.++ .|-+- .++|++|+++|++|+++.
T Consensus 9 k~~lVTGas~~~GIG--~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 9 KRAFIAGIADDNGYG--WAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp CEEEEECCSSSSSHH--HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCChH--HHHHHHHHHCCCeEEEee
Confidence 567777665 13344 467899999999998875
No 433
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=29.36 E-value=72 Score=24.74 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=27.1
Q ss_pred cEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEecCc
Q 012645 8 VHVLVLTYPAQGHINPLLQ-FAKRLASKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~-la~~L~~~Gh~V~~~~~~~ 45 (459)
|||+++-+..+|+..-+.. |++.|.++|++|.+.....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 4666665556788766554 6778888899999876554
No 434
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=29.32 E-value=2.9e+02 Score=24.15 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=31.5
Q ss_pred hHHHHHHHHHhhcCCCCccEEEeCCCc---hhHHHHHHHcCCceEEEc
Q 012645 87 SRTLAEVILKYKDSESPVNCIVYDSLL---TWALDVARQFGIYGAAMM 131 (459)
Q Consensus 87 ~~~~~~l~~~~~~~~~~~Dlvi~D~~~---~~~~~~a~~lgiP~v~~~ 131 (459)
...++.+++.+.+ -.+.+.|... ..+..+|+++|+|++.-.
T Consensus 141 ~~~M~~vm~~L~~----~gL~FlDS~Ts~~S~a~~~A~~~gvp~~~rd 184 (261)
T 2qv5_A 141 QSALEPVMRDIGK----RGLLFLDDGSSAQSLSGGIAKAISAPQGFAD 184 (261)
T ss_dssp HHHHHHHHHHHHH----TTCEEEECSCCTTCCHHHHHHHHTCCEEECS
T ss_pred HHHHHHHHHHHHH----CCCEEEcCCCCcccHHHHHHHHcCCCeEEee
Confidence 4466677777754 3799999887 458899999999999943
No 435
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=29.23 E-value=1.4e+02 Score=27.49 Aligned_cols=27 Identities=19% Similarity=0.172 Sum_probs=21.2
Q ss_pred ccCccceeccCchhhH---HHhhhcCCeeecc
Q 012645 338 HQAVGCFITHCGWNSI---LEGLSLGVAVVAV 366 (459)
Q Consensus 338 ~~~~~~~I~HGG~gs~---~eal~~GvP~li~ 366 (459)
+||+ +|++||+-+. ..|-..|+|.++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 5777 9999998765 4566789999863
No 436
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=29.23 E-value=1.5e+02 Score=24.52 Aligned_cols=38 Identities=18% Similarity=0.133 Sum_probs=29.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCcc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYT 46 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~ 46 (459)
+||+|+.+++. ...-+....+.|.+.|++|++++....
T Consensus 3 ~kV~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~~ 40 (205)
T 2ab0_A 3 ASALVCLAPGS-EETEAVTTIDLLVRGGIKVTTASVASD 40 (205)
T ss_dssp CEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEECSST
T ss_pred cEEEEEEcCCC-cHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 47888887766 345566777889999999999998654
No 437
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=29.19 E-value=46 Score=29.65 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+|+|+++ |+.|.+-. .++++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIGK--RIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTTHH--HHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEE--cCCcHHHH--HHHHHHHhCCCcEEEEECC
Confidence 3566655 45566654 4678899999999988765
No 438
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=29.16 E-value=73 Score=26.38 Aligned_cols=37 Identities=16% Similarity=0.255 Sum_probs=26.9
Q ss_pred cEE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHV-LVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~ki-l~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|| +|++.+...+-.....+++.|++.|++|.+++..
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 354 4554555556777888999999999998887754
No 439
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=29.15 E-value=29 Score=33.73 Aligned_cols=34 Identities=12% Similarity=0.213 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|.|++|.|+-.|..|- .||..|+++||+|++...
T Consensus 13 ~~~~~IgvIGlG~MG~-----~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGR-----NLALNIESRGYTVSIFNR 46 (480)
T ss_dssp --CBSEEEECCSHHHH-----HHHHHHHTTTCCEEEECS
T ss_pred cCCCeEEEEccHHHHH-----HHHHHHHhCCCeEEEEeC
Confidence 7899999999888884 589999999999988754
No 440
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=29.15 E-value=99 Score=22.02 Aligned_cols=32 Identities=13% Similarity=0.066 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.+|+++|..+ ......+..|.+.||+|..+..
T Consensus 57 ~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 57 ETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp SEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 5688887443 4577889999999998776543
No 441
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=28.99 E-value=1e+02 Score=28.00 Aligned_cols=82 Identities=15% Similarity=-0.067 Sum_probs=0.0
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceecc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITH 347 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~H 347 (459)
.+-.|++.-.|-.. .....+.+.+++.+..+.+......+...+ +-...+....++ +|.-
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~---------------~~~~~~~~~~d~--vvv~ 89 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGDAAR---------------YVEEARKFGVAT--VIAG 89 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTHHHH---------------HHHHHHHHTCSE--EEEE
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcchHHH---------------HHHHHHhcCCCE--EEEE
Q ss_pred CchhhHHHhh--------hcCCeeeccccc
Q 012645 348 CGWNSILEGL--------SLGVAVVAVPQF 369 (459)
Q Consensus 348 GG~gs~~eal--------~~GvP~li~P~~ 369 (459)
||=||+.|++ ..++|+.++|..
T Consensus 90 GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 90 GGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp ESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred ccchHHHHHHHHHhhcccCCCCeEEEecCc
No 442
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=28.97 E-value=43 Score=27.15 Aligned_cols=35 Identities=11% Similarity=0.274 Sum_probs=28.3
Q ss_pred cEEEEEcCCCcc-----CHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQG-----HINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~G-----H~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-+|+++|. +| -..+...|++.|.++|.+|.|+.+|
T Consensus 31 ~~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 31 HSVIITPG--YGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp SEEEEECS--BHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CeEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 46777764 33 3468899999999999999999998
No 443
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=28.95 E-value=49 Score=29.48 Aligned_cols=49 Identities=8% Similarity=0.168 Sum_probs=29.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccc-cccCCCCceEEEc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTV-KSIHATTVGVEPI 60 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~-~~~~~~g~~~~~~ 60 (459)
||||+. |+.|.+-. .|+++|.++||+|+.+...... ......++.++..
T Consensus 1 m~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~ 50 (312)
T 3ko8_A 1 MRIVVT--GGAGFIGS--HLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVR 50 (312)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECC
T ss_pred CEEEEE--CCCChHHH--HHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEEC
Confidence 565544 45565554 5789999999999988643221 1122345555543
No 444
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=28.90 E-value=53 Score=32.11 Aligned_cols=35 Identities=9% Similarity=0.128 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
.||||+. |+.|-+-. .|++.|.++||+|+.++-..
T Consensus 147 ~m~VLVT--GatG~IG~--~l~~~L~~~G~~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAIT--GSRGLVGR--ALTAQLQTGGHEVIQLVRKE 181 (516)
T ss_dssp CCEEEEE--STTSHHHH--HHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEECCC
Confidence 5777665 45565654 57889999999999988653
No 445
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=28.85 E-value=50 Score=31.51 Aligned_cols=31 Identities=10% Similarity=0.071 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|||.++..|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 688888776666 4688899999999988754
No 446
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=28.57 E-value=48 Score=30.00 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=22.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
+|.++++ |+.|.+-. .|+++|.++||+|+.++-
T Consensus 5 ~~~vlVT-GatGfIG~--~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 5 SETVCVT-GASGFIGS--WLVMRLLERGYTVRATVR 37 (337)
T ss_dssp -CEEEET-TTTSHHHH--HHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE-CCchHHHH--HHHHHHHHCCCEEEEEEC
Confidence 3445565 45565554 578899999999987654
No 447
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=28.53 E-value=31 Score=30.93 Aligned_cols=40 Identities=10% Similarity=0.017 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 6 ERVHVLVLTYPAQG----HINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 6 ~~~kil~~~~~~~G----H~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
.+|||+++..|.-. -+.-...++++|.++||+|..+....
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNE 45 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccC
Confidence 46999999866321 13446688999999999999887754
No 448
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=28.48 E-value=48 Score=30.28 Aligned_cols=36 Identities=11% Similarity=-0.001 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
++.|+|++. |+.|.+-. .|+++|.++||+|+.+.-.
T Consensus 7 ~~~~~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 7 WQGKRVFVT--GHTGFKGG--WLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp HTTCEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred hCCCEEEEE--CCCchHHH--HHHHHHHhCCCeEEEEeCC
Confidence 345666654 55666654 4688899999999998754
No 449
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=28.47 E-value=2.4e+02 Score=22.89 Aligned_cols=144 Identities=16% Similarity=0.188 Sum_probs=77.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceecc
Q 012645 268 EKSVIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITH 347 (459)
Q Consensus 268 ~~~~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~H 347 (459)
+.|.|-|-+||.+ +-...++..+.++..|..+-+.+.+- -..|+.+. +|+ .-...-.++++|.=
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-HR~p~~l~----------~~~---~~a~~~g~~ViIa~ 74 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA-HRMPDEMF----------DYA---EKARERGLRAIIAG 74 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-TTSHHHHH----------HHH---HHHTTTTCSEEEEE
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc-ccCHHHHH----------HHH---HHHHhcCCeEEEEe
Confidence 4567888888865 55677888888999887765554432 22333221 010 00001122235554
Q ss_pred Cch----hhHHHhhhcCCeeecccccc---chhhHHHHHHHhhhceEEeeec--C-CCcccHHHHHHHHHHHhcChhhHH
Q 012645 348 CGW----NSILEGLSLGVAVVAVPQFS---DQPTNAKFVEEVWEVGVRAKKN--R-AGIVTGEELNKCVNEVMDGERSQK 417 (459)
Q Consensus 348 GG~----gs~~eal~~GvP~li~P~~~---DQ~~na~rv~~~~G~G~~~~~~--~-~~~~~~~~l~~~i~~ll~~~~~~~ 417 (459)
.|. .++..++ .-+|+|.+|... +-.+--.-+.++ =-|..+-.- + ++..+..-++..|- -++|+ +
T Consensus 75 AG~aahLpgvvA~~-t~~PVIgVPv~~~~l~G~dsLlSivqM-P~Gvpvatv~i~~~~a~NAallA~~IL-a~~d~---~ 148 (173)
T 4grd_A 75 AGGAAHLPGMLAAK-TTVPVLGVPVASKYLKGVDSLHSIVQM-PKGVPVATFAIGEAGAANAALFAVSIL-SGNSV---D 148 (173)
T ss_dssp EESSCCHHHHHHHH-CCSCEEEEEECCTTTTTHHHHHHHHCC-CTTSCCEECCSSHHHHHHHHHHHHHHH-TTSCH---H
T ss_pred ccccccchhhheec-CCCCEEEEEcCCCCCCchhHHHHHHhC-CCCCCceEEecCCcchHHHHHHHHHHH-cCCCH---H
Confidence 443 3444443 478999999643 333333344444 333323221 0 01234444444442 35677 8
Q ss_pred HHHHHHHHHHHHHHHH
Q 012645 418 IKRNVSKWREFAKKAV 433 (459)
Q Consensus 418 ~~~~a~~l~~~~~~~~ 433 (459)
+++|.++++++.++.+
T Consensus 149 l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 149 YANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998887654
No 450
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=28.41 E-value=42 Score=31.09 Aligned_cols=37 Identities=8% Similarity=0.055 Sum_probs=31.2
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
||++.++. |+-|=..=.+.||..|+++|++|.++=.+
T Consensus 1 MkvIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D 39 (361)
T 3pg5_A 1 MRTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCD 39 (361)
T ss_dssp CEEEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 66766664 68888888999999999999999999665
No 451
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=28.38 E-value=56 Score=28.24 Aligned_cols=29 Identities=10% Similarity=0.083 Sum_probs=21.0
Q ss_pred CccEEEeCCCch--hHHHHHHHcCCceEEEc
Q 012645 103 PVNCIVYDSLLT--WALDVARQFGIYGAAMM 131 (459)
Q Consensus 103 ~~Dlvi~D~~~~--~~~~~a~~lgiP~v~~~ 131 (459)
+||+||...... ....--++.|+|++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 999999876542 23444467899999874
No 452
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=28.37 E-value=61 Score=29.36 Aligned_cols=39 Identities=5% Similarity=-0.049 Sum_probs=33.7
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 7 RVHVLVLTY-PAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 7 ~~kil~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
+.||+-++. |+-|=..-.+.||.+|+++|++|.++=.+.
T Consensus 47 ~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 47 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 467777775 799999999999999999999999987663
No 453
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=28.35 E-value=98 Score=26.62 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.++++.++ |-+- ..+|+.|+++|++|++..-.
T Consensus 5 k~vlVTGas-~giG--~~ia~~l~~~G~~V~~~~r~ 37 (255)
T 2q2v_A 5 KTALVTGST-SGIG--LGIAQVLARAGANIVLNGFG 37 (255)
T ss_dssp CEEEESSCS-SHHH--HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 466777554 4343 46899999999999887653
No 454
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=28.20 E-value=3.3e+02 Score=24.44 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=16.2
Q ss_pred CChhhhhhhhccCCCCcEEEEEeCCc
Q 012645 254 PTGDQCMRWLATKPEKSVIYVSFGSM 279 (459)
Q Consensus 254 ~~~~~l~~~l~~~~~~~~V~vs~Gs~ 279 (459)
.+|++...|...+-+ .+=+++||.
T Consensus 172 T~Peea~~Fv~TgvD--~LAvaiGt~ 195 (306)
T 3pm6_A 172 TTPEESEEFVATGIN--WLAPAFGNV 195 (306)
T ss_dssp CCHHHHHHHHTTTCS--EECCCSSCC
T ss_pred CCHHHHHHHHHcCCC--EEEEEcCcc
Confidence 357778888854433 677788875
No 455
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=28.04 E-value=38 Score=28.93 Aligned_cols=28 Identities=18% Similarity=0.231 Sum_probs=23.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 10 VLVLTYPAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 10 il~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
|+++-.|=.| +.+|..|+++|++|+++=
T Consensus 5 V~IIGaGpaG-----L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAG-----LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHH-----HHHHHHHHHCCCCEEEEE
Confidence 7777766555 788999999999999985
No 456
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=27.98 E-value=37 Score=30.20 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|||.|+-.|..|. .+|+.|.+.||+|++...
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 6788988777775 578899999999987754
No 457
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=27.95 E-value=1.1e+02 Score=27.93 Aligned_cols=81 Identities=11% Similarity=-0.033 Sum_probs=45.7
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCch
Q 012645 271 VIYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGW 350 (459)
Q Consensus 271 ~V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~ 350 (459)
.|++.-.|-.......+..+...++..+..+.+..... . .... .. -........++ +|.-||=
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~-~---~~a~----------~~-~~~~~~~~~d~--vvv~GGD 90 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK-I---GDAT----------LE-AERAMHENYDV--LIAAGGD 90 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS-T---THHH----------HH-HHHHTTTTCSE--EEEEECH
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC-c---chHH----------HH-HHHHhhcCCCE--EEEEcCc
Confidence 34444333222223556778888888877665544321 0 0000 00 11112222344 9999999
Q ss_pred hhHHHhhh------cCCeeecccc
Q 012645 351 NSILEGLS------LGVAVVAVPQ 368 (459)
Q Consensus 351 gs~~eal~------~GvP~li~P~ 368 (459)
||+.|++. .++|+.++|.
T Consensus 91 GTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 91 GTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred hHHHHHHHHHHhCCCCCcEEEecC
Confidence 99999863 4689999996
No 458
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=27.95 E-value=61 Score=27.13 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEecCc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLA-SKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~-~~Gh~V~~~~~~~ 45 (459)
||.++++. +.|-+- ..++++|. ++||+|+.++-..
T Consensus 5 mk~vlVtG-asg~iG--~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 5 YXYITILG-AAGQIA--QXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp CSEEEEES-TTSHHH--HHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEEe-CCcHHH--HHHHHHHHhcCCceEEEEecCc
Confidence 56555553 334443 46788998 8999999887653
No 459
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=27.88 E-value=1.2e+02 Score=26.53 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=22.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
|.++++.++ |-+-. .+|+.|+++|++|+++.
T Consensus 45 k~vlITGas-ggIG~--~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAG-RGIGR--EIAKMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTT-SHHHH--HHHHHHTTTSSEEEEEE
T ss_pred CEEEEECCC-cHHHH--HHHHHHHHcCCEEEEEc
Confidence 566677544 44443 67899999999999865
No 460
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=27.88 E-value=46 Score=31.12 Aligned_cols=35 Identities=17% Similarity=0.105 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|+++-.|-.| +.+|..|+++|++|+++--.
T Consensus 3 ~~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 3 PTTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp CCCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEecC
Confidence 356899999877555 67889999999999998543
No 461
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=27.85 E-value=81 Score=28.44 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.|.+++|.++ |-+- ..+|+.|.++|++|+++.-.
T Consensus 8 ~k~vlVTGas-~gIG--~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 8 GRTAFVTGGA-NGVG--IGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TCEEEEETTT-STHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcCCc-hHHH--HHHHHHHHHCCCEEEEEECC
Confidence 4677777655 3343 46899999999999887654
No 462
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=27.78 E-value=46 Score=29.50 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 789998777666 45789999999999977543
No 463
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=27.76 E-value=82 Score=26.92 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.++++.++ |-+- ..+|++|.++|++|+++.-.
T Consensus 12 k~vlITGas-ggiG--~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGAG-SGIG--LEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 566666544 4343 46899999999999988653
No 464
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=27.76 E-value=46 Score=30.35 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=21.1
Q ss_pred CccEEEeCCCchhHHHHHHHcCCceEEEcc
Q 012645 103 PVNCIVYDSLLTWALDVARQFGIYGAAMMT 132 (459)
Q Consensus 103 ~~Dlvi~D~~~~~~~~~a~~lgiP~v~~~~ 132 (459)
+||+||..........-.++.|+|++.+..
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 899999875433334444678999999753
No 465
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=27.75 E-value=1.1e+02 Score=27.46 Aligned_cols=107 Identities=12% Similarity=0.167 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchhhHHHhhhcCCe
Q 012645 283 AANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWNSILEGLSLGVA 362 (459)
Q Consensus 283 ~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~gs~~eal~~GvP 362 (459)
+.+.-..+++.++..+.++++..+.. ..++..+.+..+..++=. ||++ .=...|.+....|+.+|+.
T Consensus 166 r~~~~~~~~~~l~~~~~DliVlagym-~IL~~~~l~~~~~~~INi----------HpSl--LP~frG~~p~~~Ai~~G~k 232 (302)
T 3o1l_A 166 KEPAFAEVSRLVGHHQADVVVLARYM-QILPPQLCREYAHQVINI----------HHSF--LPSFVGAKPYHQASLRGVK 232 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSCC-SCCCTTHHHHTTTCEEEE----------ESSC--TTSSCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHhCCCEEEHhHhh-hhcCHHHHhhhhCCeEEe----------Cccc--ccCCCCccHHHHHHHcCCC
Confidence 34445567788888888888887765 567777665544333211 2333 3334689999999999999
Q ss_pred eeccccc--cchhhHHHHHHHhhhceEEeeecCCCcccHHHHHHHHHHH
Q 012645 363 VVAVPQF--SDQPTNAKFVEEVWEVGVRAKKNRAGIVTGEELNKCVNEV 409 (459)
Q Consensus 363 ~li~P~~--~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~l 409 (459)
...+-.+ .+..+.+-.+.+. -..+. ...|.++|.+.+.++
T Consensus 233 ~tG~TvH~v~~~lD~GpII~Q~---~v~I~----~~dt~~~L~~r~~~~ 274 (302)
T 3o1l_A 233 LIGATCHYVTEELDAGPIIEQD---VVRVS----HRDSIENMVRFGRDV 274 (302)
T ss_dssp EEEEEEEECCSSTTCSCEEEEE---EEECC----TTCCHHHHHHHHHHH
T ss_pred eEEEEEEEECCCCcCCCeEEEE---EEecC----CCCCHHHHHHHHHHH
Confidence 8777643 2333333222222 11121 256777777776654
No 466
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=27.63 E-value=45 Score=29.23 Aligned_cols=32 Identities=9% Similarity=0.102 Sum_probs=25.6
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 11 LVLTYPAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 11 l~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
+++.+|..|+-.-+..+|+.|+++||+|...-
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~D 85 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPR 85 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEEC
Confidence 44557777887778899999999999987653
No 467
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=27.60 E-value=71 Score=28.73 Aligned_cols=38 Identities=13% Similarity=-0.041 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQG-H---INPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~G-H---~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
++||+++..|-.+ | +..-..++++|.+.||+|..+...
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4688888865332 2 346788999999999999998754
No 468
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=27.59 E-value=90 Score=22.39 Aligned_cols=32 Identities=6% Similarity=-0.024 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
.+|++++..+ ......+..|.+.||+|..+..
T Consensus 57 ~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 57 EIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp SEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 4688887543 3567789999999998876543
No 469
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=27.48 E-value=78 Score=26.56 Aligned_cols=38 Identities=11% Similarity=0.027 Sum_probs=29.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEecCcc
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK-RVKATLATTHYT 46 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~-Gh~V~~~~~~~~ 46 (459)
.||+|+.+++.-.+. +...++.|.++ |++|.+++....
T Consensus 4 ~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 4 KKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp EEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred cEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 578888888777655 44567788877 999999998754
No 470
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=27.44 E-value=53 Score=30.36 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=33.0
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHH--hCCCeEEEEecCc
Q 012645 8 VHVLVLTY-PAQGHINPLLQFAKRLA--SKRVKATLATTHY 45 (459)
Q Consensus 8 ~kil~~~~-~~~GH~~p~~~la~~L~--~~Gh~V~~~~~~~ 45 (459)
++|+|++. |+-|-..-...||..|+ ++|++|.++..+.
T Consensus 18 ~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~ 58 (354)
T 2woj_A 18 HKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDP 58 (354)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 56666654 79999999999999999 9999999999875
No 471
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=27.40 E-value=42 Score=29.79 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
+|||.|+-.|..|. .+|+.|.+.||+|++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 47999998777774 46888999999998665
No 472
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=27.34 E-value=52 Score=30.61 Aligned_cols=39 Identities=15% Similarity=0.083 Sum_probs=33.0
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTY--PAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~--~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+++|++.+.. |+-|=..=.+.||..|+++|++|.++-.+
T Consensus 141 ~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 141 DKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 4677766664 68999999999999999999999999755
No 473
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=27.33 E-value=98 Score=29.07 Aligned_cols=84 Identities=13% Similarity=-0.027 Sum_probs=47.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEecCccc-----------------cccCCCCceEEEcCCCCCCCC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLA-SKRVKATLATTHYTV-----------------KSIHATTVGVEPISDGFDEGG 68 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~-~~Gh~V~~~~~~~~~-----------------~~~~~~g~~~~~~~~~~~~~~ 68 (459)
..|.++++.++.|.= ++.|.+|+ +.|..|..++..... +.+++.|.....++-+...
T Consensus 49 ~pK~vLVtGaSsGiG---lA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d-- 123 (401)
T 4ggo_A 49 APKNVLVLGCSNGYG---LASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFS-- 123 (401)
T ss_dssp CCCEEEEESCSSHHH---HHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTS--
T ss_pred CCCEEEEECCCCcHH---HHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCC--
Confidence 357788887776643 34445555 468887777654321 1223346666655422111
Q ss_pred CCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeCCCc
Q 012645 69 FKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYDSLL 113 (459)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~ 113 (459)
.+.++++++.+.+...+.|++|....+
T Consensus 124 ------------------~e~i~~vi~~i~~~~G~IDiLVhS~A~ 150 (401)
T 4ggo_A 124 ------------------DEIKAQVIEEAKKKGIKFDLIVYSLAS 150 (401)
T ss_dssp ------------------HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred ------------------HHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 234445555555555689999998554
No 474
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=27.31 E-value=32 Score=31.12 Aligned_cols=34 Identities=6% Similarity=0.049 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRV-KATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh-~V~~~~~~ 44 (459)
..|||.|+-.|..| ..+|+.|++.|| +|++....
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 45799999887777 478999999999 89887653
No 475
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=27.25 E-value=90 Score=21.08 Aligned_cols=55 Identities=13% Similarity=0.132 Sum_probs=30.9
Q ss_pred cccHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH-h-cCCCcHHHHHHHHHHHHH
Q 012645 396 IVTGEELNKCVNEVMDGERSQKIKRNVSKWREFAKKAV-S-AGGSSDKNIDEFVVRLLK 452 (459)
Q Consensus 396 ~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~-~-~~g~s~~~~~~~~~~l~~ 452 (459)
..|.++|.++|+++|.+.+-..+.. +++++.+.+.. + +-.+-...+.+.|.....
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tvT~--K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L~ 67 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEVTM--KQICKKVYENYPTYDLTERKDFIKTTVKELIS 67 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHCSSSCCSHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHccCCCChHHHHHHHHHHHHHHh
Confidence 6789999999999998764322222 33444444322 1 112223556666666543
No 476
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=27.23 E-value=58 Score=28.22 Aligned_cols=39 Identities=8% Similarity=0.059 Sum_probs=22.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEec
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATT 43 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~ 43 (459)
|.+++||++.-.-.=-..-+-.....++++|++|++++-
T Consensus 1 ~~~~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~l 39 (242)
T 2ixd_A 1 MSGLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICDL 39 (242)
T ss_dssp -CCCSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEEE
Confidence 345667665543333334444444566678999877753
No 477
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=27.21 E-value=2e+02 Score=25.48 Aligned_cols=82 Identities=12% Similarity=0.070 Sum_probs=53.9
Q ss_pred HHhCCCeEEEEecCccccccCCCCceEEEcCCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCccEEEeC
Q 012645 31 LASKRVKATLATTHYTVKSIHATTVGVEPISDGFDEGGFKQAPSVKAYLESFKTVGSRTLAEVILKYKDSESPVNCIVYD 110 (459)
Q Consensus 31 L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D 110 (459)
|.....+..+++++.+..+.+..|+..+.+... + .. .....+.++++.+++. +..+|+++
T Consensus 185 l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~---~---~e------------ps~~~l~~l~~~ik~~--~v~~If~e 244 (291)
T 1pq4_A 185 LQPLPQRKFIVFHPSWAYFARDYNLVQIPIEVE---G---QE------------PSAQELKQLIDTAKEN--NLTMVFGE 244 (291)
T ss_dssp HTTCSCCEEEESSCCCHHHHHHTTCEEEESCBT---T---BC------------CCHHHHHHHHHHHHTT--TCCEEEEE
T ss_pred HhCCCCCEEEEECCchHHHHHHCCCEEeecccC---C---CC------------CCHHHHHHHHHHHHHc--CCCEEEEe
Confidence 333334556667787888888889998776411 0 11 1123455666666555 78899988
Q ss_pred CCchh--HHHHHHHcCCceEEEcc
Q 012645 111 SLLTW--ALDVARQFGIYGAAMMT 132 (459)
Q Consensus 111 ~~~~~--~~~~a~~lgiP~v~~~~ 132 (459)
..+.. +..+|+..|++.+.+.+
T Consensus 245 ~~~~~~~~~~ia~~~g~~v~~ld~ 268 (291)
T 1pq4_A 245 TQFSTKSSEAIAAEIGAGVELLDP 268 (291)
T ss_dssp TTSCCHHHHHHHHHHTCEEEEECT
T ss_pred CCCChHHHHHHHHHcCCeEEEEcC
Confidence 77643 67789999999987654
No 478
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=27.18 E-value=45 Score=25.37 Aligned_cols=30 Identities=13% Similarity=-0.026 Sum_probs=20.5
Q ss_pred CccEEEeCCCchh--HHHHHH---HcCCceEEEcc
Q 012645 103 PVNCIVYDSLLTW--ALDVAR---QFGIYGAAMMT 132 (459)
Q Consensus 103 ~~Dlvi~D~~~~~--~~~~a~---~lgiP~v~~~~ 132 (459)
+||+||.|...+. +..+++ ..++|+|.++.
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 8999999987643 344444 45888777643
No 479
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=27.14 E-value=1.1e+02 Score=24.75 Aligned_cols=37 Identities=8% Similarity=-0.002 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCC-CccCH---HHHHHHHHHHHhCCCeEEEEe
Q 012645 5 RERVHVLVLTYP-AQGHI---NPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 5 ~~~~kil~~~~~-~~GH~---~p~~~la~~L~~~Gh~V~~~~ 42 (459)
.++||+.+++.| ..|.+ |- .-|++.|.+.|++|....
T Consensus 8 ~~~~~v~Ii~tGdE~g~i~D~n~-~~l~~~L~~~G~~v~~~~ 48 (172)
T 1mkz_A 8 FIPTRIAILTVSNRRGEEDDTSG-HYLRDSAQEAGHHVVDKA 48 (172)
T ss_dssp CCCCEEEEEEECSSCCGGGCHHH-HHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEEEEeCCCCcccCccH-HHHHHHHHHCCCeEeEEE
Confidence 567899888776 45543 32 348999999999987643
No 480
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=27.07 E-value=41 Score=30.57 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=22.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASK--RVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~--Gh~V~~~~~~ 44 (459)
|+.++++ |+.|.+-. .|+++|.++ ||+|+.+.-.
T Consensus 4 m~~vlVT-GatG~iG~--~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 4 FKNIIVT-GGAGFIGS--NFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp CSEEEEE-TTTSHHHH--HHHHHHHHHCTTCEEEEEECC
T ss_pred CcEEEEe-CCccHHHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 4334444 45555544 568888888 8999988753
No 481
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=26.96 E-value=1.1e+02 Score=25.70 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=27.2
Q ss_pred EEEEEcCC---------CccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 9 HVLVLTYP---------AQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 9 kil~~~~~---------~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
||+|+... ..-...-+....+.|.+.|++|++++...
T Consensus 7 kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 7 RVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp EEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 67777662 23334567777888989999999999764
No 482
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=26.92 E-value=58 Score=29.93 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
++|+|+++ |+.|.+-. .|+++|.++||+|+.++-.
T Consensus 4 ~~~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 4 QKKTIAVV--GATGRQGA--SLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCCEEEE--STTSHHHH--HHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEE--CCCCHHHH--HHHHHHHhCCCEEEEEECC
Confidence 35666655 55666654 4678898999999998754
No 483
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=26.82 E-value=80 Score=27.25 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+++++.++ |-+- ..+|+.|.++|++|+++.-.
T Consensus 3 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 35 (258)
T 3a28_C 3 KVAMVTGGA-QGIG--RGISEKLAADGFDIAVADLP 35 (258)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHHTCEEEEEECG
T ss_pred CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 567777554 3333 36789999999999988654
No 484
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=26.65 E-value=56 Score=27.42 Aligned_cols=32 Identities=6% Similarity=-0.044 Sum_probs=26.9
Q ss_pred EEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEE
Q 012645 10 VLVLTY-PAQGHINPLLQFAKRLASKRVKATLA 41 (459)
Q Consensus 10 il~~~~-~~~GH~~p~~~la~~L~~~Gh~V~~~ 41 (459)
|.+.+. |+-|-..=.+.||.+|+++|++|.++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 444443 78999999999999999999999985
No 485
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=26.63 E-value=2.4e+02 Score=22.43 Aligned_cols=133 Identities=18% Similarity=0.185 Sum_probs=72.1
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCCCCchhhhhhcCCCceEEeeecHHHHhcccCccceeccCchh
Q 012645 272 IYVSFGSMADIAANQVDEIARGLKASEKPFLWVVKENENKLPVEFVNSVGETGLVVRWCNQFEVLAHQAVGCFITHCGWN 351 (459)
Q Consensus 272 V~vs~Gs~~~~~~~~~~~i~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~v~~~~p~~~lL~~~~~~~~I~HGG~g 351 (459)
|-|-+||.. +-...++....++..|...-+-+.+- -..|+... ++.+...-+++|.=.|..
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa-HR~p~~~~----------------~~~~~a~~~ViIa~AG~a 62 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA-HRTPELVE----------------EIVKNSKADVFIAIAGLA 62 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-TTCHHHHH----------------HHHHHCCCSEEEEEEESS
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-cCCHHHHH----------------HHHHhcCCCEEEEEcCch
Confidence 445566654 55677888888888887755444432 22333221 122111113366654443
Q ss_pred ----hHHHhhhcCCeeeccccccchhhHHH--HHHH--hhhc--eEEeeecCCCcccHHHHHHHHHHHhcChhhHHHHHH
Q 012645 352 ----SILEGLSLGVAVVAVPQFSDQPTNAK--FVEE--VWEV--GVRAKKNRAGIVTGEELNKCVNEVMDGERSQKIKRN 421 (459)
Q Consensus 352 ----s~~eal~~GvP~li~P~~~DQ~~na~--rv~~--~~G~--G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 421 (459)
++..++ .-+|+|.+|...--..... -+.+ . |+ +...... ..++..+...|- -+.|+ +++++
T Consensus 63 a~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~vqmP~-gvpVatV~I~~---~~nAa~lA~~Il-~~~d~---~l~~k 133 (157)
T 2ywx_A 63 AHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSSVQMPP-GIPVATVGIDR---GENAAILALEIL-ALKDE---NIAKK 133 (157)
T ss_dssp CCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHHHSCCT-TSCCEECCTTC---HHHHHHHHHHHH-TTTCH---HHHHH
T ss_pred hhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHHhcCCC-CCeeEEEecCC---cHHHHHHHHHHH-hcCCH---HHHHH
Confidence 444444 4689999998322122222 2333 3 32 2222112 566666666664 45676 89999
Q ss_pred HHHHHHHHHHH
Q 012645 422 VSKWREFAKKA 432 (459)
Q Consensus 422 a~~l~~~~~~~ 432 (459)
.+..+++.++.
T Consensus 134 l~~~r~~~~~~ 144 (157)
T 2ywx_A 134 LIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999888764
No 486
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=26.53 E-value=62 Score=29.21 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=22.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLAT 42 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~ 42 (459)
|+|++. |+.|.+-. .++++|.++||+|+.+.
T Consensus 1 m~vlVT--GatG~iG~--~l~~~L~~~G~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVT--GGSGYIGS--HTCVQLLQNGHDVIILD 31 (338)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEE
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEe
Confidence 555544 55666654 57899999999999875
No 487
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=26.53 E-value=1.9e+02 Score=23.45 Aligned_cols=50 Identities=18% Similarity=0.093 Sum_probs=33.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCccccccCCCCceEE
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHYTVKSIHATTVGVE 58 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~ 58 (459)
+||+++-.++.- ..-+....+.|.+.|++|++++...........|+.+.
T Consensus 6 kkv~ill~~g~~-~~e~~~~~~~l~~ag~~v~~~s~~~~~~v~~~~g~~i~ 55 (190)
T 4e08_A 6 KSALVILAPGAE-EMEFIIAADVLRRAGIKVTVAGLNGGEAVKCSRDVQIL 55 (190)
T ss_dssp CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESSSSSCEECTTSCEEE
T ss_pred cEEEEEECCCch-HHHHHHHHHHHHHCCCEEEEEECCCCcceecCCCcEEE
Confidence 468777776553 44456667889999999999998753222333455543
No 488
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=26.50 E-value=53 Score=25.45 Aligned_cols=36 Identities=14% Similarity=0.161 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEec
Q 012645 8 VHVLVLTYPAQGHINPLLQ-FAKRLASKRVKATLATT 43 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~-la~~L~~~Gh~V~~~~~ 43 (459)
|||+++-+...|+..-+.. |++.|.+.|++|.+..-
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 5777766666787665543 46667778999987653
No 489
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=26.45 E-value=1.5e+02 Score=27.22 Aligned_cols=88 Identities=13% Similarity=0.071 Sum_probs=54.1
Q ss_pred cEEEEEcCCCccCHH----HHHHHHHHHHhCCCeEEEEecCccccccCC--CCceEEEcCCCCCCCCCCCCCCHHHHHHH
Q 012645 8 VHVLVLTYPAQGHIN----PLLQFAKRLASKRVKATLATTHYTVKSIHA--TTVGVEPISDGFDEGGFKQAPSVKAYLES 81 (459)
Q Consensus 8 ~kil~~~~~~~GH~~----p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (459)
-.++++++|+.+-.. -+..++++|.+.+.+|.+.......+.... .++.+..+-
T Consensus 237 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~-------------------- 296 (400)
T 4amg_A 237 RRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWI-------------------- 296 (400)
T ss_dssp CCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCC--------------------
T ss_pred CcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeec--------------------
Confidence 468889999876443 367788999999999998887654333222 123222110
Q ss_pred HHHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEE
Q 012645 82 FKTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAM 130 (459)
Q Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~ 130 (459)
...+++. +.|++|+.... .+..-|-..|+|.|.+
T Consensus 297 -------p~~~lL~-------~~~~~v~h~G~-~s~~Eal~~GvP~v~~ 330 (400)
T 4amg_A 297 -------PLGALLE-------TCDAIIHHGGS-GTLLTALAAGVPQCVI 330 (400)
T ss_dssp -------CHHHHHT-------TCSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred -------CHHHHhh-------hhhheeccCCc-cHHHHHHHhCCCEEEe
Confidence 0112332 57999987543 3455566789999985
No 490
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=26.44 E-value=84 Score=27.28 Aligned_cols=33 Identities=33% Similarity=0.301 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|.++++.++. -+- ..+++.|.++||+|+++.-.
T Consensus 8 k~vlVTGas~-gIG--~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAAQ-GIG--RAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTTS-HHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC-cHH--HHHHHHHHHCCCEEEEEECC
Confidence 5667775543 333 46789999999999987653
No 491
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=26.41 E-value=44 Score=29.75 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
++|+++-.|..| +..|..|+++|++|+++-..
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 588888877666 67888999999999998764
No 492
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=26.38 E-value=66 Score=28.22 Aligned_cols=33 Identities=6% Similarity=0.009 Sum_probs=26.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 9 HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 9 kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|++++|.++.| +- .++|++|+++|++|.+..-.
T Consensus 12 K~alVTGas~G-IG--~aia~~la~~Ga~V~~~~r~ 44 (261)
T 4h15_A 12 KRALITAGTKG-AG--AATVSLFLELGAQVLTTARA 44 (261)
T ss_dssp CEEEESCCSSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeccCcH-HH--HHHHHHHHHcCCEEEEEECC
Confidence 78999987665 32 57899999999999887643
No 493
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=26.32 E-value=63 Score=28.01 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 7 RVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 7 ~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
+||.++++.++. -+- .++|++|.++|++|+++...
T Consensus 6 ~~k~vlVTGas~-gIG--~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTK-GLG--KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCc-hhH--HHHHHHHHHCCCEEEEEcCC
Confidence 468888886653 333 47899999999999988654
No 494
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=26.28 E-value=63 Score=30.06 Aligned_cols=35 Identities=11% Similarity=-0.041 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecCc
Q 012645 6 ERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTHY 45 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~~ 45 (459)
++|||+++..+ .--..+++++++.||+|..+....
T Consensus 10 ~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 10 AATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCC
Confidence 45799998553 234678999999999998887643
No 495
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.19 E-value=81 Score=27.26 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
-|+++++.++.| +- ..+|++|+++|++|++..-.
T Consensus 8 gk~~lVTGas~g-IG--~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHG-MG--LATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 367777766543 33 47899999999999887653
No 496
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=26.17 E-value=40 Score=31.76 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 VHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
|+|+++-.|..| +..|..|+++|++|+++--.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~~ 32 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFERL 32 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeCC
Confidence 578888877766 77889999999999999543
No 497
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=26.16 E-value=2.6e+02 Score=25.43 Aligned_cols=88 Identities=13% Similarity=0.011 Sum_probs=52.3
Q ss_pred cEEEEEcCCCccCHH--HHHHHHHHHHhCCCeEEEEecCc-cccccCC--CCceEEEcCCCCCCCCCCCCCCHHHHHHHH
Q 012645 8 VHVLVLTYPAQGHIN--PLLQFAKRLASKRVKATLATTHY-TVKSIHA--TTVGVEPISDGFDEGGFKQAPSVKAYLESF 82 (459)
Q Consensus 8 ~kil~~~~~~~GH~~--p~~~la~~L~~~Gh~V~~~~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (459)
.++++++.|+.+.-. -+..++++|.+.+.++.+.+.+. ..+.++. .++.+..+
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~---------------------- 288 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQW---------------------- 288 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESC----------------------
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecC----------------------
Confidence 456777777766544 46677888888888888777653 2222222 12332211
Q ss_pred HHhchHHHHHHHHHhhcCCCCccEEEeCCCchhHHHHHHHcCCceEEE
Q 012645 83 KTVGSRTLAEVILKYKDSESPVNCIVYDSLLTWALDVARQFGIYGAAM 130 (459)
Q Consensus 83 ~~~~~~~~~~l~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~lgiP~v~~ 130 (459)
.. .. +++. ..|++|+..-. .+..=|-.+|+|.|.+
T Consensus 289 ---~~-~~-~ll~-------~ad~~v~~~G~-~t~~Ea~~~G~P~v~~ 323 (402)
T 3ia7_A 289 ---IP-FH-SVLA-------HARACLTHGTT-GAVLEAFAAGVPLVLV 323 (402)
T ss_dssp ---CC-HH-HHHT-------TEEEEEECCCH-HHHHHHHHTTCCEEEC
T ss_pred ---CC-HH-HHHh-------hCCEEEECCCH-HHHHHHHHhCCCEEEe
Confidence 00 11 3333 46999988653 3455566889999986
No 498
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=26.15 E-value=91 Score=25.85 Aligned_cols=38 Identities=16% Similarity=0.027 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEecC
Q 012645 6 ERVHVLVLTYPAQGHI----NPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 6 ~~~kil~~~~~~~GH~----~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.+|+|.+++... +.- .-...|++.|+++||.|++-+.+
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 348898888655 433 44677888899999998877655
No 499
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=26.10 E-value=31 Score=31.95 Aligned_cols=32 Identities=19% Similarity=0.163 Sum_probs=26.6
Q ss_pred c-EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 8 V-HVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 8 ~-kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
| ||.|+-.|..|. .+|..|.+.||+|+++...
T Consensus 15 M~kI~iIG~G~mG~-----~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 15 LNKAVVFGSGAFGT-----ALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEEECCSHHHH-----HHHHHHTTTEEEEEEECSC
T ss_pred cCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEECC
Confidence 5 999998887774 5789999999999988654
No 500
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=26.05 E-value=64 Score=29.03 Aligned_cols=36 Identities=19% Similarity=0.093 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEecC
Q 012645 5 RERVHVLVLTYPAQGHINPLLQFAKRLASKRVKATLATTH 44 (459)
Q Consensus 5 ~~~~kil~~~~~~~GH~~p~~~la~~L~~~Gh~V~~~~~~ 44 (459)
.+.||||+. |+.|-+-. .|+++|.++||+|+.+.-.
T Consensus 12 ~~~~~vlVT--GatG~iG~--~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 12 SMTRSALVT--GITGQDGA--YLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ---CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEE--CCCChHHH--HHHHHHHHCCCeEEEEeCC
Confidence 345676655 45565554 5788999999999998754
Done!