BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>012648
MGVKVANTCLQWTQRIIPQSPSSSQALASAISSPSSKRRSRSSCSSDIGPLVCRYVQGLD
RSALFGPQLAKQPHRSRSCEYYPKPRIQHAVRRTCSASLDAFDENENETNCRDNAVNSES
ESRDSRDGFVDPPWEEDEIIQESIERKANSVDLPLSLRIIKRKLQWQDGFREAGESAYCS
VKKAFSSMVFIIRELHSFTLQMREILFYEDLQGILVRVQREMHASFVWLFQQVFSHTPTL
MVYVMILLANFTVHSMASNTSLAATPPPAAAYHEYASTVEVHNQRRHKFDSSSIKPFSVF
SSRSGKTTSIGGNNGGGGKIRPIGSGTDGDGGIDRVDHFRTIVPDGASQLSSFGTTRDAE
SVSGQVDREEELNLWNSIVDEASQMQVTDESLDHETMERFVSPVTANIEADDYADYFRTE
LLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS

High Scoring Gene Products

Symbol, full name Information P value
AT2G29670 protein from Arabidopsis thaliana 8.0e-91
AT1G07280 protein from Arabidopsis thaliana 1.2e-77
AT3G47080 protein from Arabidopsis thaliana 1.3e-72

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012648
        (459 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2060669 - symbol:AT2G29670 species:3702 "Arabi...   592  8.0e-91   2
TAIR|locus:2025067 - symbol:AT1G07280 "AT1G07280" species...   495  1.2e-77   2
TAIR|locus:2075616 - symbol:AT3G47080 species:3702 "Arabi...   406  1.3e-72   3


>TAIR|locus:2060669 [details] [associations]
            symbol:AT2G29670 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
            InterPro:IPR013026 InterPro:IPR019734 PROSITE:PS50005
            PROSITE:PS50293 EMBL:CP002685 GenomeReviews:CT485783_GR
            Gene3D:1.25.40.10 EMBL:AC005496 EMBL:AF375460 EMBL:AY074336
            EMBL:AY096656 EMBL:BT000642 IPI:IPI00536136 PIR:B84699
            RefSeq:NP_565685.1 UniGene:At.28743 ProteinModelPortal:O82388
            SMR:O82388 EnsemblPlants:AT2G29670.1 GeneID:817517
            KEGG:ath:AT2G29670 TAIR:At2g29670 HOGENOM:HOG000241467
            InParanoid:O82388 OMA:DDESHED PhylomeDB:O82388
            ProtClustDB:CLSN2688551 Genevestigator:O82388 Uniprot:O82388
        Length = 536

 Score = 592 (213.5 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
 Identities = 141/299 (47%), Positives = 172/299 (57%)

Query:     1 MGVKVAN--TCLQWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIGPLVCRYV-Q 57
             MGVKVA+  T LQWT                                     L CR+V Q
Sbjct:     1 MGVKVASSSTFLQWTTQPIIHQSSSPSQTLASGTITSPSKRRSTVHDGRF--LSCRFVTQ 58

Query:    58 GLDRSALFGPQLAKQPHRSRSCEYYP------KPRIQHAVRRTCSASLDAFDENENETNC 111
              L+RSALFG    K  HR +SCE +       +P    + RR  SA+LD F + E     
Sbjct:    59 RLNRSALFGTPSTKL-HRPKSCELWKSSSSSSRPIKTQSFRRVYSANLDPFSDEEFSKKI 117

Query:   112 RDNAVNSESESRDSRDGFVDPPWEEDEIIQESIERKANSVDLPLSLRIIKRKLQWQDGFR 171
             ++  +       D  +  ++PPW E  +   SIE KANSVDLPLSLRIIK+K QW++G +
Sbjct:   118 QELTLRFNIPHHDDDENSIEPPWNE-MVHLSSIEMKANSVDLPLSLRIIKKKRQWEEGVK 176

Query:   172 EAGESAYCSVKKAFSSMVFIIRELHSFTLQMREILFYEDLQGILVRVQREMHASFVWLFQ 231
             +AGESA CS+ KAFSSMVF+IREL SFTL MREILFYEDLQ IL+RV+ EM  SFVWLFQ
Sbjct:   177 QAGESACCSMNKAFSSMVFMIRELQSFTLHMREILFYEDLQEILLRVREEMQQSFVWLFQ 236

Query:   232 QVFSHTPTLMVYVMILLANFTVHSMASNTSLXXXXXXXXXYHEYASTVEVHNQRRHKFD 290
             QVFS TPTLMVYVMILLANFTV+S+ +N+S               +TV    +   KFD
Sbjct:   237 QVFSATPTLMVYVMILLANFTVYSIGNNSSALAAVAPLPPTITELTTVSETEETNVKFD 295

 Score = 333 (122.3 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
 Identities = 71/121 (58%), Positives = 93/121 (76%)

Query:   337 DHFRTIVPDGASQLSS--FGTTRDAESVSGQVDREEELNLWNSIVDEASQMQVT--DESL 392
             + FRTI+P+G SQLSS  FG+     SVSGQ    +E  LWNS+V+EA +MQ +  D+SL
Sbjct:   341 EQFRTIIPEGVSQLSSSNFGSE---PSVSGQ----DEHRLWNSMVEEAERMQYSNIDDSL 393

Query:   393 DHETMERFVSPVTANIEADDYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYD 452
             D ET +RFVS V A +EA++   YF+TEL+YQT L+QEPN+PLLLANYAQFLY+V++D+D
Sbjct:   394 DQETRKRFVSHVEARVEAEEDTGYFKTELMYQTELSQEPNNPLLLANYAQFLYLVSNDHD 453

Query:   453 R 453
             R
Sbjct:   454 R 454

 Score = 50 (22.7 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query:   415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHD 450
             D+ R E  ++  +  EP D    + YA FL+    D
Sbjct:   451 DHDRAEEYFKRAVGVEPKDAEAFSKYATFLWRARDD 486

 Score = 45 (20.9 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query:   415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHD 450
             D +  E  +   +  +P +    ANYA FL+    D
Sbjct:   486 DLWAAEETFLEAIDADPTNSYYAANYANFLWNTGGD 521


>TAIR|locus:2025067 [details] [associations]
            symbol:AT1G07280 "AT1G07280" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0000023
            "maltose metabolic process" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] InterPro:IPR011990
            InterPro:IPR013026 PROSITE:PS50293 EMBL:CP002684 Gene3D:1.25.40.10
            UniGene:At.28743 HOGENOM:HOG000241467 ProtClustDB:CLSN2688551
            EMBL:AY065061 EMBL:AY133574 IPI:IPI00540005 RefSeq:NP_001030984.1
            RefSeq:NP_001117242.1 RefSeq:NP_172208.2 UniGene:At.20235
            ProteinModelPortal:Q8VZC8 SMR:Q8VZC8 EnsemblPlants:AT1G07280.1
            EnsemblPlants:AT1G07280.2 EnsemblPlants:AT1G07280.3 GeneID:837239
            KEGG:ath:AT1G07280 TAIR:At1g07280 InParanoid:Q8VZC8 OMA:EETYLEA
            PhylomeDB:Q8VZC8 Genevestigator:Q8VZC8 Uniprot:Q8VZC8
        Length = 552

 Score = 495 (179.3 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
 Identities = 113/198 (57%), Positives = 137/198 (69%)

Query:   105 NENETNCRDNAVNSESESRD---SRDGF----VDPPWEEDEIIQES-IERKANSVDLPLS 156
             NE E N  D  ++  +   D   S + F    ++PPW E  ++Q S IERKANSVDLPLS
Sbjct:   127 NEEEDNESDTRIDDYTRKMDIVGSHNNFRSDSMEPPWPE--MVQMSNIERKANSVDLPLS 184

Query:   157 LRIIKRKLQWQDG-FREAGESAYCSVKKAFSSMVFIIRELHSFTLQMREILFYEDLQGIL 215
             LRIIKRKLQ ++G   + GESA CSVKKAFSSMVF+IREL SFTL MRE+L +EDLQGIL
Sbjct:   185 LRIIKRKLQMEEGVLNQVGESACCSVKKAFSSMVFMIRELQSFTLHMRELLLFEDLQGIL 244

Query:   216 VRVQREMHASFVWLFQQVFSHTPTLMVYVMILLANFTVHSMASNTSLXXXXXXXXXYH-E 274
              RV++EM ASFVWLFQQVFS TPTLMV VMILLANFTV+S+ SN++L             
Sbjct:   245 HRVRKEMQASFVWLFQQVFSATPTLMVSVMILLANFTVYSIESNSALAAAVSPPTTLSFS 304

Query:   275 YASTVEVHN--QRRHKFD 290
             + +T E+    +   KFD
Sbjct:   305 FETTAEISETQETNQKFD 322

 Score = 305 (112.4 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
 Identities = 64/105 (60%), Positives = 82/105 (78%)

Query:   351 SSFG-TTRDAE-SVSGQVDREEELNLWNSIVDEASQMQVTDESLDHETMERFVSPVTANI 408
             SS G T+ D++ SVSGQ    EE+ LWNSI++E ++M    E+LDHETM+  VSPV A +
Sbjct:   373 SSLGATSADSDVSVSGQ----EEIRLWNSILEETAKM----ETLDHETMKGMVSPVEARL 424

Query:   409 EADDYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDR 453
             EA++  DYF+TELLYQTGL+QEP + LLLANYAQFLY++ HDYDR
Sbjct:   425 EAEESMDYFKTELLYQTGLSQEPGNVLLLANYAQFLYLIIHDYDR 469

 Score = 84 (34.6 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
 Identities = 33/114 (28%), Positives = 56/114 (49%)

Query:    51 LVCRYV---QGLDRSALFGPQLAKQPHRSRSCEYYP---KPRIQHAVRRTCSASLDAFDE 104
             L CR V   Q L+ S+ FG       H S+SCE +    +P+ Q  +RR  SA++D F E
Sbjct:    52 LSCRSVMQSQRLNPSSPFGTSSTNLRH-SKSCELWESTKRPKTQ-LIRRAFSANVDPFSE 109

Query:   105 NENETNCRDNA----VNSESESRDSRDGFVDPPWEEDEIIQESIERKANSVDLP 154
              E     ++      V++E E  +S D  +D    + +I+      +++S++ P
Sbjct:   110 EEFAKKMQELTLKFQVSNEEEDNES-DTRIDDYTRKMDIVGSHNNFRSDSMEPP 162

 Score = 59 (25.8 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query:   415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHD 450
             D +R E  Y   ++ +P + +  ANYA FL+    D
Sbjct:   501 DIWRAEETYLEAISADPTNSVYSANYAHFLWNTGGD 536

 Score = 55 (24.4 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query:   415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHD 450
             DY R E  ++     EP D   L  YA FL+   +D
Sbjct:   466 DYDRAEKYFKRAAKAEPADAEALNKYATFLWRARND 501


>TAIR|locus:2075616 [details] [associations]
            symbol:AT3G47080 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011990
            InterPro:IPR013026 PROSITE:PS50293 EMBL:CP002686
            GenomeReviews:BA000014_GR Gene3D:1.25.40.10 EMBL:AL133292
            HOGENOM:HOG000241467 EMBL:AY039956 EMBL:AY079400 IPI:IPI00548619
            PIR:T45644 RefSeq:NP_190292.1 UniGene:At.22244
            ProteinModelPortal:Q9SD65 SMR:Q9SD65 IntAct:Q9SD65
            EnsemblPlants:AT3G47080.1 GeneID:823861 KEGG:ath:AT3G47080
            TAIR:At3g47080 eggNOG:NOG260732 InParanoid:Q9SD65 OMA:HERAENC
            PhylomeDB:Q9SD65 ProtClustDB:CLSN2915688 ArrayExpress:Q9SD65
            Genevestigator:Q9SD65 Uniprot:Q9SD65
        Length = 515

 Score = 406 (148.0 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
 Identities = 91/173 (52%), Positives = 119/173 (68%)

Query:   100 DAFDENENETNCRDNAVNSESESRDSRDGFV-------------DPPWEEDEIIQESIER 146
             +A DE E E   +  AV+++++S + R G +             + PW E  +   SIER
Sbjct:   127 NAGDEEEEENKQKSEAVDNDNDSNNHRFGSLKLLQESVPGLASLEAPWAE-MVNHSSIER 185

Query:   147 KANSVDLPLSLRIIKRKLQWQDGFREAGESAYCSVKKAFSSMVFIIRELHSFTLQMREIL 206
             KANSVDLPLSLRIIKRKLQ ++  ++A  + YCS+ +AFSSMVF+I ELHSF LQ R   
Sbjct:   186 KANSVDLPLSLRIIKRKLQ-EEALKKASATTYCSINRAFSSMVFMIEELHSFALQTRV-- 242

Query:   207 FYEDLQGILVRVQREMHASFVWLFQQVFSHTPTLMVYVMILLANFTVHSMASN 259
                   G+L +V++EMHAS +W+FQ+VFS TPTLMVYVMILLAN+TVHS+ASN
Sbjct:   243 ------GVLKQVKKEMHASLLWIFQRVFSQTPTLMVYVMILLANYTVHSVASN 289

 Score = 307 (113.1 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
 Identities = 62/100 (62%), Positives = 78/100 (78%)

Query:   357 RDAESVSGQVDREEELNLWNSIVDEASQMQVTDESLDHETMERFVSPVTANIEADDYADY 416
             R  +SVSG+  REEE++LWNS+V+EA QMQ  D S+D +   R VSP+TA IE DDYA+Y
Sbjct:   340 RHRDSVSGEGMREEEVSLWNSMVEEADQMQ--DSSVDRDMRLRLVSPITARIELDDYANY 397

Query:   417 FRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLN 456
              RTELLY+ GLAQEP++ LLLANYAQFLY+V  D++R  N
Sbjct:   398 TRTELLYKIGLAQEPDNHLLLANYAQFLYLVTQDHERAEN 437

 Score = 52 (23.4 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
 Identities = 22/60 (36%), Positives = 27/60 (45%)

Query:    59 LDRSALFGPQLAKQPHRSRSCEYYP-------KPRI----QH-AVRRTCSASLDAFDENE 106
             L  S   G Q  K  HRS+SCE +        K R     +H  +RR CSAS   F  +E
Sbjct:    54 LKPSTFLGTQSGKL-HRSKSCELWQFSNSTTKKIRTDVKKKHNPLRRVCSASSGFFSSDE 112

 Score = 49 (22.3 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
 Identities = 17/66 (25%), Positives = 31/66 (46%)

Query:   393 DHETMER-FVSPVTA-NIEADDYADY------FRTELL-----YQTGLAQEPNDPLLLAN 439
             DHE  E  F   + + +++A+ Y+ Y       R +L      +   ++ +P +    AN
Sbjct:   431 DHERAENCFKKAIESEDVDAETYSKYAIFLWKVRNDLWAAEENFLEAISADPTNSFYAAN 490

Query:   440 YAQFLY 445
             YA FL+
Sbjct:   491 YANFLW 496

 Score = 45 (20.9 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query:   415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHD-YDRYLNFL 458
             D+ R E  ++  +  E  D    + YA FL+ V +D +    NFL
Sbjct:   431 DHERAENCFKKAIESEDVDAETYSKYAIFLWKVRNDLWAAEENFL 475


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      459       373   0.00087  117 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  264 KB (2141 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.44u 0.23s 30.67t   Elapsed:  00:00:01
  Total cpu time:  30.44u 0.23s 30.67t   Elapsed:  00:00:01
  Start:  Sat May 11 02:30:00 2013   End:  Sat May 11 02:30:01 2013

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