Query 012648
Match_columns 459
No_of_seqs 93 out of 102
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 13:32:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012648.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012648hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gcn_A Protein STI-1; structur 96.4 0.003 1E-07 50.5 4.5 44 414-458 22-65 (127)
2 2l6j_A TPR repeat-containing p 96.3 0.0042 1.5E-07 45.6 4.5 45 413-458 17-61 (111)
3 1na3_A Designed protein CTPR2; 96.3 0.0037 1.2E-07 44.5 3.9 44 414-458 23-66 (91)
4 2kc7_A BFR218_protein; tetratr 96.0 0.0057 1.9E-07 45.1 3.9 45 414-459 14-59 (99)
5 3k9i_A BH0479 protein; putativ 96.0 0.0055 1.9E-07 47.3 4.0 44 414-458 41-84 (117)
6 4ga2_A E3 SUMO-protein ligase 95.9 0.0058 2E-07 50.0 3.9 44 414-458 45-88 (150)
7 3ma5_A Tetratricopeptide repea 95.8 0.0069 2.3E-07 46.3 3.7 45 414-459 21-65 (100)
8 4gco_A Protein STI-1; structur 95.8 0.0071 2.4E-07 48.5 3.9 43 415-458 28-70 (126)
9 3upv_A Heat shock protein STI1 95.7 0.01 3.6E-07 45.5 4.5 44 414-458 52-95 (126)
10 2kck_A TPR repeat; tetratricop 95.6 0.011 3.6E-07 42.7 3.8 43 415-458 55-100 (112)
11 3sz7_A HSC70 cochaperone (SGT) 95.5 0.013 4.3E-07 47.4 4.4 45 414-459 59-103 (164)
12 3q49_B STIP1 homology and U bo 95.5 0.011 3.8E-07 45.1 3.9 44 414-458 57-100 (137)
13 2kat_A Uncharacterized protein 95.4 0.013 4.4E-07 44.6 4.0 45 414-459 33-77 (115)
14 2xcb_A PCRH, regulatory protei 95.4 0.015 5E-07 46.4 4.3 45 414-459 66-110 (142)
15 3sz7_A HSC70 cochaperone (SGT) 95.4 0.012 4.1E-07 47.5 3.9 45 414-459 25-69 (164)
16 2e2e_A Formate-dependent nitri 95.4 0.011 3.7E-07 47.9 3.6 41 417-458 98-138 (177)
17 3vtx_A MAMA; tetratricopeptide 95.3 0.013 4.3E-07 47.4 3.9 45 414-459 121-165 (184)
18 1elw_A TPR1-domain of HOP; HOP 95.3 0.016 5.4E-07 42.0 4.0 44 414-458 52-95 (118)
19 1elr_A TPR2A-domain of HOP; HO 95.2 0.022 7.6E-07 41.9 4.6 45 414-459 18-62 (131)
20 2lni_A Stress-induced-phosphop 95.2 0.017 5.8E-07 43.0 3.9 46 413-459 63-108 (133)
21 2xcb_A PCRH, regulatory protei 95.2 0.016 5.4E-07 46.2 3.9 46 413-459 31-76 (142)
22 3gyz_A Chaperone protein IPGC; 95.2 0.015 5E-07 49.2 3.9 44 414-458 84-127 (151)
23 3upv_A Heat shock protein STI1 95.1 0.017 6E-07 44.2 3.9 46 413-459 17-62 (126)
24 3vtx_A MAMA; tetratricopeptide 95.1 0.021 7.3E-07 46.1 4.5 44 414-458 19-62 (184)
25 3gyz_A Chaperone protein IPGC; 95.0 0.015 5E-07 49.3 3.5 47 412-459 48-94 (151)
26 2vgx_A Chaperone SYCD; alterna 95.0 0.021 7.2E-07 46.8 4.3 46 413-459 68-113 (148)
27 2vyi_A SGTA protein; chaperone 95.0 0.027 9.1E-07 41.3 4.5 45 414-459 60-104 (131)
28 3q49_B STIP1 homology and U bo 95.0 0.02 7E-07 43.6 3.9 46 413-459 22-67 (137)
29 1elw_A TPR1-domain of HOP; HOP 95.0 0.029 9.9E-07 40.6 4.5 44 414-458 18-61 (118)
30 2kat_A Uncharacterized protein 95.0 0.017 5.9E-07 43.9 3.4 41 418-459 3-43 (115)
31 3urz_A Uncharacterized protein 94.9 0.02 6.8E-07 48.8 4.0 43 415-458 69-111 (208)
32 2lni_A Stress-induced-phosphop 94.8 0.016 5.5E-07 43.2 2.8 45 414-459 30-74 (133)
33 2vgx_A Chaperone SYCD; alterna 94.8 0.022 7.6E-07 46.7 3.9 46 413-459 34-79 (148)
34 2vyi_A SGTA protein; chaperone 94.8 0.027 9.1E-07 41.3 3.9 43 415-458 27-69 (131)
35 4gco_A Protein STI-1; structur 94.7 0.025 8.6E-07 45.2 3.9 45 414-459 61-105 (126)
36 2dba_A Smooth muscle cell asso 94.5 0.032 1.1E-06 42.5 4.0 45 414-459 79-123 (148)
37 1a17_A Serine/threonine protei 94.4 0.035 1.2E-06 43.1 3.9 44 414-458 61-104 (166)
38 4ga2_A E3 SUMO-protein ligase 94.3 0.024 8.3E-07 46.2 3.1 46 413-458 78-123 (150)
39 1hxi_A PEX5, peroxisome target 94.3 0.047 1.6E-06 43.2 4.6 44 414-458 65-108 (121)
40 1na0_A Designed protein CTPR3; 94.3 0.041 1.4E-06 40.0 3.9 45 414-459 57-101 (125)
41 1na0_A Designed protein CTPR3; 94.3 0.041 1.4E-06 40.0 3.9 30 415-444 92-121 (125)
42 1a17_A Serine/threonine protei 94.2 0.038 1.3E-06 42.9 3.8 45 414-459 27-71 (166)
43 2kck_A TPR repeat; tetratricop 94.1 0.024 8.2E-07 40.8 2.4 45 414-459 20-64 (112)
44 2dba_A Smooth muscle cell asso 94.1 0.048 1.6E-06 41.5 4.1 44 414-458 42-88 (148)
45 1hxi_A PEX5, peroxisome target 94.1 0.041 1.4E-06 43.6 3.8 45 414-459 31-75 (121)
46 2r5s_A Uncharacterized protein 94.0 0.02 6.9E-07 47.0 2.0 45 414-459 20-64 (176)
47 2xev_A YBGF; tetratricopeptide 93.9 0.051 1.7E-06 41.0 3.9 45 414-459 53-100 (129)
48 3rkv_A Putative peptidylprolyl 93.9 0.046 1.6E-06 44.0 3.8 45 414-459 77-121 (162)
49 3u64_A Protein TP_0956; tetrat 93.8 0.02 6.7E-07 56.6 1.9 48 411-458 215-263 (301)
50 1hh8_A P67PHOX, NCF-2, neutrop 93.8 0.049 1.7E-06 44.7 3.9 46 413-459 50-95 (213)
51 2fo7_A Synthetic consensus TPR 93.8 0.062 2.1E-06 39.1 4.0 44 414-458 49-92 (136)
52 2pl2_A Hypothetical conserved 93.8 0.049 1.7E-06 46.7 3.9 44 414-458 98-141 (217)
53 2xev_A YBGF; tetratricopeptide 93.7 0.054 1.8E-06 40.9 3.7 46 413-459 15-63 (129)
54 2e2e_A Formate-dependent nitri 93.7 0.052 1.8E-06 43.9 3.7 46 413-458 57-104 (177)
55 3mkr_A Coatomer subunit epsilo 93.6 0.043 1.5E-06 50.0 3.6 46 413-458 213-258 (291)
56 2ond_A Cleavage stimulation fa 93.5 0.031 1.1E-06 50.2 2.4 43 415-458 184-226 (308)
57 2pl2_A Hypothetical conserved 93.5 0.076 2.6E-06 45.4 4.7 46 413-458 52-107 (217)
58 3qou_A Protein YBBN; thioredox 93.4 0.068 2.3E-06 48.1 4.5 46 413-459 130-175 (287)
59 2fo7_A Synthetic consensus TPR 93.4 0.058 2E-06 39.3 3.4 45 414-459 83-127 (136)
60 3as5_A MAMA; tetratricopeptide 93.3 0.07 2.4E-06 41.3 3.9 43 415-458 125-167 (186)
61 3as5_A MAMA; tetratricopeptide 93.3 0.073 2.5E-06 41.2 4.0 44 414-458 90-133 (186)
62 3k9i_A BH0479 protein; putativ 93.3 0.016 5.6E-07 44.6 0.2 45 414-459 4-51 (117)
63 2ond_A Cleavage stimulation fa 93.1 0.08 2.7E-06 47.5 4.5 43 415-458 114-157 (308)
64 2fbn_A 70 kDa peptidylprolyl i 93.1 0.073 2.5E-06 44.2 3.9 45 414-459 102-146 (198)
65 2c2l_A CHIP, carboxy terminus 93.1 0.081 2.8E-06 47.6 4.5 44 414-458 52-95 (281)
66 3u4t_A TPR repeat-containing p 93.1 0.079 2.7E-06 44.7 4.1 44 414-458 88-131 (272)
67 1xnf_A Lipoprotein NLPI; TPR, 93.0 0.074 2.5E-06 44.6 3.8 44 414-458 91-134 (275)
68 1xnf_A Lipoprotein NLPI; TPR, 92.9 0.082 2.8E-06 44.3 3.9 46 413-459 56-101 (275)
69 2vq2_A PILW, putative fimbrial 92.8 0.065 2.2E-06 43.2 3.1 45 414-458 56-100 (225)
70 4i17_A Hypothetical protein; T 92.8 0.07 2.4E-06 44.7 3.4 45 414-459 56-100 (228)
71 3bee_A Putative YFRE protein; 92.8 0.091 3.1E-06 41.6 3.8 47 412-459 21-67 (93)
72 2r5s_A Uncharacterized protein 92.7 0.094 3.2E-06 43.0 4.0 39 419-458 93-131 (176)
73 4gyw_A UDP-N-acetylglucosamine 92.6 0.072 2.5E-06 56.4 3.9 44 414-458 57-100 (723)
74 3urz_A Uncharacterized protein 92.6 0.14 4.6E-06 43.6 4.9 34 414-447 102-135 (208)
75 3ieg_A DNAJ homolog subfamily 92.4 0.098 3.4E-06 45.0 3.9 46 413-459 285-330 (359)
76 3uq3_A Heat shock protein STI1 92.4 0.11 3.7E-06 42.8 3.9 44 414-458 187-230 (258)
77 2ho1_A Type 4 fimbrial biogene 92.3 0.13 4.5E-06 42.9 4.5 44 414-458 85-128 (252)
78 3u4t_A TPR repeat-containing p 92.2 0.12 4.1E-06 43.6 4.0 43 415-458 18-60 (272)
79 1p5q_A FKBP52, FK506-binding p 92.1 0.1 3.5E-06 48.5 3.9 44 414-458 210-253 (336)
80 1zu2_A Mitochondrial import re 92.1 0.12 4E-06 46.2 4.1 45 415-459 61-115 (158)
81 4eqf_A PEX5-related protein; a 92.1 0.11 3.8E-06 46.3 3.9 42 416-458 263-304 (365)
82 3hym_B Cell division cycle pro 92.0 0.13 4.3E-06 44.1 4.0 46 413-459 172-217 (330)
83 2fbn_A 70 kDa peptidylprolyl i 91.9 0.16 5.4E-06 42.2 4.5 46 413-459 51-112 (198)
84 1wao_1 Serine/threonine protei 91.9 0.11 3.6E-06 51.3 3.9 43 415-458 55-97 (477)
85 3hym_B Cell division cycle pro 91.9 0.12 4.1E-06 44.2 3.7 46 413-459 249-294 (330)
86 1elr_A TPR2A-domain of HOP; HO 91.8 0.064 2.2E-06 39.4 1.8 46 413-459 51-103 (131)
87 4eqf_A PEX5-related protein; a 91.8 0.13 4.3E-06 45.9 3.9 44 414-458 113-156 (365)
88 4i17_A Hypothetical protein; T 91.7 0.14 4.7E-06 42.9 3.8 45 414-459 90-141 (228)
89 2c2l_A CHIP, carboxy terminus 91.5 0.17 5.7E-06 45.6 4.5 44 414-458 18-61 (281)
90 2vq2_A PILW, putative fimbrial 91.5 0.16 5.6E-06 40.8 3.9 42 416-458 163-205 (225)
91 3uq3_A Heat shock protein STI1 91.5 0.16 5.3E-06 41.9 3.9 45 414-459 153-197 (258)
92 2q7f_A YRRB protein; TPR, prot 91.4 0.16 5.3E-06 41.8 3.9 44 414-458 105-148 (243)
93 2vsy_A XCC0866; transferase, g 91.4 0.14 4.6E-06 50.1 4.0 44 414-458 71-114 (568)
94 3ieg_A DNAJ homolog subfamily 91.4 0.16 5.4E-06 43.7 4.0 44 414-458 51-94 (359)
95 2q7f_A YRRB protein; TPR, prot 91.4 0.16 5.5E-06 41.7 3.9 45 414-459 71-115 (243)
96 2ho1_A Type 4 fimbrial biogene 91.2 0.17 5.8E-06 42.3 3.9 44 414-458 189-232 (252)
97 1ihg_A Cyclophilin 40; ppiase 91.1 0.15 5.2E-06 48.7 4.0 45 414-459 287-331 (370)
98 4abn_A Tetratricopeptide repea 91.1 0.13 4.6E-06 50.0 3.7 46 413-459 115-161 (474)
99 4gyw_A UDP-N-acetylglucosamine 91.0 0.14 4.7E-06 54.3 3.9 45 414-459 91-135 (723)
100 4g1t_A Interferon-induced prot 90.5 0.18 6.1E-06 46.4 3.7 47 413-459 347-396 (472)
101 2if4_A ATFKBP42; FKBP-like, al 90.4 0.18 6.2E-06 47.0 3.7 45 414-459 244-288 (338)
102 3cv0_A Peroxisome targeting si 90.3 0.22 7.5E-06 42.5 3.9 43 415-458 221-263 (327)
103 1fch_A Peroxisomal targeting s 90.3 0.22 7.5E-06 43.8 4.0 44 414-458 265-308 (368)
104 2ooe_A Cleavage stimulation fa 90.3 0.2 6.9E-06 48.3 4.0 45 413-458 334-379 (530)
105 3mkr_A Coatomer subunit epsilo 90.2 0.26 9E-06 44.8 4.5 45 414-459 180-224 (291)
106 1fch_A Peroxisomal targeting s 90.1 0.23 7.8E-06 43.7 3.9 46 413-459 230-275 (368)
107 4abn_A Tetratricopeptide repea 90.1 0.17 5.8E-06 49.3 3.3 44 414-458 235-281 (474)
108 1wao_1 Serine/threonine protei 90.0 0.22 7.5E-06 49.1 4.1 46 414-459 88-134 (477)
109 2ooe_A Cleavage stimulation fa 90.0 0.12 4E-06 50.0 2.1 44 414-458 405-448 (530)
110 2vsy_A XCC0866; transferase, g 89.9 0.21 7.3E-06 48.7 3.9 46 414-459 105-152 (568)
111 1hh8_A P67PHOX, NCF-2, neutrop 89.7 0.27 9.1E-06 40.3 3.8 46 413-459 84-145 (213)
112 3fp2_A TPR repeat-containing p 89.7 0.21 7.2E-06 46.4 3.5 44 414-458 73-116 (537)
113 1w3b_A UDP-N-acetylglucosamine 89.6 0.27 9.2E-06 44.3 4.0 43 415-458 286-328 (388)
114 2kc7_A BFR218_protein; tetratr 89.5 0.27 9.2E-06 35.9 3.3 32 413-444 48-81 (99)
115 3rkv_A Putative peptidylprolyl 89.5 0.18 6.2E-06 40.5 2.5 44 414-458 25-86 (162)
116 1kt0_A FKBP51, 51 kDa FK506-bi 89.3 0.3 1E-05 47.5 4.4 45 414-459 331-375 (457)
117 3cv0_A Peroxisome targeting si 89.3 0.3 1E-05 41.7 3.9 46 413-459 185-230 (327)
118 2l6j_A TPR repeat-containing p 89.2 0.34 1.2E-05 35.3 3.6 45 414-459 52-102 (111)
119 1p5q_A FKBP52, FK506-binding p 89.0 0.35 1.2E-05 44.9 4.4 45 414-459 161-220 (336)
120 3qou_A Protein YBBN; thioredox 88.7 0.34 1.2E-05 43.6 4.1 42 416-458 201-242 (287)
121 2y4t_A DNAJ homolog subfamily 88.6 0.33 1.1E-05 44.1 3.9 45 414-459 309-353 (450)
122 2h6f_A Protein farnesyltransfe 88.6 0.3 1E-05 47.2 3.9 42 416-458 148-189 (382)
123 2br9_A 14-3-3E, 14-3-3 protein 88.3 0.4 1.4E-05 45.6 4.4 40 417-456 147-194 (234)
124 1w3b_A UDP-N-acetylglucosamine 88.3 0.41 1.4E-05 43.1 4.3 44 414-458 251-294 (388)
125 4g1t_A Interferon-induced prot 88.2 0.29 9.9E-06 45.0 3.3 42 417-459 413-454 (472)
126 3fp2_A TPR repeat-containing p 88.1 0.37 1.3E-05 44.7 3.9 45 414-459 442-486 (537)
127 3rjv_A Putative SEL1 repeat pr 88.0 0.3 1E-05 41.8 3.1 45 414-459 143-192 (212)
128 4a1s_A PINS, partner of inscut 87.7 0.43 1.5E-05 42.9 4.0 46 413-459 61-110 (411)
129 3qky_A Outer membrane assembly 87.5 0.42 1.4E-05 41.1 3.7 46 413-459 110-172 (261)
130 3qky_A Outer membrane assembly 87.0 0.56 1.9E-05 40.3 4.2 45 414-459 29-76 (261)
131 3iqu_A 14-3-3 protein sigma; s 86.8 0.57 2E-05 44.8 4.5 41 416-456 149-197 (236)
132 3edt_B KLC 2, kinesin light ch 86.6 0.35 1.2E-05 40.1 2.6 45 414-459 141-193 (283)
133 1kt0_A FKBP51, 51 kDa FK506-bi 86.5 0.46 1.6E-05 46.3 3.7 45 414-459 282-341 (457)
134 2y4t_A DNAJ homolog subfamily 86.4 0.65 2.2E-05 42.2 4.5 45 414-459 74-118 (450)
135 4gcn_A Protein STI-1; structur 86.2 0.21 7.3E-06 39.6 1.0 45 414-459 56-107 (127)
136 3ro2_A PINS homolog, G-protein 86.1 0.77 2.6E-05 38.6 4.5 45 413-458 18-66 (338)
137 2pzi_A Probable serine/threoni 86.0 0.42 1.4E-05 49.1 3.3 44 414-458 447-490 (681)
138 2npm_A 14-3-3 domain containin 85.9 0.64 2.2E-05 45.0 4.4 41 416-456 172-219 (260)
139 1ihg_A Cyclophilin 40; ppiase 85.8 0.24 8.1E-06 47.3 1.4 45 414-459 237-297 (370)
140 1o9d_A 14-3-3-like protein C; 85.8 0.66 2.2E-05 44.9 4.4 41 416-456 151-199 (260)
141 3uzd_A 14-3-3 protein gamma; s 85.5 0.69 2.4E-05 44.6 4.4 40 417-456 148-195 (248)
142 2gw1_A Mitochondrial precursor 85.5 0.64 2.2E-05 42.6 4.0 46 413-459 428-473 (514)
143 3edt_B KLC 2, kinesin light ch 85.4 0.27 9.3E-06 40.7 1.4 46 413-459 98-151 (283)
144 2xpi_A Anaphase-promoting comp 85.3 0.6 2.1E-05 44.2 3.8 46 413-459 529-574 (597)
145 3rjv_A Putative SEL1 repeat pr 85.2 0.34 1.2E-05 41.5 1.9 46 414-459 103-153 (212)
146 1qqe_A Vesicular transport pro 84.7 0.4 1.4E-05 42.8 2.2 45 414-459 132-182 (292)
147 1na3_A Designed protein CTPR2; 84.6 1.1 3.8E-05 31.4 4.1 33 414-446 57-89 (91)
148 2o8p_A 14-3-3 domain containin 84.3 0.53 1.8E-05 44.9 2.9 41 416-456 141-189 (227)
149 2h6f_A Protein farnesyltransfe 84.1 0.69 2.4E-05 44.7 3.7 43 415-458 181-223 (382)
150 2if4_A ATFKBP42; FKBP-like, al 83.9 0.33 1.1E-05 45.2 1.3 46 414-459 278-323 (338)
151 2xpi_A Anaphase-promoting comp 83.9 0.79 2.7E-05 43.5 3.9 44 414-458 455-498 (597)
152 3ubw_A 14-3-3E, 14-3-3 protein 83.8 0.91 3.1E-05 44.1 4.4 40 417-456 173-220 (261)
153 1ouv_A Conserved hypothetical 83.8 0.69 2.4E-05 39.7 3.2 43 414-458 56-101 (273)
154 2qfc_A PLCR protein; TPR, HTH, 83.8 1 3.6E-05 39.8 4.5 45 414-459 169-220 (293)
155 2gw1_A Mitochondrial precursor 83.3 0.88 3E-05 41.7 3.9 44 414-458 53-96 (514)
156 1klx_A Cysteine rich protein B 83.1 0.79 2.7E-05 37.3 3.1 42 415-458 76-120 (138)
157 2pzi_A Probable serine/threoni 82.8 0.44 1.5E-05 48.9 1.9 43 414-458 481-523 (681)
158 3nf1_A KLC 1, kinesin light ch 82.3 0.55 1.9E-05 39.7 2.0 45 414-459 167-219 (311)
159 1ouv_A Conserved hypothetical 81.7 0.9 3.1E-05 39.0 3.1 42 415-458 129-173 (273)
160 3sf4_A G-protein-signaling mod 81.6 1.4 5E-05 38.7 4.5 44 414-458 23-70 (406)
161 3ro3_A PINS homolog, G-protein 81.4 0.78 2.7E-05 34.3 2.3 45 413-458 62-112 (164)
162 3qww_A SET and MYND domain-con 81.4 1.2 4.1E-05 44.5 4.3 49 411-459 309-364 (433)
163 2yhc_A BAMD, UPF0169 lipoprote 81.3 1.2 4.2E-05 37.9 3.8 44 414-458 18-64 (225)
164 2v5f_A Prolyl 4-hydroxylase su 81.2 1.8 6.1E-05 33.7 4.4 35 414-448 60-94 (104)
165 3efz_A 14-3-3 protein; 14-3-3, 81.1 0.84 2.9E-05 44.5 3.0 40 417-456 169-218 (268)
166 3u3w_A Transcriptional activat 80.9 0.6 2.1E-05 41.3 1.8 45 414-459 169-220 (293)
167 2uy1_A Cleavage stimulation fa 80.6 1.2 4E-05 44.5 4.0 43 415-458 194-236 (493)
168 1zu2_A Mitochondrial import re 80.2 1.2 4.2E-05 39.6 3.6 48 411-458 13-69 (158)
169 3gw4_A Uncharacterized protein 79.3 0.8 2.7E-05 36.7 1.9 46 413-459 39-90 (203)
170 2ifu_A Gamma-SNAP; membrane fu 79.3 0.87 3E-05 41.0 2.3 44 414-458 129-178 (307)
171 2yhc_A BAMD, UPF0169 lipoprote 78.4 1.8 6.3E-05 36.8 4.0 46 412-458 108-170 (225)
172 3nf1_A KLC 1, kinesin light ch 77.4 0.99 3.4E-05 38.2 2.0 45 414-459 41-93 (311)
173 3ro3_A PINS homolog, G-protein 76.3 0.81 2.8E-05 34.2 1.0 45 414-459 23-73 (164)
174 1klx_A Cysteine rich protein B 76.1 1.8 6.1E-05 35.1 3.1 43 415-459 40-85 (138)
175 3ulq_A Response regulator aspa 75.9 1.5 5E-05 39.9 2.8 46 413-459 237-288 (383)
176 3e4b_A ALGK; tetratricopeptide 75.2 1.4 4.8E-05 42.6 2.6 43 414-459 231-275 (452)
177 3q15_A PSP28, response regulat 73.7 1.6 5.5E-05 39.9 2.5 46 413-459 235-285 (378)
178 1qqe_A Vesicular transport pro 72.3 3.4 0.00012 36.8 4.2 45 414-459 172-223 (292)
179 3u3w_A Transcriptional activat 71.9 1.3 4.6E-05 39.1 1.5 46 414-459 210-261 (293)
180 3gw4_A Uncharacterized protein 71.8 2.2 7.4E-05 34.1 2.6 46 413-459 79-131 (203)
181 2qfc_A PLCR protein; TPR, HTH, 71.5 4.2 0.00014 35.9 4.6 45 414-459 129-179 (293)
182 3qwp_A SET and MYND domain-con 70.9 3.4 0.00012 40.9 4.3 47 413-459 300-353 (429)
183 2v5f_A Prolyl 4-hydroxylase su 69.4 3.5 0.00012 32.0 3.2 46 413-459 18-70 (104)
184 2hr2_A Hypothetical protein; a 68.3 3.3 0.00011 36.8 3.2 45 414-459 71-126 (159)
185 3ro2_A PINS homolog, G-protein 68.2 2 7E-05 36.0 1.7 44 414-458 237-286 (338)
186 4a1s_A PINS, partner of inscut 68.1 2 6.7E-05 38.6 1.7 46 413-459 99-150 (411)
187 1hz4_A MALT regulatory protein 67.8 2.6 8.9E-05 37.8 2.4 45 413-458 106-158 (373)
188 2xm6_A Protein corresponding t 67.7 3.2 0.00011 39.5 3.2 42 415-458 346-390 (490)
189 3sf4_A G-protein-signaling mod 67.5 2.6 8.8E-05 37.1 2.3 44 414-458 241-290 (406)
190 2hr2_A Hypothetical protein; a 67.4 3.3 0.00011 36.9 3.0 45 413-458 24-80 (159)
191 4e6h_A MRNA 3'-END-processing 64.7 2.7 9.3E-05 44.5 2.3 51 408-459 478-528 (679)
192 3n71_A Histone lysine methyltr 64.0 5.4 0.00018 40.5 4.2 48 412-459 321-375 (490)
193 3ulq_A Response regulator aspa 63.7 2.6 8.8E-05 38.3 1.6 45 414-459 198-248 (383)
194 2xm6_A Protein corresponding t 61.1 5 0.00017 38.2 3.1 44 414-459 381-427 (490)
195 3n71_A Histone lysine methyltr 60.3 6.2 0.00021 40.0 3.9 47 412-459 363-417 (490)
196 3qww_A SET and MYND domain-con 58.4 3.6 0.00012 41.1 1.7 47 412-459 352-406 (433)
197 3ffl_A Anaphase-promoting comp 58.0 3.3 0.00011 37.9 1.3 48 411-459 31-87 (167)
198 3qwp_A SET and MYND domain-con 56.9 8.2 0.00028 38.2 4.0 47 412-459 341-395 (429)
199 3e4b_A ALGK; tetratricopeptide 54.8 4.8 0.00016 38.8 1.9 41 415-458 302-345 (452)
200 2ifu_A Gamma-SNAP; membrane fu 54.3 5.3 0.00018 35.9 2.0 44 414-459 90-139 (307)
201 4b4t_Q 26S proteasome regulato 51.7 12 0.00041 33.9 3.9 45 413-458 17-78 (434)
202 3u64_A Protein TP_0956; tetrat 48.5 9.7 0.00033 37.6 3.0 45 415-459 178-228 (301)
203 4e6h_A MRNA 3'-END-processing 47.3 11 0.00037 40.0 3.2 37 421-458 365-401 (679)
204 1hz4_A MALT regulatory protein 47.2 21 0.0007 31.9 4.6 19 415-433 29-47 (373)
205 3ly7_A Transcriptional activat 46.3 14 0.00049 37.1 3.8 44 414-459 291-334 (372)
206 2uy1_A Cleavage stimulation fa 46.2 8.6 0.00029 38.3 2.2 43 415-458 335-377 (493)
207 3bee_A Putative YFRE protein; 36.8 15 0.00051 28.7 1.8 29 430-458 2-32 (93)
208 3q15_A PSP28, response regulat 35.6 16 0.00056 33.2 2.1 46 413-459 195-246 (378)
209 4h7y_A Dual specificity protei 34.1 23 0.0008 32.5 2.8 41 417-459 36-84 (161)
210 2g0u_A Type III secretion syst 32.1 28 0.00096 29.4 2.8 21 426-446 42-62 (92)
211 2ca5_A MXIH; transport protein 26.9 43 0.0015 28.0 3.0 23 424-446 34-56 (85)
No 1
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.41 E-value=0.003 Score=50.48 Aligned_cols=44 Identities=14% Similarity=0.388 Sum_probs=40.1
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|+.+|+|+.++.|-|..++. .++++.|.++|
T Consensus 22 ~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~ 65 (127)
T 4gcn_A 22 KDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFC 65 (127)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHH
Confidence 578899999999999999999999999987765 78999999887
No 2
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.30 E-value=0.0042 Score=45.62 Aligned_cols=45 Identities=18% Similarity=0.251 Sum_probs=38.8
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
-.+|+.+..+|+++|+.+|+|+..+.|+|.-+.. .+|++.|.++|
T Consensus 17 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 61 (111)
T 2l6j_A 17 QGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMC 61 (111)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 3567889999999999999999999999987755 78999998876
No 3
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.28 E-value=0.0037 Score=44.53 Aligned_cols=44 Identities=27% Similarity=0.442 Sum_probs=37.5
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|..+|+++..+.|+|..+.. .+|+++|.++|
T Consensus 23 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 66 (91)
T 1na3_A 23 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYY 66 (91)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 457788899999999999999999999987755 78899998886
No 4
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.02 E-value=0.0057 Score=45.05 Aligned_cols=45 Identities=16% Similarity=0.014 Sum_probs=37.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChH-hHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPL-LLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~L-lL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|+.+|+|+. .+-|.|..++. .+++++|.++|+
T Consensus 14 ~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~ 59 (99)
T 2kc7_A 14 GDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQ 59 (99)
T ss_dssp TCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4677888999999999999998 88899887655 688899988873
No 5
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.01 E-value=0.0055 Score=47.29 Aligned_cols=44 Identities=30% Similarity=0.483 Sum_probs=39.9
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|+.+|+|+.++.|+|.-++. .+++++|.++|
T Consensus 41 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 84 (117)
T 3k9i_A 41 GEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LGRYEQGVELL 84 (117)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 468899999999999999999999999998766 78999999887
No 6
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=95.91 E-value=0.0058 Score=49.96 Aligned_cols=44 Identities=11% Similarity=0.102 Sum_probs=28.6
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|+.+|+|+..+.|.|..+.. .++++.|+++|
T Consensus 45 ~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~~A~~~~ 88 (150)
T 4ga2_A 45 KEYDLAKKYICTYINVQERDPKAHRFLGLLYEL-EENTDKAVECY 88 (150)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCchHHHHHHH
Confidence 455666667777777777777766666665533 56666666665
No 7
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=95.81 E-value=0.0069 Score=46.26 Aligned_cols=45 Identities=9% Similarity=0.076 Sum_probs=40.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|+.+|+++..+-|.|+.+. -.++++.|.++|+
T Consensus 21 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 21 DNASRALALFEELVETDPDYVGTYYHLGKLYE-RLDRTDDAIDTYA 65 (100)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHH
Confidence 56888999999999999999999999998764 5899999999873
No 8
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=95.79 E-value=0.0071 Score=48.49 Aligned_cols=43 Identities=23% Similarity=0.379 Sum_probs=20.5
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+|+.+..+|+++|+.+|+|+.++.|.|..++. .++++.|.++|
T Consensus 28 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~ 70 (126)
T 4gco_A 28 DYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDC 70 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHH
Confidence 34444555555555555555555555544433 34444444443
No 9
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=95.73 E-value=0.01 Score=45.48 Aligned_cols=44 Identities=14% Similarity=0.103 Sum_probs=30.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|..+|+|+..+-|.|..+.. .+|+++|.++|
T Consensus 52 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~ 95 (126)
T 3upv_A 52 MSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYASALETL 95 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhCHHHHHHHH
Confidence 345667777777777777777777777766544 56777777665
No 10
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.61 E-value=0.011 Score=42.68 Aligned_cols=43 Identities=12% Similarity=-0.137 Sum_probs=23.7
Q ss_pred hhhhHHHHHHHhhhcCCC--ChHhHhHHHHHHHHHh-hhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPN--DPLLLANYAQFLYIVA-HDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~--N~LlL~NYAqFL~~V~-~D~drAEeYy 458 (459)
+++.+..+|++++..+|+ ++..+.|.|+.+.. . +|+++|.+||
T Consensus 55 ~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~A~~~~ 100 (112)
T 2kck_A 55 RYEEAVDCYNYVINVIEDEYNKDVWAAKADALRY-IEGKEVEAEIAE 100 (112)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTT-CSSCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-HhCCHHHHHHHH
Confidence 345555556666666666 55555555555432 4 5555555554
No 11
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=95.51 E-value=0.013 Score=47.37 Aligned_cols=45 Identities=7% Similarity=-0.037 Sum_probs=37.5
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|..+|+|+..+-|+|..++. .+|++.|.++|+
T Consensus 59 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 103 (164)
T 3sz7_A 59 GQHEKAAEDAELATVVDPKYSKAWSRLGLARFD-MADYKGAKEAYE 103 (164)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 457778889999999999999999999887755 788999988873
No 12
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=95.51 E-value=0.011 Score=45.12 Aligned_cols=44 Identities=11% Similarity=-0.044 Sum_probs=34.6
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|..+|+|+..+-|.|..+.. .+|++.|.++|
T Consensus 57 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~~~~ 100 (137)
T 3q49_B 57 QQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYDEAIANL 100 (137)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 456778888888888888888888888877655 67888888776
No 13
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=95.44 E-value=0.013 Score=44.60 Aligned_cols=45 Identities=9% Similarity=-0.045 Sum_probs=39.8
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|..+|+++..+.|+|..+.. .+|++.|.++|+
T Consensus 33 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~ 77 (115)
T 2kat_A 33 EQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QGDRAGARQAWE 77 (115)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 467889999999999999999999999988765 789999998873
No 14
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=95.40 E-value=0.015 Score=46.37 Aligned_cols=45 Identities=18% Similarity=0.075 Sum_probs=39.4
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|..+|+|+..+-|+|..+.. .+|++.|.++|+
T Consensus 66 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 110 (142)
T 2xcb_A 66 GLYEQALQSYSYGALMDINEPRFPFHAAECHLQ-LGDLDGAESGFY 110 (142)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 467889999999999999999999999997755 789999998873
No 15
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=95.39 E-value=0.012 Score=47.51 Aligned_cols=45 Identities=20% Similarity=0.293 Sum_probs=39.6
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|..+|+|+.++.|.|..++. .++++.|.++|+
T Consensus 25 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~ 69 (164)
T 3sz7_A 25 KEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAE 69 (164)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 467889999999999999999999999987765 789999998873
No 16
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=95.38 E-value=0.011 Score=47.87 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=22.5
Q ss_pred hhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 417 FRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 417 ~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+.+..+|+++|..+|+|+..+.|+|..++. .+|++.|.++|
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~ 138 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASDAFM-QANYAQAIELW 138 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 455555555555555555555555554433 45555555554
No 17
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.35 E-value=0.013 Score=47.42 Aligned_cols=45 Identities=7% Similarity=-0.021 Sum_probs=40.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|+.+|+|+..+-|.|..+.. .+++++|.++|+
T Consensus 121 g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 165 (184)
T 3vtx_A 121 GEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEG-KGLRDEAVKYFK 165 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHhcchhhhHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 467889999999999999999999999987754 899999999874
No 18
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=95.33 E-value=0.016 Score=41.95 Aligned_cols=44 Identities=11% Similarity=-0.016 Sum_probs=35.1
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++..+.|+|..+.. .+|++.|.++|
T Consensus 52 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 95 (118)
T 1elw_A 52 GDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEF-LNRFEEAKRTY 95 (118)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 456778888888888888888888888876644 67888888876
No 19
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=95.22 E-value=0.022 Score=41.93 Aligned_cols=45 Identities=16% Similarity=0.284 Sum_probs=40.1
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++..+|+++.++.|+|..+.. .+|++.|.+||+
T Consensus 18 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~ 62 (131)
T 1elr_A 18 KDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCE 62 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 467889999999999999999999999998765 789999998873
No 20
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.19 E-value=0.017 Score=43.03 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=40.1
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|++++..+|+++..+-|+|..+. -.+|++.|.++|+
T Consensus 63 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~ 108 (133)
T 2lni_A 63 LLEFQLALKDCEECIQLEPTFIKGYTRKAAALE-AMKDYTKAMDVYQ 108 (133)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HHhhHHHHHHHHH
Confidence 356788999999999999999999999999765 4789999998873
No 21
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=95.17 E-value=0.016 Score=46.18 Aligned_cols=46 Identities=11% Similarity=0.050 Sum_probs=40.5
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+|+.+..+|+++|..+|+|+.++.|.|..+.. .++++.|.++|+
T Consensus 31 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 76 (142)
T 2xcb_A 31 AGKWDDAQKIFQALCMLDHYDARYFLGLGACRQS-LGLYEQALQSYS 76 (142)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 3567889999999999999999999999998754 889999998873
No 22
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.16 E-value=0.015 Score=49.24 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=27.4
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|..+|+|+..+-|.|..+.. .++++.|.++|
T Consensus 84 g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~-lg~~~eA~~~~ 127 (151)
T 3gyz_A 84 EQFQQAADLYAVAFALGKNDYTPVFHTGQCQLR-LKAPLKAKECF 127 (151)
T ss_dssp TCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 345556666666666666666666666665543 56666666665
No 23
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=95.13 E-value=0.017 Score=44.22 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=40.5
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+|..+..+|+++|..+|+|+.++.|.|..++. .+++++|.++|+
T Consensus 17 ~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~ 62 (126)
T 3upv_A 17 KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCN 62 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 3568889999999999999999999999998765 789999998873
No 24
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.09 E-value=0.021 Score=46.09 Aligned_cols=44 Identities=16% Similarity=0.107 Sum_probs=35.6
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|+.||+|+..+.|.|..+.. .+|+++|.++|
T Consensus 19 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~~~~a~~~~ 62 (184)
T 3vtx_A 19 GDFDGAIRAYKKVLKADPNNVETLLKLGKTYMD-IGLPNDAIESL 62 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 467788888999999999999888888886654 67888887765
No 25
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=95.03 E-value=0.015 Score=49.25 Aligned_cols=47 Identities=4% Similarity=0.083 Sum_probs=41.5
Q ss_pred cchhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 412 DYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 412 d~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.-.+|+.+..+|+++|..+|+|+..+.|.|.-+. -.++++.|.++|+
T Consensus 48 ~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 48 NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYA 94 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHH
Confidence 3467899999999999999999999999998765 5899999999873
No 26
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=95.02 E-value=0.021 Score=46.80 Aligned_cols=46 Identities=15% Similarity=0.069 Sum_probs=39.6
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+|+.+..+|+++|..+|+|+..+-|.|..+.. .+|++.|+++|+
T Consensus 68 ~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 113 (148)
T 2vgx_A 68 MGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQ-XGELAEAESGLF 113 (148)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3567889999999999999999999999988754 789999998873
No 27
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.02 E-value=0.027 Score=41.33 Aligned_cols=45 Identities=7% Similarity=0.042 Sum_probs=37.7
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++..+|+++..+-++|..+.. .+|++.|.++|+
T Consensus 60 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 104 (131)
T 2vyi_A 60 GNYAGAVQDCERAICIDPAYSKAYGRMGLALSS-LNKHVEAVAYYK 104 (131)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hchHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 457788899999999999999999999987654 789999988873
No 28
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=94.98 E-value=0.02 Score=43.65 Aligned_cols=46 Identities=13% Similarity=0.098 Sum_probs=40.3
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+|+.+..+|+++|..+|+|+.++.|+|..+.. .+|+++|.++|+
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 67 (137)
T 3q49_B 22 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLK-MQQPEQALADCR 67 (137)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 3567889999999999999999999999998765 889999998873
No 29
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=94.96 E-value=0.029 Score=40.55 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=33.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+|+..+.|+|+.+.. .+|++.|.++|
T Consensus 18 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 61 (118)
T 1elw_A 18 GNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-KGDYQKAYEDG 61 (118)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-hccHHHHHHHH
Confidence 456777788888888888888888888876644 67788887765
No 30
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=94.96 E-value=0.017 Score=43.86 Aligned_cols=41 Identities=20% Similarity=0.133 Sum_probs=36.2
Q ss_pred hHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 418 RTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 418 rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+..+|+++|+.+|+|+..+-|+|..++. .+|++.|+++|+
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 43 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAE-HEQFDAALPHLR 43 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 46789999999999999999999987755 899999999873
No 31
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=94.89 E-value=0.02 Score=48.76 Aligned_cols=43 Identities=21% Similarity=0.263 Sum_probs=23.6
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+++.+..+|+++|+.+|+|+..+.|.|..+.. .++++.|.++|
T Consensus 69 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 111 (208)
T 3urz_A 69 NYDKAYLFYKELLQKAPNNVDCLEACAEMQVC-RGQEKDALRMY 111 (208)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 44555555555555555555555555555432 45555555554
No 32
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=94.81 E-value=0.016 Score=43.17 Aligned_cols=45 Identities=20% Similarity=0.259 Sum_probs=39.1
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++..+|+|+.++.|+|..+. -.+|+++|.++|+
T Consensus 30 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~ 74 (133)
T 2lni_A 30 GDYPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCE 74 (133)
T ss_dssp TCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 35678899999999999999999999998764 4789999998873
No 33
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=94.79 E-value=0.022 Score=46.65 Aligned_cols=46 Identities=13% Similarity=0.135 Sum_probs=40.4
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+|+.+..+|+++|..+|+|+..+.|+|..+. -.++++.|.++|+
T Consensus 34 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~ 79 (148)
T 2vgx_A 34 SGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYS 79 (148)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHH
Confidence 356888999999999999999999999999765 5889999999873
No 34
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=94.77 E-value=0.027 Score=41.33 Aligned_cols=43 Identities=12% Similarity=0.184 Sum_probs=25.0
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+++.+..+|++++..+|+++..+.++|..+.. .+|+++|.++|
T Consensus 27 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 69 (131)
T 2vyi_A 27 NFEAAVHFYGKAIELNPANAVYFCNRAAAYSK-LGNYAGAVQDC 69 (131)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hhchHHHHHHH
Confidence 34555566666666666666666666655533 55666665554
No 35
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=94.69 E-value=0.025 Score=45.25 Aligned_cols=45 Identities=9% Similarity=-0.027 Sum_probs=40.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|+.||+|+..+-|.|..+.. .+|++.|.++|+
T Consensus 61 ~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~~~~~~A~~~~~ 105 (126)
T 4gco_A 61 MEFQRALDDCDTCIRLDSKFIKGYIRKAACLVA-MREWSKAQRAYE 105 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 467889999999999999999999999998755 789999999874
No 36
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.54 E-value=0.032 Score=42.46 Aligned_cols=45 Identities=20% Similarity=0.116 Sum_probs=39.6
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++..+|+|+..+-|+|..++. .+|++.|.++|+
T Consensus 79 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~ 123 (148)
T 2dba_A 79 EDYDKAETEASKAIEKDGGDVKALYRRSQALEK-LGRLDQAVLDLQ 123 (148)
T ss_dssp TCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 467889999999999999999999999997755 789999998873
No 37
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=94.35 E-value=0.035 Score=43.07 Aligned_cols=44 Identities=7% Similarity=-0.234 Sum_probs=31.7
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++..+.|+|..+.. .++++.|.++|
T Consensus 61 ~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 104 (166)
T 1a17_A 61 ECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAALRDY 104 (166)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-hccHHHHHHHH
Confidence 356677777777777777777777777776544 56777777765
No 38
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=94.34 E-value=0.024 Score=46.24 Aligned_cols=46 Identities=13% Similarity=0.108 Sum_probs=37.1
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
-.+++.+..+|+++|+.+|+|+-.+-|+|..+....+..+.|+.|+
T Consensus 78 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~ 123 (150)
T 4ga2_A 78 EENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWV 123 (150)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHH
T ss_pred cCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 3567889999999999999999999999999887555444555543
No 39
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=94.29 E-value=0.047 Score=43.23 Aligned_cols=44 Identities=16% Similarity=0.022 Sum_probs=38.9
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|+.+|+|+-.+-|.|..+. -.+++++|.++|
T Consensus 65 g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~-~~g~~~~A~~~~ 108 (121)
T 1hxi_A 65 EKDGLAIIALNHARMLDPKDIAVHAALAVSHT-NEHNANAALASL 108 (121)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHH
Confidence 46788999999999999999999999999775 478999999876
No 40
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=94.28 E-value=0.041 Score=39.99 Aligned_cols=45 Identities=27% Similarity=0.434 Sum_probs=38.4
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++..+|+++..+.|.|..++. .+|+++|.++|+
T Consensus 57 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~ 101 (125)
T 1na0_A 57 GDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQ 101 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 467788899999999999999999999988765 789999998873
No 41
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=94.28 E-value=0.041 Score=39.99 Aligned_cols=30 Identities=27% Similarity=0.311 Sum_probs=17.9
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHH
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFL 444 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL 444 (459)
+++.+..+|++++..+|+++..+.|.++.+
T Consensus 92 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 92 DYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 345556666666666666666666655544
No 42
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=94.22 E-value=0.038 Score=42.87 Aligned_cols=45 Identities=16% Similarity=0.223 Sum_probs=39.8
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.++..+..+|++++..+|+|+.++.|+|..+.. .+|++.|.++|+
T Consensus 27 ~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~ 71 (166)
T 1a17_A 27 KDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-TECYGYALGDAT 71 (166)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 457889999999999999999999999998755 789999998873
No 43
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=94.14 E-value=0.024 Score=40.76 Aligned_cols=45 Identities=13% Similarity=0.315 Sum_probs=40.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++..+|+++..+.|+|..++. .+++++|.++|+
T Consensus 20 ~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~ 64 (112)
T 2kck_A 20 GNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYN 64 (112)
T ss_dssp CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 567889999999999999999999999998765 689999998873
No 44
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.10 E-value=0.048 Score=41.49 Aligned_cols=44 Identities=23% Similarity=0.219 Sum_probs=38.5
Q ss_pred hhhhhHHHHHHHhhhcCCCC---hHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPND---PLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N---~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|..+..+|++++..+|++ +.++.|+|..++. .+|+++|.++|
T Consensus 42 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 88 (148)
T 2dba_A 42 GDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLK-LEDYDKAETEA 88 (148)
T ss_dssp TCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HccHHHHHHHH
Confidence 45778899999999999998 8999999987655 78999999887
No 45
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=94.09 E-value=0.041 Score=43.60 Aligned_cols=45 Identities=11% Similarity=0.026 Sum_probs=39.7
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|..+|+|+..+-+.|..+.. .++++.|+++|+
T Consensus 31 g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~g~~~~A~~~~~ 75 (121)
T 1hxi_A 31 ANLAEAALAFEAVCQKEPEREEAWRSLGLTQAE-NEKDGLAIIALN 75 (121)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 467889999999999999999999999997754 799999998873
No 46
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=94.03 E-value=0.02 Score=47.01 Aligned_cols=45 Identities=11% Similarity=0.008 Sum_probs=39.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|..+|+|+-.+.|+|..+. -.++++.|+++|+
T Consensus 20 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~~~ 64 (176)
T 2r5s_A 20 GEHAQALNVIQTLSDELQSRGDVKLAKADCLL-ETKQFELAQELLA 64 (176)
T ss_dssp TCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHH-HTTCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HCCCHHHHHHHHH
Confidence 46788999999999999999999999998875 4789999998874
No 47
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=93.91 E-value=0.051 Score=40.99 Aligned_cols=45 Identities=11% Similarity=0.044 Sum_probs=38.8
Q ss_pred hhhhhHHHHHHHhhhcCCCC---hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPND---PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N---~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|..+|++ +..+-+.|..++. .+|++.|.++|+
T Consensus 53 ~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~ 100 (129)
T 2xev_A 53 RNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQ 100 (129)
T ss_dssp TCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 56788999999999999999 7778899987764 789999998873
No 48
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=93.89 E-value=0.046 Score=43.97 Aligned_cols=45 Identities=20% Similarity=0.064 Sum_probs=38.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|..+|+|+-.+-+.|+.++. .++++.|.++|+
T Consensus 77 ~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~-~g~~~~A~~~~~ 121 (162)
T 3rkv_A 77 GDLHEAEETSSEVLKREETNEKALFRRAKARIA-AWKLDEAEEDLK 121 (162)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH-HhcHHHHHHHHH
Confidence 457788999999999999999999999987755 689999988773
No 49
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=93.85 E-value=0.02 Score=56.57 Aligned_cols=48 Identities=13% Similarity=0.020 Sum_probs=43.6
Q ss_pred ccchhhhhHHHHHHHhhhcCCCC-hHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 411 DDYADYFRTELLYQTGLAQEPND-PLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 411 dd~~~~~rtE~~Yk~~I~~dP~N-~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.-..+.++++.+|+|+|+.+||+ ...+--||+||..-.+|++.|+.|+
T Consensus 215 ~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L 263 (301)
T 3u64_A 215 SFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEAL 263 (301)
T ss_dssp TTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHH
Confidence 44788999999999999999975 9999999999988889999999886
No 50
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=93.79 E-value=0.049 Score=44.68 Aligned_cols=46 Identities=11% Similarity=0.197 Sum_probs=40.5
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+++.+..+|+++|..+|+++..+.|.|..+.. .++++.|.++|+
T Consensus 50 ~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~ 95 (213)
T 1hh8_A 50 LKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TEKYDLAIKDLK 95 (213)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cccHHHHHHHHH
Confidence 3567889999999999999999999999987765 889999998873
No 51
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=93.77 E-value=0.062 Score=39.12 Aligned_cols=44 Identities=25% Similarity=0.403 Sum_probs=35.8
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++..+.++|..+.. .+|+++|.++|
T Consensus 49 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 92 (136)
T 2fo7_A 49 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYY 92 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 457778888999999999998888888886644 78888888876
No 52
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=93.75 E-value=0.049 Score=46.68 Aligned_cols=44 Identities=9% Similarity=-0.036 Sum_probs=35.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|+.+|+|+..+.|.|..+.. .+++++|+++|
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~-~g~~~~A~~~~ 141 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYAL-LGERDKAEASL 141 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-cCChHHHHHHH
Confidence 667788888888888888888888888886644 77888887776
No 53
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=93.73 E-value=0.054 Score=40.85 Aligned_cols=46 Identities=15% Similarity=0.122 Sum_probs=38.8
Q ss_pred chhhhhHHHHHHHhhhcCCCCh---HhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDP---LLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~---LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+|+.+..+|++++..+|+++ ..+-+.|..++. .+|++.|.++|+
T Consensus 15 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~ 63 (129)
T 2xev_A 15 NGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFR 63 (129)
T ss_dssp TTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 3568889999999999999999 578888886654 899999998873
No 54
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=93.67 E-value=0.052 Score=43.85 Aligned_cols=46 Identities=24% Similarity=0.300 Sum_probs=42.2
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhH--HHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDY--DRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~--drAEeYy 458 (459)
..+++.+..+|++++..+|+|+.++.|+|..|+.-.+++ +.|.++|
T Consensus 57 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~ 104 (177)
T 2e2e_A 57 QNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMI 104 (177)
T ss_dssp TTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHH
Confidence 357889999999999999999999999999988888998 9999887
No 55
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=93.64 E-value=0.043 Score=49.96 Aligned_cols=46 Identities=15% Similarity=0.156 Sum_probs=38.5
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
-..++.++.+|+++|+.+|+|+-.|.|++..+....++.+.|++||
T Consensus 213 ~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~ 258 (291)
T 3mkr_A 213 QGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYL 258 (291)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4578889999999999999999999999988877655556677776
No 56
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=93.54 E-value=0.031 Score=50.17 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=24.4
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+++.+...|+++|+.+|+++.++.||++|+.. .+|+++|.++|
T Consensus 184 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~g~~~~A~~~~ 226 (308)
T 2ond_A 184 DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH-LNEDNNTRVLF 226 (308)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 44555556666666666666666666665533 45555555554
No 57
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=93.49 E-value=0.076 Score=45.45 Aligned_cols=46 Identities=11% Similarity=-0.137 Sum_probs=39.9
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHh----------hhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVA----------HDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~----------~D~drAEeYy 458 (459)
-.+++.+..+|+++|+.+|+|+..+.|+|..+.... +|+++|+++|
T Consensus 52 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~ 107 (217)
T 2pl2_A 52 LGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVL 107 (217)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHH
Confidence 356788999999999999999999999999886642 9999999877
No 58
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=93.44 E-value=0.068 Score=48.14 Aligned_cols=46 Identities=11% Similarity=0.005 Sum_probs=40.7
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|+++++.+|+|+-.+.|.|+.+. -.++++.|+++|+
T Consensus 130 ~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~l~ 175 (287)
T 3qou_A 130 ESNYTDALPLLXDAWQLSNQNGEIGLLLAETLI-ALNRSEDAEAVLX 175 (287)
T ss_dssp TTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH-HTTCHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHH-HCCCHHHHHHHHH
Confidence 467888999999999999999999999999765 5899999998874
No 59
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=93.43 E-value=0.058 Score=39.25 Aligned_cols=45 Identities=24% Similarity=0.395 Sum_probs=39.5
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++..+|+++..+.+.|..+.. .+|+++|.++|+
T Consensus 83 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~ 127 (136)
T 2fo7_A 83 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYYQ 127 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-HccHHHHHHHHH
Confidence 467889999999999999999999999988765 789999998873
No 60
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=93.34 E-value=0.07 Score=41.33 Aligned_cols=43 Identities=12% Similarity=0.039 Sum_probs=27.5
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+++.+..+|++++..+|+++..+.+.|..++. .+|+++|.++|
T Consensus 125 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~ 167 (186)
T 3as5_A 125 RFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQ-MGRHEEALPHF 167 (186)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCccchHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 45556666666666666666666666665543 56666666665
No 61
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=93.34 E-value=0.073 Score=41.22 Aligned_cols=44 Identities=11% Similarity=-0.010 Sum_probs=30.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++..+.++|+.+.. .+|++.|.++|
T Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 133 (186)
T 3as5_A 90 QKYDLAVPLLIKVAEANPINFNVRFRLGVALDN-LGRFDEAIDSF 133 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHH-cCcHHHHHHHH
Confidence 345666777777777777777777777766543 66777777665
No 62
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=93.27 E-value=0.016 Score=44.58 Aligned_cols=45 Identities=9% Similarity=0.041 Sum_probs=37.4
Q ss_pred hhhhhHHHHHHHhhhc---CCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQ---EPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~---dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|+. +|+++..+.|.|..++. .++++.|.++|+
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~ 51 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLA 51 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4577899999999999 69999999999987754 899999999873
No 63
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=93.14 E-value=0.08 Score=47.49 Aligned_cols=43 Identities=23% Similarity=0.286 Sum_probs=26.5
Q ss_pred hhhhHHHHHHHhhhcCCCChH-hHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPL-LLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~L-lL~NYAqFL~~V~~D~drAEeYy 458 (459)
+++.+...|+++|+.+|+|+- ++-||++|+.. .++++.|.++|
T Consensus 114 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~ 157 (308)
T 2ond_A 114 KYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIF 157 (308)
T ss_dssp CHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-HHCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccccCccHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 455666666666666666663 66666666644 45566665554
No 64
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=93.13 E-value=0.073 Score=44.19 Aligned_cols=45 Identities=13% Similarity=-0.083 Sum_probs=38.1
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|..+|+|+..+-|.|..+.. .+|++.|.++|+
T Consensus 102 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~ 146 (198)
T 2fbn_A 102 KDYPKAIDHASKVLKIDKNNVKALYKLGVANMY-FGFLEEAKENLY 146 (198)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-cccHHHHHHHHH
Confidence 467888899999999999999999999988754 788999988873
No 65
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=93.09 E-value=0.081 Score=47.64 Aligned_cols=44 Identities=11% Similarity=-0.044 Sum_probs=32.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|+.+|+|+..+-|+|..+.. .+++++|+++|
T Consensus 52 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~ 95 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYDEAIANL 95 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 356667777888888888888777777776643 67778887776
No 66
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=93.08 E-value=0.079 Score=44.66 Aligned_cols=44 Identities=7% Similarity=0.210 Sum_probs=31.7
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++++.+|+++..+.|.|..+.. .+|+++|.++|
T Consensus 88 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 131 (272)
T 3u4t_A 88 GQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYN-KGNFPLAIQYM 131 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-ccCHHHHHHHH
Confidence 456677777777777777777777777776654 67777777766
No 67
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=92.99 E-value=0.074 Score=44.59 Aligned_cols=44 Identities=14% Similarity=0.060 Sum_probs=31.7
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|..+|+|+..+.|.|..+.. .+|+++|.++|
T Consensus 91 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 134 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY-GGRDKLAQDDL 134 (275)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH-hccHHHHHHHH
Confidence 456667777777777777777777777776654 67777777765
No 68
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=92.90 E-value=0.082 Score=44.30 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=40.7
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|+++|..+|+|+..+.+.|..+.. .+|+++|.++|+
T Consensus 56 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~ 101 (275)
T 1xnf_A 56 LGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AGNFDAAYEAFD 101 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 3577889999999999999999999999997755 789999999873
No 69
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=92.84 E-value=0.065 Score=43.20 Aligned_cols=45 Identities=13% Similarity=0.205 Sum_probs=28.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++..+.++|..+....+|+++|.++|
T Consensus 56 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~ 100 (225)
T 2vq2_A 56 KVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYF 100 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 345566666777777777777666666666544226666666665
No 70
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=92.82 E-value=0.07 Score=44.68 Aligned_cols=45 Identities=9% Similarity=0.085 Sum_probs=39.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|..+|+++..+.|.|..+.. .+|+++|.++|+
T Consensus 56 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 100 (228)
T 4i17_A 56 KKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-MKNNQEYIATLT 100 (228)
T ss_dssp TCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-cccHHHHHHHHH
Confidence 467889999999999999999999999987755 789999998873
No 71
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.79 E-value=0.091 Score=41.60 Aligned_cols=47 Identities=19% Similarity=0.194 Sum_probs=39.6
Q ss_pred cchhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 412 DYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 412 d~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
+....+.+..+++++|..||+|+--+-..|.-.++ .+||++|.+||+
T Consensus 21 ~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~ 67 (93)
T 3bee_A 21 KQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWV 67 (93)
T ss_dssp TTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 33346788899999999999999998888887766 999999999873
No 72
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=92.73 E-value=0.094 Score=43.01 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=30.8
Q ss_pred HHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 419 TELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 419 tE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+..+|+++|+.+|+|+-.+-|+|..+.. .+|+++|.++|
T Consensus 93 a~~~~~~al~~~P~~~~~~~~la~~~~~-~g~~~~A~~~~ 131 (176)
T 2r5s_A 93 ELKRLEQELAANPDNFELACELAVQYNQ-VGRDEEALELL 131 (176)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 4677888888888888888888887654 67888887776
No 73
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=92.55 E-value=0.072 Score=56.39 Aligned_cols=44 Identities=14% Similarity=0.116 Sum_probs=33.9
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|+.+|+++..+.|.|..|.+ .+|++.|+++|
T Consensus 57 g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g~~~~A~~~~ 100 (723)
T 4gyw_A 57 GKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQDVQGALQCY 100 (723)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 456677888888888888888888888877755 67788888776
No 74
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=92.55 E-value=0.14 Score=43.61 Aligned_cols=34 Identities=12% Similarity=0.143 Sum_probs=30.1
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHH
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIV 447 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V 447 (459)
.+++.+..+|+++|+.+|+|+-.+-|.+.+++..
T Consensus 102 g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 102 GQEKDALRMYEKILQLEADNLAANIFLGNYYYLT 135 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 5678899999999999999999999999887643
No 75
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=92.43 E-value=0.098 Score=44.99 Aligned_cols=46 Identities=17% Similarity=0.143 Sum_probs=40.5
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|+++++.+|+|+..+.++|..+.. .+|+++|.++|+
T Consensus 285 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~A~~~~~ 330 (359)
T 3ieg_A 285 DEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLI-EEMYDEAIQDYE 330 (359)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3467889999999999999999999999997755 899999999873
No 76
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=92.36 E-value=0.11 Score=42.84 Aligned_cols=44 Identities=14% Similarity=0.103 Sum_probs=28.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|+.+|+++..+.+.|..+.. .+|++.|.++|
T Consensus 187 ~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 230 (258)
T 3uq3_A 187 MSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYASALETL 230 (258)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 345566666777777777777666666665543 56666666665
No 77
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=92.33 E-value=0.13 Score=42.92 Aligned_cols=44 Identities=25% Similarity=0.412 Sum_probs=36.1
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++..+.++|..+.. .+|+++|++||
T Consensus 85 ~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 128 (252)
T 2ho1_A 85 MEPKLADEEYRKALASDSRNARVLNNYGGFLYE-QKRYEEAYQRL 128 (252)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 467778888888988889888888888887654 78888888876
No 78
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.17 E-value=0.12 Score=43.57 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=27.7
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+++.+..+|+++|+.+|+|+..+.+.|. ++.-.+|++.|.++|
T Consensus 18 ~~~~A~~~~~~~l~~~p~~~~~~~~l~~-~~~~~~~~~~A~~~~ 60 (272)
T 3u4t_A 18 NYAEAIEVFNKLEAKKYNSPYIYNRRAV-CYYELAKYDLAQKDI 60 (272)
T ss_dssp CHHHHHHHHHHHHHTTCCCSTTHHHHHH-HHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHH-HHHHHhhHHHHHHHH
Confidence 4566666677777777776666666666 344466666666665
No 79
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=92.14 E-value=0.1 Score=48.50 Aligned_cols=44 Identities=9% Similarity=0.038 Sum_probs=35.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|+.+|+|+..+-|.|+.++. .+|++.|.++|
T Consensus 210 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~ 253 (336)
T 1p5q_A 210 QAFSAAIESCNKALELDSNNEKGLSRRGEAHLA-VNDFELARADF 253 (336)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 456778888888888888888888888887655 67888888776
No 80
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.14 E-value=0.12 Score=46.19 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=39.9
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHh----------hhHHHhhcccC
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVA----------HDYDRYLNFLS 459 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~----------~D~drAEeYyk 459 (459)
.++.+...|+++|+.||+++-.+-|-+.-++... +|+++|.+||+
T Consensus 61 ~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~ 115 (158)
T 1zu2_A 61 MIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQ 115 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHH
Confidence 4778999999999999999999999998887653 79999999984
No 81
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=92.08 E-value=0.11 Score=46.25 Aligned_cols=42 Identities=12% Similarity=-0.058 Sum_probs=20.0
Q ss_pred hhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 416 ~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
++.+..+|+++|+.+|+++..+.|.|..+.. .+|+++|.++|
T Consensus 263 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 304 (365)
T 4eqf_A 263 SEEAVEAYTRALEIQPGFIRSRYNLGISCIN-LGAYREAVSNF 304 (365)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 4444455555555555555555554444332 34455554444
No 82
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=92.03 E-value=0.13 Score=44.09 Aligned_cols=46 Identities=11% Similarity=0.275 Sum_probs=40.5
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+++.+..+|++++..+|+|+..+.|+|..+.. .+++++|+++|+
T Consensus 172 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 217 (330)
T 3hym_B 172 TNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ-NGEWKTAEKWFL 217 (330)
T ss_dssp TTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cccHHHHHHHHH
Confidence 3467889999999999999999999999998765 899999998873
No 83
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=91.95 E-value=0.16 Score=42.16 Aligned_cols=46 Identities=15% Similarity=0.090 Sum_probs=39.5
Q ss_pred chhhhhHHHHHHHhhhcCCCCh----------------HhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDP----------------LLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~----------------LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+|..+..+|+++|..+|+++ .++.|.|..+.. .+|++.|.+||+
T Consensus 51 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~ 112 (198)
T 2fbn_A 51 KNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHAS 112 (198)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 3467889999999999999998 889999997754 789999998873
No 84
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=91.88 E-value=0.11 Score=51.34 Aligned_cols=43 Identities=7% Similarity=-0.239 Sum_probs=25.2
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+|+.+..+|+++|+.+|+++..+.|.|..+.. .+++++|+++|
T Consensus 55 ~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~eA~~~~ 97 (477)
T 1wao_1 55 CYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAALRDY 97 (477)
T ss_dssp CHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 45555666666666666666666666654433 45666666555
No 85
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=91.86 E-value=0.12 Score=44.24 Aligned_cols=46 Identities=7% Similarity=0.166 Sum_probs=40.1
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|+++++.+|+++..+.|.|..+.. .+|+++|.+||+
T Consensus 249 ~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~ 294 (330)
T 3hym_B 249 LKKYAEALDYHRQALVLIPQNASTYSAIGYIHSL-MGNFENAVDYFH 294 (330)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 3567889999999999999999999999988755 789999999873
No 86
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=91.84 E-value=0.064 Score=39.43 Aligned_cols=46 Identities=13% Similarity=0.256 Sum_probs=39.4
Q ss_pred chhhhhHHHHHHHhhhcCCCC-------hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPND-------PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N-------~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+++.+..+|++++..+|++ +..+.|.|..++. .+|++.|.++|+
T Consensus 51 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~ 103 (131)
T 1elr_A 51 KGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYN 103 (131)
T ss_dssp HTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 356788999999999999988 8889999988765 789999999873
No 87
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=91.77 E-value=0.13 Score=45.89 Aligned_cols=44 Identities=16% Similarity=0.021 Sum_probs=28.7
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+|+..+.|.|..+.. .+|+++|.++|
T Consensus 113 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 156 (365)
T 4eqf_A 113 ENEQAAIVALQRCLELQPNNLKALMALAVSYTN-TSHQQDACEAL 156 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHc-cccHHHHHHHH
Confidence 345666667777777777777777776665533 56677776665
No 88
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.66 E-value=0.14 Score=42.90 Aligned_cols=45 Identities=9% Similarity=0.048 Sum_probs=36.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHh-------HhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLL-------LANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~Ll-------L~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|..+|+|+.+ +.|.++.+ .-.+|+++|+++|+
T Consensus 90 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~-~~~~~~~~A~~~~~ 141 (228)
T 4i17_A 90 KNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKF-QQAGNIEKAEENYK 141 (228)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH-HHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHH-HHhccHHHHHHHHH
Confidence 56788999999999999999955 55555544 34789999999873
No 89
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=91.50 E-value=0.17 Score=45.58 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=38.9
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|..+|+|+.++.|+|..+. -.++++.|+++|
T Consensus 18 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~ 61 (281)
T 2c2l_A 18 RKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADC 61 (281)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHH
Confidence 56788999999999999999999999998765 478999999887
No 90
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=91.48 E-value=0.16 Score=40.83 Aligned_cols=42 Identities=2% Similarity=-0.125 Sum_probs=20.0
Q ss_pred hhhHHHHHHHhhhcCC-CChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 416 YFRTELLYQTGLAQEP-NDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 416 ~~rtE~~Yk~~I~~dP-~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
++.+..+|++++..+| +++..+. .+-.++.-.++++.|..|+
T Consensus 163 ~~~A~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~ 205 (225)
T 2vq2_A 163 LGDADYYFKKYQSRVEVLQADDLL-LGWKIAKALGNAQAAYEYE 205 (225)
T ss_dssp HHHHHHHHHHHHHHHCSCCHHHHH-HHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHH-HHHHHHHhcCcHHHHHHHH
Confidence 4445555555555555 5555442 2223333445555555443
No 91
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=91.47 E-value=0.16 Score=41.87 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=40.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|..+|+++.++.|.|..+.. .+|++.|.++|+
T Consensus 153 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 197 (258)
T 3uq3_A 153 SDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCN 197 (258)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 567889999999999999999999999987755 789999998873
No 92
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=91.44 E-value=0.16 Score=41.77 Aligned_cols=44 Identities=14% Similarity=0.124 Sum_probs=29.5
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++.++.++|..+. -.+|++.|.++|
T Consensus 105 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~ 148 (243)
T 2q7f_A 105 EMYKEAKDMFEKALRAGMENGDLFYMLGTVLV-KLEQPKLALPYL 148 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH-HTSCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhccHHHHHHHH
Confidence 35566677777777777777777777776554 356777776665
No 93
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=91.38 E-value=0.14 Score=50.09 Aligned_cols=44 Identities=14% Similarity=0.033 Sum_probs=35.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|+.+|+|+..+.|+|..+.. .+|++.|.++|
T Consensus 71 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~ 114 (568)
T 2vsy_A 71 QRHAEAAVLLQQASDAAPEHPGIALWLGHALED-AGQAEAAAAAY 114 (568)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 456778888888888888888888888886644 78888888876
No 94
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=91.38 E-value=0.16 Score=43.70 Aligned_cols=44 Identities=7% Similarity=-0.140 Sum_probs=32.1
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++..+.+.|..+.. .+|++.|.++|
T Consensus 51 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~ 94 (359)
T 3ieg_A 51 GKSKAALPDLTKVIALKMDFTAARLQRGHLLLK-QGKLDEAEDDF 94 (359)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-cCChHHHHHHH
Confidence 356667777888888888888777777776544 67777777766
No 95
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=91.37 E-value=0.16 Score=41.69 Aligned_cols=45 Identities=9% Similarity=0.163 Sum_probs=40.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++..+|+++..+.++|..+.. .+|+++|.++|+
T Consensus 71 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~ 115 (243)
T 2q7f_A 71 NELERALAFYDKALELDSSAATAYYGAGNVYVV-KEMYKEAKDMFE 115 (243)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 467889999999999999999999999998765 789999998873
No 96
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=91.20 E-value=0.17 Score=42.29 Aligned_cols=44 Identities=14% Similarity=0.056 Sum_probs=34.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++..+.+.+..+. -.+|+++|.++|
T Consensus 189 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~A~~~~ 232 (252)
T 2ho1_A 189 REYVPARQYYDLFAQGGGQNARSLLLGIRLAK-VFEDRDTAASYG 232 (252)
T ss_dssp TCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH-HccCHHHHHHHH
Confidence 45677788888888888888888877777664 468888888776
No 97
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=91.15 E-value=0.15 Score=48.65 Aligned_cols=45 Identities=22% Similarity=0.150 Sum_probs=39.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|+.+|+|+..+-|+|..++. .+|+++|.++|+
T Consensus 287 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~eA~~~l~ 331 (370)
T 1ihg_A 287 SDWQGAVDSCLEALEIDPSNTKALYRRAQGWQG-LKEYDQALADLK 331 (370)
T ss_dssp TCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 467889999999999999999999999988765 689999998873
No 98
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=91.14 E-value=0.13 Score=49.95 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=40.8
Q ss_pred chhh-hhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADY-FRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~-~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+| +.+..+|+++|+.+|+|+..+.|.|..++. .+|+++|+++|+
T Consensus 115 ~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~~ 161 (474)
T 4abn_A 115 TPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWK-KGDVTSAHTCFS 161 (474)
T ss_dssp SSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3567 899999999999999999999999987765 799999999873
No 99
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=91.01 E-value=0.14 Score=54.33 Aligned_cols=45 Identities=11% Similarity=-0.004 Sum_probs=39.3
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+.++|+++|+.+|+|+..+.|.|..+.+ .+++++|+++|+
T Consensus 91 g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~-~g~~~eAi~~~~ 135 (723)
T 4gyw_A 91 QDVQGALQCYTRAIQINPAFADAHSNLASIHKD-SGNIPEAIASYR 135 (723)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 456778999999999999999999999988765 789999999884
No 100
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=90.51 E-value=0.18 Score=46.43 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=39.4
Q ss_pred chhhhhHHHHHHHhhhcCCCChH---hHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPL---LLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~L---lL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|+++|+.+|++.. ++-+|+.|+..-.+|+++|.+||+
T Consensus 347 ~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~ 396 (472)
T 4g1t_A 347 ADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFI 396 (472)
T ss_dssp TTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 35678899999999999998764 567899998888899999999873
No 101
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=90.42 E-value=0.18 Score=46.97 Aligned_cols=45 Identities=13% Similarity=-0.011 Sum_probs=39.6
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|+.+|+|+-.+-|.|+-+.. .++++.|+++|+
T Consensus 244 g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~-~g~~~~A~~~l~ 288 (338)
T 2if4_A 244 KRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAE-LGQMDSARDDFR 288 (338)
T ss_dssp TCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 467889999999999999999999999998755 789999998873
No 102
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=90.34 E-value=0.22 Score=42.53 Aligned_cols=43 Identities=19% Similarity=0.066 Sum_probs=26.6
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+++.+..+|++++..+|+++..+.|.|..+.. .+|++.|.++|
T Consensus 221 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 263 (327)
T 3cv0_A 221 RPQEALDAYNRALDINPGYVRVMYNMAVSYSN-MSQYDLAAKQL 263 (327)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hccHHHHHHHH
Confidence 45556666666666666666666666665433 56666666655
No 103
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=90.33 E-value=0.22 Score=43.75 Aligned_cols=44 Identities=9% Similarity=-0.065 Sum_probs=31.5
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+|+++..+.|.|..+.. .+|++.|.++|
T Consensus 265 g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 308 (368)
T 1fch_A 265 NQSEEAVAAYRRALELQPGYIRSRYNLGISCIN-LGAHREAVEHF 308 (368)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 456667777777777777777777777776644 67777777766
No 104
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=90.29 E-value=0.2 Score=48.28 Aligned_cols=45 Identities=24% Similarity=0.294 Sum_probs=38.0
Q ss_pred chhhhhHHHHHHHhhhcCCCCh-HhHhHHHHHHHHHhhhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPNDP-LLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~-LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
..+++++...|+++|+.+|+|+ +++-||++|+.. .+++++|.++|
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~ 379 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIF 379 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 3578889999999999999996 789999999865 57788888776
No 105
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=90.21 E-value=0.26 Score=44.78 Aligned_cols=45 Identities=13% Similarity=0.073 Sum_probs=40.5
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+..+..+|+++++.+|+|+.++.|.|..+.. .++++.|+++|+
T Consensus 180 ~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~-~g~~~eA~~~l~ 224 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKCSPTLLLLNGQAACHMA-QGRWEAAEGVLQ 224 (291)
T ss_dssp THHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 678899999999999999999999999997755 789999999873
No 106
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=90.10 E-value=0.23 Score=43.67 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=40.8
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|++++..+|+++..+.|.|..+.. .++++.|.++|+
T Consensus 230 ~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~ 275 (368)
T 1fch_A 230 SGEYDKAVDCFTAALSVRPNDYLLWNKLGATLAN-GNQSEEAVAAYR 275 (368)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3568889999999999999999999999998765 889999999873
No 107
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=90.06 E-value=0.17 Score=49.26 Aligned_cols=44 Identities=16% Similarity=0.082 Sum_probs=34.7
Q ss_pred hhhhhHHHHHHHhhhcCC---CChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEP---NDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP---~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++..+| +|+..+.|+|..++. .+|+++|.++|
T Consensus 235 g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~ 281 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKY-EESYGEALEGF 281 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 667788888888888888 888888888877654 67888888776
No 108
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=90.02 E-value=0.22 Score=49.08 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=34.4
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHH-HHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFL-YIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL-~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++++.+|+++..+.|++... +.-++++++|.++|+
T Consensus 88 g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 88 GKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4678899999999999999999999988862 344789999998874
No 109
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=89.96 E-value=0.12 Score=49.96 Aligned_cols=44 Identities=14% Similarity=0.185 Sum_probs=37.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++++..+|+++|+.+|+|+-++-||++|+.. .+|+++|..+|
T Consensus 405 ~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~-~g~~~~Ar~~~ 448 (530)
T 2ooe_A 405 KDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH-LNEDNNTRVLF 448 (530)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT-TTCHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHh-CCCHhhHHHHH
Confidence 456788889999999999999999999999865 68888888776
No 110
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=89.90 E-value=0.21 Score=48.71 Aligned_cols=46 Identities=11% Similarity=0.122 Sum_probs=38.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHh--hhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVA--HDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~--~D~drAEeYyk 459 (459)
.+++.+..+|+++++.+|+|+..+.|+|..+.... +|+++|.++|+
T Consensus 105 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~ 152 (568)
T 2vsy_A 105 GQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVR 152 (568)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 45777889999999999999999999998887643 88999988873
No 111
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=89.71 E-value=0.27 Score=40.27 Aligned_cols=46 Identities=15% Similarity=0.056 Sum_probs=39.0
Q ss_pred chhhhhHHHHHHHhhhcCCCCh----------------HhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDP----------------LLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~----------------LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+++.+..+|++++..+|+|+ ..+-|.|..++. .+|+++|.++|+
T Consensus 84 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~ 145 (213)
T 1hh8_A 84 TEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLA 145 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 3467889999999999999888 888899987755 789999999873
No 112
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=89.69 E-value=0.21 Score=46.36 Aligned_cols=44 Identities=14% Similarity=0.042 Sum_probs=33.5
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|+.+|+|+..+-+.|..+.. .++++.|.++|
T Consensus 73 g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~ 116 (537)
T 3fp2_A 73 GDLEKVIEFTTKALEIKPDHSKALLRRASANES-LGNFTDAMFDL 116 (537)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 456777888888888888888888888876644 67788887766
No 113
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=89.58 E-value=0.27 Score=44.30 Aligned_cols=43 Identities=19% Similarity=0.156 Sum_probs=24.0
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+++.+..+|+++++.+|+|+..+.|.+..+. -.+|+++|.++|
T Consensus 286 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~ 328 (388)
T 1w3b_A 286 SVAEAEDCYNTALRLCPTHADSLNNLANIKR-EQGNIEEAVRLY 328 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-HcCCHHHHHHHH
Confidence 3445555666666666666665555555443 355566665554
No 114
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=89.51 E-value=0.27 Score=35.91 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=25.3
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhH--hHHHHHH
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLL--ANYAQFL 444 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL--~NYAqFL 444 (459)
-.+++.+..+|+++|..+|+|+..+ .++++.+
T Consensus 48 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~ 81 (99)
T 2kc7_A 48 LGDWQKALNNYQSAIELNPDSPALQARKMVMDIL 81 (99)
T ss_dssp HTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 3568889999999999999999888 4444433
No 115
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=89.47 E-value=0.18 Score=40.46 Aligned_cols=44 Identities=20% Similarity=0.175 Sum_probs=38.1
Q ss_pred hhhhhHHHHHHHhhhc------------------CCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQ------------------EPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~------------------dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|..+..+|+++|.. +|.++.++.|.|.-+.. .+|++.|.++|
T Consensus 25 ~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~ 86 (162)
T 3rkv_A 25 KDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETS 86 (162)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHH
Confidence 4678899999999999 78888999999988755 78999999887
No 116
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=89.31 E-value=0.3 Score=47.54 Aligned_cols=45 Identities=7% Similarity=0.096 Sum_probs=38.1
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|+.+|+|+..|-|.|+-++. .+|++.|.++|+
T Consensus 331 g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~-~g~~~~A~~~~~ 375 (457)
T 1kt0_A 331 REYTKAVECCDKALGLDSANEKGLYRRGEAQLL-MNEFESAKGDFE 375 (457)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 467788999999999999999999999987765 688999988873
No 117
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=89.30 E-value=0.3 Score=41.71 Aligned_cols=46 Identities=13% Similarity=0.134 Sum_probs=41.0
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|++++..+|+++..+.+.|..+.. .++++.|.++|+
T Consensus 185 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 230 (327)
T 3cv0_A 185 SNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEALDAYN 230 (327)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3568899999999999999999999999998876 889999998873
No 118
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=89.15 E-value=0.34 Score=35.27 Aligned_cols=45 Identities=11% Similarity=0.005 Sum_probs=36.1
Q ss_pred hhhhhHHHHHHHhhhcCCCC------hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N------~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|..+|+| +..+-+.++.+.. .++++.|.+.|+
T Consensus 52 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~ 102 (111)
T 2l6j_A 52 GEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGA-VGSVQIPVVEVD 102 (111)
T ss_dssp TCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHH-HHCCCCCSSSSS
T ss_pred cCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHH-HHhHhhhHhHHH
Confidence 46788999999999999999 8888888887655 457777776653
No 119
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=89.01 E-value=0.35 Score=44.91 Aligned_cols=45 Identities=11% Similarity=0.038 Sum_probs=39.2
Q ss_pred hhhhhHHHHHHHhhhcCCCC---------------hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPND---------------PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N---------------~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|..+|++ +.++.|+|..+.. .+++++|.++|+
T Consensus 161 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~ 220 (336)
T 1p5q_A 161 GKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCN 220 (336)
T ss_dssp TCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 46888999999999999999 5899999997655 789999999873
No 120
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=88.73 E-value=0.34 Score=43.57 Aligned_cols=42 Identities=21% Similarity=0.160 Sum_probs=34.1
Q ss_pred hhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 416 ~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+..+...|+++++.+|+|+-.+-|+|..|.. .++++.|+++|
T Consensus 201 ~~~a~~~l~~al~~~P~~~~~~~~la~~l~~-~g~~~~A~~~l 242 (287)
T 3qou_A 201 DTPEIQQLQQQVAENPEDAALATQLALQLHQ-VGRNEEALELL 242 (287)
T ss_dssp SCHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred cCccHHHHHHHHhcCCccHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 3345678899999999999999999987754 78888888776
No 121
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=88.62 E-value=0.33 Score=44.10 Aligned_cols=45 Identities=16% Similarity=0.152 Sum_probs=39.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++..+|+|+..+.+.|..+. -.+|++.|.++|+
T Consensus 309 g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~ 353 (450)
T 2y4t_A 309 EKPVEAIRVCSEVLQMEPDNVNALKDRAEAYL-IEEMYDEAIQDYE 353 (450)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HhcCHHHHHHHHH
Confidence 46788999999999999999999999999875 4789999998873
No 122
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=88.61 E-value=0.3 Score=47.24 Aligned_cols=42 Identities=10% Similarity=0.118 Sum_probs=33.8
Q ss_pred hhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 416 YFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 416 ~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
++.+..+|+++|..+|+|+..+.|.+..+.. .+++++|.++|
T Consensus 148 ~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~-~g~~~eAl~~~ 189 (382)
T 2h6f_A 148 LHEEMNYITAIIEEQPKNYQVWHHRRVLVEW-LRDPSQELEFI 189 (382)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-ccCHHHHHHHH
Confidence 7778888888888888888888888876644 57888888776
No 123
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=88.29 E-value=0.4 Score=45.59 Aligned_cols=40 Identities=23% Similarity=0.417 Sum_probs=34.8
Q ss_pred hhHHHHHHHhhh-----cCCCChHhHh---HHHHHHHHHhhhHHHhhc
Q 012648 417 FRTELLYQTGLA-----QEPNDPLLLA---NYAQFLYIVAHDYDRYLN 456 (459)
Q Consensus 417 ~rtE~~Yk~~I~-----~dP~N~LlL~---NYAqFL~~V~~D~drAEe 456 (459)
+++...||.|++ ..|.||+-|+ ||+-|+|++-+|.++|-+
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~ 194 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACR 194 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 467889999884 5899999887 999999999999999854
No 124
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=88.26 E-value=0.41 Score=43.07 Aligned_cols=44 Identities=14% Similarity=0.003 Sum_probs=33.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++++.+|+++..+.|.|..+. -.+|++.|+++|
T Consensus 251 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~ 294 (388)
T 1w3b_A 251 GLIDLAIDTYRRAIELQPHFPDAYCNLANALK-EKGSVAEAEDCY 294 (388)
T ss_dssp TCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH-HHSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHH
Confidence 45666777888888888888888888877654 467888888776
No 125
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=88.22 E-value=0.29 Score=45.04 Aligned_cols=42 Identities=12% Similarity=-0.021 Sum_probs=26.6
Q ss_pred hhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 417 FRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 417 ~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
...+.+++++|..+|+|+-.+.|.+. +|...+|+++|.+||+
T Consensus 413 ~~l~~~~~~~l~~~p~~~~~~~~LG~-~~~~~g~~~~A~~~y~ 454 (472)
T 4g1t_A 413 DKLQKIAKMRLSKNGADSEALHVLAF-LQELNEKMQQADEDSE 454 (472)
T ss_dssp HHHHHHHHHHHHHCC-CTTHHHHHHH-HHHHHHHCC-------
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHH-HHHHcCCHHHHHHHHH
Confidence 34556677777888999999998886 5677999999999995
No 126
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=88.09 E-value=0.37 Score=44.71 Aligned_cols=45 Identities=11% Similarity=0.135 Sum_probs=40.8
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++++.+|+|+..+.|.|+.+.. .+|++.|.++|+
T Consensus 442 ~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~ 486 (537)
T 3fp2_A 442 EKFNAAIKLLTKACELDPRSEQAKIGLAQLKLQ-MEKIDEAIELFE 486 (537)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 778899999999999999999999999998755 789999999873
No 127
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=88.03 E-value=0.3 Score=41.84 Aligned_cols=45 Identities=7% Similarity=0.075 Sum_probs=39.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHH-----HhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYI-----VAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~-----V~~D~drAEeYyk 459 (459)
.++..+..+|+++++. |+|+..+-|.+.++.. |.+|+++|.+||+
T Consensus 143 ~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~ 192 (212)
T 3rjv_A 143 EDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLN 192 (212)
T ss_dssp CCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 4678899999999998 8899999999998876 5669999999984
No 128
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=87.67 E-value=0.43 Score=42.91 Aligned_cols=46 Identities=11% Similarity=0.256 Sum_probs=37.2
Q ss_pred chhhhhHHHHHHHhhhcCCCChH----hHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPL----LLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~L----lL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+|+.+..+|+++|+.+|+|+. ++.+.|..++ -.+|+++|++||+
T Consensus 61 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~ 110 (411)
T 4a1s_A 61 AGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHK 110 (411)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHH
Confidence 35678899999999999999984 6667777665 4789999999873
No 129
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=87.53 E-value=0.42 Score=41.07 Aligned_cols=46 Identities=15% Similarity=0.050 Sum_probs=38.1
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhH-----------------hHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLL-----------------ANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL-----------------~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+++.+..+|+++|..+|+++... -+.|..++ -.+|++.|.++|+
T Consensus 110 ~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~ 172 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYE-RRELYEAAAVTYE 172 (261)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCHHHHHHHHH
Confidence 6788999999999999999998776 45566654 4899999998873
No 130
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=87.02 E-value=0.56 Score=40.31 Aligned_cols=45 Identities=11% Similarity=0.030 Sum_probs=36.1
Q ss_pred hhhhhHHHHHHHhhhcCCCC---hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPND---PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N---~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|..+|++ +..+-+.|.-++. .+|++.|.++|+
T Consensus 29 g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~ 76 (261)
T 3qky_A 29 GKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYE 76 (261)
T ss_dssp TCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHH
Confidence 56788899999999999999 6667777776654 789999988873
No 131
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=86.82 E-value=0.57 Score=44.78 Aligned_cols=41 Identities=22% Similarity=0.445 Sum_probs=35.5
Q ss_pred hhhHHHHHHHhhh-----cCCCChHhHh---HHHHHHHHHhhhHHHhhc
Q 012648 416 YFRTELLYQTGLA-----QEPNDPLLLA---NYAQFLYIVAHDYDRYLN 456 (459)
Q Consensus 416 ~~rtE~~Yk~~I~-----~dP~N~LlL~---NYAqFL~~V~~D~drAEe 456 (459)
-+++...||.|++ ..|.||+-|+ ||+-|+|++.+|.++|-+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~ 197 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAIS 197 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 4568889999875 5899999887 999999999999999864
No 132
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=86.62 E-value=0.35 Score=40.07 Aligned_cols=45 Identities=18% Similarity=0.185 Sum_probs=38.7
Q ss_pred hhhhhHHHHHHHhhhc--------CCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQ--------EPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~--------dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++.. +|.++..+.|.|..+.. .+|+++|.++|+
T Consensus 141 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~ 193 (283)
T 3edt_B 141 GKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYK 193 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4678899999999998 88888999999987754 799999999873
No 133
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=86.46 E-value=0.46 Score=46.25 Aligned_cols=45 Identities=11% Similarity=0.160 Sum_probs=39.2
Q ss_pred hhhhhHHHHHHHhhhcCCCC---------------hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPND---------------PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N---------------~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|..+..+|+++|..+|++ ..++.|+|..++. .++|++|.++|+
T Consensus 282 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~ 341 (457)
T 1kt0_A 282 GKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCD 341 (457)
T ss_dssp TCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 46888999999999999999 5889999988765 789999998873
No 134
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=86.41 E-value=0.65 Score=42.16 Aligned_cols=45 Identities=4% Similarity=-0.156 Sum_probs=38.8
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++++.+|+++..+.+.|..+.. .++++.|.++|+
T Consensus 74 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~ 118 (450)
T 2y4t_A 74 GKSKAALPDLTKVIQLKMDFTAARLQRGHLLLK-QGKLDEAEDDFK 118 (450)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 467788999999999999999999999988755 789999998873
No 135
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=86.17 E-value=0.21 Score=39.60 Aligned_cols=45 Identities=2% Similarity=0.066 Sum_probs=34.6
Q ss_pred hhhhhHHHHHHHhhhcCCCChHh-------HhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLL-------LANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~Ll-------L~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|+.+|+++-. +.|-+.. +.-.+|++.|.+||+
T Consensus 56 ~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~-~~~~~~~~~A~~~~~ 107 (127)
T 4gcn_A 56 KKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNA-FQKQNDLSLAVQWFH 107 (127)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-HHHTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHH-HHHcCCHHHHHHHHH
Confidence 46788999999999999988654 3444443 355899999999883
No 136
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=86.06 E-value=0.77 Score=38.60 Aligned_cols=45 Identities=13% Similarity=0.256 Sum_probs=36.2
Q ss_pred chhhhhHHHHHHHhhhcCCCCh----HhHhHHHHHHHHHhhhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPNDP----LLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~----LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
..+++.+..+|++++..+|+|+ .++.+.|..+ ...+|+++|.+||
T Consensus 18 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~ 66 (338)
T 3ro2_A 18 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAY-FYLHDYAKALEYH 66 (338)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH-HHTTCHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHH-HHcCCHHHHHHHH
Confidence 3567889999999999999996 4555777765 4578999999886
No 137
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=85.95 E-value=0.42 Score=49.09 Aligned_cols=44 Identities=14% Similarity=-0.028 Sum_probs=33.4
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|+.+|+|+..+-|+|..++. .+|+++|+++|
T Consensus 447 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~g~~~~A~~~~ 490 (681)
T 2pzi_A 447 GDVAKATRKLDDLAERVGWRWRLVWYRAVAELL-TGDYDSATKHF 490 (681)
T ss_dssp TCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 456777888888888888888888888876654 67888887776
No 138
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=85.95 E-value=0.64 Score=45.02 Aligned_cols=41 Identities=20% Similarity=0.352 Sum_probs=35.1
Q ss_pred hhhHHHHHHHhhh----cCCCChHhHh---HHHHHHHHHhhhHHHhhc
Q 012648 416 YFRTELLYQTGLA----QEPNDPLLLA---NYAQFLYIVAHDYDRYLN 456 (459)
Q Consensus 416 ~~rtE~~Yk~~I~----~dP~N~LlL~---NYAqFL~~V~~D~drAEe 456 (459)
-+++...||.|++ ..|.||+-|+ ||+-|+|++-+|.++|-+
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~ 219 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAID 219 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3467888999885 6899999887 999999999999999854
No 139
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=85.82 E-value=0.24 Score=47.33 Aligned_cols=45 Identities=11% Similarity=0.030 Sum_probs=39.1
Q ss_pred hhhhhHHHHHHHhhh----------------cCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLA----------------QEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~----------------~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|..+..+|+++|+ .+|.++.++.|+|..++. .+++++|.+||+
T Consensus 237 g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~ 297 (370)
T 1ihg_A 237 QNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCL 297 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHH
Confidence 467788999999998 899999999999998764 789999999873
No 140
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=85.77 E-value=0.66 Score=44.89 Aligned_cols=41 Identities=27% Similarity=0.404 Sum_probs=35.1
Q ss_pred hhhHHHHHHHhhh-----cCCCChHhHh---HHHHHHHHHhhhHHHhhc
Q 012648 416 YFRTELLYQTGLA-----QEPNDPLLLA---NYAQFLYIVAHDYDRYLN 456 (459)
Q Consensus 416 ~~rtE~~Yk~~I~-----~dP~N~LlL~---NYAqFL~~V~~D~drAEe 456 (459)
-+++...||.|++ ..|.||+-|+ ||+-|+|++.+|.++|-+
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~ 199 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACN 199 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 3467889999884 5899999887 999999999999999854
No 141
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=85.54 E-value=0.69 Score=44.56 Aligned_cols=40 Identities=23% Similarity=0.433 Sum_probs=34.5
Q ss_pred hhHHHHHHHhhh-----cCCCChHhHh---HHHHHHHHHhhhHHHhhc
Q 012648 417 FRTELLYQTGLA-----QEPNDPLLLA---NYAQFLYIVAHDYDRYLN 456 (459)
Q Consensus 417 ~rtE~~Yk~~I~-----~dP~N~LlL~---NYAqFL~~V~~D~drAEe 456 (459)
+++...||.|++ ..|.||+-|+ ||+-|+|++.++.++|-+
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~ 195 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACH 195 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 467789999875 5899999887 999999999999999854
No 142
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=85.50 E-value=0.64 Score=42.60 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=40.9
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|++++..+|+++..+.+.|+.+. -.+|+++|.++|+
T Consensus 428 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~ 473 (514)
T 2gw1_A 428 VENFIEATNLLEKASKLDPRSEQAKIGLAQMKL-QQEDIDEAITLFE 473 (514)
T ss_dssp TTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HhcCHHHHHHHHH
Confidence 567889999999999999999999999999775 5899999999873
No 143
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=85.44 E-value=0.27 Score=40.70 Aligned_cols=46 Identities=17% Similarity=0.158 Sum_probs=38.5
Q ss_pred chhhhhHHHHHHHhhhc--------CCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQ--------EPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~--------dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|++++.. +|.++..+.|.|..++ -.+++++|++||+
T Consensus 98 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~ 151 (283)
T 3edt_B 98 RGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ-NQGKAEEVEYYYR 151 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Confidence 35678899999999988 6788888999998765 4799999999873
No 144
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=85.31 E-value=0.6 Score=44.25 Aligned_cols=46 Identities=15% Similarity=0.010 Sum_probs=40.3
Q ss_pred chhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|+++++.+|+|+..+.+.+..+. -.+++++|.++|+
T Consensus 529 ~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~ 574 (597)
T 2xpi_A 529 LKMYDAAIDALNQGLLLSTNDANVHTAIALVYL-HKKIPGLAITHLH 574 (597)
T ss_dssp TTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhCCHHHHHHHHH
Confidence 356788999999999999999999999998765 5899999999873
No 145
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=85.16 E-value=0.34 Score=41.48 Aligned_cols=46 Identities=9% Similarity=-0.062 Sum_probs=39.8
Q ss_pred hhhhhHHHHHHHhhhcCC--CChHhHhHHHHHHHH---HhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEP--NDPLLLANYAQFLYI---VAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP--~N~LlL~NYAqFL~~---V~~D~drAEeYyk 459 (459)
.++.++..+|+++++.+| +++..+-|.+.++.. |.+|+++|.+||+
T Consensus 103 ~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~ 153 (212)
T 3rjv_A 103 TDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFK 153 (212)
T ss_dssp CCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 467889999999999999 568999999998877 5789999999884
No 146
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=84.68 E-value=0.4 Score=42.82 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=37.6
Q ss_pred hhhhhHHHHHHHhhhcCCCC------hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N------~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|+..|++ +..+.|.|.++.. .+++++|.+||+
T Consensus 132 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 182 (292)
T 1qqe_A 132 HDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL-DGQYIEASDIYS 182 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 56889999999999998865 4578899988865 789999998873
No 147
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=84.65 E-value=1.1 Score=31.39 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=29.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHH
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYI 446 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~ 446 (459)
.+++.+..+|+++++.+|+|+..+.|+++.+..
T Consensus 57 ~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 57 GDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 467889999999999999999999999987754
No 148
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=84.31 E-value=0.53 Score=44.92 Aligned_cols=41 Identities=17% Similarity=0.144 Sum_probs=35.5
Q ss_pred hhhHHHHHHHhhh-----cCCCChHhHh---HHHHHHHHHhhhHHHhhc
Q 012648 416 YFRTELLYQTGLA-----QEPNDPLLLA---NYAQFLYIVAHDYDRYLN 456 (459)
Q Consensus 416 ~~rtE~~Yk~~I~-----~dP~N~LlL~---NYAqFL~~V~~D~drAEe 456 (459)
-+++...||.|.+ ..|.||+-|+ ||+-|+|++.+|.++|-+
T Consensus 141 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~ 189 (227)
T 2o8p_A 141 LEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFN 189 (227)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 6678899999985 4789998776 999999999999999865
No 149
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=84.09 E-value=0.69 Score=44.74 Aligned_cols=43 Identities=12% Similarity=0.032 Sum_probs=30.2
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+++.+..+|+++|+.||+|+..+.|-+..|.. .++++.|.+||
T Consensus 181 ~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~-~g~~~eAl~~~ 223 (382)
T 2h6f_A 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQE-FKLWDNELQYV 223 (382)
T ss_dssp CCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTHHHHH
T ss_pred CHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH-cCChHHHHHHH
Confidence 35567777777777788777777776665544 56777777776
No 150
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=83.94 E-value=0.33 Score=45.23 Aligned_cols=46 Identities=7% Similarity=0.039 Sum_probs=13.4
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|+.+|+|+..+.|+++.....+++.++|..+|+
T Consensus 278 g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~ 323 (338)
T 2if4_A 278 GQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYK 323 (338)
T ss_dssp TCHHHHHHHHHHTTC-------------------------------
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999998888888888888774
No 151
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=83.89 E-value=0.79 Score=43.46 Aligned_cols=44 Identities=20% Similarity=0.277 Sum_probs=32.7
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
..++.+..+|++|++.+|+|+..+.+.+..+.. .+++++|+++|
T Consensus 455 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~ 498 (597)
T 2xpi_A 455 GNILLANEYLQSSYALFQYDPLLLNELGVVAFN-KSDMQTAINHF 498 (597)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hCCHHHHHHHH
Confidence 356677778888888888888877777776654 67788887776
No 152
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=83.82 E-value=0.91 Score=44.14 Aligned_cols=40 Identities=23% Similarity=0.417 Sum_probs=34.4
Q ss_pred hhHHHHHHHhhh-----cCCCChHhHh---HHHHHHHHHhhhHHHhhc
Q 012648 417 FRTELLYQTGLA-----QEPNDPLLLA---NYAQFLYIVAHDYDRYLN 456 (459)
Q Consensus 417 ~rtE~~Yk~~I~-----~dP~N~LlL~---NYAqFL~~V~~D~drAEe 456 (459)
+++...||.|++ ..|.||+-|+ ||+-|+|++.+|.++|-+
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~ 220 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACR 220 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 457789999864 5899999887 999999999999999854
No 153
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=83.78 E-value=0.69 Score=39.72 Aligned_cols=43 Identities=9% Similarity=0.157 Sum_probs=29.4
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHH---HhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYI---VAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~---V~~D~drAEeYy 458 (459)
.+++.+..+|+++++.+ ++..+.|.|..+.. +.+|+++|.+||
T Consensus 56 ~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~ 101 (273)
T 1ouv_A 56 KNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYY 101 (273)
T ss_dssp CCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHH
Confidence 45666777777777764 67777777776654 367777777776
No 154
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=83.75 E-value=1 Score=39.80 Aligned_cols=45 Identities=18% Similarity=0.168 Sum_probs=36.9
Q ss_pred hhhhhHHHHHHHhh---hcCCCCh----HhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGL---AQEPNDP----LLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I---~~dP~N~----LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|++++ ...|+++ .++-|.|..+. -.+|+++|.+||+
T Consensus 169 ~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~-~~~~y~~Al~~~~ 220 (293)
T 2qfc_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY-LDSRYEESLYQVN 220 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHH-HHhhHHHHHHHHH
Confidence 56888999999999 7788765 57788888664 5899999999973
No 155
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=83.27 E-value=0.88 Score=41.65 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=39.0
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|+.+|+|+-.+-+.|+.+.. .++++.|.++|
T Consensus 53 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~ 96 (514)
T 2gw1_A 53 GDLKKVVEMSTKALELKPDYSKVLLRRASANEG-LGKFADAMFDL 96 (514)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccChHHHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 568889999999999999999999999988755 78999998876
No 156
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=83.07 E-value=0.79 Score=37.27 Aligned_cols=42 Identities=14% Similarity=0.084 Sum_probs=30.5
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHH---HhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYI---VAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~---V~~D~drAEeYy 458 (459)
++.++..+|+++.+. +|+.-.-|.+..+.. |.+|+++|.+||
T Consensus 76 d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~ 120 (138)
T 1klx_A 76 DLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTF 120 (138)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHH
Confidence 566777777777765 677777777777665 577788877776
No 157
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=82.85 E-value=0.44 Score=48.88 Aligned_cols=43 Identities=19% Similarity=0.148 Sum_probs=24.9
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|+.+|+|+..+.|.|..+.. .+|++. +++|
T Consensus 481 g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~-~g~~~~-~~~~ 523 (681)
T 2pzi_A 481 GDYDSATKHFTEVLDTFPGELAPKLALAATAEL-AGNTDE-HKFY 523 (681)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-HTCCCT-TCHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCChHH-HHHH
Confidence 445566666666666666666666666665433 455555 5444
No 158
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=82.29 E-value=0.55 Score=39.72 Aligned_cols=45 Identities=20% Similarity=0.258 Sum_probs=38.2
Q ss_pred hhhhhHHHHHHHhhhc--------CCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQ--------EPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~--------dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++.. +|.++..+.|.|..+.. .+++++|+++|+
T Consensus 167 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~ 219 (311)
T 3nf1_A 167 GKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYK 219 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 4578899999999998 78888889999987755 799999999873
No 159
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=81.72 E-value=0.9 Score=39.01 Aligned_cols=42 Identities=10% Similarity=0.049 Sum_probs=19.3
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHH---HhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYI---VAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~---V~~D~drAEeYy 458 (459)
+++.+..+|+++++.+ ++..+.|++..+.. +.+|+++|.+||
T Consensus 129 ~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~ 173 (273)
T 1ouv_A 129 DFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASY 173 (273)
T ss_dssp CHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHH
Confidence 3444445555555443 34444444444433 244555555444
No 160
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=81.56 E-value=1.4 Score=38.72 Aligned_cols=44 Identities=14% Similarity=0.307 Sum_probs=34.1
Q ss_pred hhhhhHHHHHHHhhhcCCCCh----HhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDP----LLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~----LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|..+|+|+ .++.+.|..++ ..+|+++|.+||
T Consensus 23 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~ 70 (406)
T 3sf4_A 23 GDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYH 70 (406)
T ss_dssp TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHH
Confidence 467788899999999999986 45566676554 578999998876
No 161
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=81.37 E-value=0.78 Score=34.32 Aligned_cols=45 Identities=9% Similarity=0.180 Sum_probs=31.6
Q ss_pred chhhhhHHHHHHHhhhcCCCC------hHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N------~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
-.+++.+..+|++++...+.. +..+.|.|..+. -.+|+++|.+||
T Consensus 62 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~ 112 (164)
T 3ro3_A 62 LGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYH 112 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-HHhhHHHHHHHH
Confidence 346778888888888765543 456667776554 478888888876
No 162
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=81.36 E-value=1.2 Score=44.53 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=39.9
Q ss_pred ccchhhhhHHHHHHHhhh-----cCCCChHhHhHHHH--HHHHHhhhHHHhhcccC
Q 012648 411 DDYADYFRTELLYQTGLA-----QEPNDPLLLANYAQ--FLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 411 dd~~~~~rtE~~Yk~~I~-----~dP~N~LlL~NYAq--FL~~V~~D~drAEeYyk 459 (459)
.++.+|+.++.+|+++|+ ..|+||.++.-|.. -+|.-+++|++|++||+
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 364 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQ 364 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 467789999999999998 47999988765543 35667899999999984
No 163
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=81.27 E-value=1.2 Score=37.91 Aligned_cols=44 Identities=7% Similarity=-0.029 Sum_probs=30.8
Q ss_pred hhhhhHHHHHHHhhhcCCCChH---hHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPNDPL---LLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~L---lL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+|+.+..+|+++|..+|+++. .+-+-|..+ .-.+|+++|.++|
T Consensus 18 g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~-~~~~~~~~A~~~~ 64 (225)
T 2yhc_A 18 GNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAY-YKNADLPLAQAAI 64 (225)
T ss_dssp TCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH-HHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH-HhcCCHHHHHHHH
Confidence 5677788888888888887763 455555444 4477888887776
No 164
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=81.19 E-value=1.8 Score=33.66 Aligned_cols=35 Identities=29% Similarity=0.326 Sum_probs=29.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHh
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVA 448 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~ 448 (459)
.+++.+-.+|++++..+|+|+-.+.|++.|-...+
T Consensus 60 g~~~~A~~~~~~al~l~P~~~~~~~n~~~~~~~~~ 94 (104)
T 2v5f_A 60 GDLDKALLLTKKLLELDPEHQRANGNLKYFEYIMA 94 (104)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCCHHHHhhHHHHHHHHH
Confidence 45788999999999999999999999985544433
No 165
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=81.09 E-value=0.84 Score=44.54 Aligned_cols=40 Identities=28% Similarity=0.438 Sum_probs=34.1
Q ss_pred hhHHHHHHHhhh-----c--CCCChHhHh---HHHHHHHHHhhhHHHhhc
Q 012648 417 FRTELLYQTGLA-----Q--EPNDPLLLA---NYAQFLYIVAHDYDRYLN 456 (459)
Q Consensus 417 ~rtE~~Yk~~I~-----~--dP~N~LlL~---NYAqFL~~V~~D~drAEe 456 (459)
+++...||.|++ . .|.||+-|+ ||+-|+|++.+|.++|-+
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~ 218 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMK 218 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 457788998874 3 799999887 999999999999999854
No 166
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=80.92 E-value=0.6 Score=41.34 Aligned_cols=45 Identities=22% Similarity=0.200 Sum_probs=35.2
Q ss_pred hhhhhHHHHHHHhhh-------cCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLA-------QEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~-------~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..||+++|. ..|..+.++.|+|..++. .+||++|.+||+
T Consensus 169 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~ 220 (293)
T 3u3w_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVN 220 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 368899999999994 333445577899987765 899999999873
No 167
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=80.65 E-value=1.2 Score=44.51 Aligned_cols=43 Identities=9% Similarity=-0.001 Sum_probs=37.4
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
...|+...|+++|...|.++-+.-+||+|+.. .+|.++|-+.|
T Consensus 194 ~~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~-~~~~~~ar~i~ 236 (493)
T 2uy1_A 194 HESRMHFIHNYILDSFYYAEEVYFFYSEYLIG-IGQKEKAKKVV 236 (493)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 35678899999999999999999999999954 78999987765
No 168
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=80.20 E-value=1.2 Score=39.63 Aligned_cols=48 Identities=10% Similarity=0.065 Sum_probs=38.9
Q ss_pred ccchhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhh---------hHHHhhccc
Q 012648 411 DDYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAH---------DYDRYLNFL 458 (459)
Q Consensus 411 dd~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~---------D~drAEeYy 458 (459)
+....|+.+-..|+++|+.+|+|+-.+-|++.-|.+..+ .++.|..+|
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~l 69 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKF 69 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHH
Confidence 344567788899999999999999999999997776543 367887776
No 169
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=79.33 E-value=0.8 Score=36.70 Aligned_cols=46 Identities=9% Similarity=0.040 Sum_probs=37.5
Q ss_pred chhhhhHHHHHHHhhh------cCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLA------QEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~------~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|++++. ..|..+..+.|.|..+. ..+|+++|++||+
T Consensus 39 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~ 90 (203)
T 3gw4_A 39 MDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNWDAARRCFL 90 (203)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Confidence 3567889999999999 66777888888887664 5899999999873
No 170
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=79.28 E-value=0.87 Score=40.97 Aligned_cols=44 Identities=23% Similarity=0.264 Sum_probs=23.3
Q ss_pred hhhhhHHHHHHHhhhcCCCC------hHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N------~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|+++|+..|.+ +..+.|.|.++.. .++|++|.+||
T Consensus 129 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~ 178 (307)
T 2ifu_A 129 LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR-QQKFDEAAASL 178 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 44555566666666555432 3445555555433 45556555554
No 171
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=78.44 E-value=1.8 Score=36.81 Aligned_cols=46 Identities=11% Similarity=-0.011 Sum_probs=35.1
Q ss_pred cchhhhhHHHHHHHhhhcCCCChHhH-----------------hHHHHHHHHHhhhHHHhhccc
Q 012648 412 DYADYFRTELLYQTGLAQEPNDPLLL-----------------ANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 412 d~~~~~rtE~~Yk~~I~~dP~N~LlL-----------------~NYAqFL~~V~~D~drAEeYy 458 (459)
+-..++.+..+|+++|..+|+++... -+.|++++. +++++.|.++|
T Consensus 108 ~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~ 170 (225)
T 2yhc_A 108 DPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTE-RGAWVAVVNRV 170 (225)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHH
Confidence 34678899999999999999998654 234555444 78899888776
No 172
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=77.41 E-value=0.99 Score=38.18 Aligned_cols=45 Identities=20% Similarity=0.231 Sum_probs=37.5
Q ss_pred hhhhhHHHHHHHhhh--------cCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLA--------QEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~--------~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++. .+|.++..+.+.|..++. .+|+++|++||+
T Consensus 41 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~ 93 (311)
T 3nf1_A 41 GRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLN 93 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 457788999999999 478888889999987654 899999999873
No 173
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=76.32 E-value=0.81 Score=34.22 Aligned_cols=45 Identities=4% Similarity=0.095 Sum_probs=34.2
Q ss_pred hhhhhHHHHHHHhhhcCCCCh------HhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDP------LLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~------LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++++..|... ..+.|.|..++ ..+|+++|.+||+
T Consensus 23 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~ 73 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYI-FLGEFETASEYYK 73 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Confidence 467889999999999866433 36667776664 5899999999873
No 174
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=76.11 E-value=1.8 Score=35.13 Aligned_cols=43 Identities=12% Similarity=-0.002 Sum_probs=37.0
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHH---HhhhHHHhhcccC
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYI---VAHDYDRYLNFLS 459 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~---V~~D~drAEeYyk 459 (459)
+..++..+|+++.+. +|+.-.-|.+.++.. |.+|+++|.+||+
T Consensus 40 ~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~ 85 (138)
T 1klx_A 40 NKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYS 85 (138)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHH
Confidence 344499999999987 899999999998877 6899999999984
No 175
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=75.87 E-value=1.5 Score=39.92 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=39.7
Q ss_pred chhhhhHHHHHHHhhh-----cC-CCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLA-----QE-PNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~-----~d-P~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+++.+..+|+++++ .+ |+.+..+.|.|..+.. .++++.|.+||+
T Consensus 237 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~ 288 (383)
T 3ulq_A 237 QSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYK-LGKIDKAHEYHS 288 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 3578899999999999 67 9999999999987755 789999999873
No 176
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=75.23 E-value=1.4 Score=42.56 Aligned_cols=43 Identities=23% Similarity=0.330 Sum_probs=32.9
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHH--HHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLY--IVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~--~V~~D~drAEeYyk 459 (459)
.++..+..+|++++ |+|+..+-|.+.+++ ...+|+++|.+||+
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~ 275 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLD 275 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHH
Confidence 35667888888877 888888888888765 55788888887763
No 177
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=73.72 E-value=1.6 Score=39.86 Aligned_cols=46 Identities=15% Similarity=0.063 Sum_probs=40.0
Q ss_pred chhhhhHHHHHHHhhh-----cCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLA-----QEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~-----~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+++.+..+|+++++ .+|.++..+.|.|..++. .+|+++|.+||+
T Consensus 235 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~ 285 (378)
T 3q15_A 235 SGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK-AGQTQKAFQFIE 285 (378)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 3578899999999999 899999999999987755 899999999873
No 178
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=72.26 E-value=3.4 Score=36.84 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=34.8
Q ss_pred hhhhhHHHHHHHhhhcCCCChHh-------HhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLL-------LANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~Ll-------L~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|++++..+|+++.. +-|.+. ++.-.+|++.|.+||+
T Consensus 172 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~-~~~~~g~~~~A~~~~~ 223 (292)
T 1qqe_A 172 GQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGL-CQLAATDAVAAARTLQ 223 (292)
T ss_dssp TCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHH-HHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHH-HHHHcCCHHHHHHHHH
Confidence 46788999999999999998763 334443 4556799999999873
No 179
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=71.93 E-value=1.3 Score=39.12 Aligned_cols=46 Identities=7% Similarity=-0.055 Sum_probs=37.8
Q ss_pred hhhhhHHHHHHHhhhcCCCC------hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N------~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..||+++|+..+.+ +.++-|.|.-.+....++++|.+||+
T Consensus 210 ~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~ 261 (293)
T 3u3w_A 210 SRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYK 261 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHH
Confidence 57889999999999987655 67888888887776668899999884
No 180
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=71.78 E-value=2.2 Score=34.14 Aligned_cols=46 Identities=9% Similarity=-0.070 Sum_probs=34.5
Q ss_pred chhhhhHHHHHHHhhhc---CCCC----hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQ---EPND----PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~---dP~N----~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|++++.. .|++ +..+.|.|..+.. .+|+++|++||+
T Consensus 79 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~ 131 (203)
T 3gw4_A 79 AGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALH-FGDLAGARQEYE 131 (203)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH-hCCHHHHHHHHH
Confidence 35678899999999998 5544 4456777766544 899999999873
No 181
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=71.51 E-value=4.2 Score=35.89 Aligned_cols=45 Identities=13% Similarity=0.067 Sum_probs=34.2
Q ss_pred hhhhhHHHHHHHhhhcCCCC------hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N------~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|++++...+.+ ...+.|.|..++ -.+|+++|.+||+
T Consensus 129 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~ 179 (293)
T 2qfc_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFE 179 (293)
T ss_dssp SCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHH
Confidence 36788999999999876544 346666666554 4899999999983
No 182
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=70.86 E-value=3.4 Score=40.86 Aligned_cols=47 Identities=9% Similarity=-0.100 Sum_probs=38.3
Q ss_pred chhhhhHHHHHHHhhhc-----CCCChHhHhHHHHH--HHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQ-----EPNDPLLLANYAQF--LYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~-----dP~N~LlL~NYAqF--L~~V~~D~drAEeYyk 459 (459)
...|+.++.+|+++++. .|+||.++.-|.+. +|.-.++|++|++||+
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~ 353 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGT 353 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 34788999999999974 79999988777664 4666899999999984
No 183
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=69.44 E-value=3.5 Score=31.99 Aligned_cols=46 Identities=28% Similarity=0.348 Sum_probs=36.9
Q ss_pred chhhhhHHHHHHHhhhcC-------CCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQE-------PNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~d-------P~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+|.++...|++|+... +.++.++-|+|.=++. .+|+++|.+||+
T Consensus 18 ~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~ 70 (104)
T 2v5f_A 18 EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTK 70 (104)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 357899999999999863 4567888888887766 679999998873
No 184
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=68.32 E-value=3.3 Score=36.80 Aligned_cols=45 Identities=9% Similarity=-0.116 Sum_probs=38.3
Q ss_pred hhhhhHHHHHHHhhhc-------CCCChHhH----hHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQ-------EPNDPLLL----ANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~-------dP~N~LlL----~NYAqFL~~V~~D~drAEeYyk 459 (459)
..|+.+...|.++|+. +|+++-.+ -|=+.-|.. -++++.|.++|+
T Consensus 71 gr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~-lgr~eEAl~~y~ 126 (159)
T 2hr2_A 71 RSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDG-LGRGAEAMPEFK 126 (159)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHH-CCCHHHHHHHHH
Confidence 4577788899999999 99999999 999987755 688999998873
No 185
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=68.18 E-value=2 Score=36.03 Aligned_cols=44 Identities=9% Similarity=0.194 Sum_probs=27.0
Q ss_pred hhhhhHHHHHHHhhhcCCCC------hHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N------~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++...|.+ +..+.+.|..+ .-.+|+++|.+||
T Consensus 237 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~ 286 (338)
T 3ro2_A 237 GEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTY-TLLQDYEKAIDYH 286 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH-HHhcCHHHHHHHH
Confidence 35566677777777665544 45555666554 3366777776665
No 186
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=68.13 E-value=2 Score=38.61 Aligned_cols=46 Identities=15% Similarity=0.111 Sum_probs=38.9
Q ss_pred chhhhhHHHHHHHhhhc------CCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQ------EPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~------dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
..+++.+..+|+++++. +|.++..+.|.|..++ ..+++++|.+||+
T Consensus 99 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~ 150 (411)
T 4a1s_A 99 LGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCE 150 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHH
Confidence 35788899999999998 7888889999998765 5889999999873
No 187
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=67.76 E-value=2.6 Score=37.79 Aligned_cols=45 Identities=13% Similarity=-0.033 Sum_probs=35.3
Q ss_pred chhhhhHHHHHHHhhhcC--------CCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQE--------PNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~d--------P~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
-.+++.+..+|++++... |.....+.|.|..++. .+|+++|+++|
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~ 158 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASA 158 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHH
Confidence 356788999999999875 4456677788877654 79999999887
No 188
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=67.66 E-value=3.2 Score=39.50 Aligned_cols=42 Identities=12% Similarity=0.115 Sum_probs=24.4
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHH---HhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYI---VAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~---V~~D~drAEeYy 458 (459)
+++.+..+|+++++. +|+..+-|++.++.. |.+|+++|.+||
T Consensus 346 ~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~ 390 (490)
T 2xm6_A 346 EHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWM 390 (490)
T ss_dssp HHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHH
Confidence 455566666666654 456666666665554 355666666555
No 189
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=67.50 E-value=2.6 Score=37.13 Aligned_cols=44 Identities=9% Similarity=0.194 Sum_probs=26.4
Q ss_pred hhhhhHHHHHHHhhhcCCCC------hHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 414 ADYFRTELLYQTGLAQEPND------PLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N------~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
.+++.+..+|++++...|.+ +..+.|.|..+ .-.+|+++|.+||
T Consensus 241 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~ 290 (406)
T 3sf4_A 241 GEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTY-TLLQDYEKAIDYH 290 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHH-HHhCcHHHHHHHH
Confidence 34566666777776665544 55555666544 3356666666665
No 190
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=67.39 E-value=3.3 Score=36.86 Aligned_cols=45 Identities=13% Similarity=0.075 Sum_probs=36.3
Q ss_pred chhhhhHHHHHHHhhhcCCCC------------hHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPND------------PLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N------------~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
-.+|..+...|+++|+.+|++ ++.+.|-+.-|.. -++|+.|.++|
T Consensus 24 ~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~ 80 (159)
T 2hr2_A 24 AGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSA 80 (159)
T ss_dssp HTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHH
Confidence 456888999999999999993 3488888877766 47888888876
No 191
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=64.71 E-value=2.7 Score=44.50 Aligned_cols=51 Identities=18% Similarity=0.185 Sum_probs=41.7
Q ss_pred cCcccchhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 408 IEADDYADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 408 lE~dd~~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
||-....+++++-..|+++|...|+++.++-.|++|+.. .+|.++|-..|+
T Consensus 478 lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~-~~~~~~AR~lfe 528 (679)
T 4e6h_A 478 IEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY-VNEESQVKSLFE 528 (679)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh-CCCHHHHHHHHH
Confidence 444334457899999999999999999999999999976 478888877763
No 192
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=63.97 E-value=5.4 Score=40.48 Aligned_cols=48 Identities=10% Similarity=0.111 Sum_probs=38.2
Q ss_pred cchhhhhHHHHHHHhhhc-----CCCChHhHhHHHHH--HHHHhhhHHHhhcccC
Q 012648 412 DYADYFRTELLYQTGLAQ-----EPNDPLLLANYAQF--LYIVAHDYDRYLNFLS 459 (459)
Q Consensus 412 d~~~~~rtE~~Yk~~I~~-----dP~N~LlL~NYAqF--L~~V~~D~drAEeYyk 459 (459)
....|+.++.+|+++|+. .|+||.++.-|... +|.-.+||++|++||+
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 375 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYAR 375 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 456789999999999975 68898876655543 5667899999999984
No 193
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=63.73 E-value=2.6 Score=38.32 Aligned_cols=45 Identities=11% Similarity=0.143 Sum_probs=35.1
Q ss_pred hhhhhHHHHHHHhhhcCCCCh------HhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDP------LLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~------LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+|+.+..+|+++|+..|.+. ..+.|.|..+ .-.+|+++|.+||+
T Consensus 198 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y-~~~g~~~~A~~~~~ 248 (383)
T 3ulq_A 198 KQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCK-NSQSQYEDAIPYFK 248 (383)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH-HHCCCHHHHHHHHH
Confidence 578899999999998866443 4667777655 55899999999973
No 194
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=61.13 E-value=5 Score=38.23 Aligned_cols=44 Identities=14% Similarity=0.218 Sum_probs=38.2
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHH---HhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYI---VAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~---V~~D~drAEeYyk 459 (459)
.++..+..+|+++++. +|+..+-|.+.+++. |.+|+++|.+||+
T Consensus 381 ~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~ 427 (490)
T 2xm6_A 381 KDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFD 427 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 4678899999999885 579999999999887 6899999999884
No 195
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=60.32 E-value=6.2 Score=40.02 Aligned_cols=47 Identities=9% Similarity=-0.076 Sum_probs=36.5
Q ss_pred cchhhhhHHHHHHHhhhc-----CCCChHhH---hHHHHHHHHHhhhHHHhhcccC
Q 012648 412 DYADYFRTELLYQTGLAQ-----EPNDPLLL---ANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 412 d~~~~~rtE~~Yk~~I~~-----dP~N~LlL---~NYAqFL~~V~~D~drAEeYyk 459 (459)
+..+|+.++.||+++|+. -|++|.++ .|-|.. |.-+++|+.|+.+|+
T Consensus 363 ~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~-~~~~G~~~eA~~~~~ 417 (490)
T 3n71_A 363 YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLT-NWHAGHIEVGHGMIC 417 (490)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HHHTTCHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-HHHCCCHHHHHHHHH
Confidence 346889999999999975 67887765 455554 456899999999884
No 196
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=58.41 E-value=3.6 Score=41.11 Aligned_cols=47 Identities=11% Similarity=-0.055 Sum_probs=36.5
Q ss_pred cchhhhhHHHHHHHhhhc-----CCCChHhH---hHHHHHHHHHhhhHHHhhcccC
Q 012648 412 DYADYFRTELLYQTGLAQ-----EPNDPLLL---ANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 412 d~~~~~rtE~~Yk~~I~~-----dP~N~LlL---~NYAqFL~~V~~D~drAEeYyk 459 (459)
+..+|+.++.||+++|+. -|++|.+. .|-|. ||.-+++|+.|+.+|+
T Consensus 352 ~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~-~~~~qg~~~eA~~~~~ 406 (433)
T 3qww_A 352 YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR-LYMGLENKAAGEKALK 406 (433)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH-HHHHTTCHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH-HHHhccCHHHHHHHHH
Confidence 457889999999999965 57777664 45554 5667999999999884
No 197
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=58.00 E-value=3.3 Score=37.85 Aligned_cols=48 Identities=21% Similarity=0.172 Sum_probs=40.1
Q ss_pred ccchhhhhHHHHHHHhhhcCCCChH---------hHhHHHHHHHHHhhhHHHhhcccC
Q 012648 411 DDYADYFRTELLYQTGLAQEPNDPL---------LLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 411 dd~~~~~rtE~~Yk~~I~~dP~N~L---------lL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-|..-|+.++..+..++....+|+- +|-.||+-||. ++.|.||+.+|+
T Consensus 31 ~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~ 87 (167)
T 3ffl_A 31 AAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYT 87 (167)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHH
Confidence 4567889999999998887666664 78899999988 899999999984
No 198
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=56.88 E-value=8.2 Score=38.18 Aligned_cols=47 Identities=6% Similarity=0.021 Sum_probs=36.4
Q ss_pred cchhhhhHHHHHHHhhhc-----CCCChHhHh---HHHHHHHHHhhhHHHhhcccC
Q 012648 412 DYADYFRTELLYQTGLAQ-----EPNDPLLLA---NYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 412 d~~~~~rtE~~Yk~~I~~-----dP~N~LlL~---NYAqFL~~V~~D~drAEeYyk 459 (459)
+..+|+.++.||+++|+. -|++|.+.. |-|. ||.-+++++.|++||+
T Consensus 341 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~-~~~~~g~~~eA~~~~~ 395 (429)
T 3qwp_A 341 NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGK-LQLHQGMFPQAMKNLR 395 (429)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH-HHHHTTCHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHH-HHHhcCCHHHHHHHHH
Confidence 356889999999999965 578877654 5555 4566999999999874
No 199
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=54.78 E-value=4.8 Score=38.85 Aligned_cols=41 Identities=12% Similarity=-0.010 Sum_probs=29.5
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHH---HhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYI---VAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~---V~~D~drAEeYy 458 (459)
++..+..+|++++ |+|+...-|.+..+.. |.+|+++|.+||
T Consensus 302 d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~ 345 (452)
T 3e4b_A 302 DAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHL 345 (452)
T ss_dssp CHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHH
Confidence 5667777888877 7788777777765544 355777777776
No 200
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=54.32 E-value=5.3 Score=35.85 Aligned_cols=44 Identities=7% Similarity=0.070 Sum_probs=33.8
Q ss_pred hhhhhHHHHHHHhhhcCC--CCh----HhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEP--NDP----LLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP--~N~----LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+|+++|+..+ +|+ ..+.|-|..+.. +|+++|.+||+
T Consensus 90 g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~--g~~~~A~~~~~ 139 (307)
T 2ifu_A 90 QRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP--LDLSKAVHLYQ 139 (307)
T ss_dssp TCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT--TCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc--CCHHHHHHHHH
Confidence 468889999999998843 443 466777776655 99999999983
No 201
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=51.65 E-value=12 Score=33.87 Aligned_cols=45 Identities=18% Similarity=0.355 Sum_probs=34.9
Q ss_pred chhhhhHHHHHHHhhhcCCCChHh-----------------HhHHHHHHHHHhhhHHHhhccc
Q 012648 413 YADYFRTELLYQTGLAQEPNDPLL-----------------LANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP~N~Ll-----------------L~NYAqFL~~V~~D~drAEeYy 458 (459)
..+|..+...|+++|+.+|++... |.|-++. |.-.+|++.|.+||
T Consensus 17 ~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~-y~~~~~~~~a~~~~ 78 (434)
T 4b4t_Q 17 EKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQL-YVTMGAKDKLREFI 78 (434)
T ss_dssp HTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHH-HHHHTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHH-HHHCCCHHHHHHHH
Confidence 357888999999999999987653 4455554 45589999999887
No 202
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=48.54 E-value=9.7 Score=37.63 Aligned_cols=45 Identities=4% Similarity=0.082 Sum_probs=36.1
Q ss_pred hhhhHHHHHHHhhhcCCC--ChHhHhHHHHHHHHH----hhhHHHhhcccC
Q 012648 415 DYFRTELLYQTGLAQEPN--DPLLLANYAQFLYIV----AHDYDRYLNFLS 459 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~--N~LlL~NYAqFL~~V----~~D~drAEeYyk 459 (459)
....+....+|+|+.||+ ++-...=++-+-+.| -||.++|+++|+
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~fe 228 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFE 228 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHH
Confidence 445788899999999999 776776667665555 699999999984
No 203
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=47.34 E-value=11 Score=40.02 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=22.8
Q ss_pred HHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 421 LLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 421 ~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
..|++||...|++.+|.-+||.|... .+++++|.+.|
T Consensus 365 ~il~rAi~~~P~s~~Lwl~~a~~ee~-~~~~e~aR~iy 401 (679)
T 4e6h_A 365 KYLKLGQQCIPNSAVLAFSLSEQYEL-NTKIPEIETTI 401 (679)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHH-hCCHHHHHHHH
Confidence 66666666666666666666666543 45566666554
No 204
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=47.23 E-value=21 Score=31.94 Aligned_cols=19 Identities=21% Similarity=0.163 Sum_probs=9.8
Q ss_pred hhhhHHHHHHHhhhcCCCC
Q 012648 415 DYFRTELLYQTGLAQEPND 433 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N 433 (459)
+++.+..+|++++...|.+
T Consensus 29 ~~~~A~~~~~~al~~~~~~ 47 (373)
T 1hz4_A 29 NPDEAERLAKLALEELPPG 47 (373)
T ss_dssp CHHHHHHHHHHHHHTCCTT
T ss_pred CHHHHHHHHHHHHHcCCCC
Confidence 3445555555555555433
No 205
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=46.29 E-value=14 Score=37.09 Aligned_cols=44 Identities=11% Similarity=-0.087 Sum_probs=34.6
Q ss_pred hhhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 414 ADYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 414 ~~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
.+++.+..+.++||+.||+ .+.+ ...-+++...|++++|.+.|+
T Consensus 291 gd~d~A~~~l~rAl~Ln~s-~~a~-~llG~~~~~~G~~~eA~e~~~ 334 (372)
T 3ly7_A 291 GKTDESYQAINTGIDLEMS-WLNY-VLLGKVYEMKGMNREAADAYL 334 (372)
T ss_dssp TCHHHHHHHHHHHHHHCCC-HHHH-HHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-HHHH-HHHHHHHHHCCCHHHHHHHHH
Confidence 5678899999999999974 5443 333478899999999999873
No 206
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=46.23 E-value=8.6 Score=38.33 Aligned_cols=43 Identities=19% Similarity=0.316 Sum_probs=37.1
Q ss_pred hhhhHHHHHHHhhhcCCCChHhHhHHHHHHHHHhhhHHHhhccc
Q 012648 415 DYFRTELLYQTGLAQEPNDPLLLANYAQFLYIVAHDYDRYLNFL 458 (459)
Q Consensus 415 ~~~rtE~~Yk~~I~~dP~N~LlL~NYAqFL~~V~~D~drAEeYy 458 (459)
+.+++-..|+++|..-|++|-+.-.|++|+-. .+|.++|...|
T Consensus 335 d~~~ar~ife~al~~~~~~~~~~~~yid~e~~-~~~~~~aR~l~ 377 (493)
T 2uy1_A 335 SRATPYNIFSSGLLKHPDSTLLKEEFFLFLLR-IGDEENARALF 377 (493)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 57889999999999999999988889999865 67888887665
No 207
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=36.75 E-value=15 Score=28.71 Aligned_cols=29 Identities=24% Similarity=0.155 Sum_probs=22.4
Q ss_pred CCCChHhHhHHHHHHHHHhh--hHHHhhccc
Q 012648 430 EPNDPLLLANYAQFLYIVAH--DYDRYLNFL 458 (459)
Q Consensus 430 dP~N~LlL~NYAqFL~~V~~--D~drAEeYy 458 (459)
+|+||-++..||+.|+-..+ +.++|+.++
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l 32 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLL 32 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 79999999999999975433 257776654
No 208
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=35.59 E-value=16 Score=33.16 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=33.6
Q ss_pred chhhhhHHHHHHHhhhcCC--CC----hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 413 YADYFRTELLYQTGLAQEP--ND----PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 413 ~~~~~rtE~~Yk~~I~~dP--~N----~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
-.+++.+..+|+++|+..+ +| +..+.|.|.. |.-.+|+++|.+||+
T Consensus 195 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~-y~~~~~~~~A~~~~~ 246 (378)
T 3q15_A 195 FKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANS-YDRSGDDQMAVEHFQ 246 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-HHHHTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HHHCCCHHHHHHHHH
Confidence 4678899999999998633 23 2355566654 456899999999973
No 209
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=34.08 E-value=23 Score=32.45 Aligned_cols=41 Identities=12% Similarity=0.246 Sum_probs=31.3
Q ss_pred hhHHHHHHHhhhcCCCC--------hHhHhHHHHHHHHHhhhHHHhhcccC
Q 012648 417 FRTELLYQTGLAQEPND--------PLLLANYAQFLYIVAHDYDRYLNFLS 459 (459)
Q Consensus 417 ~rtE~~Yk~~I~~dP~N--------~LlL~NYAqFL~~V~~D~drAEeYyk 459 (459)
+++-+.|++||+.-|-. ..++-+||.|. +. +|.|+|.+.|+
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~-ei-~D~d~aR~vy~ 84 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK-AI-QEPDDARDYFQ 84 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHH-HH-HCGGGCHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHH-Hh-cCHHHHHHHHH
Confidence 45667888888887743 35788999884 44 99999999883
No 210
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=32.07 E-value=28 Score=29.40 Aligned_cols=21 Identities=38% Similarity=0.662 Sum_probs=16.8
Q ss_pred hhhcCCCChHhHhHHHHHHHH
Q 012648 426 GLAQEPNDPLLLANYAQFLYI 446 (459)
Q Consensus 426 ~I~~dP~N~LlL~NYAqFL~~ 446 (459)
+++.+|.||.+|++|=.-|-+
T Consensus 42 ~L~~~psNPa~LAe~Qa~lse 62 (92)
T 2g0u_A 42 NLTKNPSDPTALANYQMIMSE 62 (92)
T ss_dssp HHHHSTTCHHHHHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHH
Confidence 356799999999999776643
No 211
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=26.90 E-value=43 Score=28.01 Aligned_cols=23 Identities=39% Similarity=0.551 Sum_probs=18.5
Q ss_pred HHhhhcCCCChHhHhHHHHHHHH
Q 012648 424 QTGLAQEPNDPLLLANYAQFLYI 446 (459)
Q Consensus 424 k~~I~~dP~N~LlL~NYAqFL~~ 446 (459)
.++|+.||.||-+|++|=.-|-+
T Consensus 34 i~~L~~~PsnPa~LAeyQ~kl~e 56 (85)
T 2ca5_A 34 LDKLAKNPSNPQLLAEYQSKLSE 56 (85)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHH
Confidence 34578899999999999776643
Done!