Your job contains 1 sequence.
>012649
MEREGYRGRGRGRGGRDGGSRGGRTGGGDFRHHQPRPQQPQWRRSAPSPGHGSPSPPVRP
WSGPMSPAVRAPSPQPRPQPPPDPSASPVVRPVVAEIQKLKISEPVASSSSSSSHNAARY
TPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVL
AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKL
VNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGY
GLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENA
LKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVMEGQSP
ASVSSSSSSLTSTSLSSDASFDERFYKLHTDLENMMYFV
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012649
(459 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2197545 - symbol:AGO2 "argonaute 2" species:37... 717 1.6e-96 2
TAIR|locus:2197550 - symbol:AGO3 "ARGONAUTE 3" species:37... 592 6.9e-77 2
TAIR|locus:2057851 - symbol:AGO5 "ARGONAUTE 5" species:37... 257 3.0e-36 2
UNIPROTKB|Q69VD5 - symbol:PHN1 "Protein argonaute PNH1" s... 270 4.3e-36 2
UNIPROTKB|Q851R2 - symbol:MEL1 "Protein argonaute MEL1" s... 273 1.4e-35 2
UNIPROTKB|Q4KLV6 - symbol:eif2c4 "Protein argonaute-4" sp... 286 1.5e-35 2
ZFIN|ZDB-GENE-030131-5357 - symbol:ago4 "argonaute RISC c... 284 2.4e-35 2
UNIPROTKB|F1MXK6 - symbol:EIF2C4 "Uncharacterized protein... 282 3.6e-35 2
RGD|1304583 - symbol:Ago4 "argonaute RISC catalytic compo... 281 3.6e-35 2
UNIPROTKB|Q9HCK5 - symbol:EIF2C4 "Protein argonaute-4" sp... 282 3.7e-35 2
MGI|MGI:1924100 - symbol:Ago4 "argonaute RISC catalytic s... 282 3.7e-35 2
UNIPROTKB|F1LUQ5 - symbol:Eif2c4 "Protein Eif2c4" species... 281 4.8e-35 2
UNIPROTKB|F1P3Z1 - symbol:EIF2C4 "Protein argonaute-4" sp... 280 5.8e-35 2
UNIPROTKB|F1SV64 - symbol:EIF2C4 "Uncharacterized protein... 279 7.9e-35 2
MGI|MGI:2446632 - symbol:Ago2 "argonaute RISC catalytic s... 277 1.6e-34 2
RGD|621255 - symbol:Ago2 "argonaute RISC catalytic compon... 277 1.6e-34 2
UNIPROTKB|O77503 - symbol:EIF2C2 "Protein argonaute-2" sp... 275 2.5e-34 2
UNIPROTKB|Q9UKV8 - symbol:EIF2C2 "Protein argonaute-2" sp... 274 3.4e-34 2
UNIPROTKB|B0JYP5 - symbol:EIF2C2 "Protein argonaute-2" sp... 274 3.4e-34 2
UNIPROTKB|Q6QME8 - symbol:EIF2C2 "Protein argonaute-2" sp... 274 3.4e-34 2
UNIPROTKB|D4A2P5 - symbol:Eif2c4 "Protein Eif2c4" species... 273 5.6e-34 2
TAIR|locus:2170897 - symbol:AGO10 "ARGONAUTE 10" species:... 253 1.2e-33 2
TAIR|locus:2007111 - symbol:AGO7 "ARGONAUTE7" species:370... 233 1.8e-33 2
UNIPROTKB|F1NL39 - symbol:LOC100858102 "Uncharacterized p... 260 1.1e-32 2
UNIPROTKB|Q6DJB9 - symbol:eif2c2 "Protein argonaute-2" sp... 259 1.4e-32 2
UNIPROTKB|Q6DCX2 - symbol:eif2c2 "Protein argonaute-2" sp... 257 2.3e-32 2
UNIPROTKB|Q75HC2 - symbol:AGO7 "Protein argonaute 7" spec... 216 4.0e-30 2
UNIPROTKB|F1PQZ7 - symbol:EIF2C2 "Uncharacterized protein... 248 8.1e-30 2
FB|FBgn0262739 - symbol:AGO1 "Argonaute-1" species:7227 "... 245 9.7e-29 2
UNIPROTKB|F1MXX2 - symbol:EIF2C1 "Uncharacterized protein... 239 7.6e-28 2
WB|WBGene00000106 - symbol:alg-2 species:6239 "Caenorhabd... 234 9.0e-28 2
UNIPROTKB|F1P3Y9 - symbol:EIF2C1 "Uncharacterized protein... 238 9.8e-28 2
UNIPROTKB|F1PGP5 - symbol:EIF2C1 "Uncharacterized protein... 237 1.4e-27 2
UNIPROTKB|Q9UL18 - symbol:EIF2C1 "Protein argonaute-1" sp... 237 1.4e-27 2
UNIPROTKB|F1SV63 - symbol:EIF2C1 "Uncharacterized protein... 237 1.4e-27 2
MGI|MGI:2446630 - symbol:Ago1 "argonaute RISC catalytic s... 237 1.4e-27 2
RGD|1304619 - symbol:Ago1 "argonaute RISC catalytic compo... 237 1.4e-27 2
ZFIN|ZDB-GENE-060503-452 - symbol:ago3b "argonaute RISC c... 219 8.7e-25 2
UNIPROTKB|F1LZ24 - symbol:Eif2c3 "Protein Eif2c3" species... 211 2.2e-24 2
UNIPROTKB|F1P3Z0 - symbol:EIF2C3 "Protein argonaute-3" sp... 212 2.6e-24 2
UNIPROTKB|F1MG44 - symbol:EIF2C3 "Protein argonaute-3" sp... 212 2.6e-24 2
UNIPROTKB|E2R0U1 - symbol:EIF2C3 "Uncharacterized protein... 212 2.6e-24 2
UNIPROTKB|Q9H9G7 - symbol:EIF2C3 "Protein argonaute-3" sp... 212 2.6e-24 2
UNIPROTKB|F1LUS2 - symbol:Eif2c3 "Protein Eif2c3" species... 211 3.3e-24 2
UNIPROTKB|Q5ZLG4 - symbol:EIF2C3 "Protein argonaute-3" sp... 208 8.3e-24 2
MGI|MGI:2446634 - symbol:Ago3 "argonaute RISC catalytic s... 206 1.4e-23 2
UNIPROTKB|E1C5I5 - symbol:EIF2C4 "Protein argonaute-4" sp... 202 4.6e-23 2
UNIPROTKB|Q5ZMW0 - symbol:EIF2C4 "Protein argonaute-4" sp... 202 4.6e-23 2
WB|WBGene00000105 - symbol:alg-1 species:6239 "Caenorhabd... 195 6.0e-23 2
UNIPROTKB|F1PGN2 - symbol:EIF2C4 "Uncharacterized protein... 199 1.1e-22 2
UNIPROTKB|Q6T5B7 - symbol:EIF2C3 "Protein argonaute-3" sp... 209 3.2e-21 2
UNIPROTKB|Q5TA58 - symbol:EIF2C1 "Protein argonaute-1" sp... 179 3.3e-20 2
TAIR|locus:2179008 - symbol:AGO9 "ARGONAUTE 9" species:37... 123 2.1e-17 3
UNIPROTKB|F1RSJ1 - symbol:EIF2C2 "Uncharacterized protein... 217 4.1e-15 1
TAIR|locus:2147072 - symbol:AT5G21030 species:3702 "Arabi... 166 1.5e-14 2
TAIR|locus:2059258 - symbol:AGO4 "ARGONAUTE 4" species:37... 118 9.8e-14 3
POMBASE|SPCC736.11 - symbol:ago1 "argonaute" species:4896... 131 2.2e-13 2
FB|FBgn0087035 - symbol:AGO2 "Argonaute 2" species:7227 "... 135 2.1e-12 2
UNIPROTKB|Q5TA56 - symbol:EIF2C3 "Protein argonaute-3" sp... 167 1.0e-11 1
ASPGD|ASPL0000044981 - symbol:rsdA species:162425 "Emeric... 124 9.8e-11 2
UNIPROTKB|G4N9J3 - symbol:MGG_14873 "Uncharacterized prot... 132 5.9e-10 2
WB|WBGene00011910 - symbol:T22B3.2b species:6239 "Caenorh... 139 2.1e-09 2
WB|WBGene00006449 - symbol:tag-76 species:6239 "Caenorhab... 139 5.6e-09 2
TAIR|locus:2059370 - symbol:AGO6 "ARGONAUTE 6" species:37... 103 8.6e-09 3
ASPGD|ASPL0000078334 - symbol:smsA species:162425 "Emeric... 103 0.00026 2
>TAIR|locus:2197545 [details] [associations]
symbol:AGO2 "argonaute 2" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0035197 "siRNA
binding" evidence=IDA] [GO:0051607 "defense response to virus"
evidence=IMP] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006417 GO:GO:0006355 GO:GO:0042742 GO:GO:0006351
GO:GO:0051607 GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 EMBL:AC007654 EMBL:BT005914 EMBL:AK118463
IPI:IPI00546861 PIR:H86438 RefSeq:NP_174413.2 UniGene:At.40380
PDB:4G0M PDBsum:4G0M ProteinModelPortal:Q9SHF3 SMR:Q9SHF3
IntAct:Q9SHF3 PaxDb:Q9SHF3 PRIDE:Q9SHF3 EnsemblPlants:AT1G31280.1
GeneID:840016 KEGG:ath:AT1G31280 TAIR:At1g31280 eggNOG:NOG275416
InParanoid:Q9SHF3 OMA:DIPCLDL PhylomeDB:Q9SHF3
ProtClustDB:CLSN2682370 Genevestigator:Q9SHF3 GO:GO:0035197
Uniprot:Q9SHF3
Length = 1014
Score = 717 (257.5 bits), Expect = 1.6e-96, Sum P(2) = 1.6e-96
Identities = 144/249 (57%), Positives = 192/249 (77%)
Query: 119 RYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKT 178
R P+KRPD GG +A+R VN++VNH+ VNF PES IRHYD+++K +I P K+S+
Sbjct: 158 RKEPMKRPDRGGVVAVRRVNLYVNHYKVNFNPESVIRHYDVEIKGEI-PTK----KVSRF 212
Query: 179 VLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTI 238
LA+VR+K+ D PD+FPL+MTAYDG+KNIFSA+ELPTG + VE+P+ E+M+ R+Y FTI
Sbjct: 213 ELAMVRDKVFTDNPDEFPLAMTAYDGQKNIFSAVELPTGSYKVEYPKTEEMRGRSYTFTI 272
Query: 239 KLVNELKLCKLKEYLTG-SLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDD 297
K VN LKL LKEY+TG S F+ PRD+LQGMDVVMKE+PS+ MI+VG+SF E PD+D
Sbjct: 273 KQVNVLKLGDLKEYMTGRSSFN-PRDVLQGMDVVMKEHPSKCMITVGKSFFTRETEPDED 331
Query: 298 LGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-DVNGFRDWRK 356
+G+ A++G++H LK T+QGL+LCLDYSVLAFRK + VI++L+ + N+ D+ FR R
Sbjct: 332 FRFGVIAAKGYRHTLKPTAQGLSLCLDYSVLAFRKAMSVIEYLKLYFNWSDMRQFRR-RD 390
Query: 357 VENALKGLK 365
VE L GLK
Sbjct: 391 VEEELIGLK 399
Score = 264 (98.0 bits), Expect = 1.6e-96, Sum P(2) = 1.6e-96
Identities = 50/95 (52%), Positives = 61/95 (64%)
Query: 367 GFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVMEGQXXXX--XX 424
GFTSDQ+QKLI+ MCFTF RCTKPVSLVPPVYYAD+VA+RGR+YHEA +
Sbjct: 920 GFTSDQVQKLIFEMCFTFTRCTKPVSLVPPVYYADMVAFRGRMYHEASSREKNFKQPRGA 979
Query: 425 XXXXXXXXXXXXXXXXFDERFYKLHTDLENMMYFV 459
D+ +KLH +LEN+M+FV
Sbjct: 980 STSAASLASSLSSLTIEDKAIFKLHAELENVMFFV 1014
>TAIR|locus:2197550 [details] [associations]
symbol:AGO3 "ARGONAUTE 3" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0006417
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
SUPFAM:SSF53098 HOGENOM:HOG000116043 KO:K11593 GO:GO:0031047
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:AC007654
eggNOG:NOG275416 ProtClustDB:CLSN2682370 IPI:IPI00516671
RefSeq:NP_174414.1 UniGene:At.51183 ProteinModelPortal:Q9SHF2
SMR:Q9SHF2 PaxDb:Q9SHF2 PRIDE:Q9SHF2 EnsemblPlants:AT1G31290.1
GeneID:840017 KEGG:ath:AT1G31290 TAIR:At1g31290 InParanoid:Q9SHF2
OMA:ELAMVKE PhylomeDB:Q9SHF2 Genevestigator:Q9SHF2 Uniprot:Q9SHF2
Length = 1194
Score = 592 (213.5 bits), Expect = 6.9e-77, Sum P(2) = 6.9e-77
Identities = 127/249 (51%), Positives = 174/249 (69%)
Query: 122 PIKRPDGGGTLAIR-TVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVL 180
P+KRPD GG + ++ +N+ VNHF V+F+ ES IRHYD+D+K G N + K+S+ L
Sbjct: 333 PVKRPDKGGNIKVKGVINLSVNHFRVSFSTESVIRHYDVDIK---GENSSK--KISRFEL 387
Query: 181 AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGED-MKYRTYVFTIK 239
A+V+ KL +D D FP +MTAYDG+KNIFSA+ELPTG F V+F E E+ M+ R+Y F IK
Sbjct: 388 AMVKEKLFKDNND-FPNAMTAYDGQKNIFSAVELPTGSFKVDFSETEEIMRGRSYTFIIK 446
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLG 299
V ELKL L+ Y+ G IPRD+LQGMDVVMKE+PS+RMI+VG+ F + D G
Sbjct: 447 QVKELKLLDLQAYIDGRSTFIPRDVLQGMDVVMKEHPSKRMITVGKRFFSTRL--EIDFG 504
Query: 300 YGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-DVNGFRDWRK-- 356
YG+ A++GF H LK T QGL+LCL+ S+LAFRK + VI++L+ + + ++ F++ R
Sbjct: 505 YGVGAAKGFHHTLKPTVQGLSLCLNSSLLAFRKAISVIEYLKLYFGWRNIRQFKNCRPDD 564
Query: 357 VENALKGLK 365
V L GLK
Sbjct: 565 VVQELIGLK 573
Score = 221 (82.9 bits), Expect = 6.9e-77, Sum P(2) = 6.9e-77
Identities = 42/95 (44%), Positives = 57/95 (60%)
Query: 367 GFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEA-VMEGQXXXXXXX 425
GF S+Q+QKLI+++CFTF RCTKPV+LVPPV YAD A RGR+Y+EA +M+
Sbjct: 1100 GFNSNQIQKLIFDLCFTFTRCTKPVALVPPVSYADKAASRGRVYYEASLMKKNSKQSRGA 1159
Query: 426 XXXXXXXXXXXXXXXF-DERFYKLHTDLENMMYFV 459
D+ +K+H +EN M+FV
Sbjct: 1160 SSSSASVASSSSSVTMEDKEIFKVHAGIENFMFFV 1194
>TAIR|locus:2057851 [details] [associations]
symbol:AGO5 "ARGONAUTE 5" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0006417
GO:GO:0006355 GO:GO:0006351 EMBL:AC006929 GO:GO:0030529
GO:GO:0007143 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035197 IPI:IPI00516720 PIR:A84678
RefSeq:NP_850110.1 UniGene:At.50103 PDB:4G0O PDBsum:4G0O
ProteinModelPortal:Q9SJK3 SMR:Q9SJK3 PaxDb:Q9SJK3 PRIDE:Q9SJK3
EnsemblPlants:AT2G27880.1 GeneID:817334 KEGG:ath:AT2G27880
TAIR:At2g27880 InParanoid:Q9SJK3 OMA:AREGPVE PhylomeDB:Q9SJK3
Genevestigator:Q9SJK3 GermOnline:AT2G27880 GO:GO:0005731
GO:GO:0033169 GO:GO:0007140 GO:GO:0009561 GO:GO:0055046
Uniprot:Q9SJK3
Length = 997
Score = 257 (95.5 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 85/260 (32%), Positives = 131/260 (50%)
Query: 122 PIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLA 181
P+ RP G GTL + V + NHF V + + HYD+ + P++ +SKTV
Sbjct: 148 PV-RP-GRGTLG-KKVMVRANHFLVQVA-DRDLYHYDVSINPEV---------ISKTVNR 194
Query: 182 IVRNKLCEDYPDQFPLSMT-AYDGEKNIFSAIELP--TGKFNVEFPE----GEDMKYRTY 234
V L ++Y D + AYDG K++++A LP + +F V E G K R +
Sbjct: 195 NVMKLLVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNLAEKRADGSSGKDRPF 254
Query: 235 VFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFP 294
+K V L +L+++L P D +Q +DVV+++ PS +SVGRSF
Sbjct: 255 KVAVKNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPSNDYVSVGRSFFHTSLGK 314
Query: 295 D--D---DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-DV 348
D D +LG G+ RG+ L+ T GL+L +D S +F + + V DF+ + +N D+
Sbjct: 315 DARDGRGELGDGIEYWRGYFQSLRLTQMGLSLNIDVSARSFYEPIVVTDFISKFLNIRDL 374
Query: 349 NG-FRDWR--KVENALKGLK 365
N RD KV+ L+ LK
Sbjct: 375 NRPLRDSDRLKVKKVLRTLK 394
Score = 174 (66.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 365 KHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVM 415
++GFT+DQLQ L N+C+T+ARCTK VS+VPP YYA L A+R R Y E+ M
Sbjct: 911 ENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEM 961
Score = 47 (21.6 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 159 IDVKPDIGPNHGRPVKLSKTVLAIVR--------NKLCEDYPDQFPLSMTAYDGEKN 207
I + PD+ ++G+ ++ +T L IV NKL + Y + L + G +N
Sbjct: 640 IVILPDVTGSYGKIKRICETELGIVSQCCQPRQVNKLNKQYMENVALKINVKTGGRN 696
>UNIPROTKB|Q69VD5 [details] [associations]
symbol:PHN1 "Protein argonaute PNH1" species:39947 "Oryza
sativa Japonica Group" [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0019827
"stem cell maintenance" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
EMBL:AP008212 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
GO:GO:0031047 GO:GO:0048366 GO:GO:0010586 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0003743 HSSP:Q9UL18
GO:GO:0019827 EMBL:AB081950 EMBL:AP004236 ProteinModelPortal:Q69VD5
KEGG:dosa:Os06t0597400-00 Gramene:Q69VD5 Uniprot:Q69VD5
Length = 979
Score = 270 (100.1 bits), Expect = 4.3e-36, Sum P(2) = 4.3e-36
Identities = 78/254 (30%), Positives = 129/254 (50%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ R V + NHF P+ + YD+ + P++ S++V +
Sbjct: 126 RRP-GFGTVGARCV-VKANHFLAEL-PDKDLTQYDVKITPEVS---------SRSVNRAI 173
Query: 184 RNKLCEDYPDQ-FPLSMTAYDGEKNIFSAIELP--TGKFNVEFPEGED-----MKYRTYV 235
++L Y D + AYDG KN+++A LP +F V + +D + R Y
Sbjct: 174 MSELVRLYHDSDLGGRLPAYDGRKNLYTAGTLPFDAREFVVRLTDDDDGTGVPPREREYR 233
Query: 236 FTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPD 295
IK L L++++ G P++ LQ +D+V++E +RR +S+GRSF+ +
Sbjct: 234 VAIKFAARADLHHLRQFIAGRQADAPQEALQVLDIVLRELANRRYVSIGRSFYSPDIRKP 293
Query: 296 DDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDV--NGFRD 353
LG GL + GF ++ T GL+L +D S AF + LPVI+F+ + + DV D
Sbjct: 294 QRLGDGLQSWCGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQILGKDVISRPLSD 353
Query: 354 WR--KVENALKGLK 365
K++ AL+G+K
Sbjct: 354 ANRIKIKKALRGVK 367
Score = 159 (61.0 bits), Expect = 4.3e-36, Sum P(2) = 4.3e-36
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 365 KHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVM-EGQ 418
++ FT+D++Q L N+C+T+ARCT+ VS+VPP YYA L A+R R Y E M E Q
Sbjct: 894 ENNFTADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMSENQ 948
>UNIPROTKB|Q851R2 [details] [associations]
symbol:MEL1 "Protein argonaute MEL1" species:39947 "Oryza
sativa Japonica Group" [GO:0005730 "nucleolus" evidence=IMP]
[GO:0005731 "nucleolus organizer region" evidence=IMP] [GO:0005737
"cytoplasm" evidence=RCA] [GO:0007140 "male meiosis" evidence=IMP]
[GO:0007143 "female meiosis" evidence=IMP] [GO:0009561
"megagametogenesis" evidence=IMP] [GO:0033169 "histone H3-K9
demethylation" evidence=IDA] [GO:0035197 "siRNA binding"
evidence=ISS] [GO:0055046 "microgametogenesis" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:DP000009 EMBL:AP008209
GO:GO:0007143 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
KO:K11596 GO:GO:0035197 HSSP:Q9UL18 OMA:AREGPVE GO:GO:0005731
GO:GO:0033169 GO:GO:0007140 GO:GO:0009561 GO:GO:0055046
EMBL:AB297928 EMBL:AC104321 RefSeq:NP_001051583.2 UniGene:Os.80058
ProteinModelPortal:Q851R2 EnsemblPlants:LOC_Os03g58600.1
GeneID:4334449 KEGG:dosa:Os02t0616300-00 KEGG:dosa:Os03t0789466-00
KEGG:dosa:Os03t0800200-00 KEGG:osa:4334449 Gramene:Q851R2
ProtClustDB:CLSN2694409 Uniprot:Q851R2
Length = 1058
Score = 273 (101.2 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 82/264 (31%), Positives = 140/264 (53%)
Query: 125 RPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVR 184
RP G A + V I NHF VN ++ + HYD+ + P+ + R ++ VL
Sbjct: 202 RPGFGA--AGKKVMIRANHFLVNVA-DNNLFHYDVSINPE---SKSRAT--NREVL---- 249
Query: 185 NKLCEDY-PDQFPLSMTAYDGEKNIFSAIELP--TGKFNVEF--PEGEDMKY--RTYVFT 237
N+L + + + AYDG K++++A LP + +F V+ PE +D + R Y T
Sbjct: 250 NELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKERAEREYKIT 309
Query: 238 IKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDD 297
I++ L L+++L G +P++ +Q +DVV++E+PS ++V RSF + D
Sbjct: 310 IRIAGRTDLYHLQQFLLGRQRDMPQETIQVLDVVLRESPSWNYVTVSRSFFSTQFGHRGD 369
Query: 298 LGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-DVN---GFRD 353
+G GL RG+ L+ T GL+L +D S +F K + VI F++E +N D + RD
Sbjct: 370 IGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDRD 429
Query: 354 WRKVENALKGLK--HGFTSDQLQK 375
K++ AL+G++ DQ+++
Sbjct: 430 RVKIKKALRGVRIETNHQEDQIRR 453
Score = 152 (58.6 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHE 412
FT+D LQ L N+C+T+ARCT+ VS+VPP YYA L A+R R Y E
Sbjct: 972 FTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAFRARYYVE 1016
Score = 37 (18.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 187 LCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVE 222
L +++ + +S TA + SA P G+ +VE
Sbjct: 149 LAKEFEQKLFVSETALAPPAAVASAAAAPAGEASVE 184
>UNIPROTKB|Q4KLV6 [details] [associations]
symbol:eif2c4 "Protein argonaute-4" species:8355 "Xenopus
laevis" [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0003723 SUPFAM:SSF53098 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0035278
HSSP:Q9UL18 GO:GO:0006402 CTD:192670 EMBL:BC098982
RefSeq:NP_001089574.1 UniGene:Xl.79902 ProteinModelPortal:Q4KLV6
SMR:Q4KLV6 GeneID:734630 KEGG:xla:734630 Xenbase:XB-GENE-1006885
Uniprot:Q4KLV6
Length = 884
Score = 286 (105.7 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 88/274 (32%), Positives = 139/274 (50%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P +RP G GTL + + + NHF V P+ + HYD+D+KP+ RP ++++ V
Sbjct: 36 FQPPRRP-GLGTLG-KPIRLLANHFQVQI-PKIDVYHYDVDIKPE-----KRPRRVNREV 87
Query: 180 L-AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYV 235
+ +VR+ + D P YDG++N+++A LP G+ V+ GE K +T+
Sbjct: 88 VDTMVRHFKMPIFGDNQP----GYDGKRNMYTAHPLPIGRDRVDLEVTLPGEG-KDQTFK 142
Query: 236 FTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFP 294
TI+ V+ + L L E L+G L +P D +Q +DV+ + PS R VGRSF P E +
Sbjct: 143 VTIQWVSVVSLQLLLEALSGHLSEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYY 202
Query: 295 DDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINFDVN 349
LG G GF ++ + L +D S AF + PVI+F+ E +IN
Sbjct: 203 HP-LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDVQNINEQTK 261
Query: 350 GFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 262 PLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 295
Score = 136 (52.9 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 799 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 841
>ZFIN|ZDB-GENE-030131-5357 [details] [associations]
symbol:ago4 "argonaute RISC catalytic component 4"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950
ZFIN:ZDB-GENE-030131-5357 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:CABZ01005377 EMBL:CABZ01005378
EMBL:CABZ01005379 IPI:IPI00996534 Ensembl:ENSDART00000129463
Bgee:E7F814 Uniprot:E7F814
Length = 874
Score = 284 (105.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 86/274 (31%), Positives = 141/274 (51%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P +RP G GT+ + + + NHF V P+ + HYDID+KP+ RP ++++ V
Sbjct: 15 FQPPRRP-GLGTVG-KPIRLLANHFQVQI-PKIDVYHYDIDIKPE-----KRPRRVNREV 66
Query: 180 L-AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYV 235
+ +VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +T+
Sbjct: 67 VDTMVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDLEVTLPGEG-KDQTFK 121
Query: 236 FTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFP 294
+++ V+ + L L E L+G L +P D +Q +DV+ + PS R VGRSF P E +
Sbjct: 122 VSLQWVSVVSLQMLLEALSGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYY 181
Query: 295 DDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINFDVN 349
LG G GF ++ + L +D S AF + PVI+F+ E +IN
Sbjct: 182 HP-LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNINEQTK 240
Query: 350 GFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 241 PLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 274
Score = 136 (52.9 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 789 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 831
>UNIPROTKB|F1MXK6 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:DAAA02009205
IPI:IPI01001804 Ensembl:ENSBTAT00000020250 Uniprot:F1MXK6
Length = 850
Score = 282 (104.3 bits), Expect = 3.6e-35, Sum P(2) = 3.6e-35
Identities = 85/277 (30%), Positives = 142/277 (51%)
Query: 117 AARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLS 176
A+ + P +RP G GT+ + + + NHF V P+ + HYD+D+KP+ RP +++
Sbjct: 9 ASLFQPPRRP-GLGTVG-KPIRLLANHFQVQI-PKIDVYHYDVDIKPE-----KRPRRVN 60
Query: 177 KTVL-AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYR 232
+ V+ +VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +
Sbjct: 61 REVVDTMVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQ 115
Query: 233 TYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVE 291
T+ +++ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E
Sbjct: 116 TFKVSVQWVSVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPE 175
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINF 346
+ LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 176 GYYHP-LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINE 234
Query: 347 DVNGFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 235 QTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 271
Score = 136 (52.9 bits), Expect = 3.6e-35, Sum P(2) = 3.6e-35
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 765 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 807
>RGD|1304583 [details] [associations]
symbol:Ago4 "argonaute RISC catalytic component 4" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006402 "mRNA catabolic process" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISO] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:1304583
GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 IPI:IPI00390206 Ensembl:ENSRNOT00000035394
Uniprot:F1LVZ1
Length = 798
Score = 281 (104.0 bits), Expect = 3.6e-35, Sum P(2) = 3.6e-35
Identities = 85/277 (30%), Positives = 142/277 (51%)
Query: 117 AARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLS 176
A+ + P +RP G GT+ + + + NHF V P+ + HYD+D+KP+ RP +++
Sbjct: 9 ASLFQPPRRP-GLGTVG-KPIRLLANHFQVQI-PKIDVYHYDVDIKPE-----KRPRRVN 60
Query: 177 KTVL-AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYR 232
+ V+ +VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +
Sbjct: 61 REVVDTMVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQ 115
Query: 233 TYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVE 291
T+ +++ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E
Sbjct: 116 TFKVSVQWVSVVSLQLLLEALAGHLSEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPE 175
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINF 346
+ LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 176 GYYHP-LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINE 234
Query: 347 DVNGFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 235 QTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 271
Score = 136 (52.9 bits), Expect = 3.6e-35, Sum P(2) = 3.6e-35
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 713 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 755
>UNIPROTKB|Q9HCK5 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IDA] [GO:0035278 "negative regulation
of translation involved in gene silencing by miRNA" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0010467
EMBL:CH471059 GO:GO:0007219 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 OMA:ENDILRT
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0035278 GO:GO:0006402 CTD:192670
EMBL:AB046787 EMBL:AL359186 EMBL:AL354864 EMBL:BC152450
IPI:IPI00030602 RefSeq:NP_060099.2 UniGene:Hs.471492
ProteinModelPortal:Q9HCK5 SMR:Q9HCK5 IntAct:Q9HCK5 STRING:Q9HCK5
PhosphoSite:Q9HCK5 DMDM:38372393 PaxDb:Q9HCK5 PRIDE:Q9HCK5
DNASU:192670 Ensembl:ENST00000373210 GeneID:192670 KEGG:hsa:192670
UCSC:uc001bzj.2 GeneCards:GC01P036273 HGNC:HGNC:18424 HPA:CAB012179
MIM:607356 neXtProt:NX_Q9HCK5 PharmGKB:PA38330 InParanoid:Q9HCK5
PhylomeDB:Q9HCK5 GenomeRNAi:192670 NextBio:89373
ArrayExpress:Q9HCK5 Bgee:Q9HCK5 CleanEx:HS_EIF2C4
Genevestigator:Q9HCK5 GermOnline:ENSG00000134698 Uniprot:Q9HCK5
Length = 861
Score = 282 (104.3 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 85/277 (30%), Positives = 142/277 (51%)
Query: 117 AARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLS 176
A+ + P +RP G GT+ + + + NHF V P+ + HYD+D+KP+ RP +++
Sbjct: 10 ASLFQPPRRP-GLGTVG-KPIRLLANHFQVQI-PKIDVYHYDVDIKPE-----KRPRRVN 61
Query: 177 KTVL-AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYR 232
+ V+ +VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +
Sbjct: 62 REVVDTMVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQ 116
Query: 233 TYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVE 291
T+ +++ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E
Sbjct: 117 TFKVSVQWVSVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPE 176
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINF 346
+ LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 177 GYYHP-LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINE 235
Query: 347 DVNGFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 236 QTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 272
Score = 136 (52.9 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 776 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 818
>MGI|MGI:1924100 [details] [associations]
symbol:Ago4 "argonaute RISC catalytic subunit 4"
species:10090 "Mus musculus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0031047
"gene silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:1924100
GO:GO:0003723 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 EMBL:AL606935 GeneTree:ENSGT00640000091310
GO:GO:0006402 CTD:192670 EMBL:AB081474 EMBL:AK030018 EMBL:BC096023
EMBL:AK129395 IPI:IPI00622422 IPI:IPI00762672 RefSeq:NP_694817.2
UniGene:Mm.86705 ProteinModelPortal:Q8CJF8 SMR:Q8CJF8 STRING:Q8CJF8
PhosphoSite:Q8CJF8 PaxDb:Q8CJF8 PRIDE:Q8CJF8
Ensembl:ENSMUST00000084289 GeneID:76850 KEGG:mmu:76850
UCSC:uc008utk.2 NextBio:345923 Bgee:Q8CJF8 Genevestigator:Q8CJF8
GermOnline:ENSMUSG00000042500 Uniprot:Q8CJF8
Length = 861
Score = 282 (104.3 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 87/279 (31%), Positives = 143/279 (51%)
Query: 117 AARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLS 176
A+ + P +RP G GT+ + + + NHF V P+ + HYD+D+KP+ RP +++
Sbjct: 10 ASLFQPPRRP-GLGTVG-KPIRLLANHFQVQI-PKIDVYHYDVDIKPE-----KRPRRVN 61
Query: 177 KTVL-AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGK----FNVEFP-EGEDMK 230
+ V+ +VR+ + + D+ P YDG++N+++A LP G+ V P EG+D
Sbjct: 62 REVVDTMVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRIDMEVTLPGEGKDQT 117
Query: 231 YRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-P 289
++ V + +V+ L+L L E L G L +P D +Q +DV+ + PS R VGRSF P
Sbjct: 118 FKVSVQWVSVVS-LQL--LLEALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSP 174
Query: 290 VEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HI 344
E + LG G GF ++ + L +D S AF + P+I+F+ E +I
Sbjct: 175 PEGYYHP-LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNI 233
Query: 345 NFDVNGFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
N D ++V+ ++GLK T K Y +C
Sbjct: 234 NEQTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 272
Score = 136 (52.9 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 776 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 818
>UNIPROTKB|F1LUQ5 [details] [associations]
symbol:Eif2c4 "Protein Eif2c4" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1304583 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 IPI:IPI00359347
Ensembl:ENSRNOT00000035373 Uniprot:F1LUQ5
Length = 860
Score = 281 (104.0 bits), Expect = 4.8e-35, Sum P(2) = 4.8e-35
Identities = 85/277 (30%), Positives = 142/277 (51%)
Query: 117 AARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLS 176
A+ + P +RP G GT+ + + + NHF V P+ + HYD+D+KP+ RP +++
Sbjct: 9 ASLFQPPRRP-GLGTVG-KPIRLLANHFQVQI-PKIDVYHYDVDIKPE-----KRPRRVN 60
Query: 177 KTVL-AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYR 232
+ V+ +VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +
Sbjct: 61 REVVDTMVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQ 115
Query: 233 TYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVE 291
T+ +++ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E
Sbjct: 116 TFKVSVQWVSVVSLQLLLEALAGHLSEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPE 175
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINF 346
+ LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 176 GYYHP-LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINE 234
Query: 347 DVNGFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 235 QTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 271
Score = 136 (52.9 bits), Expect = 4.8e-35, Sum P(2) = 4.8e-35
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 817
>UNIPROTKB|F1P3Z1 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006402
"mRNA catabolic process" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 IPI:IPI00735148
EMBL:AADN02043839 EMBL:AADN02043840 EMBL:AADN02043841
Ensembl:ENSGALT00000003521 ArrayExpress:F1P3Z1 Uniprot:F1P3Z1
Length = 847
Score = 280 (103.6 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 85/272 (31%), Positives = 139/272 (51%)
Query: 122 PIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVL- 180
P +RP G GT+ + + + NHF V P+ + HYD+D+KP+ RP ++++ V+
Sbjct: 1 PPRRP-GLGTVG-KPIRLLANHFQVQI-PKIDVYHYDVDIKPE-----KRPRRVNREVVD 52
Query: 181 AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFT 237
+VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +T+ +
Sbjct: 53 TMVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQTFKVS 107
Query: 238 IKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDD 296
I+ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E +
Sbjct: 108 IQWVSVVSLQLLLEALAGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHP 167
Query: 297 DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINFDVNGF 351
LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 168 -LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPL 226
Query: 352 RDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 227 TDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 258
Score = 136 (52.9 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 762 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 804
>UNIPROTKB|F1SV64 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:CU929817
Ensembl:ENSSSCT00000004025 Uniprot:F1SV64
Length = 861
Score = 279 (103.3 bits), Expect = 7.9e-35, Sum P(2) = 7.9e-35
Identities = 84/274 (30%), Positives = 140/274 (51%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P +RP G GT+ + + + NHF V P+ + HYD+D+KP+ RP ++++ V
Sbjct: 13 FQPPRRP-GLGTVG-KPIRLLANHFQVQI-PKIDVYHYDVDIKPE-----KRPRRVNREV 64
Query: 180 L-AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYV 235
+ +VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +T+
Sbjct: 65 VDTMVRHFKIQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQTFK 119
Query: 236 FTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFP 294
+++ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E +
Sbjct: 120 VSVQWVSVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYY 179
Query: 295 DDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINFDVN 349
LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 180 HP-LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTK 238
Query: 350 GFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 239 PLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 272
Score = 136 (52.9 bits), Expect = 7.9e-35, Sum P(2) = 7.9e-35
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 776 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 818
>MGI|MGI:2446632 [details] [associations]
symbol:Ago2 "argonaute RISC catalytic subunit 2"
species:10090 "Mus musculus" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISO;IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003729
"mRNA binding" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005844 "polysome"
evidence=ISO] [GO:0005845 "mRNA cap binding complex" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006379 "mRNA cleavage" evidence=IMP] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016442 "RNA-induced
silencing complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0031047
"gene silencing by RNA" evidence=IEA] [GO:0031054 "pre-miRNA
processing" evidence=ISO] [GO:0035068 "micro-ribonucleoprotein
complex" evidence=ISO;IDA] [GO:0035197 "siRNA binding"
evidence=ISO] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=ISO] [GO:0035279
"mRNA cleavage involved in gene silencing by miRNA" evidence=ISO]
[GO:0045947 "negative regulation of translational initiation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070551 "endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446632
GO:GO:0005634 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0045947 GO:GO:0003729 GO:GO:0006351 GO:GO:0009791
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 GO:GO:0035197
CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 OMA:AIKWMSC EMBL:AB081472 EMBL:BC096465
EMBL:BC128379 EMBL:BC129922 EMBL:AK220193 IPI:IPI00229988
RefSeq:NP_694818.3 UniGene:Mm.23095 UniGene:Mm.391971
UniGene:Mm.440409 UniGene:Mm.476931 UniGene:Mm.486474
UniGene:Mm.490340 ProteinModelPortal:Q8CJG0 SMR:Q8CJG0
DIP:DIP-35014N IntAct:Q8CJG0 STRING:Q8CJG0 PhosphoSite:Q8CJG0
PaxDb:Q8CJG0 PRIDE:Q8CJG0 Ensembl:ENSMUST00000044113 GeneID:239528
KEGG:mmu:239528 InParanoid:A1A563 NextBio:384151 Bgee:Q8CJG0
CleanEx:MM_EIF2C2 Genevestigator:Q8CJG0
GermOnline:ENSMUSG00000036698 Uniprot:Q8CJG0
Length = 860
Score = 277 (102.6 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 88/272 (32%), Positives = 138/272 (50%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P RPD G T RT+ + N F ++ P+ I HY++D+KP+ P R V + V
Sbjct: 24 FKPPPRPDFGTTG--RTIKLQANFFEMDI-PKIDIYHYELDIKPEKCP---RRVN-REIV 76
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVF 236
+V++ + + D+ P+ +DG KN+++A+ LP G+ VE GE K R +
Sbjct: 77 EHMVQHFKTQIFGDRKPV----FDGRKNLYTAMPLPIGRDKVELEVTLPGEG-KDRIFKV 131
Query: 237 TIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDD 296
+IK V+ + L L + L+G L S+P + +Q +DVVM+ PS R VGRSF +
Sbjct: 132 SIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSN 191
Query: 297 DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-----DVNGF 351
LG G GF ++ + + L +D S AF K PVI+F+ E ++F
Sbjct: 192 PLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPL 251
Query: 352 RDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T K Y +C
Sbjct: 252 TDSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 283
Score = 135 (52.6 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>RGD|621255 [details] [associations]
symbol:Ago2 "argonaute RISC catalytic component 2" species:10116
"Rattus norvegicus" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=IEA;ISO;ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=ISO] [GO:0003729
"mRNA binding" evidence=IEA;ISO] [GO:0004521 "endoribonuclease
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005844 "polysome"
evidence=IEA;ISO;ISS] [GO:0005845 "mRNA cap binding complex"
evidence=IEA;ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006379 "mRNA cleavage"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009791 "post-embryonic development" evidence=IEA;ISO]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=NAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0031054
"pre-miRNA processing" evidence=IEA;ISO;ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA;ISO;ISS] [GO:0035197
"siRNA binding" evidence=IEA;ISO;ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=IEA;ISO;ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA;ISO;ISS] [GO:0045947 "negative
regulation of translational initiation" evidence=IEA;ISO;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=IEA;ISO;ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:621255
GO:GO:0005634 GO:GO:0030154 GO:GO:0006355 GO:GO:0046872
GO:GO:0045947 GO:GO:0006351 GO:GO:0009791 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197 CTD:27161
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:AF195534 IPI:IPI00214529
RefSeq:NP_067608.1 UniGene:Rn.35512 ProteinModelPortal:Q9QZ81
SMR:Q9QZ81 STRING:Q9QZ81 GeneID:59117 KEGG:rno:59117
UCSC:RGD:621255 InParanoid:Q9QZ81 NextBio:611775
ArrayExpress:Q9QZ81 Genevestigator:Q9QZ81
GermOnline:ENSRNOG00000008533 Uniprot:Q9QZ81
Length = 860
Score = 277 (102.6 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 88/272 (32%), Positives = 138/272 (50%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P RPD G T RT+ + N F ++ P+ I HY++D+KP+ P R V + V
Sbjct: 24 FKPPPRPDFGTTG--RTIKLQANFFEMDI-PKIDIYHYELDIKPEKCP---RRVN-REIV 76
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVF 236
+V++ + + D+ P+ +DG KN+++A+ LP G+ VE GE K R +
Sbjct: 77 EHMVQHFKTQIFGDRKPV----FDGRKNLYTAMPLPIGRDKVELEVTLPGEG-KDRIFKV 131
Query: 237 TIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDD 296
+IK V+ + L L + L+G L S+P + +Q +DVVM+ PS R VGRSF +
Sbjct: 132 SIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSN 191
Query: 297 DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-----DVNGF 351
LG G GF ++ + + L +D S AF K PVI+F+ E ++F
Sbjct: 192 PLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPL 251
Query: 352 RDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T K Y +C
Sbjct: 252 TDSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 283
Score = 135 (52.6 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>UNIPROTKB|O77503 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9986
"Oryctolagus cuniculus" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISS] [GO:0005844 "polysome" evidence=ISS]
[GO:0005845 "mRNA cap binding complex" evidence=ISS] [GO:0016442
"RNA-induced silencing complex" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0031054 "pre-miRNA
processing" evidence=ISS] [GO:0035068 "micro-ribonucleoprotein
complex" evidence=ISS] [GO:0035197 "siRNA binding" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0045947
"negative regulation of translational initiation" evidence=ISS]
[GO:0070551 "endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0045947 GO:GO:0006351
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0005844 GO:GO:0035278
GO:GO:0035197 CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 EMBL:AF005355 PIR:PC6505
RefSeq:NP_001076179.1 UniGene:Ocu.1816 ProteinModelPortal:O77503
SMR:O77503 STRING:O77503 GeneID:100009457 Uniprot:O77503
Length = 840
Score = 275 (101.9 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 87/272 (31%), Positives = 138/272 (50%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P RPD G + RT+ + N F ++ P+ I HY++D+KP+ P R V + V
Sbjct: 4 FKPPPRPDFG--TSGRTIKLQANFFEMDI-PKIDIYHYELDIKPEKCP---RRVN-REIV 56
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVF 236
+V++ + + D+ P+ +DG KN+++A+ LP G+ VE GE K R +
Sbjct: 57 EHMVQHFKAQIFGDRKPV----FDGRKNLYTAMPLPIGREKVELEVTLPGEG-KDRIFKV 111
Query: 237 TIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDD 296
+IK V+ + L L + L+G L S+P + +Q +DVVM+ PS R VGRSF +
Sbjct: 112 SIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSN 171
Query: 297 DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-----DVNGF 351
LG G GF ++ + + L +D S AF K PVI+F+ E ++F
Sbjct: 172 PLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPL 231
Query: 352 RDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T K Y +C
Sbjct: 232 TDSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 263
Score = 135 (52.6 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 755 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 797
>UNIPROTKB|Q9UKV8 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=NAS] [GO:0006412 "translation" evidence=NAS] [GO:0035279
"mRNA cleavage involved in gene silencing by miRNA"
evidence=IDA;IMP] [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IDA;IMP] [GO:0005845
"mRNA cap binding complex" evidence=IDA] [GO:0045947 "negative
regulation of translational initiation" evidence=IDA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035197 "siRNA
binding" evidence=IDA] [GO:0031054 "pre-miRNA processing"
evidence=IDA] [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IDA] [GO:0000340 "RNA 7-methylguanosine
cap binding" evidence=IDA] [GO:0016442 "RNA-induced silencing
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005844 "polysome" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0004521 "endoribonuclease activity" evidence=EXP] [GO:0005829
"cytosol" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0006413 "translational initiation" evidence=NAS]
Reactome:REACT_71 InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0046872 GO:GO:0045947
GO:GO:0007219 GO:GO:0006351 GO:GO:0009791 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197 CTD:27161
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:AC067931 EMBL:AC107375
EMBL:BC007633 EMBL:BC018727 EMBL:BC125214 EMBL:AY077717
EMBL:BT007229 EMBL:AF121255 IPI:IPI00745433 IPI:IPI00929290
RefSeq:NP_001158095.1 RefSeq:NP_036286.2 UniGene:Hs.449415 PDB:3LUC
PDB:3LUD PDB:3LUG PDB:3LUH PDB:3LUJ PDB:3LUK PDB:3QX8 PDB:3QX9
PDB:4EI1 PDB:4EI3 PDB:4F3T PDBsum:3LUC PDBsum:3LUD PDBsum:3LUG
PDBsum:3LUH PDBsum:3LUJ PDBsum:3LUK PDBsum:3QX8 PDBsum:3QX9
PDBsum:4EI1 PDBsum:4EI3 PDBsum:4F3T ProteinModelPortal:Q9UKV8
SMR:Q9UKV8 DIP:DIP-29194N IntAct:Q9UKV8 MINT:MINT-1957975
STRING:Q9UKV8 PhosphoSite:Q9UKV8 DMDM:229463006 PaxDb:Q9UKV8
PRIDE:Q9UKV8 DNASU:27161 Ensembl:ENST00000220592
Ensembl:ENST00000519980 GeneID:27161 KEGG:hsa:27161 UCSC:uc003yvn.3
UCSC:uc010meo.3 GeneCards:GC08M141541 HGNC:HGNC:3263 HPA:CAB019309
MIM:606229 neXtProt:NX_Q9UKV8 PharmGKB:PA27694 InParanoid:Q9UKV8
OMA:AIKWMSC PhylomeDB:Q9UKV8 ChiTaRS:EIF2C2
EvolutionaryTrace:Q9UKV8 GenomeRNAi:27161 NextBio:49946
ArrayExpress:Q9UKV8 Bgee:Q9UKV8 CleanEx:HS_EIF2C2
Genevestigator:Q9UKV8 GermOnline:ENSG00000123908 GO:GO:0003743
Uniprot:Q9UKV8
Length = 859
Score = 274 (101.5 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 87/272 (31%), Positives = 138/272 (50%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P RPD G + RT+ + N F ++ P+ I HY++D+KP+ P R V + V
Sbjct: 23 FKPPPRPDFG--TSGRTIKLQANFFEMDI-PKIDIYHYELDIKPEKCP---RRVN-REIV 75
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVF 236
+V++ + + D+ P+ +DG KN+++A+ LP G+ VE GE K R +
Sbjct: 76 EHMVQHFKTQIFGDRKPV----FDGRKNLYTAMPLPIGRDKVELEVTLPGEG-KDRIFKV 130
Query: 237 TIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDD 296
+IK V+ + L L + L+G L S+P + +Q +DVVM+ PS R VGRSF +
Sbjct: 131 SIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSN 190
Query: 297 DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-----DVNGF 351
LG G GF ++ + + L +D S AF K PVI+F+ E ++F
Sbjct: 191 PLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPL 250
Query: 352 RDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T K Y +C
Sbjct: 251 TDSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 282
Score = 135 (52.6 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 774 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 816
>UNIPROTKB|B0JYP5 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9913 "Bos
taurus" [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IEA] [GO:0045947 "negative regulation
of translational initiation" evidence=IEA] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IEA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IEA] [GO:0035197 "siRNA binding"
evidence=IEA] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0005845
"mRNA cap binding complex" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0045947 GO:GO:0009791
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 GO:GO:0035197
IPI:IPI00704677 UniGene:Bt.21912 GO:GO:0005845 GO:GO:0016442
GO:GO:0070551 GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 OMA:AIKWMSC
GO:GO:0003743 EMBL:DAAA02037528 EMBL:DAAA02037529 EMBL:DAAA02037530
EMBL:BC151491 SMR:B0JYP5 STRING:B0JYP5 Ensembl:ENSBTAT00000002068
InParanoid:B0JYP5 Uniprot:B0JYP5
Length = 860
Score = 274 (101.5 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 87/272 (31%), Positives = 138/272 (50%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P RPD G + RT+ + N F ++ P+ I HY++D+KP+ P R V + V
Sbjct: 24 FKPPPRPDFG--TSGRTIKLQANFFEMDI-PKIDIYHYELDIKPEKCP---RRVN-REIV 76
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVF 236
+V++ + + D+ P+ +DG KN+++A+ LP G+ VE GE K R +
Sbjct: 77 EHMVQHFKTQIFGDRKPV----FDGRKNLYTAMPLPIGRDKVELEVTLPGEG-KDRIFKV 131
Query: 237 TIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDD 296
+IK V+ + L L + L+G L S+P + +Q +DVVM+ PS R VGRSF +
Sbjct: 132 SIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSN 191
Query: 297 DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-----DVNGF 351
LG G GF ++ + + L +D S AF K PVI+F+ E ++F
Sbjct: 192 PLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPL 251
Query: 352 RDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T K Y +C
Sbjct: 252 TDSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 283
Score = 135 (52.6 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>UNIPROTKB|Q6QME8 [details] [associations]
symbol:EIF2C2 "Protein argonaute-2" species:9913 "Bos
taurus" [GO:0045947 "negative regulation of translational
initiation" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005844 "polysome" evidence=ISS] [GO:0035197
"siRNA binding" evidence=ISS] [GO:0070551 "endoribonuclease
activity, cleaving siRNA-paired mRNA" evidence=ISS] [GO:0031054
"pre-miRNA processing" evidence=ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISS] [GO:0005845 "mRNA
cap binding complex" evidence=ISS] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=ISS] [GO:0016442
"RNA-induced silencing complex" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0045947 GO:GO:0006351 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0035197
EMBL:AY533678 IPI:IPI00704677 RefSeq:NP_991363.1 UniGene:Bt.21912
ProteinModelPortal:Q6QME8 SMR:Q6QME8 STRING:Q6QME8 PRIDE:Q6QME8
GeneID:404130 KEGG:bta:404130 CTD:27161 InParanoid:Q6QME8
NextBio:20817567 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 Uniprot:Q6QME8
Length = 860
Score = 274 (101.5 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 87/272 (31%), Positives = 138/272 (50%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P RPD G + RT+ + N F ++ P+ I HY++D+KP+ P R V + V
Sbjct: 24 FKPPPRPDFG--TSGRTIKLQANFFEMDI-PKIDIYHYELDIKPEKCP---RRVN-REIV 76
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVF 236
+V++ + + D+ P+ +DG KN+++A+ LP G+ VE GE K R +
Sbjct: 77 EHMVQHFKTQIFGDRKPV----FDGRKNLYTAMPLPIGRDKVELEVTLPGEG-KDRIFKV 131
Query: 237 TIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDD 296
+IK V+ + L L + L+G L S+P + +Q +DVVM+ PS R VGRSF +
Sbjct: 132 SIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSN 191
Query: 297 DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-----DVNGF 351
LG G GF ++ + + L +D S AF K PVI+F+ E ++F
Sbjct: 192 PLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPL 251
Query: 352 RDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T K Y +C
Sbjct: 252 TDSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 283
Score = 135 (52.6 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>UNIPROTKB|D4A2P5 [details] [associations]
symbol:Eif2c4 "Protein Eif2c4" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 RGD:1304583 GO:GO:0003723 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0035068 GO:GO:0035278 GO:GO:0006402 IPI:IPI00950544
Ensembl:ENSRNOT00000066541 Uniprot:D4A2P5
Length = 995
Score = 273 (101.2 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 81/261 (31%), Positives = 137/261 (52%)
Query: 117 AARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLS 176
A+ + P +RP G GT+ + + + NHF V P+ + HYD+D+KP+ RP +++
Sbjct: 10 ASLFQPPRRP-GLGTVG-KPIRLLANHFQVQI-PKIDVYHYDVDIKPE-----KRPRRVN 61
Query: 177 KTVL-AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYR 232
+ V+ +VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +
Sbjct: 62 REVVDTMVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQ 116
Query: 233 TYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVE 291
T+ +++ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E
Sbjct: 117 TFKVSVQWVSVVSLQLLLEALAGHLSEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPE 176
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINF 346
+ LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 177 GYYHP-LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINE 235
Query: 347 DVNGFRDWRKVE--NALKGLK 365
D ++V+ ++GLK
Sbjct: 236 QTKPLTDSQRVKFTKEIRGLK 256
Score = 136 (52.9 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 910 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 952
>TAIR|locus:2170897 [details] [associations]
symbol:AGO10 "ARGONAUTE 10" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;ISS] [GO:0035019 "somatic stem
cell maintenance" evidence=IMP] [GO:0010586 "miRNA metabolic
process" evidence=IMP] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010050
"vegetative phase change" evidence=RCA] [GO:0010051 "xylem and
phloem pattern formation" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
UniProt:Q9XGW1 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006417 GO:GO:0006355 GO:GO:0006351 GO:GO:0030529
SUPFAM:SSF53098 EMBL:AF154272 EMBL:AJ223508 EMBL:AB026651
IPI:IPI00539560 PIR:T52134 RefSeq:NP_001190464.1 RefSeq:NP_199194.1
UniGene:At.11438 ProteinModelPortal:Q9XGW1 SMR:Q9XGW1 STRING:Q9XGW1
PaxDb:Q9XGW1 PRIDE:Q9XGW1 EnsemblPlants:AT5G43810.1
EnsemblPlants:AT5G43810.2 GeneID:834403 KEGG:ath:AT5G43810
TAIR:At5g43810 eggNOG:NOG279895 HOGENOM:HOG000116043
InParanoid:Q9XGW1 KO:K11593 OMA:ENDILRT PhylomeDB:Q9XGW1
ProtClustDB:CLSN2686847 Genevestigator:Q9XGW1 GermOnline:AT5G43810
GO:GO:0035198 GO:GO:0031047 GO:GO:0048366 GO:GO:0010586
GO:GO:0035019 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
Length = 988
Score = 253 (94.1 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 77/254 (30%), Positives = 129/254 (50%)
Query: 125 RPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLA-IV 183
RP G GTL + + + NHF + P + YD+ + P++ +++ ++A +V
Sbjct: 131 RP-GFGTLGTKCI-VKANHFLADL-PTKDLNQYDVTITPEVSSK-----SVNRAIIAELV 182
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP-TGK-FNVEFPEGED------MKYRTYV 235
R D + P AYDG K++++A ELP T K F+V+ + +D + R+Y
Sbjct: 183 RLYKESDLGRRLP----AYDGRKSLYTAGELPFTWKEFSVKIVDEDDGIINGPKRERSYK 238
Query: 236 FTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPD 295
IK V + L E+L G P++ +Q +D+V++E +R VGRSF +
Sbjct: 239 VAIKFVARANMHHLGEFLAGKRADCPQEAVQILDIVLRELSVKRFCPVGRSFFSPDIKTP 298
Query: 296 DDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGF---- 351
LG GL + GF ++ T GL+L +D + AF + LPVI+F+ + + DV
Sbjct: 299 QRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLLGKDVLSKPLSD 358
Query: 352 RDWRKVENALKGLK 365
D K++ L+G+K
Sbjct: 359 SDRVKIKKGLRGVK 372
Score = 153 (58.9 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 365 KHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHE 412
++ FT+D +Q L N+C+T+ARCT+ VS+VPP YYA L A+R R Y E
Sbjct: 899 ENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYLE 946
>TAIR|locus:2007111 [details] [associations]
symbol:AGO7 "ARGONAUTE7" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0016246 "RNA
interference" evidence=IEP] [GO:0035195 "gene silencing by miRNA"
evidence=TAS] [GO:0040034 "regulation of development,
heterochronic" evidence=IMP] [GO:0010050 "vegetative phase change"
evidence=IMP] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=IMP] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=IMP] [GO:0010599
"production of lsiRNA involved in RNA interference" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0006952 GO:GO:0006417 GO:GO:0006355
GO:GO:0006351 GO:GO:0003723 GO:GO:0030529 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AC073178 EMBL:AY394564
IPI:IPI00543975 RefSeq:NP_177103.1 UniGene:At.35421
ProteinModelPortal:Q9C793 SMR:Q9C793 STRING:Q9C793
EnsemblPlants:AT1G69440.1 GeneID:843276 KEGG:ath:AT1G69440
TAIR:At1g69440 InParanoid:Q9C793 OMA:YSPVEFQ PhylomeDB:Q9C793
ProtClustDB:CLSN2682549 Genevestigator:Q9C793 GO:GO:0035195
GO:GO:0010492 GO:GO:0010599 GO:GO:0010267 GO:GO:0040034
GO:GO:0010050 Uniprot:Q9C793
Length = 990
Score = 233 (87.1 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 74/260 (28%), Positives = 124/260 (47%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
KRPD GG + + NHF V F I HY++++ P R +K + ++
Sbjct: 152 KRPDFGGQDG-SVIYLLANHFLVKFDSSQRIYHYNVEISPQPSKEIARMIK--QKLVETD 208
Query: 184 RNKLCEDYP--D--QFPLSMTAYDGEK-NIFSAIELPTGK--FNV-EFPEGEDMKYRTYV 235
RN P D Q S + G++ F + +P+ K N + E + K +
Sbjct: 209 RNSFSGVVPAFDGRQNIYSPVEFQGDRLEFFVNLPIPSCKAVMNYGDLREKQPQKKIEKL 268
Query: 236 FTIKLVNELKLCKLKEYLTGSLFS-IPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFP 294
F + + K ++ G ++ +P + + +DV+++ENP + S+GRSF+
Sbjct: 269 FRVNMKLVSKFDGKEQRKEGEDWAPLPPEYIHALDVILRENPMEKCTSIGRSFYSSSMGG 328
Query: 295 DDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF--DV--NG 350
++G G RGF L+ T QGLAL +D S+ AF + + VI +LQ+ + F D+ N
Sbjct: 329 SKEIGGGAVGLRGFFQSLRHTQQGLALNMDLSITAFHESIGVIAYLQKRLEFLTDLPRNK 388
Query: 351 FRDW-----RKVENALKGLK 365
R+ R+VE ALK ++
Sbjct: 389 GRELSLEEKREVEKALKNIR 408
Score = 199 (75.1 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVME 416
FTSD+LQ+L+YN+C+TF RCTKP+S+VPP YYA L AYRGRLY E E
Sbjct: 906 FTSDELQRLVYNLCYTFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSE 954
>UNIPROTKB|F1NL39 [details] [associations]
symbol:LOC100858102 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0005845 "mRNA cap binding complex"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=IEA]
[GO:0035197 "siRNA binding" evidence=IEA] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0045947
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0000932 GO:GO:0005844 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0035197 GO:GO:0005845
GO:GO:0016442 GO:GO:0070551 GO:GO:0000340 GO:GO:0035279
GO:GO:0031054 OMA:AIKWMSC EMBL:AADN02037477 EMBL:AADN02037478
IPI:IPI00572529 Ensembl:ENSGALT00000026092 Uniprot:F1NL39
Length = 856
Score = 260 (96.6 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 83/271 (30%), Positives = 135/271 (49%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+ P RPD G + RT+ + N F ++ P+ I HY++D+KP+ P R V + V
Sbjct: 20 FKPPPRPDFG--TSGRTIKLQANFFEMDI-PKIDIYHYELDIKPEKCP---RRVN-REIV 72
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP--TGKFNVEFPEGEDMKYRTYVFT 237
+V++ + + D+ P+ +DG KN+++ + LP T K +E + K R +
Sbjct: 73 EHMVQHFKTQIFGDRKPV----FDGRKNLYTVMALPIVTDKVELEVTLPGEGKDRIFKVA 128
Query: 238 IKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDD 297
IK ++ + L L + L+G L S+P + +Q +DVVM+ PS R VGRSF +
Sbjct: 129 IKWMSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNP 188
Query: 298 LGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-----DVNGFR 352
LG G GF ++ + + L +D S AF K PVI+F+ E ++F
Sbjct: 189 LGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLT 248
Query: 353 DWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T K Y +C
Sbjct: 249 DSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 279
Score = 135 (52.6 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 771 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 813
>UNIPROTKB|Q6DJB9 [details] [associations]
symbol:eif2c2 "Protein argonaute-2" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000340 "RNA 7-methylguanosine cap
binding" evidence=ISS] [GO:0005845 "mRNA cap binding complex"
evidence=ISS] [GO:0016442 "RNA-induced silencing complex"
evidence=ISS] [GO:0031054 "pre-miRNA processing" evidence=ISS]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=ISS]
[GO:0035197 "siRNA binding" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0045947 "negative regulation of
translational initiation" evidence=ISS] [GO:0070551
"endoribonuclease activity, cleaving siRNA-paired mRNA"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0046872
GO:GO:0045947 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068 GO:GO:0035278
GO:GO:0035197 CTD:27161 GO:GO:0005845 GO:GO:0016442 GO:GO:0070551
GO:GO:0000340 GO:GO:0035279 GO:GO:0031054 HSSP:Q9UL18 EMBL:BC075263
RefSeq:NP_001004877.1 UniGene:Str.65293 ProteinModelPortal:Q6DJB9
SMR:Q6DJB9 STRING:Q6DJB9 GeneID:448205 KEGG:xtr:448205
Xenbase:XB-GENE-1001916 InParanoid:Q6DJB9 Bgee:Q6DJB9
Uniprot:Q6DJB9
Length = 871
Score = 259 (96.2 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 88/278 (31%), Positives = 137/278 (49%)
Query: 117 AARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLS 176
A + P RPD G T RT+ + N F ++ P+ I HY+ID+KP+ P R V
Sbjct: 22 AYTFKPPPRPDFG-TSG-RTIKLQANFFEMDI-PKIEIYHYEIDIKPEKCP---RRVN-R 74
Query: 177 KTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGK-----FNVEFP-EGEDMK 230
+ V +V++ + + D+ P+ +DG KN+++A+ LP + V P EG+D
Sbjct: 75 EIVEHMVQHFKAQIFGDRKPV----FDGRKNLYTAMPLPIARDKQVELEVTLPGEGKD-- 128
Query: 231 YRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPV 290
R + IK + + L L + L+G L S+P + +Q +DVVM+ PS R VGRSF
Sbjct: 129 -RIFKVAIKWMACVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTA 187
Query: 291 EPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF---- 346
+ LG G GF ++ + + L +D S AF K PVI+F+ E ++F
Sbjct: 188 SEGCANPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFMCEVLDFKSIE 247
Query: 347 -DVNGFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T K Y +C
Sbjct: 248 EQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 285
Score = 135 (52.6 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 786 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 828
>UNIPROTKB|Q6DCX2 [details] [associations]
symbol:eif2c2 "Protein argonaute-2" species:8355 "Xenopus
laevis" [GO:0000340 "RNA 7-methylguanosine cap binding"
evidence=ISS] [GO:0005845 "mRNA cap binding complex" evidence=ISS]
[GO:0016442 "RNA-induced silencing complex" evidence=ISS]
[GO:0031054 "pre-miRNA processing" evidence=ISS] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISS] [GO:0035197 "siRNA
binding" evidence=ISS] [GO:0035278 "negative regulation of
translation involved in gene silencing by miRNA" evidence=ISS]
[GO:0035279 "mRNA cleavage involved in gene silencing by miRNA"
evidence=ISS] [GO:0045947 "negative regulation of translational
initiation" evidence=ISS] [GO:0070551 "endoribonuclease activity,
cleaving siRNA-paired mRNA" evidence=ISS] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0046872 GO:GO:0045947 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932
GO:GO:0035068 GO:GO:0035278 GO:GO:0035197 CTD:27161 GO:GO:0005845
GO:GO:0016442 GO:GO:0070551 GO:GO:0000340 GO:GO:0035279
GO:GO:0031054 EMBL:BC077863 RefSeq:NP_001086988.1 UniGene:Xl.43287
HSSP:Q9UL18 ProteinModelPortal:Q6DCX2 SMR:Q6DCX2 GeneID:446823
KEGG:xla:446823 Xenbase:XB-GENE-1001922 Uniprot:Q6DCX2
Length = 862
Score = 257 (95.5 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 88/278 (31%), Positives = 137/278 (49%)
Query: 117 AARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLS 176
A + P RPD G T RT+ + N F ++ P+ I HYDID+KP+ P R V
Sbjct: 22 AYTFKPPPRPDFG-TSG-RTIKLQANVFEMDI-PKIEIYHYDIDIKPEKCP---RRVN-R 74
Query: 177 KTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGK-----FNVEFP-EGEDMK 230
+ V +V++ + + D+ P+ +DG KN+++A+ LP + V P EG+D
Sbjct: 75 EIVEHMVQHFKAQIFGDRKPV----FDGRKNLYTAMPLPIARDKQVELEVTLPGEGKD-- 128
Query: 231 YRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPV 290
R + IK + + L L + L+G L ++P + +Q +DVVM+ PS R VGRSF
Sbjct: 129 -RIFKVAIKWMACVSLQALHDALSGRLPNVPFETVQALDVVMRHLPSMRYTPVGRSFFTA 187
Query: 291 EPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF---- 346
+ LG G GF ++ + + L +D S AF K PVI+F+ E ++F
Sbjct: 188 SEGCANPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFMCEVLDFKSIE 247
Query: 347 -DVNGFRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T K Y +C
Sbjct: 248 EQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVC 285
Score = 135 (52.6 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 777 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 819
>UNIPROTKB|Q75HC2 [details] [associations]
symbol:AGO7 "Protein argonaute 7" species:39947 "Oryza
sativa Japonica Group" [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0016246
GO:GO:0003676 EMBL:DP000009 EMBL:AP008209 SUPFAM:SSF53098
eggNOG:NOG279895 KO:K11593 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 HSSP:Q9UL18 OMA:YSPVEFQ ProtClustDB:CLSN2682549
GO:GO:0010492 GO:GO:0010599 GO:GO:0010267 GO:GO:0040034
GO:GO:0010050 EMBL:EF486281 EMBL:AB353924 EMBL:AC135597
RefSeq:NP_001050473.2 UniGene:Os.75048
EnsemblPlants:LOC_Os03g33650.1 GeneID:4333232
KEGG:dosa:Os03t0449200-00 KEGG:osa:4333232 Gramene:Q75HC2
Uniprot:Q75HC2
Length = 1048
Score = 216 (81.1 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 79/265 (29%), Positives = 119/265 (44%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RPD GG + + NHF V F P I HY++D+ P R +K K ++
Sbjct: 196 RRPDMGGVEGAE-IPLSANHFLVQFDPGQKIFHYNVDISPRPSKETARMIK--KKLVEEN 252
Query: 184 RNKLCEDYPDQFPLSMTAYDG----EKNIFSAIELPTGKFN---VEFPEG---EDMKYRT 233
+ L P F Y E + + LP V+ G + K +T
Sbjct: 253 PSVLSGSQP-AFDGRKNLYSPVRFQEDRVEFFVSLPVALARCSVVKEDTGHMLDKQKLKT 311
Query: 234 YVFTIKLVNELKLC--KLKEYLTGSLFSIP--RDILQGMDVVMKENPSRRMISVGRSFHP 289
+ ++LV+ KLC L +YL IP +D L +DVV++E I VGRS +
Sbjct: 312 FKVNVRLVS--KLCGEDLNKYLNEDKDGIPLPQDYLHALDVVLREGAMESSILVGRSLYA 369
Query: 290 VEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF--D 347
D+G G RGF L+ T QGLAL +D S+ AF + +I +LQ+ +F D
Sbjct: 370 RSMGEARDIGGGAVGLRGFFQRLRPTKQGLALNVDLSLSAFHESTGIISYLQKRCDFLKD 429
Query: 348 VNGFR-------DWRKVENALKGLK 365
+ + + R+VE ALK ++
Sbjct: 430 LPQKKTRALAEEEHREVEKALKNIR 454
Score = 190 (71.9 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 365 KHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHE 412
++ F SD++Q+LI+N+C+TFARCT+PVSLVPP YYA L AYRGRLY E
Sbjct: 970 ENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAYYAHLAAYRGRLYLE 1017
Score = 51 (23.0 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 332 KRLPVIDFLQEHINFDVNGFRD 353
K L V+D+ +EH N D+ FR+
Sbjct: 487 KDLMVVDYFKEHYNHDIQ-FRN 507
Score = 45 (20.9 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP 215
++ + + YP PL + G +I A+ LP
Sbjct: 53 QHPIIQAYPALLPLPINGATGHAHINGAVSLP 84
>UNIPROTKB|F1PQZ7 [details] [associations]
symbol:EIF2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:AAEX03008878
Ensembl:ENSCAFT00000001857 OMA:CQRPREQ Uniprot:F1PQZ7
Length = 813
Score = 248 (92.4 bits), Expect = 8.1e-30, Sum P(2) = 8.1e-30
Identities = 78/242 (32%), Positives = 123/242 (50%)
Query: 150 PESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIF 209
P+ I HY++D+KP+ P R V + V +V++ + + D+ P+ +DG KN++
Sbjct: 4 PKIDIYHYELDIKPEKCP---RRVN-REIVEHMVQHFKTQIFGDRKPV----FDGRKNLY 55
Query: 210 SAIELPTGKFNVEFP---EGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQ 266
+A+ LP G+ VE GE K R + +IK V+ + L L + L+G L S+P + +Q
Sbjct: 56 TAMPLPIGRDKVELEVTLPGEG-KDRIFKVSIKWVSCVSLQALHDALSGRLPSVPFETIQ 114
Query: 267 GMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYS 326
+DVVM+ PS R VGRSF + LG G GF ++ + + L +D S
Sbjct: 115 ALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVS 174
Query: 327 VLAFRKRLPVIDFLQEHINF-----DVNGFRDWRKVE--NALKGLKHGFTSDQLQKLIYN 379
AF K PVI+F+ E ++F D ++V+ +KGLK T K Y
Sbjct: 175 ATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYR 234
Query: 380 MC 381
+C
Sbjct: 235 VC 236
Score = 135 (52.6 bits), Expect = 8.1e-30, Sum P(2) = 8.1e-30
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
F+SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 728 FSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 770
>FB|FBgn0262739 [details] [associations]
symbol:AGO1 "Argonaute-1" species:7227 "Drosophila
melanogaster" [GO:0005850 "eukaryotic translation initiation factor
2 complex" evidence=ISS] [GO:0016442 "RNA-induced silencing
complex" evidence=ISS] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0030422 "production of siRNA involved
in RNA interference" evidence=IMP] [GO:0030423 "targeting of mRNA
for destruction involved in RNA interference" evidence=IMP]
[GO:0016246 "RNA interference" evidence=TAS] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IDA;IMP]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0035195 "gene silencing by miRNA" evidence=IMP;NAS] [GO:0007416
"synapse assembly" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=IMP] [GO:0007367 "segment polarity
determination" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006402 "mRNA catabolic process"
evidence=IGI;IMP] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0036099 "female germ-line stem cell maintenance" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IMP] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 EMBL:AE013599
GO:GO:0005634 GO:GO:0048471 GO:GO:0007294 GO:GO:0007416
GO:GO:0030529 SUPFAM:SSF53098 GO:GO:0006342 KO:K11593 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OMA:NNLVKRA
ChiTaRS:EIF2C1 GO:GO:0035279 GeneTree:ENSGT00640000091312
GO:GO:0030422 GO:GO:0007367 GO:GO:0030423 GO:GO:0006402
GO:GO:0030727 GO:GO:0035196 GO:GO:0036099 FlyBase:FBgn0262739
EMBL:BT023945 EMBL:BT125895 RefSeq:NP_001246314.1
RefSeq:NP_725341.1 RefSeq:NP_725342.1 UniGene:Dm.7398 PDB:1R4K
PDBsum:1R4K SMR:Q32KD4 DIP:DIP-59685N IntAct:Q32KD4 STRING:Q32KD4
EnsemblMetazoa:FBtr0087612 EnsemblMetazoa:FBtr0087613
EnsemblMetazoa:FBtr0305592 GeneID:36544 KEGG:dme:Dmel_CG6671
UCSC:CG6671-RA CTD:36544 InParanoid:Q32KD4 EvolutionaryTrace:Q32KD4
GenomeRNAi:36544 NextBio:799120 Uniprot:Q32KD4
Length = 984
Score = 245 (91.3 bits), Expect = 9.7e-29, Sum P(2) = 9.7e-29
Identities = 83/274 (30%), Positives = 127/274 (46%)
Query: 120 YTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
+T +RP+ G R + + NHF V P + HYDI+++PD P K+++ +
Sbjct: 133 FTCPRRPNLGREG--RPIVLRANHFQVTM-PRGYVHHYDINIQPDKCPR-----KVNREI 184
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTG----KFNVEFP-EGEDMKYRTY 234
+ + Y F + +DG N+++ LP G + V P EG+D +R
Sbjct: 185 I----ETMVHAYSKIFGVLKPVFDGRNNLYTRDPLPIGNERLELEVTLPGEGKDRIFRV- 239
Query: 235 VFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFP 294
TIK ++ L L+E L G IP D + +DVVM+ PS VGRSF
Sbjct: 240 --TIKWQAQVSLFNLEEALEGRTRQIPYDAILALDVVMRHLPSMTYTPVGRSFFSSPEGY 297
Query: 295 DDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-DVNGFR- 352
LG G GF ++ + + L +D S AF K PVIDF+ E ++ D+N R
Sbjct: 298 YHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIDFMCEVLDIRDINEQRK 357
Query: 353 ---DWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ +KGLK T + Y +C
Sbjct: 358 PLTDSQRVKFTKEIKGLKIEITHCGQMRRKYRVC 391
Score = 134 (52.2 bits), Expect = 9.7e-29, Sum P(2) = 9.7e-29
Identities = 32/91 (35%), Positives = 44/91 (48%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVMEGQXXXXXXXXX 427
F SD+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH ++E +
Sbjct: 899 FDSDELQCLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH--LVEKEHDSGEGSHQ 955
Query: 428 XXXXXXXXXXXXXFDERFYKLHTDLENMMYF 458
R +H D + +MYF
Sbjct: 956 SGCSEDRTPGAMA---RAITVHADTKKVMYF 983
>UNIPROTKB|F1MXX2 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OMA:NNLVKRA GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 EMBL:DAAA02009205
IPI:IPI00686174 Ensembl:ENSBTAT00000016254 Uniprot:F1MXX2
Length = 877
Score = 239 (89.2 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 84/269 (31%), Positives = 129/269 (47%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N+F V+ P+ + HY++D+KPD P R V + V +V
Sbjct: 45 RRP-GIGTVG-KPIKLLANYFEVDI-PKIDVYHYEVDIKPDKCP---RRVN-REVVEYMV 97
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTIKL 240
++ + + D+ P+ YDG+KNI++ LP G V+F GE K R + +IK
Sbjct: 98 QHFKPQIFGDRKPV----YDGKKNIYTVTALPIGNERVDFEVTIPGEG-KDRIFKVSIKW 152
Query: 241 VNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDDLG 299
+ + L E L +P + +Q +DV M+ S R VGRSF P E + LG
Sbjct: 153 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP-LG 211
Query: 300 YGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDVN--GFRDW 354
G GF ++ + L +D S AF K PVI+F+ E + N D D
Sbjct: 212 GGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKALTDS 271
Query: 355 RKVE--NALKGLKHGFTSDQLQKLIYNMC 381
++V +KGLK T K Y +C
Sbjct: 272 QRVRFTKEIKGLKVEVTHCGQMKRKYRVC 300
Score = 135 (52.6 bits), Expect = 7.6e-28, Sum P(2) = 7.6e-28
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 792 FTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 834
>WB|WBGene00000106 [details] [associations]
symbol:alg-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009790 "embryo development" evidence=IGI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0035198 "miRNA binding"
evidence=IPI] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IPI] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0035068
GeneTree:ENSGT00640000091312 EMBL:FO081675 CTD:3355106
RefSeq:NP_871992.1 ProteinModelPortal:O16720 SMR:O16720
IntAct:O16720 STRING:O16720 PaxDb:O16720 EnsemblMetazoa:T07D3.7a
GeneID:173468 KEGG:cel:CELE_T07D3.7 UCSC:T07D3.7a WormBase:T07D3.7a
InParanoid:O16720 OMA:YWACINF NextBio:879789 ArrayExpress:O16720
Uniprot:O16720
Length = 910
Score = 234 (87.4 bits), Expect = 9.0e-28, Sum P(2) = 9.0e-28
Identities = 74/280 (26%), Positives = 136/280 (48%)
Query: 122 PIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLA 181
P+ RP+ G + R++ + NHF V P +++HY IDV PD P ++++ V+
Sbjct: 65 PV-RPNHG--VEGRSILLRANHFAVRI-PGGSVQHYQIDVFPDKCPR-----RVNREVIG 115
Query: 182 IVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTG----KFNVEFPEGEDMKYRTYVFT 237
+ + + + + P+ YDG++N+++ LP G F V P G+ R + T
Sbjct: 116 CLISSFSKYFTNIRPV----YDGKRNMYTREPLPIGTEPMNFEVTLP-GDSAVERKFSVT 170
Query: 238 IKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-P---VEP- 292
+K + ++ L L + + G + +P + +Q +DV+++ PS + VGRSF P ++P
Sbjct: 171 MKWIGQVCLSALDDAMEGRVRQVPHEAVQSIDVILRHLPSLKYTPVGRSFFTPPGVMKPG 230
Query: 293 ---FPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVN 349
+ LG G GF ++ + + L +D S AF + +PVI+F+ E + V
Sbjct: 231 MQMHQESKLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYRAMPVIEFVAEVLELPVQ 290
Query: 350 GFRDWRKVENA--------LKGLKHGFTSDQLQKLIYNMC 381
+ R + +A ++GLK T + Y +C
Sbjct: 291 ALAERRALSDAQRVKFTKEIRGLKIEITHCGAVRRKYRVC 330
Score = 142 (55.0 bits), Expect = 9.0e-28, Sum P(2) = 9.0e-28
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 369 TSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVMEGQXXXXXXXXXX 428
T+D+LQ+L Y MC T+ RCT+ VS+ P YYA LVA+R R YH +++
Sbjct: 824 TADELQQLTYQMCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH--LVDRDHGSGEEGSQP 880
Query: 429 XXXXXXXXXXXXFDERFYKLHTDLENMMYF 458
+ ++H D N+MYF
Sbjct: 881 SGTSSEDTTLSSM-AKAVQVHPDSNNVMYF 909
>UNIPROTKB|F1P3Y9 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005844 "polysome" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OMA:NNLVKRA GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 EMBL:AADN02043843
EMBL:AADN02043844 IPI:IPI00597606 Ensembl:ENSGALT00000003529
Uniprot:F1P3Y9
Length = 853
Score = 238 (88.8 bits), Expect = 9.8e-28, Sum P(2) = 9.8e-28
Identities = 85/272 (31%), Positives = 130/272 (47%)
Query: 121 TPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVL 180
T +RP G GT+ + + + N+F V+ P+ + HY++D+KPD P R V + V
Sbjct: 16 TAPRRP-GIGTVG-KPIKLLANYFEVDI-PKIDVYHYEVDIKPDKCP---RRVN-REVVE 68
Query: 181 AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFT 237
+V++ + + D+ P+ YDG+KNI++ LP G V+F GE K R + +
Sbjct: 69 YMVQHFKPQIFGDRKPV----YDGKKNIYTVTALPIGNERVDFEVTIPGEG-KDRIFKVS 123
Query: 238 IKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDD 296
IK + + L E L +P + +Q +DV M+ S R VGRSF P E +
Sbjct: 124 IKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP 183
Query: 297 DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDVNG--F 351
LG G GF ++ + L +D S AF K PVI+F+ E + N D
Sbjct: 184 -LGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPL 242
Query: 352 RDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V +KGLK T K Y +C
Sbjct: 243 TDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVC 274
Score = 135 (52.6 bits), Expect = 9.8e-28, Sum P(2) = 9.8e-28
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 766 FTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 808
>UNIPROTKB|F1PGP5 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 CTD:26523
GeneTree:ENSGT00640000091310 EMBL:AAEX03009640 EMBL:AAEX03009639
RefSeq:XP_532563.3 ProteinModelPortal:F1PGP5
Ensembl:ENSCAFT00000005625 GeneID:475337 KEGG:cfa:475337
OMA:XGEGSHI Uniprot:F1PGP5
Length = 857
Score = 237 (88.5 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 84/269 (31%), Positives = 129/269 (47%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N+F V+ P+ + HY++D+KPD P R V + V +V
Sbjct: 25 RRP-GIGTVG-KPIKLLANYFEVDI-PKIDVYHYEVDIKPDKCP---RRVN-REVVEYMV 77
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTIKL 240
++ + + D+ P+ YDG+KNI++ LP G V+F GE K R + +IK
Sbjct: 78 QHFKPQIFGDRKPV----YDGKKNIYTVTALPIGNERVDFEVTIPGEG-KDRIFKVSIKW 132
Query: 241 VNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDDLG 299
+ + L E L +P + +Q +DV M+ S R VGRSF P E + LG
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP-LG 191
Query: 300 YGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDVNG--FRDW 354
G GF ++ + L +D S AF K PVI+F+ E + N D D
Sbjct: 192 GGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDS 251
Query: 355 RKVE--NALKGLKHGFTSDQLQKLIYNMC 381
++V +KGLK T K Y +C
Sbjct: 252 QRVRFTKEIKGLKVEVTHCGQMKRKYRVC 280
Score = 135 (52.6 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 772 FTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 814
>UNIPROTKB|Q9UL18 [details] [associations]
symbol:EIF2C1 "Protein argonaute-1" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=IDA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005844 "polysome" evidence=IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0010467
GO:GO:0006355 GO:GO:0007219 GO:GO:0006351 GO:GO:0003723
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:AF093097
EMBL:AL139286 EMBL:BC063275 IPI:IPI00007736 RefSeq:NP_036331.1
UniGene:Hs.22867 PDB:1SI2 PDB:1SI3 PDBsum:1SI2 PDBsum:1SI3
ProteinModelPortal:Q9UL18 SMR:Q9UL18 DIP:DIP-29193N IntAct:Q9UL18
STRING:Q9UL18 PhosphoSite:Q9UL18 DMDM:88984241 PaxDb:Q9UL18
PRIDE:Q9UL18 Ensembl:ENST00000373204 GeneID:26523 KEGG:hsa:26523
UCSC:uc001bzk.3 CTD:26523 GeneCards:GC01P036335 HGNC:HGNC:3262
MIM:606228 neXtProt:NX_Q9UL18 PharmGKB:PA27693 InParanoid:Q9UL18
OMA:NNLVKRA OrthoDB:EOG4229J0 PhylomeDB:Q9UL18 ChiTaRS:EIF2C1
EvolutionaryTrace:Q9UL18 GenomeRNAi:26523 NextBio:48846
ArrayExpress:Q9UL18 Bgee:Q9UL18 CleanEx:HS_EIF2C1
Genevestigator:Q9UL18 GermOnline:ENSG00000092847 GO:GO:0000932
GO:GO:0035068 GO:GO:0005844 GO:GO:0035278 GO:GO:0000956
Uniprot:Q9UL18
Length = 857
Score = 237 (88.5 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 84/269 (31%), Positives = 129/269 (47%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N+F V+ P+ + HY++D+KPD P R V + V +V
Sbjct: 25 RRP-GIGTVG-KPIKLLANYFEVDI-PKIDVYHYEVDIKPDKCP---RRVN-REVVEYMV 77
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTIKL 240
++ + + D+ P+ YDG+KNI++ LP G V+F GE K R + +IK
Sbjct: 78 QHFKPQIFGDRKPV----YDGKKNIYTVTALPIGNERVDFEVTIPGEG-KDRIFKVSIKW 132
Query: 241 VNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDDLG 299
+ + L E L +P + +Q +DV M+ S R VGRSF P E + LG
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP-LG 191
Query: 300 YGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDVNG--FRDW 354
G GF ++ + L +D S AF K PVI+F+ E + N D D
Sbjct: 192 GGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDS 251
Query: 355 RKVE--NALKGLKHGFTSDQLQKLIYNMC 381
++V +KGLK T K Y +C
Sbjct: 252 QRVRFTKEIKGLKVEVTHCGQMKRKYRVC 280
Score = 135 (52.6 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 772 FTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 814
>UNIPROTKB|F1SV63 [details] [associations]
symbol:EIF2C1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0005844
"polysome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005737
GO:GO:0003723 SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0005844 GO:GO:0035278 GO:GO:0000956
GeneTree:ENSGT00640000091310 OMA:XGEGSHI EMBL:AEMK01190523
EMBL:CU929817 ProteinModelPortal:F1SV63 SMR:F1SV63 PRIDE:F1SV63
Ensembl:ENSSSCT00000004026 Uniprot:F1SV63
Length = 857
Score = 237 (88.5 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 84/269 (31%), Positives = 129/269 (47%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N+F V+ P+ + HY++D+KPD P R V + V +V
Sbjct: 25 RRP-GIGTVG-KPIKLLANYFEVDI-PKIDVYHYEVDIKPDKCP---RRVN-REVVEYMV 77
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTIKL 240
++ + + D+ P+ YDG+KNI++ LP G V+F GE K R + +IK
Sbjct: 78 QHFKPQIFGDRKPV----YDGKKNIYTVTALPIGNERVDFEVTIPGEG-KDRIFKVSIKW 132
Query: 241 VNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDDLG 299
+ + L E L +P + +Q +DV M+ S R VGRSF P E + LG
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP-LG 191
Query: 300 YGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDVNG--FRDW 354
G GF ++ + L +D S AF K PVI+F+ E + N D D
Sbjct: 192 GGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDS 251
Query: 355 RKVE--NALKGLKHGFTSDQLQKLIYNMC 381
++V +KGLK T K Y +C
Sbjct: 252 QRVRFTKEIKGLKVEVTHCGQMKRKYRVC 280
Score = 135 (52.6 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 772 FTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 814
>MGI|MGI:2446630 [details] [associations]
symbol:Ago1 "argonaute RISC catalytic subunit 1"
species:10090 "Mus musculus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005844 "polysome" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=ISO;IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446630
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 CTD:26523 OMA:NNLVKRA
OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068 GO:GO:0005844
GO:GO:0035278 GO:GO:0000956 EMBL:AB081471 EMBL:AL606935
EMBL:AL606976 EMBL:BC129914 IPI:IPI00943422 RefSeq:NP_700452.2
UniGene:Mm.30800 ProteinModelPortal:Q8CJG1 SMR:Q8CJG1 IntAct:Q8CJG1
STRING:Q8CJG1 PhosphoSite:Q8CJG1 PaxDb:Q8CJG1 PRIDE:Q8CJG1
Ensembl:ENSMUST00000097888 GeneID:236511 KEGG:mmu:236511
GeneTree:ENSGT00640000091310 HOVERGEN:HBG006101 InParanoid:A1L365
NextBio:382987 Bgee:Q8CJG1 CleanEx:MM_EIF2C1 Genevestigator:Q8CJG1
Uniprot:Q8CJG1
Length = 857
Score = 237 (88.5 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 84/269 (31%), Positives = 129/269 (47%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N+F V+ P+ + HY++D+KPD P R V + V +V
Sbjct: 25 RRP-GIGTVG-KPIKLLANYFEVDI-PKIDVYHYEVDIKPDKCP---RRVN-REVVEYMV 77
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTIKL 240
++ + + D+ P+ YDG+KNI++ LP G V+F GE K R + +IK
Sbjct: 78 QHFKPQIFGDRKPV----YDGKKNIYTVTALPIGNERVDFEVTIPGEG-KDRIFKVSIKW 132
Query: 241 VNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDDLG 299
+ + L E L +P + +Q +DV M+ S R VGRSF P E + LG
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP-LG 191
Query: 300 YGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDVNG--FRDW 354
G GF ++ + L +D S AF K PVI+F+ E + N D D
Sbjct: 192 GGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDS 251
Query: 355 RKVE--NALKGLKHGFTSDQLQKLIYNMC 381
++V +KGLK T K Y +C
Sbjct: 252 QRVRFTKEIKGLKVEVTHCGQMKRKYRVC 280
Score = 135 (52.6 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 772 FTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 814
>RGD|1304619 [details] [associations]
symbol:Ago1 "argonaute RISC catalytic component 1" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005844 "polysome" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA;ISO] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA;ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 RGD:1304619
GO:GO:0005737 GO:GO:0003723 SUPFAM:SSF53098 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 CTD:26523
OMA:NNLVKRA OrthoDB:EOG4229J0 GO:GO:0005844 GO:GO:0035278
GO:GO:0000956 GeneTree:ENSGT00640000091310 IPI:IPI00359345
RefSeq:NP_001178694.1 UniGene:Rn.62413 Ensembl:ENSRNOT00000037728
GeneID:313594 KEGG:rno:313594 UCSC:RGD:1304619 NextBio:666514
Uniprot:D4AC38
Length = 857
Score = 237 (88.5 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 84/269 (31%), Positives = 129/269 (47%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N+F V+ P+ + HY++D+KPD P R V + V +V
Sbjct: 25 RRP-GIGTVG-KPIKLLANYFEVDI-PKIDVYHYEVDIKPDKCP---RRVN-REVVEYMV 77
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTIKL 240
++ + + D+ P+ YDG+KNI++ LP G V+F GE K R + +IK
Sbjct: 78 QHFKPQIFGDRKPV----YDGKKNIYTVTALPIGNERVDFEVTIPGEG-KDRIFKVSIKW 132
Query: 241 VNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDDLG 299
+ + L E L +P + +Q +DV M+ S R VGRSF P E + LG
Sbjct: 133 LAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP-LG 191
Query: 300 YGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDVNG--FRDW 354
G GF ++ + L +D S AF K PVI+F+ E + N D D
Sbjct: 192 GGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDS 251
Query: 355 RKVE--NALKGLKHGFTSDQLQKLIYNMC 381
++V +KGLK T K Y +C
Sbjct: 252 QRVRFTKEIKGLKVEVTHCGQMKRKYRVC 280
Score = 135 (52.6 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 772 FTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 814
>ZFIN|ZDB-GENE-060503-452 [details] [associations]
symbol:ago3b "argonaute RISC catalytic component
3b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 EMBL:JX448394
Uniprot:K4IKE9
Length = 867
Score = 219 (82.2 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 83/283 (29%), Positives = 131/283 (46%)
Query: 117 AARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLS 176
A +++ +RP G GT+ + + + N F V+ P+ + YD+D+KP+ P R V
Sbjct: 12 APQFSVPRRP-GYGTMG-KPIKLLANCFQVDI-PKMDVYLYDVDIKPEKCP---RRVN-R 64
Query: 177 KTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRT 233
+ V ++V++ + D+ P+ YDG+K++++A LP V+ GE K R
Sbjct: 65 EVVDSMVQHFKVTIFGDRRPV----YDGKKSLYTAQPLPVASAGVDLDVTLPGEGGKDRI 120
Query: 234 YVFTIKLVNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGR 285
+ TIK V+ + L E LTG P ++ + +DVV++ PS R VGR
Sbjct: 121 FKVTIKFVSLVSWHMLHEVLTGRSTPDPLELDKPISTNPVHAVDVVLRHLPSMRYTPVGR 180
Query: 286 SFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI- 344
SF D LG G GF ++ + L +D S AF K PVI F+ E +
Sbjct: 181 SFFSSPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD 240
Query: 345 --NFDVNG--FRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
N D D +V+ +KGLK T + Y +C
Sbjct: 241 IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVC 283
Score = 133 (51.9 bits), Expect = 8.7e-25, Sum P(2) = 8.7e-25
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+ Q L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 782 FTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 824
>UNIPROTKB|F1LZ24 [details] [associations]
symbol:Eif2c3 "Protein Eif2c3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1309163 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 IPI:IPI00388676
Ensembl:ENSRNOT00000037178 ArrayExpress:F1LZ24 Uniprot:F1LZ24
Length = 746
Score = 211 (79.3 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 81/277 (29%), Positives = 129/277 (46%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 9 RRP-GYGTMG-KPIKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 61
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP---TG-KFNVEFPEGEDMKYRTYVFTIK 239
++ + D+ P+ YDG++++++A LP TG +V P GE K R + ++K
Sbjct: 62 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDVTLP-GEGGKDRPFKVSVK 116
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGRSFHPVE 291
V+ + L E LTG P ++ + +DVV++ PS + VGRSF
Sbjct: 117 FVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAP 176
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDV 348
D LG G GF ++ + L +D S AF K PVI F+ E + N D
Sbjct: 177 EGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDE 236
Query: 349 NG--FRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D +V+ +KGLK T + Y +C
Sbjct: 237 QPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVC 273
Score = 137 (53.3 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 661 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 703
>UNIPROTKB|F1P3Z0 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 IPI:IPI00594029 OMA:GRSMPEP EMBL:AADN02043844
Ensembl:ENSGALT00000003527 Uniprot:F1P3Z0
Length = 860
Score = 212 (79.7 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 82/277 (29%), Positives = 129/277 (46%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 19 RRP-GYGTMG-KPIKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 71
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP---TG-KFNVEFPEGEDMKYRTYVFTIK 239
++ + D+ P+ YDG++++++A LP TG +V P GE K R + +IK
Sbjct: 72 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDVTLP-GEGGKDRPFKVSIK 126
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGRSFHPVE 291
V+ + L E LTG P ++ + +DVV++ PS + VGRSF
Sbjct: 127 FVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAP 186
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDV 348
D LG G GF ++ + L +D S AF K PVI F+ E + N D
Sbjct: 187 EGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDE 246
Query: 349 NG--FRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D +V+ +KGLK T + Y +C
Sbjct: 247 QPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVC 283
Score = 137 (53.3 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>UNIPROTKB|F1MG44 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
IPI:IPI00697621 GO:GO:0006402 OMA:IKLEAEY EMBL:DAAA02009205
ProteinModelPortal:F1MG44 Ensembl:ENSBTAT00000024385 Uniprot:F1MG44
Length = 860
Score = 212 (79.7 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 82/277 (29%), Positives = 129/277 (46%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 19 RRP-GYGTMG-KPIKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 71
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP---TG-KFNVEFPEGEDMKYRTYVFTIK 239
++ + D+ P+ YDG++++++A LP TG +V P GE K R + +IK
Sbjct: 72 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDVTLP-GEGGKDRPFKVSIK 126
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGRSFHPVE 291
V+ + L E LTG P ++ + +DVV++ PS + VGRSF
Sbjct: 127 FVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAP 186
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDV 348
D LG G GF ++ + L +D S AF K PVI F+ E + N D
Sbjct: 187 EGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDE 246
Query: 349 NG--FRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D +V+ +KGLK T + Y +C
Sbjct: 247 QPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVC 283
Score = 137 (53.3 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>UNIPROTKB|E2R0U1 [details] [associations]
symbol:EIF2C3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 OMA:GRSMPEP EMBL:AAEX03009638
Ensembl:ENSCAFT00000005611 Uniprot:E2R0U1
Length = 860
Score = 212 (79.7 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 82/277 (29%), Positives = 129/277 (46%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 19 RRP-GYGTMG-KPIKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 71
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP---TG-KFNVEFPEGEDMKYRTYVFTIK 239
++ + D+ P+ YDG++++++A LP TG +V P GE K R + +IK
Sbjct: 72 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDVTLP-GEGGKDRPFKVSIK 126
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGRSFHPVE 291
V+ + L E LTG P ++ + +DVV++ PS + VGRSF
Sbjct: 127 FVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAP 186
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDV 348
D LG G GF ++ + L +D S AF K PVI F+ E + N D
Sbjct: 187 EGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDE 246
Query: 349 NG--FRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D +V+ +KGLK T + Y +C
Sbjct: 247 QPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVC 283
Score = 137 (53.3 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>UNIPROTKB|Q9H9G7 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0010467 GO:GO:0007219 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035068 GO:GO:0035278 CTD:192669 GO:GO:0006402
EMBL:AK022827 EMBL:AL138787 EMBL:BC025769 IPI:IPI00304181
IPI:IPI00551009 RefSeq:NP_079128.2 RefSeq:NP_803171.1
UniGene:Hs.657659 ProteinModelPortal:Q9H9G7 SMR:Q9H9G7
DIP:DIP-54486N IntAct:Q9H9G7 STRING:Q9H9G7 PhosphoSite:Q9H9G7
DMDM:76803660 PaxDb:Q9H9G7 PRIDE:Q9H9G7 DNASU:192669
Ensembl:ENST00000246314 Ensembl:ENST00000373191 GeneID:192669
KEGG:hsa:192669 UCSC:uc001bzp.3 GeneCards:GC01P036396
HGNC:HGNC:18421 HPA:HPA048342 MIM:607355 neXtProt:NX_Q9H9G7
PharmGKB:PA38329 InParanoid:Q9H9G7 OMA:IKLEAEY PhylomeDB:Q9H9G7
ChiTaRS:EIF2C3 GenomeRNAi:192669 NextBio:89367 ArrayExpress:Q9H9G7
Bgee:Q9H9G7 CleanEx:HS_EIF2C3 Genevestigator:Q9H9G7
GermOnline:ENSG00000126070 Uniprot:Q9H9G7
Length = 860
Score = 212 (79.7 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 82/277 (29%), Positives = 129/277 (46%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 19 RRP-GYGTMG-KPIKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 71
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP---TG-KFNVEFPEGEDMKYRTYVFTIK 239
++ + D+ P+ YDG++++++A LP TG +V P GE K R + +IK
Sbjct: 72 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDVTLP-GEGGKDRPFKVSIK 126
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGRSFHPVE 291
V+ + L E LTG P ++ + +DVV++ PS + VGRSF
Sbjct: 127 FVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAP 186
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDV 348
D LG G GF ++ + L +D S AF K PVI F+ E + N D
Sbjct: 187 EGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDE 246
Query: 349 NG--FRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D +V+ +KGLK T + Y +C
Sbjct: 247 QPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVC 283
Score = 137 (53.3 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>UNIPROTKB|F1LUS2 [details] [associations]
symbol:Eif2c3 "Protein Eif2c3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 RGD:1309163 GO:GO:0003723
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035068 GO:GO:0035278 GeneTree:ENSGT00640000091310
GO:GO:0006402 OMA:IKLEAEY IPI:IPI00359343
Ensembl:ENSRNOT00000042371 ArrayExpress:F1LUS2 Uniprot:F1LUS2
Length = 854
Score = 211 (79.3 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 81/277 (29%), Positives = 129/277 (46%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 13 RRP-GYGTMG-KPIKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 65
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP---TG-KFNVEFPEGEDMKYRTYVFTIK 239
++ + D+ P+ YDG++++++A LP TG +V P GE K R + ++K
Sbjct: 66 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDVTLP-GEGGKDRPFKVSVK 120
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGRSFHPVE 291
V+ + L E LTG P ++ + +DVV++ PS + VGRSF
Sbjct: 121 FVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAP 180
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDV 348
D LG G GF ++ + L +D S AF K PVI F+ E + N D
Sbjct: 181 EGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDE 240
Query: 349 NG--FRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D +V+ +KGLK T + Y +C
Sbjct: 241 QPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVC 277
Score = 137 (53.3 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 769 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 811
>UNIPROTKB|Q5ZLG4 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0
GO:GO:0000932 GO:GO:0035278 HSSP:Q9UL18 CTD:192669 GO:GO:0006402
EMBL:AJ719770 IPI:IPI00594029 RefSeq:NP_001026071.1
UniGene:Gga.22391 ProteinModelPortal:Q5ZLG4 SMR:Q5ZLG4
STRING:Q5ZLG4 PRIDE:Q5ZLG4 GeneID:419628 KEGG:gga:419628
InParanoid:Q5ZLG4 NextBio:20822658 Uniprot:Q5ZLG4
Length = 860
Score = 208 (78.3 bits), Expect = 8.3e-24, Sum P(2) = 8.3e-24
Identities = 83/277 (29%), Positives = 129/277 (46%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 19 RRP-GYGTMG-KPIKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 71
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP---TG-KFNVEFPEGEDMKYRTYVFTIK 239
++ + D+ P+ YDG++++++A LP TG +V P GE K R + +IK
Sbjct: 72 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDVTLP-GEGGKDRPFKVSIK 126
Query: 240 LVNELKLCKLKEYLTGSLFSIP----RDI----LQGMDVVMKENPSRRMISVGRSFHPVE 291
V+ + L E LTG P + I + +DVV++ PS + VGRSF
Sbjct: 127 FVSRVSWHLLHEVLTGRTLPEPLEPDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAP 186
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDV 348
D LG G GF ++ + L +D S AF K PVI F+ E + N D
Sbjct: 187 EGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDE 246
Query: 349 NG--FRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D +V+ +KGLK T + Y +C
Sbjct: 247 QPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVC 283
Score = 137 (53.3 bits), Expect = 8.3e-24, Sum P(2) = 8.3e-24
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>MGI|MGI:2446634 [details] [associations]
symbol:Ago3 "argonaute RISC catalytic subunit 3"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IDA] [GO:0035278
"negative regulation of translation involved in gene silencing by
miRNA" evidence=ISO] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 MGI:MGI:2446634
EMBL:CH466552 GO:GO:0003723 SUPFAM:SSF53098 eggNOG:NOG279895
HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 EMBL:AL606976 GeneTree:ENSGT00640000091310
HOVERGEN:HBG006101 CTD:192669 GO:GO:0006402 EMBL:AB081473
EMBL:AK154436 EMBL:AK171118 EMBL:BC137964 IPI:IPI00229987
RefSeq:NP_700451.2 UniGene:Mm.440915 UniGene:Mm.482388
UniGene:Mm.483093 ProteinModelPortal:Q8CJF9 SMR:Q8CJF9
STRING:Q8CJF9 PhosphoSite:Q8CJF9 PaxDb:Q8CJF9 PRIDE:Q8CJF9
Ensembl:ENSMUST00000069097 GeneID:214150 KEGG:mmu:214150
InParanoid:Q3TBP7 OMA:GRSMPEP NextBio:374206 Bgee:Q8CJF9
CleanEx:MM_EIF2C3 Genevestigator:Q8CJF9
GermOnline:ENSMUSG00000028842 Uniprot:Q8CJF9
Length = 860
Score = 206 (77.6 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 80/277 (28%), Positives = 128/277 (46%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 19 RRP-GYGTMG-KPIKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 71
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP---TG-KFNVEFPEGEDMKYRTYVFTIK 239
++ + D+ P+ YDG++++++A LP TG +V P GE K R + ++K
Sbjct: 72 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDVTLP-GEGGKDRPFKVSVK 126
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGRSFHPVE 291
V+ + L E L G P ++ + +DVV++ PS + VGRSF
Sbjct: 127 FVSRVSWHLLHEALAGGTLPEPLELDKPVSTNPVHAVDVVLRHLPSMKYTPVGRSFFSAP 186
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDV 348
D LG G GF ++ + L +D S AF K PVI F+ E + N D
Sbjct: 187 EGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDE 246
Query: 349 NG--FRDWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D +V+ +KGLK T + Y +C
Sbjct: 247 QPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVC 283
Score = 137 (53.3 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YH 817
>UNIPROTKB|E1C5I5 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091310 EMBL:AADN02043839 EMBL:AADN02043840
EMBL:AADN02043841 IPI:IPI00822132 Ensembl:ENSGALT00000040886
ArrayExpress:E1C5I5 Uniprot:E1C5I5
Length = 794
Score = 202 (76.2 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 65/211 (30%), Positives = 104/211 (49%)
Query: 182 IVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTI 238
+VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +T+ +I
Sbjct: 1 MVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQTFKVSI 55
Query: 239 KLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDD 297
+ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E +
Sbjct: 56 QWVSVVSLQLLLEALAGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHP- 114
Query: 298 LGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINFDVNGFR 352
LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 115 LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLT 174
Query: 353 DWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 175 DSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 205
Score = 136 (52.9 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 709 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 751
>UNIPROTKB|Q5ZMW0 [details] [associations]
symbol:EIF2C4 "Protein argonaute-4" species:9031 "Gallus
gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=ISS] [GO:0035278 "negative regulation
of translation involved in gene silencing by miRNA" evidence=ISS]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0035068
GO:GO:0035278 HSSP:Q9UL18 GO:GO:0006402 EMBL:AJ719274
IPI:IPI00735148 RefSeq:NP_001034365.1 UniGene:Gga.42596
ProteinModelPortal:Q5ZMW0 SMR:Q5ZMW0 STRING:Q5ZMW0 GeneID:419629
KEGG:gga:419629 CTD:192670 InParanoid:Q5ZMW0 NextBio:20822659
ArrayExpress:Q5ZMW0 Uniprot:Q5ZMW0
Length = 794
Score = 202 (76.2 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 65/211 (30%), Positives = 104/211 (49%)
Query: 182 IVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTI 238
+VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +T+ +I
Sbjct: 1 MVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQTFKVSI 55
Query: 239 KLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDD 297
+ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E +
Sbjct: 56 QWVSVVSLQLLLEALAGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHP- 114
Query: 298 LGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINFDVNGFR 352
LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 115 LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLT 174
Query: 353 DWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 175 DSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 205
Score = 136 (52.9 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 709 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 751
>WB|WBGene00000105 [details] [associations]
symbol:alg-1 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IGI;IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IGI]
[GO:0040025 "vulval development" evidence=IMP] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0035198 "miRNA binding" evidence=IPI]
[GO:0035068 "micro-ribonucleoprotein complex" evidence=IPI]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0009792 GO:GO:0002009
GO:GO:0040010 GO:GO:0018996 GO:GO:0040011 GO:GO:0040018
GO:GO:0040035 GO:GO:0007281 SUPFAM:SSF53098 GO:GO:0035198
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932
GO:GO:0035068 GeneTree:ENSGT00640000091312 OMA:IKLEAEY
GO:GO:0040025 EMBL:Z69661 EMBL:Z69663 RefSeq:NP_001257239.1
ProteinModelPortal:G5EES3 SMR:G5EES3 EnsemblMetazoa:F48F7.1b
GeneID:181504 KEGG:cel:CELE_F48F7.1 CTD:181504 WormBase:F48F7.1b
Uniprot:G5EES3
Length = 1023
Score = 195 (73.7 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 50/176 (28%), Positives = 96/176 (54%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP+ G + R++ + NHF V P TI+HY +DV PD P ++++ +++ +
Sbjct: 161 RRPNHG--VEGRSILLRANHFAVRI-PGGTIQHYQVDVTPDKCPR-----RVNREIISCL 212
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGK----FNVEFPEGEDMKYRTYVFTIK 239
+ + + + P+ YDG++N+++ LP G+ F+V P G+ R + ++K
Sbjct: 213 ISAFSKYFTNIRPV----YDGKRNMYTREPLPIGRERMDFDVTLP-GDSAVERQFSVSLK 267
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPD 295
V ++ L L++ + G + +P + +Q MDV+++ PS + VGRSF P P+
Sbjct: 268 WVGQVSLSTLEDAMEGRVRQVPFEAVQAMDVILRHLPSLKYTPVGRSFFS-PPVPN 322
Score = 146 (56.5 bits), Expect = 6.0e-23, Sum P(2) = 6.0e-23
Identities = 33/93 (35%), Positives = 44/93 (47%)
Query: 366 HGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVMEGQXXXXXXX 425
+ T+D+LQ+L Y MC T+ RCT+ VS+ P YYA LVA+R R YH E
Sbjct: 936 NNLTADELQQLTYQMCHTYVRCTRSVSIPAPAYYAHLVAFRAR-YHLVDREHDSGEGSQP 994
Query: 426 XXXXXXXXXXXXXXXFDERFYKLHTDLENMMYF 458
R ++H D N+MYF
Sbjct: 995 SGTSEDTTLSNMA-----RAVQVHPDANNVMYF 1022
Score = 83 (34.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 33/135 (24%), Positives = 55/135 (40%)
Query: 256 SLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPF-PDDDLGYGLTASRGFQHGLKA 314
S FS P G V+ P + +V H + + LG G GF ++
Sbjct: 314 SFFSPPVPNASG--VMAGSCPPQASGAVAGGAHSAGQYHAESKLGGGREVWFGFHQSVRP 371
Query: 315 TSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENA--------LKGLKH 366
+ + L +D S AF + +PVI+F+ E + V + R + +A ++GLK
Sbjct: 372 SQWKMMLNIDVSATAFYRSMPVIEFIAEVLELPVQALAERRALSDAQRVKFTKEIRGLKI 431
Query: 367 GFTSDQLQKLIYNMC 381
T + Y +C
Sbjct: 432 EITHCGQMRRKYRVC 446
>UNIPROTKB|F1PGN2 [details] [associations]
symbol:EIF2C4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035278 "negative regulation of translation
involved in gene silencing by miRNA" evidence=IEA] [GO:0035068
"micro-ribonucleoprotein complex" evidence=IEA] [GO:0006402 "mRNA
catabolic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003723
SUPFAM:SSF53098 OMA:ENDILRT InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 GO:GO:0035068 GO:GO:0035278
GeneTree:ENSGT00640000091310 GO:GO:0006402 EMBL:AAEX03009640
Ensembl:ENSCAFT00000005657 Uniprot:F1PGN2
Length = 794
Score = 199 (75.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 64/211 (30%), Positives = 104/211 (49%)
Query: 182 IVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTI 238
+VR+ + + D+ P YDG++N+++A LP G+ V+ GE K +T+ ++
Sbjct: 1 MVRHFKMQIFGDRQP----GYDGKRNMYTAHPLPIGRDRVDMEVTLPGEG-KDQTFKVSV 55
Query: 239 KLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDD 297
+ V+ + L L E L G L +P D +Q +DV+ + PS R VGRSF P E +
Sbjct: 56 QWVSVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHP- 114
Query: 298 LGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE-----HINFDVNGFR 352
LG G GF ++ + L +D S AF + P+I+F+ E +IN
Sbjct: 115 LGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPLT 174
Query: 353 DWRKVE--NALKGLKHGFTSDQLQKLIYNMC 381
D ++V+ ++GLK T K Y +C
Sbjct: 175 DSQRVKFTKEIRGLKVEVTHCGQMKRKYRVC 205
Score = 136 (52.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 709 FTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 751
>UNIPROTKB|Q6T5B7 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9913 "Bos
taurus" [GO:0035278 "negative regulation of translation involved in
gene silencing by miRNA" evidence=ISS] [GO:0006402 "mRNA catabolic
process" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 GO:GO:0003723 SUPFAM:SSF53098
eggNOG:NOG279895 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 OrthoDB:EOG4229J0 GO:GO:0000932
GO:GO:0035278 HSSP:Q9UL18 EMBL:AY436348 IPI:IPI00697621
RefSeq:NP_001001133.1 UniGene:Bt.47704 STRING:Q6T5B7 GeneID:406231
KEGG:bta:406231 CTD:192669 InParanoid:Q6T5B7 NextBio:20817875
GO:GO:0006402 Uniprot:Q6T5B7
Length = 861
Score = 209 (78.6 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 79/276 (28%), Positives = 126/276 (45%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 19 RRP-GYGTMG-KPTKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 71
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPE---GEDMKYRTYVFTIKL 240
++ + D+ P+ YDG++++++A LP V+ GE K R + +IK
Sbjct: 72 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDATLPGEGGKDRPFKVSIKF 127
Query: 241 VNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGRSFHPVEP 292
V+ + L E LTG P ++ + +DVV++ PS + VGRSF
Sbjct: 128 VSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPE 187
Query: 293 FPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDVN 349
D LG G GF ++ + L +D S AF K PVI F+ E + N D
Sbjct: 188 GYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQ 247
Query: 350 G--FRDWRKVENA--LKGLKHGFTSDQLQKLIYNMC 381
D +V++ +KGLK T + Y +C
Sbjct: 248 PRPLTDSHRVKSTKEIKGLKVEVTHCGTMRRKYRVC 283
Score = 111 (44.1 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 368 FTSDQLQKLIYN-MCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y T+ CT+ VS+ P YYA LVA+R R YH
Sbjct: 775 FTADELQLLTYQPSAHTYVHCTRSVSIPAPAYYAHLVAFRAR-YH 818
>UNIPROTKB|Q5TA58 [details] [associations]
symbol:EIF2C1 "Protein argonaute-1" species:9606 "Homo
sapiens" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00949 SMART:SM00950 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 UniGene:Hs.22867
HGNC:HGNC:3262 OrthoDB:EOG4229J0 ChiTaRS:EIF2C1 HOVERGEN:HBG006101
GO:GO:0003743 IPI:IPI00646765 SMR:Q5TA58 STRING:Q5TA58
Ensembl:ENST00000373206 Uniprot:Q5TA58
Length = 782
Score = 179 (68.1 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 64/201 (31%), Positives = 89/201 (44%)
Query: 192 PDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTIKLVNELKLCK 248
P F YDG+KNI++ LP G V+F GE K R + +IK + +
Sbjct: 7 PQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEG-KDRIFKVSIKWLAIVSWRM 65
Query: 249 LKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH-PVEPFPDDDLGYGLTASRG 307
L E L +P + +Q +DV M+ S R VGRSF P E + LG G G
Sbjct: 66 LHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP-LGGGREVWFG 124
Query: 308 FQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHI---NFDVNG--FRDWRKVE--NA 360
F ++ + L +D S AF K PVI+F+ E + N D D ++V
Sbjct: 125 FHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRFTKE 184
Query: 361 LKGLKHGFTSDQLQKLIYNMC 381
+KGLK T K Y +C
Sbjct: 185 IKGLKVEVTHCGQMKRKYRVC 205
Score = 135 (52.6 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYH 411
FT+D+LQ L Y +C T+ RCT+ VS+ P YYA LVA+R R YH
Sbjct: 697 FTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRAR-YH 739
>TAIR|locus:2179008 [details] [associations]
symbol:AGO9 "ARGONAUTE 9" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0035197 "siRNA binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010529
"negative regulation of transposition" evidence=IMP] [GO:0048481
"ovule development" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006952
GO:GO:0006417 GO:GO:0006355 GO:GO:0006351 GO:GO:0010529
GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043 KO:K11593
GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 eggNOG:NOG286051 EMBL:AJ544236 EMBL:AC140977
EMBL:AK221864 IPI:IPI00538032 RefSeq:NP_197613.2 UniGene:At.31104
ProteinModelPortal:Q84VQ0 SMR:Q84VQ0 PaxDb:Q84VQ0 PRIDE:Q84VQ0
EnsemblPlants:AT5G21150.1 GeneID:832241 KEGG:ath:AT5G21150
TAIR:At5g21150 InParanoid:Q84YI4 OMA:QWPLISK PhylomeDB:Q84VQ0
Genevestigator:Q84VQ0 GO:GO:0048481 Uniprot:Q84VQ0
Length = 896
Score = 123 (48.4 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 34/107 (31%), Positives = 52/107 (48%)
Query: 122 PIKRPDGGGTLAIRTVNIFVNHFPVNFT-PESTIRHYDIDVKPDIGPNHGRPVKLSKTVL 180
P+ RP G G+ + + + NHF V F P HY + + + GRPV+ +K +
Sbjct: 36 PMARPRGSGSKG-QKIPLLTNHFGVKFNKPSGYFFHYSVAINYE----DGRPVE-AKGIG 89
Query: 181 AIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGK--FNVEFPE 225
+ +K+ E Y AYDGEK +F+ LP+ K F+V E
Sbjct: 90 RKILDKVQETYQSDLGAKYFAYDGEKTLFTVGALPSNKLDFSVVLEE 136
Score = 123 (48.4 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 38/138 (27%), Positives = 69/138 (50%)
Query: 232 RTYVFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRR-MISVGRSF-H- 288
+ ++ I ++ + + L G +D L+ +D++++++ +R+ + V +SF H
Sbjct: 163 KKFMVEISYAAKIPMQAIASALQGKETENLQDALRVLDIILRQSAARQGCLLVRQSFFHN 222
Query: 289 PVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINF-D 347
V+ F +G G++ RGF + T GL+L +D S + PV+DFL + N D
Sbjct: 223 DVKNFVP--IGGGVSGCRGFHSSFRTTQGGLSLNIDTSTTMIVQPGPVVDFLLANQNKKD 280
Query: 348 VNGFRDWRKVENALKGLK 365
G DW K LK L+
Sbjct: 281 PYGM-DWNKARRVLKNLR 297
Score = 90 (36.7 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 367 GFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVA 404
GF +D LQ+L++++ + + R T +S+V PV YA L A
Sbjct: 812 GFATDDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAA 849
>UNIPROTKB|F1RSJ1 [details] [associations]
symbol:EIF2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070551 "endoribonuclease activity, cleaving
siRNA-paired mRNA" evidence=IEA] [GO:0045947 "negative regulation
of translational initiation" evidence=IEA] [GO:0035279 "mRNA
cleavage involved in gene silencing by miRNA" evidence=IEA]
[GO:0035278 "negative regulation of translation involved in gene
silencing by miRNA" evidence=IEA] [GO:0035197 "siRNA binding"
evidence=IEA] [GO:0035068 "micro-ribonucleoprotein complex"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0005845
"mRNA cap binding complex" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0000340 "RNA
7-methylguanosine cap binding" evidence=IEA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0045947 GO:GO:0009791 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0000932 GO:GO:0005844
GO:GO:0035278 GeneTree:ENSGT00640000091310 GO:GO:0035197
GO:GO:0005845 GO:GO:0016442 GO:GO:0070551 GO:GO:0000340
GO:GO:0035279 GO:GO:0031054 EMBL:CU571011
Ensembl:ENSSSCT00000006516 OMA:VQTHRQE Uniprot:F1RSJ1
Length = 666
Score = 217 (81.4 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 64/190 (33%), Positives = 96/190 (50%)
Query: 202 YDGEKNIFSAIELPTGKFNVEFP---EGEDMKYRTYVFTIKLVNELKLCKLKEYLTGSLF 258
+DG KN+++A+ LP G+ VE GE K R + +IK V+ + L L + L+G L
Sbjct: 23 FDGRKNLYTAMPLPIGRDKVELEVTLPGEG-KDRIFKVSIKWVSCVSLQALHDALSGRLP 81
Query: 259 SIPRDILQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQG 318
S+P + +Q +DVVM+ PS R VGRSF + LG G GF ++ +
Sbjct: 82 SVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWK 141
Query: 319 LALCLDYSVLAFRKRLPVIDFLQEHINF-----DVNGFRDWRKVE--NALKGLKHGFTSD 371
+ L +D S AF K PVI+F+ E ++F D ++V+ +KGLK T
Sbjct: 142 MMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHC 201
Query: 372 QLQKLIYNMC 381
K Y +C
Sbjct: 202 GQMKRKYRVC 211
>TAIR|locus:2147072 [details] [associations]
symbol:AT5G21030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00950 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006417 GO:GO:0006355 GO:GO:0006351
GO:GO:0003723 GO:GO:0030529 SUPFAM:SSF53098 HOGENOM:HOG000116043
KO:K11593 GO:GO:0031047 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 ProtClustDB:PLN03202 EMBL:AC069325 IPI:IPI00541100
RefSeq:NP_197602.2 UniGene:At.54936 ProteinModelPortal:Q3E984
SMR:Q3E984 PaxDb:Q3E984 PRIDE:Q3E984 EnsemblPlants:AT5G21030.1
GeneID:832227 KEGG:ath:AT5G21030 TAIR:At5g21030 eggNOG:NOG246334
InParanoid:Q3E984 OMA:IDSNICH PhylomeDB:Q3E984
Genevestigator:Q3E984 Uniprot:Q3E984
Length = 850
Score = 166 (63.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 67/265 (25%), Positives = 120/265 (45%)
Query: 122 PIKRPDGGGTLAIRTVNIFVNHFPVNFT-PES-TIRHYDIDVKPDIGPNHGRPVKLSKTV 179
P+ R G G+ + + + NHF VNF P S HY + + + G P+ L+K
Sbjct: 24 PMTRR-GNGSKG-QKILLLTNHFRVNFRKPNSHNFFHYSVTITYE----DGSPL-LAKGF 76
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGK--FNVEF---PEGED------ 228
+ K+ + AYDG+KN+++ LP F+V P +
Sbjct: 77 GRKILEKVQQTCQADLGCKHFAYDGDKNLYTVGPLPRSSLDFSVVLETAPSRRNADKRLK 136
Query: 229 MKYRTYVFTIKLV---NELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRR-MISVG 284
+ +++ F + ++ E+ + + L G D ++ MD ++ +N +R+ + V
Sbjct: 137 LPHQSKKFNVAILFAPPEIPMEAIANALQGKKTKHLLDAIRVMDCILSQNAARQGCLLVR 196
Query: 285 RSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFL--QE 342
+SF + ++G G+ +GF + T GL+L +D S K PV+DFL +
Sbjct: 197 QSFFHNDAKYFANIGEGVDCCKGFHSSFRTTQGGLSLNIDVSTAMIVKPGPVVDFLIANQ 256
Query: 343 HIN--FDVNGFRDWRKVENALKGLK 365
+N F +N W+K +N LK L+
Sbjct: 257 GVNDPFSIN----WKKAKNTLKNLR 277
Score = 96 (38.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 367 GFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVA 404
GF +DQLQ+L++++ + + R T +SLV P+ YA L A
Sbjct: 766 GFDTDQLQELVHSLSYVYQRSTTAISLVAPICYAHLAA 803
>TAIR|locus:2059258 [details] [associations]
symbol:AGO4 "ARGONAUTE 4" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006342
"chromatin silencing" evidence=RCA;IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005719 "nuclear euchromatin" evidence=IDA] [GO:0015030 "Cajal
body" evidence=IDA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA;IMP] [GO:0006306 "DNA methylation" evidence=RCA;IMP]
[GO:0010495 "long-distance posttranscriptional gene silencing"
evidence=IMP] [GO:0009816 "defense response to bacterium,
incompatible interaction" evidence=IMP] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA;TAS] [GO:0030422 "production
of siRNA involved in RNA interference" evidence=IGI] [GO:0035197
"siRNA binding" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0007267 "cell-cell
signaling" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010073 "meristem
maintenance" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0016569 "covalent chromatin modification" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0031047 "gene silencing by
RNA" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0043085 "positive regulation
of catalytic activity" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] [GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0019048 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006417 GO:GO:0005730 GO:GO:0006351 GO:GO:0030529
GO:GO:0015030 SUPFAM:SSF53098 GO:GO:0031048 HOGENOM:HOG000116043
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 GO:GO:0030422 EMBL:AC005623 EMBL:AY035081
EMBL:AY051033 IPI:IPI00540794 PIR:A84668 RefSeq:NP_001189613.1
RefSeq:NP_565633.1 UniGene:At.13165 ProteinModelPortal:Q9ZVD5
SMR:Q9ZVD5 DIP:DIP-53402N IntAct:Q9ZVD5 STRING:Q9ZVD5 PaxDb:Q9ZVD5
PRIDE:Q9ZVD5 EnsemblPlants:AT2G27040.1 EnsemblPlants:AT2G27040.2
GeneID:817246 KEGG:ath:AT2G27040 TAIR:At2g27040 eggNOG:NOG286051
InParanoid:Q93VG2 OMA:SFFHNDP PhylomeDB:Q9ZVD5 ProtClustDB:PLN03202
Genevestigator:Q9ZVD5 GO:GO:0005719 GO:GO:0009816 GO:GO:0006306
GO:GO:0051567 Uniprot:Q9ZVD5
Length = 924
Score = 118 (46.6 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 31/129 (24%), Positives = 62/129 (48%)
Query: 238 IKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRR-MISVGRSFHPVEPFPDD 296
I ++ L L + G ++ ++ +D++++++ +R+ + V +SF +P +
Sbjct: 194 ISYAAKIPLQALANAMRGQESENSQEAIRVLDIILRQHAARQGCLLVRQSFFHNDPTNCE 253
Query: 297 DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRK 356
+G + RGF + T G++L +D + K PV+DFL + N DW K
Sbjct: 254 PVGGNILGCRGFHSSFRTTQGGMSLNMDVTTTMIIKPGPVVDFLIANQNARDPYSIDWSK 313
Query: 357 VENALKGLK 365
+ LK L+
Sbjct: 314 AKRTLKNLR 322
Score = 93 (37.8 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 15/38 (39%), Positives = 28/38 (73%)
Query: 367 GFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVA 404
GF++D+LQ+L++++ + + R T +S+V P+ YA L A
Sbjct: 840 GFSADELQELVHSLSYVYQRSTSAISVVAPICYAHLAA 877
Score = 90 (36.7 bits), Expect = 9.8e-14, Sum P(3) = 9.8e-14
Identities = 36/125 (28%), Positives = 53/125 (42%)
Query: 104 EPVAXXXXXXXHNAARYTPIKRPDGGGTLAIRTVNIFVNHFPVNFTP-ESTIRHYDIDVK 162
EPV P+ R G GT + + + NHF V+ + HY + +
Sbjct: 38 EPVRVKTELAEKKGPVRVPMARK-GFGTRG-QKIPLLTNHFKVDVANLQGHFFHYSVALF 95
Query: 163 PDIGPNHGRPVKLSKTVLAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGK--FN 220
D GRPV+ K V + +K+ + Y AYDGEK +F+ LP+ K F+
Sbjct: 96 YD----DGRPVE-QKGVGRKILDKVHQTYHSDLDGKEFAYDGEKTLFTYGALPSNKMDFS 150
Query: 221 VEFPE 225
V E
Sbjct: 151 VVLEE 155
>POMBASE|SPCC736.11 [details] [associations]
symbol:ago1 "argonaute" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IGI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0005724 "nuclear telomeric heterochromatin"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006808
"regulation of nitrogen utilization" evidence=IMP] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0030958 "RITS
complex" evidence=IDA] [GO:0031048 "chromatin silencing by small
RNA" evidence=IMP] [GO:0031934 "mating-type region heterochromatin"
evidence=IDA] [GO:0033167 "ARC complex" evidence=IDA] [GO:0033168
"conversion of ds siRNA to ss siRNA involved in RNA interference"
evidence=IMP] [GO:0051570 "regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0090052 "regulation of chromatin silencing at
centromere" evidence=IMP] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
PomBase:SPCC736.11 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 SUPFAM:SSF53098 GO:GO:0031048 eggNOG:NOG279895
HOGENOM:HOG000116043 InterPro:IPR014811 Pfam:PF08699
SUPFAM:SSF101690 PIR:T41568 RefSeq:NP_587782.1
ProteinModelPortal:O74957 DIP:DIP-29298N IntAct:O74957
STRING:O74957 EnsemblFungi:SPCC736.11.1 GeneID:2539403
KEGG:spo:SPCC736.11 KO:K11596 OMA:YFREKYS OrthoDB:EOG4B8NN4
NextBio:20800567 GO:GO:0033167 GO:GO:0005721 GO:GO:0031934
GO:GO:0005724 GO:GO:0030958 GO:GO:0033168 GO:GO:0090052
GO:GO:0051570 GO:GO:0006808 Uniprot:O74957
Length = 834
Score = 131 (51.2 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 58/246 (23%), Positives = 106/246 (43%)
Query: 125 RPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVR 184
RP GG L + + + N F + P TI Y + V G P K S+ +
Sbjct: 12 RPGYGG-LG-KQITLKANFFQIISLPNETINQYHVIV----GDGSRVPRKQSQLIW---N 62
Query: 185 NKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNEL 244
+K + Y ++ + YDG +S ++ G V G + R F+I+ +++
Sbjct: 63 SKEVKQYFGSSWMN-SVYDGRSMCWSKGDIADGTIKVNI--GSESHPREIEFSIQKSSKI 119
Query: 245 KLCKLKEYLTGSLFSIPRDI--LQGMDVVMKENPSRRMISVGRSFHPVEPFPDDDLGYGL 302
L L +++ S P+ + + +D+++K+ PS + SF E LG G+
Sbjct: 120 NLHTLSQFVNSKYSSDPQVLSSIMFLDLLLKKKPSETLFGFMHSFFTGEN--GVSLGGGV 177
Query: 303 TASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALK 362
A +GF ++ +++ +D S AF + ++ L E+ D + RD + + LK
Sbjct: 178 EAWKGFYQSIRPNQGFMSVNVDISSSAFWRNDSLLQILMEYT--DCSNVRDLTRFD--LK 233
Query: 363 GLKHGF 368
L F
Sbjct: 234 RLSRKF 239
Score = 123 (48.4 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 371 DQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVME 416
DQ Q L YN+C+ +AR T VSLVPPVYYA LV+ R Y + +
Sbjct: 758 DQFQTLCYNLCYVYARATSAVSLVPPVYYAHLVSNLAR-YQDVTAD 802
>FB|FBgn0087035 [details] [associations]
symbol:AGO2 "Argonaute 2" species:7227 "Drosophila
melanogaster" [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0030422 "production of siRNA involved in RNA interference"
evidence=IMP;IDA] [GO:0016442 "RNA-induced silencing complex"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=TAS] [GO:0016246 "RNA interference"
evidence=IDA;NAS;IMP;TAS] [GO:0048102 "autophagic cell death"
evidence=IEP] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0035197 "siRNA binding" evidence=IDA]
[GO:0035087 "siRNA loading onto RISC involved in RNA interference"
evidence=IDA;IMP] [GO:0035190 "syncytial nuclear migration"
evidence=IMP] [GO:0007349 "cellularization" evidence=IMP]
[GO:0007279 "pole cell formation" evidence=IMP] [GO:0004521
"endoribonuclease activity" evidence=IDA] [GO:0035195 "gene
silencing by miRNA" evidence=IMP] [GO:0051607 "defense response to
virus" evidence=IMP] [GO:0033227 "dsRNA transport" evidence=IMP]
[GO:0007367 "segment polarity determination" evidence=IGI]
[GO:0070578 "RISC-loading complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0045071 "negative regulation of viral
genome replication" evidence=IMP] [GO:0070868 "heterochromatin
organization involved in chromatin silencing" evidence=IMP]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0005737 GO:GO:0019048 EMBL:AE014296
GO:GO:0051607 GO:GO:0045071 SUPFAM:SSF53098 eggNOG:NOG279895
KO:K11593 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GO:GO:0035197 GO:GO:0016442 EMBL:BT003546 EMBL:BT099682
EMBL:DQ228766 EMBL:DQ228767 EMBL:DQ228768 EMBL:DQ228769
EMBL:DQ228770 EMBL:DQ228771 EMBL:DQ228772 EMBL:DQ228773
EMBL:AY094751 RefSeq:NP_648775.1 RefSeq:NP_730054.1 UniGene:Dm.9677
PDB:1R6Z PDB:1T2R PDB:1T2S PDB:1VYN PDB:3MJ0 PDBsum:1R6Z
PDBsum:1T2R PDBsum:1T2S PDBsum:1VYN PDBsum:3MJ0
ProteinModelPortal:Q9VUQ5 SMR:Q9VUQ5 DIP:DIP-41570N IntAct:Q9VUQ5
MINT:MINT-248245 STRING:Q9VUQ5 PaxDb:Q9VUQ5
EnsemblMetazoa:FBtr0075559 GeneID:39683 KEGG:dme:Dmel_CG7439
CTD:39683 FlyBase:FBgn0087035 GeneTree:ENSGT00640000091312
InParanoid:Q9VUQ5 OMA:QGRQGQE OrthoDB:EOG47D7X0
EvolutionaryTrace:Q9VUQ5 GenomeRNAi:39683 NextBio:814859
Bgee:Q9VUQ5 GermOnline:CG7439 GO:GO:0070578 GO:GO:0004521
GO:GO:0033227 GO:GO:0070868 GO:GO:0007279 GO:GO:0030422
GO:GO:0035071 GO:GO:0007367 GO:GO:0035087 GO:GO:0035190
GO:GO:0030423 Uniprot:Q9VUQ5
Length = 1214
Score = 135 (52.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 62/254 (24%), Positives = 109/254 (42%)
Query: 130 GTLAIRTVNIFVNHFPVNFTPESTIR-HYDIDVKPDIGPNHGRPVKLSKTVLAIVRNKLC 188
GT+ + + +N+ ++ + ++ HYD+ + P+ RP K + R
Sbjct: 408 GTIG-KPGQVGINYLDLDLSKMPSVAYHYDVKIMPE------RPKKFYRQAFEQFR---- 456
Query: 189 EDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLV----NEL 244
DQ ++ AYDG+ + +S +LP N E D RT +TI++ + +
Sbjct: 457 ---VDQLGGAVLAYDGKASCYSVDKLPLNSQNPEVTV-TDRNGRTLRYTIEIKETGDSTI 512
Query: 245 KLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFHPV-EPFPDDDLGYGLT 303
L L Y+ +F P +Q ++VV+ + I VGRSF + +P +L G
Sbjct: 513 DLKSLTTYMNDRIFDKPMRAMQCVEVVLASPCHNKAIRVGRSFFKMSDPNNRHELDDGYE 572
Query: 304 ASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQEH-----INFDVNGFRDWRKVE 358
A G + L +D S +F +P+I++L+ IN N R +E
Sbjct: 573 ALVGLYQAFMLGDRPF-LNVDISHKSFPISMPMIEYLERFSLKAKINNTTNLDYSRRFLE 631
Query: 359 NALKGLKHGFTSDQ 372
L+G+ +T Q
Sbjct: 632 PFLRGINVVYTPPQ 645
Score = 113 (44.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 371 DQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLY 410
D LQ+L YN+C F RC + VS P Y A LVA RGR+Y
Sbjct: 1143 DLLQQLTYNLCHMFPRCNRSVSYPAPAYLAHLVAARGRVY 1182
Score = 41 (19.5 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 356 KVENALKGLKHGFTSDQLQKLIYNMCFTFARCTKP 390
K+ + L G+ H D ++ N + A T P
Sbjct: 935 KINSKLNGINHKIKDDPRLPMMKNTMYIGADVTHP 969
>UNIPROTKB|Q5TA56 [details] [associations]
symbol:EIF2C3 "Protein argonaute-3" species:9606 "Homo
sapiens" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR003100 EMBL:CH471059 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AL139286 GO:GO:0003743
EMBL:AL138787 UniGene:Hs.657659 HGNC:HGNC:18421 ChiTaRS:EIF2C3
IPI:IPI00514988 SMR:Q5TA56 STRING:Q5TA56 Ensembl:ENST00000324350
Ensembl:ENST00000397828 UCSC:uc001bzn.1 HOGENOM:HOG000139684
HOVERGEN:HBG058528 Uniprot:Q5TA56
Length = 229
Score = 167 (63.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 62/213 (29%), Positives = 102/213 (47%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIV 183
+RP G GT+ + + + N F V P+ + Y++D+KPD P R V + V ++V
Sbjct: 19 RRP-GYGTMG-KPIKLLANCFQVEI-PKIDVYLYEVDIKPDKCP---RRVN-REVVDSMV 71
Query: 184 RNKLCEDYPDQFPLSMTAYDGEKNIFSAIELP---TG-KFNVEFPEGEDMKYRTYVFTIK 239
++ + D+ P+ YDG++++++A LP TG +V P GE K R + +IK
Sbjct: 72 QHFKVTIFGDRRPV----YDGKRSLYTANPLPVATTGVDLDVTLP-GEGGKDRPFKVSIK 126
Query: 240 LVNELKLCKLKEYLTGSLFSIPRDI--------LQGMDVVMKENPSRRMISVGRSFHPVE 291
V+ + L E LTG P ++ + +DVV++ PS + VGRSF
Sbjct: 127 FVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAP 186
Query: 292 PFPDDDLGYGLTASRGFQHGLKATSQGLALCLD 324
D LG G GF ++ + L +D
Sbjct: 187 EGYDHPLGGGREVWFGFHQSVRPAMWKMMLNID 219
>ASPGD|ASPL0000044981 [details] [associations]
symbol:rsdA species:162425 "Emericella nidulans"
[GO:0031047 "gene silencing by RNA" evidence=IMP] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 EMBL:BN001307
GO:GO:0003676 SUPFAM:SSF53098 eggNOG:NOG279895 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 EMBL:AACD01000024 RefSeq:XP_659123.1
ProteinModelPortal:Q5BD61 PRIDE:Q5BD61
EnsemblFungi:CADANIAT00008147 GeneID:2874578 KEGG:ani:AN1519.2
HOGENOM:HOG000158169 OMA:TRARCYL OrthoDB:EOG4CJZRC Uniprot:Q5BD61
Length = 1019
Score = 124 (48.7 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 370 SDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEAVME 416
+D L+ + ++MC+ F R TK VS+ PP YYADLV R R Y + E
Sbjct: 937 ADMLEAMTHHMCYLFGRATKAVSICPPAYYADLVCTRARCYLSSAFE 983
Score = 107 (42.7 bits), Expect = 9.8e-11, Sum P(2) = 9.8e-11
Identities = 59/236 (25%), Positives = 98/236 (41%)
Query: 124 KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIR-HYDIDV---KPDIGPNHGRPVKLSKTV 179
+RP G GT + +F N+ + + +S R H +ID KP L +
Sbjct: 115 ERP-GYGTQG-HPIQLFANYLELKSSGKSLFRYHINIDGGGRKPSSRKAKQIICLLLEDH 172
Query: 180 LAIVRNKLCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEF-PEGEDMKY---RTYV 235
+ R+ + DY + D E+ P+ K+NV + E ED TY
Sbjct: 173 FSPFRHSIVTDYRSNLISHLEILDHEQ--------PSVKYNVTYRSEKEDEPRDTSETYR 224
Query: 236 FTIKLVNELKLCKLKEYLTGS----LFSIPRDILQGMDVVMKENPSRR--MISVGRSFH- 288
T K L L YLT S + +ILQ +++V+ +P + SVG + H
Sbjct: 225 ITCKFTGRLDPADLLNYLTSSNAASMLQEKAEILQALNIVLGHHPKSTGSIASVGTNKHY 284
Query: 289 PVEPFPDD--DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAFRKRLPVIDFLQE 342
+ + DLG GL A RG+ ++A + L + + +A + P+ ++E
Sbjct: 285 AIHDNAAEKFDLGAGLEALRGYFVSVRAATARLLVNIQVKYVACYQDGPLYQVIRE 340
>UNIPROTKB|G4N9J3 [details] [associations]
symbol:MGG_14873 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003100 InterPro:IPR003165
InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821
PROSITE:PS50822 SMART:SM00949 SMART:SM00950 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
EMBL:CM001234 RefSeq:XP_003716704.1 ProteinModelPortal:G4N9J3
EnsemblFungi:MGG_14873T0 GeneID:12984579 KEGG:mgr:MGG_14873
Uniprot:G4N9J3
Length = 1030
Score = 132 (51.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 367 GFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHE 412
G++ D+LQK++Y C+ +AR T PVSL P +YYA L + RGR HE
Sbjct: 925 GYSPDELQKMLYQQCYQYARSTTPVSLHPAIYYAHLASARGRC-HE 969
Score = 91 (37.1 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 54/230 (23%), Positives = 98/230 (42%)
Query: 121 TPI-KRPDGGGTLAIRTVNIFVNHFPVNFTPESTIRHYDIDVKPDIGPNHGRPVKLSKTV 179
TP KRP G G+L + +N+ +N+F + I YD+ + P P+K + +
Sbjct: 137 TPFAKRP-GMGSLG-KKINLQLNYFSILKIELPDIYLYDLSISPT-------PLKPEQVI 187
Query: 180 LAIVRNKLCEDYPD-QFPLSMTAYD---GEKNI-FSAIELPTG------KFNVEFPEGED 228
K C + P Q + T ++N+ +S + G + E+
Sbjct: 188 ------KKCWNTPTWQAKIGSTRSPWIFNKRNLAWSTHKTEDGGLRALLDLDAEYGRTGG 241
Query: 229 MKYRTYVFTIKLVNELKLCKLKEYLTGSL-FSIP-RDILQGMDVVMKENPSRRMISVGRS 286
+ F++K V + + L+ YL G + F+ + L +D V++E PS+RMI + R+
Sbjct: 242 RAANKFNFSVKPVGRITMDSLRMYLEGKIAFNTHILECLNFLDHVLREGPSQRMIPIKRN 301
Query: 287 FHP----VEPFPDD--DLGYGLTASRGFQHGLKATSQGLALCLDYSVLAF 330
F+ P D ++ G+ AS + GL + +D + F
Sbjct: 302 FYSKSRHATPMGDGVIEVLKGIFASLRMSQSINDGKFGLGINVDVANTCF 351
>WB|WBGene00011910 [details] [associations]
symbol:T22B3.2b species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
InterPro:IPR003100 InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02170 Pfam:PF02171 PROSITE:PS50821 PROSITE:PS50822
SMART:SM00950 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GeneTree:ENSGT00640000091312
GO:GO:0043186 EMBL:Z68300 EMBL:Z68750 UniGene:Cel.5687
GeneID:178106 KEGG:cel:CELE_T22B3.2 CTD:178106 NextBio:899736
PIR:T23164 PIR:T23165 RefSeq:NP_502217.1 ProteinModelPortal:G5ED77
SMR:G5ED77 PRIDE:G5ED77 EnsemblMetazoa:T22B3.2b WormBase:T22B3.2b
OMA:DATQREE Uniprot:G5ED77
Length = 1035
Score = 139 (54.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLY 410
FT+D++Q + Y MC T+ RCT+ VS+ PVYYADLVA R R +
Sbjct: 917 FTADEIQNITYGMCHTYGRCTRSVSIPTPVYYADLVATRARCH 959
Score = 78 (32.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 40/175 (22%), Positives = 81/175 (46%)
Query: 123 IKRPDGGGTLAIRTVNIFVNHFPVNF-TPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLA 181
+ RP G GT+ R + + N F V+ P+ + Y ++V +H KL K +
Sbjct: 85 VARP-GLGTIG-RKIPVKSNFFAVDLKNPKMVVVQYHVEV------HHPGCRKLDKDEMR 136
Query: 182 IVRNKLCEDYPDQFPLSMT-AYDGEKNIFSA--IELPTGKFNVEFP-EG---EDMKYRTY 234
I+ K D+P+ F AYDG +++ +E P + +V E +D + RT
Sbjct: 137 IIFWKAVSDHPNIFHNKFALAYDGAHQLYTVARLEFPDDQGSVRLDCEATLPKDNRDRTR 196
Query: 235 -VFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH 288
+I+ V + L +++ T +L +Q +D++ +++ + ++ +F+
Sbjct: 197 CAISIQNVGPV-LLEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFY 250
>WB|WBGene00006449 [details] [associations]
symbol:tag-76 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00950 GO:GO:0003676
GO:GO:0019915 SUPFAM:SSF53098 eggNOG:NOG279895 HOGENOM:HOG000116043
InterPro:IPR014811 Pfam:PF08699 SUPFAM:SSF101690
GeneTree:ENSGT00640000091312 EMBL:Z29121 EMBL:Z30215 PIR:D88568
PIR:S41013 RefSeq:NP_499191.1 RefSeq:NP_499192.1 RefSeq:NP_499193.1
ProteinModelPortal:P34681 SMR:P34681 STRING:P34681 PRIDE:P34681
EnsemblMetazoa:ZK757.3a.1 EnsemblMetazoa:ZK757.3a.2 GeneID:13190961
GeneID:176400 KEGG:cel:CELE_ZK757.3 KEGG:cel:CELE_ZK757.3a
UCSC:ZK757.3b CTD:176400 WormBase:ZK757.3a WormBase:ZK757.3b
WormBase:ZK757.3c InParanoid:P34681 OMA:ARIFCKY NextBio:892412
Uniprot:P34681
Length = 1040
Score = 139 (54.0 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 368 FTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLY 410
FT+D++Q + Y MC T+ RCT+ VS+ PVYYADLVA R R +
Sbjct: 922 FTADEIQSITYGMCHTYGRCTRSVSIPTPVYYADLVATRARCH 964
Score = 74 (31.1 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 38/175 (21%), Positives = 81/175 (46%)
Query: 123 IKRPDGGGTLAIRTVNIFVNHFPVNF-TPESTIRHYDIDVKPDIGPNHGRPVKLSKTVLA 181
+ RP G GT+ R + + N F ++ P+ + Y +++ +H KL K +
Sbjct: 87 VARP-GLGTIG-RQIPVKSNFFAMDLKNPKMVVIQYHVEI------HHPGCRKLDKDEMR 138
Query: 182 IVRNKLCEDYPDQFPLSMT-AYDGEKNIFSA--IELPTGKFNVEFP-EG---EDMKYRTY 234
I+ K D+P+ F AYDG +++ +E P + +V E +D + RT
Sbjct: 139 IIFWKAVSDHPNIFHNKFALAYDGAHQLYTVARLEFPDDQGSVRLDCEASLPKDNRDRTR 198
Query: 235 -VFTIKLVNELKLCKLKEYLTGSLFSIPRDILQGMDVVMKENPSRRMISVGRSFH 288
+I+ V + L +++ T +L +Q +D++ +++ + ++ +F+
Sbjct: 199 CAISIQNVGPV-LLEMQRTRTNNLDERVLTPIQILDIICRQSLTCPLLKNSANFY 252
>TAIR|locus:2059370 [details] [associations]
symbol:AGO6 "ARGONAUTE 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IGI] [GO:0030422
"production of siRNA involved in RNA interference" evidence=IMP]
[GO:0035197 "siRNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] InterPro:IPR003100
InterPro:IPR003165 InterPro:IPR012337 Pfam:PF02170 Pfam:PF02171
PROSITE:PS50821 PROSITE:PS50822 SMART:SM00949 SMART:SM00950
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952
GO:GO:0006417 GO:GO:0006351 GO:GO:0030529 SUPFAM:SSF53098
GO:GO:0006342 HOGENOM:HOG000116043 KO:K11593 InterPro:IPR014811
Pfam:PF08699 SUPFAM:SSF101690 GO:GO:0035197 GO:GO:0030422
GO:GO:0006306 EMBL:AC003033 IPI:IPI00537010 PIR:T01113
RefSeq:NP_180853.2 UniGene:At.53011 ProteinModelPortal:O48771
SMR:O48771 STRING:O48771 PaxDb:O48771 PRIDE:O48771
EnsemblPlants:AT2G32940.1 GeneID:817856 KEGG:ath:AT2G32940
TAIR:At2g32940 eggNOG:NOG271046 InParanoid:O48771 OMA:CLDVGKP
PhylomeDB:O48771 Genevestigator:O48771 Uniprot:O48771
Length = 878
Score = 103 (41.3 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 262 RDILQGMDVVMKENPSRR-MISVGRSFHPVEPFPDDDLGYGLTASRGFQHGLKATSQGLA 320
+D L+ +D+V+++ + R + V ++F + P +G G+ RG + T GL+
Sbjct: 186 QDALRVLDIVLRQQAAERGCLLVRQAFFHSDGHPMK-VGGGVIGIRGLHSSFRPTHGGLS 244
Query: 321 LCLDYSVLAFRKRLPVIDFLQEHINFDVNGFRDWRKVENALKGLKHGFTSDQLQ-KLI 377
L +D S + PVI+FL+ + + + DW K LK ++ T ++ K+I
Sbjct: 245 LNIDVSTTMILEPGPVIEFLKANQSVETPRQIDWIKAAKMLKHMRVKATHRNMEFKII 302
Score = 81 (33.6 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 367 GFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVA 404
GF+ D LQ LI+++ + R T S+V PV YA L A
Sbjct: 806 GFSPDDLQNLIHSLSYVNQRSTTATSIVAPVRYAHLAA 843
Score = 69 (29.3 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 22/94 (23%), Positives = 42/94 (44%)
Query: 128 GGGTLAIRTVNIFVNHFPVNFT-PESTIRHYDIDVKPDIGPNHGRPVKLSKTVLAIVRNK 186
G GT + + NHF V+ P+ Y + + + G + +S+ ++ ++
Sbjct: 31 GVGTTG-NPIELCTNHFNVSVRQPDVVFYQYTVSITTENG-DAVDGTGISRKLM----DQ 84
Query: 187 LCEDYPDQFPLSMTAYDGEKNIFSAIELPTGKFN 220
L + Y AYDGEK +++ LP +F+
Sbjct: 85 LFKTYSSDLDGKRLAYDGEKTLYTVGPLPQNEFD 118
Score = 42 (19.8 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 190 DYPDQFPLSMTAYDGEKNIFSAIELPTGKFNVEFPEGEDMKYRTYVFTIKLVNE 243
+ P +T G + IEL T FNV + D+ + Y +T+ + E
Sbjct: 17 EQPSHRDYDITTRRGVGTTGNPIELCTNHFNVSVRQ-PDVVF--YQYTVSITTE 67
>ASPGD|ASPL0000078334 [details] [associations]
symbol:smsA species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003165 InterPro:IPR012337
Pfam:PF02171 PROSITE:PS50822 SMART:SM00950 SUPFAM:SSF53098
eggNOG:NOG279895 OrthoDB:EOG4B8NN4 GO:GO:0003743 EMBL:BN001303
EMBL:AACD01000084 RefSeq:XP_662497.1 ProteinModelPortal:Q5B3I7
EnsemblFungi:CADANIAT00005509 GeneID:2872682 KEGG:ani:AN4893.2
Uniprot:Q5B3I7
Length = 200
Score = 103 (41.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 361 LKGLKHGFTSDQLQKLIYNMCFTFARCTKPVSLVPPVYYADLVAYRGRLYHEA 413
L +KH +LQ +IY+ C+ + R T VSL P +YYA L++ R R + +A
Sbjct: 105 LDEIKH--RPQELQNMIYDHCYQYMRSTTSVSLFPAIYYAHLISNRARHHDDA 155
Score = 45 (20.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 212 IELPTGKFNVEFPEGEDMKYRTYV 235
I+LP G F++++ D + Y+
Sbjct: 27 IDLPYGTFSIDYYGTNDASFEIYI 50
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.141 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 459 344 0.00097 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 605 (64 KB)
Total size of DFA: 236 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.35u 0.17s 25.52t Elapsed: 00:00:02
Total cpu time: 25.36u 0.17s 25.53t Elapsed: 00:00:02
Start: Sat May 11 02:30:53 2013 End: Sat May 11 02:30:55 2013