Query 012650
Match_columns 459
No_of_seqs 281 out of 560
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 13:34:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ix7_C Myosin-5A; contractIle 98.9 4E-09 1.4E-13 80.5 7.2 53 124-177 3-56 (58)
2 1n2d_C IQ2 and IQ3 motifs from 98.6 7.5E-08 2.6E-12 70.6 6.0 41 127-167 4-47 (48)
3 2dfs_A Myosin-5A; myosin-V, in 98.4 4E-07 1.4E-11 104.4 9.4 69 123-192 813-882 (1080)
4 2dfs_A Myosin-5A; myosin-V, in 98.4 6.4E-07 2.2E-11 102.7 10.4 66 126-192 768-834 (1080)
5 2l53_B CAM, voltage-gated sodi 97.9 4.7E-06 1.6E-10 56.9 2.7 23 124-146 4-26 (31)
6 2kxw_B Sodium channel protein 97.8 5.5E-06 1.9E-10 54.9 1.7 22 124-145 4-25 (27)
7 1n2d_C IQ2 and IQ3 motifs from 97.5 0.00016 5.6E-09 52.6 6.2 43 148-191 3-45 (48)
8 2ix7_C Myosin-5A; contractIle 96.5 0.0043 1.5E-07 46.8 5.8 42 148-192 5-46 (58)
9 1wdc_A Scallop myosin; calcium 96.4 0.0066 2.3E-07 46.8 6.3 39 127-165 7-49 (64)
10 1wdc_A Scallop myosin; calcium 96.3 0.0069 2.4E-07 46.7 6.0 44 149-192 7-50 (64)
11 2bl0_A Major plasmodial myosin 96.3 0.0063 2.1E-07 46.9 5.6 41 151-191 7-47 (63)
12 3gn4_A Myosin-VI; unconvention 96.3 0.0043 1.5E-07 56.2 5.1 35 124-158 43-78 (148)
13 2bl0_A Major plasmodial myosin 96.2 0.0048 1.7E-07 47.5 4.7 41 127-167 5-49 (63)
14 1kk8_A Myosin heavy chain, str 96.1 0.0064 2.2E-07 68.2 6.5 42 126-167 779-824 (837)
15 1i84_S Smooth muscle myosin he 93.9 0.046 1.6E-06 63.2 5.4 41 127-167 793-837 (1184)
16 4dck_A Sodium channel protein 91.8 0.13 4.3E-06 47.5 4.1 27 121-147 125-151 (168)
17 1kk8_A Myosin heavy chain, str 90.6 0.41 1.4E-05 53.8 7.5 44 149-192 780-823 (837)
18 1i84_S Smooth muscle myosin he 84.5 1.4 4.9E-05 50.9 7.2 44 149-192 793-836 (1184)
19 1w7j_A Myosin VA; motor protei 83.8 0.76 2.6E-05 51.4 4.4 25 126-150 768-792 (795)
20 4anj_A Unconventional myosin-V 74.4 3.5 0.00012 47.5 6.1 41 126-167 775-816 (1052)
21 3gn4_A Myosin-VI; unconvention 50.9 28 0.00096 31.3 6.1 20 149-168 46-65 (148)
22 2f3y_B Voltage-dependent L-typ 27.3 35 0.0012 22.2 2.0 19 128-146 4-22 (26)
23 3dvk_B Voltage-dependent R-typ 25.2 27 0.00091 22.2 1.1 17 126-142 6-22 (23)
24 2be6_D Voltage-dependent L-typ 25.0 50 0.0017 23.1 2.6 21 125-145 10-30 (37)
25 4anj_A Unconventional myosin-V 23.7 1E+02 0.0034 35.6 6.3 43 147-192 773-815 (1052)
26 3bxl_B CAM, voltage-dependent 20.9 60 0.002 21.1 2.1 18 127-144 3-20 (26)
No 1
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=98.88 E-value=4e-09 Score=80.50 Aligned_cols=53 Identities=28% Similarity=0.407 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhh-hHHHHHHHhhhhHHHHHHHHHHHHHhHH
Q 012650 124 IRQLAATRIQSIFRGYLARKALRALK-GIVKLQALIRGRNVRRQAFTTLKCLQSI 177 (459)
Q Consensus 124 ~ee~AAi~IQsafRGylARralralk-glVrLQalvRG~~vRrq~~~tlr~~qa~ 177 (459)
+.+.|||.||+.||||++|+.|..++ ++|.||+.+||+.+|+.+ ..++...++
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~~r~~~aA 56 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYA-KFLRRTKAA 56 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCc
Confidence 35789999999999999999999655 899999999999999999 455555554
No 2
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.59 E-value=7.5e-08 Score=70.61 Aligned_cols=41 Identities=24% Similarity=0.372 Sum_probs=36.8
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhh---hHHHHHHHhhhhHHHHHH
Q 012650 127 LAATRIQSIFRGYLARKALRALK---GIVKLQALIRGRNVRRQA 167 (459)
Q Consensus 127 ~AAi~IQsafRGylARralralk---glVrLQalvRG~~vRrq~ 167 (459)
.|||.||+.+|||++|+.+..++ +.|.||+.+||+.+|+.+
T Consensus 4 ~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 4 QAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 47899999999999999998543 899999999999999876
No 3
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=98.42 E-value=4e-07 Score=104.35 Aligned_cols=69 Identities=29% Similarity=0.256 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHH-HhhhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhc
Q 012650 123 EIRQLAATRIQSIFRGYLARKALR-ALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA 192 (459)
Q Consensus 123 ~~ee~AAi~IQsafRGylARralr-alkglVrLQalvRG~~vRrq~~~tlr~~qa~v~iQs~vRa~r~R~~ 192 (459)
.+++.||++||+.||||++|+.|+ ...+++.||+.+||+.+|+++ ..++...+++.||+.+|++..|+.
T Consensus 813 lr~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~-~~lr~~~aav~IQ~~~Rg~l~R~~ 882 (1080)
T 2dfs_A 813 LRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKY-QMMLREHKSIIIQKHVRGWLARVH 882 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTTTHHHHH
T ss_pred cccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999 455799999999999999988 445555677777777777766654
No 4
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=98.40 E-value=6.4e-07 Score=102.66 Aligned_cols=66 Identities=29% Similarity=0.360 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhhhhHHHHHHHH-hhhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhc
Q 012650 126 QLAATRIQSIFRGYLARKALRA-LKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA 192 (459)
Q Consensus 126 e~AAi~IQsafRGylARralra-lkglVrLQalvRG~~vRrq~~~tlr~~qa~v~iQs~vRa~r~R~~ 192 (459)
..||+.||+.||||++|+.|+. ..+++.||+.+||+.+|+.+ ..++...|++.||+.+|++..|+.
T Consensus 768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~-~~lr~~~AAi~IQs~~Rg~~~Rk~ 834 (1080)
T 2dfs_A 768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQRMYVVRKR 834 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcc-cccccchhHHHHHHHHhhHHHHHH
Confidence 5689999999999999999994 55899999999999999998 567889999999999999998876
No 5
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=97.93 E-value=4.7e-06 Score=56.90 Aligned_cols=23 Identities=30% Similarity=0.465 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHH
Q 012650 124 IRQLAATRIQSIFRGYLARKALR 146 (459)
Q Consensus 124 ~ee~AAi~IQsafRGylARralr 146 (459)
.||.||+.||.|||+||.|+.+.
T Consensus 4 ~Ee~aA~vIQrA~R~yl~rr~~~ 26 (31)
T 2l53_B 4 SEEVSAMVIQRAFRRHLLQRSLK 26 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 58999999999999999998865
No 6
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=97.83 E-value=5.5e-06 Score=54.89 Aligned_cols=22 Identities=27% Similarity=0.510 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHH
Q 012650 124 IRQLAATRIQSIFRGYLARKAL 145 (459)
Q Consensus 124 ~ee~AAi~IQsafRGylARral 145 (459)
.||.||+.||.|||+||.|+.+
T Consensus 4 ~Ee~aA~vIQrA~R~yl~~~~~ 25 (27)
T 2kxw_B 4 QEEVSAIVIQRAYRRYLLKQKV 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 5899999999999999998753
No 7
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.00016 Score=52.60 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=38.0
Q ss_pred hhhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhhhhh
Q 012650 148 LKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQK 191 (459)
Q Consensus 148 lkglVrLQalvRG~~vRrq~~~tlr~~qa~v~iQs~vRa~r~R~ 191 (459)
.++++.||+.+||+++|+++ ..++...+++.||+.+|++.+|+
T Consensus 3 r~a~i~iQ~~~Rg~l~R~~~-~~~~~~~aai~IQ~~~Rg~~~Rk 45 (48)
T 1n2d_C 3 SQAIKYLQNNIKGFIIRQRV-NDEMKVNCATLLQAAYRGHSIRA 45 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhHHHHH
Confidence 35789999999999999999 56677789999999999998875
No 8
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=96.52 E-value=0.0043 Score=46.78 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=36.2
Q ss_pred hhhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhc
Q 012650 148 LKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA 192 (459)
Q Consensus 148 lkglVrLQalvRG~~vRrq~~~tlr~~qa~v~iQs~vRa~r~R~~ 192 (459)
...+|.||+.+||+.+|+.+. +...+++.||+.+|++..|+.
T Consensus 5 ~~aai~IQ~~~Rg~~~Rk~~~---~~r~aai~IQ~~~Rg~~aR~~ 46 (58)
T 2ix7_C 5 RAACIRIQKTIRGWLLRKRYL---CMQRAAITVQRYVRGYQARCY 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999993 334699999999999988865
No 9
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.40 E-value=0.0066 Score=46.84 Aligned_cols=39 Identities=38% Similarity=0.463 Sum_probs=21.5
Q ss_pred HHHHHHHHHhhhhHHHHHHHHh----hhHHHHHHHhhhhHHHH
Q 012650 127 LAATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRR 165 (459)
Q Consensus 127 ~AAi~IQsafRGylARralral----kglVrLQalvRG~~vRr 165 (459)
...+.||+..||||+|+.|..+ .++..||.=+|++..++
T Consensus 7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~ 49 (64)
T 1wdc_A 7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 49 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3456666666666666666532 24444555555554444
No 10
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.32 E-value=0.0069 Score=46.72 Aligned_cols=44 Identities=23% Similarity=0.114 Sum_probs=39.4
Q ss_pred hhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhc
Q 012650 149 KGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA 192 (459)
Q Consensus 149 kglVrLQalvRG~~vRrq~~~tlr~~qa~v~iQs~vRa~r~R~~ 192 (459)
.-++.+|+.+||+++|+.+...+...+|+..||..+|++...+.
T Consensus 7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~ 50 (64)
T 1wdc_A 7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 50 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 45889999999999999999988889999999999999877654
No 11
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.30 E-value=0.0063 Score=46.89 Aligned_cols=41 Identities=24% Similarity=0.064 Sum_probs=21.5
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhhhhh
Q 012650 151 IVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQK 191 (459)
Q Consensus 151 lVrLQalvRG~~vRrq~~~tlr~~qa~v~iQs~vRa~r~R~ 191 (459)
++.+|+.+||+++|+.+...+...+|+..||..+|++..++
T Consensus 7 ~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 7 VKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 44445555555555555444455555556666666554443
No 12
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=96.25 E-value=0.0043 Score=56.24 Aligned_cols=35 Identities=26% Similarity=0.469 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHH-HhhhHHHHHHHh
Q 012650 124 IRQLAATRIQSIFRGYLARKALR-ALKGIVKLQALI 158 (459)
Q Consensus 124 ~ee~AAi~IQsafRGylARralr-alkglVrLQalv 158 (459)
-...|+|+||++.||||+|+.++ .+.|++++.+|.
T Consensus 43 yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L~ 78 (148)
T 3gn4_A 43 YRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTLK 78 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 35677899999999999999999 889999997764
No 13
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.25 E-value=0.0048 Score=47.53 Aligned_cols=41 Identities=22% Similarity=0.190 Sum_probs=34.4
Q ss_pred HHHHHHHHHhhhhHHHHHHHHh----hhHHHHHHHhhhhHHHHHH
Q 012650 127 LAATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRRQA 167 (459)
Q Consensus 127 ~AAi~IQsafRGylARralral----kglVrLQalvRG~~vRrq~ 167 (459)
...+.||+..||||+|+.|..+ .++..||.=+|++..++.-
T Consensus 5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w 49 (63)
T 2bl0_A 5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW 49 (63)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 4569999999999999999844 4777889999998887754
No 14
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=96.08 E-value=0.0064 Score=68.23 Aligned_cols=42 Identities=36% Similarity=0.408 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHh----hhHHHHHHHhhhhHHHHHH
Q 012650 126 QLAATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRRQA 167 (459)
Q Consensus 126 e~AAi~IQsafRGylARralral----kglVrLQalvRG~~vRrq~ 167 (459)
..+|+.||+.+||||+|+.|+.+ .+++.||.-+||+++||..
T Consensus 779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~ 824 (837)
T 1kk8_A 779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 824 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence 34679999999999999999855 5788888888888888776
No 15
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=93.91 E-value=0.046 Score=63.20 Aligned_cols=41 Identities=29% Similarity=0.245 Sum_probs=36.2
Q ss_pred HHHHHHHHHhhhhHHHHHHHHh----hhHHHHHHHhhhhHHHHHH
Q 012650 127 LAATRIQSIFRGYLARKALRAL----KGIVKLQALIRGRNVRRQA 167 (459)
Q Consensus 127 ~AAi~IQsafRGylARralral----kglVrLQalvRG~~vRrq~ 167 (459)
.+++.||+.+|||++|+.|..+ .+++.||..+||+..+|..
T Consensus 793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~ 837 (1184)
T 1i84_S 793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW 837 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5679999999999999999854 4899999999999998764
No 16
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=91.78 E-value=0.13 Score=47.51 Aligned_cols=27 Identities=26% Similarity=0.434 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 012650 121 EKEIRQLAATRIQSIFRGYLARKALRA 147 (459)
Q Consensus 121 ~~~~ee~AAi~IQsafRGylARralra 147 (459)
....|+.||+.||.+||.|+.|+.++.
T Consensus 125 ~~~~e~~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 125 RRKHEEVSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 456789999999999999999988764
No 17
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=90.56 E-value=0.41 Score=53.76 Aligned_cols=44 Identities=23% Similarity=0.114 Sum_probs=38.9
Q ss_pred hhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhc
Q 012650 149 KGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA 192 (459)
Q Consensus 149 kglVrLQalvRG~~vRrq~~~tlr~~qa~v~iQs~vRa~r~R~~ 192 (459)
+.++.||+.+||++.|+++...+....|++.||..+|++..++.
T Consensus 780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~ 823 (837)
T 1kk8_A 780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 823 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 35788999999999999998777778999999999999988765
No 18
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=84.49 E-value=1.4 Score=50.91 Aligned_cols=44 Identities=27% Similarity=0.177 Sum_probs=38.6
Q ss_pred hhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhc
Q 012650 149 KGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA 192 (459)
Q Consensus 149 kglVrLQalvRG~~vRrq~~~tlr~~qa~v~iQs~vRa~r~R~~ 192 (459)
..++.||+.+||++.|+.+...+....+++.||+.+|++..++.
T Consensus 793 ~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~ 836 (1184)
T 1i84_S 793 DVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH 836 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45789999999999999998777778999999999999977653
No 19
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=83.84 E-value=0.76 Score=51.39 Aligned_cols=25 Identities=36% Similarity=0.573 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhh
Q 012650 126 QLAATRIQSIFRGYLARKALRALKG 150 (459)
Q Consensus 126 e~AAi~IQsafRGylARralralkg 150 (459)
..+|+.||+.+||||+|+.|+.++.
T Consensus 768 ~~~~~~iQ~~~Rg~l~R~~~~~~r~ 792 (795)
T 1w7j_A 768 RAACIRIQKTIRGWLMRKKYMRMRR 792 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999997653
No 20
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=74.40 E-value=3.5 Score=47.48 Aligned_cols=41 Identities=12% Similarity=0.084 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHh-hhHHHHHHHhhhhHHHHHH
Q 012650 126 QLAATRIQSIFRGYLARKALRAL-KGIVKLQALIRGRNVRRQA 167 (459)
Q Consensus 126 e~AAi~IQsafRGylARralral-kglVrLQalvRG~~vRrq~ 167 (459)
+.+|+.||. +||||+|+.|+.+ ++.+.+|.+-|+...|+..
T Consensus 775 ~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~ 816 (1052)
T 4anj_A 775 DHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEA 816 (1052)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 456777775 6999999999854 4677888777776655544
No 21
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=50.90 E-value=28 Score=31.35 Aligned_cols=20 Identities=25% Similarity=0.270 Sum_probs=17.8
Q ss_pred hhHHHHHHHhhhhHHHHHHH
Q 012650 149 KGIVKLQALIRGRNVRRQAF 168 (459)
Q Consensus 149 kglVrLQalvRG~~vRrq~~ 168 (459)
..++++|..|||+++|++..
T Consensus 46 ~~~i~iQktvR~~L~rkkhk 65 (148)
T 3gn4_A 46 EACIKMQKTIRMWLCKRRHK 65 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 47889999999999999994
No 22
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=27.33 E-value=35 Score=22.16 Aligned_cols=19 Identities=37% Similarity=0.422 Sum_probs=15.7
Q ss_pred HHHHHHHHhhhhHHHHHHH
Q 012650 128 AATRIQSIFRGYLARKALR 146 (459)
Q Consensus 128 AAi~IQsafRGylARralr 146 (459)
|...||-.||.|..|+.-.
T Consensus 4 at~LIqdyfRkfkkrke~~ 22 (26)
T 2f3y_B 4 ATFLIQEYFRKFKKRKEQX 22 (26)
T ss_pred hhhhHHHHHHHHHHhHHhh
Confidence 5678999999999988643
No 23
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=25.17 E-value=27 Score=22.19 Aligned_cols=17 Identities=18% Similarity=0.178 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhhhhHHH
Q 012650 126 QLAATRIQSIFRGYLAR 142 (459)
Q Consensus 126 e~AAi~IQsafRGylAR 142 (459)
--|+..||-.||-+..|
T Consensus 6 iYA~llI~d~~r~~k~r 22 (23)
T 3dvk_B 6 IYAAMMIMDYYKQSKVK 22 (26)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 47899999999998876
No 24
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=24.97 E-value=50 Score=23.14 Aligned_cols=21 Identities=33% Similarity=0.388 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhhhhHHHHHH
Q 012650 125 RQLAATRIQSIFRGYLARKAL 145 (459)
Q Consensus 125 ee~AAi~IQsafRGylARral 145 (459)
+--|...||-.||-|..|+.-
T Consensus 10 KfYatfLIQdyFRkfkkrke~ 30 (37)
T 2be6_D 10 KFYATFLIQEYFRKFKKRKEQ 30 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 346789999999999999865
No 25
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=23.68 E-value=1e+02 Score=35.65 Aligned_cols=43 Identities=2% Similarity=-0.098 Sum_probs=28.8
Q ss_pred HhhhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhc
Q 012650 147 ALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKA 192 (459)
Q Consensus 147 alkglVrLQalvRG~~vRrq~~~tlr~~qa~v~iQs~vRa~r~R~~ 192 (459)
.+..++.+|..+||.++|+++.. -.++++.||...|.++.|..
T Consensus 773 ~~~~~~~~iq~~r~~l~r~~~~k---~~~~a~~i~~~~r~~~~r~~ 815 (1052)
T 4anj_A 773 DPDHLAELVKRVNHWLICSRWKK---VQWCSLSVIKLKNKIKYRAE 815 (1052)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 35566667667999999999943 34566666666565554443
No 26
>3bxl_B CAM, voltage-dependent R-type calcium channel subunit alpha-1E peptide; ION channel, calmodulin, IQ domain, facillitation, inactivation; 2.30A {Rattus norvegicus} PDB: 3bxk_B
Probab=20.87 E-value=60 Score=21.14 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=16.1
Q ss_pred HHHHHHHHHhhhhHHHHH
Q 012650 127 LAATRIQSIFRGYLARKA 144 (459)
Q Consensus 127 ~AAi~IQsafRGylARra 144 (459)
-||..||-.||-+..||.
T Consensus 3 YAa~mI~e~yrq~K~~r~ 20 (26)
T 3bxl_B 3 YAAMMIMDYYKQSKVKKQ 20 (26)
T ss_pred hHHHHHHHHHHHHHhhhh
Confidence 589999999999999875
Done!