Query 012651
Match_columns 459
No_of_seqs 161 out of 1072
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 13:35:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012651.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012651hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3szr_A Interferon-induced GTP- 100.0 8.4E-73 2.9E-77 609.8 36.3 426 2-456 159-607 (608)
2 3zvr_A Dynamin-1; hydrolase, D 100.0 3.4E-63 1.2E-67 539.0 37.5 451 3-458 163-768 (772)
3 3ljb_A Interferon-induced GTP- 100.0 1.9E-36 6.3E-41 291.5 21.6 258 170-431 2-271 (271)
4 3t34_A Dynamin-related protein 99.9 1.7E-25 6E-30 226.5 12.0 173 3-175 149-332 (360)
5 2x2e_A Dynamin-1; nitration, h 99.9 6.4E-23 2.2E-27 207.2 16.7 189 3-191 143-344 (353)
6 1jwy_B Dynamin A GTPase domain 99.5 1.4E-13 5E-18 135.7 12.1 158 6-163 147-315 (315)
7 2aka_B Dynamin-1; fusion prote 99.4 9.5E-13 3.3E-17 128.6 12.6 148 6-153 141-299 (299)
8 2j69_A Bacterial dynamin-like 87.4 2.4 8.1E-05 45.9 10.5 46 17-62 191-246 (695)
9 2esy_A LUNG surfactant protein 37.9 17 0.00058 22.0 1.7 24 111-134 2-26 (32)
10 2w9y_A CE-FAR-7, fatty acid/re 33.7 1.3E+02 0.0045 25.2 7.2 61 134-201 51-111 (140)
11 4b6x_A AVRRPS4, avirulence pro 25.9 1.9E+02 0.0066 21.7 6.1 39 125-163 36-74 (90)
12 1use_A VAsp, vasodilator-stimu 25.7 1.4E+02 0.0049 19.8 4.8 34 128-164 10-43 (45)
13 1txp_A HnRNP C, heterogeneous 21.2 1.2E+02 0.0041 17.9 3.3 21 137-157 3-23 (28)
No 1
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=100.00 E-value=8.4e-73 Score=609.78 Aligned_cols=426 Identities=18% Similarity=0.266 Sum_probs=372.2
Q ss_pred ccCCCCCChhhHHHHHHHHHHHHhcCC------CCC-----cHHHHHHHHhcCCCCCccceeccCCCccCCcch--HHHh
Q 012651 2 KLAREVDPTGTVHLLSSVVKLYILCRK------LSS-----NLILSYKLIERTVAGERTFGVLTKLDLMDKGTN--ALDV 68 (459)
Q Consensus 2 ~v~~~~q~~~~~~~V~~lv~~Yi~~~~------~p~-----n~~i~~~a~~vDp~g~RTiGVlTK~D~~d~g~~--~~~i 68 (459)
++++.|++++....|.+|+++|++++. +++ +......++++||.|.|||||+||+|++++|+. ++++
T Consensus 159 ~~~t~~LD~~~~~~i~~li~~~l~~~~~iil~vvt~~~d~a~~~~l~la~~v~~~g~rtI~VlTK~Dlv~~g~~~~~~~~ 238 (608)
T 3szr_A 159 RVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDV 238 (608)
T ss_dssp ----CCSSCSHHHHHHHHHHHHTTSSSCCEEEEEESSSCTTTCHHHHHHHHHCSSCCSEEEEEECGGGSSSSSTTCCCCC
T ss_pred ccccCCCCHHHHHHHHHHHHHHHhcCCCCceEEEeccchhccHHHHHHHHHHhhcCCceEEEecchhhcCcccHHHHHHH
Confidence 355899999999999999999999874 233 344566799999999999999999999999985 7899
Q ss_pred HhCCccccCCCEEEEEcCChhhhhccccHHHHHHHHHHHhccCCCCCCcc--CCCChHHHHHHHHHHHHHHHHhhcHHHH
Q 012651 69 LEGRSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHLA--GKMGSEYLAKLLSKHLESVIRSRIPSIT 146 (459)
Q Consensus 69 l~~~~~~l~lG~~~v~nr~~~d~~~~~s~~~a~~~E~~fF~~~~~~~~~~--~~~G~~~L~~~L~~~L~~~i~~~LP~l~ 146 (459)
+.|+.++|++|||+|+||+|+|++.+.|+++|++.|.+||++||||+.+. +++||++|+.+|+++|.+||+++||.|+
T Consensus 239 l~~~~~~l~~g~~~v~nr~~~~~~~~~~~~~~~~~E~~fF~~~~~~~~~~~~~~~g~~~L~~~L~~~L~~~i~~~lP~l~ 318 (608)
T 3szr_A 239 VRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLPLLE 318 (608)
T ss_dssp C--CCSCCSSCEECCCCSCTTCTTTCCCHHHHTTTHHHHTTTCTTTSGGGGTCC---CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCcccccCceEEEEecCchhhcccCCCHHHHHHHHHHHHccCccccccCccccccHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999999999999999999999999999999999875 5999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHHHHHHHhhccCCCC---cchhhhhHhhhHHHHhccCCc---
Q 012651 147 SLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDRIFKEHLDGGRPG---GDRIYGVFDNQLPAALRKLPF--- 220 (459)
Q Consensus 147 ~~i~~~l~~~~~eL~~lg~~~~~~~~~~~~~l~~~~~~f~~~~~~~i~G~~~g---~~ri~~~f~~~f~~~~~~~~~--- 220 (459)
.+|+.+|++++.||+.||+++++++.+++.||++++++|++.++++++|++.. +.+++..+++.|..+...+..
T Consensus 319 ~~i~~~l~~~~~el~~lg~~~~~~~~~~~~~l~~~~~~f~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 398 (608)
T 3szr_A 319 NQIKETHQRITEELQKYGVDIPEDENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIENNFQ 398 (608)
T ss_dssp HHHHHHHHHHHHHHHTSCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCccccHHHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999988888888899999999999999999998743 256777777666655433211
Q ss_pred -cccCCchhHHHHhhhhcCCCCCCCCChhHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhcchhcccCchhHHHH
Q 012651 221 -DRHLSLQNVKKVVSEADGYQPHLIAPEQGYRRLIEGSLSYFRGPAEASADAVHFVLKELVRKSIGETQELKRFPTLQAE 299 (459)
Q Consensus 221 -~~~~~~~~i~~~i~~~~G~~p~~f~p~~~~~~li~~~i~~w~~pa~~~~~~V~~~l~~~v~~~~~~~~~~~~fp~L~~~ 299 (459)
.......+|++.+++++|+++++|.|+.+|+.++++|+++|++||..|++.|++.+..++..++. .+|.+||+|+++
T Consensus 399 ~~~~~~~~~i~~~~~~~~g~~~~~f~~~~~fe~lvk~qi~~l~~Pa~~~v~~V~~~v~~~~~~~~~--~~f~rfp~L~~~ 476 (608)
T 3szr_A 399 EGHKILSRKIQKFENQAAAAELPGFVNYRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFTDVSI--KNFEEFFNLHRT 476 (608)
T ss_dssp HHHHHHHHHHHHHHHHCCSCSSSCSSCTHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHH--HHHSSCHHHHHH
T ss_pred ccchhHHHHHHHHHHHccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhhHHHHH
Confidence 11234678999999999999999999999999999999999999999999999999999998775 489999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHH-HhhhchHHHHhhCCCCCCCCCCCCcccCCCchHHHHHHHHHHHHH
Q 012651 300 IAAAANEALERFRDEGRKTVIRLVDMEASYLTVE-FFRKLPQEVEKAGNPGNSGNTASQAVDRYSDGHFRRIGSNVSSYV 378 (459)
Q Consensus 300 v~~~~~~~L~~~~~~~~~~v~~li~~E~~~~~~d-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~aYy 378 (459)
+.+++.++++++.++|+++|..+++||..||+.| +|.. ....+.+|+.+|.|||
T Consensus 477 ~~~~i~~~~~~~~~~a~~~i~~li~mE~~~~~~d~~~~~-------------------------~~~~~~ei~~~l~sY~ 531 (608)
T 3szr_A 477 AKSKIEDIRAEQEREGEKLIRLHFQMEQIVYGAFQSSSA-------------------------TDSSMEEIFQHLMAYH 531 (608)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----------------------------------CTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccC-------------------------CCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999998765 3320 0111357999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcHHHHhhhhCCCHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 012651 379 GMVSETLRTTIPKAIVYCQVREAKLSLLNHFYTQIGRKEAKQLGQLLDEDPAMMERRLQCAKRLELYKAARDEIDSVS 456 (459)
Q Consensus 379 ~ia~kr~~D~Vp~~I~~~Lv~~~~~~l~~~l~~~L~~~~~~~~~~Ll~E~~~i~~~R~~L~~~~~~L~~A~~~L~~i~ 456 (459)
+||++||+|+|||+|+|+||+.+.+.|+.+|++.|+. .+.+++||+|||+++++|+.|++++++|++|+++|..|.
T Consensus 532 ~iv~~~~~D~vP~~I~~~lv~~~~~~lq~~l~~~l~~--~~~~~~ll~E~~~~~~~R~~l~~~~~~L~~A~~~l~~~~ 607 (608)
T 3szr_A 532 QEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLLQD--KDTYSWLLKERSDTSDKRKFLKERLARLTQARRRLAQFP 607 (608)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTTC--HHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhc--chhHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999995 478999999999999999999999999999999999874
No 2
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=100.00 E-value=3.4e-63 Score=538.97 Aligned_cols=451 Identities=25% Similarity=0.417 Sum_probs=381.3
Q ss_pred cCCCCCChhhHHHHHHHHHHHHhcCC------C-----CCcHHHHHHHHhcCCCCCccceeccCCCccCCcchHHHhHhC
Q 012651 3 LAREVDPTGTVHLLSSVVKLYILCRK------L-----SSNLILSYKLIERTVAGERTFGVLTKLDLMDKGTNALDVLEG 71 (459)
Q Consensus 3 v~~~~q~~~~~~~V~~lv~~Yi~~~~------~-----p~n~~i~~~a~~vDp~g~RTiGVlTK~D~~d~g~~~~~il~~ 71 (459)
+++.+||.++++.+.+++.+|+.++. + +.+.+....++.+++.|.+||+|+||+|+++++..+.+++.+
T Consensus 163 ~~~~~qp~di~~~i~~lv~~yi~~~aDlIL~VVDAs~~~~~~d~l~ll~~L~~~g~pvIlVlNKiDlv~~~~~~~~il~~ 242 (772)
T 3zvr_A 163 VPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDARDVLEN 242 (772)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHTSTTEEEEEEEETTSCSSSCHHHHHHHHHCTTCSSEEEEEECTTSSCTTCCSHHHHTT
T ss_pred CCCCCCcHHHHHHHHHHHHHHHhcCCcEEEEEEcCCCCcchhHHHHHHHHHHhcCCCEEEEEeCcccCCcchhhHHHHHH
Confidence 45678999999999999999998652 1 223444456889999999999999999999988877788888
Q ss_pred CccccCCCEEEEEcCChhhhhccccHHHHHHHHHHHhccCCCCCCccCCCChHHHHHHHHHHHHHHHHhhcHHHHHHHHH
Q 012651 72 RSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHLAGKMGSEYLAKLLSKHLESVIRSRIPSITSLINK 151 (459)
Q Consensus 72 ~~~~l~lG~~~v~nr~~~d~~~~~s~~~a~~~E~~fF~~~~~~~~~~~~~G~~~L~~~L~~~L~~~i~~~LP~l~~~i~~ 151 (459)
+.+++++||+.|++.|+.+...-..+.++...|..||..+|+|..+.+++|+..|++.|++.|..||+++||.|+.+|+.
T Consensus 243 ~~~~l~lg~~~VV~iSA~~G~GvdeL~eaI~~e~~ffpe~P~yd~ltDr~g~~~LaEiLrEkL~~hi~~ELP~l~~~I~~ 322 (772)
T 3zvr_A 243 KLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQS 322 (772)
T ss_dssp CSSCCSSCEEECCCCCCEESSSSEEHHHHHHHHHHHHHHCTTTGGGGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhhccCCceEEecccccccchhHHHHHHHHHHhccCCcchhhhhhcccHHHHHHHHHHHHHHHHHhhCccHHHHHHH
Confidence 88899999999999999887777789999999999999999998888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHHHHHHHhhccCC--------CCcchhhhhHhhhHHHHhccCCcccc
Q 012651 152 SIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDRIFKEHLDGGR--------PGGDRIYGVFDNQLPAALRKLPFDRH 223 (459)
Q Consensus 152 ~l~~~~~eL~~lg~~~~~~~~~~~~~l~~~~~~f~~~~~~~i~G~~--------~g~~ri~~~f~~~f~~~~~~~~~~~~ 223 (459)
+++.+..++++||+++++++.++..+|+++++.|++.|.++++|.+ +||+||+++|++.|+..+..+++++.
T Consensus 323 ~l~s~~vele~~~~~~~~~~~~~~~~ll~~~~~f~~~~~~~i~G~~~~~~~~el~ggari~~if~~~f~~~~~~~~~~~~ 402 (772)
T 3zvr_A 323 QLLSIEKEVDEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEK 402 (772)
T ss_dssp HHHHHHHHHHHHHHHCCCSSSCSHHHHHHHHHHHHHHHHHHHTC---------CCHHHHHHHHHHTHHHHHHHTTSCCHH
T ss_pred HHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcccCCCCeeeehhHHHHhHHHHhcCCCchh
Confidence 9999999999999988888777777899999999999999999988 58999999999999999999999999
Q ss_pred CCchhHHHHhhhhcCCCCCCCCChhHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhcchhcccCchhHHHHHHHH
Q 012651 224 LSLQNVKKVVSEADGYQPHLIAPEQGYRRLIEGSLSYFRGPAEASADAVHFVLKELVRKSIGETQELKRFPTLQAEIAAA 303 (459)
Q Consensus 224 ~~~~~i~~~i~~~~G~~p~~f~p~~~~~~li~~~i~~w~~pa~~~~~~V~~~l~~~v~~~~~~~~~~~~fp~L~~~v~~~ 303 (459)
+++++|+++|+|++|++||+|+|+.+|+.|+++|+++|++||.+|++.|++.+..++.+|. .+|.+||.|++++.++
T Consensus 403 ~~~~~I~~~i~n~~G~~~~lf~p~~~fe~LVk~QI~rl~ePsl~CVdlV~~eL~~iv~~~~---~~l~RfP~Lr~ei~~i 479 (772)
T 3zvr_A 403 ELRREISYAIKNIHDIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELTSTIRKCS---EKLQQYPRLREEMERI 479 (772)
T ss_dssp HHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHG---GGGTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999985 3899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCHHH--hhh---chH----HHHh--hCCC----------------CC------
Q 012651 304 ANEALERFRDEGRKTVIRLVDMEASYLTVEF--FRK---LPQ----EVEK--AGNP----------------GN------ 350 (459)
Q Consensus 304 ~~~~L~~~~~~~~~~v~~li~~E~~~~~~d~--~~~---~~~----~~~k--~~~~----------------~~------ 350 (459)
+.++|+++..+|+++|..|+++|.+||||+| |-. ..+ ...+ .++. +.
T Consensus 480 v~~~Lre~~~~t~~~V~~LId~E~ayintnHpdf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 559 (772)
T 3zvr_A 480 VTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFIGFANAQQRSNQMNKKKTSGNQDEILVIRKGWLTINNIGIMKGGSK 559 (772)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCTTCTTCCCC---------------------CCEEEEEEEEESSSCCC---CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhhchHHHHHHHHHHhhcccccCCccccceeeeeeeecccccccCCCc
Confidence 9999999999999999999999999999964 321 110 0000 0000 00
Q ss_pred ---------------C-----------------------C--------------CC------------------------
Q 012651 351 ---------------S-----------------------G--------------NT------------------------ 354 (459)
Q Consensus 351 ---------------~-----------------------~--------------~~------------------------ 354 (459)
+ + ++
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 639 (772)
T 3zvr_A 560 EYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKAS 639 (772)
T ss_dssp EEEEEEESSEEEEESSTTCCCEEEEEECTTEEEEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHH
T ss_pred cceeeccccccccccchhhhcccccccccccccchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHh
Confidence 0 0 00
Q ss_pred ---C--CCcc--------c-----------CCCc---hHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 012651 355 ---A--SQAV--------D-----------RYSD---GHFRRIGSNVSSYVGMVSETLRTTIPKAIVYCQVREAKLSLLN 407 (459)
Q Consensus 355 ---~--~~~~--------~-----------~~~~---~~~~~i~~~l~aYy~ia~kr~~D~Vp~~I~~~Lv~~~~~~l~~ 407 (459)
+ .++. . ++++ .+++.|+.+|.|||.|++|++.|.|||+|||+||+.+.+.++.
T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~q~e~~~~l~~sy~~iv~k~~~d~~pk~im~~~vn~~k~~~~~ 719 (772)
T 3zvr_A 640 FLRAGVYPERVGDKEKASETEENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFS 719 (772)
T ss_dssp HHHTTCCBC------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hhhcccCCccccccccccccCCccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 0 0111 2467889999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcHHHHhhhhCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Q 012651 408 HFYTQIGRKEAKQLGQLLDEDPAMMERRLQCAKRLELYKAARDEIDSVSWA 458 (459)
Q Consensus 408 ~l~~~L~~~~~~~~~~Ll~E~~~i~~~R~~L~~~~~~L~~A~~~L~~i~~~ 458 (459)
+|+..||.. +.+..||+|+|++++||++|.+++++|++|+.+|..|.++
T Consensus 720 el~~~ly~~--~~~~~lm~Es~~~~~~r~~~~~~~~~l~~a~~ii~~i~~~ 768 (772)
T 3zvr_A 720 ELLANLYSC--GDQNTLMEESAEQAQRRDEMLRMYHALKEALSIIGDINTT 768 (772)
T ss_dssp THHHHHHHT--CCTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHhcc--cCHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999985 4689999999999999999999999999999999998764
No 3
>3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=291.46 Aligned_cols=258 Identities=12% Similarity=0.165 Sum_probs=190.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhccCC---CCcchhhhhHhhhHHHHhccCCccccCC----chhHHHHhhhhcCCCCC
Q 012651 170 DAGAQLYTILELCRAFDRIFKEHLDGGR---PGGDRIYGVFDNQLPAALRKLPFDRHLS----LQNVKKVVSEADGYQPH 242 (459)
Q Consensus 170 ~~~~~~~~l~~~~~~f~~~~~~~i~G~~---~g~~ri~~~f~~~f~~~~~~~~~~~~~~----~~~i~~~i~~~~G~~p~ 242 (459)
++.++++||++.++.|.+.+.+++.|+. .|+.|++..+++.|..|...++...... .++|....++.+|+++|
T Consensus 2 ~~~e~~~FLidkI~~F~~di~~l~~Gee~~~~~~~rlf~~lr~eF~~w~~~l~~~~~~~~~~i~~ev~~~e~~~rGrELP 81 (271)
T 3ljb_A 2 DENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFENQYRGRELP 81 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCceecccCCcchHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHccCcccC
Confidence 3567899999999999999999999987 4568999999999999876543221111 24666677899999988
Q ss_pred CCCChhHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhcchhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012651 243 LIAPEQGYRRLIEGSLSYFRGPAEASADAVHFVLKELVRKSIGETQELKRFPTLQAEIAAAANEALERFRDEGRKTVIRL 322 (459)
Q Consensus 243 ~f~p~~~~~~li~~~i~~w~~pa~~~~~~V~~~l~~~v~~~~~~~~~~~~fp~L~~~v~~~~~~~L~~~~~~~~~~v~~l 322 (459)
.|+|+.+|+.+|++|++.|++||..|++.|++.+...+..++. .+|++||+|++.+.+.+.+++.++..+|+++|+++
T Consensus 82 gFv~y~aFE~lVk~qI~~LeePAl~cl~~V~e~l~~~~~~i~~--~~F~rFpnL~~~i~~~i~~i~~~~~~~Ae~~I~~~ 159 (271)
T 3ljb_A 82 GFVNYRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFTDVSI--KNFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLH 159 (271)
T ss_dssp -CTTHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH--HHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999998875 59999999999999999999999999999999999
Q ss_pred HHhhhcCCCHH-HhhhchHHHH-hhCCCC--CCCCCCCCcccCCCc-hHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 012651 323 VDMEASYLTVE-FFRKLPQEVE-KAGNPG--NSGNTASQAVDRYSD-GHFRRIGSNVSSYVGMVSETLRTTIPKAIVYCQ 397 (459)
Q Consensus 323 i~~E~~~~~~d-~~~~~~~~~~-k~~~~~--~~~~~~~~~~~~~~~-~~~~~i~~~l~aYy~ia~kr~~D~Vp~~I~~~L 397 (459)
++||..+||+| .|....+.++ +...+. ....+.+........ ..+.+|+.++.|||+||++|++|+|||+|+++|
T Consensus 160 ~~mE~~vytqD~~Y~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ei~~~l~sYf~i~~~rl~d~IP~~I~~~l 239 (271)
T 3ljb_A 160 FQMEQIVYCQDQVYRGALQKVREKELEEEKKKKSWDFGAFQSSSATDSSMEEIFQHLMAYHQEASKRISSHIPLIIQFFM 239 (271)
T ss_dssp HHHHTSCC----------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccccCCHHHHHHHHHHHHHHhcccccccccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 99999877765 4543332222 111110 000000000111123 457899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcHHHHhhhhCCCHHH
Q 012651 398 VREAKLSLLNHFYTQIGRKEAKQLGQLLDEDPAM 431 (459)
Q Consensus 398 v~~~~~~l~~~l~~~L~~~~~~~~~~Ll~E~~~i 431 (459)
|+.+.+.||.+|+..|+.. +.+.+||.|||++
T Consensus 240 l~~~~~~lQ~~ml~~l~~~--~~~~~LL~E~~d~ 271 (271)
T 3ljb_A 240 LQTYGQQLQKAMLQLLQDK--DTYSWLLKERSDT 271 (271)
T ss_dssp THHHHHHHHHHHHHTTSCG--GGHHHHTCCC---
T ss_pred HHHHHHHHHHHHHHHHhch--hhHHHHhcCCCCC
Confidence 9999999999999999964 7899999999975
No 4
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*
Probab=99.92 E-value=1.7e-25 Score=226.48 Aligned_cols=173 Identities=54% Similarity=0.837 Sum_probs=144.8
Q ss_pred cCCCCCChhhHHHHHHHHHHHHhcCC------CCCc-----HHHHHHHHhcCCCCCccceeccCCCccCCcchHHHhHhC
Q 012651 3 LAREVDPTGTVHLLSSVVKLYILCRK------LSSN-----LILSYKLIERTVAGERTFGVLTKLDLMDKGTNALDVLEG 71 (459)
Q Consensus 3 v~~~~q~~~~~~~V~~lv~~Yi~~~~------~p~n-----~~i~~~a~~vDp~g~RTiGVlTK~D~~d~g~~~~~il~~ 71 (459)
.+..+|+.++...+.+++..|+.++. .++| ......++++++.|.|||+|+||+|++++++.+.+++.+
T Consensus 149 ~~~~~q~~~~~~~~~~~~~~~i~~~d~iilvv~~~~~~~~~~~~~~l~~~~~~~~~~~i~V~nK~Dl~~~~~~~~~~~~~ 228 (360)
T 3t34_A 149 VAVDGQSDSIVKDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTFGVLTKIDLMDKGTDAVEILEG 228 (360)
T ss_dssp SCCTTCCSSHHHHHHHHHHHHHHSSSEEEEEEEETTSCGGGCHHHHHHHHSCTTCTTEEEEEECGGGCCTTCCSHHHHTT
T ss_pred CCcCCCchhHHHHHHHHHHHHhhcCCeEEEEeecccCCcCCHHHHHHHHHhcccCCCEEEEEeCCccCCCcccHHHHHcC
Confidence 34568899999999999999999975 1332 333556899999999999999999999988888999999
Q ss_pred CccccCCCEEEEEcCChhhhhccccHHHHHHHHHHHhccCCCCCCccCCCChHHHHHHHHHHHHHHHHhhcHHHHHHHHH
Q 012651 72 RSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHLAGKMGSEYLAKLLSKHLESVIRSRIPSITSLINK 151 (459)
Q Consensus 72 ~~~~l~lG~~~v~nr~~~d~~~~~s~~~a~~~E~~fF~~~~~~~~~~~~~G~~~L~~~L~~~L~~~i~~~LP~l~~~i~~ 151 (459)
...++++||++|.|+++.+++...++.+++..|..||++||+|+.+.+++|+++|+.+|+++|.+||+++||.|+.+|+.
T Consensus 229 ~~~~~~~~~~~v~~~s~~~i~~~~~~~~~~~~e~~ff~~~~~~~~~~~~~g~~~L~~~l~~~l~~~i~~~lp~l~~~i~~ 308 (360)
T 3t34_A 229 RSFKLKYPWVGVVNRSQADINKNVDMIAARKREREYFSNTTEYRHLANKMGSEHLAKMLSKHLERVIKSRIPGIQSLINK 308 (360)
T ss_dssp SSSCCSSCCEEECCCCHHHHHTTCCHHHHHHHHHHHHTTCTTTGGGGGGCSHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred ccccccCCeEEEEECChHHhccCCCHHHHHHHHHHHhcCCCccccchhhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHH
Q 012651 152 SIEELESEMDHLGRPIAVDAGAQL 175 (459)
Q Consensus 152 ~l~~~~~eL~~lg~~~~~~~~~~~ 175 (459)
.+++++.+|.+||+++++++.+++
T Consensus 309 ~l~~~~~~l~~lg~~~~~~~~~~~ 332 (360)
T 3t34_A 309 TVLELETELSRLGKPIAHGTDSRV 332 (360)
T ss_dssp HHTTTTCC----------------
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHH
Confidence 999999999999999998776543
No 5
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A
Probab=99.89 E-value=6.4e-23 Score=207.15 Aligned_cols=189 Identities=30% Similarity=0.486 Sum_probs=167.5
Q ss_pred cCCCCCChhhHHHHHHHHHHHHhcCC------CCC-----cHHHHHHHHhcCCCCCccceeccCCCccCCcchHHHhHhC
Q 012651 3 LAREVDPTGTVHLLSSVVKLYILCRK------LSS-----NLILSYKLIERTVAGERTFGVLTKLDLMDKGTNALDVLEG 71 (459)
Q Consensus 3 v~~~~q~~~~~~~V~~lv~~Yi~~~~------~p~-----n~~i~~~a~~vDp~g~RTiGVlTK~D~~d~g~~~~~il~~ 71 (459)
+++.+||.++.+.+++|+..|+.+.. +++ +.+....++.+||.|.|||+|+||+|++++++++.+++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iiL~v~~a~~~~~~~~~~~i~~~~~~~~~~~i~V~NK~Dl~~~~~~~~~~~~~ 222 (353)
T 2x2e_A 143 VPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKVAKEVDPQGQRTIGVITKLDLMDEGTDARDVLEN 222 (353)
T ss_dssp SCCTTCCTTHHHHHHHHHHHHHTSTTEEEEEEEETTSCGGGCHHHHHHHHHCTTCTTEEEEEECGGGSCTTCCCHHHHTT
T ss_pred CccCCCchhHHHHHHHHHHHHHcCCCeEEEEEecCCCccchhHHHHHHHHhCcCCCceEEEeccccccCcchhHHHHHhC
Confidence 45678899999999999999999764 133 2333446899999999999999999999988777888999
Q ss_pred CccccCCCEEEEEcCChhhhhccccHHHHHHHHHHHhccCCCCCCccCCCChHHHHHHHHHHHHHHHHhhcHHHHHHHHH
Q 012651 72 RSYRLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHLAGKMGSEYLAKLLSKHLESVIRSRIPSITSLINK 151 (459)
Q Consensus 72 ~~~~l~lG~~~v~nr~~~d~~~~~s~~~a~~~E~~fF~~~~~~~~~~~~~G~~~L~~~L~~~L~~~i~~~LP~l~~~i~~ 151 (459)
+.+++++||+.|.+.|+.+...-..+.++...|..||.+++.|.+.+.++|+..|++.|++.|..||+++||.++.+|+.
T Consensus 223 ~~~~l~~~~~~v~~~SA~~~~~i~~l~~~l~~e~~~f~~~~~~~~~~~r~~~~~l~~~l~e~l~~~i~~~lP~l~~~i~~ 302 (353)
T 2x2e_A 223 KLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQS 302 (353)
T ss_dssp CSSCCTTCEEECCCCCHHHHHTTCCHHHHHHHHHHHHHHCTTTGGGGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCceEEEeCCcccccccccHHHHHHHHHHHhccCCcccccHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988777788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCChhHH--HHHHHHHHHHHHHHHHH
Q 012651 152 SIEELESEMDHLGRPIAVDAGAQ--LYTILELCRAFDRIFKE 191 (459)
Q Consensus 152 ~l~~~~~eL~~lg~~~~~~~~~~--~~~l~~~~~~f~~~~~~ 191 (459)
++..++.+|..||+++++++.++ +++|+++++.|++.|+.
T Consensus 303 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 344 (353)
T 2x2e_A 303 QLLSIEKEVEEYKNFRPDKHGTDSRVDEMLRMYHALKEALSI 344 (353)
T ss_dssp HHHHHHHHHHHHHHHCCCSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCchhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999998877765543 37899999999998865
No 6
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*
Probab=99.48 E-value=1.4e-13 Score=135.66 Aligned_cols=158 Identities=34% Similarity=0.500 Sum_probs=125.9
Q ss_pred CCCChhhHHHHHHHHHHHHhcCCC------CCc-----HHHHHHHHhcCCCCCccceeccCCCccCCcchHHHhHhCCcc
Q 012651 6 EVDPTGTVHLLSSVVKLYILCRKL------SSN-----LILSYKLIERTVAGERTFGVLTKLDLMDKGTNALDVLEGRSY 74 (459)
Q Consensus 6 ~~q~~~~~~~V~~lv~~Yi~~~~~------p~n-----~~i~~~a~~vDp~g~RTiGVlTK~D~~d~g~~~~~il~~~~~ 74 (459)
.+|+..+.+....++..|++.... +++ ......++.+++.|.++|.|+||+|+++++.++.+.+.+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~d~iilvvd~~~~~~~~~~~~~i~~~~~~~~~~~i~v~NK~Dl~~~~~~~~~~~~~~~~ 226 (315)
T 1jwy_B 147 GDQPTDIEQQIRRMVMAYIKKQNAIIVAVTPANTDLANSDALQLAKEVDPEGKRTIGVITKLDLMDKGTDAMEVLTGRVI 226 (315)
T ss_dssp -----CSHHHHHHHHHHHHHSTTEEEEEEEESSSCSTTCSHHHHHHHHCSSCSSEEEEEECTTSSCSSCCCHHHHTTSSS
T ss_pred CCCchhHHHHHHHHHHHHHcCCCeEEEEEEecCcchhhhHHHHHHHHhCCCCCcEEEEEcCcccCCcchHHHHHHhCCCc
Confidence 456778888999999999998641 211 122234677888999999999999999877656788887777
Q ss_pred ccCCCEEEEEcCChhhhhccccHHHHHHHHHHHhccCCCCCCccCCCChHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Q 012651 75 RLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHLAGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSIE 154 (459)
Q Consensus 75 ~l~lG~~~v~nr~~~d~~~~~s~~~a~~~E~~fF~~~~~~~~~~~~~G~~~L~~~L~~~L~~~i~~~LP~l~~~i~~~l~ 154 (459)
++++||+.|.+.+...++.+..+.+....+..||..+|+|.++..+.|+..|...|.+.+..|++++||.++.+|+..|+
T Consensus 227 ~~~~~~~~v~~~sa~~~~~~~gv~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lre~l~~~~~~elP~~~~~i~~~l~ 306 (315)
T 1jwy_B 227 PLTLGFIGVINRSQEDIIAKKSIRESLKSEILYFKNHPIYKSIANRSGTAYLSKTLNKLLMFHIRDTLPDLKVKVSKMLS 306 (315)
T ss_dssp CCTTCEEECCCCCHHHHSSSCCHHHHHHHHHHHHHTCTTGGGSGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCeEEEecCChhhhccCCCHHHHHHHHHHHHhCCCccccchhccCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 88899999999999988889999999999999999999898888999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 012651 155 ELESEMDHL 163 (459)
Q Consensus 155 ~~~~eL~~l 163 (459)
+++++|.+|
T Consensus 307 ~~~~~l~~~ 315 (315)
T 1jwy_B 307 DVQGELSTY 315 (315)
T ss_dssp ---------
T ss_pred HHHHHHHhC
Confidence 999999875
No 7
>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A*
Probab=99.41 E-value=9.5e-13 Score=128.60 Aligned_cols=148 Identities=34% Similarity=0.567 Sum_probs=125.3
Q ss_pred CCCChhhHHHHHHHHHHHHhcCC------CCC-----cHHHHHHHHhcCCCCCccceeccCCCccCCcchHHHhHhCCcc
Q 012651 6 EVDPTGTVHLLSSVVKLYILCRK------LSS-----NLILSYKLIERTVAGERTFGVLTKLDLMDKGTNALDVLEGRSY 74 (459)
Q Consensus 6 ~~q~~~~~~~V~~lv~~Yi~~~~------~p~-----n~~i~~~a~~vDp~g~RTiGVlTK~D~~d~g~~~~~il~~~~~ 74 (459)
.+|++++...+.+++..|+++.. +++ +..+...++.+++.|.++|+|+||+|+++++.++.+.+.+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~il~v~d~~~~~~~~~~~~~~~~~~~~~~~~i~V~NK~Dl~~~~~~~~~~~~~~~~ 220 (299)
T 2aka_B 141 GDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKIAKEVDPQGQRTIGVITKLDLMDEGTDARDVLENKLL 220 (299)
T ss_dssp SSSCTTHHHHHHHHHHHHHTSTTEEEEEEEESSSCGGGCHHHHHHHHHCTTCSSEEEEEECGGGSCTTCCCHHHHTTCSS
T ss_pred CCCCchHHHHHHHHHHHHHcCCCeEEEEEecCCcchhhhHHHHHHHHhCCCCCeEEEEEEccccCCCCchHHHHHhCCcC
Confidence 35688888899999999999864 122 2333345788899999999999999999877656778888777
Q ss_pred ccCCCEEEEEcCChhhhhccccHHHHHHHHHHHhccCCCCCCccCCCChHHHHHHHHHHHHHHHHhhcHHHHHHHHHHH
Q 012651 75 RLQHPWVGIVNRSQADINRNIDMIVARRKEREYFATSPDYGHLAGKMGSEYLAKLLSKHLESVIRSRIPSITSLINKSI 153 (459)
Q Consensus 75 ~l~lG~~~v~nr~~~d~~~~~s~~~a~~~E~~fF~~~~~~~~~~~~~G~~~L~~~L~~~L~~~i~~~LP~l~~~i~~~l 153 (459)
.+++||+.|.+.|..+...-..+-++...|..||..++.|.+.+.++|+..|.+.|.+.|..|++++||.+..+|+.+|
T Consensus 221 ~~~~~~~~v~~~SA~~~~gi~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~l~~~l~~~l~~~~~~~lP~~~~~i~~~~ 299 (299)
T 2aka_B 221 PLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQL 299 (299)
T ss_dssp CCTTCEEECCCCCCBCTTSCBCHHHHHHHHHHHHHHCTTTGGGGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCcEEEECCChhhccccccHHHHHHHHHHHHhcCCccccchhhhCHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhC
Confidence 8889999999999887655567778888999999888889999999999999999999999999999999999998763
No 8
>2j69_A Bacterial dynamin-like protein; FZO, FZL, GTPase, hydrolase; 3.0A {Nostoc punctiforme} PDB: 2j68_A 2w6d_A*
Probab=87.37 E-value=2.4 Score=45.86 Aligned_cols=46 Identities=11% Similarity=-0.021 Sum_probs=29.9
Q ss_pred HHHHHHHHhcCC-----CCC-----cHHHHHHHHhcCCCCCccceeccCCCccCCc
Q 012651 17 SSVVKLYILCRK-----LSS-----NLILSYKLIERTVAGERTFGVLTKLDLMDKG 62 (459)
Q Consensus 17 ~~lv~~Yi~~~~-----~p~-----n~~i~~~a~~vDp~g~RTiGVlTK~D~~d~g 62 (459)
..++..|+.+.. +++ ...+....+.+.+.|.++|.|+||+|+.+.+
T Consensus 191 ~~~~~~~i~~aD~vL~Vvda~~~~s~~e~~~l~~~l~~~~~~iiiVlNK~Dl~~~~ 246 (695)
T 2j69_A 191 NELSLGYVNNCHAILFVMRASQPCTLGERRYLENYIKGRGLTVFFLVNAWDQVRES 246 (695)
T ss_dssp HHHHTHHHHSSSEEEEEEETTSTTCHHHHHHHHHHTTTSCCCEEEEEECGGGGGGG
T ss_pred HHHHHHHHHhCCEEEEEEeCCCccchhHHHHHHHHHHhhCCCEEEEEECccccccc
Confidence 468889998753 111 1122222345666788899999999998654
No 9
>2esy_A LUNG surfactant protein C; lipid binding protein; NMR {Synthetic}
Probab=37.93 E-value=17 Score=22.04 Aligned_cols=24 Identities=29% Similarity=0.654 Sum_probs=17.8
Q ss_pred CCCCCCcc-CCCChHHHHHHHHHHH
Q 012651 111 SPDYGHLA-GKMGSEYLAKLLSKHL 134 (459)
Q Consensus 111 ~~~~~~~~-~~~G~~~L~~~L~~~L 134 (459)
.|.|+..+ +|+||+.---.|.++|
T Consensus 2 PPdYSa~P~grf~IPccp~~lKrLl 26 (32)
T 2esy_A 2 PPDYSAAPRGRFGIPFFPVHLKRLL 26 (32)
T ss_dssp CCCCCSCCCSSSSCCSTHHHHHHHH
T ss_pred CCccccCcCccccCccccccceeEE
Confidence 46799988 8999987555555554
No 10
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=33.74 E-value=1.3e+02 Score=25.22 Aligned_cols=61 Identities=11% Similarity=0.097 Sum_probs=48.7
Q ss_pred HHHHHHhhcHHHHHHHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHHHHHHHhhccCCCCcc
Q 012651 134 LESVIRSRIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRAFDRIFKEHLDGGRPGGD 201 (459)
Q Consensus 134 L~~~i~~~LP~l~~~i~~~l~~~~~eL~~lg~~~~~~~~~~~~~l~~~~~~f~~~~~~~i~G~~~g~~ 201 (459)
+..-++.-=|.|-..+.......+..+..|+| +.+. |+-+++..+...+.+.+.|.-..-.
T Consensus 51 ~i~alK~KSp~L~~K~~~l~~~lk~Ki~~L~P------eak~-Fv~kli~~~r~l~~~~~~G~k~~~~ 111 (140)
T 2w9y_A 51 MIDEVSKKHPELGKRLATVLEGNKKRLDGLSP------AAVE-YAKKLIHMVTTTLCSLTVGKPIDDA 111 (140)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHTTTTCCH------HHHH-HHHHHHHHHHHHHHHHHHTCCCCTH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHcCCH------HHHH-HHHHHHHHHHHHHHHHhcCCCCCHH
Confidence 34456678899999999999999999999963 4443 6899999999999999999754433
No 11
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=25.85 E-value=1.9e+02 Score=21.67 Aligned_cols=39 Identities=13% Similarity=0.283 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHHhc
Q 012651 125 YLAKLLSKHLESVIRSRIPSITSLINKSIEELESEMDHL 163 (459)
Q Consensus 125 ~L~~~L~~~L~~~i~~~LP~l~~~i~~~l~~~~~eL~~l 163 (459)
.+...|++.|.+-+...=|..+..-+..|.....+|..|
T Consensus 36 ~~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~qAraDL~~l 74 (90)
T 4b6x_A 36 LMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADL 74 (90)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHhHHHHHHHHHHHHHHH
Confidence 466678888888899999999999989999888888766
No 12
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=25.66 E-value=1.4e+02 Score=19.82 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHHhcC
Q 012651 128 KLLSKHLESVIRSRIPSITSLINKSIEELESEMDHLG 164 (459)
Q Consensus 128 ~~L~~~L~~~i~~~LP~l~~~i~~~l~~~~~eL~~lg 164 (459)
+++.+.+..-+++.|-.++.+| +.....||.+-|
T Consensus 10 e~~KqEIL~E~RkElqK~K~EI---IeAi~~El~~~~ 43 (45)
T 1use_A 10 QRVKQELLEEVKKELQKVKEEI---IEAFVQELRKRG 43 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhcC
Confidence 4566677777788888888777 455555665544
No 13
>1txp_A HnRNP C, heterogeneous nuclear ribonucleoprotein C protein; antiparallel four helix coiled coil tetramer HNRNPC, signaling protein; NMR {Homo sapiens}
Probab=21.21 E-value=1.2e+02 Score=17.95 Aligned_cols=21 Identities=24% Similarity=0.490 Sum_probs=16.2
Q ss_pred HHHhhcHHHHHHHHHHHHHHH
Q 012651 137 VIRSRIPSITSLINKSIEELE 157 (459)
Q Consensus 137 ~i~~~LP~l~~~i~~~l~~~~ 157 (459)
-|++.|-.|+..|...|...+
T Consensus 3 ~IkkELtQIK~kvDsLLe~Le 23 (28)
T 1txp_A 3 AIKKELTQIKQKVDSLLENLE 23 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 477888888888888877654
Done!