Query 012652
Match_columns 459
No_of_seqs 134 out of 1282
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 13:37:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012652.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012652hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.3E-68 1.5E-72 520.0 35.1 432 3-459 13-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.6E-64 9E-69 503.5 38.3 446 2-458 7-478 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 6.8E-61 2.3E-65 477.2 43.1 434 3-458 6-468 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 5.3E-61 1.8E-65 474.9 36.4 434 3-458 7-451 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.9E-59 1.7E-63 462.1 36.6 427 3-458 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.9E-46 1.3E-50 368.0 35.3 392 1-453 10-416 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.8E-44 6.1E-49 353.4 26.5 357 3-457 22-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.3E-43 4.3E-48 348.8 28.0 366 4-438 1-384 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 5.3E-43 1.8E-47 344.6 25.0 366 4-438 1-385 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.4E-41 4.9E-46 334.5 33.3 373 3-456 20-411 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 2.7E-41 9.3E-46 331.0 34.2 375 1-455 2-395 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 3.2E-41 1.1E-45 330.2 28.5 351 4-438 1-367 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 5.5E-40 1.9E-44 324.6 31.4 373 1-453 5-394 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 3.8E-40 1.3E-44 326.6 27.4 356 2-438 19-419 (441)
15 2p6p_A Glycosyl transferase; X 100.0 4.6E-39 1.6E-43 313.3 32.2 350 4-455 1-376 (384)
16 4fzr_A SSFS6; structural genom 100.0 7.9E-38 2.7E-42 306.0 22.0 341 3-438 15-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 9.5E-37 3.2E-41 298.3 25.5 353 3-457 20-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 4E-36 1.4E-40 293.2 26.5 351 3-453 1-383 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.5E-33 8.6E-38 275.3 29.4 357 3-455 20-405 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.6E-28 5.5E-33 236.2 26.3 340 2-457 1-354 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 1.2E-27 4E-32 204.9 14.9 164 259-438 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 2.3E-21 7.9E-26 186.7 23.8 336 1-456 2-353 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 2.9E-16 9.9E-21 143.4 15.5 115 273-400 156-273 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1.4E-15 4.9E-20 133.0 7.4 133 270-419 24-196 (224)
25 3okp_A GDP-mannose-dependent a 99.5 9.8E-13 3.4E-17 127.4 24.3 339 1-457 2-376 (394)
26 3ot5_A UDP-N-acetylglucosamine 99.5 8.7E-13 3E-17 128.0 17.0 347 1-457 25-392 (403)
27 3dzc_A UDP-N-acetylglucosamine 99.4 1E-12 3.4E-17 127.3 15.1 138 273-431 229-376 (396)
28 1v4v_A UDP-N-acetylglucosamine 99.4 1.3E-12 4.4E-17 126.0 15.8 136 274-431 198-343 (376)
29 3c48_A Predicted glycosyltrans 99.4 5.4E-11 1.8E-15 117.0 27.8 338 3-427 20-396 (438)
30 1vgv_A UDP-N-acetylglucosamine 99.4 2.8E-12 9.5E-17 123.9 16.2 136 273-429 204-349 (384)
31 3fro_A GLGA glycogen synthase; 99.4 3E-10 1E-14 111.5 27.6 111 330-457 309-427 (439)
32 3beo_A UDP-N-acetylglucosamine 99.4 4.3E-11 1.5E-15 115.1 21.0 161 273-456 204-372 (375)
33 2iuy_A Avigt4, glycosyltransfe 99.4 1E-11 3.5E-16 118.0 15.4 125 277-421 164-307 (342)
34 2r60_A Glycosyl transferase, g 99.3 3.3E-10 1.1E-14 113.4 26.5 86 331-428 334-430 (499)
35 2gek_A Phosphatidylinositol ma 99.3 4.7E-11 1.6E-15 116.0 18.8 86 331-428 262-355 (406)
36 2jjm_A Glycosyl transferase, g 99.3 5.5E-09 1.9E-13 101.1 31.2 320 3-428 15-356 (394)
37 2x6q_A Trehalose-synthase TRET 99.3 1E-09 3.6E-14 107.0 25.3 84 331-428 292-385 (416)
38 2iw1_A Lipopolysaccharide core 99.2 7E-09 2.4E-13 99.4 26.9 160 274-455 195-369 (374)
39 4hwg_A UDP-N-acetylglucosamine 99.1 7.7E-10 2.6E-14 106.3 14.4 317 4-424 10-344 (385)
40 1rzu_A Glycogen synthase 1; gl 99.0 4.7E-07 1.6E-11 90.0 27.7 134 276-429 292-450 (485)
41 2qzs_A Glycogen synthase; glyc 98.9 1.6E-06 5.5E-11 86.1 29.6 135 275-429 292-451 (485)
42 3s28_A Sucrose synthase 1; gly 98.9 2.6E-07 9E-12 96.2 23.5 87 331-429 639-741 (816)
43 2vsy_A XCC0866; transferase, g 98.8 9.2E-06 3.2E-10 82.3 31.7 90 332-430 434-530 (568)
44 3oy2_A Glycosyltransferase B73 98.7 1.5E-06 5E-11 84.4 20.6 161 274-455 183-385 (413)
45 2hy7_A Glucuronosyltransferase 98.6 2E-05 6.9E-10 76.2 25.5 76 331-424 264-354 (406)
46 2f9f_A First mannosyl transfer 98.6 1.8E-07 6.1E-12 79.5 8.5 139 276-433 24-174 (177)
47 2xci_A KDO-transferase, 3-deox 98.5 2.2E-05 7.5E-10 75.1 21.3 91 333-434 261-361 (374)
48 3qhp_A Type 1 capsular polysac 97.9 0.00012 4.2E-09 60.7 12.0 132 275-429 2-147 (166)
49 1psw_A ADP-heptose LPS heptosy 97.9 0.0023 7.7E-08 60.2 22.2 103 4-133 1-106 (348)
50 2bfw_A GLGA glycogen synthase; 97.8 0.00027 9.4E-09 60.6 13.4 83 333-428 96-187 (200)
51 3q3e_A HMW1C-like glycosyltran 97.8 0.00019 6.6E-09 71.6 12.9 142 274-430 440-596 (631)
52 3tov_A Glycosyl transferase fa 97.8 0.00078 2.7E-08 63.5 16.6 105 2-133 7-115 (349)
53 4gyw_A UDP-N-acetylglucosamine 97.6 0.001 3.4E-08 69.1 15.5 142 273-429 521-675 (723)
54 2gt1_A Lipopolysaccharide hept 97.2 0.012 4.2E-07 54.6 16.7 46 4-49 1-48 (326)
55 3rhz_A GTF3, nucleotide sugar 97.2 0.00044 1.5E-08 64.7 6.5 109 333-457 215-337 (339)
56 2x0d_A WSAF; GT4 family, trans 96.9 0.0013 4.5E-08 63.5 6.4 84 332-428 295-385 (413)
57 3vue_A GBSS-I, granule-bound s 95.5 0.06 2E-06 53.7 10.2 135 275-421 327-476 (536)
58 2phj_A 5'-nucleotidase SURE; S 93.3 0.22 7.5E-06 43.6 7.4 113 4-136 2-127 (251)
59 1g5t_A COB(I)alamin adenosyltr 92.3 1.6 5.5E-05 36.7 11.2 97 3-117 28-130 (196)
60 2wqk_A 5'-nucleotidase SURE; S 90.4 0.63 2.2E-05 41.0 7.0 112 4-136 2-127 (251)
61 3t5t_A Putative glycosyltransf 90.2 0.93 3.2E-05 44.2 8.7 106 333-458 353-471 (496)
62 1uqt_A Alpha, alpha-trehalose- 90.1 1.9 6.4E-05 42.1 10.9 104 334-457 333-451 (482)
63 3nb0_A Glycogen [starch] synth 88.6 1.9 6.3E-05 43.7 9.6 45 332-378 490-550 (725)
64 3zqu_A Probable aromatic acid 88.3 0.74 2.5E-05 39.2 5.7 48 1-49 1-49 (209)
65 3q0i_A Methionyl-tRNA formyltr 86.8 7.3 0.00025 35.5 11.8 35 1-40 5-39 (318)
66 1ccw_A Protein (glutamate muta 86.5 1.3 4.5E-05 34.8 5.9 40 1-40 1-40 (137)
67 1j9j_A Stationary phase surviV 85.9 3.2 0.00011 36.2 8.5 114 4-136 1-128 (247)
68 1l5x_A SurviVal protein E; str 85.8 2.3 7.9E-05 37.9 7.7 113 4-137 1-128 (280)
69 2bw0_A 10-FTHFDH, 10-formyltet 85.3 5.8 0.0002 36.4 10.4 104 1-139 20-132 (329)
70 2e6c_A 5'-nucleotidase SURE; S 85.1 3.6 0.00012 35.8 8.4 115 4-136 1-129 (244)
71 2x0d_A WSAF; GT4 family, trans 85.0 0.44 1.5E-05 45.7 2.8 39 3-41 46-89 (413)
72 4dzz_A Plasmid partitioning pr 83.5 8.1 0.00028 32.2 10.1 83 4-117 1-85 (206)
73 1kjn_A MTH0777; hypotethical p 83.2 1.8 6.2E-05 34.0 5.0 47 3-49 6-54 (157)
74 3vue_A GBSS-I, granule-bound s 83.1 1.2 4.2E-05 44.1 5.2 38 3-40 9-52 (536)
75 3dfz_A SIRC, precorrin-2 dehyd 81.6 13 0.00046 31.8 10.5 145 272-439 30-186 (223)
76 4dim_A Phosphoribosylglycinami 81.6 6.9 0.00024 36.9 9.8 36 1-41 5-40 (403)
77 1xmp_A PURE, phosphoribosylami 81.1 15 0.00053 29.6 9.9 145 274-442 11-165 (170)
78 3qjg_A Epidermin biosynthesis 80.8 2 6.7E-05 35.4 4.8 44 4-48 6-49 (175)
79 3qxc_A Dethiobiotin synthetase 79.2 4.6 0.00016 35.2 7.0 36 3-38 20-57 (242)
80 1id1_A Putative potassium chan 79.0 1.6 5.5E-05 34.9 3.7 35 1-40 1-35 (153)
81 3lqk_A Dipicolinate synthase s 78.6 1.9 6.4E-05 36.5 4.1 43 3-46 7-50 (201)
82 2q5c_A NTRC family transcripti 78.3 7.3 0.00025 32.6 7.7 44 90-139 128-171 (196)
83 1sbz_A Probable aromatic acid 78.3 2.9 9.9E-05 35.1 5.1 45 4-49 1-46 (197)
84 1u11_A PURE (N5-carboxyaminoim 77.3 27 0.00093 28.5 10.3 146 274-443 21-176 (182)
85 2ywr_A Phosphoribosylglycinami 76.8 32 0.0011 29.1 11.5 103 4-138 2-112 (216)
86 3iqw_A Tail-anchored protein t 76.3 16 0.00055 33.5 10.1 43 4-46 16-59 (334)
87 3igf_A ALL4481 protein; two-do 75.6 5.5 0.00019 37.3 6.8 41 4-45 2-43 (374)
88 2ejb_A Probable aromatic acid 75.6 5.1 0.00017 33.4 5.9 44 4-48 2-45 (189)
89 1mvl_A PPC decarboxylase athal 75.3 3.5 0.00012 35.0 4.9 45 3-49 19-63 (209)
90 3ghy_A Ketopantoate reductase 75.3 2.3 7.9E-05 39.2 4.1 44 1-49 1-44 (335)
91 3fgn_A Dethiobiotin synthetase 74.6 38 0.0013 29.5 11.6 36 3-38 25-62 (251)
92 2ixd_A LMBE-related protein; h 74.5 10 0.00035 33.0 7.8 38 1-38 1-38 (242)
93 3mcu_A Dipicolinate synthase, 74.3 3.4 0.00012 35.0 4.5 44 2-46 4-48 (207)
94 3io3_A DEHA2D07832P; chaperone 73.0 12 0.00042 34.5 8.4 43 3-45 17-62 (348)
95 2iz6_A Molybdenum cofactor car 72.3 28 0.00096 28.5 9.5 99 264-379 37-140 (176)
96 4gi5_A Quinone reductase; prot 71.8 6.2 0.00021 35.2 5.9 39 1-39 20-61 (280)
97 1g63_A Epidermin modifying enz 71.8 3.2 0.00011 34.3 3.7 45 4-49 3-47 (181)
98 1p3y_1 MRSD protein; flavoprot 71.8 2.1 7.2E-05 35.9 2.6 45 3-48 8-52 (194)
99 3auf_A Glycinamide ribonucleot 71.2 49 0.0017 28.3 12.0 103 3-137 22-132 (229)
100 3u7q_B Nitrogenase molybdenum- 71.2 39 0.0013 33.1 11.9 33 93-134 430-469 (523)
101 1pjq_A CYSG, siroheme synthase 71.0 40 0.0014 32.3 11.9 143 273-439 12-168 (457)
102 1fmt_A Methionyl-tRNA FMet for 70.9 32 0.0011 31.1 10.5 33 3-40 3-35 (314)
103 2vqe_B 30S ribosomal protein S 70.4 4.6 0.00016 35.3 4.5 35 106-140 157-193 (256)
104 4ds3_A Phosphoribosylglycinami 69.4 32 0.0011 29.0 9.5 105 1-137 5-117 (209)
105 4b4o_A Epimerase family protei 69.1 4.6 0.00016 36.2 4.6 33 4-40 1-33 (298)
106 2yxb_A Coenzyme B12-dependent 68.8 6.8 0.00023 31.7 5.0 39 3-41 18-56 (161)
107 3l7i_A Teichoic acid biosynthe 68.8 8.4 0.00029 39.7 7.0 108 338-457 605-718 (729)
108 2yvq_A Carbamoyl-phosphate syn 68.5 9.1 0.00031 30.2 5.6 89 15-133 34-130 (143)
109 3tqq_A Methionyl-tRNA formyltr 68.1 28 0.00096 31.5 9.5 32 3-39 2-33 (314)
110 1qzu_A Hypothetical protein MD 67.9 3.8 0.00013 34.7 3.4 46 3-49 19-65 (206)
111 3zq6_A Putative arsenical pump 67.9 8.2 0.00028 35.3 6.0 39 4-42 14-53 (324)
112 3sc4_A Short chain dehydrogena 67.4 42 0.0014 29.6 10.6 36 3-41 8-43 (285)
113 3ug7_A Arsenical pump-driving 66.8 18 0.0006 33.4 8.1 40 4-43 26-66 (349)
114 3bfv_A CAPA1, CAPB2, membrane 66.3 38 0.0013 29.8 9.9 39 3-41 81-121 (271)
115 1o4v_A Phosphoribosylaminoimid 66.3 53 0.0018 26.8 12.6 143 274-442 13-165 (183)
116 3rg8_A Phosphoribosylaminoimid 66.3 49 0.0017 26.4 10.5 139 275-440 3-150 (159)
117 3tqr_A Phosphoribosylglycinami 66.2 42 0.0014 28.4 9.7 106 1-138 1-115 (215)
118 3i83_A 2-dehydropantoate 2-red 65.7 8.8 0.0003 34.9 5.8 41 3-49 2-42 (320)
119 3vot_A L-amino acid ligase, BL 65.6 23 0.00079 33.5 9.0 97 1-131 1-101 (425)
120 1y80_A Predicted cobalamin bin 65.0 12 0.00041 31.6 6.1 42 3-44 88-129 (210)
121 3bbn_B Ribosomal protein S2; s 64.8 3.9 0.00013 35.2 2.9 33 107-139 157-191 (231)
122 1qgu_B Protein (nitrogenase mo 64.5 27 0.00091 34.3 9.2 26 106-134 433-465 (519)
123 3hn2_A 2-dehydropantoate 2-red 64.5 10 0.00034 34.4 5.9 40 4-49 3-42 (312)
124 1mio_B Nitrogenase molybdenum 64.5 21 0.00073 34.3 8.5 33 93-134 377-409 (458)
125 2fb6_A Conserved hypothetical 63.0 11 0.00038 28.5 4.9 45 1-45 4-53 (117)
126 3av3_A Phosphoribosylglycinami 62.9 68 0.0023 27.0 11.4 103 4-138 4-114 (212)
127 1e2b_A Enzyme IIB-cellobiose; 61.9 13 0.00043 27.6 4.9 39 1-39 1-39 (106)
128 2h31_A Multifunctional protein 61.6 1.1E+02 0.0037 28.9 12.7 140 273-440 264-413 (425)
129 3zzm_A Bifunctional purine bio 61.6 38 0.0013 32.7 9.1 102 3-124 9-118 (523)
130 3gpi_A NAD-dependent epimerase 61.6 8.6 0.00029 34.1 4.8 35 1-40 1-35 (286)
131 3dm5_A SRP54, signal recogniti 61.3 31 0.001 33.0 8.7 40 5-44 102-141 (443)
132 1ehi_A LMDDL2, D-alanine:D-lac 60.6 8.1 0.00028 36.2 4.6 40 1-40 1-45 (377)
133 3bgw_A DNAB-like replicative h 60.4 13 0.00044 35.7 6.0 41 6-46 200-240 (444)
134 2r8r_A Sensor protein; KDPD, P 59.9 12 0.00041 32.2 5.0 39 3-41 6-44 (228)
135 2a5l_A Trp repressor binding p 59.7 12 0.00042 31.0 5.2 41 1-41 3-44 (200)
136 1hdo_A Biliverdin IX beta redu 59.3 14 0.00049 30.5 5.6 36 1-40 1-36 (206)
137 2i2x_B MTAC, methyltransferase 59.3 16 0.00055 32.0 6.0 38 3-40 123-160 (258)
138 2r85_A PURP protein PF1517; AT 59.0 8.4 0.00029 35.1 4.3 35 2-42 1-35 (334)
139 3cio_A ETK, tyrosine-protein k 59.0 52 0.0018 29.4 9.6 39 3-41 103-143 (299)
140 3kkl_A Probable chaperone prot 59.0 16 0.00055 31.7 5.9 41 1-41 1-52 (244)
141 3pdi_A Nitrogenase MOFE cofact 58.8 35 0.0012 33.1 8.8 33 93-134 393-425 (483)
142 1lss_A TRK system potassium up 58.0 10 0.00035 29.1 4.1 34 2-40 3-36 (140)
143 1bg6_A N-(1-D-carboxylethyl)-L 57.8 7.9 0.00027 35.7 4.0 35 1-40 2-36 (359)
144 3kcq_A Phosphoribosylglycinami 57.8 42 0.0014 28.4 8.1 103 1-139 5-115 (215)
145 3ged_A Short-chain dehydrogena 57.7 56 0.0019 28.3 9.2 33 5-40 3-35 (247)
146 3gi1_A LBP, laminin-binding pr 57.0 47 0.0016 29.6 8.8 80 31-136 178-259 (286)
147 3la6_A Tyrosine-protein kinase 56.7 66 0.0022 28.5 9.7 40 3-42 91-132 (286)
148 4g81_D Putative hexonate dehyd 56.7 60 0.0021 28.3 9.3 33 4-39 9-41 (255)
149 3osu_A 3-oxoacyl-[acyl-carrier 56.6 84 0.0029 26.8 10.3 36 1-39 1-36 (246)
150 2dzd_A Pyruvate carboxylase; b 56.4 41 0.0014 32.2 9.0 33 4-41 7-39 (461)
151 2o1e_A YCDH; alpha-beta protei 56.3 73 0.0025 28.7 10.1 83 27-135 185-269 (312)
152 2ew2_A 2-dehydropantoate 2-red 56.2 11 0.00039 33.8 4.7 35 1-40 1-35 (316)
153 3tov_A Glycosyl transferase fa 56.0 81 0.0028 28.8 10.6 98 5-136 187-288 (349)
154 2vo1_A CTP synthase 1; pyrimid 55.8 13 0.00045 32.6 4.5 42 1-42 20-64 (295)
155 2xxa_A Signal recognition part 55.5 35 0.0012 32.5 8.1 39 5-43 102-141 (433)
156 3rfo_A Methionyl-tRNA formyltr 55.3 1E+02 0.0035 27.8 10.8 33 3-40 4-36 (317)
157 1e4e_A Vancomycin/teicoplanin 55.2 7.7 0.00026 35.7 3.4 40 1-40 1-44 (343)
158 3ezx_A MMCP 1, monomethylamine 54.9 22 0.00077 30.1 6.0 41 3-43 92-132 (215)
159 3kuu_A Phosphoribosylaminoimid 54.7 84 0.0029 25.4 9.9 146 275-443 13-167 (174)
160 3h7a_A Short chain dehydrogena 54.2 99 0.0034 26.5 10.4 35 3-40 6-40 (252)
161 2pju_A Propionate catabolism o 54.0 45 0.0015 28.5 7.8 40 90-135 140-179 (225)
162 3hwr_A 2-dehydropantoate 2-red 54.0 13 0.00045 33.7 4.7 42 3-49 19-60 (318)
163 3ego_A Probable 2-dehydropanto 53.8 14 0.00047 33.4 4.7 41 3-49 2-43 (307)
164 4fn4_A Short chain dehydrogena 53.2 73 0.0025 27.7 9.2 35 3-40 6-40 (254)
165 1p9o_A Phosphopantothenoylcyst 53.1 11 0.00039 34.1 3.9 36 6-41 40-89 (313)
166 1mio_A Nitrogenase molybdenum 52.9 39 0.0013 33.2 8.1 34 92-134 447-480 (533)
167 1rw7_A YDR533CP; alpha-beta sa 52.8 26 0.00091 30.2 6.3 41 1-41 1-52 (243)
168 1yt5_A Inorganic polyphosphate 52.4 11 0.00037 33.2 3.7 53 348-422 41-96 (258)
169 3u7q_A Nitrogenase molybdenum- 52.0 49 0.0017 32.1 8.6 33 93-134 409-441 (492)
170 3pdi_B Nitrogenase MOFE cofact 52.0 31 0.0011 33.1 7.2 33 93-134 367-399 (458)
171 3ty2_A 5'-nucleotidase SURE; s 51.4 17 0.0006 31.8 4.7 112 3-136 11-135 (261)
172 3llv_A Exopolyphosphatase-rela 50.7 11 0.00036 29.3 3.1 34 3-41 6-39 (141)
173 3s2u_A UDP-N-acetylglucosamine 50.4 37 0.0013 31.4 7.3 26 348-375 92-120 (365)
174 2g1u_A Hypothetical protein TM 50.1 21 0.00072 28.2 4.9 34 3-41 19-52 (155)
175 1uan_A Hypothetical protein TT 49.5 56 0.0019 27.8 7.7 35 4-38 2-36 (227)
176 3trh_A Phosphoribosylaminoimid 49.4 34 0.0012 27.6 5.7 45 1-46 4-50 (169)
177 2i87_A D-alanine-D-alanine lig 49.3 8.6 0.00029 35.7 2.7 40 1-40 1-44 (364)
178 2i2c_A Probable inorganic poly 49.2 14 0.00047 32.8 3.9 52 349-422 36-93 (272)
179 3giu_A Pyrrolidone-carboxylate 49.2 28 0.00095 29.5 5.6 29 1-29 1-31 (215)
180 2xj4_A MIPZ; replication, cell 49.1 18 0.00061 32.2 4.7 41 1-41 1-43 (286)
181 1qkk_A DCTD, C4-dicarboxylate 48.3 35 0.0012 26.4 5.9 63 369-437 74-136 (155)
182 2pn1_A Carbamoylphosphate synt 48.2 21 0.00073 32.3 5.2 35 1-41 2-38 (331)
183 1b93_A Protein (methylglyoxal 48.2 36 0.0012 27.0 5.7 94 4-133 12-118 (152)
184 2zts_A Putative uncharacterize 48.0 1.1E+02 0.0037 25.9 9.6 43 5-47 32-75 (251)
185 3gl9_A Response regulator; bet 47.8 31 0.001 25.5 5.3 41 96-139 38-87 (122)
186 1jkx_A GART;, phosphoribosylgl 46.8 1.3E+02 0.0044 25.3 11.2 103 4-138 1-111 (212)
187 3qvl_A Putative hydantoin race 46.7 32 0.0011 29.8 5.8 37 4-40 2-39 (245)
188 2zki_A 199AA long hypothetical 46.7 20 0.00067 29.7 4.4 40 1-41 1-42 (199)
189 4hb9_A Similarities with proba 46.6 13 0.00046 34.6 3.7 30 4-38 2-31 (412)
190 1psw_A ADP-heptose LPS heptosy 46.5 1.6E+02 0.0056 26.3 12.4 102 5-136 182-288 (348)
191 3q9l_A Septum site-determining 46.2 1.2E+02 0.0039 25.9 9.6 38 4-41 2-41 (260)
192 3ouz_A Biotin carboxylase; str 45.8 61 0.0021 30.8 8.2 35 1-40 4-38 (446)
193 3e03_A Short chain dehydrogena 45.6 1.5E+02 0.0051 25.7 10.9 35 3-40 5-39 (274)
194 4huj_A Uncharacterized protein 45.5 9.9 0.00034 32.4 2.3 34 1-39 21-54 (220)
195 2qyt_A 2-dehydropantoate 2-red 45.3 11 0.00038 34.0 2.7 32 3-39 8-45 (317)
196 1eiw_A Hypothetical protein MT 45.3 33 0.0011 25.6 4.8 65 346-421 36-109 (111)
197 2lpm_A Two-component response 45.0 11 0.00039 28.7 2.3 39 94-135 43-86 (123)
198 3tl3_A Short-chain type dehydr 44.9 78 0.0027 27.2 8.2 34 3-39 8-41 (257)
199 3da8_A Probable 5'-phosphoribo 44.7 79 0.0027 26.7 7.7 112 1-139 10-122 (215)
200 3kjh_A CO dehydrogenase/acetyl 44.5 16 0.00054 31.4 3.5 39 4-42 1-39 (254)
201 3ors_A N5-carboxyaminoimidazol 44.4 1.2E+02 0.0041 24.2 11.4 142 275-441 4-156 (163)
202 3rot_A ABC sugar transporter, 44.3 1.5E+02 0.0051 25.8 10.2 40 1-40 1-42 (297)
203 1iow_A DD-ligase, DDLB, D-ALA\ 44.1 31 0.0011 30.6 5.6 40 2-41 1-44 (306)
204 2q6t_A DNAB replication FORK h 44.0 17 0.00059 34.8 3.9 41 6-46 203-244 (444)
205 2lnd_A De novo designed protei 43.8 9.5 0.00032 26.1 1.4 50 368-421 49-100 (112)
206 2bln_A Protein YFBG; transfera 43.6 1.8E+02 0.0061 26.0 11.2 95 4-138 1-107 (305)
207 3eag_A UDP-N-acetylmuramate:L- 43.3 51 0.0017 29.9 6.9 34 3-40 4-37 (326)
208 2z1m_A GDP-D-mannose dehydrata 43.3 22 0.00074 32.3 4.4 36 1-40 1-36 (345)
209 3fwz_A Inner membrane protein 43.3 13 0.00046 28.8 2.6 34 3-41 7-40 (140)
210 2xw6_A MGS, methylglyoxal synt 43.2 37 0.0013 26.3 5.0 96 3-134 3-111 (134)
211 1pq4_A Periplasmic binding pro 43.1 1.6E+02 0.0056 26.0 10.1 78 32-137 190-269 (291)
212 1vmd_A MGS, methylglyoxal synt 43.0 38 0.0013 27.6 5.2 87 13-133 35-134 (178)
213 3oow_A Phosphoribosylaminoimid 42.9 1.3E+02 0.0044 24.1 13.5 144 275-443 6-160 (166)
214 3lrx_A Putative hydrogenase; a 42.7 22 0.00075 28.4 3.8 35 4-41 24-58 (158)
215 3mc3_A DSRE/DSRF-like family p 42.7 41 0.0014 25.9 5.3 44 3-46 15-61 (134)
216 3h2s_A Putative NADH-flavin re 42.6 26 0.00088 29.4 4.6 34 4-41 1-34 (224)
217 3ew7_A LMO0794 protein; Q8Y8U8 42.6 26 0.00089 29.2 4.6 34 4-41 1-34 (221)
218 4g6h_A Rotenone-insensitive NA 42.3 12 0.00042 36.5 2.6 34 3-41 42-75 (502)
219 4fu0_A D-alanine--D-alanine li 42.2 15 0.00053 33.9 3.2 38 1-38 1-42 (357)
220 3cx3_A Lipoprotein; zinc-bindi 42.1 74 0.0025 28.2 7.6 83 27-135 172-256 (284)
221 3e8x_A Putative NAD-dependent 42.0 27 0.00093 29.6 4.6 36 2-41 20-55 (236)
222 1u7z_A Coenzyme A biosynthesis 41.9 49 0.0017 28.3 6.0 23 19-41 36-58 (226)
223 3to5_A CHEY homolog; alpha(5)b 41.6 25 0.00086 27.1 3.9 34 106-139 56-98 (134)
224 3cky_A 2-hydroxymethyl glutara 41.5 30 0.001 30.8 5.0 34 1-39 1-35 (301)
225 3dfu_A Uncharacterized protein 41.4 18 0.00061 31.2 3.2 32 3-39 6-37 (232)
226 3lqk_A Dipicolinate synthase s 41.4 1.5E+02 0.0052 24.6 10.1 56 367-423 120-187 (201)
227 3kvo_A Hydroxysteroid dehydrog 41.3 2E+02 0.0069 26.1 10.7 35 4-41 45-79 (346)
228 4gbj_A 6-phosphogluconate dehy 41.2 25 0.00087 31.5 4.4 29 5-38 7-35 (297)
229 3k96_A Glycerol-3-phosphate de 40.8 16 0.00056 33.8 3.1 33 3-40 29-61 (356)
230 3g1w_A Sugar ABC transporter; 40.8 1.8E+02 0.0062 25.3 11.7 38 1-38 1-41 (305)
231 1u0t_A Inorganic polyphosphate 40.7 16 0.00055 33.0 3.0 31 345-377 72-106 (307)
232 3kl4_A SRP54, signal recogniti 40.4 98 0.0034 29.4 8.5 40 4-43 97-137 (433)
233 3t7c_A Carveol dehydrogenase; 40.4 1.7E+02 0.0059 25.7 9.9 34 4-40 28-61 (299)
234 3ius_A Uncharacterized conserv 40.2 63 0.0022 28.2 7.0 34 3-41 5-38 (286)
235 3dhn_A NAD-dependent epimerase 40.0 28 0.00097 29.2 4.4 36 1-40 1-37 (227)
236 4dll_A 2-hydroxy-3-oxopropiona 40.0 36 0.0012 30.8 5.3 32 3-39 31-62 (320)
237 2bi7_A UDP-galactopyranose mut 39.9 35 0.0012 31.8 5.3 35 1-40 1-35 (384)
238 3i12_A D-alanine-D-alanine lig 39.8 18 0.00061 33.6 3.2 40 1-40 1-44 (364)
239 3mjf_A Phosphoribosylamine--gl 39.7 65 0.0022 30.5 7.3 25 3-32 3-27 (431)
240 2gk4_A Conserved hypothetical 39.6 22 0.00076 30.6 3.5 23 19-41 31-53 (232)
241 3enk_A UDP-glucose 4-epimerase 39.3 30 0.001 31.3 4.7 35 1-39 2-37 (341)
242 1vi6_A 30S ribosomal protein S 39.2 12 0.00042 31.5 1.8 34 106-139 114-149 (208)
243 2j37_W Signal recognition part 39.0 90 0.0031 30.3 8.1 39 5-43 103-141 (504)
244 1kyq_A Met8P, siroheme biosynt 39.0 2E+02 0.0069 25.2 12.1 86 348-440 106-211 (274)
245 3f6r_A Flavodoxin; FMN binding 38.9 46 0.0016 25.8 5.2 38 4-41 2-40 (148)
246 4e5s_A MCCFLIKE protein (BA_56 38.9 44 0.0015 30.5 5.6 73 287-378 62-136 (331)
247 3afo_A NADH kinase POS5; alpha 38.7 24 0.00082 33.1 3.9 59 342-422 108-171 (388)
248 3n7t_A Macrophage binding prot 38.5 66 0.0023 27.8 6.5 39 3-41 9-58 (247)
249 4e12_A Diketoreductase; oxidor 38.2 27 0.00092 31.0 4.0 35 1-40 2-36 (283)
250 3lyu_A Putative hydrogenase; t 38.0 28 0.00094 27.2 3.6 35 4-41 19-53 (142)
251 4e3z_A Putative oxidoreductase 37.8 48 0.0016 28.9 5.7 36 1-39 23-58 (272)
252 1jx7_A Hypothetical protein YC 37.8 32 0.0011 25.4 3.9 33 14-46 15-49 (117)
253 3i6i_A Putative leucoanthocyan 37.7 35 0.0012 31.0 5.0 98 1-134 8-117 (346)
254 3uhj_A Probable glycerol dehyd 37.5 63 0.0021 30.2 6.6 94 22-137 43-139 (387)
255 3e5n_A D-alanine-D-alanine lig 37.5 20 0.00069 33.6 3.2 40 1-40 20-63 (386)
256 1dhr_A Dihydropteridine reduct 37.3 42 0.0014 28.6 5.1 34 4-40 7-40 (241)
257 3sju_A Keto reductase; short-c 37.2 34 0.0012 30.1 4.6 36 2-40 22-57 (279)
258 3pfn_A NAD kinase; structural 37.1 19 0.00063 33.4 2.8 58 343-422 103-164 (365)
259 3qha_A Putative oxidoreductase 37.1 20 0.00067 32.1 3.0 33 3-40 15-47 (296)
260 1ks9_A KPA reductase;, 2-dehyd 37.1 27 0.00093 30.8 3.9 32 4-40 1-32 (291)
261 3hyw_A Sulfide-quinone reducta 37.0 22 0.00074 33.8 3.4 35 1-41 1-37 (430)
262 3bch_A 40S ribosomal protein S 36.8 14 0.00048 32.1 1.8 35 106-140 150-186 (253)
263 3qlj_A Short chain dehydrogena 36.7 2.3E+02 0.0078 25.2 10.8 33 4-39 27-59 (322)
264 3l4e_A Uncharacterized peptida 36.6 61 0.0021 27.1 5.8 45 265-309 19-63 (206)
265 4e21_A 6-phosphogluconate dehy 36.6 26 0.0009 32.4 3.8 34 1-39 20-53 (358)
266 3l4b_C TRKA K+ channel protien 36.6 14 0.00047 31.3 1.7 33 4-41 1-33 (218)
267 3h75_A Periplasmic sugar-bindi 36.5 1.9E+02 0.0066 25.9 9.9 39 1-39 1-42 (350)
268 2gt1_A Lipopolysaccharide hept 36.4 30 0.001 31.2 4.2 97 4-136 179-280 (326)
269 2ehd_A Oxidoreductase, oxidore 36.4 48 0.0016 28.0 5.3 37 1-40 1-38 (234)
270 2hmt_A YUAA protein; RCK, KTN, 36.3 21 0.00071 27.4 2.7 32 4-40 7-38 (144)
271 3m1a_A Putative dehydrogenase; 35.5 51 0.0018 28.8 5.5 37 1-40 1-38 (281)
272 1evy_A Glycerol-3-phosphate de 35.5 15 0.0005 34.1 1.9 31 5-40 17-47 (366)
273 3dqp_A Oxidoreductase YLBE; al 35.4 31 0.0011 28.8 3.9 34 4-41 1-34 (219)
274 1qyd_A Pinoresinol-lariciresin 35.2 31 0.001 30.8 4.0 36 1-40 1-37 (313)
275 3of5_A Dethiobiotin synthetase 35.0 39 0.0013 28.8 4.4 36 3-38 3-40 (228)
276 3doj_A AT3G25530, dehydrogenas 35.0 38 0.0013 30.5 4.5 33 3-40 21-53 (310)
277 3slg_A PBGP3 protein; structur 35.0 31 0.0011 31.7 4.1 37 1-41 22-59 (372)
278 1meo_A Phosophoribosylglycinam 34.9 2E+02 0.0068 24.0 11.2 105 4-139 1-112 (209)
279 2b69_A UDP-glucuronate decarbo 34.7 39 0.0013 30.6 4.7 35 2-40 26-60 (343)
280 4g65_A TRK system potassium up 34.6 12 0.00039 36.3 1.0 34 3-41 3-36 (461)
281 2vrn_A Protease I, DR1199; cys 34.5 89 0.003 25.4 6.5 40 1-41 7-46 (190)
282 1pno_A NAD(P) transhydrogenase 34.4 43 0.0015 26.9 4.0 39 3-41 23-64 (180)
283 1q57_A DNA primase/helicase; d 34.3 2.2E+02 0.0076 27.4 10.3 41 6-46 245-286 (503)
284 1qyc_A Phenylcoumaran benzylic 34.3 32 0.0011 30.5 4.0 36 1-40 1-37 (308)
285 3f6p_A Transcriptional regulat 34.1 60 0.002 23.7 5.0 34 106-139 45-84 (120)
286 1d4o_A NADP(H) transhydrogenas 33.8 44 0.0015 26.9 4.0 39 3-41 22-63 (184)
287 3s40_A Diacylglycerol kinase; 33.8 1.1E+02 0.0039 27.2 7.5 68 289-379 25-98 (304)
288 1p3y_1 MRSD protein; flavoprot 33.6 55 0.0019 27.2 4.9 138 276-422 11-186 (194)
289 3d3j_A Enhancer of mRNA-decapp 33.6 38 0.0013 30.5 4.2 34 4-40 133-168 (306)
290 1gsa_A Glutathione synthetase; 33.4 36 0.0012 30.3 4.1 37 4-40 2-41 (316)
291 2r6a_A DNAB helicase, replicat 33.4 71 0.0024 30.5 6.4 42 5-46 205-247 (454)
292 1ydh_A AT5G11950; structural g 33.4 1.4E+02 0.0048 25.2 7.5 95 263-376 32-141 (216)
293 3t6k_A Response regulator rece 33.3 50 0.0017 24.8 4.5 34 106-139 47-89 (136)
294 3oid_A Enoyl-[acyl-carrier-pro 33.3 46 0.0016 28.8 4.7 36 1-39 1-36 (258)
295 1jzt_A Hypothetical 27.5 kDa p 33.2 33 0.0011 29.8 3.6 33 4-39 59-93 (246)
296 3pnx_A Putative sulfurtransfer 33.1 73 0.0025 25.5 5.4 48 1-48 2-50 (160)
297 3qjg_A Epidermin biosynthesis 32.9 1E+02 0.0036 25.0 6.4 114 275-397 7-143 (175)
298 1uls_A Putative 3-oxoacyl-acyl 32.8 55 0.0019 28.0 5.1 37 1-40 1-38 (245)
299 2pzm_A Putative nucleotide sug 32.7 38 0.0013 30.6 4.2 33 3-39 20-52 (330)
300 1sb8_A WBPP; epimerase, 4-epim 32.7 37 0.0013 30.9 4.2 35 2-40 26-60 (352)
301 3gg2_A Sugar dehydrogenase, UD 32.4 32 0.0011 32.9 3.8 34 1-40 1-34 (450)
302 2zyd_A 6-phosphogluconate dehy 32.3 24 0.0008 34.3 2.8 35 1-40 13-47 (480)
303 2jk1_A HUPR, hydrogenase trans 32.3 77 0.0026 23.7 5.5 62 369-435 71-132 (139)
304 2a33_A Hypothetical protein; s 32.2 1.4E+02 0.0047 25.2 7.3 100 263-376 36-145 (215)
305 2gdz_A NAD+-dependent 15-hydro 32.1 61 0.0021 28.1 5.4 33 5-40 8-40 (267)
306 1z7e_A Protein aRNA; rossmann 32.0 78 0.0027 31.9 6.8 96 4-139 1-108 (660)
307 1y1p_A ARII, aldehyde reductas 32.0 50 0.0017 29.7 5.0 34 3-40 11-44 (342)
308 3ruf_A WBGU; rossmann fold, UD 32.0 39 0.0013 30.7 4.2 35 2-40 24-58 (351)
309 3lp6_A Phosphoribosylaminoimid 32.0 2E+02 0.0069 23.2 12.7 142 274-441 7-158 (174)
310 3d3k_A Enhancer of mRNA-decapp 31.9 37 0.0013 29.7 3.8 33 4-39 86-120 (259)
311 3g17_A Similar to 2-dehydropan 31.8 14 0.00049 33.0 1.1 33 3-40 2-34 (294)
312 2rcy_A Pyrroline carboxylate r 31.7 17 0.00059 31.6 1.6 35 1-40 2-40 (262)
313 2raf_A Putative dinucleotide-b 31.7 40 0.0014 28.2 3.9 32 3-39 19-50 (209)
314 3k3p_A D-alanine--D-alanine li 31.7 27 0.00093 32.6 3.1 40 1-40 35-78 (383)
315 1z82_A Glycerol-3-phosphate de 31.6 38 0.0013 30.8 4.0 33 3-40 14-46 (335)
316 3dtt_A NADP oxidoreductase; st 31.4 42 0.0014 28.9 4.1 33 3-40 19-51 (245)
317 3foj_A Uncharacterized protein 31.4 92 0.0032 22.1 5.4 32 4-39 57-88 (100)
318 2fsv_C NAD(P) transhydrogenase 31.4 49 0.0017 27.2 4.0 39 3-41 46-87 (203)
319 3bul_A Methionine synthase; tr 31.4 70 0.0024 31.7 6.0 41 3-43 98-138 (579)
320 3zv4_A CIS-2,3-dihydrobiphenyl 31.4 57 0.002 28.6 5.1 37 1-40 1-38 (281)
321 3gem_A Short chain dehydrogena 31.4 43 0.0015 29.1 4.2 35 4-41 27-61 (260)
322 3l77_A Short-chain alcohol deh 31.3 55 0.0019 27.6 4.9 34 4-40 2-35 (235)
323 2iz1_A 6-phosphogluconate dehy 31.3 28 0.00096 33.6 3.2 34 1-39 3-36 (474)
324 2o8n_A APOA-I binding protein; 31.2 43 0.0015 29.4 4.1 34 4-40 80-115 (265)
325 4h15_A Short chain alcohol deh 31.2 63 0.0021 28.2 5.2 35 3-40 10-44 (261)
326 4iin_A 3-ketoacyl-acyl carrier 31.0 61 0.0021 28.2 5.2 34 4-40 29-62 (271)
327 1u11_A PURE (N5-carboxyaminoim 31.0 80 0.0027 25.7 5.2 32 106-137 75-108 (182)
328 3c85_A Putative glutathione-re 31.0 27 0.00093 28.4 2.7 34 3-41 39-73 (183)
329 1djl_A Transhydrogenase DIII; 30.9 51 0.0017 27.2 4.0 39 3-41 45-86 (207)
330 3hr8_A Protein RECA; alpha and 30.9 95 0.0033 28.6 6.6 37 6-42 64-100 (356)
331 2vpq_A Acetyl-COA carboxylase; 30.8 1.4E+02 0.0048 28.2 8.1 32 4-40 2-33 (451)
332 3lyl_A 3-oxoacyl-(acyl-carrier 30.7 71 0.0024 27.2 5.5 38 1-41 1-39 (247)
333 2qs7_A Uncharacterized protein 30.7 68 0.0023 25.0 4.8 45 4-48 8-53 (144)
334 2w70_A Biotin carboxylase; lig 30.7 1.4E+02 0.0048 28.2 8.1 31 4-39 3-33 (449)
335 1rkx_A CDP-glucose-4,6-dehydra 30.7 42 0.0014 30.6 4.2 35 2-40 8-42 (357)
336 3alj_A 2-methyl-3-hydroxypyrid 30.5 37 0.0013 31.4 3.8 33 2-39 10-42 (379)
337 2hun_A 336AA long hypothetical 30.5 41 0.0014 30.3 4.0 35 1-39 1-37 (336)
338 3j20_B 30S ribosomal protein S 30.4 18 0.00061 30.3 1.4 34 106-139 110-145 (202)
339 1sby_A Alcohol dehydrogenase; 30.2 92 0.0031 26.6 6.2 34 5-41 6-40 (254)
340 3lk7_A UDP-N-acetylmuramoylala 30.2 98 0.0033 29.5 6.8 32 3-39 9-40 (451)
341 1e6u_A GDP-fucose synthetase; 30.2 30 0.001 31.0 3.0 35 1-39 1-35 (321)
342 4dqx_A Probable oxidoreductase 30.0 63 0.0021 28.3 5.1 34 4-40 27-60 (277)
343 4h1h_A LMO1638 protein; MCCF-l 30.0 69 0.0023 29.1 5.4 26 288-313 63-88 (327)
344 1txg_A Glycerol-3-phosphate de 30.0 41 0.0014 30.4 4.0 31 4-39 1-31 (335)
345 1ulz_A Pyruvate carboxylase N- 30.0 1.8E+02 0.0061 27.5 8.7 32 4-40 3-34 (451)
346 1o97_C Electron transferring f 29.9 52 0.0018 28.9 4.4 41 91-137 102-148 (264)
347 2an1_A Putative kinase; struct 29.9 25 0.00084 31.4 2.3 31 345-377 60-94 (292)
348 2rir_A Dipicolinate synthase, 29.9 72 0.0025 28.4 5.5 33 1-38 5-37 (300)
349 3iwa_A FAD-dependent pyridine 29.7 38 0.0013 32.6 3.8 37 1-42 1-39 (472)
350 2zkq_b 40S ribosomal protein S 29.6 20 0.00068 31.9 1.6 35 106-140 117-153 (295)
351 3hww_A 2-succinyl-5-enolpyruvy 29.5 1.7E+02 0.0059 28.6 8.7 27 351-377 72-104 (556)
352 2x4g_A Nucleoside-diphosphate- 29.5 57 0.0019 29.4 4.9 34 3-40 13-46 (342)
353 2qv7_A Diacylglycerol kinase D 29.4 53 0.0018 29.9 4.6 69 289-379 41-115 (337)
354 3r5x_A D-alanine--D-alanine li 29.2 34 0.0011 30.6 3.2 45 3-47 3-51 (307)
355 3o26_A Salutaridine reductase; 29.1 58 0.002 28.8 4.8 35 4-41 12-46 (311)
356 3sr3_A Microcin immunity prote 29.1 70 0.0024 29.2 5.3 72 288-378 64-137 (336)
357 2d1p_A TUSD, hypothetical UPF0 29.1 1.1E+02 0.0038 23.7 5.7 44 3-46 12-59 (140)
358 3kd9_A Coenzyme A disulfide re 28.9 37 0.0013 32.4 3.6 36 1-41 1-38 (449)
359 2ewd_A Lactate dehydrogenase,; 28.8 33 0.0011 31.0 3.0 36 1-41 1-38 (317)
360 3g0o_A 3-hydroxyisobutyrate de 28.8 34 0.0012 30.6 3.1 32 3-39 7-38 (303)
361 2q62_A ARSH; alpha/beta, flavo 28.7 68 0.0023 27.8 4.9 38 2-39 33-73 (247)
362 4eg0_A D-alanine--D-alanine li 28.7 84 0.0029 28.1 5.8 39 3-41 13-55 (317)
363 3m6m_D Sensory/regulatory prot 28.7 51 0.0018 25.1 3.8 33 106-138 57-100 (143)
364 2vou_A 2,6-dihydroxypyridine h 28.6 46 0.0016 31.0 4.1 32 3-39 5-36 (397)
365 2hy5_A Putative sulfurtransfer 28.6 45 0.0015 25.5 3.4 42 5-46 2-47 (130)
366 3qiv_A Short-chain dehydrogena 28.6 77 0.0026 27.1 5.4 35 3-40 8-42 (253)
367 2bon_A Lipid kinase; DAG kinas 28.6 94 0.0032 28.2 6.1 82 273-379 30-119 (332)
368 4b4k_A N5-carboxyaminoimidazol 28.6 2.4E+02 0.0081 22.9 13.2 146 274-443 22-177 (181)
369 2l82_A Designed protein OR32; 28.5 1.2E+02 0.004 22.1 5.2 34 276-313 3-36 (162)
370 3obb_A Probable 3-hydroxyisobu 28.5 50 0.0017 29.6 4.1 32 3-39 3-34 (300)
371 1f0y_A HCDH, L-3-hydroxyacyl-C 28.4 39 0.0013 30.2 3.5 33 3-40 15-47 (302)
372 3gt7_A Sensor protein; structu 28.4 84 0.0029 24.1 5.2 41 95-138 42-91 (154)
373 2w36_A Endonuclease V; hypoxan 28.3 97 0.0033 26.4 5.6 42 95-137 92-140 (225)
374 3ic5_A Putative saccharopine d 28.3 49 0.0017 24.0 3.5 33 3-40 5-38 (118)
375 1ooe_A Dihydropteridine reduct 28.2 81 0.0028 26.6 5.4 36 1-40 1-36 (236)
376 3hl0_A Maleylacetate reductase 28.2 2.9E+02 0.0099 25.2 9.4 43 93-138 76-121 (353)
377 1efv_B Electron transfer flavo 28.2 59 0.002 28.4 4.4 40 92-137 107-152 (255)
378 3dqz_A Alpha-hydroxynitrIle ly 28.2 35 0.0012 28.8 3.0 41 1-41 1-41 (258)
379 3ro0_A Pyrrolidone-carboxylate 28.1 89 0.003 26.6 5.4 28 3-30 2-31 (223)
380 2l2q_A PTS system, cellobiose- 28.0 53 0.0018 24.2 3.6 35 3-37 4-38 (109)
381 1efp_B ETF, protein (electron 28.0 59 0.002 28.3 4.4 39 92-136 104-148 (252)
382 2bru_C NAD(P) transhydrogenase 27.9 49 0.0017 26.6 3.4 39 3-41 30-71 (186)
383 3eme_A Rhodanese-like domain p 27.8 86 0.003 22.4 4.7 32 4-39 57-88 (103)
384 3tfo_A Putative 3-oxoacyl-(acy 27.7 78 0.0027 27.5 5.2 37 1-40 1-37 (264)
385 3kcn_A Adenylate cyclase homol 27.6 77 0.0026 24.2 4.8 53 368-426 74-127 (151)
386 2dpo_A L-gulonate 3-dehydrogen 27.6 38 0.0013 30.7 3.2 33 3-40 6-38 (319)
387 3f5d_A Protein YDEA; unknow pr 27.5 53 0.0018 27.5 3.9 41 1-42 1-42 (206)
388 3u5c_A 40S ribosomal protein S 27.5 23 0.00078 30.8 1.6 34 106-139 116-151 (252)
389 3op4_A 3-oxoacyl-[acyl-carrier 27.4 88 0.003 26.7 5.5 34 4-40 9-42 (248)
390 3uf0_A Short-chain dehydrogena 27.4 1.1E+02 0.0037 26.7 6.2 34 4-40 31-64 (273)
391 1jay_A Coenzyme F420H2:NADP+ o 27.3 55 0.0019 27.2 4.0 32 4-40 1-33 (212)
392 2x5n_A SPRPN10, 26S proteasome 27.3 90 0.0031 25.7 5.3 35 6-40 110-144 (192)
393 3rkr_A Short chain oxidoreduct 27.2 76 0.0026 27.4 5.1 33 5-40 30-62 (262)
394 2gkg_A Response regulator homo 27.2 59 0.002 23.6 3.9 47 369-422 79-125 (127)
395 2izz_A Pyrroline-5-carboxylate 27.2 46 0.0016 30.1 3.7 36 1-41 20-59 (322)
396 3qvo_A NMRA family protein; st 27.1 55 0.0019 27.7 4.1 21 20-40 36-57 (236)
397 2h78_A Hibadh, 3-hydroxyisobut 27.1 58 0.002 29.0 4.3 32 3-39 3-34 (302)
398 2ywx_A Phosphoribosylaminoimid 27.0 2.4E+02 0.008 22.4 11.1 135 277-441 2-146 (157)
399 3icc_A Putative 3-oxoacyl-(acy 27.0 1.2E+02 0.004 25.9 6.3 35 3-40 6-40 (255)
400 3ppi_A 3-hydroxyacyl-COA dehyd 27.0 70 0.0024 27.9 4.9 34 4-40 30-63 (281)
401 3eod_A Protein HNR; response r 26.9 1E+02 0.0035 22.6 5.2 34 106-139 50-90 (130)
402 3t4x_A Oxidoreductase, short c 26.8 81 0.0028 27.3 5.2 34 4-40 10-43 (267)
403 3o3m_A Alpha subunit 2-hydroxy 26.8 2.3E+02 0.0078 26.5 8.6 111 15-137 229-374 (408)
404 3nrc_A Enoyl-[acyl-carrier-pro 26.8 1.3E+02 0.0044 26.2 6.6 41 4-46 26-67 (280)
405 4e7p_A Response regulator; DNA 26.7 1.2E+02 0.004 23.1 5.7 44 93-139 55-105 (150)
406 1c0p_A D-amino acid oxidase; a 26.7 51 0.0018 30.1 4.0 35 1-40 3-38 (363)
407 1dbw_A Transcriptional regulat 26.7 96 0.0033 22.6 5.0 34 106-139 46-86 (126)
408 2bka_A CC3, TAT-interacting pr 26.7 53 0.0018 27.8 3.9 34 3-40 18-53 (242)
409 2xzm_B RPS0E; ribosome, transl 26.7 16 0.00055 31.6 0.4 34 106-139 113-148 (241)
410 3s55_A Putative short-chain de 26.6 74 0.0025 27.8 5.0 34 4-40 10-43 (281)
411 3qsg_A NAD-binding phosphogluc 26.6 37 0.0013 30.6 2.9 33 3-40 24-57 (312)
412 4hp8_A 2-deoxy-D-gluconate 3-d 26.6 1.1E+02 0.0038 26.4 5.9 36 4-42 9-44 (247)
413 4eso_A Putative oxidoreductase 26.6 77 0.0026 27.3 5.0 33 5-40 9-41 (255)
414 2q1w_A Putative nucleotide sug 26.5 66 0.0023 28.9 4.7 34 3-40 21-54 (333)
415 3i4f_A 3-oxoacyl-[acyl-carrier 26.3 98 0.0033 26.6 5.7 35 3-40 6-40 (264)
416 3sbx_A Putative uncharacterize 26.3 77 0.0026 26.2 4.5 38 3-40 13-53 (189)
417 2nwq_A Probable short-chain de 26.3 64 0.0022 28.2 4.4 33 5-40 22-54 (272)
418 3l6e_A Oxidoreductase, short-c 26.3 1E+02 0.0035 26.1 5.6 36 1-40 1-36 (235)
419 4fgs_A Probable dehydrogenase 26.2 77 0.0026 27.9 4.9 34 4-40 29-62 (273)
420 1q74_A 1D-MYO-inosityl 2-aceta 26.2 81 0.0028 28.2 5.1 39 1-39 1-40 (303)
421 1zl0_A Hypothetical protein PA 26.2 1E+02 0.0036 27.7 5.8 73 287-378 64-138 (311)
422 1i36_A Conserved hypothetical 26.2 48 0.0016 28.8 3.5 30 4-38 1-30 (264)
423 1rcu_A Conserved hypothetical 26.2 1E+02 0.0036 25.5 5.3 35 3-37 23-64 (195)
424 2nly_A BH1492 protein, diverge 26.1 1.9E+02 0.0064 24.9 7.2 39 90-133 114-155 (245)
425 1d7o_A Enoyl-[acyl-carrier pro 26.1 88 0.003 27.6 5.4 33 4-38 8-41 (297)
426 3r8n_B 30S ribosomal protein S 26.1 12 0.00042 31.8 -0.4 34 106-139 148-183 (218)
427 3lq1_A 2-succinyl-5-enolpyruvy 26.0 3E+02 0.01 27.1 9.7 79 291-377 13-107 (578)
428 3dme_A Conserved exported prot 26.0 38 0.0013 30.8 3.0 35 1-40 1-36 (369)
429 1yb4_A Tartronic semialdehyde 26.0 63 0.0022 28.5 4.4 31 3-38 3-33 (295)
430 2rjn_A Response regulator rece 26.0 1.1E+02 0.0036 23.4 5.4 43 93-138 40-89 (154)
431 1wcv_1 SOJ, segregation protei 25.9 55 0.0019 28.3 3.9 41 3-43 5-47 (257)
432 1fjh_A 3alpha-hydroxysteroid d 25.9 93 0.0032 26.5 5.4 32 5-39 2-33 (257)
433 3v2h_A D-beta-hydroxybutyrate 25.8 71 0.0024 28.0 4.7 33 4-39 25-57 (281)
434 3guy_A Short-chain dehydrogena 25.8 54 0.0019 27.6 3.8 33 5-40 2-34 (230)
435 2ffj_A Conserved hypothetical 25.8 78 0.0027 28.4 4.8 35 4-39 165-199 (300)
436 3c3m_A Response regulator rece 25.7 81 0.0028 23.6 4.5 33 106-138 46-87 (138)
437 3goc_A Endonuclease V; alpha-b 25.6 86 0.003 26.9 4.8 32 106-137 106-144 (237)
438 3pef_A 6-phosphogluconate dehy 25.5 64 0.0022 28.4 4.3 32 4-40 2-33 (287)
439 2wsb_A Galactitol dehydrogenas 25.5 86 0.0029 26.7 5.1 33 5-40 12-44 (254)
440 1y56_B Sarcosine oxidase; dehy 25.4 37 0.0013 31.2 2.8 34 3-41 5-38 (382)
441 3iz6_A 40S ribosomal protein S 25.3 32 0.0011 30.6 2.1 35 106-140 121-157 (305)
442 3v8b_A Putative dehydrogenase, 25.3 79 0.0027 27.8 4.9 34 4-40 28-61 (283)
443 3pxx_A Carveol dehydrogenase; 25.2 86 0.0029 27.4 5.1 34 4-40 10-43 (287)
444 1ydg_A Trp repressor binding p 25.2 1E+02 0.0035 25.5 5.3 39 3-41 6-45 (211)
445 1vpd_A Tartronate semialdehyde 25.1 77 0.0026 28.0 4.8 31 4-39 6-36 (299)
446 1e7w_A Pteridine reductase; di 25.1 81 0.0028 27.8 4.9 32 4-38 9-40 (291)
447 3f67_A Putative dienelactone h 25.1 88 0.003 25.9 5.0 35 5-39 33-67 (241)
448 4a9w_A Monooxygenase; baeyer-v 25.1 31 0.0011 31.2 2.2 35 1-40 1-35 (357)
449 1wma_A Carbonyl reductase [NAD 25.1 86 0.0029 27.0 5.1 36 2-40 2-38 (276)
450 4fs3_A Enoyl-[acyl-carrier-pro 25.0 90 0.0031 26.9 5.1 37 3-40 5-41 (256)
451 3ia7_A CALG4; glycosysltransfe 25.0 1.1E+02 0.0039 27.9 6.3 35 275-311 6-40 (402)
452 3g79_A NDP-N-acetyl-D-galactos 25.0 85 0.0029 30.3 5.2 35 3-42 18-54 (478)
453 3nbm_A PTS system, lactose-spe 24.9 74 0.0025 23.5 3.8 36 3-38 6-41 (108)
454 1cyd_A Carbonyl reductase; sho 24.8 1.2E+02 0.0041 25.5 5.9 21 20-40 20-40 (244)
455 3ksu_A 3-oxoacyl-acyl carrier 24.8 1E+02 0.0034 26.7 5.4 33 4-39 11-43 (262)
456 2prs_A High-affinity zinc upta 24.8 2.6E+02 0.0088 24.5 8.2 42 90-134 209-252 (284)
457 2o23_A HADH2 protein; HSD17B10 24.7 1E+02 0.0034 26.4 5.4 33 5-40 13-45 (265)
458 4ehi_A Bifunctional purine bio 24.6 92 0.0031 30.1 5.2 41 15-66 32-72 (534)
459 3bfj_A 1,3-propanediol oxidore 24.6 4.1E+02 0.014 24.4 9.9 95 21-139 22-145 (387)
460 3euw_A MYO-inositol dehydrogen 24.5 2.4E+02 0.0084 25.3 8.3 87 276-379 7-99 (344)
461 3u9l_A 3-oxoacyl-[acyl-carrier 24.5 80 0.0027 28.5 4.8 36 1-39 1-37 (324)
462 3to5_A CHEY homolog; alpha(5)b 24.4 67 0.0023 24.7 3.7 47 369-421 86-132 (134)
463 3awd_A GOX2181, putative polyo 24.4 83 0.0028 26.9 4.8 33 5-40 14-46 (260)
464 3d7l_A LIN1944 protein; APC893 24.3 82 0.0028 25.7 4.6 33 3-40 3-35 (202)
465 3sc6_A DTDP-4-dehydrorhamnose 24.3 26 0.0009 30.8 1.5 32 4-39 6-37 (287)
466 3tpc_A Short chain alcohol deh 24.3 1.2E+02 0.004 26.0 5.7 35 3-40 6-40 (257)
467 3rft_A Uronate dehydrogenase; 24.2 37 0.0013 29.6 2.4 21 21-41 17-37 (267)
468 3edm_A Short chain dehydrogena 24.2 1.2E+02 0.0042 26.0 5.9 33 4-39 8-40 (259)
469 2vns_A Metalloreductase steap3 24.2 52 0.0018 27.6 3.3 33 3-40 28-60 (215)
470 1f4p_A Flavodoxin; electron tr 24.2 72 0.0025 24.5 4.0 36 4-39 1-37 (147)
471 3md9_A Hemin-binding periplasm 24.1 76 0.0026 27.2 4.5 30 106-135 58-89 (255)
472 3hly_A Flavodoxin-like domain; 24.1 93 0.0032 24.6 4.6 37 4-40 1-38 (161)
473 2ae2_A Protein (tropinone redu 24.1 95 0.0033 26.7 5.1 33 5-40 10-42 (260)
474 2fwm_X 2,3-dihydro-2,3-dihydro 24.0 1.1E+02 0.0038 26.1 5.5 33 5-40 8-40 (250)
475 2xdo_A TETX2 protein; tetracyc 24.0 59 0.002 30.2 3.9 33 3-40 26-58 (398)
476 2c5m_A CTP synthase; cytidine 24.0 56 0.0019 28.5 3.3 41 2-42 21-64 (294)
477 3lf2_A Short chain oxidoreduct 24.0 95 0.0033 26.8 5.1 34 4-40 8-41 (265)
478 2z1n_A Dehydrogenase; reductas 24.0 96 0.0033 26.7 5.1 34 4-40 7-40 (260)
479 3i42_A Response regulator rece 24.0 1E+02 0.0035 22.4 4.8 35 1-39 1-35 (127)
480 2wm3_A NMRA-like family domain 23.9 60 0.0021 28.6 3.8 38 1-42 2-41 (299)
481 1xgk_A Nitrogen metabolite rep 23.9 66 0.0022 29.4 4.2 36 3-42 5-40 (352)
482 1q6z_A BFD, BFDC, benzoylforma 23.9 1.6E+02 0.0056 28.5 7.3 75 292-376 5-95 (528)
483 3pdu_A 3-hydroxyisobutyrate de 23.8 59 0.002 28.7 3.7 32 4-40 2-33 (287)
484 1ybh_A Acetolactate synthase, 23.8 1.5E+02 0.0052 29.3 7.1 27 351-377 76-108 (590)
485 3ai3_A NADPH-sorbose reductase 23.8 98 0.0033 26.6 5.1 33 5-40 8-40 (263)
486 2etv_A Iron(III) ABC transport 23.7 75 0.0026 29.0 4.5 31 106-136 95-126 (346)
487 2c20_A UDP-glucose 4-epimerase 23.7 76 0.0026 28.3 4.6 33 4-40 2-34 (330)
488 2vvp_A Ribose-5-phosphate isom 23.6 43 0.0015 26.8 2.4 37 1-39 1-37 (162)
489 3m2p_A UDP-N-acetylglucosamine 23.6 1.1E+02 0.0038 27.0 5.6 34 3-40 2-35 (311)
490 1h5q_A NADP-dependent mannitol 23.5 72 0.0025 27.4 4.2 32 5-39 15-46 (265)
491 1u0t_A Inorganic polyphosphate 23.5 80 0.0027 28.3 4.5 39 1-39 1-41 (307)
492 4dmm_A 3-oxoacyl-[acyl-carrier 23.5 1E+02 0.0035 26.8 5.2 33 4-39 28-60 (269)
493 1x0v_A GPD-C, GPDH-C, glycerol 23.4 27 0.00093 32.0 1.4 36 1-41 6-48 (354)
494 1cp2_A CP2, nitrogenase iron p 23.3 74 0.0025 27.5 4.3 37 5-41 3-39 (269)
495 1xq1_A Putative tropinone redu 23.3 1E+02 0.0035 26.5 5.2 33 5-40 15-47 (266)
496 3dff_A Teicoplanin pseudoaglyc 23.3 97 0.0033 27.2 5.0 37 3-39 7-43 (273)
497 3ax6_A Phosphoribosylaminoimid 23.2 1.2E+02 0.004 27.9 5.9 33 4-41 2-34 (380)
498 1tvm_A PTS system, galactitol- 23.1 99 0.0034 22.9 4.3 36 3-38 21-57 (113)
499 1ek6_A UDP-galactose 4-epimera 23.0 76 0.0026 28.6 4.5 32 4-39 3-34 (348)
500 1ff9_A Saccharopine reductase; 23.0 72 0.0025 30.5 4.4 35 1-40 1-35 (450)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.3e-68 Score=520.01 Aligned_cols=432 Identities=25% Similarity=0.455 Sum_probs=351.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCC-CCChH
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHG--FRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEE-RTDPG 79 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rG--h~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~ 79 (459)
+.||+++|++++||++|++.||+.|+.+| +.|||++++.+...+.+... ....+++|..++++++++.. ..+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecCCCCCCCccccCChH
Confidence 57999999999999999999999999999 99999999766665533210 11357999999999887642 23344
Q ss_pred HHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHhhcccccccCCCCC
Q 012652 80 KLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDGIIDS 159 (459)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (459)
..+..+...+...+++.++.+..+.+.++|+||+|.+.+|+..+|+++|||++.+++++++.+..+++++.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~- 168 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSK- 168 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCC-
Confidence 4455555555555666665542211158999999999999999999999999999999999999888876554431100
Q ss_pred CCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchhh----hccC
Q 012652 160 NGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPGA----FNMI 235 (459)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~~ 235 (459)
.....+....+|++++++..+++. ++.. ..+ ..+.+.+.+..+....++.+++||+++||++. ++.+
T Consensus 169 --~~~~~~~~~~iPg~p~~~~~dlp~-~~~~-~~~-----~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~ 239 (454)
T 3hbf_A 169 --EVHDVKSIDVLPGFPELKASDLPE-GVIK-DID-----VPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF 239 (454)
T ss_dssp --HHTTSSCBCCSTTSCCBCGGGSCT-TSSS-CTT-----SHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS
T ss_pred --ccccccccccCCCCCCcChhhCch-hhcc-CCc-----hHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC
Confidence 001123345689999999999884 3332 222 44566677777778899999999999999863 3456
Q ss_pred CccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCC
Q 012652 236 PELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDIT 315 (459)
Q Consensus 236 p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~ 315 (459)
|++++|||++...... .++.+.++.+|++..+++++|||||||....+.+++.+++.+++..+++|||+++..
T Consensus 240 ~~v~~vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~-- 312 (454)
T 3hbf_A 240 KLLLNVGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD-- 312 (454)
T ss_dssp SCEEECCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC--
T ss_pred CCEEEECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc--
Confidence 8999999998754321 123467899999998889999999999988889999999999999999999999865
Q ss_pred CCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchhhhhhhceeee
Q 012652 316 TDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKV 395 (459)
Q Consensus 316 ~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~ 395 (459)
....+|++|.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+++||+.||+++++.+|+
T Consensus 313 --~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~ 390 (454)
T 3hbf_A 313 --PKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEI 390 (454)
T ss_dssp --HHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCS
T ss_pred --chhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCe
Confidence 234588899989999999999999999999999999999999999999999999999999999999999999984599
Q ss_pred eeeeecCCCCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhC
Q 012652 396 GLKLDKDESGIITGEEISNKLVQVLGDQ---NFKARALELKEITMSSVREGGSSYKTFQNFLEWVKT 459 (459)
Q Consensus 396 G~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (459)
|+.++. ..+++++|.++|+++|+|+ +||+||++|++.+++++++||||++++++||+++.+
T Consensus 391 Gv~l~~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 391 GVGVDN---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp EEECGG---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred eEEecC---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 999974 6799999999999999987 899999999999999999999999999999999863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.6e-64 Score=503.54 Aligned_cols=446 Identities=32% Similarity=0.679 Sum_probs=337.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCC-CCCeEEEecCCCCCCCC----CCC
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYL-GEQIRLVSIPDGMEPWE----ERT 76 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~i~~~~~~~~----~~~ 76 (459)
+++||+++|++++||++|++.||++|++|||+|||++++.+...+.+........ ..+++|..++++++..+ ...
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~ 86 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQ 86 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------C
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcch
Confidence 4679999999999999999999999999999999999988776664421000000 13899999998776521 123
Q ss_pred ChHHHHHHHHHhccHHHHHHHHHHhCCC-CCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHhhcccccccC
Q 012652 77 DPGKLIEKVLQVMPGKLEELIEEINGRD-DEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDG 155 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~ 155 (459)
+...++..+...+.+.++++++.++++. +.+||+||+|.+..|+..+|+++|||++.++++++.......+++.+...+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 166 (482)
T 2pq6_A 87 DVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERG 166 (482)
T ss_dssp CHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcC
Confidence 4455566555678888999999886420 158999999999999999999999999999999988777665555544445
Q ss_pred CCCCCCCc--cc---cccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchh
Q 012652 156 IIDSNGTP--IR---KQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPG 230 (459)
Q Consensus 156 ~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 230 (459)
+.+..... .. ......+|+++.+...+++ .++...... +...+.+.+..+...+++.+|+||+++||++
T Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~ 240 (482)
T 2pq6_A 167 IIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPN-----DIMLEFFIEVADRVNKDTTILLNTFNELESD 240 (482)
T ss_dssp CSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTT-----CHHHHHHHHHHHTCCTTCCEEESSCGGGGHH
T ss_pred CCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcc-----cHHHHHHHHHHHhhccCCEEEEcChHHHhHH
Confidence 54422111 00 1122245666655555544 222222111 3334444444555678999999999999986
Q ss_pred h----hccCCccccccccccC-CCCCC-----C-CCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHH
Q 012652 231 A----FNMIPELLPVGPLLAS-NRLGN-----S-AGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGL 299 (459)
Q Consensus 231 ~----~~~~p~v~~vGp~~~~-~~~~~-----~-~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~ 299 (459)
. ++..|++++|||++.. +.... . ....|+.+.++.+|++..+++++|||||||....+.+++.+++.+|
T Consensus 241 ~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 320 (482)
T 2pq6_A 241 VINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGL 320 (482)
T ss_dssp HHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHH
Confidence 2 3444899999999863 21100 0 0112345678999999987889999999999877888899999999
Q ss_pred hhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccc
Q 012652 300 EICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF 379 (459)
Q Consensus 300 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~ 379 (459)
++.+++|||+++.....+....+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++
T Consensus 321 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~ 400 (482)
T 2pq6_A 321 ANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFF 400 (482)
T ss_dssp HHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred HhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcc
Confidence 99999999999754211111237888988889999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhh-ceeeeeeeeecCCCCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHH
Q 012652 380 VDQFLNESYIC-DIWKVGLKLDKDESGIITGEEISNKLVQVLGDQ---NFKARALELKEITMSSVREGGSSYKTFQNFLE 455 (459)
Q Consensus 380 ~DQ~~na~rv~-~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (459)
.||+.||++++ + +|+|+.++ ..+++++|.++|+++|.|+ +||+||+++++.+++++.+||||.+++++|++
T Consensus 401 ~dQ~~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~ 475 (482)
T 2pq6_A 401 ADQPTDCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIK 475 (482)
T ss_dssp TTHHHHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 99999999997 6 79999995 5689999999999999998 69999999999999999999999999999999
Q ss_pred HHh
Q 012652 456 WVK 458 (459)
Q Consensus 456 ~~~ 458 (459)
+++
T Consensus 476 ~~~ 478 (482)
T 2pq6_A 476 DVL 478 (482)
T ss_dssp HTT
T ss_pred HHH
Confidence 875
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=6.8e-61 Score=477.21 Aligned_cols=434 Identities=29% Similarity=0.494 Sum_probs=327.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCc--chHHHHhhhhccCCCCCCeEEEecCCCCCCC-CCCCCh
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKH-GFRVTFVNSEY--NHKRVMKSLEGKNYLGEQIRLVSIPDGMEPW-EERTDP 78 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~r-Gh~Vt~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~ 78 (459)
++||+++|++++||++|+++||++|++| ||+|||++++. +...+.+... ....+++|..++....+. ....+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 99999999877 3444443110 002489999998653221 111233
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCCCCCc-cEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHhhcccccccCCC
Q 012652 79 GKLIEKVLQVMPGKLEELIEEINGRDDEKI-DCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDGII 157 (459)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~p-Dlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (459)
...+......+.+.++++++.+.. +.++ |+||+|.+..|+..+|+++|||++.++++++.....+.++|.....+..
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~--~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH--TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc--CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 333333445566778888877631 1578 9999999988999999999999999999998877776666544332211
Q ss_pred CCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchhhhc----
Q 012652 158 DSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPGAFN---- 233 (459)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~---- 233 (459)
+ +.. .+....+|+++++...+++.. +..+. ...+..+.+.....+..+.+++|++.+++.+...
T Consensus 161 ~---~~~-~~~~~~~Pg~~p~~~~~l~~~-~~~~~-------~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~ 228 (480)
T 2vch_A 161 E---FRE-LTEPLMLPGCVPVAGKDFLDP-AQDRK-------DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQE 228 (480)
T ss_dssp C---GGG-CSSCBCCTTCCCBCGGGSCGG-GSCTT-------SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHS
T ss_pred c---ccc-cCCcccCCCCCCCChHHCchh-hhcCC-------chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHh
Confidence 1 000 011234677776666665532 22211 1234444445556677888999999999975221
Q ss_pred ---cCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEE
Q 012652 234 ---MIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVV 310 (459)
Q Consensus 234 ---~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~ 310 (459)
..|++++|||++....... ..+.+.++.+|++..+++++|||||||....+.+++.+++++++.++++|||++
T Consensus 229 ~~~~~~~v~~vGpl~~~~~~~~----~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~ 304 (480)
T 2vch_A 229 PGLDKPPVYPVGPLVNIGKQEA----KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVI 304 (480)
T ss_dssp CCTTCCCEEECCCCCCCSCSCC---------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCCcEEEEecccccccccc----CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 1378999999986532100 013567899999998788999999999988889999999999999999999999
Q ss_pred cCCCCC-----------CC-CCCCChhHHHHhcCCceeec-ccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccc
Q 012652 311 RPDITT-----------DA-NDVYPRGFQERVATRGQMIG-WAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 377 (459)
Q Consensus 311 ~~~~~~-----------~~-~~~~~~~~~~~~~~nv~i~~-~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P 377 (459)
+..... .. ...+|++|.++..++.+++. |+||.+||+|+++++||||||+||++||+++|||+|++|
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P 384 (480)
T 2vch_A 305 RSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWP 384 (480)
T ss_dssp CCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred CCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecc
Confidence 864211 01 13588898888877777775 999999999999999999999999999999999999999
Q ss_pred cccccchhhhhh-hceeeeeeeeecCCCCcccHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHhhhhcCCChHHHHHHH
Q 012652 378 YFVDQFLNESYI-CDIWKVGLKLDKDESGIITGEEISNKLVQVLG---DQNFKARALELKEITMSSVREGGSSYKTFQNF 453 (459)
Q Consensus 378 ~~~DQ~~na~rv-~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~---~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 453 (459)
+++||+.||+++ ++ +|+|+.++..+...+++++|.++|+++|. +++||+||++|++.+++++.+||++.+++++|
T Consensus 385 ~~~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~ 463 (480)
T 2vch_A 385 LYAEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLV 463 (480)
T ss_dssp CSTTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHH
T ss_pred ccccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999997 57 79999997421237999999999999998 77999999999999999999999999999999
Q ss_pred HHHHh
Q 012652 454 LEWVK 458 (459)
Q Consensus 454 ~~~~~ 458 (459)
|++++
T Consensus 464 v~~~~ 468 (480)
T 2vch_A 464 ALKWK 468 (480)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=5.3e-61 Score=474.90 Aligned_cols=434 Identities=24% Similarity=0.463 Sum_probs=326.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCE--EEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCC-CCChH
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFR--VTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEE-RTDPG 79 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~--Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~ 79 (459)
+.||+++|++++||++|+++||++|++|||. ||+++++.....+.+.... ....++++..+++++++... .....
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~~~~~~~ 84 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYVFAGRPQ 84 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCTT
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCcccccCChH
Confidence 5799999999999999999999999999654 5778876554444332100 01248999999887776431 12333
Q ss_pred HHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHhhccccccc-CCCC
Q 012652 80 KLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDD-GIID 158 (459)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~-~~~~ 158 (459)
.....+...+...++++++.+.++.+.+||+||+|.+..|+..+|+++|||++.++++++..+....+++.+... +...
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (456)
T 2c1x_A 85 EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 164 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcc
Confidence 444444444445566666543321016899999999999999999999999999999988776665544332211 1111
Q ss_pred CCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchhh----hcc
Q 012652 159 SNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPGA----FNM 234 (459)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~ 234 (459)
. .....+....+|+++.++..+++. .+...... ....+...+......+++.+++||+++||++. ++.
T Consensus 165 ~--~~~~~~~~~~~pg~~~~~~~~lp~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~ 236 (456)
T 2c1x_A 165 I--QGREDELLNFIPGMSKVRFRDLQE-GIVFGNLN-----SLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK 236 (456)
T ss_dssp C--TTCTTCBCTTSTTCTTCBGGGSCT-TTSSSCTT-----SHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHH
T ss_pred c--ccccccccccCCCCCcccHHhCch-hhcCCCcc-----cHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhc
Confidence 0 001122334577887766666663 22211111 22333344444456788999999999999862 344
Q ss_pred CCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCC
Q 012652 235 IPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDI 314 (459)
Q Consensus 235 ~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~ 314 (459)
.|++++|||++...... .++.+.++.+|++..+++++|||||||......+++.+++.+++..+++|||+++..
T Consensus 237 ~~~~~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~- 310 (456)
T 2c1x_A 237 LKTYLNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK- 310 (456)
T ss_dssp SSCEEECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG-
T ss_pred CCCEEEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc-
Confidence 68999999998653211 023456789999988788999999999987788899999999999999999999764
Q ss_pred CCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchhhhhhhceee
Q 012652 315 TTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWK 394 (459)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G 394 (459)
....+|++|.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||+++++.||
T Consensus 311 ---~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g 387 (456)
T 2c1x_A 311 ---ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLE 387 (456)
T ss_dssp ---GGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSC
T ss_pred ---chhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhC
Confidence 23457888888888999999999999999999999999999999999999999999999999999999999998349
Q ss_pred eeeeeecCCCCcccHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Q 012652 395 VGLKLDKDESGIITGEEISNKLVQVLGDQ---NFKARALELKEITMSSVREGGSSYKTFQNFLEWVK 458 (459)
Q Consensus 395 ~G~~~~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (459)
+|+.++. ..+++++|.++|+++|+|+ +||+||+++++.+++++.+||||.+++++||+.++
T Consensus 388 ~g~~l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 388 IGVRIEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp CEEECGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred eEEEecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 9999973 6789999999999999987 89999999999999999999999999999999875
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.9e-59 Score=462.14 Aligned_cols=427 Identities=26% Similarity=0.456 Sum_probs=326.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcch-----HHHHhhhhccCCCCCCeEEEecCCCC-CCCCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEYNH-----KRVMKSLEGKNYLGEQIRLVSIPDGM-EPWEE 74 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~i~~~~-~~~~~ 74 (459)
++||+++|++++||++|+++||++|++| ||+|||++++.+. ..+.+.. ....+++|..++++. +..+.
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~----~~~~~i~~~~lp~~~~~~~~~ 84 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL----ASQPQIQLIDLPEVEPPPQEL 84 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH----CSCTTEEEEECCCCCCCCGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc----cCCCCceEEECCCCCCCcccc
Confidence 5799999999999999999999999999 9999999987753 3333210 112489999999763 32110
Q ss_pred CCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHhhccccccc
Q 012652 75 RTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDD 154 (459)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~ 154 (459)
.......+......+.+.++++++.+.. .+||+||+|.+..|+..+|+++|||++.++++++.....+.+++.+...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~---~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTILS---NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 161 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHHCC---TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhccC---CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc
Confidence 1111111223334566678888887733 6899999999988999999999999999999999887777766654311
Q ss_pred CCCCCCCCcccccc---ccccCCC-CCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchh
Q 012652 155 GIIDSNGTPIRKQM---IQLAPNM-LEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPG 230 (459)
Q Consensus 155 ~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 230 (459)
+. +.. .+. ...+|++ +++...+++..+. .+ . . .+..+.+.....+.++.+++||++++|++
T Consensus 162 ~~-----~~~-~~~~~~~~~~pg~~~~~~~~~l~~~~~-~~--~-----~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~ 226 (463)
T 2acv_A 162 EV-----FDD-SDRDHQLLNIPGISNQVPSNVLPDACF-NK--D-----G-GYIAYYKLAERFRDTKGIIVNTFSDLEQS 226 (463)
T ss_dssp CC-----CCC-SSGGGCEECCTTCSSCEEGGGSCHHHH-CT--T-----T-HHHHHHHHHHHHTTSSEEEESCCHHHHHH
T ss_pred CC-----CCC-ccccCceeECCCCCCCCChHHCchhhc-CC--c-----h-HHHHHHHHHHhcccCCEEEECCHHHHhHH
Confidence 10 101 111 3356777 6665555542221 11 1 1 23334444555678889999999999986
Q ss_pred hhcc-------CCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcc-cCCHHHHHHHHHHHhhC
Q 012652 231 AFNM-------IPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHT-VLDHNQFQELALGLEIC 302 (459)
Q Consensus 231 ~~~~-------~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~ 302 (459)
...+ .|++++|||++........ ...++.+.++.+|++..+++++|||+|||.. ....+++.+++.+++..
T Consensus 227 ~~~~l~~~~~p~~~v~~vGpl~~~~~~~~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~ 305 (463)
T 2acv_A 227 SIDALYDHDEKIPPIYAVGPLLDLKGQPNP-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHS 305 (463)
T ss_dssp HHHHHHHHCTTSCCEEECCCCCCSSCCCBT-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccCCcEEEeCCCccccccccc-ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhC
Confidence 4332 5789999999865320000 0001234678999999888899999999998 77888999999999999
Q ss_pred CCCEEEEEcCCCCCCCCCCCChhHHHHh--cCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceecccccc
Q 012652 303 NRPFLWVVRPDITTDANDVYPRGFQERV--ATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFV 380 (459)
Q Consensus 303 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~ 380 (459)
+++|||+++.+ ...+|+++.++. ++|+++++|+||.++|+|+++++||||||+||+.||+++|||+|++|++.
T Consensus 306 ~~~~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~ 380 (463)
T 2acv_A 306 GVRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYA 380 (463)
T ss_dssp TCEEEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCST
T ss_pred CCcEEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchh
Confidence 99999999753 124678888777 89999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhh-hceeeeeeee-ecCCCC--cccHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHH
Q 012652 381 DQFLNESYI-CDIWKVGLKL-DKDESG--IITGEEISNKLVQVLG-DQNFKARALELKEITMSSVREGGSSYKTFQNFLE 455 (459)
Q Consensus 381 DQ~~na~rv-~~~~G~G~~~-~~~~~~--~~~~~~l~~~i~~ll~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (459)
||+.||+++ ++ +|+|+.+ +..+.. .+++++|.++|+++|+ +++||+||+++++.+++++.+||+|.+++++||+
T Consensus 381 dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~ 459 (463)
T 2acv_A 381 EQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLID 459 (463)
T ss_dssp THHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 999999995 77 7999998 211124 6899999999999997 4799999999999999999999999999999999
Q ss_pred HHh
Q 012652 456 WVK 458 (459)
Q Consensus 456 ~~~ 458 (459)
+++
T Consensus 460 ~~~ 462 (463)
T 2acv_A 460 DIT 462 (463)
T ss_dssp HHH
T ss_pred Hhc
Confidence 875
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.9e-46 Score=367.95 Aligned_cols=392 Identities=17% Similarity=0.193 Sum_probs=273.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCC-----C
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEE-----R 75 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~ 75 (459)
|+++||+|++.++.||++|++.||++|+++||+|++++++.+.+.+++. +++|..++.+++.... .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 5678999999999999999999999999999999999999988888776 7899988876543211 1
Q ss_pred CChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHhhcccccccC
Q 012652 76 TDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDG 155 (459)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~ 155 (459)
.+....+..+........+++.+.+++ .+||+||+|.+..++..+|+.+|||++.+++.+......... +.....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~-~~~~~~~ 156 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEED-VPAVQDP 156 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHH-SGGGSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccc-ccccccc
Confidence 233344444444444555666666666 899999999988899999999999999998776421111000 0000000
Q ss_pred CCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHH----------hhccCCEEEEcCCc
Q 012652 156 IIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIK----------AMKVADFQFCNSTY 225 (459)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~ 225 (459)
.. ...... ..| ....... ......... ..+.+...+... ....++.+++++.+
T Consensus 157 ~~------~~~~~~-~~~----~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 219 (424)
T 2iya_A 157 TA------DRGEEA-AAP----AGTGDAE-EGAEAEDGL-----VRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPR 219 (424)
T ss_dssp CC---------------------------------HHHH-----HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCT
T ss_pred cc------cccccc-ccc----cccccch-hhhccchhH-----HHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcch
Confidence 00 000000 000 0000000 000000000 111111111111 11257889999999
Q ss_pred cCchhhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCC
Q 012652 226 ELEPGAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRP 305 (459)
Q Consensus 226 ~l~~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 305 (459)
+++++...+.+++++|||+...... ..+|++..+++++|||++||......+.+..+++++++.+.+
T Consensus 220 ~l~~~~~~~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 286 (424)
T 2iya_A 220 TFQIKGDTVGDNYTFVGPTYGDRSH-------------QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWH 286 (424)
T ss_dssp TTSTTGGGCCTTEEECCCCCCCCGG-------------GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSE
T ss_pred hhCCCccCCCCCEEEeCCCCCCccc-------------CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcE
Confidence 9998756678899999997642110 124555445678999999999765678899999999888889
Q ss_pred EEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchh
Q 012652 306 FLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLN 385 (459)
Q Consensus 306 ~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~n 385 (459)
++|+++..... +.+ +..++|+++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|...||+.|
T Consensus 287 ~~~~~g~~~~~-------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 356 (424)
T 2iya_A 287 VVLSVGRFVDP-------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMN 356 (424)
T ss_dssp EEEECCTTSCG-------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred EEEEECCcCCh-------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHH
Confidence 98888754111 111 124678999999999999999998 99999999999999999999999999999999
Q ss_pred hhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHH
Q 012652 386 ESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNF 453 (459)
Q Consensus 386 a~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 453 (459)
|+++++ +|+|+.++. ..+++++|.++|.++|+|++|+++++++++.+++. +...+..+.+
T Consensus 357 a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i 416 (424)
T 2iya_A 357 AERIVE-LGLGRHIPR---DQVTAEKLREAVLAVASDPGVAERLAAVRQEIREA----GGARAAADIL 416 (424)
T ss_dssp HHHHHH-TTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----CHHHHHHHHH
T ss_pred HHHHHH-CCCEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc----CcHHHHHHHH
Confidence 999998 799999874 67899999999999999999999999999998863 4444444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.8e-44 Score=353.44 Aligned_cols=357 Identities=14% Similarity=0.172 Sum_probs=231.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCC----------
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPW---------- 72 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~---------- 72 (459)
.|||||+++|+.||++|+++||++|++|||+|||++++.+....+ . ++.+..+..+....
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~---------g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-A---------GLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-T---------TCEEEESSTTCCSHHHHSCCC---
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-c---------CCeeEecCCchhHhhhcccccccc
Confidence 689999999999999999999999999999999999988766543 3 67777665332211
Q ss_pred -C----CCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHhh
Q 012652 73 -E----ERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFC 147 (459)
Q Consensus 73 -~----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~ 147 (459)
. ...........+.......+.++++.+++ ++||+||+|.+..++..+|+.+|||++.+...+.........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~ 168 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA 168 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh
Confidence 0 01111122223333334445556666665 899999999999999999999999999865543321110000
Q ss_pred cccccccCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhh-ccCCEEEEcCCcc
Q 012652 148 IPKLIDDGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAM-KVADFQFCNSTYE 226 (459)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~ 226 (459)
... +.......+..... ......+....+.
T Consensus 169 ---------------------------------------~~~----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (400)
T 4amg_A 169 ---------------------------------------LIR----------RAMSKDYERHGVTGEPTGSVRLTTTPPS 199 (400)
T ss_dssp ---------------------------------------HHH----------HHTHHHHHHTTCCCCCSCEEEEECCCHH
T ss_pred ---------------------------------------HHH----------HHHHHHHHHhCCCcccccchhhcccCch
Confidence 000 00000000000000 1111122222111
Q ss_pred Cch--hhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCC--HHHHHHHHHHHhhC
Q 012652 227 LEP--GAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLD--HNQFQELALGLEIC 302 (459)
Q Consensus 227 l~~--~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~a~~~~ 302 (459)
... +.....+....+.+... .....+.+|++..+++++|||||||..... .+.+..+++++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~ 267 (400)
T 4amg_A 200 VEALLPEDRRSPGAWPMRYVPY------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADV 267 (400)
T ss_dssp HHHTSCGGGCCTTCEECCCCCC------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGS
T ss_pred hhccCcccccCCcccCcccccc------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhcc
Confidence 110 00001111111111111 112223367877788999999999985433 35688899999999
Q ss_pred CCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceecccccccc
Q 012652 303 NRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQ 382 (459)
Q Consensus 303 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ 382 (459)
+.+++|..++.. ..... ..++|+++.+|+||.++|+|+++ ||||||+||+.||+++|||+|++|++.||
T Consensus 268 ~~~~v~~~~~~~----~~~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ 336 (400)
T 4amg_A 268 DAEFVLTLGGGD----LALLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQ 336 (400)
T ss_dssp SSEEEEECCTTC----CCCCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---C
T ss_pred CceEEEEecCcc----ccccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccH
Confidence 999999987651 11111 23678999999999999999888 99999999999999999999999999999
Q ss_pred chhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012652 383 FLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLEWV 457 (459)
Q Consensus 383 ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (459)
+.||+++++ +|+|+.++. .+.++ ++|+++|+|++||++|+++++++++. .+. ..+.+.++++
T Consensus 337 ~~na~~v~~-~G~g~~l~~---~~~~~----~al~~lL~d~~~r~~a~~l~~~~~~~----~~~-~~~a~~le~l 398 (400)
T 4amg_A 337 DTNRDVLTG-LGIGFDAEA---GSLGA----EQCRRLLDDAGLREAALRVRQEMSEM----PPP-AETAAXLVAL 398 (400)
T ss_dssp HHHHHHHHH-HTSEEECCT---TTCSH----HHHHHHHHCHHHHHHHHHHHHHHHTS----CCH-HHHHHHHHHH
T ss_pred HHHHHHHHH-CCCEEEcCC---CCchH----HHHHHHHcCHHHHHHHHHHHHHHHcC----CCH-HHHHHHHHHh
Confidence 999999999 699999974 55554 56788999999999999999999874 233 3344455544
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.3e-43 Score=348.79 Aligned_cols=366 Identities=14% Similarity=0.116 Sum_probs=248.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCC-C-CCChHHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWE-E-RTDPGKL 81 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-~~~~~~~ 81 (459)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. ++++..++....... . .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchHH
Confidence 5899999999999999999999999999999999998887777665 788888875432110 0 1111111
Q ss_pred HHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCC-Ccch--HHHHHHHcCCceEEEeCcchhHHHHHhhcccccccCCCC
Q 012652 82 IEKVLQVMPGKLEELIEEINGRDDEKIDCFISDG-FMGW--SMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDGIID 158 (459)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~-~~~~--~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (459)
...+ +.....++++.+.... .+||+||+|. +..+ +..+|+.+|||++.+.+++..... .+.+
T Consensus 72 ~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~~p 136 (415)
T 1iir_A 72 VRRF---TTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PYYP 136 (415)
T ss_dssp HHHH---HHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSC
T ss_pred HHHH---HHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cccC
Confidence 1111 1222233333333101 7999999997 5668 899999999999999877643100 0000
Q ss_pred CCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHh------------hccCCEEEEcCCcc
Q 012652 159 SNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKA------------MKVADFQFCNSTYE 226 (459)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~~~~ 226 (459)
.... .. .+++ ......+. ..+...... ..+.....+.... .... .++++++++
T Consensus 137 ~~~~-----~~-~~~~--~~~~n~~~-~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (415)
T 1iir_A 137 PPPL-----GE-PSTQ--DTIDIPAQ-WERNNQSAY-----QRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPV 201 (415)
T ss_dssp CCC-----------------CHHHHH-HHHHHHHHH-----HHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTT
T ss_pred CccC-----Cc-cccc--hHHHHHHH-HHHHHHHHH-----HHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChh
Confidence 0000 00 0000 00000000 000000000 0000000011000 1122 689999999
Q ss_pred Cch-hhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCC
Q 012652 227 LEP-GAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRP 305 (459)
Q Consensus 227 l~~-~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 305 (459)
+++ +...+ ++++|||+..+.. ++.+.++.+|++.. +++|||++||.. ...+.+..+++++++.+.+
T Consensus 202 l~~~~~~~~--~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~ 268 (415)
T 1iir_A 202 LAPLQPTDL--DAVQTGAWILPDE--------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRR 268 (415)
T ss_dssp TSCCCCCSS--CCEECCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCC
T ss_pred hcCCCcccC--CeEeeCCCccCcc--------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCe
Confidence 987 52333 8999999986532 24567889999764 469999999986 5678888999999999999
Q ss_pred EEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchh
Q 012652 306 FLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLN 385 (459)
Q Consensus 306 ~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~n 385 (459)
++|+++... .. . +..++|+++.+|+||.++|+.+++ ||||||+||+.||+++|||+|++|...||..|
T Consensus 269 ~v~~~g~~~----~~-~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 336 (415)
T 1iir_A 269 VILSRGWAD----LV-L-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYY 336 (415)
T ss_dssp EEECTTCTT----CC-C-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred EEEEeCCCc----cc-c-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHH
Confidence 999887541 11 1 123567899999999999988777 99999999999999999999999999999999
Q ss_pred hhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012652 386 ESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMS 438 (459)
Q Consensus 386 a~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 438 (459)
|+++++ +|+|+.++. ..++.++|.++|.++ +|++|+++++++++.+++
T Consensus 337 a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 337 AGRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARATAVAGTIRT 384 (415)
T ss_dssp HHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS
T ss_pred HHHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh
Confidence 999998 699999874 678999999999999 999999999999988764
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.3e-43 Score=344.57 Aligned_cols=366 Identities=14% Similarity=0.040 Sum_probs=253.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCC---CCCChHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWE---ERTDPGK 80 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~ 80 (459)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. ++++..++....... .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 5899999999999999999999999999999999998888888776 788888875432111 0111111
Q ss_pred HHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCC-cch--HHHHHHHcCCceEEEeCcchhHHHHHhhcccccccCCC
Q 012652 81 LIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGF-MGW--SMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDGII 157 (459)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~-~~~--~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (459)
....+. .....++++.+++.. .+||+||+|.+ .++ +..+|+.+|||++.+.+++..... .+
T Consensus 72 ~~~~~~---~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~- 135 (416)
T 1rrv_A 72 EEQRLA---AMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PH- 135 (416)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SS-
T ss_pred HHHHHH---HHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------cc-
Confidence 121121 122234444443111 78999999973 456 888999999999998876543100 00
Q ss_pred CCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHH------------HhhccCCEEEEcCCc
Q 012652 158 DSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTI------------KAMKVADFQFCNSTY 225 (459)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~ 225 (459)
.+ ...+ ++ ....... +.+.......+.+ +.+.....+.. +..... .+++++++
T Consensus 136 ----~p------~~~~-~~-~~~~r~~-n~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~ 200 (416)
T 1rrv_A 136 ----LP------PAYD-EP-TTPGVTD-IRVLWEERAARFA-DRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADP 200 (416)
T ss_dssp ----SC------CCBC-SC-CCTTCCC-HHHHHHHHHHHHH-HHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCT
T ss_pred ----cC------CCCC-CC-CCchHHH-HHHHHHHHHHHHH-HHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCc
Confidence 00 0000 00 0000000 0000000000000 00000011111 011223 79999999
Q ss_pred cCchhhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCccc-CCHHHHHHHHHHHhhCCC
Q 012652 226 ELEPGAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTV-LDHNQFQELALGLEICNR 304 (459)
Q Consensus 226 ~l~~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~ 304 (459)
+++++...+ ++++|||+..+.. ++.+.++.+|++.. +++|||++||... ...+.+..+++++++.+.
T Consensus 201 ~l~~~~~~~--~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~ 268 (416)
T 1rrv_A 201 VLAPLQPDV--DAVQTGAWLLSDE--------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGR 268 (416)
T ss_dssp TTSCCCSSC--CCEECCCCCCCCC--------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCCC--CeeeECCCccCcc--------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCC
Confidence 998763233 8899999987532 23567888999764 4699999999853 345678889999999999
Q ss_pred CEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccch
Q 012652 305 PFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFL 384 (459)
Q Consensus 305 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~ 384 (459)
+++|+++... .. . +..++|+.+.+|+||.++|+++++ ||||||+||+.||+++|||+|++|...||+.
T Consensus 269 ~~v~~~g~~~----~~-~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 336 (416)
T 1rrv_A 269 RVILSRGWTE----LV-L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPY 336 (416)
T ss_dssp CEEEECTTTT----CC-C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHH
T ss_pred eEEEEeCCcc----cc-c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHH
Confidence 9999987641 11 1 123578999999999999999887 9999999999999999999999999999999
Q ss_pred hhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012652 385 NESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMS 438 (459)
Q Consensus 385 na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 438 (459)
||+++++ .|+|+.++. ..+++++|.++|+++ .|++|+++++++++.+++
T Consensus 337 na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 337 FAGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC
T ss_pred HHHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh
Confidence 9999998 699999874 678999999999999 999999999999888764
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.4e-41 Score=334.46 Aligned_cols=373 Identities=15% Similarity=0.188 Sum_probs=270.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCC-----CCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEE-----RTD 77 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~ 77 (459)
++||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+++. ++.+..++..++.... ...
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhcccc
Confidence 58999999999999999999999999999999999998888888776 8999988765443210 111
Q ss_pred hHHHHHH-HHHhccHHHHHHHHHHhCCCCCCccEEEeC-CCcchHHHHHHHcCCceEEEeCcchhHHHHHhhcccccccC
Q 012652 78 PGKLIEK-VLQVMPGKLEELIEEINGRDDEKIDCFISD-GFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDG 155 (459)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D-~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~ 155 (459)
....+.. +.......+.++.+.+++ ++||+||+| ....++..+|+.+|||++.+.+......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~------------- 154 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE------------- 154 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-------------
Confidence 1122222 333444556677777777 899999999 7777899999999999998875543200
Q ss_pred CCCCCCCcccccccccc-CCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHh----------hcc-CCEEEEcC
Q 012652 156 IIDSNGTPIRKQMIQLA-PNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKA----------MKV-ADFQFCNS 223 (459)
Q Consensus 156 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~l~~~ 223 (459)
.+.......... ...+. .. ..+.+.+.+.... ... .+..++..
T Consensus 155 -----~~~~~~~~~~~~~~~~p~---------------~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~ 209 (415)
T 3rsc_A 155 -----HYSFSQDMVTLAGTIDPL---------------DL-----PVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFV 209 (415)
T ss_dssp -----SCCHHHHHHHHHTCCCGG---------------GC-----HHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESS
T ss_pred -----ccccccccccccccCChh---------------hH-----HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEc
Confidence 000000000000 00000 00 1111111111111 122 28899999
Q ss_pred CccCchhhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCC
Q 012652 224 TYELEPGAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICN 303 (459)
Q Consensus 224 ~~~l~~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 303 (459)
.++++++...+..++.++||+...... ..+|....+++++||+++||......+.+..+++++++.+
T Consensus 210 ~~~~~~~~~~~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~ 276 (415)
T 3rsc_A 210 PKAFQIAGDTFDDRFVFVGPCFDDRRF-------------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP 276 (415)
T ss_dssp CTTTSTTGGGCCTTEEECCCCCCCCGG-------------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS
T ss_pred CcccCCCcccCCCceEEeCCCCCCccc-------------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCC
Confidence 999998756667789999998654321 1134444456789999999987667788999999999888
Q ss_pred CCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccc
Q 012652 304 RPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQF 383 (459)
Q Consensus 304 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~ 383 (459)
.+++|.++..... +. .+..++|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||+
T Consensus 277 ~~~v~~~g~~~~~-------~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~ 346 (415)
T 3rsc_A 277 WHVVMTLGGQVDP-------AA-LGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQ 346 (415)
T ss_dssp CEEEEECTTTSCG-------GG-GCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGH
T ss_pred cEEEEEeCCCCCh-------HH-hcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHH
Confidence 8888888754111 11 1124678999999999999999888 999999999999999999999999999999
Q ss_pred hhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHH
Q 012652 384 LNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLEW 456 (459)
Q Consensus 384 ~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 456 (459)
.||.++++ .|+|+.+.. .+++++.|.++|.++|+|++++++++++++.+.+ .++..+..+.+.+.
T Consensus 347 ~~a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 411 (415)
T 3rsc_A 347 PMARRVDQ-LGLGAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAVEAY 411 (415)
T ss_dssp HHHHHHHH-HTCEEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCEEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHH
Confidence 99999999 699999974 6789999999999999999999999999999886 35555555554443
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.7e-41 Score=330.99 Aligned_cols=375 Identities=15% Similarity=0.186 Sum_probs=270.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCC-----CC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWE-----ER 75 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~ 75 (459)
|+++||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+++. ++.+..++..++... ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccc
Confidence 7777999999999999999999999999999999999998888888765 889988875433221 12
Q ss_pred CChHHHHHH-HHHhccHHHHHHHHHHhCCCCCCccEEEeC-CCcchHHHHHHHcCCceEEEeCcchhHHHHHhhcccccc
Q 012652 76 TDPGKLIEK-VLQVMPGKLEELIEEINGRDDEKIDCFISD-GFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLID 153 (459)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D-~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~ 153 (459)
.+....+.. +.......+.++.+.+++ ++||+||+| ....++..+|+.+|||++.+.+.......
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~---------- 139 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH---------- 139 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT----------
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc----------
Confidence 233333443 444444556677777777 899999999 77778999999999999988755432100
Q ss_pred cCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHh----------hccC-CEEEEc
Q 012652 154 DGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKA----------MKVA-DFQFCN 222 (459)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~~ 222 (459)
+.............. .... ..+.+...+.... .... +..++.
T Consensus 140 --------~~~~~~~~~~~~~~~--------------~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~ 192 (402)
T 3ia7_A 140 --------YSLFKELWKSNGQRH--------------PADV-----EAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVF 192 (402)
T ss_dssp --------BCHHHHHHHHHTCCC--------------GGGS-----HHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEES
T ss_pred --------ccccccccccccccC--------------hhhH-----HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEE
Confidence 000000000000000 0000 1111111111110 1222 788888
Q ss_pred CCccCchhhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhC
Q 012652 223 STYELEPGAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEIC 302 (459)
Q Consensus 223 ~~~~l~~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~ 302 (459)
..++++++...+..++.+|||+....... .+|....+++++||+++||......+.+..+++++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~vGp~~~~~~~~-------------~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~ 259 (402)
T 3ia7_A 193 LPKSFQPFAETFDERFAFVGPTLTGRDGQ-------------PGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADT 259 (402)
T ss_dssp SCGGGSTTGGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTS
T ss_pred cChHhCCccccCCCCeEEeCCCCCCcccC-------------CCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcC
Confidence 88998887555677899999986543211 13444445678999999999776777899999999988
Q ss_pred CCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceecccc-ccc
Q 012652 303 NRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPY-FVD 381 (459)
Q Consensus 303 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~-~~D 381 (459)
+.++++.++..... +. .+..++|+++.+|+|+.++|+++|+ ||||||+||+.||+++|+|+|++|. ..|
T Consensus 260 ~~~~~~~~g~~~~~-------~~-~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~ 329 (402)
T 3ia7_A 260 PWHVVMAIGGFLDP-------AV-LGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATE 329 (402)
T ss_dssp SCEEEEECCTTSCG-------GG-GCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGG
T ss_pred CcEEEEEeCCcCCh-------hh-hCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCccc
Confidence 88888887754111 11 1124678999999999999999988 9999999999999999999999999 999
Q ss_pred cchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHH
Q 012652 382 QFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLE 455 (459)
Q Consensus 382 Q~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (459)
|..||.++++ .|+|+.+.. .+++++.|.+++.++|+|++++++++++++.+.+ .++..+..+.+.+
T Consensus 330 q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 395 (402)
T 3ia7_A 330 AAPSAERVIE-LGLGSVLRP---DQLEPASIREAVERLAADSAVRERVRRMQRDILS----SGGPARAADEVEA 395 (402)
T ss_dssp GHHHHHHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh----CChHHHHHHHHHH
Confidence 9999999999 699999974 6789999999999999999999999999999876 3455555554443
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3.2e-41 Score=330.17 Aligned_cols=351 Identities=16% Similarity=0.140 Sum_probs=251.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCC--CCCChHHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWE--ERTDPGKL 81 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~ 81 (459)
|||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+++. ++.+..++....... ........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 6899999999999999999999999999999999999988888876 788888874432110 00011111
Q ss_pred HHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchH---HHHHHHcCCceEEEeCcchhHHHHHhhcccccccCCCC
Q 012652 82 IEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWS---MEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDGIID 158 (459)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~---~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (459)
...+.......++++...+ .+||+||+|.....+ ..+|+.+|||++.+..++....
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~---------------- 130 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLP---------------- 130 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSG----------------
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCC----------------
Confidence 1112222233344444333 469999998665533 7889999999999887765310
Q ss_pred CCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhh-----------ccCCEEEEcCCccC
Q 012652 159 SNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAM-----------KVADFQFCNSTYEL 227 (459)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~~~l 227 (459)
.. .. ...|. ......+ +.+.+...+....+ ...+..+.+..+.+
T Consensus 131 -----~~--------~~------~~~~~-~~~~~~~-----~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l 185 (404)
T 3h4t_A 131 -----SE--------QS------QAERD-MYNQGAD-----RLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVL 185 (404)
T ss_dssp -----GG--------SC------HHHHH-HHHHHHH-----HHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTT
T ss_pred -----Ch--------hH------HHHHH-HHHHHHH-----HHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcce
Confidence 00 00 00000 0000000 00001111111110 11344567888888
Q ss_pred chhhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEE
Q 012652 228 EPGAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFL 307 (459)
Q Consensus 228 ~~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i 307 (459)
.+. .++.++++++|++..+.. .+.++++.+|++.. +++|||++||... ..+.+..+++++++.+.++|
T Consensus 186 ~p~-~~~~~~~~~~G~~~~~~~--------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv 253 (404)
T 3h4t_A 186 SPL-RPTDLGTVQTGAWILPDQ--------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVV 253 (404)
T ss_dssp SCC-CTTCCSCCBCCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEE
T ss_pred eCC-CCCCCCeEEeCccccCCC--------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEE
Confidence 665 567789999998876532 24667888998753 5799999999876 67789999999999999999
Q ss_pred EEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchhhh
Q 012652 308 WVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNES 387 (459)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~ 387 (459)
|+.+... ...+ ..++|+++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|+..||+.||.
T Consensus 254 ~~~g~~~----~~~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~ 321 (404)
T 3h4t_A 254 LSSGWAG----LGRI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAG 321 (404)
T ss_dssp EECTTTT----CCCS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred EEeCCcc----cccc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHH
Confidence 9987541 1111 12578999999999999999888 9999999999999999999999999999999999
Q ss_pred hhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012652 388 YICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMS 438 (459)
Q Consensus 388 rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 438 (459)
++++ .|+|+.+.. ..++++.|.++|.++++ ++|+++++++++.+.+
T Consensus 322 ~~~~-~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 322 RVAD-LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHH-HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC
T ss_pred HHHH-CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh
Confidence 9999 699999974 67899999999999998 9999999999887753
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.5e-40 Score=324.63 Aligned_cols=373 Identities=17% Similarity=0.179 Sum_probs=258.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCC-----C
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEE-----R 75 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~ 75 (459)
|+++||+|++.++.||++|++.||++|+++||+|++++++...+.+.+. ++++..++...+.... .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCcCccccccccccc
Confidence 3457999999999999999999999999999999999998877666554 7888888765432211 1
Q ss_pred CChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHhhcccccccC
Q 012652 76 TDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDG 155 (459)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~ 155 (459)
.+....+..+...+...+..+.+.+++ .+||+||+|.+..++..+|+.+|||++.+++........ ...+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-~~~~~----- 146 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGY-EEEVA----- 146 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTH-HHHTH-----
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccc-ccccc-----
Confidence 233333333333344556666677766 899999999877788999999999999988654311000 00000
Q ss_pred CCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHH----------hhccCCEEEEcCCc
Q 012652 156 IIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIK----------AMKVADFQFCNSTY 225 (459)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~ 225 (459)
.. ........ + .. ..+.....+... ....++.+++++.+
T Consensus 147 --------~~--~~~~~~~~--------~-------~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 195 (430)
T 2iyf_A 147 --------EP--MWREPRQT--------E-------RG------RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPK 195 (430)
T ss_dssp --------HH--HHHHHHHS--------H-------HH------HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCG
T ss_pred --------cc--hhhhhccc--------h-------HH------HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcH
Confidence 00 00000000 0 00 000011111111 11246889999999
Q ss_pred cCchhhhccCCc-cccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhC-C
Q 012652 226 ELEPGAFNMIPE-LLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEIC-N 303 (459)
Q Consensus 226 ~l~~~~~~~~p~-v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~ 303 (459)
.++++...+.++ +++|||........ .+|....+++++||+++||......+.+..+++++++. +
T Consensus 196 ~~~~~~~~~~~~~v~~vG~~~~~~~~~-------------~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~ 262 (430)
T 2iyf_A 196 ALQPHADRVDEDVYTFVGACQGDRAEE-------------GGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPG 262 (430)
T ss_dssp GGSTTGGGSCTTTEEECCCCC-----C-------------CCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTT
T ss_pred HhCCCcccCCCccEEEeCCcCCCCCCC-------------CCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCC
Confidence 998764456678 99999865321100 12333334578999999998755667888999999875 7
Q ss_pred CCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccc
Q 012652 304 RPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQF 383 (459)
Q Consensus 304 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~ 383 (459)
.+++|+++..... +.+ +..++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||.
T Consensus 263 ~~~~~~~G~~~~~-------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~ 332 (430)
T 2iyf_A 263 WHLVLQIGRKVTP-------AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQF 332 (430)
T ss_dssp EEEEEECC---CG-------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHH
T ss_pred eEEEEEeCCCCCh-------HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchH
Confidence 7888887654110 111 124578999999999999999998 999999999999999999999999999999
Q ss_pred hhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHH
Q 012652 384 LNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNF 453 (459)
Q Consensus 384 ~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 453 (459)
.|+.++++ .|+|+.+.. ..++.++|.++|.++++|++++++++++++.+.+. ++..+.++.+
T Consensus 333 ~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i 394 (430)
T 2iyf_A 333 GNADMLQG-LGVARKLAT---EEATADLLRETALALVDDPEVARRLRRIQAEMAQE----GGTRRAADLI 394 (430)
T ss_dssp HHHHHHHH-TTSEEECCC---C-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH----CHHHHHHHHH
T ss_pred HHHHHHHH-cCCEEEcCC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc----CcHHHHHHHH
Confidence 99999998 699999874 66899999999999999999999999999988763 4444444444
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=3.8e-40 Score=326.62 Aligned_cols=356 Identities=13% Similarity=0.140 Sum_probs=241.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCC---------
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPW--------- 72 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~--------- 72 (459)
.+|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. ++.+..++...+..
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhcc
Confidence 368999999999999999999999999999999999998887777665 88898887543100
Q ss_pred -------CC-----CC--ChH---HHHHHHHHh----c-cH-HHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCC
Q 012652 73 -------EE-----RT--DPG---KLIEKVLQV----M-PG-KLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKL 129 (459)
Q Consensus 73 -------~~-----~~--~~~---~~~~~~~~~----~-~~-~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~gi 129 (459)
.. .. ... .....+... . .. .+.++++.+++ ++||+||+|.+..++..+|+.+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCC
Confidence 00 00 111 111112111 1 13 66777776666 899999999987889999999999
Q ss_pred ceEEEeCcchhHHHHHhhcccccccCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHH
Q 012652 130 RRAVIWTSCAASVASIFCIPKLIDDGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRT 209 (459)
Q Consensus 130 P~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
|++.+...+.........+... ....+. .. .. ..+.+.+.+.
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~-----------------~~~~~~---~~--------~~----------~~~~~~l~~~ 208 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGL-----------------LPDQPE---EH--------RE----------DPLAEWLTWT 208 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHH-----------------GGGSCT---TT--------CC----------CHHHHHHHHH
T ss_pred CEEEEecCCCcchhhhhhhhhh-----------------cccccc---cc--------cc----------chHHHHHHHH
Confidence 9998865443211100000000 000000 00 00 0011111111
Q ss_pred HHh---------hccCCEEEEcCCccCchhhhccC-CccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEE
Q 012652 210 IKA---------MKVADFQFCNSTYELEPGAFNMI-PELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYV 279 (459)
Q Consensus 210 ~~~---------~~~~~~~l~~~~~~l~~~~~~~~-p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~v 279 (459)
... ....+.++..+.+.++++ ..++ ..+.++++ . .+.++.+|++..+++++|||
T Consensus 209 ~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~---~------------~~~~~~~~l~~~~~~~~v~v 272 (441)
T 2yjn_A 209 LEKYGGPAFDEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVDY---N------------GPSVVPEWLHDEPERRRVCL 272 (441)
T ss_dssp HHHTTCCCCCGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCCC---C------------SSCCCCGGGSSCCSSCEEEE
T ss_pred HHHcCCCCCCccccCCCeEEEecCccccCC-CCCCCCceeeeCC---C------------CCcccchHhhcCCCCCEEEE
Confidence 111 112455677666666653 2322 12233311 0 11223478876566789999
Q ss_pred EeCCcccC---CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceee
Q 012652 280 AFGSHTVL---DHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLS 356 (459)
Q Consensus 280 s~Gs~~~~---~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~ 356 (459)
++||.... ..+.+..+++++++.+.++||+.++. ....+. ..++|+++.+|+||.++|+.+++ |||
T Consensus 273 ~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~ 341 (441)
T 2yjn_A 273 TLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA-----NIPDNVRTVGFVPMHALLPTCAA--TVH 341 (441)
T ss_dssp EC----------CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS-----SCCSSEEECCSCCHHHHGGGCSE--EEE
T ss_pred ECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc-----cCCCCEEEecCCCHHHHHhhCCE--EEE
Confidence 99998643 33567788899988899999988754 112221 13578999999999999999888 999
Q ss_pred ccCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 012652 357 HCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEIT 436 (459)
Q Consensus 357 HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~ 436 (459)
|||+||+.||+++|||+|++|...||+.||.++++ .|+|+.++. .+++.+.|.++|.++|+|++|+++++++++.+
T Consensus 342 ~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 417 (441)
T 2yjn_A 342 HGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLDDPAHRAGAARMRDDM 417 (441)
T ss_dssp CCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 699999874 67899999999999999999999999999998
Q ss_pred Hh
Q 012652 437 MS 438 (459)
Q Consensus 437 ~~ 438 (459)
.+
T Consensus 418 ~~ 419 (441)
T 2yjn_A 418 LA 419 (441)
T ss_dssp HT
T ss_pred Hc
Confidence 76
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=4.6e-39 Score=313.26 Aligned_cols=350 Identities=13% Similarity=0.128 Sum_probs=250.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCC--------C--
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPW--------E-- 73 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~--------~-- 73 (459)
|||+|++.++.||++|++.||++|+++||+|++++++...+.+.+. ++.+..++...... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 5899999999999999999999999999999999998877766665 78888776532000 0
Q ss_pred CC-C--ChHHHH-HH-HHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHhhc
Q 012652 74 ER-T--DPGKLI-EK-VLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCI 148 (459)
Q Consensus 74 ~~-~--~~~~~~-~~-~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~ 148 (459)
.. . .....+ .. +...+...+.++.+.+++ .+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 01 1 111111 11 222233345556555555 89999999988778889999999999987532210
Q ss_pred ccccccCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHh-----hccCCEEEEcC
Q 012652 149 PKLIDDGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKA-----MKVADFQFCNS 223 (459)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~ 223 (459)
. ..+ . ..+.....+.... ...++.+++++
T Consensus 141 --------------~------------~~~-----~---------------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 174 (384)
T 2p6p_A 141 --------------A------------DGI-----H---------------PGADAELRPELSELGLERLPAPDLFIDIC 174 (384)
T ss_dssp --------------C------------TTT-----H---------------HHHHHHTHHHHHHTTCSSCCCCSEEEECS
T ss_pred --------------c------------chh-----h---------------HHHHHHHHHHHHHcCCCCCCCCCeEEEEC
Confidence 0 000 0 0000001111111 11267899999
Q ss_pred CccCchhhhccC-CccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccC-----CHHHHHHHHH
Q 012652 224 TYELEPGAFNMI-PELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVL-----DHNQFQELAL 297 (459)
Q Consensus 224 ~~~l~~~~~~~~-p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~ 297 (459)
.+.++++ .+++ +++.+++. . .+.++.+|++..+++++||+++||.... ..+.+..+++
T Consensus 175 ~~~~~~~-~~~~~~~~~~~~~-~--------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~ 238 (384)
T 2p6p_A 175 PPSLRPA-NAAPARMMRHVAT-S--------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAK 238 (384)
T ss_dssp CGGGSCT-TSCCCEECCCCCC-C--------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHH
T ss_pred CHHHCCC-CCCCCCceEecCC-C--------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHH
Confidence 9988865 3333 24445431 1 0122347887655578999999998654 4477889999
Q ss_pred HHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccc
Q 012652 298 GLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWP 377 (459)
Q Consensus 298 a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P 377 (459)
++++.+.+++|+.++. ..+.+ +..++|+.+ +|+||.++|+++++ ||||||+||+.||+++|+|+|++|
T Consensus 239 al~~~~~~~~~~~g~~--------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p 306 (384)
T 2p6p_A 239 DLVRWDVELIVAAPDT--------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIP 306 (384)
T ss_dssp HHHTTTCEEEEECCHH--------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECC
T ss_pred HHhcCCcEEEEEeCCC--------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEcc
Confidence 9988899999987632 01111 245789999 99999999999888 999999999999999999999999
Q ss_pred cccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHH
Q 012652 378 YFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLE 455 (459)
Q Consensus 378 ~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (459)
...||..||.++++ .|+|+.++. ..++.++|.++|.++|+|++++++++++++.+++. .+..+.++.+.+
T Consensus 307 ~~~dq~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 376 (384)
T 2p6p_A 307 KGSVLEAPARRVAD-YGAAIALLP---GEDSTEAIADSCQELQAKDTYARRAQDLSREISGM----PLPATVVTALEQ 376 (384)
T ss_dssp CSHHHHHHHHHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTS----CCHHHHHHHHHH
T ss_pred CcccchHHHHHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhC----CCHHHHHHHHHH
Confidence 99999999999999 699999874 56899999999999999999999999999999873 455455544433
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=7.9e-38 Score=305.98 Aligned_cols=341 Identities=13% Similarity=0.109 Sum_probs=227.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCC---------CC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEP---------WE 73 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~---------~~ 73 (459)
+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+.+. ++.+..++..... ..
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccCc
Confidence 68999999999999999999999999999999999998888888776 6777776531110 00
Q ss_pred ---CCCCh----HHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHHHh
Q 012652 74 ---ERTDP----GKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVASIF 146 (459)
Q Consensus 74 ---~~~~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~ 146 (459)
..... ......+.......+.++.+.+++ ++||+|++|...+++..+|+.+|||++.+...........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~- 161 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK- 161 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH-
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh-
Confidence 00111 111222222333444555555555 8999999998777899999999999998765432110000
Q ss_pred hcccccccCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHh-----hccCCEEEE
Q 012652 147 CIPKLIDDGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKA-----MKVADFQFC 221 (459)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~ 221 (459)
....+.+.+.... ....+..+.
T Consensus 162 -----------------------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~ 188 (398)
T 4fzr_A 162 -----------------------------------------------------SAGVGELAPELAELGLTDFPDPLLSID 188 (398)
T ss_dssp -----------------------------------------------------HHHHHHTHHHHHTTTCSSCCCCSEEEE
T ss_pred -----------------------------------------------------HHHHHHHHHHHHHcCCCCCCCCCeEEE
Confidence 0000111111111 123355666
Q ss_pred cCCccCchhhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccC--------CHHHHH
Q 012652 222 NSTYELEPGAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVL--------DHNQFQ 293 (459)
Q Consensus 222 ~~~~~l~~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~ 293 (459)
...+.++.+.......+.++++.. ....+.+|+...+++++||+++||.... ..+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~ 254 (398)
T 4fzr_A 189 VCPPSMEAQPKPGTTKMRYVPYNG--------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQ 254 (398)
T ss_dssp CSCGGGC----CCCEECCCCCCCC--------------SSCCCCHHHHSCCSSCEEECC----------------CCSHH
T ss_pred eCChhhCCCCCCCCCCeeeeCCCC--------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHH
Confidence 666666544111111122332110 1122346776656688999999998543 335688
Q ss_pred HHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCce
Q 012652 294 ELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPF 373 (459)
Q Consensus 294 ~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~ 373 (459)
.+++++++.+.+++|+.++. .. +. .+..++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+
T Consensus 255 ~~~~al~~~~~~~v~~~~~~----~~----~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~ 323 (398)
T 4fzr_A 255 ALSQELPKLGFEVVVAVSDK----LA----QT-LQPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQ 323 (398)
T ss_dssp HHHHHGGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCE
T ss_pred HHHHHHHhCCCEEEEEeCCc----ch----hh-hccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCE
Confidence 89999988899998887654 11 11 1234688999999999999999888 99999999999999999999
Q ss_pred eccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012652 374 LCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMS 438 (459)
Q Consensus 374 v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~ 438 (459)
|++|...||..|+.++++ .|+|+.++. ..++++.|.++|.++|+|++++++++++++.+.+
T Consensus 324 v~~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 324 VSVPVIAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp EECCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHCTHHHHHHHHHHHHHTT
T ss_pred EecCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc
Confidence 999999999999999999 699999974 6789999999999999999999999999998876
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=9.5e-37 Score=298.30 Aligned_cols=353 Identities=13% Similarity=0.149 Sum_probs=238.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCC----------
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPW---------- 72 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~---------- 72 (459)
+|||+|++.++.||++|++.||++|.++||+|+++++ .+.+.+... ++.+..++......
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccCC
Confidence 5899999999999999999999999999999999999 887777765 88998887432100
Q ss_pred ---------CCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHH
Q 012652 73 ---------EERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVA 143 (459)
Q Consensus 73 ---------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~ 143 (459)
............+.......+.++.+.+++ ++||+|++|...+++..+|+.+|||++.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~-- 164 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD---YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT-- 164 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC--
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH---cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc--
Confidence 001111111222222223334445554544 899999999888889999999999999765432110
Q ss_pred HHhhcccccccCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcC
Q 012652 144 SIFCIPKLIDDGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNS 223 (459)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (459)
.. .. .... ........+........+..+...
T Consensus 165 --------------------------------~~--~~----~~~~----------~~l~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T 3oti_A 165 --------------------------------RG--MH----RSIA----------SFLTDLMDKHQVSLPEPVATIESF 196 (398)
T ss_dssp --------------------------------TT--HH----HHHH----------TTCHHHHHHTTCCCCCCSEEECSS
T ss_pred --------------------------------cc--hh----hHHH----------HHHHHHHHHcCCCCCCCCeEEEeC
Confidence 00 00 0000 000000000000012234556555
Q ss_pred CccCchhhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccC--CHHHHHHHHHHHhh
Q 012652 224 TYELEPGAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVL--DHNQFQELALGLEI 301 (459)
Q Consensus 224 ~~~l~~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~a~~~ 301 (459)
.+.+..+.......+.++ |.. ......+|+...+++++||+++||.... ..+.+..+++++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~-~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 3oti_A 197 PPSLLLEAEPEGWFMRWV-PYG--------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE 261 (398)
T ss_dssp CGGGGTTSCCCSBCCCCC-CCC--------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT
T ss_pred CHHHCCCCCCCCCCcccc-CCC--------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc
Confidence 555554310111111222 100 1112224555555688999999998432 55678889999988
Q ss_pred CCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccc
Q 012652 302 CNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVD 381 (459)
Q Consensus 302 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~D 381 (459)
.+.+++|+.++. .. +.+ +..++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...|
T Consensus 262 ~~~~~v~~~g~~----~~----~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~d 330 (398)
T 3oti_A 262 VDADFVLALGDL----DI----SPL-GTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRD 330 (398)
T ss_dssp SSSEEEEECTTS----CC----GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTC
T ss_pred CCCEEEEEECCc----Ch----hhh-ccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCch
Confidence 899999988764 11 111 124678999999999999999888 9999999999999999999999999999
Q ss_pred cchhh--hhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012652 382 QFLNE--SYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLEWV 457 (459)
Q Consensus 382 Q~~na--~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (459)
|..|+ .++++ .|+|+.++. ...+++.|. ++|+|++++++++++++.+.+. .+. ..+.+.++++
T Consensus 331 q~~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~l~~l 395 (398)
T 3oti_A 331 QFQHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIGDESLRTAAREVREEMVAL----PTP-AETVRRIVER 395 (398)
T ss_dssp CSSCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHHCHHHHHHHHHHHHHHHTS----CCH-HHHHHHHHHH
T ss_pred hHHHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHcCHHHHHHHHHHHHHHHhC----CCH-HHHHHHHHHH
Confidence 99999 99999 699999974 566777776 8899999999999999998862 444 4444445544
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=4e-36 Score=293.18 Aligned_cols=351 Identities=13% Similarity=0.145 Sum_probs=241.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEec-CCCCCCCC--------
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSI-PDGMEPWE-------- 73 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i-~~~~~~~~-------- 73 (459)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..+ ........
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 58999999999999999999999999999999999998777777765 7777777 32111000
Q ss_pred -----CCCChHHHHHHHHHhccHH-------HHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhH
Q 012652 74 -----ERTDPGKLIEKVLQVMPGK-------LEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAAS 141 (459)
Q Consensus 74 -----~~~~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~ 141 (459)
...........+....... +.++.+.+++ ++||+|++|...+.+..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 0000011222222222222 5555555555 899999999877788889999999999865432210
Q ss_pred HHHHhhcccccccCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhh-----ccC
Q 012652 142 VASIFCIPKLIDDGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAM-----KVA 216 (459)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 216 (459)
. .... ....++..+..... ...
T Consensus 149 ----------------------------------~----~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 175 (391)
T 3tsa_A 149 ----------------------------------A----GPFS---------------DRAHELLDPVCRHHGLTGLPTP 175 (391)
T ss_dssp ----------------------------------T----THHH---------------HHHHHHHHHHHHHTTSSSSCCC
T ss_pred ----------------------------------c----cccc---------------chHHHHHHHHHHHcCCCCCCCC
Confidence 0 0000 11111122222111 223
Q ss_pred CEEEEcCCccCchhhhccCCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCccc--CC-HHHHH
Q 012652 217 DFQFCNSTYELEPGAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTV--LD-HNQFQ 293 (459)
Q Consensus 217 ~~~l~~~~~~l~~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~ 293 (459)
+.++..+.++++.+.......+.++ |.. .......|+...+++++|++++||... .. .+.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~-p~~--------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~ 240 (391)
T 3tsa_A 176 ELILDPCPPSLQASDAPQGAPVQYV-PYN--------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLR 240 (391)
T ss_dssp SEEEECSCGGGSCTTSCCCEECCCC-CCC--------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHH
T ss_pred ceEEEecChhhcCCCCCccCCeeee-cCC--------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHH
Confidence 6777777777765421111223333 111 111223566655668899999999832 23 67788
Q ss_pred HHHHHHhhC-CCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCc
Q 012652 294 ELALGLEIC-NRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIP 372 (459)
Q Consensus 294 ~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP 372 (459)
.++++ ++. +.+++|+.++. ....+. ..++|+.+.+|+|+.++|+++|+ ||||||.||+.||+++|+|
T Consensus 241 ~~~~~-~~~p~~~~v~~~~~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P 308 (391)
T 3tsa_A 241 AVAAA-TELPGVEAVIAVPPE----HRALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIP 308 (391)
T ss_dssp HHHHH-HTSTTEEEEEECCGG----GGGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCC
T ss_pred HHHHh-ccCCCeEEEEEECCc----chhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCC
Confidence 88888 877 67888887643 111111 23678999999999999999888 9999999999999999999
Q ss_pred eeccccccccchhhhhhhceeeeeeeeecCCC--CcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHH
Q 012652 373 FLCWPYFVDQFLNESYICDIWKVGLKLDKDES--GIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTF 450 (459)
Q Consensus 373 ~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~--~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 450 (459)
+|++|...||..|+.++++ .|+|+.+. . ...+++.|.+++.++|+|++++++++++++.+.+ ..+..+.+
T Consensus 309 ~v~~p~~~~q~~~a~~~~~-~g~g~~~~---~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~ 380 (391)
T 3tsa_A 309 QLVLPQYFDQFDYARNLAA-AGAGICLP---DEQAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA----MPHPAALV 380 (391)
T ss_dssp EEECCCSTTHHHHHHHHHH-TTSEEECC---SHHHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT----SCCHHHHH
T ss_pred EEecCCcccHHHHHHHHHH-cCCEEecC---cccccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc----CCCHHHHH
Confidence 9999999999999999999 69999985 2 2478999999999999999999999999998876 35554544
Q ss_pred HHH
Q 012652 451 QNF 453 (459)
Q Consensus 451 ~~~ 453 (459)
+.+
T Consensus 381 ~~i 383 (391)
T 3tsa_A 381 RTL 383 (391)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=2.5e-33 Score=275.31 Aligned_cols=357 Identities=17% Similarity=0.160 Sum_probs=244.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCC------------C
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGM------------E 70 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~------------~ 70 (459)
+|||+|++.++.||++|++.||++|+++||+|++++++...+.+.+. ++.+..++..+ .
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhhc
Confidence 68999999999999999999999999999999999998776666665 88888877410 0
Q ss_pred C-CCCCCChH----HHHHHHHHh-ccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcchhHHHH
Q 012652 71 P-WEERTDPG----KLIEKVLQV-MPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCAASVAS 144 (459)
Q Consensus 71 ~-~~~~~~~~----~~~~~~~~~-~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~ 144 (459)
. ........ .....+... ....+.++.+.+++ .+||+|++|....++..+|+.+|||++............
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~ 167 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDL 167 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHH
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhh
Confidence 0 00000011 111111111 12223444444444 899999999877788889999999999865432210000
Q ss_pred HhhcccccccCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHh----------hc
Q 012652 145 IFCIPKLIDDGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKA----------MK 214 (459)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 214 (459)
. ....+...+.... ..
T Consensus 168 ---------------------------------------~---------------~~~~~~~~~~~~~~g~~~~~~~~~~ 193 (412)
T 3otg_A 168 ---------------------------------------T---------------RSIEEEVRGLAQRLGLDLPPGRIDG 193 (412)
T ss_dssp ---------------------------------------H---------------HHHHHHHHHHHHHTTCCCCSSCCGG
T ss_pred ---------------------------------------h---------------HHHHHHHHHHHHHcCCCCCcccccC
Confidence 0 1111111111111 13
Q ss_pred cCCEEEEcCCccCchhhhccCCccccccccccCCCCCCCCCCCCCCCchHHHH-hccCCCCeEEEEEeCCcccCCHHHHH
Q 012652 215 VADFQFCNSTYELEPGAFNMIPELLPVGPLLASNRLGNSAGHFWPEDSTCLKW-LDQQQPKSVIYVAFGSHTVLDHNQFQ 293 (459)
Q Consensus 215 ~~~~~l~~~~~~l~~~~~~~~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~ 293 (459)
.++.++..+.+.++.+......... |+..... .......+| ....+++++|++++|+......+.+.
T Consensus 194 ~~d~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~ 261 (412)
T 3otg_A 194 FGNPFIDIFPPSLQEPEFRARPRRH---ELRPVPF---------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLR 261 (412)
T ss_dssp GGCCEEECSCGGGSCHHHHTCTTEE---ECCCCCC---------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHH
T ss_pred CCCeEEeeCCHHhcCCcccCCCCcc---eeeccCC---------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHH
Confidence 4567788877777655221111111 1111111 011112245 23234578999999998766778899
Q ss_pred HHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhhcCCce
Q 012652 294 ELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPF 373 (459)
Q Consensus 294 ~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~ 373 (459)
.+++++++.+.+++|+.++... ...+. ..++|+.+.+|+|+.++|+++|+ ||+|||.+|+.||+++|+|+
T Consensus 262 ~~~~~l~~~~~~~~~~~g~~~~---~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~ 331 (412)
T 3otg_A 262 AAIDGLAGLDADVLVASGPSLD---VSGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQ 331 (412)
T ss_dssp HHHHHHHTSSSEEEEECCSSCC---CTTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHcCCCEEEEEECCCCC---hhhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCE
Confidence 9999998888899988876521 11121 13578999999999999999998 99999999999999999999
Q ss_pred eccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHH
Q 012652 374 LCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNF 453 (459)
Q Consensus 374 v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 453 (459)
|++|...||..|+.++++ .|+|..+.. ..+++++|.++|.++|+|+++++++++.++.+.+ ..+..+..+.+
T Consensus 332 v~~p~~~~q~~~~~~v~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 403 (412)
T 3otg_A 332 LSFPWAGDSFANAQAVAQ-AGAGDHLLP---DNISPDSVSGAAKRLLAEESYRAGARAVAAEIAA----MPGPDEVVRLL 403 (412)
T ss_dssp EECCCSTTHHHHHHHHHH-HTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH----SCCHHHHHTTH
T ss_pred EecCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc----CCCHHHHHHHH
Confidence 999999999999999999 699999974 5679999999999999999999999999888876 34554554444
Q ss_pred HH
Q 012652 454 LE 455 (459)
Q Consensus 454 ~~ 455 (459)
.+
T Consensus 404 ~~ 405 (412)
T 3otg_A 404 PG 405 (412)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.6e-28 Score=236.24 Aligned_cols=340 Identities=14% Similarity=0.094 Sum_probs=205.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc--hHHHHhhhhccCCCCCCeEEEecCC-CCCCCCCCCCh
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN--HKRVMKSLEGKNYLGEQIRLVSIPD-GMEPWEERTDP 78 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~ 78 (459)
=+.||+|...++.||++|.++||++|+++||+|+|+++... .+.+++. ++.++.++. +++.......+
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC-------------
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECCCcCCCCHHHHH
Confidence 04589999988889999999999999999999999997653 2334444 788887763 22221111111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcc--hHHHHHHHcCCceEEEeCcchhHHHHHhhcccccccCC
Q 012652 79 GKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMG--WSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDGI 156 (459)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~~ 156 (459)
...+.. .... .....++++ .+||+||++..+. .+..+|+.+|||++.... ..
T Consensus 72 ~~~~~~-~~~~-~~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~-n~----------------- 125 (365)
T 3s2u_A 72 KAPLEL-LKSL-FQALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ-NA----------------- 125 (365)
T ss_dssp -CHHHH-HHHH-HHHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-SS-----------------
T ss_pred HHHHHH-HHHH-HHHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-ch-----------------
Confidence 111111 1111 123345555 8999999997655 456778999999986321 10
Q ss_pred CCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchhhhccCC
Q 012652 157 IDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPGAFNMIP 236 (459)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~p 236 (459)
+||+. +++. .+.++.++.. +++. .+..+
T Consensus 126 ---------------~~G~~---------nr~l-----------------------~~~a~~v~~~-~~~~----~~~~~ 153 (365)
T 3s2u_A 126 ---------------VAGTA---------NRSL-----------------------APIARRVCEA-FPDT----FPASD 153 (365)
T ss_dssp ---------------SCCHH---------HHHH-----------------------GGGCSEEEES-STTS----SCC--
T ss_pred ---------------hhhhH---------HHhh-----------------------ccccceeeec-cccc----ccCcC
Confidence 01110 0000 0122333332 3221 12234
Q ss_pred ccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCC----CCEEEEEcC
Q 012652 237 ELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICN----RPFLWVVRP 312 (459)
Q Consensus 237 ~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~ 312 (459)
+++++|.......... .. ......++++.|++..||.... ...+.+.+++..+. ..++++++.
T Consensus 154 k~~~~g~pvr~~~~~~------~~-----~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~ 220 (365)
T 3s2u_A 154 KRLTTGNPVRGELFLD------AH-----ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGR 220 (365)
T ss_dssp -CEECCCCCCGGGCCC------TT-----SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCT
T ss_pred cEEEECCCCchhhccc------hh-----hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCc
Confidence 5667776554432210 00 0111223466899988887532 23344556665443 346666554
Q ss_pred CCCCCCCCCCChhHHHHhcCCceeecccchh-hhhcCCCccceeeccCchhHHHhhhcCCceeccccc----cccchhhh
Q 012652 313 DITTDANDVYPRGFQERVATRGQMIGWAPQQ-RVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----VDQFLNES 387 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~-~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~----~DQ~~na~ 387 (459)
. ....+ ....+..+.++.+.+|+++. ++|..+|+ +|||+|.+|+.|++++|+|+|++|+. .+|..||+
T Consensus 221 ~----~~~~~-~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~ 293 (365)
T 3s2u_A 221 Q----HAEIT-AERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAE 293 (365)
T ss_dssp T----THHHH-HHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHH
T ss_pred c----ccccc-cceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHH
Confidence 3 10011 11122456789999999985 79999999 99999999999999999999999963 58999999
Q ss_pred hhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012652 388 YICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLEWV 457 (459)
Q Consensus 388 rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (459)
.+++ .|+|+.+.. .+++++.|.++|.++|+|++.++ +|++.+++... ..+.+.|.+.+.++
T Consensus 294 ~l~~-~G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~---~m~~~a~~~~~--~~aa~~ia~~i~~l 354 (365)
T 3s2u_A 294 FLVR-SGAGRLLPQ---KSTGAAELAAQLSEVLMHPETLR---SMADQARSLAK--PEATRTVVDACLEV 354 (365)
T ss_dssp HHHT-TTSEEECCT---TTCCHHHHHHHHHHHHHCTHHHH---HHHHHHHHTCC--TTHHHHHHHHHHHH
T ss_pred HHHH-CCCEEEeec---CCCCHHHHHHHHHHHHCCHHHHH---HHHHHHHhcCC--ccHHHHHHHHHHHH
Confidence 9999 699999973 78899999999999999986544 44555554311 22344555555554
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=204.88 Aligned_cols=164 Identities=21% Similarity=0.410 Sum_probs=138.9
Q ss_pred CCCchHHHHhccCCCCeEEEEEeCCcc-cCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceee
Q 012652 259 PEDSTCLKWLDQQQPKSVIYVAFGSHT-VLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMI 337 (459)
Q Consensus 259 ~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~ 337 (459)
+.+.++.+|++..+++++||+++||.. ....+.+..+++++++.+.+++|+.++. .. + ..++|+++.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~----~~----~----~~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN----KP----D----TLGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS----CC----T----TCCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc----Cc----c----cCCCcEEEe
Confidence 567889999987766789999999985 4567888999999988889999998654 11 1 135789999
Q ss_pred cccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHH
Q 012652 338 GWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLV 417 (459)
Q Consensus 338 ~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~ 417 (459)
+|+||.++|.|+.+++||||||.+|++||+++|+|+|++|...||..||.++++ .|+|+.++. ..++.++|.++|.
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHH
Confidence 999999999555566699999999999999999999999999999999999999 699999974 6789999999999
Q ss_pred HHhCCHHHHHHHHHHHHHHHh
Q 012652 418 QVLGDQNFKARALELKEITMS 438 (459)
Q Consensus 418 ~ll~~~~~~~~a~~l~~~~~~ 438 (459)
+++.|++|+++++++++.+++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHCHHHHHHHHHHC-----
T ss_pred HHHcCHHHHHHHHHHHHHhhC
Confidence 999999999999999998863
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.89 E-value=2.3e-21 Score=186.69 Aligned_cols=336 Identities=13% Similarity=0.100 Sum_probs=203.5
Q ss_pred CCC--CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch--HHHHhhhhccCCCCCCeEEEecCCCCCCCCCCC
Q 012652 1 MSS--PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNH--KRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERT 76 (459)
Q Consensus 1 m~~--~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 76 (459)
|++ |||++++.+..||..++..||++|.++||+|++++..... ..+.+. ++.+..++..-.. ..
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~---~~ 69 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH---------GIEIDFIRISGLR---GK 69 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG---------TCEEEECCCCCCT---TC
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc---------CCceEEecCCccC---cC
Confidence 564 8999999877799999999999999999999999976532 223322 6777766532111 11
Q ss_pred ChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc--chHHHHHHHcCCceEEEeCcchhHHHHHhhccccccc
Q 012652 77 DPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM--GWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDD 154 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~--~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~ 154 (459)
.....+...... ...+..+.+.+++ .+||+|+++... ..+..+++.+|+|++.......
T Consensus 70 ~~~~~~~~~~~~-~~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~--------------- 130 (364)
T 1f0k_A 70 GIKALIAAPLRI-FNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI--------------- 130 (364)
T ss_dssp CHHHHHTCHHHH-HHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS---------------
T ss_pred ccHHHHHHHHHH-HHHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC---------------
Confidence 111111111100 1122333344443 799999998653 2456678889999986432110
Q ss_pred CCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchhhhcc
Q 012652 155 GIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPGAFNM 234 (459)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 234 (459)
++ .. . ++ ..+.++.+++.+...
T Consensus 131 ------------------~~--------~~---------------~---~~------~~~~~d~v~~~~~~~-------- 152 (364)
T 1f0k_A 131 ------------------AG--------LT---------------N---KW------LAKIATKVMQAFPGA-------- 152 (364)
T ss_dssp ------------------CC--------HH---------------H---HH------HTTTCSEEEESSTTS--------
T ss_pred ------------------Cc--------HH---------------H---HH------HHHhCCEEEecChhh--------
Confidence 00 00 0 00 012355666654332
Q ss_pred CCccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhC--CCCEEEEEcC
Q 012652 235 IPELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEIC--NRPFLWVVRP 312 (459)
Q Consensus 235 ~p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~ 312 (459)
.|++..+|......... + +. ..+.+...+++++|++..|+.. ..+....++++++.+ +.+++++++.
T Consensus 153 ~~~~~~i~n~v~~~~~~-------~-~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~ 221 (364)
T 1f0k_A 153 FPNAEVVGNPVRTDVLA-------L-PL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGK 221 (364)
T ss_dssp SSSCEECCCCCCHHHHT-------S-CC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCT
T ss_pred cCCceEeCCccchhhcc-------c-ch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 23455565433211100 0 11 1122222234567888888764 344555566676544 4555666665
Q ss_pred CCCCCCCCCCChhHHH---Hhc-CCceeecccch-hhhhcCCCccceeeccCchhHHHhhhcCCceeccccc---cccch
Q 012652 313 DITTDANDVYPRGFQE---RVA-TRGQMIGWAPQ-QRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF---VDQFL 384 (459)
Q Consensus 313 ~~~~~~~~~~~~~~~~---~~~-~nv~i~~~vpq-~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~---~DQ~~ 384 (459)
. . .+.+.+ +.. +||.+.+|+++ .+++..+|+ +|+++|.+++.||+++|+|+|+.|.. .||..
T Consensus 222 ~----~----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~ 291 (364)
T 1f0k_A 222 G----S----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYW 291 (364)
T ss_dssp T----C----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHH
T ss_pred c----h----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHH
Confidence 4 1 122322 222 58999999954 679999998 99999999999999999999999987 79999
Q ss_pred hhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHH
Q 012652 385 NESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLEW 456 (459)
Q Consensus 385 na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 456 (459)
|+..+.+ .|.|..++. .+++.++|.++|.++ |++.+++..+-+.... ...+..+..+.+.+.
T Consensus 292 ~~~~~~~-~g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 353 (364)
T 1f0k_A 292 NALPLEK-AGAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAAS----IPDATERVANEVSRV 353 (364)
T ss_dssp HHHHHHH-TTSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC----CTTHHHHHHHHHHHH
T ss_pred HHHHHHh-CCcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh----ccCHHHHHHHHHHHH
Confidence 9999998 599998864 556799999999999 7776665544443322 134444444444443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.69 E-value=2.9e-16 Score=143.38 Aligned_cols=115 Identities=9% Similarity=0.059 Sum_probs=89.2
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHh--cCCceeecccchh-hhhcCC
Q 012652 273 PKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERV--ATRGQMIGWAPQQ-RVLSHP 349 (459)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~nv~i~~~vpq~-~iL~~~ 349 (459)
+.+.|+|++|... .......+++++.... ++.++.+.. ....+.+.+.. ..|+.+..|+++. +++..+
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~a 226 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNES 226 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTE
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHC
Confidence 3568999999643 3346667888876544 577777654 12223333222 2489999999876 699999
Q ss_pred CccceeeccCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeee
Q 012652 350 SIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLD 400 (459)
Q Consensus 350 ~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~ 400 (459)
|+ +||+|| +|++|+++.|+|+|++|...+|..||..+++ .|+++.+.
T Consensus 227 Dl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~ 273 (282)
T 3hbm_A 227 NK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYK 273 (282)
T ss_dssp EE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECG
T ss_pred CE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcc
Confidence 99 999999 8999999999999999999999999999999 69999885
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=1.4e-15 Score=133.04 Aligned_cols=133 Identities=8% Similarity=0.006 Sum_probs=96.1
Q ss_pred cCCCCeEEEEEeCCcccCCHHHHHHH-----HHHHhhCC-CCEEEEEcCCCCCCCCCCCChhHHHHh---------c---
Q 012652 270 QQQPKSVIYVAFGSHTVLDHNQFQEL-----ALGLEICN-RPFLWVVRPDITTDANDVYPRGFQERV---------A--- 331 (459)
Q Consensus 270 ~~~~~~~v~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~--- 331 (459)
...+++.|||+.||... -.+.+..+ ++++...+ .++++.++.... ...+...+.. |
T Consensus 24 ~~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~~~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 24 GIIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----SEFEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----CCCCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----hhHHHHHHhhhcccccccccccc
Confidence 33457899999999732 34444444 48887777 788888886521 0111111111 1
Q ss_pred --------------C--Cceeecccchh-hhhc-CCCccceeeccCchhHHHhhhcCCceeccccc----cccchhhhhh
Q 012652 332 --------------T--RGQMIGWAPQQ-RVLS-HPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF----VDQFLNESYI 389 (459)
Q Consensus 332 --------------~--nv~i~~~vpq~-~iL~-~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~----~DQ~~na~rv 389 (459)
. ++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 2 34456888876 7999 9999 99999999999999999999999974 4699999999
Q ss_pred hceeeeeeeeecCCCCcccHHHHHHHHHHH
Q 012652 390 CDIWKVGLKLDKDESGIITGEEISNKLVQV 419 (459)
Q Consensus 390 ~~~~G~G~~~~~~~~~~~~~~~l~~~i~~l 419 (459)
++ .|+|+.+ +.+.|.++|.++
T Consensus 176 ~~-~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 176 VE-LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp HH-HSCCCEE--------CSCTTTHHHHHH
T ss_pred HH-CCCEEEc--------CHHHHHHHHHHH
Confidence 99 6998765 356677777776
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.55 E-value=9.8e-13 Score=127.43 Aligned_cols=339 Identities=15% Similarity=0.078 Sum_probs=185.0
Q ss_pred CCCCEEEEEcC--C--CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCC
Q 012652 1 MSSPHILVFST--P--AQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERT 76 (459)
Q Consensus 1 m~~~~il~~~~--~--~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 76 (459)
|++|||++++. + ..|.-.....|++.| +||+|++++............ ...++.+..++......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---- 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSVMLP---- 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSSCCS----
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccccccc----
Confidence 34899998874 3 458888899999999 799999999866544211110 11367777766422111
Q ss_pred ChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcc--hHHHHHHHcCCceEE-EeCcchhHHHHHhhcccccc
Q 012652 77 DPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMG--WSMEVAEKMKLRRAV-IWTSCAASVASIFCIPKLID 153 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~~~giP~i~-~~~~~~~~~~~~~~~~~~~~ 153 (459)
.. .....+.++++. .+||+|++....+ ....++..+|+|.++ ........
T Consensus 71 ~~---------~~~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------------ 123 (394)
T 3okp_A 71 TP---------TTAHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG------------ 123 (394)
T ss_dssp CH---------HHHHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH------------
T ss_pred ch---------hhHHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh------------
Confidence 00 111234455555 8999999765433 455668889998444 33321110
Q ss_pred cCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchhhhc
Q 012652 154 DGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPGAFN 233 (459)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~ 233 (459)
+.. ....+...+ .....+|.+++.|....+.-...
T Consensus 124 ---------------------------------~~~----------~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~~ 158 (394)
T 3okp_A 124 ---------------------------------WSM----------LPGSRQSLR--KIGTEVDVLTYISQYTLRRFKSA 158 (394)
T ss_dssp ---------------------------------HTT----------SHHHHHHHH--HHHHHCSEEEESCHHHHHHHHHH
T ss_pred ---------------------------------hhh----------cchhhHHHH--HHHHhCCEEEEcCHHHHHHHHHh
Confidence 000 000111111 11356788888887655443222
Q ss_pred cC--CccccccccccCCCCCCCCCCCCCCC----chHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhC-----
Q 012652 234 MI--PELLPVGPLLASNRLGNSAGHFWPED----STCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEIC----- 302 (459)
Q Consensus 234 ~~--p~v~~vGp~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~----- 302 (459)
+. .++..|........- .+.+ ..+.+.+.- +++..+++..|+.. ..+-+..+++++..+
T Consensus 159 ~~~~~~~~vi~ngv~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~ 228 (394)
T 3okp_A 159 FGSHPTFEHLPSGVDVKRF-------TPATPEDKSATRKKLGF-TDTTPVIACNSRLV--PRKGQDSLIKAMPQVIAARP 228 (394)
T ss_dssp HCSSSEEEECCCCBCTTTS-------CCCCHHHHHHHHHHTTC-CTTCCEEEEESCSC--GGGCHHHHHHHHHHHHHHST
T ss_pred cCCCCCeEEecCCcCHHHc-------CCCCchhhHHHHHhcCC-CcCceEEEEEeccc--cccCHHHHHHHHHHHHhhCC
Confidence 21 244444432222111 1111 111222221 22336677778763 222234444444322
Q ss_pred CCCEEEEEcCCCCCCCCCCCChhHH---HHhcCCceeecccchhh---hhcCCCccceee-----------ccCchhHHH
Q 012652 303 NRPFLWVVRPDITTDANDVYPRGFQ---ERVATRGQMIGWAPQQR---VLSHPSIACFLS-----------HCGWNSTME 365 (459)
Q Consensus 303 ~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~nv~i~~~vpq~~---iL~~~~~~~~I~-----------HgG~~s~~e 365 (459)
+.+++++ +.. ...+.+. ....++|.+.+++|+.+ ++..+++ +|. -|..+++.|
T Consensus 229 ~~~l~i~-G~g-------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~E 298 (394)
T 3okp_A 229 DAQLLIV-GSG-------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLE 298 (394)
T ss_dssp TCEEEEE-CCC-------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHH
T ss_pred CeEEEEE-cCc-------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHH
Confidence 3444444 332 1112222 22357899999998654 8999998 775 555678999
Q ss_pred hhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHhhhhcCC
Q 012652 366 GVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALEL-KEITMSSVREGG 444 (459)
Q Consensus 366 al~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l-~~~~~~~~~~~g 444 (459)
|+++|+|+|+.+. ......+.+ |.|..++ .-+.+++.++|.++++|++.+++..+- ++.+++ .-
T Consensus 299 a~a~G~PvI~~~~----~~~~e~i~~--~~g~~~~-----~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~----~~ 363 (394)
T 3okp_A 299 AQACGVPVIAGTS----GGAPETVTP--ATGLVVE-----GSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEA----EW 363 (394)
T ss_dssp HHHTTCCEEECSS----TTGGGGCCT--TTEEECC-----TTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HT
T ss_pred HHHcCCCEEEeCC----CChHHHHhc--CCceEeC-----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH----hC
Confidence 9999999999754 344445544 5777774 347999999999999998644433322 222222 23
Q ss_pred ChHHHHHHHHHHH
Q 012652 445 SSYKTFQNFLEWV 457 (459)
Q Consensus 445 ~~~~~~~~~~~~~ 457 (459)
+.....+++.+.+
T Consensus 364 s~~~~~~~~~~~~ 376 (394)
T 3okp_A 364 SWEIMGERLTNIL 376 (394)
T ss_dssp BHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 4455555555443
No 26
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.47 E-value=8.7e-13 Score=127.98 Aligned_cols=347 Identities=10% Similarity=0.054 Sum_probs=179.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcc----hHHHHhhhhccCCCCCCeEEEecCCCCCCCCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEYN----HKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEE 74 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 74 (459)
|+++||+++. ++.....-+..|.++|.++ |+++.++.+... ...++.. ++.. .+ .+.....
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~---------~i~~-~~--~l~v~~~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIF---------DIKP-DI--DLDIMKK 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHT---------TCCC-SE--ECCCCC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhc---------CCCC-Cc--ccccCCC
Confidence 5566888877 6666677779999999987 688876665432 1112211 3310 00 1111111
Q ss_pred CCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeC-CC--cchHHHHHHHcCCceEEEeCcchhHHHHHhhcccc
Q 012652 75 RTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISD-GF--MGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKL 151 (459)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D-~~--~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~ 151 (459)
....... .. ..-..+.++++. .+||+|++- .. .+++..+|.++|||++.+.... .
T Consensus 92 ~~~~~~~---~~-~~~~~l~~~l~~------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl-r----------- 149 (403)
T 3ot5_A 92 GQTLAEI---TS-RVMNGINEVIAA------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL-R----------- 149 (403)
T ss_dssp CCCHHHH---HH-HHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-C-----------
T ss_pred CCCHHHH---HH-HHHHHHHHHHHH------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-c-----------
Confidence 2223221 11 122345566666 899999862 22 2345678999999987533210 0
Q ss_pred cccCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchhh
Q 012652 152 IDDGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPGA 231 (459)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 231 (459)
.. .+. .+.. ....+.... ..++.+++.+....+.-.
T Consensus 150 -------------------------s~-------~~~-~~~p------~~~~r~~~~-----~~a~~~~~~se~~~~~l~ 185 (403)
T 3ot5_A 150 -------------------------TW-------NKY-SPFP------EEMNRQLTG-----VMADIHFSPTKQAKENLL 185 (403)
T ss_dssp -------------------------CS-------CTT-SSTT------HHHHHHHHH-----HHCSEEEESSHHHHHHHH
T ss_pred -------------------------cc-------ccc-cCCc------HHHHHHHHH-----HhcCEEECCCHHHHHHHH
Confidence 00 000 0000 101111100 124566666654333221
Q ss_pred hccC--CccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhC-----CC
Q 012652 232 FNMI--PELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEIC-----NR 304 (459)
Q Consensus 232 ~~~~--p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~ 304 (459)
.... .+++.||....+..... .. .....+..+.+ +++++++++.|....... .+..+++++..+ +.
T Consensus 186 ~~Gi~~~~i~vvGn~~~D~~~~~--~~-~~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~ 258 (403)
T 3ot5_A 186 AEGKDPATIFVTGNTAIDALKTT--VQ-KDYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDT 258 (403)
T ss_dssp HTTCCGGGEEECCCHHHHHHHHH--SC-TTCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTE
T ss_pred HcCCCcccEEEeCCchHHHHHhh--hh-hhcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCc
Confidence 1111 25777874332211000 00 00111222223 345677777664221111 245555555332 34
Q ss_pred CEEEEEcCCCCCCCCCCCChhHHHH--hcCCceeecccch---hhhhcCCCccceeeccCchhHHHhhhcCCceeccccc
Q 012652 305 PFLWVVRPDITTDANDVYPRGFQER--VATRGQMIGWAPQ---QRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYF 379 (459)
Q Consensus 305 ~~i~~~~~~~~~~~~~~~~~~~~~~--~~~nv~i~~~vpq---~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~ 379 (459)
++++..+.+ ..+.+.+.+. ..+++.+.+++++ ..++..+++ +|+-+|..+ .||.++|+|+|++|-.
T Consensus 259 ~~v~~~~~~------~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~ 329 (403)
T 3ot5_A 259 ELVYPMHLN------PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDT 329 (403)
T ss_dssp EEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSS
T ss_pred eEEEecCCC------HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCC
Confidence 555554332 0011112211 2368889998874 468999888 998875333 6999999999999766
Q ss_pred cccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012652 380 VDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLEWV 457 (459)
Q Consensus 380 ~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (459)
.+++.. + + .|.|+.+. . ++++|.+++.+++.|++.+++.++ ..+ ...+++++.+.++.+.+.+
T Consensus 330 ~~~~e~---v-~-~g~~~lv~-----~-d~~~l~~ai~~ll~~~~~~~~m~~---~~~-~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 330 TERPEG---I-E-AGTLKLIG-----T-NKENLIKEALDLLDNKESHDKMAQ---AAN-PYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp CSCHHH---H-H-HTSEEECC-----S-CHHHHHHHHHHHHHCHHHHHHHHH---SCC-TTCCSCHHHHHHHHHHHHH
T ss_pred Ccchhh---e-e-CCcEEEcC-----C-CHHHHHHHHHHHHcCHHHHHHHHh---hcC-cccCCcHHHHHHHHHHHHh
Confidence 665542 3 4 38887763 2 799999999999999876655433 222 2345666666666655544
No 27
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.45 E-value=1e-12 Score=127.34 Aligned_cols=138 Identities=14% Similarity=0.097 Sum_probs=87.1
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhC-----CCCEEEEEcCCCCCCCCCCCChhHHHH--hcCCceeecccch---
Q 012652 273 PKSVIYVAFGSHTVLDHNQFQELALGLEIC-----NRPFLWVVRPDITTDANDVYPRGFQER--VATRGQMIGWAPQ--- 342 (459)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~nv~i~~~vpq--- 342 (459)
++++|+++.+....... .+..+++++..+ +.++++..+.+ ..+.+.+.+. ..+++.+.+++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~ 301 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPF 301 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHH
Confidence 46677777633222222 245666666443 34555544322 0011122221 2357888877754
Q ss_pred hhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCC
Q 012652 343 QRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGD 422 (459)
Q Consensus 343 ~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 422 (459)
..++..+++ +|+-+| |.+.||.++|+|+|+..-..+++. +.+ .|.++.+. . ++++|.+++.++++|
T Consensus 302 ~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~-~G~~~lv~-----~-d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 302 VYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVA-AGTVKLVG-----T-NQQQICDALSLLLTD 367 (396)
T ss_dssp HHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHH-HTSEEECT-----T-CHHHHHHHHHHHHHC
T ss_pred HHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHH-cCceEEcC-----C-CHHHHHHHHHHHHcC
Confidence 468999998 999988 666799999999999755555432 334 38776553 2 699999999999999
Q ss_pred HHHHHHHHH
Q 012652 423 QNFKARALE 431 (459)
Q Consensus 423 ~~~~~~a~~ 431 (459)
++.+++..+
T Consensus 368 ~~~~~~m~~ 376 (396)
T 3dzc_A 368 PQAYQAMSQ 376 (396)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 876654443
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.44 E-value=1.3e-12 Score=126.01 Aligned_cols=136 Identities=11% Similarity=0.109 Sum_probs=87.2
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhC-----CCCEEEEEcCCCCCCCCCCCChhHHHHh--cCCceeecccch---h
Q 012652 274 KSVIYVAFGSHTVLDHNQFQELALGLEIC-----NRPFLWVVRPDITTDANDVYPRGFQERV--ATRGQMIGWAPQ---Q 343 (459)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~nv~i~~~vpq---~ 343 (459)
+++|+++.|...... .+..++++++.+ +.++++..+.+ ..+.+.+.+.. .++|.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN------PVVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC------HHHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457777777553221 345566665432 34444443432 00112222221 357888866555 4
Q ss_pred hhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCH
Q 012652 344 RVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQ 423 (459)
Q Consensus 344 ~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~ 423 (459)
+++..+|+ ||+.+| |.+.||+++|+|+|+.+..+++... .+ .|.|+.++ .+.++|.++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~-~g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LK-AGILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HH-HTSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hc-CCceEECC------CCHHHHHHHHHHHHhCh
Confidence 79999998 999884 4466999999999998766666552 34 38887763 28999999999999998
Q ss_pred HHHHHHHH
Q 012652 424 NFKARALE 431 (459)
Q Consensus 424 ~~~~~a~~ 431 (459)
+.+++..+
T Consensus 336 ~~~~~~~~ 343 (376)
T 1v4v_A 336 EELSRMRK 343 (376)
T ss_dssp HHHHHHHH
T ss_pred Hhhhhhcc
Confidence 76555443
No 29
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.44 E-value=5.4e-11 Score=116.99 Aligned_cols=338 Identities=14% Similarity=0.082 Sum_probs=172.9
Q ss_pred CCEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCC
Q 012652 3 SPHILVFST-----------PAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEP 71 (459)
Q Consensus 3 ~~~il~~~~-----------~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~ 71 (459)
+|||+|++. ...|+-.....|++.|.++||+|++++.......-... ....++++..++.....
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RVAENLRVINIAAGPYE 94 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EEETTEEEEEECCSCSS
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cccCCeEEEEecCCCcc
Confidence 689999984 23588889999999999999999999975432111000 00136777766532111
Q ss_pred CCCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcc--hHHHHHHHcCCceEEEeCcchhHHHHHhhcc
Q 012652 72 WEERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMG--WSMEVAEKMKLRRAVIWTSCAASVASIFCIP 149 (459)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~ 149 (459)
..........+..+. ...++..++. . .+||+|++..... .+..+++.+|+|++...+.......
T Consensus 95 ~~~~~~~~~~~~~~~---~~~~~~~~~~---~--~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~------ 160 (438)
T 3c48_A 95 GLSKEELPTQLAAFT---GGMLSFTRRE---K--VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN------ 160 (438)
T ss_dssp SCCGGGGGGGHHHHH---HHHHHHHHHH---T--CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS------
T ss_pred ccchhHHHHHHHHHH---HHHHHHHHhc---c--CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc------
Confidence 111111111111111 1111221332 1 2599998875322 3445677889999876655432100
Q ss_pred cccccCCCCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCch
Q 012652 150 KLIDDGIIDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEP 229 (459)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 229 (459)
..+...... . ........ ......+|.+++.+....+.
T Consensus 161 --------------------------~~~~~~~~~-~-------------~~~~~~~~--~~~~~~~d~ii~~s~~~~~~ 198 (438)
T 3c48_A 161 --------------------------SYRDDSDTP-E-------------SEARRICE--QQLVDNADVLAVNTQEEMQD 198 (438)
T ss_dssp --------------------------CC----CCH-H-------------HHHHHHHH--HHHHHHCSEEEESSHHHHHH
T ss_pred --------------------------ccccccCCc-c-------------hHHHHHHH--HHHHhcCCEEEEcCHHHHHH
Confidence 000000000 0 00000000 11235688888888765543
Q ss_pred hhhcc--C-CccccccccccCCCCCCCCCCCCCCC-c---hHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhC
Q 012652 230 GAFNM--I-PELLPVGPLLASNRLGNSAGHFWPED-S---TCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEIC 302 (459)
Q Consensus 230 ~~~~~--~-p~v~~vGp~~~~~~~~~~~~~~~~~~-~---~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~ 302 (459)
-...+ . .++..|........- .+.+ . .+.+-+.-.+ ...+++..|+... .+-+..+++++..+
T Consensus 199 ~~~~~g~~~~k~~vi~ngvd~~~~-------~~~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l 268 (438)
T 3c48_A 199 LMHHYDADPDRISVVSPGADVELY-------SPGNDRATERSRRELGIPL-HTKVVAFVGRLQP--FKGPQVLIKAVAAL 268 (438)
T ss_dssp HHHHHCCCGGGEEECCCCCCTTTS-------CCC----CHHHHHHTTCCS-SSEEEEEESCBSG--GGCHHHHHHHHHHH
T ss_pred HHHHhCCChhheEEecCCcccccc-------CCcccchhhhhHHhcCCCC-CCcEEEEEeeecc--cCCHHHHHHHHHHH
Confidence 31112 1 234444432221110 0111 1 1222222222 3356777787642 22233344444222
Q ss_pred -------CCCEEEEEcCCCCCCCCCCCChhHHHH-----hcCCceeecccchh---hhhcCCCccceeec----cCchhH
Q 012652 303 -------NRPFLWVVRPDITTDANDVYPRGFQER-----VATRGQMIGWAPQQ---RVLSHPSIACFLSH----CGWNST 363 (459)
Q Consensus 303 -------~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~nv~i~~~vpq~---~iL~~~~~~~~I~H----gG~~s~ 363 (459)
+.++++ ++... ......+.+.+. ..++|.+.+++|+. +++..+|+ +|.- |..+++
T Consensus 269 ~~~~p~~~~~l~i-~G~~~---~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~ 342 (438)
T 3c48_A 269 FDRDPDRNLRVII-CGGPS---GPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVA 342 (438)
T ss_dssp HHHCTTCSEEEEE-ECCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHH
T ss_pred HhhCCCcceEEEE-EeCCC---CCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHH
Confidence 223333 33310 001112222222 24789999999864 58999998 6654 335689
Q ss_pred HHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHH
Q 012652 364 MEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKA 427 (459)
Q Consensus 364 ~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~ 427 (459)
.||+++|+|+|+.+ .......+.+ -+.|..++ .-+.+++.++|.++++|++.++
T Consensus 343 ~Eama~G~PvI~~~----~~~~~e~i~~-~~~g~~~~-----~~d~~~la~~i~~l~~~~~~~~ 396 (438)
T 3c48_A 343 MEAQASGTPVIAAR----VGGLPIAVAE-GETGLLVD-----GHSPHAWADALATLLDDDETRI 396 (438)
T ss_dssp HHHHHTTCCEEEES----CTTHHHHSCB-TTTEEEES-----SCCHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHcCCCEEecC----CCChhHHhhC-CCcEEECC-----CCCHHHHHHHHHHHHcCHHHHH
Confidence 99999999999974 3445555655 36788774 3478999999999999886443
No 30
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.42 E-value=2.8e-12 Score=123.93 Aligned_cols=136 Identities=15% Similarity=0.112 Sum_probs=86.9
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhC-----CCCEEEEEcCCCCCCCCCCCChhHHHHh--cCCceeecccch---
Q 012652 273 PKSVIYVAFGSHTVLDHNQFQELALGLEIC-----NRPFLWVVRPDITTDANDVYPRGFQERV--ATRGQMIGWAPQ--- 342 (459)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~nv~i~~~vpq--- 342 (459)
++++++++.|+.....+ -+..+++++..+ +.++++..+.+ ..+.+.+.+.. .++|.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 35678888887643322 344455555332 33444433321 00112222222 268888777765
Q ss_pred hhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCC
Q 012652 343 QRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGD 422 (459)
Q Consensus 343 ~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 422 (459)
.+++..+|+ ||+.+|. .+.||+++|+|+|+.+..++.. .+.+ .|.|+.++ . +.++|.++|.++++|
T Consensus 277 ~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~-~g~g~lv~----~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVT-AGTVRLVG----T--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHH-HTSEEEEC----S--SHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhh-CCceEEeC----C--CHHHHHHHHHHHHhC
Confidence 468999998 9998854 4889999999999998744332 2344 38888884 3 899999999999999
Q ss_pred HHHHHHH
Q 012652 423 QNFKARA 429 (459)
Q Consensus 423 ~~~~~~a 429 (459)
++.+++.
T Consensus 343 ~~~~~~~ 349 (384)
T 1vgv_A 343 ENEYQAM 349 (384)
T ss_dssp HHHHHHH
T ss_pred hHHHhhh
Confidence 8655443
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.37 E-value=3e-10 Score=111.49 Aligned_cols=111 Identities=9% Similarity=-0.022 Sum_probs=71.6
Q ss_pred hcCCceeecccchhh---hhcCCCccceeec----cCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecC
Q 012652 330 VATRGQMIGWAPQQR---VLSHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKD 402 (459)
Q Consensus 330 ~~~nv~i~~~vpq~~---iL~~~~~~~~I~H----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 402 (459)
.++++.+.+|+|+.+ ++..+|+ +|.- |-.+++.||+++|+|+|+.. .......+.+ |.|..++
T Consensus 309 ~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~~~--~~g~~~~-- 378 (439)
T 3fro_A 309 HGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDIITN--ETGILVK-- 378 (439)
T ss_dssp CTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHCCT--TTCEEEC--
T ss_pred cCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeEEc--CceEEeC--
Confidence 344455668899864 7899998 6633 33478999999999999974 3445555543 7888774
Q ss_pred CCCcccHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012652 403 ESGIITGEEISNKLVQVLG-DQNFKARALELKEITMSSVREGGSSYKTFQNFLEWV 457 (459)
Q Consensus 403 ~~~~~~~~~l~~~i~~ll~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (459)
.-+.+++.++|.++++ |++.+++.. +..++.+ ..-+-....+++++.+
T Consensus 379 ---~~d~~~la~~i~~ll~~~~~~~~~~~---~~~~~~~-~~~s~~~~~~~~~~~~ 427 (439)
T 3fro_A 379 ---AGDPGELANAILKALELSRSDLSKFR---ENCKKRA-MSFSWEKSAERYVKAY 427 (439)
T ss_dssp ---TTCHHHHHHHHHHHHHHTTTTTHHHH---HHHHHHH-HTSCHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHhcCHHHHHHHH---HHHHHHH-hhCcHHHHHHHHHHHH
Confidence 3479999999999998 664333322 2222222 1244455555555443
No 32
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.37 E-value=4.3e-11 Score=115.10 Aligned_cols=161 Identities=13% Similarity=0.098 Sum_probs=93.7
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhC---CCCEEEEEcCCCCCCCCCCCChhHHHHhc--CCceeecccchh---h
Q 012652 273 PKSVIYVAFGSHTVLDHNQFQELALGLEIC---NRPFLWVVRPDITTDANDVYPRGFQERVA--TRGQMIGWAPQQ---R 344 (459)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~nv~i~~~vpq~---~ 344 (459)
++++++++.|...... +-+..+++++..+ ...+.++++.. ....+.+...+... ++|.+.+++++. +
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 278 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVH----MNPVVRETANDILGDYGRIHLIEPLDVIDFHN 278 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECC----SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCC----CCHHHHHHHHHHhhccCCEEEeCCCCHHHHHH
Confidence 3567777888654222 3345566666432 11232333322 10011112222223 688887777654 6
Q ss_pred hhcCCCccceeeccCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHH
Q 012652 345 VLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQN 424 (459)
Q Consensus 345 iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 424 (459)
++..+++ ||+.+| +.+.||+++|+|+|+....+... . +.+ .|.|..++ . +.++|.++|.++++|++
T Consensus 279 ~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e-~v~-~g~g~~v~-----~-d~~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 279 VAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---E-GIE-AGTLKLAG-----T-DEETIFSLADELLSDKE 344 (375)
T ss_dssp HHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---H-HHH-TTSEEECC-----S-CHHHHHHHHHHHHHCHH
T ss_pred HHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---e-eec-CCceEEcC-----C-CHHHHHHHHHHHHhChH
Confidence 8999998 898874 45889999999999985433322 2 334 38887773 2 89999999999999987
Q ss_pred HHHHHHHHHHHHHhhhhcCCChHHHHHHHHHH
Q 012652 425 FKARALELKEITMSSVREGGSSYKTFQNFLEW 456 (459)
Q Consensus 425 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 456 (459)
.+++.. +..++.. ...+..+.++.+.+.
T Consensus 345 ~~~~~~---~~~~~~~-~~~~~~~i~~~~~~~ 372 (375)
T 3beo_A 345 AHDKMS---KASNPYG-DGRASERIVEAILKH 372 (375)
T ss_dssp HHHHHC---CCCCTTC-CSCHHHHHHHHHHHH
T ss_pred hHhhhh---hcCCCCC-CCcHHHHHHHHHHHH
Confidence 555433 2333221 234444444444443
No 33
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.36 E-value=1e-11 Score=118.02 Aligned_cols=125 Identities=14% Similarity=0.120 Sum_probs=83.5
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchh---hhhcCCCccc
Q 012652 277 IYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQ---RVLSHPSIAC 353 (459)
Q Consensus 277 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~---~iL~~~~~~~ 353 (459)
+++..|+.. +.+-+..++++++.++.+++++-.+. ....+ ..+.+...++|.+.+|+++. +++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~----~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv-- 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW----EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA-- 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC----CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc----cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--
Confidence 445567654 34456777778877777766654322 00001 11223345899999999976 69999998
Q ss_pred eee--c-----------cC-chhHHHhhhcCCceeccccccccchhhhhhhc--eeeeeeeeecCCCCcccHHHHHHHHH
Q 012652 354 FLS--H-----------CG-WNSTMEGVSNGIPFLCWPYFVDQFLNESYICD--IWKVGLKLDKDESGIITGEEISNKLV 417 (459)
Q Consensus 354 ~I~--H-----------gG-~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~--~~G~G~~~~~~~~~~~~~~~l~~~i~ 417 (459)
+|. . -| .+++.||+++|+|+|+... ......+++ . +.|..+ .. +.+++.++|.
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~~i~ 303 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGT-----DF-APDEARRTLA 303 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSS-----CC-CHHHHHHHHH
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEc-----CC-CHHHHHHHHH
Confidence 663 2 33 4689999999999999854 345555544 3 567666 34 8999999999
Q ss_pred HHhC
Q 012652 418 QVLG 421 (459)
Q Consensus 418 ~ll~ 421 (459)
++++
T Consensus 304 ~l~~ 307 (342)
T 2iuy_A 304 GLPA 307 (342)
T ss_dssp TSCC
T ss_pred HHHH
Confidence 9997
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.35 E-value=3.3e-10 Score=113.43 Aligned_cols=86 Identities=16% Similarity=0.113 Sum_probs=64.3
Q ss_pred cCCceeecccchh---hhhcCC----Cccceeec----cCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeee
Q 012652 331 ATRGQMIGWAPQQ---RVLSHP----SIACFLSH----CGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKL 399 (459)
Q Consensus 331 ~~nv~i~~~vpq~---~iL~~~----~~~~~I~H----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~ 399 (459)
.++|.+.+++|+. +++..+ |+ +|.- |-..++.||+++|+|+|+.. .......+.+ -+.|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~-~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDG-GKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGG-GTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcC-CceEEEe
Confidence 4789999999865 488888 88 6643 33468899999999999984 3445555555 2478877
Q ss_pred ecCCCCcccHHHHHHHHHHHhCCHHHHHH
Q 012652 400 DKDESGIITGEEISNKLVQVLGDQNFKAR 428 (459)
Q Consensus 400 ~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 428 (459)
+ .-+.+++.++|.++++|++.+++
T Consensus 407 ~-----~~d~~~la~~i~~ll~~~~~~~~ 430 (499)
T 2r60_A 407 D-----PEDPEDIARGLLKAFESEETWSA 430 (499)
T ss_dssp C-----TTCHHHHHHHHHHHHSCHHHHHH
T ss_pred C-----CCCHHHHHHHHHHHHhCHHHHHH
Confidence 4 34789999999999999865443
No 35
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.33 E-value=4.7e-11 Score=116.04 Aligned_cols=86 Identities=12% Similarity=0.180 Sum_probs=65.7
Q ss_pred cCCceeecccchh---hhhcCCCccceeec----cC-chhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecC
Q 012652 331 ATRGQMIGWAPQQ---RVLSHPSIACFLSH----CG-WNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKD 402 (459)
Q Consensus 331 ~~nv~i~~~vpq~---~iL~~~~~~~~I~H----gG-~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 402 (459)
.++|.+.+++++. +++..+++ +|.- .| .+++.||+++|+|+|+.+. ......+.+ -+.|..++
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~~-- 332 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLAD-GDAGRLVP-- 332 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTT-TTSSEECC--
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcC-CCceEEeC--
Confidence 5789999999975 69999998 6643 34 3589999999999999854 455566665 36777774
Q ss_pred CCCcccHHHHHHHHHHHhCCHHHHHH
Q 012652 403 ESGIITGEEISNKLVQVLGDQNFKAR 428 (459)
Q Consensus 403 ~~~~~~~~~l~~~i~~ll~~~~~~~~ 428 (459)
.-+.+++.++|.++++|++.+++
T Consensus 333 ---~~d~~~l~~~i~~l~~~~~~~~~ 355 (406)
T 2gek_A 333 ---VDDADGMAAALIGILEDDQLRAG 355 (406)
T ss_dssp ---TTCHHHHHHHHHHHHHCHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHcCHHHHHH
Confidence 34789999999999998865443
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.30 E-value=5.5e-09 Score=101.07 Aligned_cols=320 Identities=12% Similarity=0.103 Sum_probs=165.7
Q ss_pred CCEEEEEcCCC-ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHH
Q 012652 3 SPHILVFSTPA-QGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKL 81 (459)
Q Consensus 3 ~~~il~~~~~~-~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 81 (459)
+.++....+|. .|.-.-...|+++|+++||+|++++....... .. ...++.+..++....... ......
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~~-------~~~~i~~~~~~~~~~~~~-~~~~~~- 84 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-NK-------VYPNIYFHEVTVNQYSVF-QYPPYD- 84 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC----C-CSCCHH-
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-cc-------cCCceEEEeccccccccc-cccccc-
Confidence 34666666664 47778888999999999999999997543211 11 113666665542110000 000010
Q ss_pred HHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcc--hHHHHHHH-c--CCceEEEeCcchhHHHHHhhcccccccCC
Q 012652 82 IEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMG--WSMEVAEK-M--KLRRAVIWTSCAASVASIFCIPKLIDDGI 156 (459)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~~-~--giP~i~~~~~~~~~~~~~~~~~~~~~~~~ 156 (459)
.. ....+.++++. .+||+|++..... ....++.. + ++|++......... .
T Consensus 85 ~~-----~~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-----~--------- 139 (394)
T 2jjm_A 85 LA-----LASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT-----V--------- 139 (394)
T ss_dssp HH-----HHHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----T---------
T ss_pred HH-----HHHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-----c---------
Confidence 00 11234445555 7899999874433 22333443 3 59988755442210 0
Q ss_pred CCCCCCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchhhhccC-
Q 012652 157 IDSNGTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPGAFNMI- 235 (459)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~- 235 (459)
.+... .. ....+. ....+|.+++.+....+.-...+.
T Consensus 140 ----------------~~~~~-----~~---------------~~~~~~------~~~~ad~ii~~s~~~~~~~~~~~~~ 177 (394)
T 2jjm_A 140 ----------------LGSDP-----SL---------------NNLIRF------GIEQSDVVTAVSHSLINETHELVKP 177 (394)
T ss_dssp ----------------TTTCT-----TT---------------HHHHHH------HHHHSSEEEESCHHHHHHHHHHTCC
T ss_pred ----------------cCCCH-----HH---------------HHHHHH------HHhhCCEEEECCHHHHHHHHHhhCC
Confidence 00000 00 111111 134577888887665443211111
Q ss_pred -CccccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhh----CCCCEEEEE
Q 012652 236 -PELLPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEI----CNRPFLWVV 310 (459)
Q Consensus 236 -p~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~----~~~~~i~~~ 310 (459)
.++..+........-. ......+.+-+.-. ++..+++..|+... .+-+..++++++. .+.++++ +
T Consensus 178 ~~~~~vi~ngv~~~~~~------~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i-~ 247 (394)
T 2jjm_A 178 NKDIQTVYNFIDERVYF------KRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLLL-V 247 (394)
T ss_dssp SSCEEECCCCCCTTTCC------CCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEEE-E
T ss_pred cccEEEecCCccHHhcC------CcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEEE-E
Confidence 2444444322211110 01112222222211 23356666787642 2233444444432 2344443 3
Q ss_pred cCCCCCCCCCCCChhHHHH-----hcCCceeecccch-hhhhcCCCcccee----eccCchhHHHhhhcCCceecccccc
Q 012652 311 RPDITTDANDVYPRGFQER-----VATRGQMIGWAPQ-QRVLSHPSIACFL----SHCGWNSTMEGVSNGIPFLCWPYFV 380 (459)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~-----~~~nv~i~~~vpq-~~iL~~~~~~~~I----~HgG~~s~~eal~~gvP~v~~P~~~ 380 (459)
+.. ...+.+.+. ..++|.+.++..+ .+++..+|+ +| .-|..+++.||+++|+|+|+.+.
T Consensus 248 G~g-------~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~-- 316 (394)
T 2jjm_A 248 GDG-------PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRV-- 316 (394)
T ss_dssp CCC-------TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECC--
T ss_pred CCc-------hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecC--
Confidence 432 111222222 1467888887554 469999998 77 45566899999999999999854
Q ss_pred ccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHH
Q 012652 381 DQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKAR 428 (459)
Q Consensus 381 DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 428 (459)
......+.+ -+.|..++ .-+.+++.++|.++++|++.+++
T Consensus 317 --~~~~e~v~~-~~~g~~~~-----~~d~~~la~~i~~l~~~~~~~~~ 356 (394)
T 2jjm_A 317 --GGIPEVIQH-GDTGYLCE-----VGDTTGVADQAIQLLKDEELHRN 356 (394)
T ss_dssp --TTSTTTCCB-TTTEEEEC-----TTCHHHHHHHHHHHHHCHHHHHH
T ss_pred --CChHHHhhc-CCceEEeC-----CCCHHHHHHHHHHHHcCHHHHHH
Confidence 334445554 25787774 34789999999999998865443
No 37
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.28 E-value=1e-09 Score=107.02 Aligned_cols=84 Identities=11% Similarity=0.031 Sum_probs=63.5
Q ss_pred cCCceeecccc---h---hhhhcCCCccceeecc----CchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeee
Q 012652 331 ATRGQMIGWAP---Q---QRVLSHPSIACFLSHC----GWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLD 400 (459)
Q Consensus 331 ~~nv~i~~~vp---q---~~iL~~~~~~~~I~Hg----G~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~ 400 (459)
.++|.+.+|++ + .+++..+|+ +|.-. ..+++.||+++|+|+|+.+. ..+...+.+ -+.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEE-
Confidence 46899988776 2 358889898 77544 45789999999999999754 445556655 3677766
Q ss_pred cCCCCcccHHHHHHHHHHHhCCHHHHHH
Q 012652 401 KDESGIITGEEISNKLVQVLGDQNFKAR 428 (459)
Q Consensus 401 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 428 (459)
. +.+++.++|.++++|++.+++
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~~ 385 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSKE 385 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHHH
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHHH
Confidence 3 789999999999999865444
No 38
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.22 E-value=7e-09 Score=99.41 Aligned_cols=160 Identities=16% Similarity=0.215 Sum_probs=99.3
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhCCC----C-EEEEEcCCCCCCCCCCCChhHHH---H--hcCCceeecccch-
Q 012652 274 KSVIYVAFGSHTVLDHNQFQELALGLEICNR----P-FLWVVRPDITTDANDVYPRGFQE---R--VATRGQMIGWAPQ- 342 (459)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~~~~~~~~~~~~~---~--~~~nv~i~~~vpq- 342 (459)
+..+++..|+.. ..+-+..+++++..+.. . -+++++.. . .+.+.+ . ..++|.+.++..+
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccH
Confidence 446777788764 23345666677765532 2 23334432 1 122222 2 2468888888654
Q ss_pred hhhhcCCCccceee----ccCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHH
Q 012652 343 QRVLSHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQ 418 (459)
Q Consensus 343 ~~iL~~~~~~~~I~----HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ 418 (459)
.+++..+++ +|. -|..+++.||+++|+|+|+... ..+...+++ -+.|..+. ..-+.+++.++|.+
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~-~~~g~~~~----~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIAD-ANCGTVIA----EPFSQEQLNEVLRK 333 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHH-HTCEEEEC----SSCCHHHHHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhcc-CCceEEeC----CCCCHHHHHHHHHH
Confidence 469999998 775 4567889999999999999754 455666776 47888884 24579999999999
Q ss_pred HhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHH
Q 012652 419 VLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLE 455 (459)
Q Consensus 419 ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (459)
+++|++.+++..+-+....+.. .-.+..+.+.++++
T Consensus 334 l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 334 ALTQSPLRMAWAENARHYADTQ-DLYSLPEKAADIIT 369 (374)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHS-CCSCHHHHHHHHHH
T ss_pred HHcChHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Confidence 9999865544433322222210 11344455555554
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.11 E-value=7.7e-10 Score=106.29 Aligned_cols=317 Identities=14% Similarity=0.085 Sum_probs=165.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH-HHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHK-RVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLI 82 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (459)
.|++++ .+++-.+.-+..|.++|.++ ++..++.+....+ .+.+... .++.+....-.+.. ...++.+..
T Consensus 10 ~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i~~~~~~l~~--~~~~~~~~~ 79 (385)
T 4hwg_A 10 LKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGIRKPDYFLEV--AADNTAKSI 79 (385)
T ss_dssp CEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCCCCCSEECCC--CCCCSHHHH
T ss_pred hheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCCCCCceecCC--CCCCHHHHH
Confidence 455554 47888889999999999877 8988887765433 2222110 12222100001111 122332222
Q ss_pred HHHHHhccHHHHHHHHHHhCCCCCCccEEEe--CCCcchHHHHHHHcCCceEEEeCcchhHHHHHhhcccccccCCCCCC
Q 012652 83 EKVLQVMPGKLEELIEEINGRDDEKIDCFIS--DGFMGWSMEVAEKMKLRRAVIWTSCAASVASIFCIPKLIDDGIIDSN 160 (459)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~--D~~~~~~~~~A~~~giP~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (459)
.. +-..+.++++. .+||+|+. |....++..+|.++|||++.+... .
T Consensus 80 ~~----~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag-l--------------------- 127 (385)
T 4hwg_A 80 GL----VIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG-N--------------------- 127 (385)
T ss_dssp HH----HHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC-C---------------------
T ss_pred HH----HHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC-C---------------------
Confidence 22 23346666666 89999875 323334478899999997643221 1
Q ss_pred CCccccccccccCCCCCCCcccccccccCCcccccchhhhHHHHHHHHHHHhhccCCEEEEcCCccCchhhhccC--Ccc
Q 012652 161 GTPIRKQMIQLAPNMLEMNTEEFFWTRLGDITTQKMTSQKIIFDLSIRTIKAMKVADFQFCNSTYELEPGAFNMI--PEL 238 (459)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~--p~v 238 (459)
..... ..+ ....+.... .-++.+++.+...-+.-..... .++
T Consensus 128 ---------------rs~~~-~~p---------------ee~nR~~~~-----~~a~~~~~~te~~~~~l~~~G~~~~~I 171 (385)
T 4hwg_A 128 ---------------RCFDQ-RVP---------------EEINRKIID-----HISDVNITLTEHARRYLIAEGLPAELT 171 (385)
T ss_dssp ---------------CCSCT-TST---------------HHHHHHHHH-----HHCSEEEESSHHHHHHHHHTTCCGGGE
T ss_pred ---------------ccccc-cCc---------------HHHHHHHHH-----hhhceeecCCHHHHHHHHHcCCCcCcE
Confidence 00000 000 111111110 1245566655443222111111 256
Q ss_pred ccccccccCCCCCCCCCCCCCCCchHHHHhccCCCCeEEEEEeCCcccCC-HHHHHHHHHHHhhC----CCCEEEEEcCC
Q 012652 239 LPVGPLLASNRLGNSAGHFWPEDSTCLKWLDQQQPKSVIYVAFGSHTVLD-HNQFQELALGLEIC----NRPFLWVVRPD 313 (459)
Q Consensus 239 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i~~~~~~ 313 (459)
+.+|-...+...... . .....++.+.+.-. +++.|+++.|...... .+.+..+++++..+ +.++|+...+.
T Consensus 172 ~vtGnp~~D~~~~~~--~-~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~ 247 (385)
T 4hwg_A 172 FKSGSHMPEVLDRFM--P-KILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR 247 (385)
T ss_dssp EECCCSHHHHHHHHH--H-HHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH
T ss_pred EEECCchHHHHHHhh--h-hcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH
Confidence 777743221100000 0 00011222333322 2568888887653322 24566677776443 45666654321
Q ss_pred CCCCCCCCCChhHHHH---h--cCCceeecccch---hhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchh
Q 012652 314 ITTDANDVYPRGFQER---V--ATRGQMIGWAPQ---QRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLN 385 (459)
Q Consensus 314 ~~~~~~~~~~~~~~~~---~--~~nv~i~~~vpq---~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~n 385 (459)
+.+.+.+. . .+|+.+.+.+++ ..++..+++ +|+-.|. .+.||.+.|+|+|+++...+.+.
T Consensus 248 --------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e- 315 (385)
T 4hwg_A 248 --------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE- 315 (385)
T ss_dssp --------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH-
T ss_pred --------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh-
Confidence 11111111 1 356777665554 469999998 9999876 46899999999999987554222
Q ss_pred hhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHH
Q 012652 386 ESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQN 424 (459)
Q Consensus 386 a~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 424 (459)
.+ + .|.++.+. .+++.|.+++.++++|+.
T Consensus 316 --~v-~-~G~~~lv~------~d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 316 --GM-D-AGTLIMSG------FKAERVLQAVKTITEEHD 344 (385)
T ss_dssp --HH-H-HTCCEECC------SSHHHHHHHHHHHHTTCB
T ss_pred --hh-h-cCceEEcC------CCHHHHHHHHHHHHhChH
Confidence 23 4 38776663 279999999999998864
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.95 E-value=4.7e-07 Score=89.98 Aligned_cols=134 Identities=9% Similarity=0.033 Sum_probs=81.6
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHh---hCCCCEEEEEcCCCCCCCCCCCChhHH---HHhcCCce-eecccchh--hhh
Q 012652 276 VIYVAFGSHTVLDHNQFQELALGLE---ICNRPFLWVVRPDITTDANDVYPRGFQ---ERVATRGQ-MIGWAPQQ--RVL 346 (459)
Q Consensus 276 ~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~nv~-i~~~vpq~--~iL 346 (459)
.+++..|+... .+-+..+++++. +.+.+++++..+. ..+.+.+. +..++++. +.++.... +++
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 363 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQ 363 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCc------hHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHH
Confidence 47777888742 223344444443 2356666554321 00112222 22346787 56873332 589
Q ss_pred cCCCccceeec----cCchhHHHhhhcCCceeccccccccchhhhhhhcee---------eeeeeeecCCCCcccHHHHH
Q 012652 347 SHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIW---------KVGLKLDKDESGIITGEEIS 413 (459)
Q Consensus 347 ~~~~~~~~I~H----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~---------G~G~~~~~~~~~~~~~~~l~ 413 (459)
..+|+ +|.- |...++.||+++|+|+|+... ......+.+ - +.|..++ .-+.++|.
T Consensus 364 ~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~la 431 (485)
T 1rzu_A 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFS-----PVTLDGLK 431 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEES-----SCSHHHHH
T ss_pred hcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeC-----CCCHHHHH
Confidence 99998 6632 335689999999999999754 344444543 2 4777774 34789999
Q ss_pred HHHHHHh---CCHHHHHHH
Q 012652 414 NKLVQVL---GDQNFKARA 429 (459)
Q Consensus 414 ~~i~~ll---~~~~~~~~a 429 (459)
++|.+++ +|++.+++.
T Consensus 432 ~~i~~ll~~~~~~~~~~~~ 450 (485)
T 1rzu_A 432 QAIRRTVRYYHDPKLWTQM 450 (485)
T ss_dssp HHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHH
Confidence 9999999 787655443
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.90 E-value=1.6e-06 Score=86.10 Aligned_cols=135 Identities=11% Similarity=0.078 Sum_probs=81.4
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhh---CCCCEEEEEcCCCCCCCCCCCChhHH---HHhcCCce-eecccchh--hh
Q 012652 275 SVIYVAFGSHTVLDHNQFQELALGLEI---CNRPFLWVVRPDITTDANDVYPRGFQ---ERVATRGQ-MIGWAPQQ--RV 345 (459)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~nv~-i~~~vpq~--~i 345 (459)
..+++..|+.. ..+-+..++++++. .+.+++++..+. ....+.+. +...+++. +.++.+.. ++
T Consensus 292 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 363 (485)
T 2qzs_A 292 VPLFAVVSRLT--SQKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRI 363 (485)
T ss_dssp SCEEEEEEEES--GGGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHH
T ss_pred CeEEEEeccCc--cccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHH
Confidence 35666677653 22334444455433 356666554322 00112222 22346786 66884332 68
Q ss_pred hcCCCccceeec----cCchhHHHhhhcCCceeccccccccchhhhhhhcee---------eeeeeeecCCCCcccHHHH
Q 012652 346 LSHPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIW---------KVGLKLDKDESGIITGEEI 412 (459)
Q Consensus 346 L~~~~~~~~I~H----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~---------G~G~~~~~~~~~~~~~~~l 412 (459)
+..+|+ +|.- |...++.||+++|+|+|+... ......+.+ - +.|..++ .-+.++|
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~l 431 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFE-----DSNAWSL 431 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEEC-----SSSHHHH
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEEC-----CCCHHHH
Confidence 999998 6633 335688899999999999843 344444543 2 4777774 3478999
Q ss_pred HHHHHHHh---CCHHHHHHH
Q 012652 413 SNKLVQVL---GDQNFKARA 429 (459)
Q Consensus 413 ~~~i~~ll---~~~~~~~~a 429 (459)
.++|.+++ .|++.+++.
T Consensus 432 a~~i~~ll~~~~~~~~~~~~ 451 (485)
T 2qzs_A 432 LRAIRRAFVLWSRPSLWRFV 451 (485)
T ss_dssp HHHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHH
Confidence 99999999 787655444
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.88 E-value=2.6e-07 Score=96.24 Aligned_cols=87 Identities=14% Similarity=0.156 Sum_probs=59.4
Q ss_pred cCCceeec----ccchhhhhc----CCCccceeec----cCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeee
Q 012652 331 ATRGQMIG----WAPQQRVLS----HPSIACFLSH----CGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLK 398 (459)
Q Consensus 331 ~~nv~i~~----~vpq~~iL~----~~~~~~~I~H----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~ 398 (459)
.++|.+.+ ++|+.++.. .+++ ||.- |-..++.||+++|+|+|+. |.......+.+ -+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~d-g~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVH-GKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCB-TTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHcc-CCcEEE
Confidence 46788887 444455444 5667 6643 3346899999999999997 45555566655 357887
Q ss_pred eecCCCCcccHHHHHHHHHHHh----CCHHHHHHH
Q 012652 399 LDKDESGIITGEEISNKLVQVL----GDQNFKARA 429 (459)
Q Consensus 399 ~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~a 429 (459)
++ .-+.+++.++|.+++ .|++.+++.
T Consensus 712 v~-----p~D~e~LA~aI~~lL~~Ll~d~~~~~~m 741 (816)
T 3s28_A 712 ID-----PYHGDQAADTLADFFTKCKEDPSHWDEI 741 (816)
T ss_dssp EC-----TTSHHHHHHHHHHHHHHHHHCTHHHHHH
T ss_pred eC-----CCCHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 74 347889999997766 777654443
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.81 E-value=9.2e-06 Score=82.35 Aligned_cols=90 Identities=14% Similarity=0.058 Sum_probs=63.7
Q ss_pred CCceeecccchh---hhhcCCCccceee---ccCchhHHHhhhcCCceeccccccccchh-hhhhhceeeeeeeeecCCC
Q 012652 332 TRGQMIGWAPQQ---RVLSHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFVDQFLN-ESYICDIWKVGLKLDKDES 404 (459)
Q Consensus 332 ~nv~i~~~vpq~---~iL~~~~~~~~I~---HgG~~s~~eal~~gvP~v~~P~~~DQ~~n-a~rv~~~~G~G~~~~~~~~ 404 (459)
++|.+.+++|+. .++..+|+ ||. .|+.+++.||+++|+|+|++|-..=.... +..+.+ .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 678899999854 57899998 662 26667899999999999997643111111 233444 36665553
Q ss_pred CcccHHHHHHHHHHHhCCHHHHHHHH
Q 012652 405 GIITGEEISNKLVQVLGDQNFKARAL 430 (459)
Q Consensus 405 ~~~~~~~l~~~i~~ll~~~~~~~~a~ 430 (459)
. +.+++.+++.++++|++.+++.+
T Consensus 507 ~--~~~~la~~i~~l~~~~~~~~~~~ 530 (568)
T 2vsy_A 507 A--DDAAFVAKAVALASDPAALTALH 530 (568)
T ss_dssp S--SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhcCHHHHHHHH
Confidence 2 89999999999999987655443
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.69 E-value=1.5e-06 Score=84.43 Aligned_cols=161 Identities=9% Similarity=0.064 Sum_probs=88.6
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhh-----CCCCEEEEEcCCCCCCCCCCCChhHHH---H--hcCC-------cee
Q 012652 274 KSVIYVAFGSHTVLDHNQFQELALGLEI-----CNRPFLWVVRPDITTDANDVYPRGFQE---R--VATR-------GQM 336 (459)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~---~--~~~n-------v~i 336 (459)
+..+++..|+.. ..+-+..+++++.. .+.+++++..+... ....+.+.+.+ . +.++ +.+
T Consensus 183 ~~~~il~vGr~~--~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~--~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~ 258 (413)
T 3oy2_A 183 DDVLFLNMNRNT--ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHE--SKFDLHSIALRELVASGVDNVFTHLNKIMIN 258 (413)
T ss_dssp TSEEEECCSCSS--GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTT--CSCCHHHHHHHHHHHHTCSCHHHHHTTEEEE
T ss_pred CceEEEEcCCCc--hhcCcHHHHHHHHHHHHhCCCcEEEEEeCCccc--chhhHHHHHHHHHHHcCcccccccccceeec
Confidence 346777788753 22334444444433 24666666544310 00011122222 1 2333 556
Q ss_pred ecccchh---hhhcCCCccceee----ccCchhHHHhhhcCCceeccccccccchhhhhhhceeee--------------
Q 012652 337 IGWAPQQ---RVLSHPSIACFLS----HCGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKV-------------- 395 (459)
Q Consensus 337 ~~~vpq~---~iL~~~~~~~~I~----HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~-------------- 395 (459)
.+|+|+. +++..+++ +|. -|...++.||+++|+|+|+.... .....+.+ |.
T Consensus 259 ~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~--~~~~~i~~~~~~~~~~ 330 (413)
T 3oy2_A 259 RTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSG--DCVYKIKPSAWISVDD 330 (413)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCT--TTSEEECCCEEEECTT
T ss_pred cCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHcc--Cccccccccccccccc
Confidence 6999955 48899998 663 23346899999999999997542 23333322 22
Q ss_pred --ee--eeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHH
Q 012652 396 --GL--KLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITMSSVREGGSSYKTFQNFLE 455 (459)
Q Consensus 396 --G~--~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 455 (459)
|. .+. .-+.+++.++| ++++|++.+++.. +..++.+...-+-....+++.+
T Consensus 331 ~~G~~gl~~-----~~d~~~la~~i-~l~~~~~~~~~~~---~~a~~~~~~~fs~~~~~~~~~~ 385 (413)
T 3oy2_A 331 RDGIGGIEG-----IIDVDDLVEAF-TFFKDEKNRKEYG---KRVQDFVKTKPTWDDISSDIID 385 (413)
T ss_dssp TCSSCCEEE-----ECCHHHHHHHH-HHTTSHHHHHHHH---HHHHHHHTTSCCHHHHHHHHHH
T ss_pred ccCcceeeC-----CCCHHHHHHHH-HHhcCHHHHHHHH---HHHHHHHHHhCCHHHHHHHHHH
Confidence 44 553 23899999999 9999987554433 3333322223344444444443
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.60 E-value=2e-05 Score=76.22 Aligned_cols=76 Identities=9% Similarity=0.008 Sum_probs=58.2
Q ss_pred cCCceeecccchh---hhhcCCCccceee---ccC-chhHHHhh-------hcCCceeccccccccchhhhhhhceeeee
Q 012652 331 ATRGQMIGWAPQQ---RVLSHPSIACFLS---HCG-WNSTMEGV-------SNGIPFLCWPYFVDQFLNESYICDIWKVG 396 (459)
Q Consensus 331 ~~nv~i~~~vpq~---~iL~~~~~~~~I~---HgG-~~s~~eal-------~~gvP~v~~P~~~DQ~~na~rv~~~~G~G 396 (459)
.+||.+.+++|+. +++..+|+ +|. +.| .+++.||+ ++|+|+|+... +.+ -..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-Ccce
Confidence 4789999999875 48999998 553 233 46788999 99999999844 554 2567
Q ss_pred ee-eecCCCCcccHHHHHHHHHHHhCCHH
Q 012652 397 LK-LDKDESGIITGEEISNKLVQVLGDQN 424 (459)
Q Consensus 397 ~~-~~~~~~~~~~~~~l~~~i~~ll~~~~ 424 (459)
.. ++ .-+.++|.++|.++++|++
T Consensus 331 ~l~v~-----~~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYT-----PGNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEEC-----TTCHHHHHHHHHHHHHCCC
T ss_pred EEEeC-----CCCHHHHHHHHHHHHhCcc
Confidence 76 64 3478999999999998765
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.56 E-value=1.8e-07 Score=79.52 Aligned_cols=139 Identities=11% Similarity=0.053 Sum_probs=91.1
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCChhH---HHHhcCCceeecccch---hhhhcC
Q 012652 276 VIYVAFGSHTVLDHNQFQELALGLEIC-NRPFLWVVRPDITTDANDVYPRGF---QERVATRGQMIGWAPQ---QRVLSH 348 (459)
Q Consensus 276 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~nv~i~~~vpq---~~iL~~ 348 (459)
.+++..|+.. ..+-+..++++++.+ +.+++++..+. ....+.+-. ....++||.+.+|+++ ..++..
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 4555677764 334567778888776 45655554332 111111111 1124569999999998 469999
Q ss_pred CCccceee---ccC-chhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHH
Q 012652 349 PSIACFLS---HCG-WNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQN 424 (459)
Q Consensus 349 ~~~~~~I~---HgG-~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 424 (459)
+++ +|. +.| ..++.||+++|+|+|+.. ...+...+++ -+.|..+ . -+.+++.++|.++++|++
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~-~~~g~~~-~-----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVIN-EKTGYLV-N-----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCB-TTTEEEE-C-----SCHHHHHHHHHHHHHCTT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcC-CCccEEe-C-----CCHHHHHHHHHHHHhCHH
Confidence 998 665 334 458999999999999974 3455566655 3567766 2 268999999999998876
Q ss_pred H-HHHHHHHH
Q 012652 425 F-KARALELK 433 (459)
Q Consensus 425 ~-~~~a~~l~ 433 (459)
. ++++++.+
T Consensus 165 ~~~~~~~~~a 174 (177)
T 2f9f_A 165 KFKKDCFRRA 174 (177)
T ss_dssp TTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4 55555443
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.46 E-value=2.2e-05 Score=75.07 Aligned_cols=91 Identities=16% Similarity=0.221 Sum_probs=62.1
Q ss_pred Cceeecccch-hhhhcCCCccceeec-----cCchhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCc
Q 012652 333 RGQMIGWAPQ-QRVLSHPSIACFLSH-----CGWNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGI 406 (459)
Q Consensus 333 nv~i~~~vpq-~~iL~~~~~~~~I~H-----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 406 (459)
++.+.++..+ ..++..+|+ ++.- +|..++.||+++|+|+|+-|...+.......+.+ -|.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEeC------
Confidence 3455554443 468889887 5542 2347899999999999987766666665555444 37776552
Q ss_pred ccHHHHHHHHHHHhCCHH----HHHHHHHHHH
Q 012652 407 ITGEEISNKLVQVLGDQN----FKARALELKE 434 (459)
Q Consensus 407 ~~~~~l~~~i~~ll~~~~----~~~~a~~l~~ 434 (459)
+.++|.++|.++++| + +.+++++..+
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~ 361 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKG 361 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHH
Confidence 689999999999987 5 4445544443
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.91 E-value=0.00012 Score=60.75 Aligned_cols=132 Identities=11% Similarity=0.192 Sum_probs=80.1
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhCCC--CE-EEEEcCCCCCCCCCCCChhHH---HHhcCCceeecccchh---hh
Q 012652 275 SVIYVAFGSHTVLDHNQFQELALGLEICNR--PF-LWVVRPDITTDANDVYPRGFQ---ERVATRGQMIGWAPQQ---RV 345 (459)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~--~~-i~~~~~~~~~~~~~~~~~~~~---~~~~~nv~i~~~vpq~---~i 345 (459)
+++++..|+.. ..+-+..+++++..+.. .+ ++.++.. ...+.+. +....++.+ +|+|+. ++
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g-------~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKG-------PDEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCS-------TTHHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCC-------ccHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 47788888764 33456667777765531 23 2333322 1112222 223347778 999875 48
Q ss_pred hcCCCccceee----ccCchhHHHhhhcCC-ceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHh
Q 012652 346 LSHPSIACFLS----HCGWNSTMEGVSNGI-PFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVL 420 (459)
Q Consensus 346 L~~~~~~~~I~----HgG~~s~~eal~~gv-P~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll 420 (459)
+..+++ +|. -|...++.||+++|+ |+|+... .......+.+ -+. .+ ..-+.+++.++|.+++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~~~-~~~--~~-----~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFALD-ERS--LF-----EPNNAKDLSAKIDWWL 138 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGCSS-GGG--EE-----CTTCHHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhccC-Cce--EE-----cCCCHHHHHHHHHHHH
Confidence 999998 665 233568999999996 9999432 2222223333 122 33 3347999999999999
Q ss_pred CCHHHHHHH
Q 012652 421 GDQNFKARA 429 (459)
Q Consensus 421 ~~~~~~~~a 429 (459)
+|++.+++.
T Consensus 139 ~~~~~~~~~ 147 (166)
T 3qhp_A 139 ENKLERERM 147 (166)
T ss_dssp HCHHHHHHH
T ss_pred hCHHHHHHH
Confidence 998654443
No 49
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.90 E-value=0.0023 Score=60.20 Aligned_cols=103 Identities=12% Similarity=0.070 Sum_probs=70.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHhhhhccCCCCCCe-EEEecCCCCCCCCCCCChHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEYNHKRVMKSLEGKNYLGEQI-RLVSIPDGMEPWEERTDPGK 80 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 80 (459)
|||+++...+.|++.-...+.+.|+++ |.+|++++.+.+.+.++.. +.+ ++..++.. . ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~--~--~~----- 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--H--GA----- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC--c--cc-----
Confidence 589999988889999999999999987 9999999998887766543 244 33433211 0 00
Q ss_pred HHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEE
Q 012652 81 LIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAV 133 (459)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~ 133 (459)
.....+.++.+.+++ .+||++|.-....-...++...|+|...
T Consensus 64 -------~~~~~~~~l~~~l~~---~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 -------LEIGERRKLGHSLRE---KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHHHHHHHHHHTTT---TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -------cchHHHHHHHHHHHh---cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 011234566777777 8999998333334455678888999754
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.84 E-value=0.00027 Score=60.61 Aligned_cols=83 Identities=8% Similarity=0.039 Sum_probs=62.2
Q ss_pred Ccee-ecccchh---hhhcCCCccceeecc---C-chhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCC
Q 012652 333 RGQM-IGWAPQQ---RVLSHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDES 404 (459)
Q Consensus 333 nv~i-~~~vpq~---~iL~~~~~~~~I~Hg---G-~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 404 (459)
+|.+ .+++++. .++..+++ +|.-. | ..++.||+++|+|+|+... ......+ . -+.|..++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEec----
Confidence 8999 9999854 58999998 66432 2 4688999999999998843 3444455 4 36777774
Q ss_pred CcccHHHHHHHHHHHhC-CHHHHHH
Q 012652 405 GIITGEEISNKLVQVLG-DQNFKAR 428 (459)
Q Consensus 405 ~~~~~~~l~~~i~~ll~-~~~~~~~ 428 (459)
.-+.+++.++|.++++ |++.+++
T Consensus 164 -~~~~~~l~~~i~~l~~~~~~~~~~ 187 (200)
T 2bfw_A 164 -AGDPGELANAILKALELSRSDLSK 187 (200)
T ss_dssp -TTCHHHHHHHHHHHHHCCHHHHHH
T ss_pred -CCCHHHHHHHHHHHHhcCHHHHHH
Confidence 3478999999999999 8864443
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.80 E-value=0.00019 Score=71.55 Aligned_cols=142 Identities=10% Similarity=0.064 Sum_probs=95.4
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEE--cCCCCCCCCCCCChhHHH-----HhcCCceeecccchhh--
Q 012652 274 KSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVV--RPDITTDANDVYPRGFQE-----RVATRGQMIGWAPQQR-- 344 (459)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~-----~~~~nv~i~~~vpq~~-- 344 (459)
..++|.+|++..+..++.++...+.+++.+..++|.. +.. ........+ .+.+.+.+.+.+|+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~------~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~l 513 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS------NGITHPYVERFIKSYLGDSATAHPHSPYHQYL 513 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC------CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC------chhhHHHHHHHHHcCCCccEEEcCCCCHHHHH
Confidence 3699999999888899999999888888887777643 321 011122221 2456777888888765
Q ss_pred -hhcCCCcccee---eccCchhHHHhhhcCCceeccccccc-cchhhhhhhceeeeeee-eecCCCCcccHHHHHHHHHH
Q 012652 345 -VLSHPSIACFL---SHCGWNSTMEGVSNGIPFLCWPYFVD-QFLNESYICDIWKVGLK-LDKDESGIITGEEISNKLVQ 418 (459)
Q Consensus 345 -iL~~~~~~~~I---~HgG~~s~~eal~~gvP~v~~P~~~D-Q~~na~rv~~~~G~G~~-~~~~~~~~~~~~~l~~~i~~ 418 (459)
.+..+|+ |+ ..+|.+|+.||+++|||+|.++-..= -..-+..+.. .|+.-. +. -+.++..+...+
T Consensus 514 a~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~ 584 (631)
T 3q3e_A 514 RILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVR 584 (631)
T ss_dssp HHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHH
T ss_pred HHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHH
Confidence 5588888 54 34788999999999999999864321 1111222333 466542 32 268888999999
Q ss_pred HhCCHHHHHHHH
Q 012652 419 VLGDQNFKARAL 430 (459)
Q Consensus 419 ll~~~~~~~~a~ 430 (459)
+.+|++.++..+
T Consensus 585 La~D~~~l~~LR 596 (631)
T 3q3e_A 585 LAENHQERLELR 596 (631)
T ss_dssp HHHCHHHHHHHH
T ss_pred HhCCHHHHHHHH
Confidence 999987555443
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.79 E-value=0.00078 Score=63.49 Aligned_cols=105 Identities=21% Similarity=0.164 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHhhhhccCCCCCCeE-EEecCCCCCCCCCCCCh
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEYNHKRVMKSLEGKNYLGEQIR-LVSIPDGMEPWEERTDP 78 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~ 78 (459)
+.+|||++-..+.|++.-+..+.+.|+++ +.+|++++.+.+.+.++.. +.++ +..++.. ..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~--------~~ 70 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK--------GR 70 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS--------SH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc--------cc
Confidence 36799999999999999999999999987 9999999999888877654 3454 4444321 01
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCCCCCc-cEEEeCCCcchHHHHHHHcCCceEE
Q 012652 79 GKLIEKVLQVMPGKLEELIEEINGRDDEKI-DCFISDGFMGWSMEVAEKMKLRRAV 133 (459)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~p-Dlvi~D~~~~~~~~~A~~~giP~i~ 133 (459)
.. .+ ..+.++++.++. .+| |++|.-....-...++...|+|..+
T Consensus 71 ~~---~~-----~~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 71 HN---SI-----SGLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HH---HH-----HHHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cc---cH-----HHHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 11 11 123345556665 789 9999765555566778889999765
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.60 E-value=0.001 Score=69.07 Aligned_cols=142 Identities=16% Similarity=0.168 Sum_probs=95.9
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHH------hcCCceeecccchhh--
Q 012652 273 PKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQER------VATRGQMIGWAPQQR-- 344 (459)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~nv~i~~~vpq~~-- 344 (459)
+..+||++|-+..+..++.+..-.+.+++.+.-++|....... ...++.+. -++.+.+.+.+|..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~------~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV------GEPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG------GHHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH------HHHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 4569999999999999999999999999998888888765411 11222211 135677778888665
Q ss_pred -hhcCCCccceee---ccCchhHHHhhhcCCceecccccc-ccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHH
Q 012652 345 -VLSHPSIACFLS---HCGWNSTMEGVSNGIPFLCWPYFV-DQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQV 419 (459)
Q Consensus 345 -iL~~~~~~~~I~---HgG~~s~~eal~~gvP~v~~P~~~-DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~l 419 (459)
.+..+|+ ++- .+|.+|+.|||+.|||+|.++-.. =-..-+..+.. +|+.-.+- -+.++-.+...++
T Consensus 595 ~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia------~~~~~Y~~~a~~l 665 (723)
T 4gyw_A 595 RRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA------KNRQEYEDIAVKL 665 (723)
T ss_dssp HHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC------SSHHHHHHHHHHH
T ss_pred HHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc------CCHHHHHHHHHHH
Confidence 5566666 654 889999999999999999998321 12223334444 57766553 2556666666666
Q ss_pred hCCHHHHHHH
Q 012652 420 LGDQNFKARA 429 (459)
Q Consensus 420 l~~~~~~~~a 429 (459)
-+|++..+..
T Consensus 666 a~d~~~l~~l 675 (723)
T 4gyw_A 666 GTDLEYLKKV 675 (723)
T ss_dssp HHCHHHHHHH
T ss_pred hcCHHHHHHH
Confidence 6676544433
No 54
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.23 E-value=0.012 Score=54.56 Aligned_cols=46 Identities=17% Similarity=0.153 Sum_probs=41.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHhh
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~v~~~ 49 (459)
+|||++...+-|++.-+..+.+.|+++ +.+|++++.+.+.+.++..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 589999999999999999999999987 9999999999888887654
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.21 E-value=0.00044 Score=64.72 Aligned_cols=109 Identities=15% Similarity=0.138 Sum_probs=79.1
Q ss_pred Cceeecccchhhh---hcCCCccceeeccC---------chhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeee
Q 012652 333 RGQMIGWAPQQRV---LSHPSIACFLSHCG---------WNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLD 400 (459)
Q Consensus 333 nv~i~~~vpq~~i---L~~~~~~~~I~HgG---------~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~ 400 (459)
||...+|+|+.++ |..++.+++.+-+. .+-+.|++++|+|+|+. +...++..+++ .|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHh-CCeEEEeC
Confidence 8999999999764 55556644543332 24578999999999975 45678888888 59999884
Q ss_pred cCCCCcccHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012652 401 KDESGIITGEEISNKLVQVLGDQ--NFKARALELKEITMSSVREGGSSYKTFQNFLEWV 457 (459)
Q Consensus 401 ~~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (459)
+.+++.+++.++..+. .+++|+++.++.+++ +....+.+.+.+.++
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 3688999998875432 578888888887775 556666666665544
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.86 E-value=0.0013 Score=63.51 Aligned_cols=84 Identities=17% Similarity=0.096 Sum_probs=58.1
Q ss_pred CCceeecccchh---hhhcCCCccceeecc---Cc-hhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCC
Q 012652 332 TRGQMIGWAPQQ---RVLSHPSIACFLSHC---GW-NSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDES 404 (459)
Q Consensus 332 ~nv~i~~~vpq~---~iL~~~~~~~~I~Hg---G~-~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 404 (459)
++|.+.+++|+. +++..+|+ ||.-+ |. .++.||+++|+|+|+- ..+ ....+++ -..|+.++
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~-~~~G~lv~---- 362 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNW-HSNIVSLE---- 362 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGT-BTTEEEES----
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhc-CCCEEEeC----
Confidence 578888999876 48999998 66422 33 5679999999999983 222 2234444 24677774
Q ss_pred CcccHHHHHHHHHHHhCCHHHHHH
Q 012652 405 GIITGEEISNKLVQVLGDQNFKAR 428 (459)
Q Consensus 405 ~~~~~~~l~~~i~~ll~~~~~~~~ 428 (459)
.-++++|.++|.++++|++.+++
T Consensus 363 -~~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 363 -QLNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp -SCSHHHHHHHHHHHHHHTC----
T ss_pred -CCCHHHHHHHHHHHHcCHHHHHH
Confidence 34789999999999998876665
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.48 E-value=0.06 Score=53.69 Aligned_cols=135 Identities=7% Similarity=0.064 Sum_probs=74.5
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHh---hCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchh---hhhcC
Q 012652 275 SVIYVAFGSHTVLDHNQFQELALGLE---ICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQ---RVLSH 348 (459)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~---~iL~~ 348 (459)
.++++..|... +.+-+..+++|+. +.+.+++++..+.. .....-.......+.++.+....+.. .++..
T Consensus 327 ~p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 401 (536)
T 3vue_A 327 IPLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAG 401 (536)
T ss_dssp SCEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHH
T ss_pred CcEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHh
Confidence 34556678764 3334555555553 34556665544320 00000011223456788888777764 47888
Q ss_pred CCccceeecc---C-chhHHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCC-----CCcccHHHHHHHHHHH
Q 012652 349 PSIACFLSHC---G-WNSTMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDE-----SGIITGEEISNKLVQV 419 (459)
Q Consensus 349 ~~~~~~I~Hg---G-~~s~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~-----~~~~~~~~l~~~i~~l 419 (459)
+|+ ||.-. | ..+++||+++|+|+|+.... .....|.+ -.-|....... ....+.+.|.++|+++
T Consensus 402 aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~d-g~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 402 ADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIE-GKTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCB-TTTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred hhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeC-CCCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 888 76532 3 35889999999999998543 22223332 12222111100 1345688999999987
Q ss_pred hC
Q 012652 420 LG 421 (459)
Q Consensus 420 l~ 421 (459)
+.
T Consensus 475 l~ 476 (536)
T 3vue_A 475 IK 476 (536)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=93.31 E-value=0.22 Score=43.62 Aligned_cols=113 Identities=15% Similarity=0.091 Sum_probs=63.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIE 83 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (459)
||||+.---+. |.--+..|++.|++.| +|+++.+...++...... .....+++..+..+.. ...+....-
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----t~~~pl~~~~~~~~~~--~~v~GTPaD-- 71 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFY--TVIDGTPAD-- 71 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEE--EETTCCHHH--
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce----ecCCCeEEEEecCCCe--EEECCCHHH--
Confidence 78887764444 5556888999999888 999999987765543221 1223455554432210 000111111
Q ss_pred HHHHhccHHHHHHHHHHhCCCCCCccEEEeC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012652 84 KVLQVMPGKLEELIEEINGRDDEKIDCFISD----------GFMG---WSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 84 ~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D----------~~~~---~~~~~A~~~giP~i~~~~ 136 (459)
++.--+..+-. ..+||+||+. .+++ .++.-|..+|||.|.++.
T Consensus 72 --------CV~lal~~l~~--~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 72 --------CVHLGYRVILE--EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp --------HHHHHHHTTTT--TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred --------HHHHHHHHhcC--CCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 11212222211 0589999963 3444 344556779999999864
No 59
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=92.33 E-value=1.6 Score=36.66 Aligned_cols=97 Identities=11% Similarity=0.085 Sum_probs=65.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc------hHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN------HKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERT 76 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 76 (459)
+-.|++++..+.|=..-.+.+|-+.+.+|++|.|+..-.. ...++.. ++.+.....++... ..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L---------~v~~~~~g~gf~~~--~~ 96 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH---------GVEFQVMATGFTWE--TQ 96 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG---------TCEEEECCTTCCCC--GG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC---------CcEEEEcccccccC--CC
Confidence 3578899999999999999999999999999999954321 1233332 57777776644321 11
Q ss_pred ChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc
Q 012652 77 DPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM 117 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~ 117 (459)
...+ -.......++.+.+.+.+ .++|+||.|-+.
T Consensus 97 ~~~~----~~~~a~~~l~~a~~~l~~---~~yDlvILDEi~ 130 (196)
T 1g5t_A 97 NREA----DTAACMAVWQHGKRMLAD---PLLDMVVLDELT 130 (196)
T ss_dssp GHHH----HHHHHHHHHHHHHHHTTC---TTCSEEEEETHH
T ss_pred CcHH----HHHHHHHHHHHHHHHHhc---CCCCEEEEeCCC
Confidence 1111 122235566677777666 899999999763
No 60
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=90.41 E-value=0.63 Score=40.95 Aligned_cols=112 Identities=15% Similarity=0.131 Sum_probs=60.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIE 83 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (459)
.|||+.---+. +.--+..|+++|.+.| +|+++.+...++..-... .....+++..+.... ....+.-...|
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si----T~~~pl~~~~~~~~~--~~~v~GTPaDC- 72 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDF--YTVIDGTPADC- 72 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTE--EEETTCCHHHH-
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc----CCCCCceeEEeeccc--eeecCCChHHH-
Confidence 46776654333 3345778899999888 599998877765543221 122345554432110 00001111111
Q ss_pred HHHHhccHHHHHHHHH-HhCCCCCCccEEEe----------CCCcc---hHHHHHHHcCCceEEEeC
Q 012652 84 KVLQVMPGKLEELIEE-INGRDDEKIDCFIS----------DGFMG---WSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 84 ~~~~~~~~~~~~l~~~-l~~~~~~~pDlvi~----------D~~~~---~~~~~A~~~giP~i~~~~ 136 (459)
+.--+.. +.+ .+||+||+ |.+++ .++.-|..+|||.|+++.
T Consensus 73 ---------V~lal~~~l~~---~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 73 ---------VHLGYRVILEE---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ---------HHHHHHTTTTT---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ---------HhhhhhhhcCC---CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 1111222 223 68999998 44444 345556789999999873
No 61
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=90.21 E-value=0.93 Score=44.25 Aligned_cols=106 Identities=8% Similarity=-0.078 Sum_probs=69.8
Q ss_pred Cceeecccchh---hhhcCCCccceee---ccCchh-HHHhhhcC---Cceeccccccccchhhhhhhceee-eeeeeec
Q 012652 333 RGQMIGWAPQQ---RVLSHPSIACFLS---HCGWNS-TMEGVSNG---IPFLCWPYFVDQFLNESYICDIWK-VGLKLDK 401 (459)
Q Consensus 333 nv~i~~~vpq~---~iL~~~~~~~~I~---HgG~~s-~~eal~~g---vP~v~~P~~~DQ~~na~rv~~~~G-~G~~~~~ 401 (459)
.|.+...+|+. .++..+++ |+. .=|+|. ..||+++| .|+|+.-+.+ .+ ++ +| -|+.++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~---~~-l~~~allVn- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA---EV-LGEYCRSVN- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH---HH-HGGGSEEEC-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH---HH-hCCCEEEEC-
Confidence 56777778874 58888888 553 357775 57999996 6666552221 12 22 33 367774
Q ss_pred CCCCcccHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Q 012652 402 DESGIITGEEISNKLVQVLGDQ--NFKARALELKEITMSSVREGGSSYKTFQNFLEWVK 458 (459)
Q Consensus 402 ~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (459)
..+.++++++|.++|.++ +-+++.+++.+.+++ .+...-.++|++.+.
T Consensus 422 ----P~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 422 ----PFDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLA 471 (496)
T ss_dssp ----TTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHh
Confidence 458999999999999765 344455555555543 566777888887764
No 62
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=90.14 E-value=1.9 Score=42.14 Aligned_cols=104 Identities=12% Similarity=0.052 Sum_probs=64.9
Q ss_pred cee-ecccchhh---hhcCCCccceeec---cCch-hHHHhhhcCC-----ceeccccccccchhhhhhhceeeeeeeee
Q 012652 334 GQM-IGWAPQQR---VLSHPSIACFLSH---CGWN-STMEGVSNGI-----PFLCWPYFVDQFLNESYICDIWKVGLKLD 400 (459)
Q Consensus 334 v~i-~~~vpq~~---iL~~~~~~~~I~H---gG~~-s~~eal~~gv-----P~v~~P~~~DQ~~na~rv~~~~G~G~~~~ 400 (459)
+.. .+.+++.+ ++..+|+ ||.- =|.| ++.||+++|+ |+|+.-..+ .+. + +.-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~---~-l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN---E-LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG---T-CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH---H-hCCeEEEC
Confidence 443 47888764 7889998 6643 3554 7789999998 676653221 111 1 22355564
Q ss_pred cCCCCcccHHHHHHHHHHHhCCH-H-HHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012652 401 KDESGIITGEEISNKLVQVLGDQ-N-FKARALELKEITMSSVREGGSSYKTFQNFLEWV 457 (459)
Q Consensus 401 ~~~~~~~~~~~l~~~i~~ll~~~-~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (459)
..+.++++++|.++|+++ + -++..++.++.+++ -+..+..+++++.+
T Consensus 403 -----p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l 451 (482)
T 1uqt_A 403 -----PYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDL 451 (482)
T ss_dssp -----TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHH
Confidence 347899999999999853 3 33344444444433 35666777776655
No 63
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=88.63 E-value=1.9 Score=43.70 Aligned_cols=45 Identities=13% Similarity=0.069 Sum_probs=32.7
Q ss_pred CCceee---cccchh---------hhhcCCCccceeecc---C-chhHHHhhhcCCceecccc
Q 012652 332 TRGQMI---GWAPQQ---------RVLSHPSIACFLSHC---G-WNSTMEGVSNGIPFLCWPY 378 (459)
Q Consensus 332 ~nv~i~---~~vpq~---------~iL~~~~~~~~I~Hg---G-~~s~~eal~~gvP~v~~P~ 378 (459)
++|+++ .|++.. +++..+++ ||.-. | ..+.+||+++|+|+|+.-.
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 445543 788764 58999998 66543 3 3588899999999999744
No 64
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=88.28 E-value=0.74 Score=39.19 Aligned_cols=48 Identities=25% Similarity=0.265 Sum_probs=39.5
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (459)
|+ +.||++...++.|-+. ...|.++|+++|++|.++.++.....+...
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 66 5688877777777666 899999999999999999998887777544
No 65
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=86.75 E-value=7.3 Score=35.52 Aligned_cols=35 Identities=17% Similarity=0.126 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++||+|+..+. ......++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 5689999997653 3345568888899999877653
No 66
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=86.52 E-value=1.3 Score=34.85 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=36.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|++.||++.+.++-.|-....-++..|..+|++|.++...
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 7778999999999999999999999999999999988754
No 67
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=85.95 E-value=3.2 Score=36.24 Aligned_cols=114 Identities=11% Similarity=0.062 Sum_probs=62.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIE 83 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (459)
||||+.---+. |.--+..|++.|++.| +|+++.+...++.+.... .....+++..+..+ ++ ...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~--~~-----~~~--- 64 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI----TIHVPLWMKKVFIS--ER-----VVA--- 64 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC----CCSSCCCEEECCCS--SS-----EEE---
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccC--CC-----Cce---
Confidence 46766653333 4445788999998888 899999987765553321 12224555554322 00 000
Q ss_pred HHHHhccH-HHHHHHHHHhCCCCCCccEEEeC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012652 84 KVLQVMPG-KLEELIEEINGRDDEKIDCFISD----------GFMG---WSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 84 ~~~~~~~~-~~~~l~~~l~~~~~~~pDlvi~D----------~~~~---~~~~~A~~~giP~i~~~~ 136 (459)
+...-.+. ++.--+..+-. .+||+||+. .+++ .++.-|..+|||.|.++.
T Consensus 65 ~~v~GTPaDCV~lal~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 65 YSTTGTPADCVKLAYNVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp EEESSCHHHHHHHHHHTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEECCcHHHHHHHHHHhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 00001111 22222333333 689999963 3333 344556779999999865
No 68
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=85.83 E-value=2.3 Score=37.88 Aligned_cols=113 Identities=16% Similarity=0.066 Sum_probs=63.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIE 83 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (459)
||||+.---+. +.--+..|++.|++.| +|+++.+...++.+-... .....+++..++.+ ... .
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si----Tl~~pl~~~~~~~~--~~~------~--- 63 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI----TLHKPLRMYEVDLC--GFR------A--- 63 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC----CCSSCBCEEEEECS--SSE------E---
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccC--CCc------e---
Confidence 46776654333 4445788999999888 999999987765543221 12224444444321 000 0
Q ss_pred HHHHhcc-HHHHHHHHHHhCCCCCCccEEEeC-----------CCcc---hHHHHHHHcCCceEEEeCc
Q 012652 84 KVLQVMP-GKLEELIEEINGRDDEKIDCFISD-----------GFMG---WSMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 84 ~~~~~~~-~~~~~l~~~l~~~~~~~pDlvi~D-----------~~~~---~~~~~A~~~giP~i~~~~~ 137 (459)
+.....+ .++.--+..+ . .+||+||+. .+++ .++.-|..+|||.|.++..
T Consensus 64 ~~v~GTPaDCV~lal~~l-~---~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 64 IATSGTPSDTVYLATFGL-G---RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp EEESSCHHHHHHHHHHHH-T---SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEECCcHHHHHHHHHhcC-C---CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 0000111 1233333444 3 789999963 3333 3444567799999998753
No 69
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=85.26 E-value=5.8 Score=36.38 Aligned_cols=104 Identities=13% Similarity=0.005 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC-C-------cchHHHHhhhhccCCCCCCeEEEecCCCCCCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS-E-------YNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPW 72 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~-~-------~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~ 72 (459)
|.++||+|+. --+....+.++|.++||+|..+.+ + ...+...+. ++.+..... +...
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~---------gIpv~~~~~-~~~~ 84 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD---------GVPVFKYSR-WRAK 84 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH---------TCCEEECSC-CEET
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc---------CCCEEecCc-cccc
Confidence 4468999983 224445577899999999976654 2 222333333 666555432 1000
Q ss_pred CCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 73 EERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
.... .++++.+++ .+||++|.-.+.. -...+-......++-++++..
T Consensus 85 --------------~~~~---~~~~~~l~~---~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSLL 132 (329)
T 2bw0_A 85 --------------GQAL---PDVVAKYQA---LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLL 132 (329)
T ss_dssp --------------TEEC---HHHHHHHHT---TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCT
T ss_pred --------------cccc---HHHHHHHHh---cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCcC
Confidence 0011 233444444 8999999876532 333334445556777766643
No 70
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=85.12 E-value=3.6 Score=35.81 Aligned_cols=115 Identities=11% Similarity=0.084 Sum_probs=62.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIE 83 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (459)
||||+.---+. |.--+..|++.|++.| +|+++.+...++.+-... .....+++..++.+.+... . ..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~-~-~~----- 67 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI----TIAHPVRAYPHPSPLHAPH-F-PA----- 67 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC----CCSSCBEEEECCCCTTSCC-C-CE-----
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCcCCCC-C-ce-----
Confidence 46766654333 4445788999998888 899999987755443221 2234666666643211000 0 00
Q ss_pred HHHHhccH-HHHHHHHHHhCCCCCCccEEEeC----------CCcc---hHHHHHHHcCCceEEEeC
Q 012652 84 KVLQVMPG-KLEELIEEINGRDDEKIDCFISD----------GFMG---WSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 84 ~~~~~~~~-~~~~l~~~l~~~~~~~pDlvi~D----------~~~~---~~~~~A~~~giP~i~~~~ 136 (459)
+.....+. ++.--+. + . .+||+||+. .+++ .++.-|..+|||.|.++.
T Consensus 68 ~~v~GTPaDCV~lal~-l-~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 68 YRVRGTPADCVALGLH-L-F---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp EEEESCHHHHHHHHHH-H-S---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEcCcHHHHHHHHHc-C-C---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 00000111 1111122 3 2 689999963 3333 344556779999999864
No 71
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=84.97 E-value=0.44 Score=45.66 Aligned_cols=39 Identities=8% Similarity=0.219 Sum_probs=30.4
Q ss_pred CCEEEEEcCCCc-----cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQ-----GHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~-----gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
+|||++++.... |=......+|++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 689998774321 333568899999999999999999854
No 72
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=83.53 E-value=8.1 Score=32.18 Aligned_cols=83 Identities=13% Similarity=0.152 Sum_probs=52.7
Q ss_pred CEEE-EEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHH
Q 012652 4 PHIL-VFS-TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKL 81 (459)
Q Consensus 4 ~~il-~~~-~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 81 (459)
||++ |+. -++.|=..-...||..|+++|++|.++-.+.......-.. ....++.+.....
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~----~~~~~~~~~~~~~-------------- 62 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSK----AGKAAFDVFTAAS-------------- 62 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHT----TSCCSSEEEECCS--------------
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHh----cCCCCCcEEecCc--------------
Confidence 3555 443 4466889999999999999999999998765443332221 1112344433221
Q ss_pred HHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc
Q 012652 82 IEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM 117 (459)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~ 117 (459)
..+.++++.++ .++|+||.|.-.
T Consensus 63 ---------~~l~~~l~~l~----~~yD~viiD~~~ 85 (206)
T 4dzz_A 63 ---------EKDVYGIRKDL----ADYDFAIVDGAG 85 (206)
T ss_dssp ---------HHHHHTHHHHT----TTSSEEEEECCS
T ss_pred ---------HHHHHHHHHhc----CCCCEEEEECCC
Confidence 34566666665 469999999753
No 73
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=83.21 E-value=1.8 Score=33.99 Aligned_cols=47 Identities=23% Similarity=0.277 Sum_probs=37.0
Q ss_pred CCEEEE-EcCC-CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012652 3 SPHILV-FSTP-AQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 3 ~~~il~-~~~~-~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (459)
.||+|+ +..| ...-+--.+=++..|+++||+|+++++++....++-.
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 567774 4455 3466777788899999999999999998888887654
No 74
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=83.07 E-value=1.2 Score=44.14 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=28.6
Q ss_pred CCEEEEEcC---C---CccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFST---P---AQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~---~---~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+|||||++. | ..|=-.-.-+|+++|+++||+|+++++.
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 699999973 2 1232234668999999999999999964
No 75
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=81.61 E-value=13 Score=31.77 Aligned_cols=145 Identities=12% Similarity=0.049 Sum_probs=80.5
Q ss_pred CCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhc-CCceeecccchhhhhcCCC
Q 012652 272 QPKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVA-TRGQMIGWAPQQRVLSHPS 350 (459)
Q Consensus 272 ~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~nv~i~~~vpq~~iL~~~~ 350 (459)
.++.++.|..|.++ ...++.|.+.|..+.++... +.+.+.+... .++.....--+.+.|..++
T Consensus 30 ~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~---------~~~~l~~l~~~~~i~~i~~~~~~~dL~~ad 93 (223)
T 3dfz_A 30 KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT---------VSAEINEWEAKGQLRVKRKKVGEEDLLNVF 93 (223)
T ss_dssp TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS---------CCHHHHHHHHTTSCEEECSCCCGGGSSSCS
T ss_pred CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC---------CCHHHHHHHHcCCcEEEECCCCHhHhCCCC
Confidence 34668888777432 34455666678887666432 1223322222 3354443323345577777
Q ss_pred ccceeeccCchhHHHhhh----cCCceeccccccccchhhh-----hhhceeeeeeeeecCCCCcccHHHHHHHHHHHhC
Q 012652 351 IACFLSHCGWNSTMEGVS----NGIPFLCWPYFVDQFLNES-----YICDIWKVGLKLDKDESGIITGEEISNKLVQVLG 421 (459)
Q Consensus 351 ~~~~I~HgG~~s~~eal~----~gvP~v~~P~~~DQ~~na~-----rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 421 (459)
+ +|.--|.-.+.+.++ .|+|+-++ |.+..+. .+.+ -++-+.+...+....-+..|++.|.+++.
T Consensus 94 L--VIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~r-g~l~iaIST~G~sP~la~~iR~~ie~~lp 166 (223)
T 3dfz_A 94 F--IVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSR-GRLSLAISTDGASPLLTKRIKEDLSSNYD 166 (223)
T ss_dssp E--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEE-TTEEEEEECTTSCHHHHHHHHHHHHHHSC
T ss_pred E--EEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEe-CCEEEEEECCCCCcHHHHHHHHHHHHHcc
Confidence 7 888888655554433 56776544 5555443 2333 14444444322344557888999988885
Q ss_pred CH--HHHHHHHHHHHHHHhh
Q 012652 422 DQ--NFKARALELKEITMSS 439 (459)
Q Consensus 422 ~~--~~~~~a~~l~~~~~~~ 439 (459)
.. .+-+.+.++++.+++.
T Consensus 167 ~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 167 ESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp THHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 42 6777888888888764
No 76
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=81.55 E-value=6.9 Score=36.90 Aligned_cols=36 Identities=8% Similarity=0.109 Sum_probs=27.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|+.+||+++..+.. .+.+++++++.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 35679999876653 3669999999999999997643
No 77
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=81.13 E-value=15 Score=29.57 Aligned_cols=145 Identities=17% Similarity=0.150 Sum_probs=82.7
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccc
Q 012652 274 KSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIAC 353 (459)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~ 353 (459)
+|.|-|-+||.+ +....++....++..+..+-.-+.. ..-.|+.+.+. +.+. ..-.+++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S------aHR~p~~l~~~----------~~~a---~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS------AHRTPDYMFEY----------AETA---RERGLKV 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTSHHHHHHH----------HHHT---TTTTCCE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEe------ccCCHHHHHHH----------HHHH---HhCCCcE
Confidence 557888888754 6677888888888888876544432 23445543211 1110 0111333
Q ss_pred eeeccCc----hhHHHhhhcCCceeccccccccchhhh----hhhc-eeeeee-eeecCCCCcccHHHHHHHHHHHhCCH
Q 012652 354 FLSHCGW----NSTMEGVSNGIPFLCWPYFVDQFLNES----YICD-IWKVGL-KLDKDESGIITGEEISNKLVQVLGDQ 423 (459)
Q Consensus 354 ~I~HgG~----~s~~eal~~gvP~v~~P~~~DQ~~na~----rv~~-~~G~G~-~~~~~~~~~~~~~~l~~~i~~ll~~~ 423 (459)
+|.=+|. .++..++ .-+|+|.+|.... ..++. -+.+ --|+.+ ++.+++.+..++..+...|. -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~-~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSK-ALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCT-TTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCC-CCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 7776664 3444444 4789999998542 11111 0111 025543 22221112345555665555 45789
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 012652 424 NFKARALELKEITMSSVRE 442 (459)
Q Consensus 424 ~~~~~a~~l~~~~~~~~~~ 442 (459)
+++++.+.+++..++.+.+
T Consensus 147 ~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887654
No 78
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=80.80 E-value=2 Score=35.43 Aligned_cols=44 Identities=11% Similarity=0.083 Sum_probs=35.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMK 48 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (459)
.||++...++.|=+ -...+.+.|+++|++|.++.++....++..
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 57887776766555 489999999999999999999877766543
No 79
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=79.20 E-value=4.6 Score=35.21 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=28.8
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 3 SPHILVFSTP--AQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 3 ~~~il~~~~~--~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
++|.+|++.. ..|=..-...|++.|+++|.+|.++=
T Consensus 20 m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 20 QGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 4566666533 44888999999999999999999983
No 80
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=79.01 E-value=1.6 Score=34.92 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=28.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|.+.||+++.. |++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 77788998854 4443 78899999999999999874
No 81
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=78.60 E-value=1.9 Score=36.46 Aligned_cols=43 Identities=16% Similarity=0.023 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCccCHH-HHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012652 3 SPHILVFSTPAQGHVI-PLLEFSQCLAKHGFRVTFVNSEYNHKRV 46 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~-p~~~La~~L~~rGh~Vt~~~~~~~~~~v 46 (459)
+.||++...++ +..+ -...+.++|+++|++|.++.++.....+
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 56888777676 5555 8999999999999999999987766554
No 82
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=78.30 E-value=7.3 Score=32.65 Aligned_cols=44 Identities=20% Similarity=0.190 Sum_probs=35.1
Q ss_pred cHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeCcch
Q 012652 90 PGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 90 ~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~~~~ 139 (459)
....++.++.+++ .++|+||.|. .+..+|+++|+|.+.+.++..
T Consensus 128 ~~e~~~~i~~l~~---~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 128 EDEITTLISKVKT---ENIKIVVSGK---TVTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp GGGHHHHHHHHHH---TTCCEEEECH---HHHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHHHHHHH---CCCeEEECCH---HHHHHHHHcCCcEEEEecCHH
Confidence 3456778888888 8999999985 458889999999998766433
No 83
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=78.28 E-value=2.9 Score=35.14 Aligned_cols=45 Identities=18% Similarity=0.189 Sum_probs=36.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHHhh
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKH-GFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~v~~~ 49 (459)
+||++...++.|-+. ...+.+.|+++ |++|.++.++.....+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 478877777766655 99999999999 9999999998877777643
No 84
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=77.33 E-value=27 Score=28.51 Aligned_cols=146 Identities=16% Similarity=0.176 Sum_probs=82.7
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccc
Q 012652 274 KSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIAC 353 (459)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~ 353 (459)
.+.|-|-+||.. +....++....++..+..+-.-+-. ..-.|+.+.+. +.+. ..-.+++
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S------aHR~p~~l~~~----------~~~a---~~~g~~V 79 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS------AHRTPDRLADY----------ARTA---AERGLNV 79 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTCHHHHHHH----------HHHT---TTTTCCE
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEc------ccCCHHHHHHH----------HHHH---HhCCCcE
Confidence 446777788654 6677888888888888876544432 23455543211 1110 0111333
Q ss_pred eeeccCc----hhHHHhhhcCCceeccccccccchhhh----hhhc-eeeeee-eeecCCCCcccHHHHHHHHHHHhCCH
Q 012652 354 FLSHCGW----NSTMEGVSNGIPFLCWPYFVDQFLNES----YICD-IWKVGL-KLDKDESGIITGEEISNKLVQVLGDQ 423 (459)
Q Consensus 354 ~I~HgG~----~s~~eal~~gvP~v~~P~~~DQ~~na~----rv~~-~~G~G~-~~~~~~~~~~~~~~l~~~i~~ll~~~ 423 (459)
||.=+|. .++..++ .-+|+|.+|.... ..++. -+.+ --|+.+ .+.+++.+..++..+...|. -+.|+
T Consensus 80 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~-~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 156 (182)
T 1u11_A 80 IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESR-ALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASIL-ALYNP 156 (182)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCT-TTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-GGGCH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCC-CCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHH-ccCCH
Confidence 7776663 4555555 4899999998542 11111 0112 025553 23221112345555555554 45689
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q 012652 424 NFKARALELKEITMSSVREG 443 (459)
Q Consensus 424 ~~~~~a~~l~~~~~~~~~~~ 443 (459)
+++++.+..++..++.+.+.
T Consensus 157 ~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 157 ALAARLETWRALQTASVPNS 176 (182)
T ss_dssp HHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998765543
No 85
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=76.75 E-value=32 Score=29.14 Aligned_cols=103 Identities=13% Similarity=0.138 Sum_probs=57.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEe-CCcch---HHHHhhhhccCCCCCCeEEEecCCC-CCCCCCCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGF--RVTFVN-SEYNH---KRVMKSLEGKNYLGEQIRLVSIPDG-MEPWEERT 76 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh--~Vt~~~-~~~~~---~~v~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~ 76 (459)
+||+|+..+..+ .+..+.++|.+.+| +|..+. .+... +..++. ++.+..++.. +.
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~~------ 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH---------NVECKVIQRKEFP------ 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH---------TCCEEECCGGGSS------
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc---------CCCEEEeCccccc------
Confidence 588888766543 46777888888888 765554 43222 233443 6776654321 11
Q ss_pred ChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEeCcc
Q 012652 77 DPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM-GWSMEVAEKMKLRRAVIWTSC 138 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~-~~~~~~A~~~giP~i~~~~~~ 138 (459)
+ .+. .++.+.+.++. .+||+++.-.+. .-...+-+.+...++-++++.
T Consensus 64 ~----r~~----~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 112 (216)
T 2ywr_A 64 S----KKE----FEERMALELKK------KGVELVVLAGFMRILSHNFLKYFPNKVINIHPSL 112 (216)
T ss_dssp S----HHH----HHHHHHHHHHH------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESSC
T ss_pred c----hhh----hhHHHHHHHHh------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCCc
Confidence 0 011 12223344444 899999987652 233444455555677666653
No 86
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=76.35 E-value=16 Score=33.46 Aligned_cols=43 Identities=14% Similarity=0.110 Sum_probs=34.6
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012652 4 PHILVFS-TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRV 46 (459)
Q Consensus 4 ~~il~~~-~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v 46 (459)
++|+|++ -++.|=..-...+|..|+++|++|.++..+......
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~l~ 59 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHNLS 59 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCHHH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCChh
Confidence 5677666 456699999999999999999999999987655433
No 87
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=75.58 E-value=5.5 Score=37.26 Aligned_cols=41 Identities=20% Similarity=0.143 Sum_probs=32.9
Q ss_pred CEEEEEcCC-CccCHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012652 4 PHILVFSTP-AQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKR 45 (459)
Q Consensus 4 ~~il~~~~~-~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~ 45 (459)
++|++++.- +.|-..-...+|..|+++|++|.++.. .....
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~-~~~~l 43 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL-AEPVL 43 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SCSHH
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CCCCh
Confidence 577777654 558999999999999999999999988 54433
No 88
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=75.56 E-value=5.1 Score=33.40 Aligned_cols=44 Identities=23% Similarity=0.216 Sum_probs=37.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMK 48 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (459)
.||++...++.|-+ -...+.++|+++|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 47888887887744 689999999999999999999887777765
No 89
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=75.32 E-value=3.5 Score=34.97 Aligned_cols=45 Identities=13% Similarity=0.243 Sum_probs=36.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (459)
+.||++...++.+-+. ...|.++|+++| +|.++.++....++...
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 5688888888877665 899999999999 99999998877666543
No 90
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=75.28 E-value=2.3 Score=39.20 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=32.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (459)
|+.+||+|+..++.| ..+|..|.+.||+|+++..+...+.+.+.
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~~ 44 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQTA 44 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHHC
Confidence 778899999877666 45789999999999999875444444443
No 91
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=74.59 E-value=38 Score=29.51 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=28.6
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 3 SPHILVFSTP--AQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 3 ~~~il~~~~~--~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
+++.+|++.. ..|=..-...|++.|+++|++|.++=
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 4566655533 44888999999999999999999984
No 92
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=74.49 E-value=10 Score=32.99 Aligned_cols=38 Identities=29% Similarity=0.386 Sum_probs=24.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
|++.+||++...-.=-...+-.....|+++|++|++++
T Consensus 1 ~~~~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 1 MSGLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp -CCCSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEE
Confidence 67777776654433334445555567778999988885
No 93
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=74.33 E-value=3.4 Score=35.01 Aligned_cols=44 Identities=16% Similarity=-0.044 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012652 2 SSPHILVFSTPAQGHVIP-LLEFSQCLAKHGFRVTFVNSEYNHKRV 46 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p-~~~La~~L~~rGh~Vt~~~~~~~~~~v 46 (459)
+..||++...++ +..+- ...+.+.|+++|++|.++.++.....+
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 356888777676 55665 899999999999999999997765433
No 94
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=72.97 E-value=12 Score=34.54 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=34.5
Q ss_pred CCEEEEEc-CCCccCHHHHHHHHHHHH--hCCCEEEEEeCCcchHH
Q 012652 3 SPHILVFS-TPAQGHVIPLLEFSQCLA--KHGFRVTFVNSEYNHKR 45 (459)
Q Consensus 3 ~~~il~~~-~~~~gH~~p~~~La~~L~--~rGh~Vt~~~~~~~~~~ 45 (459)
.++|+|++ -++-|=..-...||..|+ ++|++|.++..+.....
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~~~l 62 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAHNL 62 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCHH
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCCh
Confidence 35677666 456699999999999999 89999999998754433
No 95
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=72.25 E-value=28 Score=28.46 Aligned_cols=99 Identities=9% Similarity=-0.016 Sum_probs=51.5
Q ss_pred HHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchh
Q 012652 264 CLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQ 343 (459)
Q Consensus 264 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~ 343 (459)
+-.+|.+.. ...|+-|.. .-......++....+.++|-++... ..+.+... -+...++...++.
T Consensus 37 lg~~La~~g---~~lVsGGg~----~Gim~aa~~gAl~~gG~tigVlP~~-----~~~~~~~~----~~~~i~~~~~~~R 100 (176)
T 2iz6_A 37 LGKQIATHG---WILLTGGRS----LGVMHEAMKGAKEAGGTTIGVLPGP-----DTSEISDA----VDIPIVTGLGSAR 100 (176)
T ss_dssp HHHHHHHTT---CEEEEECSS----SSHHHHHHHHHHHTTCCEEEEECC----------CCTT----CSEEEECCCCSSS
T ss_pred HHHHHHHCC---CEEEECCCc----cCHhHHHHHHHHHcCCEEEEEeCch-----hhhhhccC----CceeEEcCCHHHH
Confidence 344555432 555555531 1233444555544566666665432 11111111 0113344566654
Q ss_pred -h-hhcCCCccceeeccCchhHH---HhhhcCCceeccccc
Q 012652 344 -R-VLSHPSIACFLSHCGWNSTM---EGVSNGIPFLCWPYF 379 (459)
Q Consensus 344 -~-iL~~~~~~~~I~HgG~~s~~---eal~~gvP~v~~P~~ 379 (459)
. +...++. .++--||.||+- |++.+++|++++|.+
T Consensus 101 k~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 101 DNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 2 4444554 566678888766 557799999999984
No 96
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=71.85 E-value=6.2 Score=35.21 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=24.6
Q ss_pred CCCCEEEEE-cCCCccCHHHH--HHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVF-STPAQGHVIPL--LEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~-~~~~~gH~~p~--~~La~~L~~rGh~Vt~~~~ 39 (459)
|+.||||++ ..|-..-++-. -.+.+.|.+.||+|+++--
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 668899955 45544333332 3457778889999999753
No 97
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=71.81 E-value=3.2 Score=34.35 Aligned_cols=45 Identities=13% Similarity=0.125 Sum_probs=34.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (459)
.||++...++.+=+ -...+.++|+++|++|.++.++....++...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 36776666666555 7889999999999999999998877666443
No 98
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=71.77 E-value=2.1 Score=35.95 Aligned_cols=45 Identities=7% Similarity=-0.008 Sum_probs=35.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMK 48 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (459)
+.||++...++.|=+. ...+.+.|+++|++|.++.++....++..
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 4578877777766664 78999999999999999999877666543
No 99
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=71.22 E-value=49 Score=28.34 Aligned_cols=103 Identities=16% Similarity=0.096 Sum_probs=58.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCC-cch---HHHHhhhhccCCCCCCeEEEecCC-CCCCCCCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSE-YNH---KRVMKSLEGKNYLGEQIRLVSIPD-GMEPWEER 75 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~-~~~---~~v~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~ 75 (459)
++||+|+..+..+ .+..+.+.|.+. +++|..+.+. ... +..++. ++.+..++. .+.
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~---------gIp~~~~~~~~~~----- 84 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA---------GVDALHMDPAAYP----- 84 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT---------TCEEEECCGGGSS-----
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc---------CCCEEEECccccc-----
Confidence 4699998766643 366777888776 6888666543 222 223333 787776542 111
Q ss_pred CChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEeCc
Q 012652 76 TDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM-GWSMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~-~~~~~~A~~~giP~i~~~~~ 137 (459)
+ . ...++.+.+.++. .+||+||.-.+. .-...+-..+...++-++++
T Consensus 85 -~----r----~~~~~~~~~~l~~------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 85 -S----R----TAFDAALAERLQA------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp -S----H----HHHHHHHHHHHHH------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred -c----h----hhccHHHHHHHHh------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 0 1112233344444 899999987663 33444455566667766665
No 100
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=71.17 E-value=39 Score=33.12 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=24.3
Q ss_pred HHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHc-------CCceEEE
Q 012652 93 LEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKM-------KLRRAVI 134 (459)
Q Consensus 93 ~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~-------giP~i~~ 134 (459)
++++++. .+||++|.... +..+|+++ |||++.+
T Consensus 430 l~~~i~~------~~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 430 LRSLVFT------DKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHH------TCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHh------cCCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 4455555 89999999964 35567777 9999874
No 101
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=71.02 E-value=40 Score=32.33 Aligned_cols=143 Identities=12% Similarity=-0.002 Sum_probs=79.9
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhc-CCceeecccchhhhhcCCCc
Q 012652 273 PKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVA-TRGQMIGWAPQQRVLSHPSI 351 (459)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~nv~i~~~vpq~~iL~~~~~ 351 (459)
++.++.+..|..+ ...++.|.+.+.++.++-... .+.+.+... .++....--.+.+.|..+++
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~---------~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l 75 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF---------IPQFTVWANEGMLTLVEGPFDETLLDSCWL 75 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC---------CHHHHHHHTTTSCEEEESSCCGGGGTTCSE
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC---------CHHHHHHHhcCCEEEEECCCCccccCCccE
Confidence 3668888777543 334455556677766665321 123222211 34444322223344556666
Q ss_pred cceeeccCchh-----HHHhhhcCCceeccccccccchhhhhh-----hce-eeeeeeeecCCCCcccHHHHHHHHHHHh
Q 012652 352 ACFLSHCGWNS-----TMEGVSNGIPFLCWPYFVDQFLNESYI-----CDI-WKVGLKLDKDESGIITGEEISNKLVQVL 420 (459)
Q Consensus 352 ~~~I~HgG~~s-----~~eal~~gvP~v~~P~~~DQ~~na~rv-----~~~-~G~G~~~~~~~~~~~~~~~l~~~i~~ll 420 (459)
+|.--|.-. ..+|-..|+|+-++ |++..+... .+. +-+|+. ...+...-+..|++.|.+.+
T Consensus 76 --Vi~at~~~~~n~~i~~~a~~~~i~vn~~----d~~e~~~~~~pa~~~~~~l~iaIs--T~Gksp~la~~ir~~ie~~l 147 (457)
T 1pjq_A 76 --AIAATDDDTVNQRVSDAAESRRIFCNVV----DAPKAASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLESLL 147 (457)
T ss_dssp --EEECCSCHHHHHHHHHHHHHTTCEEEET----TCTTSSSEECCEEEEETTEEEEEE--CTTSCHHHHHHHHHHHHHHS
T ss_pred --EEEcCCCHHHHHHHHHHHHHcCCEEEEC----CCcccCceEeeeEEEeCCeEEEEE--CCCCChHHHHHHHHHHHHhc
Confidence 888777654 34566789997444 444444332 121 234554 22223333789999999999
Q ss_pred CC--HHHHHHHHHHHHHHHhh
Q 012652 421 GD--QNFKARALELKEITMSS 439 (459)
Q Consensus 421 ~~--~~~~~~a~~l~~~~~~~ 439 (459)
.. ..+.+.+.++++++++.
T Consensus 148 ~~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 148 PQHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp CTTHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhh
Confidence 65 36777888888888765
No 102
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=70.92 E-value=32 Score=31.15 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=23.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++||+|+..+.. .....++|.+.||+|..+.+.
T Consensus 3 ~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 3 SLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeC
Confidence 689999886542 345557777789999866553
No 103
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=70.44 E-value=4.6 Score=35.31 Aligned_cols=35 Identities=11% Similarity=0.031 Sum_probs=26.5
Q ss_pred CCccEEE-eCCCcc-hHHHHHHHcCCceEEEeCcchh
Q 012652 106 EKIDCFI-SDGFMG-WSMEVAEKMKLRRAVIWTSCAA 140 (459)
Q Consensus 106 ~~pDlvi-~D~~~~-~~~~~A~~~giP~i~~~~~~~~ 140 (459)
..||+|| .|+..- -+..=|.++|||+|.+..+.+-
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~d 193 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSD 193 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTSC
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCCC
Confidence 5799985 665543 5677799999999998776553
No 104
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=69.39 E-value=32 Score=29.05 Aligned_cols=105 Identities=13% Similarity=0.093 Sum_probs=57.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCc-ch---HHHHhhhhccCCCCCCeEEEecCCC-CCCCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEY-NH---KRVMKSLEGKNYLGEQIRLVSIPDG-MEPWE 73 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~~~~~i~~~-~~~~~ 73 (459)
|++.||+++.++..+. +.+|.+++.+. .++|..+.+.. .. +..++. ++.+..++.. +..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~---------gIp~~~~~~~~~~~-- 70 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA---------GIATQVFKRKDFAS-- 70 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCGGGSSS--
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc---------CCCEEEeCccccCC--
Confidence 7788999887666544 45566666544 37888776532 22 233343 7777765421 110
Q ss_pred CCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEeCc
Q 012652 74 ERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM-GWSMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~-~~~~~~A~~~giP~i~~~~~ 137 (459)
... .++.+.+.++. .+||+++.-.+. .-...+-+.+.-.++-++++
T Consensus 71 --------r~~----~d~~~~~~l~~------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 --------KEA----HEDAILAALDV------LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp --------HHH----HHHHHHHHHHH------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred --------HHH----HHHHHHHHHHh------cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 001 12334444444 899999977653 23344445555566766655
No 105
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=69.07 E-value=4.6 Score=36.22 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=24.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
||||+.. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkILVTG--atGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGG--GTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 6777664 444443 46889999999999999754
No 106
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=68.81 E-value=6.8 Score=31.66 Aligned_cols=39 Identities=21% Similarity=0.253 Sum_probs=34.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
+.||++.+.++..|-....-++..|..+|++|.++....
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~ 56 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQ 56 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBC
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 568999999999999999999999999999999987543
No 107
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=68.79 E-value=8.4 Score=39.72 Aligned_cols=108 Identities=9% Similarity=0.039 Sum_probs=76.7
Q ss_pred cccchhhhhcCCCccceeeccCchhHHHhhhcCCceeccccccccchhhh---h--hhceeeeeeeeecCCCCcccHHHH
Q 012652 338 GWAPQQRVLSHPSIACFLSHCGWNSTMEGVSNGIPFLCWPYFVDQFLNES---Y--ICDIWKVGLKLDKDESGIITGEEI 412 (459)
Q Consensus 338 ~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~~gvP~v~~P~~~DQ~~na~---r--v~~~~G~G~~~~~~~~~~~~~~~l 412 (459)
++.+-.++|..+|+ +||= =...+.|.+..++|+|......|++.+.. . ..+ .--|..+ -+.++|
T Consensus 605 ~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~-~~pg~~~-------~~~~eL 673 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYME-DLPGPIY-------TEPYGL 673 (729)
T ss_dssp TCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTS-SSSSCEE-------SSHHHH
T ss_pred CCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhH-hCCCCeE-------CCHHHH
Confidence 45566789999998 9997 44567799999999999987777764421 0 011 1222222 468999
Q ss_pred HHHHHHHhCC-HHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012652 413 SNKLVQVLGD-QNFKARALELKEITMSSVREGGSSYKTFQNFLEWV 457 (459)
Q Consensus 413 ~~~i~~ll~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (459)
.++|.....+ ..|+++.+++.+.+-.. ++|.++.+.++.+++..
T Consensus 674 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 674 AKELKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HHHHTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHH
T ss_pred HHHHhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcC
Confidence 9999988753 57888888888887654 56788888888777654
No 108
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=68.49 E-value=9.1 Score=30.19 Aligned_cols=89 Identities=12% Similarity=0.070 Sum_probs=56.2
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHHHHHHhccHHHH
Q 012652 15 GHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIEKVLQVMPGKLE 94 (459)
Q Consensus 15 gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (459)
.+-.-++.+|+.|.+.|+++. ++......+++. ++....+......+. ....+.+.
T Consensus 34 ~dK~~l~~~a~~l~~lGf~i~--AT~GTa~~L~~~---------Gi~v~~v~k~~egg~-------------~~~~~~i~ 89 (143)
T 2yvq_A 34 SFRPRFLGVAEQLHNEGFKLF--ATEATSDWLNAN---------NVPATPVAWPSQEGQ-------------NPSLSSIR 89 (143)
T ss_dssp GGHHHHHHHHHHHHTTTCEEE--EEHHHHHHHHHT---------TCCCEEECCGGGC------------------CBCHH
T ss_pred cchHHHHHHHHHHHHCCCEEE--ECchHHHHHHHc---------CCeEEEEEeccCCCc-------------ccccccHH
Confidence 456778899999999999743 344666777765 666655542211100 00003344
Q ss_pred HHHHHHhCCCCCCccEEEeCCCc--------chHHHHHHHcCCceEE
Q 012652 95 ELIEEINGRDDEKIDCFISDGFM--------GWSMEVAEKMKLRRAV 133 (459)
Q Consensus 95 ~l~~~l~~~~~~~pDlvi~D~~~--------~~~~~~A~~~giP~i~ 133 (459)
++++. .+.|+||..... ......|-.+|||+++
T Consensus 90 d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 90 KLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp HHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred HHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 44444 899999986533 1356778899999996
No 109
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=68.07 E-value=28 Score=31.53 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
+|||+|+..+..+ +...++|.+.||+|..+.+
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt 33 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYT 33 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEEC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEe
Confidence 6899999877554 3456788889999987766
No 110
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=67.93 E-value=3.8 Score=34.71 Aligned_cols=46 Identities=22% Similarity=0.179 Sum_probs=34.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHHhh
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAK-HGFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~-rGh~Vt~~~~~~~~~~v~~~ 49 (459)
+.||++...++.+ .+-...+.++|++ +|++|.++.++....++...
T Consensus 19 ~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 19 KFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp SEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred CCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 4577777767666 4456999999998 89999999998877766543
No 111
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=67.89 E-value=8.2 Score=35.26 Aligned_cols=39 Identities=8% Similarity=0.138 Sum_probs=32.3
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012652 4 PHILVFS-TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN 42 (459)
Q Consensus 4 ~~il~~~-~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~ 42 (459)
.+|+|++ -++-|=..-...||..|+++|++|.++..+..
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3566555 45669999999999999999999999998763
No 112
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=67.41 E-value=42 Score=29.62 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
+-|+++++..+.| --.++|++|+++|++|.++....
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 3466777755543 34688999999999999987543
No 113
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=66.77 E-value=18 Score=33.44 Aligned_cols=40 Identities=20% Similarity=0.346 Sum_probs=32.7
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012652 4 PHILVFS-TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNH 43 (459)
Q Consensus 4 ~~il~~~-~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 43 (459)
.+|+|++ -++-|=..-...||..|+++|++|.++..+...
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~~ 66 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPAH 66 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTTC
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4555555 456699999999999999999999999987743
No 114
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=66.33 E-value=38 Score=29.81 Aligned_cols=39 Identities=15% Similarity=0.395 Sum_probs=31.1
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFST--PAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~--~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
++|+++++. ++-|=..-...||..|++.|.+|.++-.+.
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 456665543 466888999999999999999999997654
No 115
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=66.28 E-value=53 Score=26.85 Aligned_cols=143 Identities=15% Similarity=0.140 Sum_probs=83.9
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccc
Q 012652 274 KSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIAC 353 (459)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~ 353 (459)
-|.|-+-+||.+ +....++....++..+..+-.-+.. ..-.|+.+.+. +.+. ..-.+++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S------aHR~p~~l~~~----------~~~a---~~~g~~V 71 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS------AHRTPDRMFEY----------AKNA---EERGIEV 71 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC------TTTCHHHHHHH----------HHHT---TTTTCCE
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc------ccCCHHHHHHH----------HHHH---HhCCCcE
Confidence 458888888754 6677888888888888876544432 23455543221 1111 0111334
Q ss_pred eeeccCc----hhHHHhhhcCCceeccccccc--cchhh-hhhhcee--eeeee-eecCCCCcccHHHHHHHHHHHhCCH
Q 012652 354 FLSHCGW----NSTMEGVSNGIPFLCWPYFVD--QFLNE-SYICDIW--KVGLK-LDKDESGIITGEEISNKLVQVLGDQ 423 (459)
Q Consensus 354 ~I~HgG~----~s~~eal~~gvP~v~~P~~~D--Q~~na-~rv~~~~--G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 423 (459)
+|.=+|. .++..++ .-+|+|.+|.... .-..+ .-+.+ + |+.+. +.+ .+..++..++..|. -+.|+
T Consensus 72 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I--d~~~nAa~lAaqIl-a~~d~ 146 (183)
T 1o4v_A 72 IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI--NNAKNAGILAASIL-GIKYP 146 (183)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT--TCHHHHHHHHHHHH-HTTCH
T ss_pred EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec--CCchHHHHHHHHHH-hcCCH
Confidence 7776663 4555555 7799999998542 11111 11223 4 64322 222 24556666666665 45689
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 012652 424 NFKARALELKEITMSSVRE 442 (459)
Q Consensus 424 ~~~~~a~~l~~~~~~~~~~ 442 (459)
+++++.+..++...+.+.+
T Consensus 147 ~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 147 EIARKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999988876543
No 116
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=66.26 E-value=49 Score=26.43 Aligned_cols=139 Identities=9% Similarity=0.095 Sum_probs=79.0
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccce
Q 012652 275 SVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACF 354 (459)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~ 354 (459)
|.|-|-+||.+ +....++....++..+..+-..+.. ..-.|+.+.+ |+...+ ..-.++++
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~s------aHR~p~~~~~----------~~~~a~--~~~~~~Vi 62 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGS------AHKTAEHVVS----------MLKEYE--ALDRPKLY 62 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC------TTTCHHHHHH----------HHHHHH--TSCSCEEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc------ccCCHHHHHH----------HHHHhh--hcCCCcEE
Confidence 35677778654 6667888888888888775544432 2445554321 111111 10023448
Q ss_pred eeccCc----hhHHHhhhcCCceeccccccc---cc-hhh-hhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHH
Q 012652 355 LSHCGW----NSTMEGVSNGIPFLCWPYFVD---QF-LNE-SYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNF 425 (459)
Q Consensus 355 I~HgG~----~s~~eal~~gvP~v~~P~~~D---Q~-~na-~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 425 (459)
|.=+|. .++..++ .-+|+|.+|...- -. .++ -.+ - -|+.+.-- .+..++..+.-.|-. +.|+++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vqm-p-~GvpVatv---~~~~nAa~lA~~Il~-~~d~~l 135 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLRM-P-SGISPALV---LEPKNAALLAARIFS-LYDKEI 135 (159)
T ss_dssp EEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHCC-C-TTCCCEEC---CSHHHHHHHHHHHHT-TTCHHH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHhC-C-CCCceEEe---cCchHHHHHHHHHHh-CCCHHH
Confidence 887774 3555554 6699999996421 11 111 111 1 16554322 245555555554444 358899
Q ss_pred HHHHHHHHHHHHhhh
Q 012652 426 KARALELKEITMSSV 440 (459)
Q Consensus 426 ~~~a~~l~~~~~~~~ 440 (459)
+++.+..++...+.+
T Consensus 136 ~~kl~~~r~~~~~~v 150 (159)
T 3rg8_A 136 ADSVKSYMESNAQKI 150 (159)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998887654
No 117
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=66.23 E-value=42 Score=28.41 Aligned_cols=106 Identities=18% Similarity=0.162 Sum_probs=57.6
Q ss_pred CC--CCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCc-ch---HHHHhhhhccCCCCCCeEEEecCC-CCCCC
Q 012652 1 MS--SPHILVFSTPAQGHVIPLLEFSQCLAK-HGFRVTFVNSEY-NH---KRVMKSLEGKNYLGEQIRLVSIPD-GMEPW 72 (459)
Q Consensus 1 m~--~~~il~~~~~~~gH~~p~~~La~~L~~-rGh~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~~~~~i~~-~~~~~ 72 (459)
|+ ++||+++.++..+.+. +|.++..+ .+++|..+.+.. .. +..++. ++.+..++. .++.
T Consensus 1 ~~~~~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~---------gIp~~~~~~~~~~~- 67 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA---------DIPTHIIPHEEFPS- 67 (215)
T ss_dssp ---CCEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT---------TCCEEECCGGGSSS-
T ss_pred CCCCCcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCccccCc-
Confidence 55 6789988876655444 44444443 368888776532 22 233343 777776542 1110
Q ss_pred CCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEeCcc
Q 012652 73 EERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM-GWSMEVAEKMKLRRAVIWTSC 138 (459)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~-~~~~~~A~~~giP~i~~~~~~ 138 (459)
.. ..-+++++.+++ .+||+++.-.+. .-...+-+.+.-.++-++++.
T Consensus 68 ---------r~-------~~d~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 115 (215)
T 3tqr_A 68 ---------RT-------DFESTLQKTIDH---YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSL 115 (215)
T ss_dssp ---------HH-------HHHHHHHHHHHT---TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred ---------hh-------HhHHHHHHHHHh---cCCCEEEEccchhhCCHHHHhhccCCeEEeCccc
Confidence 00 112345555555 899999987653 234444555666677766653
No 118
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=65.70 E-value=8.8 Score=34.95 Aligned_cols=41 Identities=34% Similarity=0.344 Sum_probs=31.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (459)
++||+|+..++.|- .+|..|.+.||+|+++.... .+.+.+.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 2 SLNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp -CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 37899998777763 57888999999999998765 3666655
No 119
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=65.56 E-value=23 Score=33.54 Aligned_cols=97 Identities=14% Similarity=0.140 Sum_probs=50.0
Q ss_pred CC--CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCCh
Q 012652 1 MS--SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDP 78 (459)
Q Consensus 1 m~--~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 78 (459)
|+ +.|+++++.+ ..+. -+.++.++.|++|+++.+.......... .--.+..++.. .+.
T Consensus 1 M~~~~k~l~Il~~~-~~~~----~i~~aa~~lG~~vv~v~~~~~~~~~~~~--------~~d~~~~~~~~-------~d~ 60 (425)
T 3vot_A 1 MTKRNKNLAIICQN-KHLP----FIFEEAERLGLKVTFFYNSAEDFPGNLP--------AVERCVPLPLF-------EDE 60 (425)
T ss_dssp -CCCCCEEEEECCC-TTCC----HHHHHHHHTTCEEEEEEETTSCCCCSCT--------TEEEEEEECTT-------TCH
T ss_pred CCCCCcEEEEECCC-hhHH----HHHHHHHHCCCEEEEEECCCcccccCHh--------hccEEEecCCC-------CCH
Confidence 76 3567777644 3321 3567888899999998654321100000 01122333211 111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeC--CCcchHHHHHHHcCCce
Q 012652 79 GKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISD--GFMGWSMEVAEKMKLRR 131 (459)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D--~~~~~~~~~A~~~giP~ 131 (459)
. .+. ..+.++.+. .++|.|+.- .....+..+|+.+|+|.
T Consensus 61 ~----~~~----~~~~~~~~~------~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 61 E----AAM----DVVRQTFVE------FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp H----HHH----HHHHHHHHH------SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred H----HHH----HHHHHhhhh------cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1 111 224445555 789999853 22235667789999983
No 120
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=65.04 E-value=12 Score=31.61 Aligned_cols=42 Identities=17% Similarity=0.094 Sum_probs=36.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHK 44 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 44 (459)
+.+|++.+.++..|-....-++..|..+|++|.++...-..+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~ 129 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPG 129 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 458999999999999999999999999999999988754333
No 121
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=64.76 E-value=3.9 Score=35.18 Aligned_cols=33 Identities=9% Similarity=0.012 Sum_probs=24.9
Q ss_pred CccEEE-eCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 107 KIDCFI-SDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 107 ~pDlvi-~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
.||+|| .|+..- -+..=|.++|||+|.+..+.+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn~ 191 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTNC 191 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCCC
Confidence 699985 565433 566679999999999876655
No 122
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=64.55 E-value=27 Score=34.26 Aligned_cols=26 Identities=8% Similarity=0.195 Sum_probs=21.4
Q ss_pred CCccEEEeCCCcchHHHHHHHc-------CCceEEE
Q 012652 106 EKIDCFISDGFMGWSMEVAEKM-------KLRRAVI 134 (459)
Q Consensus 106 ~~pDlvi~D~~~~~~~~~A~~~-------giP~i~~ 134 (459)
.+||++|.+.. +..+|+++ |||++.+
T Consensus 433 ~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 433 RQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred cCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 68999999863 47778888 9999864
No 123
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=64.48 E-value=10 Score=34.42 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=31.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (459)
+||+|+..++.|- .+|..|.+.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 6899998888874 46889999999999998765 4556554
No 124
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=64.47 E-value=21 Score=34.31 Aligned_cols=33 Identities=18% Similarity=0.318 Sum_probs=25.9
Q ss_pred HHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEE
Q 012652 93 LEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVI 134 (459)
Q Consensus 93 ~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~ 134 (459)
++++++. .+||++|.+.. ...+|+++|||++.+
T Consensus 377 l~~~i~~------~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 377 VHQWIKN------EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHH------SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHh------cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 4455555 89999998863 577899999999974
No 125
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=62.97 E-value=11 Score=28.53 Aligned_cols=45 Identities=16% Similarity=0.123 Sum_probs=33.3
Q ss_pred CC-CCEEEEEcCCCc-cCH-HHHHHHHHHHHhCC--CEEEEEeCCcchHH
Q 012652 1 MS-SPHILVFSTPAQ-GHV-IPLLEFSQCLAKHG--FRVTFVNSEYNHKR 45 (459)
Q Consensus 1 m~-~~~il~~~~~~~-gH~-~p~~~La~~L~~rG--h~Vt~~~~~~~~~~ 45 (459)
|+ ++|++|+-+... -.. +-.+..|....++| |+|.++........
T Consensus 4 ~~~~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~L 53 (117)
T 2fb6_A 4 MSANDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVKL 53 (117)
T ss_dssp SSTTSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHHH
T ss_pred cccCCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeeee
Confidence 55 678887776654 222 44778899999999 89999998776663
No 126
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=62.91 E-value=68 Score=26.99 Aligned_cols=103 Identities=11% Similarity=0.142 Sum_probs=57.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCC-cch---HHHHhhhhccCCCCCCeEEEecCC-CCCCCCCCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSE-YNH---KRVMKSLEGKNYLGEQIRLVSIPD-GMEPWEERT 76 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~-~~~---~~v~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~ 76 (459)
+||+++..+..+ .+..+.++|.+. +|+|..+.+. ... +..++. ++.+..++. .+.
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~---------gIp~~~~~~~~~~------ 65 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE---------NVPAFVFSPKDYP------ 65 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT---------TCCEEECCGGGSS------
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc---------CCCEEEeCccccc------
Confidence 578777666543 366677888876 7899766644 222 223333 677665432 111
Q ss_pred ChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEeCcc
Q 012652 77 DPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM-GWSMEVAEKMKLRRAVIWTSC 138 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~-~~~~~~A~~~giP~i~~~~~~ 138 (459)
+ .+. .++.+.+.++. .+||+++.-.+. .-...+-..+.-.++-++++.
T Consensus 66 ~----~~~----~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 114 (212)
T 3av3_A 66 S----KAA----FESEILRELKG------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSL 114 (212)
T ss_dssp S----HHH----HHHHHHHHHHH------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESSC
T ss_pred c----hhh----hHHHHHHHHHh------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecCc
Confidence 0 001 12223344444 899999987653 234444555666677766653
No 127
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=61.88 E-value=13 Score=27.60 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|++.||+++|..+-|--.-.-.+-+.+.++|.++.+...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 777799999977665555555888888899988776543
No 128
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=61.63 E-value=1.1e+02 Score=28.89 Aligned_cols=140 Identities=12% Similarity=0.063 Sum_probs=80.6
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCC-Cc
Q 012652 273 PKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHP-SI 351 (459)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~-~~ 351 (459)
..+.|-|-+||.+ +....+++...++..|..+-.-+.+ ..-.|+...+ ++-+.+- ... ++
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~s------aHR~p~~~~~----------~~~~~~~-~g~~~v 324 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTS------AHKGPDETLR----------IKAEYEG-DGIPTV 324 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTCHHHHHH----------HHHHHHT-TCCCEE
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeee------ccCCHHHHHH----------HHHHHHH-CCCCeE
Confidence 3467888888754 6677888888888888876544432 2445554221 1111110 112 24
Q ss_pred cceeeccCc----hhHHHhhhcCCceeccccccccchhh--hh--hhc-eeeeeeeeecCCCCcccHHHHHHHHHHHhCC
Q 012652 352 ACFLSHCGW----NSTMEGVSNGIPFLCWPYFVDQFLNE--SY--ICD-IWKVGLKLDKDESGIITGEEISNKLVQVLGD 422 (459)
Q Consensus 352 ~~~I~HgG~----~s~~eal~~gvP~v~~P~~~DQ~~na--~r--v~~-~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 422 (459)
+|.=+|. .++..++ .-+|+|.+|... ..++ .. +.+ -.|+.+..- ....++..++..|. -+.|
T Consensus 325 --iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~--~~~G~daLls~vqmp~g~pvatv---~~~~nAa~~A~~Il-~~~~ 395 (425)
T 2h31_A 325 --FVAVAGRSNGLGPVMSGN-TAYPVISCPPLT--PDWGVQDVWSSLRLPSGLGCSTV---LSPEGSAQFAAQIF-GLSN 395 (425)
T ss_dssp --EEEECCSSCCHHHHHHHH-CSSCEEECCCCC--TTTHHHHGGGTSSCCSSCCCEEC---CCHHHHHHHHHHHH-HTTC
T ss_pred --EEEEcCcccchHhHHhcc-CCCCEEEeeCcc--ccccHHHHHHHhcCCCCCceEEe---cCchHHHHHHHHHH-ccCC
Confidence 7776664 3555555 489999999842 2221 11 111 025554332 13455566665555 4578
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 012652 423 QNFKARALELKEITMSSV 440 (459)
Q Consensus 423 ~~~~~~a~~l~~~~~~~~ 440 (459)
+.++++.+..+......+
T Consensus 396 ~~l~~kl~~~~~~~~~~v 413 (425)
T 2h31_A 396 HLVWSKLRASILNTWISL 413 (425)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999998888877654
No 129
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=61.58 E-value=38 Score=32.70 Aligned_cols=102 Identities=14% Similarity=0.226 Sum_probs=57.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecC--CCCCCC----CCCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIP--DGMEPW----EERT 76 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~--~~~~~~----~~~~ 76 (459)
++|-+|++. ++=.-++.+|+.|.+.|.++. ++......+++. |+.+..+. .++|+. ...-
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~vTgfPEil~GRVKTL 74 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQLTGFPEVLDGRVKTL 74 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHHHHSCCCCTTTTSSSC
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccccCCCchhhCCccccC
Confidence 344455554 345558899999999998875 566788888877 67766653 233333 2222
Q ss_pred ChHHHHHHHHHh--ccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHH
Q 012652 77 DPGKLIEKVLQV--MPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVA 124 (459)
Q Consensus 77 ~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A 124 (459)
.+ +.....+.. .+...++ +++..- ...|+|+++ +++.-..++
T Consensus 75 HP-~ihgGiLa~r~~~~h~~~-l~~~~i---~~iDlVvvN-LYPF~~tv~ 118 (523)
T 3zzm_A 75 HP-RVHAGLLADLRKSEHAAA-LEQLGI---EAFELVVVN-LYPFSQTVE 118 (523)
T ss_dssp SH-HHHHHHHCCTTSHHHHHH-HHHHTC---CCCSEEEEE-CCCHHHHHH
T ss_pred Cc-hhhhhhccCCCCHHHHHH-HHHCCC---CceeEEEEe-CCChHHHHh
Confidence 22 223333321 1222333 333333 789999999 455444444
No 130
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=61.57 E-value=8.6 Score=34.09 Aligned_cols=35 Identities=31% Similarity=0.387 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++||++.. + |. --..|+++|.++||+|+.++..
T Consensus 1 M~~~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC--C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 7778888884 4 63 3457899999999999999764
No 131
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=61.30 E-value=31 Score=33.00 Aligned_cols=40 Identities=18% Similarity=0.356 Sum_probs=33.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHK 44 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~ 44 (459)
.|+++..++.|=..-+..||..|+++|++|.++..+.+..
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 4556677788999999999999999999999999776543
No 132
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=60.59 E-value=8.1 Score=36.16 Aligned_cols=40 Identities=10% Similarity=0.177 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQG-H---VIPLLEFSQCL-AKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~g-H---~~p~~~La~~L-~~rGh~Vt~~~~~ 40 (459)
|+|+||+++..+-.+ | +.....++++| .++||+|+.+...
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 788999988766444 3 34578899999 9999999999643
No 133
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=60.39 E-value=13 Score=35.68 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=34.7
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012652 6 ILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRV 46 (459)
Q Consensus 6 il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v 46 (459)
+++...|+.|=..-++.+|...+.+|..|.|++.+...+.+
T Consensus 200 iiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 200 VLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 56777889999999999999999899999999987655443
No 134
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=59.91 E-value=12 Score=32.16 Aligned_cols=39 Identities=18% Similarity=0.276 Sum_probs=34.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
+.||++..-|+.|=..-++.+|.+|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 568888889999999999999999999999999887754
No 135
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=59.73 E-value=12 Score=31.02 Aligned_cols=41 Identities=24% Similarity=0.355 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHH-HHHHHHhCCCEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLE-FSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~-La~~L~~rGh~Vt~~~~~~ 41 (459)
|+++||+++-....|+..-+.. +++.|.+.|++|.++....
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 6667998777666787665544 5667777899998886533
No 136
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=59.31 E-value=14 Score=30.48 Aligned_cols=36 Identities=25% Similarity=0.374 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+.++|+++. +.|.+ -..|+++|.++||+|+.++..
T Consensus 1 M~~~~ilVtG--atG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIFG--ATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEEc--CCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 6667777764 33433 467899999999999998864
No 137
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=59.30 E-value=16 Score=32.05 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+.+|++.+.++..|-....-++..|..+|++|.+++..
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 56899999999999999999999999999999988753
No 138
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=59.04 E-value=8.4 Score=35.09 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN 42 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~ 42 (459)
=++||+++..+ ....+++++.++||+|.++.....
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 05799998876 567899999999999999887543
No 139
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=59.02 E-value=52 Score=29.40 Aligned_cols=39 Identities=18% Similarity=0.419 Sum_probs=30.8
Q ss_pred CCEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFST--PAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~--~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
++|+++++. ++-|=..-...||..|++.|.+|.++-.+.
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 345654443 466889999999999999999999997654
No 140
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=59.01 E-value=16 Score=31.75 Aligned_cols=41 Identities=32% Similarity=0.489 Sum_probs=28.7
Q ss_pred CCCCEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQG-----------HVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~g-----------H~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|.+.||||+.....+ ...=+....+.|.+.|++|+++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 777799987765321 23456667888999999999999753
No 141
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=58.80 E-value=35 Score=33.08 Aligned_cols=33 Identities=27% Similarity=0.268 Sum_probs=25.4
Q ss_pred HHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEE
Q 012652 93 LEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVI 134 (459)
Q Consensus 93 ~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~ 134 (459)
+.++++. .+||++|... ....+|+++|||++.+
T Consensus 393 l~~~i~~------~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 393 LLKTVDE------YQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHH------TTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHh------cCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 4455555 8999999975 4567899999999854
No 142
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=58.04 E-value=10 Score=29.13 Aligned_cols=34 Identities=15% Similarity=0.375 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+.+||+++.. |.+- ..+|+.|.++||+|+++...
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 3578888843 5443 46789999999999998764
No 143
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=57.83 E-value=7.9 Score=35.74 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++||+|+..+..| ..+|..|.+.||+|+++...
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 567899999776555 34788899999999988653
No 144
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=57.82 E-value=42 Score=28.42 Aligned_cols=103 Identities=13% Similarity=0.092 Sum_probs=0.0
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCc----chHHHHhhhhccCCCCCCeEEEecCCCCCCCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHG--FRVTFVNSEY----NHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWE 73 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rG--h~Vt~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~ 73 (459)
|+ +.||+++.++..+- +.+|.+++.+.+ ++|..+.+.. ..+..++. ++.+..++..--..
T Consensus 5 ~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~---------gIp~~~~~~~~~~~- 71 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY---------GIPTFVVKRKPLDI- 71 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCBTTBCH-
T ss_pred CCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCcccCCh-
Q ss_pred CCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 74 ERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
+++++.+++ .+||+++.-.+.. -...+-+.+.-.++-++++..
T Consensus 72 --------------------~~~~~~L~~---~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSLL 115 (215)
T 3kcq_A 72 --------------------EHISTVLRE---HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLL 115 (215)
T ss_dssp --------------------HHHHHHHHH---TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCT
T ss_pred --------------------HHHHHHHHH---hCCCEEEEeCCceEeCHHHHhhccCCeEEECcccc
No 145
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=57.72 E-value=56 Score=28.29 Aligned_cols=33 Identities=12% Similarity=0.196 Sum_probs=25.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|.++++.++.| --.++|++|++.|++|.+....
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56677766664 4578999999999999987654
No 146
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=57.01 E-value=47 Score=29.56 Aligned_cols=80 Identities=8% Similarity=0.111 Sum_probs=53.5
Q ss_pred CCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccE
Q 012652 31 GFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDC 110 (459)
Q Consensus 31 Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDl 110 (459)
..+..+++.+.+.-+.+.+ |++...+.. ..++ .....+.+.++++.+++ .+..+
T Consensus 178 ~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~-~~~~-------------~eps~~~l~~l~~~ik~---~~v~~ 231 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLAKRF---------GLKQLGISG-ISPE-------------QEPSPRQLKEIQDFVKE---YNVKT 231 (286)
T ss_dssp SCCEEEEEESCCHHHHHHT---------TCEEEEEEC-SCC----------------CCHHHHHHHHHHHHH---TTCCE
T ss_pred CCCEEEEECCchHHHHHHC---------CCeEeeccc-cCCC-------------CCCCHHHHHHHHHHHHH---cCCCE
Confidence 3445556677788777777 777665432 1111 12234566777777776 89999
Q ss_pred EEeCCCcc--hHHHHHHHcCCceEEEeC
Q 012652 111 FISDGFMG--WSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 111 vi~D~~~~--~~~~~A~~~giP~i~~~~ 136 (459)
|+++.... .+-.+|+..|++++.+.+
T Consensus 232 if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 232 IFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp EEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred EEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 99998766 567889999999987543
No 147
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=56.70 E-value=66 Score=28.53 Aligned_cols=40 Identities=13% Similarity=0.379 Sum_probs=31.1
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012652 3 SPHILVFS--TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN 42 (459)
Q Consensus 3 ~~~il~~~--~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~ 42 (459)
+.|++.++ -++-|=..-...||..|++.|.+|.++-.+..
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 34555444 34668899999999999999999999976543
No 148
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=56.66 E-value=60 Score=28.26 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=27.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
-|+++++.++.| --.++|+.|+++|.+|.+...
T Consensus 9 gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 9 GKTALVTGSARG---LGFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 489999977775 457899999999999988654
No 149
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=56.64 E-value=84 Score=26.79 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|-+.|.++++.++.| --.++|++|.++|++|.++..
T Consensus 1 Ml~~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 1 MKMTKSALVTGASRG---IGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CCCSCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 444566777755442 346889999999999988765
No 150
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=56.45 E-value=41 Score=32.19 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
.|||++.. |. -...+++++++.|++|.++.+..
T Consensus 7 k~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~~ 39 (461)
T 2dzd_A 7 RKVLVANR---GE--IAIRVFRACTELGIRTVAIYSKE 39 (461)
T ss_dssp SEEEECSC---HH--HHHHHHHHHHHHTCEEEEEECGG
T ss_pred cEEEEECC---cH--HHHHHHHHHHHcCCEEEEEECCc
Confidence 37887742 32 35789999999999999887643
No 151
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=56.35 E-value=73 Score=28.67 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=55.9
Q ss_pred HHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCC
Q 012652 27 LAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIEKVLQVMPGKLEELIEEINGRDDE 106 (459)
Q Consensus 27 L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 106 (459)
|.....+..+++.+.+.-+.+.+ |++...+.. ..++. ....+.+.++++.+++ .
T Consensus 185 l~~~~~~~~v~~H~af~Yfa~~y---------Gl~~~~~~~-~~~~~-------------eps~~~l~~l~~~ik~---~ 238 (312)
T 2o1e_A 185 AKKAEKKEFITQHTAFGYLAKEY---------GLKQVPIAG-LSPDQ-------------EPSAASLAKLKTYAKE---H 238 (312)
T ss_dssp HHSCSCCEEEESSCTTHHHHHHT---------TCEEEECSS-CCSSS-------------CCCHHHHHHHHHHTTS---S
T ss_pred hhccCCCEEEEECCchHHHHHHC---------CCeEEEeec-cCCCC-------------CCCHHHHHHHHHHHHH---c
Confidence 33333445555667777777766 777765532 21111 1245667888888888 8
Q ss_pred CccEEEeCCCcc--hHHHHHHHcCCceEEEe
Q 012652 107 KIDCFISDGFMG--WSMEVAEKMKLRRAVIW 135 (459)
Q Consensus 107 ~pDlvi~D~~~~--~~~~~A~~~giP~i~~~ 135 (459)
+..+|+++.... .+-.+|+..|++.+.+.
T Consensus 239 ~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~ 269 (312)
T 2o1e_A 239 NVKVIYFEEIASSKVADTLASEIGAKTEVLN 269 (312)
T ss_dssp CCCEEECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHhCCcEEEec
Confidence 899999998876 47788999999987654
No 152
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=56.23 E-value=11 Score=33.79 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++||+|+..+..| ..+|..|.++||+|+++...
T Consensus 1 ~~~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 346799998766555 46789999999999998753
No 153
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=55.96 E-value=81 Score=28.80 Aligned_cols=98 Identities=12% Similarity=0.151 Sum_probs=57.7
Q ss_pred EEEEEcCCCcc--C--HHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHH
Q 012652 5 HILVFSTPAQG--H--VIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGK 80 (459)
Q Consensus 5 ~il~~~~~~~g--H--~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (459)
-|++.|..+.. . ...+..|++.|.++|++|.++..+...+..++.... .+-....+.
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~-----~~~~~~~l~-------------- 247 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQ-----METKPIVAT-------------- 247 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHT-----CSSCCEECT--------------
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHh-----cccccEEee--------------
Confidence 45666655432 2 346889999999889999987776655554432110 000001100
Q ss_pred HHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeC
Q 012652 81 LIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~ 136 (459)
..-.+.++...+. +-|++|+.- .....+|..+|+|++.+..
T Consensus 248 --------g~~sl~e~~ali~-----~a~~~i~~D--sG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 248 --------GKFQLGPLAAAMN-----RCNLLITND--SGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp --------TCCCHHHHHHHHH-----TCSEEEEES--SHHHHHHHTTTCCEEEECS
T ss_pred --------CCCCHHHHHHHHH-----hCCEEEECC--CCHHHHHHhcCCCEEEEEC
Confidence 0112334444442 378998753 3567889999999998754
No 154
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=55.77 E-value=13 Score=32.58 Aligned_cols=42 Identities=17% Similarity=0.162 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012652 1 MSSPHILVFSTP---AQGHVIPLLEFSQCLAKHGFRVTFVNSEYN 42 (459)
Q Consensus 1 m~~~~il~~~~~---~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~ 42 (459)
|..+|.+|++.+ +-|-=.-..+|+..|+.||++||..=.+++
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 567899999965 336666788999999999999999876554
No 155
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=55.51 E-value=35 Score=32.54 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=32.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcch
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKH-GFRVTFVNSEYNH 43 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~ 43 (459)
.|+|+..++.|=..-+..||..|+++ |++|.++..+.+.
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 45566667779999999999999999 9999999887543
No 156
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=55.32 E-value=1e+02 Score=27.78 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+|||+|+..+..+ +...++|.+.||+|..+.+.
T Consensus 4 mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 4 MIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp TSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECC
T ss_pred ceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 6899999877543 34567788889999877653
No 157
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=55.16 E-value=7.7 Score=35.72 Aligned_cols=40 Identities=8% Similarity=0.173 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCCCccCH----HHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHV----IPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~----~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+|+||+++..+..+-. .....++++|.+.||+|..+...
T Consensus 1 m~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 77889998875433322 25677899999999999998753
No 158
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=54.95 E-value=22 Score=30.12 Aligned_cols=41 Identities=15% Similarity=0.180 Sum_probs=36.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNH 43 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 43 (459)
+.||++.+.++..|-....-++..|..+|++|.+++..--.
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~ 132 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLN 132 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCH
Confidence 46899999999999999999999999999999999865433
No 159
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=54.71 E-value=84 Score=25.42 Aligned_cols=146 Identities=18% Similarity=0.188 Sum_probs=79.6
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccce
Q 012652 275 SVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACF 354 (459)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~ 354 (459)
+.|-|-+||.+ +....++....++..+..+-..+.. ..-.|+.+.+. +-. .....+++|
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~S------aHR~p~~~~~~----------~~~---a~~~g~~Vi 71 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVS------AHRTPDRLFSF----------AEQ---AEANGLHVI 71 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTCHHHHHHH----------HHH---TTTTTCSEE
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc------ccCCHHHHHHH----------HHH---HHhCCCcEE
Confidence 45777778654 6677888888888888876554433 24455543221 111 011123348
Q ss_pred eeccCc----hhHHHhhhcCCceeccccccccc-hhhhh--hhc-eeeeeee-eecCCCCcccHHHHHHHHHHHhCCHHH
Q 012652 355 LSHCGW----NSTMEGVSNGIPFLCWPYFVDQF-LNESY--ICD-IWKVGLK-LDKDESGIITGEEISNKLVQVLGDQNF 425 (459)
Q Consensus 355 I~HgG~----~s~~eal~~gvP~v~~P~~~DQ~-~na~r--v~~-~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~~~ 425 (459)
|.=+|. .++..++ .-+|+|.+|...... ..... +.+ --|+.+. +.+++.+..++..+.-.|-. +.|+++
T Consensus 72 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d~~l 149 (174)
T 3kuu_A 72 IAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-LHDTEL 149 (174)
T ss_dssp EEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTCHHH
T ss_pred EEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHc-CCCHHH
Confidence 877764 3444443 468999999753211 11111 111 0254222 22210022344444444443 468999
Q ss_pred HHHHHHHHHHHHhhhhcC
Q 012652 426 KARALELKEITMSSVREG 443 (459)
Q Consensus 426 ~~~a~~l~~~~~~~~~~~ 443 (459)
+++.+.+++..++.+.+.
T Consensus 150 ~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 150 AGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999998876543
No 160
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=54.22 E-value=99 Score=26.49 Aligned_cols=35 Identities=14% Similarity=0.049 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+.|+++++.++.| --.++|++|.++|++|.++...
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3466777755543 3578999999999999998754
No 161
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=54.03 E-value=45 Score=28.46 Aligned_cols=40 Identities=15% Similarity=0.307 Sum_probs=33.5
Q ss_pred cHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEe
Q 012652 90 PGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIW 135 (459)
Q Consensus 90 ~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~ 135 (459)
....++.++.+++ .++|+||.|. .+..+|+++|+|.+.+.
T Consensus 140 ~ee~~~~i~~l~~---~G~~vVVG~~---~~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 140 EEDARGQINELKA---NGTEAVVGAG---LITDLAEEAGMTGIFIY 179 (225)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEESH---HHHHHHHHTTSEEEESS
T ss_pred HHHHHHHHHHHHH---CCCCEEECCH---HHHHHHHHcCCcEEEEC
Confidence 4567788888888 8999999985 45888999999999877
No 162
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=53.96 E-value=13 Score=33.73 Aligned_cols=42 Identities=14% Similarity=0.273 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKS 49 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~ 49 (459)
++||+|+..++.| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 5789999877766 45788999999999999443344555554
No 163
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=53.78 E-value=14 Score=33.44 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc-chHHHHhh
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY-NHKRVMKS 49 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~-~~~~v~~~ 49 (459)
+|||+|+..++.|- .+|..|. .||+|+++.... ..+.+.+.
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 47999998887774 5688888 999999998764 34556555
No 164
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=53.20 E-value=73 Score=27.68 Aligned_cols=35 Identities=11% Similarity=0.063 Sum_probs=28.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+-|+++++.++.| --.++|++|+++|.+|.++...
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 5578888877765 4678999999999999887653
No 165
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=53.10 E-value=11 Score=34.08 Aligned_cols=36 Identities=17% Similarity=0.153 Sum_probs=28.3
Q ss_pred EEEEcCCCccCHH--------------HHHHHHHHHHhCCCEEEEEeCCc
Q 012652 6 ILVFSTPAQGHVI--------------PLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 6 il~~~~~~~gH~~--------------p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|++.+.|+.=.+. ...++|+++.++|++|++++.+.
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 6666666655552 67789999999999999998754
No 166
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=52.87 E-value=39 Score=33.18 Aligned_cols=34 Identities=21% Similarity=0.152 Sum_probs=26.0
Q ss_pred HHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEE
Q 012652 92 KLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVI 134 (459)
Q Consensus 92 ~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~ 134 (459)
.++++++. .+||++|... ....+|+++|||++.+
T Consensus 447 el~~~i~~------~~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 447 DMEVVLEK------LKPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHH------HCCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHh------cCCCEEEccc---chhHHHHhcCCCEEEe
Confidence 34555665 7999999874 3578899999999853
No 167
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=52.77 E-value=26 Score=30.24 Aligned_cols=41 Identities=27% Similarity=0.334 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQ-----------GHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~-----------gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|.+.||||+..... -...=+....+.|.+.|++|+++++..
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 66568998875422 244566777888999999999999754
No 168
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=52.36 E-value=11 Score=33.17 Aligned_cols=53 Identities=13% Similarity=0.092 Sum_probs=37.4
Q ss_pred CCCccceeeccCchhHHHhhhc---CCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCC
Q 012652 348 HPSIACFLSHCGWNSTMEGVSN---GIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGD 422 (459)
Q Consensus 348 ~~~~~~~I~HgG~~s~~eal~~---gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 422 (459)
.+|+ +|+-||-||+.+++.. ++|++.++.. . +|.- ..+.++++.++++.+++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl--------~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFL--------TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSS--------CCBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCcc--------CcCCHHHHHHHHHHHHcC
Confidence 4556 9999999999999876 7888877321 1 1111 234578888888888764
No 169
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=52.04 E-value=49 Score=32.09 Aligned_cols=33 Identities=21% Similarity=0.106 Sum_probs=25.9
Q ss_pred HHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEE
Q 012652 93 LEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVI 134 (459)
Q Consensus 93 ~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~ 134 (459)
++++++. .+||++|... ....+|+++|||++.+
T Consensus 409 l~~~i~~------~~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 409 FEEFVKR------IKPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHH------HCCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHh------cCCcEEEeCc---chhHHHHHcCCCEEec
Confidence 4455555 7899999974 4578899999999963
No 170
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=52.03 E-value=31 Score=33.13 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=26.4
Q ss_pred HHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEE
Q 012652 93 LEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVI 134 (459)
Q Consensus 93 ~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~ 134 (459)
++++++. .+||++|.+.. ...+|+++|||++.+
T Consensus 367 le~~i~~------~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARA------GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHH------HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHh------cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 4566666 78999999854 577899999999964
No 171
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=51.35 E-value=17 Score=31.76 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=63.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHH
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLI 82 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 82 (459)
+||||+.---+. |.--+..|++.|.+ +|+|+++.+...++..-... .....+++.....+. ...+.....
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~---~~v~GTPaD- 80 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSL----TLNAPLHIKNLENGM---ISVEGTPTD- 80 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCC----CCSSCEEEEECTTSC---EEESSCHHH-
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccce----ecCCCeEEEEecCCe---EEECCCHHH-
Confidence 588888775554 55567888999976 89999999987765543221 222345555543211 000111111
Q ss_pred HHHHHhccHHHHHHHHHHhCCCCCCccEEEeC----------CCcchHHHH---HHHcCCceEEEeC
Q 012652 83 EKVLQVMPGKLEELIEEINGRDDEKIDCFISD----------GFMGWSMEV---AEKMKLRRAVIWT 136 (459)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D----------~~~~~~~~~---A~~~giP~i~~~~ 136 (459)
++.--+..+-. .+||+||+. .+++.+..+ |..+|||.|.++.
T Consensus 81 ---------CV~lal~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 81 ---------CVHLAITGVLP---EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp ---------HHHHHTTTTSS---SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred ---------HHHHHHHHhcC---CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 12222222222 689999963 334433333 3557999999864
No 172
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=50.66 E-value=11 Score=29.33 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
+.||+++.. |.+ ...+|+.|.++||+|+++....
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 347888765 433 4678999999999999987643
No 173
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=50.35 E-value=37 Score=31.36 Aligned_cols=26 Identities=23% Similarity=0.496 Sum_probs=20.7
Q ss_pred CCCccceeeccCchhH---HHhhhcCCceec
Q 012652 348 HPSIACFLSHCGWNST---MEGVSNGIPFLC 375 (459)
Q Consensus 348 ~~~~~~~I~HgG~~s~---~eal~~gvP~v~ 375 (459)
++|+ +|++||+-+. ..|-..|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 4666 9999998764 567788999986
No 174
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=50.13 E-value=21 Score=28.18 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=25.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
..+|+++.. |.+- ..+++.|.++|++|+++....
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 468888864 4332 567899999999999987643
No 175
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=49.52 E-value=56 Score=27.84 Aligned_cols=35 Identities=9% Similarity=0.050 Sum_probs=20.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
++||++...-.=-...+-.....|+++|++|++++
T Consensus 2 ~~vL~v~aHPDDe~l~~ggtia~~~~~G~~v~vv~ 36 (227)
T 1uan_A 2 LDLLVVAPHPDDGELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ceEEEEEeCCCcHHHhHHHHHHHHHhCCCcEEEEE
Confidence 45664443322223344445556668999988875
No 176
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=49.44 E-value=34 Score=27.59 Aligned_cols=45 Identities=11% Similarity=0.175 Sum_probs=31.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCCcchHHH
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHG--FRVTFVNSEYNHKRV 46 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rG--h~Vt~~~~~~~~~~v 46 (459)
|.+.+|.+++ ++.|++--+-..++.|.+-| |+|.+++....-+.+
T Consensus 4 m~~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~ 50 (169)
T 3trh_A 4 MNKIFVAILM-GSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKET 50 (169)
T ss_dssp --CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHH
T ss_pred CCCCcEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHH
Confidence 5666777776 77888888888888888877 666666655544443
No 177
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=49.33 E-value=8.6 Score=35.74 Aligned_cols=40 Identities=10% Similarity=0.174 Sum_probs=28.4
Q ss_pred CCCCEEEEEcCCCccCH----HHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHV----IPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~----~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+|+||+++..+..+-. .....++++|.++||+|..+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 78889998885433322 34578899999999999998743
No 178
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=49.22 E-value=14 Score=32.81 Aligned_cols=52 Identities=13% Similarity=0.074 Sum_probs=35.7
Q ss_pred CCccceeeccCchhHHHhhhc------CCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCC
Q 012652 349 PSIACFLSHCGWNSTMEGVSN------GIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGD 422 (459)
Q Consensus 349 ~~~~~~I~HgG~~s~~eal~~------gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 422 (459)
+|+ +|+=||-||+.+++.. ++|++.+|.. . +|. + ..+.++++.+++.++++.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lgf---l-----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LGF---Y-----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CCS---S-----CCBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CCc---C-----CcCCHHHHHHHHHHHHcC
Confidence 455 9999999999998765 8898888541 0 121 1 233567788888887754
No 179
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=49.18 E-value=28 Score=29.53 Aligned_cols=29 Identities=24% Similarity=0.217 Sum_probs=21.0
Q ss_pred CCCCEEEEEcCCCc-c-CHHHHHHHHHHHHh
Q 012652 1 MSSPHILVFSTPAQ-G-HVIPLLEFSQCLAK 29 (459)
Q Consensus 1 m~~~~il~~~~~~~-g-H~~p~~~La~~L~~ 29 (459)
|+++|||+..|.-. | -+||...++++|..
T Consensus 1 ~~~m~VLvTGF~PF~~~~~NPS~~~v~~L~~ 31 (215)
T 3giu_A 1 SNAMHILVTGFAPFDNQNINPSWEAVTQLED 31 (215)
T ss_dssp ---CEEEEEEECCCTTCSCCHHHHHHHHSCS
T ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 46889998887644 3 47999999999965
No 180
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=49.14 E-value=18 Score=32.20 Aligned_cols=41 Identities=15% Similarity=0.300 Sum_probs=31.0
Q ss_pred CCCCEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 1 MSSPHILVFS--TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~--~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|+++|++.+. -++.|=..-...||..|+++|++|.++-.+.
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 6666666554 3466889999999999999999999997665
No 181
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=48.33 E-value=35 Score=26.44 Aligned_cols=63 Identities=5% Similarity=-0.079 Sum_probs=40.6
Q ss_pred cCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Q 012652 369 NGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEITM 437 (459)
Q Consensus 369 ~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~~~ 437 (459)
..+|+|++--..+.. ......+ .|+--.+. ..++.++|.++|++++....+++..+++++.+.
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~~~-~g~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQAIQ-DGAYDFIA----KPFAADRLVQSARRAEEKRRLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHHHh-cCCCeEEe----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888886554433 3333444 47766665 578999999999999976655554444444443
No 182
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=48.19 E-value=21 Score=32.28 Aligned_cols=35 Identities=23% Similarity=0.349 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKH-G-FRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~r-G-h~Vt~~~~~~ 41 (459)
|+++||+++..+.. .++++.|++. | ++|..+....
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 78899999865554 4789999875 7 8988886643
No 183
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=48.16 E-value=36 Score=27.03 Aligned_cols=94 Identities=14% Similarity=0.072 Sum_probs=60.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh-hhhccCCCCCCeEEEecCCCCCCCCCCCChHH
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEYNHKRVMK-SLEGKNYLGEQIRLVSIPDGMEPWEERTDPGK 80 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (459)
.+|++.. ...+=.-++.+|++|.+. ||++. .+......+++ . |+.+..+..+ +.+
T Consensus 12 g~V~lsv--~D~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~~---------Gl~v~~v~k~-~eG-------- 69 (152)
T 1b93_A 12 KHIALVA--HDHCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRAT---------GMNVNAMLSG-PMG-------- 69 (152)
T ss_dssp CEEEEEE--CGGGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHHH---------CCCCEEECCG-GGT--------
T ss_pred CEEEEEE--ehhhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHHh---------CceeEEEEec-CCC--------
Confidence 3444443 345567789999999998 99654 45567777777 5 5655544321 000
Q ss_pred HHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCC--cc--------hHHHHHHHcCCceEE
Q 012652 81 LIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGF--MG--------WSMEVAEKMKLRRAV 133 (459)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~--~~--------~~~~~A~~~giP~i~ 133 (459)
.++.+.++++. .+.|+||.-.- .. ....+|-.++||+++
T Consensus 70 --------G~p~I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 70 --------GDQQVGALISE------GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp --------HHHHHHHHHHT------TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred --------CCchHHHHHHC------CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 23445555555 99999986443 11 256788999999996
No 184
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=48.05 E-value=1.1e+02 Score=25.86 Aligned_cols=43 Identities=16% Similarity=0.135 Sum_probs=32.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHH-HHhCCCEEEEEeCCcchHHHH
Q 012652 5 HILVFSTPAQGHVIPLLEFSQC-LAKHGFRVTFVNSEYNHKRVM 47 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~-L~~rGh~Vt~~~~~~~~~~v~ 47 (459)
-+++...|+.|=..-++.+|.. +.+.|..|.+++.+...+.+.
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~ 75 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLR 75 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHH
Confidence 3567778888999999998765 456689999999876655543
No 185
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=47.82 E-value=31 Score=25.49 Aligned_cols=41 Identities=15% Similarity=0.150 Sum_probs=26.6
Q ss_pred HHHHHhCCCCCCccEEEeCCCcc--hHHHHHHHc-------CCceEEEeCcch
Q 012652 96 LIEEINGRDDEKIDCFISDGFMG--WSMEVAEKM-------KLRRAVIWTSCA 139 (459)
Q Consensus 96 l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~~~-------giP~i~~~~~~~ 139 (459)
.++.+.. .+||+||.|...+ .+..+.+.+ ++|.+.++....
T Consensus 38 al~~l~~---~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 38 ALEKLSE---FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp HHHHHTT---BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred HHHHHHh---cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 3444444 7899999997755 355555443 588888776443
No 186
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=46.81 E-value=1.3e+02 Score=25.27 Aligned_cols=103 Identities=20% Similarity=0.132 Sum_probs=58.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCc-ch---HHHHhhhhccCCCCCCeEEEecCC-CCCCCCCCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEY-NH---KRVMKSLEGKNYLGEQIRLVSIPD-GMEPWEERT 76 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~ 76 (459)
+||+++..+..+ -+..|.+.+.+. +|+|..+.+.. .. +..++. ++.+..++. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~---------gIp~~~~~~~~~~------ 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA---------GIATHTLIASAFD------ 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT---------TCEEEECCGGGCS------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc---------CCcEEEeCccccc------
Confidence 478877766554 366777777665 58887665432 22 223333 777776542 111
Q ss_pred ChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEeCcc
Q 012652 77 DPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM-GWSMEVAEKMKLRRAVIWTSC 138 (459)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~-~~~~~~A~~~giP~i~~~~~~ 138 (459)
+ . ...-+++++.+++ .+||+++.-.+. .-...+-..+...++-++++.
T Consensus 63 ~----r-------~~~~~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 63 S----R-------EAYDRELIHEIDM---YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp S----H-------HHHHHHHHHHHGG---GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred c----h-------hhccHHHHHHHHh---cCCCEEEEeChhhhCCHHHHhhccCCEEEEccCc
Confidence 0 0 1111334555555 899999987663 334444555666777766653
No 187
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=46.72 E-value=32 Score=29.83 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=24.5
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQ-GHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~-gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|||+++-..+. +-...+...++.+..-|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 57775555544 44456666777777668888887764
No 188
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=46.70 E-value=20 Score=29.70 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=27.4
Q ss_pred CC-CCEEEEEcCCCccCHHHHHH-HHHHHHhCCCEEEEEeCCc
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLE-FSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~-La~~L~~rGh~Vt~~~~~~ 41 (459)
|+ ++||+++-.. .|+..-+.. +++.|.+.|++|.++....
T Consensus 1 M~~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp --CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCCCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 55 5799988777 887665544 4566666899999886543
No 189
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=46.57 E-value=13 Score=34.62 Aligned_cols=30 Identities=27% Similarity=0.425 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
|||+|+..+-.| +.+|..|+++||+|+++-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 789999766555 778999999999999984
No 190
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=46.53 E-value=1.6e+02 Score=26.35 Aligned_cols=102 Identities=15% Similarity=0.163 Sum_probs=55.9
Q ss_pred EEEEEcCCCcc---C--HHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChH
Q 012652 5 HILVFSTPAQG---H--VIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPG 79 (459)
Q Consensus 5 ~il~~~~~~~g---H--~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 79 (459)
.|++.|....+ . ..-+..+++.|.++|++|.++.++...+..++... ............+.
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~-~~~~~~~~~~~~l~------------- 247 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILA-ALNTEQQAWCRNLA------------- 247 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHT-TSCHHHHTTEEECT-------------
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHH-hhhhccccceEecc-------------
Confidence 46666654221 2 33788999999989999998876655443332210 00000000011111
Q ss_pred HHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeC
Q 012652 80 KLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~ 136 (459)
..-.+.++...++ +-|++|+.. .....+|..+|+|+|.+..
T Consensus 248 ---------g~~sl~e~~ali~-----~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 248 ---------GETQLDQAVILIA-----ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp ---------TTSCHHHHHHHHH-----TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred ---------CcCCHHHHHHHHH-----hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 0111334444443 378998764 4567788899999998754
No 191
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=46.21 E-value=1.2e+02 Score=25.94 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=29.9
Q ss_pred CEEEEE-c-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVF-S-TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~-~-~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
+|++.+ . -++.|=..-...||..|+++|++|.++-.+.
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 455544 3 3455889999999999999999999997654
No 192
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=45.82 E-value=61 Score=30.80 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|...|||+.. .|. -.+.+++++++.|++|.++.++
T Consensus 4 m~~~kiLI~g---~g~--~a~~i~~aa~~~G~~~v~v~~~ 38 (446)
T 3ouz_A 4 MEIKSILIAN---RGE--IALRALRTIKEMGKKAICVYSE 38 (446)
T ss_dssp TCCCEEEECC---CHH--HHHHHHHHHHHTTCEEEEEEEG
T ss_pred cccceEEEEC---CCH--HHHHHHHHHHHcCCEEEEEEcC
Confidence 4455788854 232 4678999999999999988654
No 193
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=45.56 E-value=1.5e+02 Score=25.68 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+-|+++++..+.| --.++|++|.++|++|.++...
T Consensus 5 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 39 (274)
T 3e03_A 5 SGKTLFITGASRG---IGLAIALRAARDGANVAIAAKS 39 (274)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEECCCCh---HHHHHHHHHHHCCCEEEEEecc
Confidence 4466667655542 3467899999999999998754
No 194
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=45.51 E-value=9.9 Score=32.38 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=25.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+++||.|+..+..| ..+|+.|.+.||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 456789988755544 4688999999999998443
No 195
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=45.29 E-value=11 Score=34.01 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKH-----G-FRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~r-----G-h~Vt~~~~ 39 (459)
+|||+|+..+..|. .+|..|.+. | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 46899998776663 568888888 9 99999876
No 196
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=45.28 E-value=33 Score=25.57 Aligned_cols=65 Identities=8% Similarity=-0.041 Sum_probs=44.7
Q ss_pred hcCCCccceeeccCchh---------HHHhhhcCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHH
Q 012652 346 LSHPSIACFLSHCGWNS---------TMEGVSNGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKL 416 (459)
Q Consensus 346 L~~~~~~~~I~HgG~~s---------~~eal~~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i 416 (459)
+..+++ +|-..|..| +..|...|+|++.+=.++.+. .-..++++ +.- + -..+.+.|.++|
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~--i-----V~Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSE--V-----VGWNPHCIRDAL 104 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSE--E-----ECSCHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cce--e-----ccCCHHHHHHHH
Confidence 456666 999999887 567888999999987776542 22224431 222 2 245789999999
Q ss_pred HHHhC
Q 012652 417 VQVLG 421 (459)
Q Consensus 417 ~~ll~ 421 (459)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 98763
No 197
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=45.04 E-value=11 Score=28.71 Aligned_cols=39 Identities=18% Similarity=0.085 Sum_probs=25.4
Q ss_pred HHHHHHHhCCCCCCccEEEeCCCcc--hHHHHHH---HcCCceEEEe
Q 012652 94 EELIEEINGRDDEKIDCFISDGFMG--WSMEVAE---KMKLRRAVIW 135 (459)
Q Consensus 94 ~~l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~---~~giP~i~~~ 135 (459)
++.++.+++ .+||+||.|...+ .|..+++ ..++|++.++
T Consensus 43 ~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 43 QEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 344444444 8999999998876 4555444 3578877543
No 198
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=44.88 E-value=78 Score=27.19 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
+.|+++++..+.| --.++|++|.++|++|.++..
T Consensus 8 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 41 (257)
T 3tl3_A 8 RDAVAVVTGGASG---LGLATTKRLLDAGAQVVVLDI 41 (257)
T ss_dssp --CEEEEETTTSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred cCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3466677655543 346899999999999999876
No 199
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=44.70 E-value=79 Score=26.70 Aligned_cols=112 Identities=13% Similarity=0.122 Sum_probs=0.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHH
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGK 80 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (459)
+.++||+++.++..+.+..++.-.+. +.+++|..+.+.......+..... ++.+..++..-...
T Consensus 10 ~~~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~Vis~~~a~~~~~A~~~------gIp~~~~~~~~~~~-------- 73 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLRSLLDAAVG--DYPARVVAVGVDRECRAAEIAAEA------SVPVFTVRLADHPS-------- 73 (215)
T ss_dssp CSSEEEEEEESSCCHHHHHHHHHSST--TCSEEEEEEEESSCCHHHHHHHHT------TCCEEECCGGGSSS--------
T ss_pred CCCcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEEEEeCCchHHHHHHHHc------CCCEEEeCcccccc--------
Q ss_pred HHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 81 LIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
....++.+.+.++. .+||+++.-.+.. -...+-+.+.-.++-++++..
T Consensus 74 -----r~~~d~~~~~~l~~------~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSLL 122 (215)
T 3da8_A 74 -----RDAWDVAITAATAA------HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALL 122 (215)
T ss_dssp -----HHHHHHHHHHHHHT------TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSCT
T ss_pred -----hhhhhHHHHHHHHh------hCCCEEEEcCchhhCCHHHHhhccCCeEEeCcccc
No 200
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=44.52 E-value=16 Score=31.43 Aligned_cols=39 Identities=10% Similarity=0.067 Sum_probs=33.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN 42 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~ 42 (459)
|||+|..-++-|=..-...||..|+++|++|.++-.+..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 578886666778899999999999999999999976553
No 201
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=44.42 E-value=1.2e+02 Score=24.24 Aligned_cols=142 Identities=13% Similarity=0.177 Sum_probs=78.7
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccce
Q 012652 275 SVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACF 354 (459)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~ 354 (459)
+.|-+-+||.+ +....++....++..+..+-.-+-. ..-.|+.+.+. +.. .....+++|
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~S------aHR~p~~~~~~----------~~~---a~~~g~~Vi 62 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVS------AHRTPKMMVQF----------ASE---ARERGINII 62 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTSHHHHHHH----------HHH---TTTTTCCEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEC------CcCCHHHHHHH----------HHH---HHhCCCcEE
Confidence 45677778654 6677888888888888876544432 23455543211 111 111123348
Q ss_pred eeccCc----hhHHHhhhcCCceeccccccccc------hhhhhhhceeeeeee-eecCCCCcccHHHHHHHHHHHhCCH
Q 012652 355 LSHCGW----NSTMEGVSNGIPFLCWPYFVDQF------LNESYICDIWKVGLK-LDKDESGIITGEEISNKLVQVLGDQ 423 (459)
Q Consensus 355 I~HgG~----~s~~eal~~gvP~v~~P~~~DQ~------~na~rv~~~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 423 (459)
|.=+|. .++..++ .-+|+|.+|...... .-.-.+ - -|+.+. +.+++.+..++..+.-.|.. +.|+
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqm-p-~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~ 138 (163)
T 3ors_A 63 IAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQM-P-GGIPVATTAIGAAGAKNAGILAARMLS-IQNP 138 (163)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTC-C-TTSCCEECCSTHHHHHHHHHHHHHHHH-TTCT
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhC-C-CCCceEEEEcCCcccHHHHHHHHHHHh-CCCH
Confidence 877664 4555554 679999999754311 111112 2 255222 22210123444555544444 3578
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 012652 424 NFKARALELKEITMSSVR 441 (459)
Q Consensus 424 ~~~~~a~~l~~~~~~~~~ 441 (459)
.++++.+.+++..++.+.
T Consensus 139 ~l~~kl~~~r~~~~~~v~ 156 (163)
T 3ors_A 139 SLVEKLNQYESSLIQKVE 156 (163)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999887653
No 202
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=44.30 E-value=1.5e+02 Score=25.80 Aligned_cols=40 Identities=5% Similarity=0.045 Sum_probs=23.6
Q ss_pred CCCCEEEEEcCCCccC-HHH-HHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGH-VIP-LLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH-~~p-~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|.+.+|.++....... +.. ...+.+++.++|+++.+....
T Consensus 1 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 42 (297)
T 3rot_A 1 MVRDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPP 42 (297)
T ss_dssp --CCEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCS
T ss_pred CceEEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCC
Confidence 6677888777554332 222 234556666789998887653
No 203
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=44.10 E-value=31 Score=30.64 Aligned_cols=40 Identities=13% Similarity=0.046 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCEEEEEeCCc
Q 012652 2 SSPHILVFSTPAQ-GHVI---PLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 2 ~~~~il~~~~~~~-gH~~---p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
-++||+++..+.. -|-. ....++++|.++||+|.++....
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 0478998875433 2322 45689999999999999988753
No 204
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=44.01 E-value=17 Score=34.79 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=33.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchHHH
Q 012652 6 ILVFSTPAQGHVIPLLEFSQCLAK-HGFRVTFVNSEYNHKRV 46 (459)
Q Consensus 6 il~~~~~~~gH~~p~~~La~~L~~-rGh~Vt~~~~~~~~~~v 46 (459)
+++...++.|=..-++.+|...+. .|..|.|++.....+.+
T Consensus 203 ~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 203 NIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 567778888999999999999886 58999999987655443
No 205
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=43.76 E-value=9.5 Score=26.10 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=30.6
Q ss_pred hcCCceeccccccccchhhhhhhcee--eeeeeeecCCCCcccHHHHHHHHHHHhC
Q 012652 368 SNGIPFLCWPYFVDQFLNESYICDIW--KVGLKLDKDESGIITGEEISNKLVQVLG 421 (459)
Q Consensus 368 ~~gvP~v~~P~~~DQ~~na~rv~~~~--G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 421 (459)
-+|+|++++--.+.|.+.-..-.++. |+...+- ...++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvl----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE----ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhh----ccCCHHHHHHHHHHHHH
Confidence 36888888877666654322211112 5555443 55678999888887763
No 206
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=43.63 E-value=1.8e+02 Score=26.00 Aligned_cols=95 Identities=12% Similarity=-0.027 Sum_probs=52.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc-----------hHHHHhhhhccCCCCCCeEEEecCCCCCCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN-----------HKRVMKSLEGKNYLGEQIRLVSIPDGMEPW 72 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~ 72 (459)
|||+|+..+ .......++|.++||+|..+.+... .+...+. ++.+......
T Consensus 1 mrivf~gt~-----~fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~---------gIpv~~~~~~---- 62 (305)
T 2bln_A 1 MKTVVFAYH-----DMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER---------GIPVYAPDNV---- 62 (305)
T ss_dssp CEEEEEECH-----HHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH---------TCCEECCSCC----
T ss_pred CEEEEEEcC-----HHHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHc---------CCCEECCCcC----
Confidence 578887643 2234556778888999987765321 2223333 5555432210
Q ss_pred CCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEeCcc
Q 012652 73 EERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM-GWSMEVAEKMKLRRAVIWTSC 138 (459)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~-~~~~~~A~~~giP~i~~~~~~ 138 (459)
. .+.+.+.++. .+||++|+-.+. .-...+-......++-++++.
T Consensus 63 ---~-------------~~~~~~~l~~------~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 107 (305)
T 2bln_A 63 ---N-------------HPLWVERIAQ------LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (305)
T ss_dssp ---C-------------SHHHHHHHHH------TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSC
T ss_pred ---C-------------cHHHHHHHHh------cCCCEEEEeccccccCHHHHhcCcCCEEEecCCc
Confidence 0 1123334444 899999876552 233344444555677777763
No 207
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=43.33 E-value=51 Score=29.86 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=28.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.+||.|+..++.| +-.+|+-|.++||+|+..-..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 5689999988877 557999999999999998653
No 208
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=43.31 E-value=22 Score=32.27 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+.++|++.. +.|.+ -..|+++|.++||+|+.+...
T Consensus 1 m~~~~vlVtG--atG~i--G~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITG--IRGQD--GAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEEC--CCChH--HHHHHHHHHHCCCEEEEEECC
Confidence 6667777664 33433 357899999999999998754
No 209
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=43.29 E-value=13 Score=28.79 Aligned_cols=34 Identities=12% Similarity=0.162 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
+.||+++..+..| ..+|+.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 4578888764434 578999999999999998754
No 210
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=43.22 E-value=37 Score=26.28 Aligned_cols=96 Identities=11% Similarity=0.074 Sum_probs=62.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh-hhhccCCCCCCeEEEecCCCCCCCCCCCChH
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEYNHKRVMK-SLEGKNYLGEQIRLVSIPDGMEPWEERTDPG 79 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 79 (459)
.++|++.. ...+=.-++.+|++|.+. ||++ +.+......+++ . |+....+..+--
T Consensus 3 ~~~ialsv--~D~dK~~~v~~a~~~~~ll~Gf~l--~AT~gTa~~L~e~~---------Gl~v~~v~k~~~--------- 60 (134)
T 2xw6_A 3 MRALALIA--HDAKKEEMVAFCQRHREVLARFPL--VATGTTGRRIEEAT---------GLTVEKLLSGPL--------- 60 (134)
T ss_dssp SCEEEEEE--CGGGHHHHHHHHHHTHHHHTTSCE--EECHHHHHHHHHHH---------CCCCEECSCGGG---------
T ss_pred ccEEEEEE--ecccHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHhh---------CceEEEEEecCC---------
Confidence 45666654 345557789999999998 9954 456677788877 5 665554432100
Q ss_pred HHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCC--c--------chHHHHHHHcCCceEEE
Q 012652 80 KLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGF--M--------GWSMEVAEKMKLRRAVI 134 (459)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~--~--------~~~~~~A~~~giP~i~~ 134 (459)
..++.+-++++. .+.|+||.-.- . .....+|-.++||+++.
T Consensus 61 --------eG~p~I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 61 --------GGDQQMGARVAE------GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp --------THHHHHHHHHHT------TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred --------CCcchHHHHHHC------CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 023445555555 99999986432 1 13577889999999973
No 211
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=43.14 E-value=1.6e+02 Score=25.99 Aligned_cols=78 Identities=10% Similarity=0.010 Sum_probs=53.9
Q ss_pred CEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEE
Q 012652 32 FRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCF 111 (459)
Q Consensus 32 h~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlv 111 (459)
.+..+++.+.+.-+.+.+ |++...+... + .....+.+.++++.+++ .+..+|
T Consensus 190 ~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~---~-------------~eps~~~l~~l~~~ik~---~~v~~I 241 (291)
T 1pq4_A 190 QRKFIVFHPSWAYFARDY---------NLVQIPIEVE---G-------------QEPSAQELKQLIDTAKE---NNLTMV 241 (291)
T ss_dssp CCEEEESSCCCHHHHHHT---------TCEEEESCBT---T-------------BCCCHHHHHHHHHHHHT---TTCCEE
T ss_pred CCEEEEECCchHHHHHHC---------CCEEeecccC---C-------------CCCCHHHHHHHHHHHHH---cCCCEE
Confidence 344455566777777766 7776655311 0 12245667788888887 889999
Q ss_pred EeCCCcc--hHHHHHHHcCCceEEEeCc
Q 012652 112 ISDGFMG--WSMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 112 i~D~~~~--~~~~~A~~~giP~i~~~~~ 137 (459)
+++.... .+-.+|+..|++.+.+.+.
T Consensus 242 f~e~~~~~~~~~~ia~~~g~~v~~ld~l 269 (291)
T 1pq4_A 242 FGETQFSTKSSEAIAAEIGAGVELLDPL 269 (291)
T ss_dssp EEETTSCCHHHHHHHHHHTCEEEEECTT
T ss_pred EEeCCCChHHHHHHHHHcCCeEEEEcCc
Confidence 9988766 5778899999999876543
No 212
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=43.03 E-value=38 Score=27.63 Aligned_cols=87 Identities=14% Similarity=0.072 Sum_probs=58.0
Q ss_pred CccCHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh-hhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHHHHHHhc
Q 012652 13 AQGHVIPLLEFSQCLAKH--GFRVTFVNSEYNHKRVMK-SLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIEKVLQVM 89 (459)
Q Consensus 13 ~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 89 (459)
....=.-++.+|++|.+. ||++ +.+......+++ . |+.+..+..+ +.+ .
T Consensus 35 ~D~dK~~lv~~ak~~~~lL~Gf~L--~AT~gTa~~L~e~~---------Gl~v~~v~k~-~eG----------------G 86 (178)
T 1vmd_A 35 HDRRKRDLLEWVSFNLGTLSKHEL--YATGTTGALLQEKL---------GLKVHRLKSG-PLG----------------G 86 (178)
T ss_dssp CGGGHHHHHHHHHHSHHHHTTSEE--EECHHHHHHHHHHH---------CCCCEECSCG-GGT----------------H
T ss_pred ehhhHHHHHHHHHHHHHHhcCCEE--EEchHHHHHHHHHh---------CceeEEEeec-CCC----------------C
Confidence 345567889999999998 9965 456677778877 5 6665544321 000 2
Q ss_pred cHHHHHHHHHHhCCCCCCccEEEeCCC--c--------chHHHHHHHcCCceEE
Q 012652 90 PGKLEELIEEINGRDDEKIDCFISDGF--M--------GWSMEVAEKMKLRRAV 133 (459)
Q Consensus 90 ~~~~~~l~~~l~~~~~~~pDlvi~D~~--~--------~~~~~~A~~~giP~i~ 133 (459)
++.+.++++. .+.|+||.-.- . .....+|-.++||+++
T Consensus 87 ~pqI~d~I~~------geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 87 DQQIGAMIAE------GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp HHHHHHHHHT------TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred CchHHHHHHC------CCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 3445555555 99999986433 1 1357889999999996
No 213
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=42.94 E-value=1.3e+02 Score=24.15 Aligned_cols=144 Identities=15% Similarity=0.135 Sum_probs=80.3
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccce
Q 012652 275 SVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACF 354 (459)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~ 354 (459)
|.|-+-+||.+ +....++....++..+..+-..+-. ..-.|+.+. +|+.. +....+++|
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S------aHRtp~~l~----------~~~~~---~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVS------AHRTPDKMF----------DYAET---AKERGLKVI 64 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC------TTTCHHHHH----------HHHHH---TTTTTCCEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc------CcCCHHHHH----------HHHHH---HHhCCCcEE
Confidence 46777788754 6667888888888888765444432 234455432 22111 111123448
Q ss_pred eeccCc----hhHHHhhhcCCceecccccccc------chhhhhhhceeeeeeee-ecCCCCcccHHHHHHHHHHHhCCH
Q 012652 355 LSHCGW----NSTMEGVSNGIPFLCWPYFVDQ------FLNESYICDIWKVGLKL-DKDESGIITGEEISNKLVQVLGDQ 423 (459)
Q Consensus 355 I~HgG~----~s~~eal~~gvP~v~~P~~~DQ------~~na~rv~~~~G~G~~~-~~~~~~~~~~~~l~~~i~~ll~~~ 423 (459)
|.=+|. .++..++ .-+|+|.+|..... -.-.-+... |+++.. .+++.+..++..+.-.|-. +.|+
T Consensus 65 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--gvpVatV~I~~ag~~nAa~lAa~Il~-~~d~ 140 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPA--GIPVATFAIGMAGAKNAALFAASILQ-HTDI 140 (166)
T ss_dssp EEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHHHHHHHHHHG-GGCH
T ss_pred EEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCC--CCceEEEecCCccchHHHHHHHHHHc-CCCH
Confidence 887774 3444443 46899999975321 111112222 444332 2210013344444444443 4589
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q 012652 424 NFKARALELKEITMSSVREG 443 (459)
Q Consensus 424 ~~~~~a~~l~~~~~~~~~~~ 443 (459)
+++++.+.+++..++.+.+.
T Consensus 141 ~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 141 NIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998776543
No 214
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=42.70 E-value=22 Score=28.36 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=27.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
.++++++.+. | +.|++++++.|.++|.+|+++ ...
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4677776444 3 899999999999999999999 544
No 215
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=42.67 E-value=41 Score=25.87 Aligned_cols=44 Identities=11% Similarity=0.062 Sum_probs=32.6
Q ss_pred CCEEEEEcCCC---ccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012652 3 SPHILVFSTPA---QGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRV 46 (459)
Q Consensus 3 ~~~il~~~~~~---~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v 46 (459)
+.|++|+...+ .......+.+|...++.||+|+++-...-...+
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLL 61 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHH
Confidence 35777555443 467778899999999999999998876655444
No 216
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=42.63 E-value=26 Score=29.38 Aligned_cols=34 Identities=21% Similarity=0.155 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|||++.. +.|.+ -..|+++|.++||+|+.++-..
T Consensus 1 MkilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVLG--ATGRA--GSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEEc--CCCHH--HHHHHHHHHHCCCEEEEEEecc
Confidence 4666654 33433 3678999999999999998643
No 217
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=42.62 E-value=26 Score=29.23 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=24.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|||++.. +.|.+ -..|+++|.++||+|+.++-..
T Consensus 1 MkvlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIG--ATGRA--GSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEc--CCchh--HHHHHHHHHhCCCEEEEEEcCc
Confidence 4666654 33433 3578999999999999998643
No 218
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=42.31 E-value=12 Score=36.51 Aligned_cols=34 Identities=12% Similarity=0.410 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|.||+|+..+..| +.+|+.|.+.|++||++...+
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 6799999876555 577899998999999998754
No 219
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=42.18 E-value=15 Score=33.89 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=27.8
Q ss_pred CCCCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCEEEEEe
Q 012652 1 MSSPHILVFSTPAQG-H---VIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 1 m~~~~il~~~~~~~g-H---~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
|+|.||+++..+..+ | +.....+++.|.+.||+|+.+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 888899888654333 3 3455678999999999999884
No 220
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=42.14 E-value=74 Score=28.16 Aligned_cols=83 Identities=10% Similarity=0.041 Sum_probs=52.6
Q ss_pred HHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCC
Q 012652 27 LAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIEKVLQVMPGKLEELIEEINGRDDE 106 (459)
Q Consensus 27 L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 106 (459)
|.....+..+++.+.+.-+.+.+ |++...+...-+..+ .....+.++++.+++ .
T Consensus 172 l~~~~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~e--------------ps~~~l~~l~~~ik~---~ 225 (284)
T 3cx3_A 172 FEKATQKTFVTQHTAFSYLAKRF---------GLNQLGIAGISPEQE--------------PSPRQLTEIQEFVKT---Y 225 (284)
T ss_dssp HHSCSCCCEEEEESCCHHHHHHT---------TCCEEEEECSSTTCC--------------CCSHHHHHHHHHHHH---T
T ss_pred HhcCCCCEEEEECCchHHHHHHc---------CCEEeeccCCCCCCC--------------CCHHHHHHHHHHHHH---c
Confidence 33333344555677777777776 565554321111111 134556667777766 8
Q ss_pred CccEEEeCCCcc--hHHHHHHHcCCceEEEe
Q 012652 107 KIDCFISDGFMG--WSMEVAEKMKLRRAVIW 135 (459)
Q Consensus 107 ~pDlvi~D~~~~--~~~~~A~~~giP~i~~~ 135 (459)
+..+|+++.... .+-.+|+..|++.+.+.
T Consensus 226 ~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 226 KVKTIFTESNASSKVAETLVKSTGVGLKTLN 256 (284)
T ss_dssp TCCCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHcCCeEEEec
Confidence 899999998766 56788999999988653
No 221
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=42.01 E-value=27 Score=29.65 Aligned_cols=36 Identities=19% Similarity=0.184 Sum_probs=25.1
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
+.++|++.. +.|.+ -..|+++|.++||+|+.++-..
T Consensus 20 ~~~~ilVtG--atG~i--G~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVG--ANGKV--ARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEEC--CCChH--HHHHHHHHHhCCCeEEEEECCh
Confidence 356776664 33333 3578899999999999998654
No 222
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=41.94 E-value=49 Score=28.28 Aligned_cols=23 Identities=22% Similarity=0.258 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCc
Q 012652 19 PLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 19 p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
--.++|++|.++|++|+++..+.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCc
Confidence 45788999999999999987644
No 223
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=41.57 E-value=25 Score=27.14 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=25.1
Q ss_pred CCccEEEeCCCcc--hHHHHHHHc-------CCceEEEeCcch
Q 012652 106 EKIDCFISDGFMG--WSMEVAEKM-------KLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlvi~D~~~~--~~~~~A~~~-------giP~i~~~~~~~ 139 (459)
.+||+||.|...+ -|..+++.. ++|.+.++....
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCC
Confidence 6899999998877 566666543 589888776544
No 224
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=41.54 E-value=30 Score=30.78 Aligned_cols=34 Identities=26% Similarity=0.220 Sum_probs=25.3
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+ ++||.|+..+..|. .+|+.|.+.||+|+++..
T Consensus 1 M~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp ---CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 65 68999998766664 468889899999987654
No 225
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=41.42 E-value=18 Score=31.19 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
++||.|+..+..|- .||..|+++||+|+.+..
T Consensus 6 ~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 68999999887774 589999999999998766
No 226
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=41.39 E-value=1.5e+02 Score=24.59 Aligned_cols=56 Identities=14% Similarity=0.034 Sum_probs=39.2
Q ss_pred hhcCCceecccc----ccccchhhhhhhceeeeeeeeecC--CCC------cccHHHHHHHHHHHhCCH
Q 012652 367 VSNGIPFLCWPY----FVDQFLNESYICDIWKVGLKLDKD--ESG------IITGEEISNKLVQVLGDQ 423 (459)
Q Consensus 367 l~~gvP~v~~P~----~~DQ~~na~rv~~~~G~G~~~~~~--~~~------~~~~~~l~~~i~~ll~~~ 423 (459)
+..++|+|++|- .+..+.|..++.+ +|+=+..... ... ..+.+.|.+.|.+.|++.
T Consensus 120 Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~~ 187 (201)
T 3lqk_A 120 LRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRGQ 187 (201)
T ss_dssp HHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTTC
T ss_pred hhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhcC
Confidence 557999999994 5678889999998 6865544320 111 133478899999988753
No 227
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=41.32 E-value=2e+02 Score=26.10 Aligned_cols=35 Identities=11% Similarity=0.088 Sum_probs=25.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
-|+++++..+.| --.++|++|+++|++|.++....
T Consensus 45 gk~vlVTGas~G---IG~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 45 GCTVFITGASRG---IGKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCEEEEeCCChH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 366777755543 34688999999999999987543
No 228
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=41.17 E-value=25 Score=31.49 Aligned_cols=29 Identities=17% Similarity=0.323 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
||.|+..+.-|. ++|+.|.++||+|+++.
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 799998887774 68999999999999864
No 229
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=40.82 E-value=16 Score=33.76 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++||.|+..+..| ..+|..|++.||+|++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 5789999877666 46899999999999998874
No 230
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=40.78 E-value=1.8e+02 Score=25.26 Aligned_cols=38 Identities=11% Similarity=0.100 Sum_probs=21.5
Q ss_pred CC-CCEEEEEcCCCccCHH-HH-HHHHHHHHhCCCEEEEEe
Q 012652 1 MS-SPHILVFSTPAQGHVI-PL-LEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~-p~-~~La~~L~~rGh~Vt~~~ 38 (459)
|+ +.+|+++.......+. .+ ..+-+++.++|+++.++.
T Consensus 1 ~s~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 41 (305)
T 3g1w_A 1 MSLNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRG 41 (305)
T ss_dssp ----CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 56 4567766655443333 33 345666777899998854
No 231
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=40.70 E-value=16 Score=32.99 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=23.0
Q ss_pred hhcCCCccceeeccCchhHHHhhhc----CCceeccc
Q 012652 345 VLSHPSIACFLSHCGWNSTMEGVSN----GIPFLCWP 377 (459)
Q Consensus 345 iL~~~~~~~~I~HgG~~s~~eal~~----gvP~v~~P 377 (459)
....+++ +|+-||-||+.+++.. ++|++.++
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~ 106 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVN 106 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEe
Confidence 3445666 9999999999999754 88988884
No 232
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=40.45 E-value=98 Score=29.37 Aligned_cols=40 Identities=18% Similarity=0.394 Sum_probs=32.4
Q ss_pred CEEE-EEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012652 4 PHIL-VFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNH 43 (459)
Q Consensus 4 ~~il-~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 43 (459)
.+|+ ++..++.|=..-+..||..|+++|++|.++..+.+.
T Consensus 97 ~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r 137 (433)
T 3kl4_A 97 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYR 137 (433)
T ss_dssp SEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 3444 555667799999999999999999999999876544
No 233
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=40.36 E-value=1.7e+02 Score=25.73 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-|+++++.++.| --.++|++|+++|++|.++...
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEecc
Confidence 367777766553 3578999999999999988643
No 234
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=40.24 E-value=63 Score=28.17 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
++||++.. + |.+- ..|+++|.++||+|+.++...
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcCh
Confidence 46787775 4 6553 467899999999999998654
No 235
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=40.02 E-value=28 Score=29.23 Aligned_cols=36 Identities=28% Similarity=0.317 Sum_probs=24.8
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ +++|++.. +.|.+ -..|+++|.++||+|+.++..
T Consensus 1 M~~m~~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 1 MEKVKKIVLIG--ASGFV--GSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp --CCCEEEEET--CCHHH--HHHHHHHHHTTTCEEEEECSC
T ss_pred CCCCCEEEEEc--CCchH--HHHHHHHHHHCCCEEEEEEcC
Confidence 66 46777664 34433 357899999999999998764
No 236
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=40.01 E-value=36 Score=30.77 Aligned_cols=32 Identities=22% Similarity=0.397 Sum_probs=26.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.+||.|+..+..| ..+|+.|.+.||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 4689999877777 5689999999999998754
No 237
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=39.89 E-value=35 Score=31.80 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=27.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|++++|+++..+.. -+..|..|.++||+|+++-..
T Consensus 1 m~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEec
Confidence 77789998876643 567899999999999999764
No 238
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=39.79 E-value=18 Score=33.60 Aligned_cols=40 Identities=10% Similarity=0.135 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCCCccCH----HHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHV----IPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~----~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+|+||+++..+..+-- .....+++.|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 88899998887655443 44558889998999999998754
No 239
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=39.74 E-value=65 Score=30.51 Aligned_cols=25 Identities=12% Similarity=0.141 Sum_probs=19.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGF 32 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh 32 (459)
+||||++..+++. .+||..|.+.++
T Consensus 3 ~mkvlviG~ggre-----~ala~~l~~s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGRE-----HALGWKAAQSPL 27 (431)
T ss_dssp CEEEEEEECSHHH-----HHHHHHHTTCTT
T ss_pred CcEEEEECCCHHH-----HHHHHHHHhCCC
Confidence 6899999877544 468999988765
No 240
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=39.60 E-value=22 Score=30.57 Aligned_cols=23 Identities=13% Similarity=0.231 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCc
Q 012652 19 PLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 19 p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
--.++|++|.++|++|++++.+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 45678999999999999998764
No 241
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=39.29 E-value=30 Score=31.35 Aligned_cols=35 Identities=29% Similarity=0.361 Sum_probs=24.3
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+ +++|++.. +.|.+ -..|+++|.++||+|+.+..
T Consensus 2 M~~~~~vlVTG--atG~i--G~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 2 MSTKGTILVTG--GAGYI--GSHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp CCSSCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEEEec--CCcHH--HHHHHHHHHHCCCcEEEEec
Confidence 55 45666554 33333 25789999999999999864
No 242
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=39.17 E-value=12 Score=31.45 Aligned_cols=34 Identities=9% Similarity=0.098 Sum_probs=25.8
Q ss_pred CCccEEE-eCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 106 EKIDCFI-SDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlvi-~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
..||+|| .|+..- -+..=|.++|||+|.+..+.+
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn~ 149 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSNN 149 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCCC
Confidence 4699885 666543 566779999999999987655
No 243
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=38.99 E-value=90 Score=30.33 Aligned_cols=39 Identities=8% Similarity=0.241 Sum_probs=34.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNH 43 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 43 (459)
.|+|+..++.|=..-+..||..|+++|++|.++..+.+.
T Consensus 103 vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 103 VIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 577888888899999999999999999999999876543
No 244
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=38.97 E-value=2e+02 Score=25.23 Aligned_cols=86 Identities=7% Similarity=-0.082 Sum_probs=51.3
Q ss_pred CCCccceeeccCchhHHHh-----hhc---CCceeccccccccchhhh-----hhhceee-eeeeeecCCCCcccHHHHH
Q 012652 348 HPSIACFLSHCGWNSTMEG-----VSN---GIPFLCWPYFVDQFLNES-----YICDIWK-VGLKLDKDESGIITGEEIS 413 (459)
Q Consensus 348 ~~~~~~~I~HgG~~s~~ea-----l~~---gvP~v~~P~~~DQ~~na~-----rv~~~~G-~G~~~~~~~~~~~~~~~l~ 413 (459)
.+++ +|.--|...+.+. -.. |+|+-++ |.+.++. .+.+. + +-+.+....+...-+..|+
T Consensus 106 ~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~g-~~l~IaIST~Gksp~lA~~ir 178 (274)
T 1kyq_A 106 AWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEIG-DRLQILISTNGLSPRFGALVR 178 (274)
T ss_dssp CEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEET-TTEEEEEEESSSCHHHHHHHH
T ss_pred CeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEeC-CCEEEEEECCCCCcHHHHHHH
Confidence 5555 8877776543333 333 6777444 5555554 33331 2 2233323223445578999
Q ss_pred HHHHHHh---C--C-HHHHHHHHHHHHHHHhhh
Q 012652 414 NKLVQVL---G--D-QNFKARALELKEITMSSV 440 (459)
Q Consensus 414 ~~i~~ll---~--~-~~~~~~a~~l~~~~~~~~ 440 (459)
+.|...+ . + ..+-+.+.++++.+++..
T Consensus 179 ~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~ 211 (274)
T 1kyq_A 179 DEIRNLFTQMGDLALEDAVVKLGELRRGIRLLA 211 (274)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhC
Confidence 9999999 5 3 367888888888888753
No 245
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=38.93 E-value=46 Score=25.81 Aligned_cols=38 Identities=18% Similarity=0.367 Sum_probs=26.5
Q ss_pred CEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLL-EFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~-~La~~L~~rGh~Vt~~~~~~ 41 (459)
+||+++-....|+..-+. .|++.|.++|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 467666555677765444 46777888899999987644
No 246
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=38.88 E-value=44 Score=30.48 Aligned_cols=73 Identities=10% Similarity=0.091 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHh
Q 012652 287 LDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEG 366 (459)
Q Consensus 287 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~ea 366 (459)
.+.+..+.+.++|.+...+.||...++. .-.++.++++...+-+++.+ ||-+.-...+.-+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 122 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY-----------------NSNGLLKYLDYDLIRENPKF--FCGYSDITALNNA 122 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHHhhcChhHHHhCCeE--EEEecchHHHHHH
Confidence 3455678899999888888898887651 11234455555555555555 6666666666666
Q ss_pred hh--cCCceecccc
Q 012652 367 VS--NGIPFLCWPY 378 (459)
Q Consensus 367 l~--~gvP~v~~P~ 378 (459)
++ .|++.+.=|.
T Consensus 123 l~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 123 IYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhhCCcEEEccc
Confidence 55 3665555443
No 247
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=38.75 E-value=24 Score=33.06 Aligned_cols=59 Identities=19% Similarity=0.366 Sum_probs=38.5
Q ss_pred hhhhhcCCCccceeeccCchhHHHhhhc----CC-ceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHH
Q 012652 342 QQRVLSHPSIACFLSHCGWNSTMEGVSN----GI-PFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKL 416 (459)
Q Consensus 342 q~~iL~~~~~~~~I~HgG~~s~~eal~~----gv-P~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i 416 (459)
..++-..+|+ +|+-||-||+..|+.. ++ |++.+.. -+ + |- + ..++.+++.+++
T Consensus 108 ~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~--------G~----l--GF-L-----t~~~~~~~~~al 165 (388)
T 3afo_A 108 EQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL--------GT----L--GF-L-----SPFDFKEHKKVF 165 (388)
T ss_dssp HHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC--------SS----C--CS-S-----CCEEGGGHHHHH
T ss_pred hhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC--------CC----c--cc-C-----CcCChHHHHHHH
Confidence 3445556677 9999999999999654 56 6877731 11 1 11 1 234567788888
Q ss_pred HHHhCC
Q 012652 417 VQVLGD 422 (459)
Q Consensus 417 ~~ll~~ 422 (459)
.+++.+
T Consensus 166 ~~il~g 171 (388)
T 3afo_A 166 QEVISS 171 (388)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 888754
No 248
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=38.52 E-value=66 Score=27.83 Aligned_cols=39 Identities=21% Similarity=0.114 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQ-----------GHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~-----------gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
+.||||+-.... -+..=++.--..|.+.|++|+++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 368998765532 225566777889999999999999743
No 249
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=38.21 E-value=27 Score=30.98 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=26.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+..||.|+..+..| ..+|+.|+++||+|+++...
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 446789998665544 56899999999999997543
No 250
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=38.02 E-value=28 Score=27.18 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=28.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
.++++++.+. =+.|++++++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4677776444 4899999999999999999998 544
No 251
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=37.77 E-value=48 Score=28.89 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=25.7
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|.+.|+++++.++.| --.++|++|.++|++|.+...
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 444567777755442 357899999999999988744
No 252
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=37.76 E-value=32 Score=25.43 Aligned_cols=33 Identities=6% Similarity=-0.013 Sum_probs=26.1
Q ss_pred ccCHHHHHHHHHHHHhC-CC-EEEEEeCCcchHHH
Q 012652 14 QGHVIPLLEFSQCLAKH-GF-RVTFVNSEYNHKRV 46 (459)
Q Consensus 14 ~gH~~p~~~La~~L~~r-Gh-~Vt~~~~~~~~~~v 46 (459)
.......+.+|..+.+. || +|+++-..+.....
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 35567789999999999 99 99999886665544
No 253
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=37.74 E-value=35 Score=31.01 Aligned_cols=98 Identities=9% Similarity=0.054 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc--chHHHH---hhhhccCCCCCCeEEEecCCCCCCCCCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY--NHKRVM---KSLEGKNYLGEQIRLVSIPDGMEPWEER 75 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~--~~~~v~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 75 (459)
|++++|++... .|.+ -..|+++|.++||+|+.++-.. ..+... ... ..++.+...+ +.
T Consensus 8 M~~~~IlVtGa--tG~i--G~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~------~~~v~~~~~D--l~----- 70 (346)
T 3i6i_A 8 SPKGRVLIAGA--TGFI--GQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE------DKGAIIVYGL--IN----- 70 (346)
T ss_dssp ---CCEEEECT--TSHH--HHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH------HTTCEEEECC--TT-----
T ss_pred CCCCeEEEECC--CcHH--HHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH------hCCcEEEEee--cC-----
Confidence 44457777653 3433 3568899999999999998754 222221 110 0255555422 10
Q ss_pred CChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcc------hHHHHHHHcC-CceEEE
Q 012652 76 TDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMG------WSMEVAEKMK-LRRAVI 134 (459)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~------~~~~~A~~~g-iP~i~~ 134 (459)
+ ...+.++++. .++|.||.-.... ....+|...| ++.+..
T Consensus 71 -d------------~~~l~~~~~~------~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 71 -E------------QEAMEKILKE------HEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp -C------------HHHHHHHHHH------TTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred -C------------HHHHHHHHhh------CCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 0 2334555555 6799999765431 2456667778 887763
No 254
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=37.53 E-value=63 Score=30.20 Aligned_cols=94 Identities=12% Similarity=-0.015 Sum_probs=51.2
Q ss_pred HHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHHHHHHhccHHHHHHHHHHh
Q 012652 22 EFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIEKVLQVMPGKLEELIEEIN 101 (459)
Q Consensus 22 ~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 101 (459)
.|.+.|.+.|.+|.+++.+...+...+........ ++.+ .+. .+.... . ...++++.+.++
T Consensus 43 ~l~~~l~~~g~r~liVtd~~~~~~~~~~v~~~L~~--g~~~-~~~-~~~~~p-~--------------~~~v~~~~~~~~ 103 (387)
T 3uhj_A 43 KLAAYLAPLGKRALVLIDRVLFDALSERIGKSCGD--SLDI-RFE-RFGGEC-C--------------TSEIERVRKVAI 103 (387)
T ss_dssp TTHHHHGGGCSEEEEEECTTTHHHHHHHC--------CCEE-EEE-ECCSSC-S--------------HHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEECchHHHHHHHHHHHHHHc--CCCe-EEE-EcCCCC-C--------------HHHHHHHHHHHh
Confidence 45667777788999999876655432221111111 4443 111 111110 0 122334444444
Q ss_pred CCCCCCccEEEeCCCcc---hHHHHHHHcCCceEEEeCc
Q 012652 102 GRDDEKIDCFISDGFMG---WSMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 102 ~~~~~~pDlvi~D~~~~---~~~~~A~~~giP~i~~~~~ 137 (459)
+ .++|+||.=.--. .+-.+|...++|+|.+-++
T Consensus 104 ~---~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 104 E---HGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp H---HTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSS
T ss_pred h---cCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCc
Confidence 4 6799998765433 5667788899999987665
No 255
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=37.51 E-value=20 Score=33.57 Aligned_cols=40 Identities=8% Similarity=0.073 Sum_probs=29.9
Q ss_pred CCCCEEEEEcCCCccCH----HHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHV----IPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~----~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++||+++..+..+-- .....+++.|.+.||+|+.+...
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 77889998886655443 34558889998899999998854
No 256
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=37.28 E-value=42 Score=28.65 Aligned_cols=34 Identities=6% Similarity=-0.026 Sum_probs=24.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.|.++++..+.| --..+|++|.++|++|+++...
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 7 ARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 455566644432 3468899999999999988754
No 257
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=37.22 E-value=34 Score=30.12 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.+.|+++++.++.| --.++|++|+++|++|.++...
T Consensus 22 ~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 22 SRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ---CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 34467777755543 3467899999999999887754
No 258
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=37.11 E-value=19 Score=33.45 Aligned_cols=58 Identities=12% Similarity=0.191 Sum_probs=37.5
Q ss_pred hhhhcCCCccceeeccCchhHHHhhh----cCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHH
Q 012652 343 QRVLSHPSIACFLSHCGWNSTMEGVS----NGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQ 418 (459)
Q Consensus 343 ~~iL~~~~~~~~I~HgG~~s~~eal~----~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ 418 (459)
.++-..+|+ +|+=||-||++.|.. .++|++.+ |.-+ +|-. -.++.+++.+++.+
T Consensus 103 ~~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGi--------N~G~------LGFL------t~~~~~~~~~~l~~ 160 (365)
T 3pfn_A 103 DDISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAF--------HLGS------LGFL------TPFSFENFQSQVTQ 160 (365)
T ss_dssp CCCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEE--------ESSS------CTTT------CCEESTTHHHHHHH
T ss_pred hhcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEE--------cCCC------Cccc------eeecHHHHHHHHHH
Confidence 344456676 999999999999976 35788776 2111 1111 23456777777777
Q ss_pred HhCC
Q 012652 419 VLGD 422 (459)
Q Consensus 419 ll~~ 422 (459)
++++
T Consensus 161 vl~g 164 (365)
T 3pfn_A 161 VIEG 164 (365)
T ss_dssp HHHS
T ss_pred HHcC
Confidence 7754
No 259
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=37.10 E-value=20 Score=32.13 Aligned_cols=33 Identities=9% Similarity=0.008 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++||.|+..+..|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 56899998776663 6899999999999998653
No 260
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=37.06 E-value=27 Score=30.78 Aligned_cols=32 Identities=25% Similarity=0.168 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|||+|+..+..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 478888765555 36889999999999998654
No 261
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=37.04 E-value=22 Score=33.82 Aligned_cols=35 Identities=17% Similarity=0.372 Sum_probs=23.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~ 41 (459)
|+| ||+++..+..| +..|+.|+++ +++||++....
T Consensus 1 M~K-~VvIIGgG~aG-----l~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 1 MAK-HVVVIGGGVGG-----IATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp -CC-EEEEECSSHHH-----HHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCC-cEEEECCCHHH-----HHHHHHHhccCcCCeEEEEcCCC
Confidence 654 78888755444 3456667664 49999998765
No 262
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=36.79 E-value=14 Score=32.08 Aligned_cols=35 Identities=9% Similarity=0.085 Sum_probs=26.5
Q ss_pred CCccEEE-eCCCcc-hHHHHHHHcCCceEEEeCcchh
Q 012652 106 EKIDCFI-SDGFMG-WSMEVAEKMKLRRAVIWTSCAA 140 (459)
Q Consensus 106 ~~pDlvi-~D~~~~-~~~~~A~~~giP~i~~~~~~~~ 140 (459)
..||+|| .|+..- -+..=|.++|||+|.++.+.+-
T Consensus 150 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn~d 186 (253)
T 3bch_A 150 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSP 186 (253)
T ss_dssp CSCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTTCC
T ss_pred CCCCEEEEECCCccchHHHHHHHhCCCEEEEEcCCCC
Confidence 5699985 666544 5667799999999999877553
No 263
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=36.72 E-value=2.3e+02 Score=25.22 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
-|+++++.++.| --.++|++|+++|++|.++..
T Consensus 27 gk~vlVTGas~G---IG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 27 GRVVIVTGAGGG---IGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367777755542 346899999999999998854
No 264
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=36.65 E-value=61 Score=27.14 Aligned_cols=45 Identities=13% Similarity=-0.032 Sum_probs=31.0
Q ss_pred HHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEE
Q 012652 265 LKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWV 309 (459)
Q Consensus 265 ~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 309 (459)
.+|+.+...+.++|+..++......+.+..+.++|+++|..+.++
T Consensus 19 ~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 19 TEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 455544444669999887654344567888999999999875543
No 265
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=36.58 E-value=26 Score=32.39 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+++||.|+..+..| ..+|+.|.++||+|+++..
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 346899998765544 4789999999999998854
No 266
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=36.57 E-value=14 Score=31.33 Aligned_cols=33 Identities=6% Similarity=0.252 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|||+++.. |.+ ...+|+.|.++||+|+++....
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECCH
Confidence 46777764 333 4578999999999999998643
No 267
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=36.55 E-value=1.9e+02 Score=25.87 Aligned_cols=39 Identities=8% Similarity=0.122 Sum_probs=23.0
Q ss_pred CCCCEEEEEcCCCcc--CHHH-HHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQG--HVIP-LLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~g--H~~p-~~~La~~L~~rGh~Vt~~~~ 39 (459)
|++.+|.++.....+ .+.. ...+-+++.+.|+++.+...
T Consensus 1 ~~~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~ 42 (350)
T 3h75_A 1 MSLTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYA 42 (350)
T ss_dssp --CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 677888877655444 2222 23445556677999888755
No 268
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=36.41 E-value=30 Score=31.23 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=54.3
Q ss_pred CEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCEEEEE-eCCcchHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCCh
Q 012652 4 PHILVFSTPAQG--H--VIPLLEFSQCLAKHGFRVTFV-NSEYNHKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDP 78 (459)
Q Consensus 4 ~~il~~~~~~~g--H--~~p~~~La~~L~~rGh~Vt~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 78 (459)
..|++.|..+.. . ...+.+|++.|.++|++|.++ +++...+..++... ...+++ +.
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~----~~~~~~---l~------------ 239 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAE----GFAYVE---VL------------ 239 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHT----TCTTEE---EC------------
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHh----hCCccc---cc------------
Confidence 346677654432 1 236788999998889998886 33333333322210 001111 00
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcchHHHHHHHcCCceEEEeC
Q 012652 79 GKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMGWSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~~~A~~~giP~i~~~~ 136 (459)
....+.++...++ +-|++|+.- .....+|..+|+|++.+..
T Consensus 240 ----------g~~sl~el~ali~-----~a~l~I~~D--SG~~HlAaa~g~P~v~lfg 280 (326)
T 2gt1_A 240 ----------PKMSLEGVARVLA-----GAKFVVSVD--TGLSHLTAALDRPNITVYG 280 (326)
T ss_dssp ----------CCCCHHHHHHHHH-----TCSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred ----------CCCCHHHHHHHHH-----hCCEEEecC--CcHHHHHHHcCCCEEEEEC
Confidence 0111334444442 378998774 3567788889999998764
No 269
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=36.37 E-value=48 Score=27.97 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=24.0
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ +.|.++++.++ |-+ -..++++|.++||+|+++...
T Consensus 1 M~~~~k~vlVtGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAVLITGAS-RGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp ---CCCEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEECC
Confidence 65 33455555433 333 468899999999999988764
No 270
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=36.33 E-value=21 Score=27.39 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.+|+++.. |.+- ..+++.|.+.|++|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 46887764 3332 56789999999999988764
No 271
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=35.49 E-value=51 Score=28.83 Aligned_cols=37 Identities=14% Similarity=0.052 Sum_probs=25.4
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ +.|+++++.++. - --.++|++|.++|++|..+...
T Consensus 1 M~~~~k~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 1 MSESAKVWLVTGASS-G--FGRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp ---CCCEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCcEEEEECCCC-h--HHHHHHHHHHHCCCEEEEEeCC
Confidence 55 456777775543 2 2457899999999999988754
No 272
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=35.49 E-value=15 Score=34.11 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=25.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
||.|+..+..| ..+|..|.++||+|+++...
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 89998876666 46789999999999998754
No 273
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=35.39 E-value=31 Score=28.85 Aligned_cols=34 Identities=12% Similarity=0.213 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|||++.. +.|-+ -..++++|.++||+|+.++-..
T Consensus 1 M~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVG--STGRV--GKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEECCc
Confidence 3676664 33333 2588999999999999998643
No 274
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=35.16 E-value=31 Score=30.78 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=25.5
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ +++|+++. +.|.+ -..++++|.++||+|+.++-.
T Consensus 1 M~~~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIVG--GTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEES--TTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCCCCEEEEEc--CCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 66 56777664 34444 356789999999999998865
No 275
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=35.04 E-value=39 Score=28.84 Aligned_cols=36 Identities=3% Similarity=0.035 Sum_probs=29.0
Q ss_pred CCEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 3 SPHILVFSTP--AQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 3 ~~~il~~~~~--~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
+||.+|++.. ..|=..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 5666665533 44889999999999999999999973
No 276
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=35.00 E-value=38 Score=30.47 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++||.|+..+..| ..+|+.|++.||+|+++...
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 5789998766544 56899999999999988653
No 277
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=34.97 E-value=31 Score=31.72 Aligned_cols=37 Identities=14% Similarity=0.279 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKH-GFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~r-Gh~Vt~~~~~~ 41 (459)
|++++|++.. +.|.+- ..|+++|.++ ||+|+.+....
T Consensus 22 m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 22 MKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp -CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESCC
T ss_pred cCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCCh
Confidence 3456777664 334433 5788999988 99999998643
No 278
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=34.88 E-value=2e+02 Score=24.01 Aligned_cols=105 Identities=16% Similarity=0.123 Sum_probs=0.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcch----HHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEYNH----KRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTD 77 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 77 (459)
+||+++..+..+ .+.+|.+.+.+. +|+|..+.+.... +..++. ++.+..++..-...
T Consensus 1 ~riaVl~SG~Gs---~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~~~----- 63 (209)
T 1meo_A 1 ARVAVLISGTGS---NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERA---------GIPTRVINHKLYKN----- 63 (209)
T ss_dssp CEEEEEESSSCT---THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHT---------TCCEEECCGGGSSS-----
T ss_pred CeEEEEEECCch---HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHc---------CCCEEEECccccCc-----
Q ss_pred hHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 78 PGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
....++.+.+.++. .+||+|+.-.+.. -...+-..+...++-++++..
T Consensus 64 --------r~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLL 112 (209)
T 1meo_A 64 --------RVEFDSAIDLVLEE------FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLL 112 (209)
T ss_dssp --------HHHHHHHHHHHHHH------TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESSST
T ss_pred --------hhhhhHHHHHHHHh------cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccCcC
No 279
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=34.72 E-value=39 Score=30.62 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=24.2
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++++|++.. +.|.+ -..|+++|.++||+|+.+...
T Consensus 26 ~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 26 DRKRILITG--GAGFV--GSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp -CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEc--CccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 356676664 33433 357889999999999998753
No 280
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=34.57 E-value=12 Score=36.26 Aligned_cols=34 Identities=15% Similarity=0.251 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
.|||+++..+-.| ..||+.|.+.||+|+++-.+.
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 6899998877555 468999999999999987643
No 281
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=34.48 E-value=89 Score=25.39 Aligned_cols=40 Identities=13% Similarity=0.166 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|+.+||+|+.+++.. ..-+....+.|.+.|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 345789998776544 4456667788889999999999754
No 282
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=34.44 E-value=43 Score=26.88 Aligned_cols=39 Identities=15% Similarity=0.292 Sum_probs=28.9
Q ss_pred CCEEEEEcCCCc--cC-HHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQ--GH-VIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~--gH-~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
..+|+|+|.-+- .. =++...|++.|.++|.+|.|..+|-
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 457888873211 22 2488899999999999999999853
No 283
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=34.31 E-value=2.2e+02 Score=27.36 Aligned_cols=41 Identities=15% Similarity=0.014 Sum_probs=34.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcchHHH
Q 012652 6 ILVFSTPAQGHVIPLLEFSQCLAKH-GFRVTFVNSEYNHKRV 46 (459)
Q Consensus 6 il~~~~~~~gH~~p~~~La~~L~~r-Gh~Vt~~~~~~~~~~v 46 (459)
+++...++.|=..-++.+|..++.+ |..|.+++.+...+.+
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 5566788889999999999999887 9999999987665444
No 284
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=34.28 E-value=32 Score=30.52 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=25.0
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ +++|+++.. .|.+ -..|+++|.++||+|+.++-.
T Consensus 1 M~~~~~ilVtGa--tG~i--G~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 1 MGSRSRILLIGA--TGYI--GRHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp -CCCCCEEEEST--TSTT--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEEEcC--CcHH--HHHHHHHHHhCCCCEEEEECC
Confidence 66 567776653 3433 246789999999999998764
No 285
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=34.09 E-value=60 Score=23.65 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=22.6
Q ss_pred CCccEEEeCCCcc--hHHHHHH----HcCCceEEEeCcch
Q 012652 106 EKIDCFISDGFMG--WSMEVAE----KMKLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlvi~D~~~~--~~~~~A~----~~giP~i~~~~~~~ 139 (459)
.+||+||.|...+ .+..+.+ ..++|.+.++....
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 7899999997755 3443333 34788887765443
No 286
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=33.83 E-value=44 Score=26.90 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=28.9
Q ss_pred CCEEEEEcCCC--ccC-HHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPA--QGH-VIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~--~gH-~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
..+|+|+|.-+ -.. =++...|++.|.++|.+|.|..+|-
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35788887321 122 2488899999999999999999853
No 287
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=33.81 E-value=1.1e+02 Score=27.20 Aligned_cols=68 Identities=9% Similarity=0.058 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhh
Q 012652 289 HNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVS 368 (459)
Q Consensus 289 ~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~ 368 (459)
.+.+..+...|+..+..+.+..... +.... ..+.+ +....++ +|.-||-||+.|++.
T Consensus 25 ~~~~~~i~~~l~~~~~~~~~~~t~~---------~~~a~----------~~~~~--~~~~~d~--vv~~GGDGTl~~v~~ 81 (304)
T 3s40_A 25 HTNLTKIVPPLAAAFPDLHILHTKE---------QGDAT----------KYCQE--FASKVDL--IIVFGGDGTVFECTN 81 (304)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEECCS---------TTHHH----------HHHHH--HTTTCSE--EEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEEccC---------cchHH----------HHHHH--hhcCCCE--EEEEccchHHHHHHH
Confidence 3556777777877777766655432 11111 00111 1123445 999999999998764
Q ss_pred ------cCCceeccccc
Q 012652 369 ------NGIPFLCWPYF 379 (459)
Q Consensus 369 ------~gvP~v~~P~~ 379 (459)
.++|+.++|..
T Consensus 82 ~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 82 GLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp HHTTCSSCCEEEEEECS
T ss_pred HHhhCCCCCcEEEecCC
Confidence 57899999963
No 288
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=33.63 E-value=55 Score=27.16 Aligned_cols=138 Identities=9% Similarity=-0.003 Sum_probs=72.0
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecc-----cchhhhhcCCC
Q 012652 276 VIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGW-----APQQRVLSHPS 350 (459)
Q Consensus 276 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~-----vpq~~iL~~~~ 350 (459)
+++.-.|+.+... ...+++.+.+.+..+-.+.+... ..-+...-.+...+++...-| +.+-++...+|
T Consensus 11 IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~A----~~fi~~~~~~~l~~~v~~~~~~~~~~~~hi~l~~~aD 83 (194)
T 1p3y_1 11 LLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKTA----EDLIPAHTVSYFCDHVYSEHGENGKRHSHVEIGRWAD 83 (194)
T ss_dssp EEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHHH----HHHSCHHHHGGGSSEEECTTCSSSCCCCHHHHHHHCS
T ss_pred EEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchhH----HHHHHHHHHHHhcCCEeccccccCCCcCcccccccCC
Confidence 5555567663321 23455556556776666654320 001111111223344221122 23344445555
Q ss_pred ccceeeccCchhHHH-------------hhhcCCceecccccc----cc---chhhhhhhceeeeeeeeecCC-------
Q 012652 351 IACFLSHCGWNSTME-------------GVSNGIPFLCWPYFV----DQ---FLNESYICDIWKVGLKLDKDE------- 403 (459)
Q Consensus 351 ~~~~I~HgG~~s~~e-------------al~~gvP~v~~P~~~----DQ---~~na~rv~~~~G~G~~~~~~~------- 403 (459)
+ .+|.-+-.||+.. ++..++|++++|-.. .. ..|-.++.+ +|+=+.-...+
T Consensus 84 ~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~iv~p~~g~~f~lac 161 (194)
T 1p3y_1 84 I-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRK-DGHIVIEPVEIMAFEIAT 161 (194)
T ss_dssp E-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHH-HTCEECCCBCCC------
T ss_pred E-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHH-CCCEEECCCCCccccccc
Confidence 4 4666666665442 356789999999632 32 457778887 58744332221
Q ss_pred ----C--CcccHHHHHHHHHHHhCC
Q 012652 404 ----S--GIITGEEISNKLVQVLGD 422 (459)
Q Consensus 404 ----~--~~~~~~~l~~~i~~ll~~ 422 (459)
. .-.+.++|.+.+.+.+.+
T Consensus 162 g~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 162 GTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp ------CBCCCHHHHHHHHHHHCC-
T ss_pred CCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 1 224688999888888854
No 289
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=33.56 E-value=38 Score=30.51 Aligned_cols=34 Identities=18% Similarity=0.349 Sum_probs=27.1
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQ--GHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~--gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.+|++++.++. |+ .+.+|+.|..+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 48999987665 44 378999999999999998653
No 290
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=33.43 E-value=36 Score=30.34 Aligned_cols=37 Identities=5% Similarity=0.125 Sum_probs=28.1
Q ss_pred CEEEEEcCCCccC---HHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGH---VIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH---~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5899988764321 234577999999999999998764
No 291
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=33.42 E-value=71 Score=30.51 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=33.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCCcchHHH
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAK-HGFRVTFVNSEYNHKRV 46 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~-rGh~Vt~~~~~~~~~~v 46 (459)
-+++...++.|=..-++.+|..++. .|..|.|++.+.....+
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~l 247 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQL 247 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHH
Confidence 3567778888999999999999886 68999999987654443
No 292
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=33.37 E-value=1.4e+02 Score=25.17 Aligned_cols=95 Identities=6% Similarity=-0.047 Sum_probs=0.0
Q ss_pred hHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCC----ceeec
Q 012652 263 TCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATR----GQMIG 338 (459)
Q Consensus 263 ~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~n----v~i~~ 338 (459)
++-.++.+.. ..+|+-|. ..-......++....+.++|=+... .-+....+.| ..++.
T Consensus 32 ~lg~~LA~~g---~~lV~GGg----~~GlM~aa~~gA~~~GG~~iGv~p~-----------~l~~~e~~~~~~~~~~~~~ 93 (216)
T 1ydh_A 32 ELGNELVKRK---IDLVYGGG----SVGLMGLISRRVYEGGLHVLGIIPK-----------ALMPIEISGETVGDVRVVA 93 (216)
T ss_dssp HHHHHHHHTT---CEEEECCC----SSHHHHHHHHHHHHTTCCEEEEEEG-----------GGHHHHCCSSCCSEEEEES
T ss_pred HHHHHHHHCC---CEEEECCC----cccHhHHHHHHHHHcCCcEEEEech-----------hcCccccccCCCCcccccC
Q ss_pred ccchhh--hhcCCCccceeeccCchhHHHhh---------hcCCceecc
Q 012652 339 WAPQQR--VLSHPSIACFLSHCGWNSTMEGV---------SNGIPFLCW 376 (459)
Q Consensus 339 ~vpq~~--iL~~~~~~~~I~HgG~~s~~eal---------~~gvP~v~~ 376 (459)
.++... +...++. .++--||.||+-|.. .+++|++++
T Consensus 94 ~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll 141 (216)
T 1ydh_A 94 DMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLL 141 (216)
T ss_dssp SHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred CHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEe
No 293
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=33.31 E-value=50 Score=24.82 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=22.7
Q ss_pred CCccEEEeCCCcc--hHHHHHHH-------cCCceEEEeCcch
Q 012652 106 EKIDCFISDGFMG--WSMEVAEK-------MKLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlvi~D~~~~--~~~~~A~~-------~giP~i~~~~~~~ 139 (459)
.+||+||.|...+ .+..+.+. -++|.+.++....
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 89 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGD 89 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCC
Confidence 7899999997655 34444433 2688887766543
No 294
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=33.26 E-value=46 Score=28.81 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=24.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|.+.|+++++.++.| --.++|++|+++|++|.+...
T Consensus 1 M~~~k~vlVTGas~g---IG~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 1 MEQNKCALVTGSSRG---VGKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp --CCCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEecCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 555567777755442 346789999999999998643
No 295
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=33.17 E-value=33 Score=29.83 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=26.5
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQ--GHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~--gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.+|++++.++. |+ .+.+|+.|+++|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 48998887765 44 37889999999999999864
No 296
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=33.12 E-value=73 Score=25.49 Aligned_cols=48 Identities=8% Similarity=0.078 Sum_probs=35.9
Q ss_pred CCCCEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012652 1 MSSPHILVFS-TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMK 48 (459)
Q Consensus 1 m~~~~il~~~-~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (459)
|++.|+.|+. .+..=-+++.+-||..-+..|++|+++.+..--..+.+
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 6656666555 44557788999999999999999999988665555544
No 297
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=32.86 E-value=1e+02 Score=24.98 Aligned_cols=114 Identities=8% Similarity=0.012 Sum_probs=63.1
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceee---cccchhhhhcCCCc
Q 012652 275 SVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMI---GWAPQQRVLSHPSI 351 (459)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~---~~vpq~~iL~~~~~ 351 (459)
.+++.-.|+.... ....+++.+.+.+..+-.+.+... ..-+.....+...+.++.. .|+++-.+-..+|+
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A----~~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD~ 79 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNG----RKFINGEILKQFCDNYYDEFEDPFLNHVDIANKHDK 79 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGG----GGGSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCSE
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCH----HHHhhHHHHHHhcCCEEecCCCCccccccccchhCE
Confidence 3566666766433 244566777777887777776541 1112222222333322211 34555555555665
Q ss_pred cceeeccCchhHH-------------HhhhcCCceecccccc----cc---chhhhhhhceeeeee
Q 012652 352 ACFLSHCGWNSTM-------------EGVSNGIPFLCWPYFV----DQ---FLNESYICDIWKVGL 397 (459)
Q Consensus 352 ~~~I~HgG~~s~~-------------eal~~gvP~v~~P~~~----DQ---~~na~rv~~~~G~G~ 397 (459)
.+|.-+-.||+. -++..++|++++|.+. +. ..|-.++.+ +|+=+
T Consensus 80 -~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~i 143 (175)
T 3qjg_A 80 -IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVSI 143 (175)
T ss_dssp -EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCEE
T ss_pred -EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCEE
Confidence 466666666544 3467799999999532 22 357777777 57644
No 298
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.79 E-value=55 Score=28.01 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=25.0
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ +.|+++++..+.| --..++++|.++|++|+++...
T Consensus 1 m~l~~k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 1 MRLKDKAVLITGAAHG---IGRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp CTTTTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 44 3355556544432 3567899999999999988754
No 299
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=32.75 E-value=38 Score=30.55 Aligned_cols=33 Identities=12% Similarity=0.238 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.++|++.. +.|.+ -..|+++|.++||+|+.+..
T Consensus 20 ~~~vlVTG--asG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITG--GAGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CCEEEEET--TTSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred CCEEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 46666654 33433 36789999999999999875
No 300
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=32.71 E-value=37 Score=30.89 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++++|++.. +.|-+ -..|+++|.++||+|+.+...
T Consensus 26 ~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 26 QPKVWLITG--VAGFI--GSNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp SCCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 346676664 33433 357899999999999998753
No 301
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=32.44 E-value=32 Score=32.93 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ |||.|+..+..| ..+|..|+++||+|+++...
T Consensus 1 M~-mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp -C-CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CC-CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 53 789988765444 57899999999999988654
No 302
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=32.34 E-value=24 Score=34.26 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+|++|.|+..+..| ..||..|+++||+|+++...
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 778899999877666 46899999999999987653
No 303
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=32.29 E-value=77 Score=23.74 Aligned_cols=62 Identities=10% Similarity=-0.109 Sum_probs=35.3
Q ss_pred cCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 012652 369 NGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGDQNFKARALELKEI 435 (459)
Q Consensus 369 ~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~l~~~ 435 (459)
..+|+|++--..|.......+.. .|+--.+. ..++.++|..+|++++.....++..+++...
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~----KP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~ 132 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLT----KPWHPEQLLSSARNAARMFTLARENERLSLE 132 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35777776544443333333333 24534453 5689999999999998654443333343333
No 304
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=32.18 E-value=1.4e+02 Score=25.17 Aligned_cols=100 Identities=12% Similarity=0.044 Sum_probs=0.0
Q ss_pred hHHHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccch
Q 012652 263 TCLKWLDQQQPKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQ 342 (459)
Q Consensus 263 ~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq 342 (459)
++-.+|.+.+ ...|+-|. ..-......++....+.++|=++... ..+............+...+++
T Consensus 36 ~lg~~LA~~G---~~vVsGGg----~~GiM~aa~~gAl~~GG~tiGVlP~~-------~~~~e~~~~~~~~~~~~~~f~~ 101 (215)
T 2a33_A 36 DLGNELVSRN---IDLVYGGG----SIGLMGLVSQAVHDGGRHVIGIIPKT-------LMPRELTGETVGEVRAVADMHQ 101 (215)
T ss_dssp HHHHHHHHTT---CEEEECCC----SSHHHHHHHHHHHHTTCCEEEEEESS-------CC--------CCEEEEESSHHH
T ss_pred HHHHHHHHCC---CEEEECCC----hhhHhHHHHHHHHHcCCcEEEEcchH-------hcchhhccCCCCceeecCCHHH
Q ss_pred h-hhhcCCCccceeeccCchhHHHhhhc---------CCceecc
Q 012652 343 Q-RVLSHPSIACFLSHCGWNSTMEGVSN---------GIPFLCW 376 (459)
Q Consensus 343 ~-~iL~~~~~~~~I~HgG~~s~~eal~~---------gvP~v~~ 376 (459)
. .++..-+-..++--||.||+-|.... ++|++++
T Consensus 102 Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll 145 (215)
T 2a33_A 102 RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLL 145 (215)
T ss_dssp HHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEe
No 305
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=32.11 E-value=61 Score=28.09 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++++..+. - --..++++|.++||+|+++...
T Consensus 8 k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAAQ-G--IGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC-c--HHHHHHHHHHHCCCEEEEEECC
Confidence 4555554433 2 3467899999999999988754
No 306
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=32.03 E-value=78 Score=31.92 Aligned_cols=96 Identities=13% Similarity=0.026 Sum_probs=52.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc-----------hHHHHhhhhccCCCCCCeEEEecCCCCCCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN-----------HKRVMKSLEGKNYLGEQIRLVSIPDGMEPW 72 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~ 72 (459)
|||+|+..+..| ....++|.++||+|..+.+... .+..++. ++.+...... .
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~---------~ip~~~~~~~-~-- 63 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER---------GIPVYAPDNV-N-- 63 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC--------CCHHHHHHHH---------TCCEECCSCT-T--
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHHc---------CCCEeccCCC-C--
Confidence 578887654322 2335677778999987775432 2223333 5555432210 0
Q ss_pred CCCCChHHHHHHHHHhccHHHHHHHHHHhCCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEeCcch
Q 012652 73 EERTDPGKLIEKVLQVMPGKLEELIEEINGRDDEKIDCFISDGFM-GWSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~pDlvi~D~~~-~~~~~~A~~~giP~i~~~~~~~ 139 (459)
.+.+.+.++. .+||+||.-.+. .-...+-......++-++++..
T Consensus 64 -----------------~~~~~~~l~~------~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~slL 108 (660)
T 1z7e_A 64 -----------------HPLWVERIAQ------LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLL 108 (660)
T ss_dssp -----------------SHHHHHHHHH------HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSST
T ss_pred -----------------cHHHHHHHHh------cCCCEEEEcCcccccCHHHHhcCCCCeEEecCCcC
Confidence 0122333444 789999876552 2334444555666787777743
No 307
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=32.01 E-value=50 Score=29.68 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.++|++.. +.|.+ -..|+++|.++||+|+.+...
T Consensus 11 ~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVTG--ANGFV--ASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEC--CccHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 45666654 33433 356889999999999988764
No 308
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=31.99 E-value=39 Score=30.68 Aligned_cols=35 Identities=17% Similarity=0.063 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++++|++.. +.|.+ -..|+++|.++||+|+.+...
T Consensus 24 ~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITG--VAGFI--GSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 356777664 44444 357899999999999999853
No 309
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=31.96 E-value=2e+02 Score=23.21 Aligned_cols=142 Identities=14% Similarity=0.186 Sum_probs=80.3
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccc
Q 012652 274 KSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIAC 353 (459)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~ 353 (459)
+|.|-|-+||.+ +....++....++..+..+-.-+.. ..-.|+.+.+ ++-..+ -...++
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~S------aHR~p~~~~~----------~~~~a~-~~g~~V-- 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVS------AHRTPEAMFS----------YARGAA-ARGLEV-- 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTCHHHHHH----------HHHHHH-HHTCCE--
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEC------CCCCHHHHHH----------HHHHHH-hCCCCE--
Confidence 445777788654 6677888888888888876544432 2345554321 111110 123334
Q ss_pred eeeccCc----hhHHHhhhcCCceeccccccccchhhh----hhhc-eeeeeee-eecCCCCcccHHHHHHHHHHHhCCH
Q 012652 354 FLSHCGW----NSTMEGVSNGIPFLCWPYFVDQFLNES----YICD-IWKVGLK-LDKDESGIITGEEISNKLVQVLGDQ 423 (459)
Q Consensus 354 ~I~HgG~----~s~~eal~~gvP~v~~P~~~DQ~~na~----rv~~-~~G~G~~-~~~~~~~~~~~~~l~~~i~~ll~~~ 423 (459)
||.=+|. .++..++ .-+|+|.+|...-. .++. -+.+ --|+.+. +.+ .+..++..+.-.|..+ .|+
T Consensus 66 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~-l~G~daLlS~vqmp~GvpVatV~I--~~~~nAa~lAa~Il~~-~d~ 140 (174)
T 3lp6_A 66 IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGR-LDGLDSLLSIVQMPAGVPVATVSI--GGAGNAGLLAVRMLGA-ANP 140 (174)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSS-GGGHHHHHHHHCCCTTCCCEECCT--TCHHHHHHHHHHHHHT-TCH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCC-CCCHHHHHHHhhCCCCCeeEEEEc--CcchHHHHHHHHHHhC-CCH
Confidence 8877664 3555554 67999999975321 2211 1111 0253222 222 2445555555555444 588
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 012652 424 NFKARALELKEITMSSVR 441 (459)
Q Consensus 424 ~~~~~a~~l~~~~~~~~~ 441 (459)
.++++.+.+++..++.+.
T Consensus 141 ~l~~kl~~~r~~~~~~v~ 158 (174)
T 3lp6_A 141 QLRARIVAFQDRLADVVA 158 (174)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998887643
No 310
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=31.87 E-value=37 Score=29.71 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=26.6
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQ--GHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~--gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.+|++++.++. |+ .+.+|+.|.++|++|+++..
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEe
Confidence 47999887655 44 37889999999999999865
No 311
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=31.81 E-value=14 Score=33.03 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++||+|+..++.|- .+|..|.+.||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 36899998777764 5788899999999999865
No 312
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=31.74 E-value=17 Score=31.64 Aligned_cols=35 Identities=9% Similarity=0.146 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC----CEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHG----FRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rG----h~Vt~~~~~ 40 (459)
|+++||.|+..+..|. .+|..|.++| |+|+++...
T Consensus 2 m~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp CSSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeCC
Confidence 7778999998765554 4788888889 899887643
No 313
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=31.74 E-value=40 Score=28.23 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.+||.|+..+..| ..+|..|.++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 4678888755444 5678999999999998754
No 314
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=31.74 E-value=27 Score=32.64 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=29.7
Q ss_pred CCCCEEEEEcCCCccC----HHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGH----VIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH----~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++||+++..+..+- +.....+++.|.+.||+|+.+...
T Consensus 35 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 78 (383)
T 3k3p_A 35 MSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFIT 78 (383)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred ccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEec
Confidence 6788999888664433 357778888898899999998864
No 315
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=31.62 E-value=38 Score=30.82 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.+||.|+..+..| ..+|..|.+.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4789988877666 57889999999999998764
No 316
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=31.45 E-value=42 Score=28.93 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.+||.|+..+..| ..+|+.|++.||+|++....
T Consensus 19 ~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 5788888665544 46799999999999998654
No 317
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=31.43 E-value=92 Score=22.08 Aligned_cols=32 Identities=13% Similarity=0.141 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.+|+++|..+ ......+..|.+.|++|..+..
T Consensus 57 ~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 57 ETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp SEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 4688888443 4577889999999998876644
No 318
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=31.42 E-value=49 Score=27.17 Aligned_cols=39 Identities=15% Similarity=0.271 Sum_probs=28.4
Q ss_pred CCEEEEEcCCC--cc-CHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPA--QG-HVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~--~g-H~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
..+|+|+|.-+ -. -=++...|++.|.++|.+|.|..+|-
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 35677877321 11 22478899999999999999999853
No 319
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=31.39 E-value=70 Score=31.70 Aligned_cols=41 Identities=7% Similarity=0.033 Sum_probs=36.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNH 43 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 43 (459)
+.+|++.+.++..|-....-++..|..+|++|..++..--.
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~ 138 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPA 138 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 56899999999999999999999999999999999865433
No 320
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=31.37 E-value=57 Score=28.64 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=26.8
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ +.|+++++.++.| --.++|++|+++|++|.++...
T Consensus 1 M~l~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 1 MKLTGEVALITGGASG---LGRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp CTTTTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcCCCEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 55 4566777755543 3468899999999999988753
No 321
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=31.36 E-value=43 Score=29.14 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
.|+++++.++.| --.++|++|.++|++|.++....
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCh
Confidence 356666655543 34688999999999999987644
No 322
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=31.30 E-value=55 Score=27.63 Aligned_cols=34 Identities=15% Similarity=0.297 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+|+++++.++.| --.++|++|.++|++|.+....
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456666655442 3468999999999999888754
No 323
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=31.29 E-value=28 Score=33.64 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+++||.|+..+..| ..+|..|.++||+|+++..
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 667889998776655 4578899999999988764
No 324
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=31.23 E-value=43 Score=29.42 Aligned_cols=34 Identities=26% Similarity=0.464 Sum_probs=27.0
Q ss_pred CEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQ--GHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~--gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.+|++++.++. |+ .+.+|+.|.++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEeC
Confidence 48998887765 44 378899999999999998653
No 325
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=31.22 E-value=63 Score=28.21 Aligned_cols=35 Identities=9% Similarity=0.028 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+-|+++++..+.| --.++|++|+++|++|.+..-.
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r~ 44 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTARA 44 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEECC
Confidence 4488899877664 3578999999999999887653
No 326
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=31.02 E-value=61 Score=28.22 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.|.++++.++.| --.++|++|.++|++|.++...
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356666655543 3568999999999999988763
No 327
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=31.02 E-value=80 Score=25.75 Aligned_cols=32 Identities=9% Similarity=-0.071 Sum_probs=18.6
Q ss_pred CCccEEEeCCCcc--hHHHHHHHcCCceEEEeCc
Q 012652 106 EKIDCFISDGFMG--WSMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 106 ~~pDlvi~D~~~~--~~~~~A~~~giP~i~~~~~ 137 (459)
.+.++||+-.--. -...+|.....|+|.+-+.
T Consensus 75 ~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~ 108 (182)
T 1u11_A 75 RGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVE 108 (182)
T ss_dssp TTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEEC
T ss_pred CCCcEEEEecCchhhhHHHHHhccCCCEEEeeCC
Confidence 4456666543322 3345577778888876443
No 328
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=30.99 E-value=27 Score=28.36 Aligned_cols=34 Identities=12% Similarity=0.044 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKH-GFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~r-Gh~Vt~~~~~~ 41 (459)
..||+++..+..| ..+|+.|.++ ||+|+++....
T Consensus 39 ~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECCH
Confidence 4578888543333 5678999999 99999987643
No 329
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=30.93 E-value=51 Score=27.20 Aligned_cols=39 Identities=15% Similarity=0.262 Sum_probs=28.4
Q ss_pred CCEEEEEcCCC--cc-CHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPA--QG-HVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~--~g-H~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
..+|+|+|.-+ -. -=++...|++.|.++|.+|.|..+|-
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 35677877321 12 22478899999999999999999853
No 330
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=30.93 E-value=95 Score=28.57 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=30.8
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012652 6 ILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN 42 (459)
Q Consensus 6 il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~ 42 (459)
++++..++.|=..-++.++..+...|..|.|+..+..
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s 100 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHA 100 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 4566777888888899999999999999999987653
No 331
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=30.76 E-value=1.4e+02 Score=28.24 Aligned_cols=32 Identities=16% Similarity=0.258 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.||+++. .| ...+.+++++++.|++|+++.+.
T Consensus 2 k~ilI~g---~g--~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIAN---RG--EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp CEEEECC---CH--HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred ceEEEeC---CC--HHHHHHHHHHHHcCCEEEEEecc
Confidence 3677664 23 25678999999999999998754
No 332
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=30.74 E-value=71 Score=27.20 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=26.6
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|+ +.|+++++.++.| --..+|++|.++|++|.++....
T Consensus 1 m~l~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~r~~ 39 (247)
T 3lyl_A 1 MSLNEKVALVTGASRG---IGFEVAHALASKGATVVGTATSQ 39 (247)
T ss_dssp CTTTTCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 55 4466666655432 24688999999999998887643
No 333
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=30.71 E-value=68 Score=25.02 Aligned_cols=45 Identities=11% Similarity=0.252 Sum_probs=33.9
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012652 4 PHILVFS-TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMK 48 (459)
Q Consensus 4 ~~il~~~-~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~ 48 (459)
.|++|+. .+..-.+++.+.+|...++.|++|+++.+......+.+
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 3566544 44557788999999999999999999998665545444
No 334
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=30.68 E-value=1.4e+02 Score=28.22 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=23.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.||+++.. | ...+.+++++++.|++|+++.+
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~ 33 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKELGIKTVAVHS 33 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEE
T ss_pred ceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEec
Confidence 46777653 3 3467899999999999998865
No 335
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=30.67 E-value=42 Score=30.56 Aligned_cols=35 Identities=17% Similarity=0.025 Sum_probs=24.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+.++|++.. +.|.+ -..|+++|.++||+|+.+...
T Consensus 8 ~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 8 QGKRVFVTG--HTGFK--GGWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TTCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEC--CCchH--HHHHHHHHHhCCCeEEEEeCC
Confidence 346666654 44444 356789999999999998753
No 336
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=30.48 E-value=37 Score=31.38 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
+..+|+|+..+..| +.+|..|+++|++|+++-.
T Consensus 10 ~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 10 KTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 34678888766444 7788899999999999864
No 337
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=30.45 E-value=41 Score=30.31 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=23.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHG--FRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rG--h~Vt~~~~ 39 (459)
|+.|||++.. +.|-+ -..|+++|.++| |+|+.+..
T Consensus 1 M~~m~vlVTG--atG~i--G~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTG--GMGFI--GSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEET--TTSHH--HHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEEC--CCchH--HHHHHHHHHHhCCCCEEEEEec
Confidence 7777877664 33333 356789999886 99998875
No 338
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.44 E-value=18 Score=30.35 Aligned_cols=34 Identities=12% Similarity=0.078 Sum_probs=25.7
Q ss_pred CCccEE-EeCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 106 EKIDCF-ISDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlv-i~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
..||++ |.|+..- -+..=|.++|||++.++.+.+
T Consensus 110 ~~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DTn~ 145 (202)
T 3j20_B 110 FEPDVLIVTDPRADHQAMREAVEIGIPIVALVDTEN 145 (202)
T ss_dssp CCCSEEEESCTTTSHHHHHHHHHHTCCEEEEECTTC
T ss_pred cCCCeEEEeCCccchHHHHHHHHcCCCEEEEEcCCC
Confidence 469997 4666544 566679999999999887755
No 339
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=30.20 E-value=92 Score=26.61 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=22.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCE-EEEEeCCc
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFR-VTFVNSEY 41 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~-Vt~~~~~~ 41 (459)
|.++++.+ .| .--..+|++|.++|++ |.++....
T Consensus 6 k~vlVtGa-s~--gIG~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 6 KNVIFVAA-LG--GIGLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp CEEEEETT-TS--HHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred cEEEEECC-CC--hHHHHHHHHHHHCCCcEEEEEecCc
Confidence 44444433 34 2357899999999997 87776544
No 340
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=30.17 E-value=98 Score=29.49 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
..||+|+..+..| .++|+.|.++||+|+..-.
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4689999886655 3469999999999999865
No 341
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=30.17 E-value=30 Score=30.99 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+.++|++.. +.|.+ -..|+++|.++||+|+.+..
T Consensus 1 M~~~~ilVtG--atG~i--G~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 1 MAKQRVFIAG--HRGMV--GSAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp -CCEEEEEET--TTSHH--HHHHHHHHTTCTTEEEECCC
T ss_pred CCCCEEEEEC--CCcHH--HHHHHHHHHhCCCeEEEEec
Confidence 6667777664 44444 34678999999999988653
No 342
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=30.05 E-value=63 Score=28.34 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.|+++++.++.| --.++|++|+++|++|.++...
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466677655543 3568999999999999988754
No 343
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=30.01 E-value=69 Score=29.10 Aligned_cols=26 Identities=4% Similarity=-0.019 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHhhCCCCEEEEEcCC
Q 012652 288 DHNQFQELALGLEICNRPFLWVVRPD 313 (459)
Q Consensus 288 ~~~~~~~~~~a~~~~~~~~i~~~~~~ 313 (459)
+.+..+.+.++|.+...+.||...++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 45567889999998888889988665
No 344
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=29.99 E-value=41 Score=30.40 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=24.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|||.|+..+..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 478888766555 4568899999999999876
No 345
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=29.98 E-value=1.8e+02 Score=27.47 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.|||++.. | .....+++++++.|++|.++.+.
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~ 34 (451)
T 1ulz_A 3 NKVLVANR---G--EIAVRIIRACKELGIPTVAIYNE 34 (451)
T ss_dssp SSEEECCC---H--HHHHHHHHHHHHHTCCEEEEECG
T ss_pred ceEEEECC---c--HHHHHHHHHHHHcCCeEEEEech
Confidence 45777652 3 24578999999999999988753
No 346
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=29.88 E-value=52 Score=28.88 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCCCccEEEeCCCcc------hHHHHHHHcCCceEEEeCc
Q 012652 91 GKLEELIEEINGRDDEKIDCFISDGFMG------WSMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 91 ~~~~~l~~~l~~~~~~~pDlvi~D~~~~------~~~~~A~~~giP~i~~~~~ 137 (459)
..+.++++. .+||+||+..... .+..+|..+|+|.++....
T Consensus 102 ~~La~~i~~------~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKK------EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHH------HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHh------cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 345555665 6799999887653 6789999999999986543
No 347
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=29.88 E-value=25 Score=31.42 Aligned_cols=31 Identities=6% Similarity=0.052 Sum_probs=24.5
Q ss_pred hhcCCCccceeeccCchhHHHhhhc----CCceeccc
Q 012652 345 VLSHPSIACFLSHCGWNSTMEGVSN----GIPFLCWP 377 (459)
Q Consensus 345 iL~~~~~~~~I~HgG~~s~~eal~~----gvP~v~~P 377 (459)
+-..+++ +|+-||-||+.+++.. ++|++.++
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 3345566 9999999999999743 78888885
No 348
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=29.86 E-value=72 Score=28.39 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
|+.+||+++... .......+.|.+.||+|.+..
T Consensus 5 ~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 567899888542 356677899999999998764
No 349
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=29.69 E-value=38 Score=32.55 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCcc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEYN 42 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~~ 42 (459)
|++++|+++..+..| +..|..|+++ |++|+++.....
T Consensus 1 M~~~~VvIIGaG~aG-----l~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 1 MSLKHVVVIGAVALG-----PKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp ---CEEEEECCSSHH-----HHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhhCcCCCEEEEECCCc
Confidence 777899998876655 5567778877 999999986543
No 350
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=29.60 E-value=20 Score=31.94 Aligned_cols=35 Identities=9% Similarity=0.085 Sum_probs=26.3
Q ss_pred CCccEEE-eCCCcc-hHHHHHHHcCCceEEEeCcchh
Q 012652 106 EKIDCFI-SDGFMG-WSMEVAEKMKLRRAVIWTSCAA 140 (459)
Q Consensus 106 ~~pDlvi-~D~~~~-~~~~~A~~~giP~i~~~~~~~~ 140 (459)
..||+|| .|+..- -+..=|.++|||+|.++.+.+-
T Consensus 117 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn~d 153 (295)
T 2zkq_b 117 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSP 153 (295)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHHTCCEEEEECTTCC
T ss_pred cCCCeEEEeCCCcchhHHHHHHHhCCCEEEEecCCCC
Confidence 4699885 566543 5667799999999999877653
No 351
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=29.55 E-value=1.7e+02 Score=28.64 Aligned_cols=27 Identities=11% Similarity=0.126 Sum_probs=22.6
Q ss_pred ccceeeccCch------hHHHhhhcCCceeccc
Q 012652 351 IACFLSHCGWN------STMEGVSNGIPFLCWP 377 (459)
Q Consensus 351 ~~~~I~HgG~~------s~~eal~~gvP~v~~P 377 (459)
..+++++.|-| .++||-+.++|+|++-
T Consensus 72 pgv~~~TsGpG~~N~~~gia~A~~d~vPll~it 104 (556)
T 3hww_A 72 PVAVIVTSGTAVANLYPALIEAGLTGEKLILLT 104 (556)
T ss_dssp CEEEEECSSHHHHTTHHHHHHHHHHCCCEEEEE
T ss_pred CEEEEECCCcHHHhhhHHHHHHHHhCCCeEEEe
Confidence 34499999965 7889999999999985
No 352
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=29.49 E-value=57 Score=29.36 Aligned_cols=34 Identities=12% Similarity=0.207 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+|+|++.. +.|.+ -..|+++|.++||+|+.++..
T Consensus 13 ~M~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLG--ATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 35777664 33433 357789999999999998754
No 353
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=29.44 E-value=53 Score=29.90 Aligned_cols=69 Identities=10% Similarity=-0.014 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhhh
Q 012652 289 HNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGVS 368 (459)
Q Consensus 289 ~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal~ 368 (459)
.+.+..+...|+..+..+.+..... +.... .+ -.......+++ +|.-||-||+.|++.
T Consensus 41 ~~~~~~i~~~L~~~g~~~~~~~t~~---------~~~a~----------~~-~~~~~~~~~d~--vvv~GGDGTv~~v~~ 98 (337)
T 2qv7_A 41 KRELPDALIKLEKAGYETSAYATEK---------IGDAT----------LE-AERAMHENYDV--LIAAGGDGTLNEVVN 98 (337)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEECCS---------TTHHH----------HH-HHHHTTTTCSE--EEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEEecC---------cchHH----------HH-HHHHhhcCCCE--EEEEcCchHHHHHHH
Confidence 3556778888877776655544322 11110 00 01122233455 999999999998753
Q ss_pred ------cCCceeccccc
Q 012652 369 ------NGIPFLCWPYF 379 (459)
Q Consensus 369 ------~gvP~v~~P~~ 379 (459)
.++|+.++|..
T Consensus 99 ~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 99 GIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp HHTTCSSCCEEEEEECS
T ss_pred HHHhCCCCCcEEEecCC
Confidence 46899999963
No 354
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=29.23 E-value=34 Score=30.55 Aligned_cols=45 Identities=11% Similarity=0.075 Sum_probs=32.9
Q ss_pred CCEEEEEcCCCcc----CHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012652 3 SPHILVFSTPAQG----HVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVM 47 (459)
Q Consensus 3 ~~~il~~~~~~~g----H~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~ 47 (459)
+|||+++..+-.+ -+.....++++|.++||+|..+........+.
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~ 51 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIE 51 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHHH
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHHH
Confidence 6899988855332 24567788999999999999998865544443
No 355
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=29.08 E-value=58 Score=28.78 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
.|+++++.++.| --.++|++|+++|++|.++....
T Consensus 12 ~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 12 RRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 467777766543 34688999999999999987643
No 356
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=29.07 E-value=70 Score=29.20 Aligned_cols=72 Identities=14% Similarity=0.205 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceeeccCchhHHHhh
Q 012652 288 DHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLSHCGWNSTMEGV 367 (459)
Q Consensus 288 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~HgG~~s~~eal 367 (459)
+.+..+.+.++|.+...+.||...++. .-.++.++++...+-.++.+ ||-+.-...+.-++
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 124 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGM-----------------NSNSLLPYIDYDAFQNNPKI--MIGYSDATALLLGI 124 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHhhhcChhHHhhCCeE--EEEechHHHHHHHH
Confidence 455678899999888888888887651 11234455555555555655 66666666666666
Q ss_pred h--cCCceecccc
Q 012652 368 S--NGIPFLCWPY 378 (459)
Q Consensus 368 ~--~gvP~v~~P~ 378 (459)
+ .|++.+.-|.
T Consensus 125 ~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 125 YAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHCCCEEECCC
T ss_pred HHhcCceEEECCh
Confidence 5 3666555553
No 357
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.07 E-value=1.1e+02 Score=23.72 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=29.8
Q ss_pred CCEEEEEc-CCCccC--HHHHHHHHHHHHhCCCEE-EEEeCCcchHHH
Q 012652 3 SPHILVFS-TPAQGH--VIPLLEFSQCLAKHGFRV-TFVNSEYNHKRV 46 (459)
Q Consensus 3 ~~~il~~~-~~~~gH--~~p~~~La~~L~~rGh~V-t~~~~~~~~~~v 46 (459)
.||++|+- .+-+|+ ..-.+.+|..+.+.||+| .++-..+.....
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a 59 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNA 59 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHH
Confidence 36777444 444444 445678899999999999 888776654443
No 358
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=28.90 E-value=37 Score=32.36 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=27.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKH--GFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~r--Gh~Vt~~~~~~ 41 (459)
|++.+|+++..+..| +..|..|+++ |++|+++....
T Consensus 1 M~~~~VvIIGgG~aG-----l~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAG-----MSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHHCTTSEEEEECSSS
T ss_pred CCcCcEEEECCcHHH-----HHHHHHHHHhCcCCCEEEEECCC
Confidence 778899999876555 5678888876 89999997654
No 359
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=28.81 E-value=33 Score=31.04 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=26.9
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeCCc
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGF-RVTFVNSEY 41 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh-~Vt~~~~~~ 41 (459)
|+ ++||.++..+..|.. +|..|+++|| +|+++....
T Consensus 1 M~~~~kI~VIGaG~~G~~-----ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGN-----IAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHH-----HHHHHHhCCCceEEEEeCCc
Confidence 76 679998876544433 8888999999 988887543
No 360
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=28.81 E-value=34 Score=30.59 Aligned_cols=32 Identities=9% Similarity=0.109 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
++||.|+..+..| ..+|+.|++.||+|+++..
T Consensus 7 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 5789999766555 4689999999999998854
No 361
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=28.75 E-value=68 Score=27.76 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCEEEEEeC
Q 012652 2 SSPHILVFSTPAQ--GHVIPLLE-FSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 2 ~~~~il~~~~~~~--gH~~p~~~-La~~L~~rGh~Vt~~~~ 39 (459)
.++||+++....+ |...-+.. +++.|.+.|++|.++--
T Consensus 33 ~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 33 HRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp SCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3679997775543 55555444 56667778999988764
No 362
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=28.71 E-value=84 Score=28.10 Aligned_cols=39 Identities=10% Similarity=-0.026 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQG-H---VIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~g-H---~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
++||+++..+..+ | +.....++++|.+.||+|..+....
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4688888865332 2 4578899999999999999998543
No 363
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=28.69 E-value=51 Score=25.09 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=22.2
Q ss_pred CCccEEEeCCCcc--hHHHHHHHc---------CCceEEEeCcc
Q 012652 106 EKIDCFISDGFMG--WSMEVAEKM---------KLRRAVIWTSC 138 (459)
Q Consensus 106 ~~pDlvi~D~~~~--~~~~~A~~~---------giP~i~~~~~~ 138 (459)
.+||+||.|...+ .+..+.+.+ .+|.+.++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 7899999997655 355544433 37888776543
No 364
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=28.63 E-value=46 Score=30.98 Aligned_cols=32 Identities=22% Similarity=0.275 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
+.+|+|+..+-.| +.+|..|+++|++|+++-.
T Consensus 5 ~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 5 TDRIAVVGGSISG-----LTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 5689988866444 7789999999999999964
No 365
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=28.61 E-value=45 Score=25.46 Aligned_cols=42 Identities=5% Similarity=0.021 Sum_probs=29.4
Q ss_pred EEEEE-cCCCc--cCHHHHHHHHHHHHhCCCEE-EEEeCCcchHHH
Q 012652 5 HILVF-STPAQ--GHVIPLLEFSQCLAKHGFRV-TFVNSEYNHKRV 46 (459)
Q Consensus 5 ~il~~-~~~~~--gH~~p~~~La~~L~~rGh~V-t~~~~~~~~~~v 46 (459)
|++|+ ..+.+ -.....+.+|..+.+.||+| .++-..+.....
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~ 47 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNS 47 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHH
Confidence 55533 33333 44668899999999999999 888876654443
No 366
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=28.57 E-value=77 Score=27.08 Aligned_cols=35 Identities=14% Similarity=0.255 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+.|+++++..+.| --..+|++|.++|++|.++...
T Consensus 8 ~~k~vlITGas~g---iG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 8 ENKVGIVTGSGGG---IGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3456666654432 3468899999999999988754
No 367
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=28.57 E-value=94 Score=28.16 Aligned_cols=82 Identities=12% Similarity=-0.040 Sum_probs=0.0
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCcc
Q 012652 273 PKSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIA 352 (459)
Q Consensus 273 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~ 352 (459)
.+-.|++.--+-.. +.+..+...++..+..+.+..... .+ -..-+-...+...+++
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~----------~~----------~~~~~~~~~~~~~~d~- 85 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE----------KG----------DAARYVEEARKFGVAT- 85 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS----------TT----------HHHHHHHHHHHHTCSE-
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC----------cc----------hHHHHHHHHHhcCCCE-
Q ss_pred ceeeccCchhHHHhh--------hcCCceeccccc
Q 012652 353 CFLSHCGWNSTMEGV--------SNGIPFLCWPYF 379 (459)
Q Consensus 353 ~~I~HgG~~s~~eal--------~~gvP~v~~P~~ 379 (459)
+|.-||-||+.|++ ..++|+.++|..
T Consensus 86 -vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 86 -VIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp -EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred -EEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
No 368
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=28.55 E-value=2.4e+02 Score=22.93 Aligned_cols=146 Identities=16% Similarity=0.158 Sum_probs=80.1
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccc
Q 012652 274 KSVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIAC 353 (459)
Q Consensus 274 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~ 353 (459)
+|.|-+-+||.. +-...++..+.+++.+..+-..+-.. .-.|+.+.+. +-.. ....+++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~~~----------~~~a---~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEY----------AETA---RERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHH----------HHHT---TTTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHHHH----------HHHH---HhcCceE
Confidence 567888899765 56678888889988888765555432 3445543221 1111 1122334
Q ss_pred eeeccCc----hhHHHhhhcCCceecccccccc---chhhhhhhcee--eeeeee-ecCCCCcccHHHHHHHHHHHhCCH
Q 012652 354 FLSHCGW----NSTMEGVSNGIPFLCWPYFVDQ---FLNESYICDIW--KVGLKL-DKDESGIITGEEISNKLVQVLGDQ 423 (459)
Q Consensus 354 ~I~HgG~----~s~~eal~~gvP~v~~P~~~DQ---~~na~rv~~~~--G~G~~~-~~~~~~~~~~~~l~~~i~~ll~~~ 423 (459)
+|.=.|. .++..+ ..-+|+|.+|....- .+.-.-+.+ + |+.+.- ...+....++.-++..|-. +.|+
T Consensus 81 iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~~d~ 157 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SFHD 157 (181)
T ss_dssp EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-TTCH
T ss_pred EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-cCCH
Confidence 7776663 355544 457899999986432 111112222 2 444322 1100001122223332222 4688
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q 012652 424 NFKARALELKEITMSSVREG 443 (459)
Q Consensus 424 ~~~~~a~~l~~~~~~~~~~~ 443 (459)
+++++.+.+++..++.+.+.
T Consensus 158 ~l~~kl~~~r~~~~~~v~~~ 177 (181)
T 4b4k_A 158 DIHDALELRREAIEKDVREG 177 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999988766543
No 369
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=28.49 E-value=1.2e+02 Score=22.12 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=28.5
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCC
Q 012652 276 VIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPD 313 (459)
Q Consensus 276 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 313 (459)
.||+.|.| +++.+.+++.-+.+.|.+++..++..
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 56776654 88999999999999999999998765
No 370
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=28.46 E-value=50 Score=29.58 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
+.||.|+..+.-|. ++|+.|.++||+|+++..
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 35899999888874 689999999999998753
No 371
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=28.40 E-value=39 Score=30.16 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
..||.|+..+..|+ .+|..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 35788888776665 5888999999999988654
No 372
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=28.39 E-value=84 Score=24.13 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=25.4
Q ss_pred HHHHHHhCCCCCCccEEEeCCCcc--hHHHHHHH-------cCCceEEEeCcc
Q 012652 95 ELIEEINGRDDEKIDCFISDGFMG--WSMEVAEK-------MKLRRAVIWTSC 138 (459)
Q Consensus 95 ~l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~~-------~giP~i~~~~~~ 138 (459)
+.++.+.. .+||+||.|...+ .+..+++. -++|++.++...
T Consensus 42 ~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 42 EAVRFLSL---TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHTT---CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 33444444 7899999997654 34443332 368888776543
No 373
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=28.34 E-value=97 Score=26.36 Aligned_cols=42 Identities=12% Similarity=0.008 Sum_probs=27.3
Q ss_pred HHHHHHhCCCCCCccEEEeCCCcch-------HHHHHHHcCCceEEEeCc
Q 012652 95 ELIEEINGRDDEKIDCFISDGFMGW-------SMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 95 ~l~~~l~~~~~~~pDlvi~D~~~~~-------~~~~A~~~giP~i~~~~~ 137 (459)
.+++.++... .+||+|+.|..... +..+...+|+|+|.+.=+
T Consensus 92 ~~l~al~~L~-~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 92 LFLKAWEKLR-TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHHTTCC-SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHhcC-CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 3444443332 58999999987653 344556679999986543
No 374
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=28.29 E-value=49 Score=24.05 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=23.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHG-FRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rG-h~Vt~~~~~ 40 (459)
+++|+++.. |.+ -..+++.|.++| |+|+++...
T Consensus 5 ~~~v~I~G~---G~i--G~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGA---GKI--GQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECC---SHH--HHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECC---CHH--HHHHHHHHHhCCCceEEEEeCC
Confidence 357777754 333 246899999999 999888764
No 375
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.24 E-value=81 Score=26.62 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=23.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+. |.++++..+.| --..+|++|.++||+|+++...
T Consensus 1 m~~-k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 1 MSS-GKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp -CC-EEEEEETTTSH---HHHHHHHHHHHTTEEEEEEESS
T ss_pred CCC-CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEecC
Confidence 543 44445533332 3468999999999999988754
No 376
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=28.22 E-value=2.9e+02 Score=25.19 Aligned_cols=43 Identities=21% Similarity=0.217 Sum_probs=29.9
Q ss_pred HHHHHHHHhCCCCCCccEEEeCCCcc---hHHHHHHHcCCceEEEeCcc
Q 012652 93 LEELIEEINGRDDEKIDCFISDGFMG---WSMEVAEKMKLRRAVIWTSC 138 (459)
Q Consensus 93 ~~~l~~~l~~~~~~~pDlvi~D~~~~---~~~~~A~~~giP~i~~~~~~ 138 (459)
++++.+.+++ .++|+||.=..-. .+-.+|...++|++.+-++.
T Consensus 76 v~~~~~~~~~---~~~D~IIavGGGs~iD~aK~iA~~~~~p~i~IPTTa 121 (353)
T 3hl0_A 76 TKTAVEAYRA---AGADCVVSLGGGSTTGLGKAIALRTDAAQIVIPTTY 121 (353)
T ss_dssp HHHHHHHHHH---TTCSEEEEEESHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred HHHHHHHHhc---cCCCEEEEeCCcHHHHHHHHHHhccCCCEEEEeCCc
Confidence 4444555554 7899998654433 46667788999999887765
No 377
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=28.19 E-value=59 Score=28.37 Aligned_cols=40 Identities=18% Similarity=0.099 Sum_probs=30.1
Q ss_pred HHHHHHHHHhCCCCCCccEEEeCCCcc------hHHHHHHHcCCceEEEeCc
Q 012652 92 KLEELIEEINGRDDEKIDCFISDGFMG------WSMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 92 ~~~~l~~~l~~~~~~~pDlvi~D~~~~------~~~~~A~~~giP~i~~~~~ 137 (459)
.+.++++. .+||+||+..... .+..+|..+|+|.++....
T Consensus 107 ~La~~i~~------~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 107 VLAKLAEK------EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHH------HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHh------cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 34555555 6799999887653 6789999999999986543
No 378
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=28.18 E-value=35 Score=28.78 Aligned_cols=41 Identities=24% Similarity=0.207 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
|++...+++..+..++..-...+++.|.++|++|..+-...
T Consensus 1 me~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 41 (258)
T 3dqz_A 1 MERKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAA 41 (258)
T ss_dssp --CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTT
T ss_pred CCCCCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCC
Confidence 66433344444544555556789999999999998876543
No 379
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=28.08 E-value=89 Score=26.57 Aligned_cols=28 Identities=21% Similarity=0.183 Sum_probs=21.1
Q ss_pred CCEEEEEcCCCc-c-CHHHHHHHHHHHHhC
Q 012652 3 SPHILVFSTPAQ-G-HVIPLLEFSQCLAKH 30 (459)
Q Consensus 3 ~~~il~~~~~~~-g-H~~p~~~La~~L~~r 30 (459)
++|||+..|.-. | .+||...++++|...
T Consensus 2 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~~ 31 (223)
T 3ro0_A 2 EKKVLLTGFDPFGGETVNPSWEAVKRLNGA 31 (223)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHTTTC
T ss_pred CCEEEEEeCCCCCCCCCChHHHHHHHhccc
Confidence 468888776633 3 579999999999763
No 380
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=28.03 E-value=53 Score=24.16 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEE
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFV 37 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~ 37 (459)
.+||+++|..+.|+-.-.-.+-+.+.++|.++.+-
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~ 38 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIE 38 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEE
Confidence 47899999888877766667778888889876543
No 381
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=27.98 E-value=59 Score=28.29 Aligned_cols=39 Identities=13% Similarity=0.027 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCCCCCCccEEEeCCCcc------hHHHHHHHcCCceEEEeC
Q 012652 92 KLEELIEEINGRDDEKIDCFISDGFMG------WSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 92 ~~~~l~~~l~~~~~~~pDlvi~D~~~~------~~~~~A~~~giP~i~~~~ 136 (459)
.+.++++. .+||+||+..... .+..+|..+|+|.++...
T Consensus 104 ~La~~i~~------~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 104 ILAAVARA------EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHH------HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHh------cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 34555555 5799999877653 678999999999998654
No 382
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=27.92 E-value=49 Score=26.65 Aligned_cols=39 Identities=18% Similarity=0.257 Sum_probs=29.0
Q ss_pred CCEEEEEcCCCc--cC-HHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQ--GH-VIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~--gH-~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
..+|+|+|.-+- .. =++...|++.|.++|.+|.|...|-
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 357888873221 22 2488999999999999999999853
No 383
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=27.78 E-value=86 Score=22.37 Aligned_cols=32 Identities=9% Similarity=0.144 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
..|+++|..+ ......+..|.+.|++|.++..
T Consensus 57 ~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 57 EIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp SEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 4688888543 3466788999999998876644
No 384
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=27.73 E-value=78 Score=27.53 Aligned_cols=37 Identities=11% Similarity=0.158 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|-+.|+++++.++.| --.++|++|.++|++|.++...
T Consensus 1 Ml~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 1 MVMDKVILITGASGG---IGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CCTTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCccH---HHHHHHHHHHHCCCEEEEEECC
Confidence 434466777755542 3468999999999999988754
No 385
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=27.64 E-value=77 Score=24.19 Aligned_cols=53 Identities=11% Similarity=-0.062 Sum_probs=33.3
Q ss_pred hcCCceeccccccccchhhhhhhceee-eeeeeecCCCCcccHHHHHHHHHHHhCCHHHH
Q 012652 368 SNGIPFLCWPYFVDQFLNESYICDIWK-VGLKLDKDESGIITGEEISNKLVQVLGDQNFK 426 (459)
Q Consensus 368 ~~gvP~v~~P~~~DQ~~na~rv~~~~G-~G~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 426 (459)
...+|+|++--..|.......+ + .| +--.+. ..++.++|.++|.+++....+.
T Consensus 74 ~~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~----KP~~~~~L~~~i~~~l~~~~~~ 127 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLN----KPCQMSDIKAAINAGIKQYDLV 127 (151)
T ss_dssp CSSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEE----SSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEc----CCCCHHHHHHHHHHHHHHHHHH
Confidence 3467777775554443333333 3 36 534454 5689999999999999765443
No 386
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=27.60 E-value=38 Score=30.70 Aligned_cols=33 Identities=24% Similarity=0.449 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
..||.|+..+..| ..+|..|+++||+|+++...
T Consensus 6 ~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 4688888766555 47899999999999998654
No 387
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=27.49 E-value=53 Score=27.46 Aligned_cols=41 Identities=15% Similarity=0.062 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCCcc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKH-GFRVTFVNSEYN 42 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~r-Gh~Vt~~~~~~~ 42 (459)
|.+.||+|+.+++...+. ....++.|.++ |++|++++....
T Consensus 1 M~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 1 MSLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp --CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred CCccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 666789988888776554 34667888887 999999998654
No 388
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=27.48 E-value=23 Score=30.75 Aligned_cols=34 Identities=6% Similarity=-0.010 Sum_probs=25.5
Q ss_pred CCccEE-EeCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 106 EKIDCF-ISDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlv-i~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
..||+| |.|+..- -+..=|.++|||+|.++.+.+
T Consensus 116 ~~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial~DTn~ 151 (252)
T 3u5c_A 116 KEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDS 151 (252)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHTTTCCEEEEECTTC
T ss_pred cCCceEEEeCCccchHHHHHHHHcCCCEEEEEcCCC
Confidence 468987 4666543 566668999999999987755
No 389
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=27.36 E-value=88 Score=26.74 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-|+++++.++.| --.++|++|.++|++|.+....
T Consensus 9 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 9 GKVALVTGASRG---IGKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367777765543 3468899999999999888654
No 390
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=27.35 E-value=1.1e+02 Score=26.67 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-|+++++.++.| --.++|++|+++|++|.++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 356666655543 3468999999999999988854
No 391
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=27.35 E-value=55 Score=27.18 Aligned_cols=32 Identities=16% Similarity=0.198 Sum_probs=23.2
Q ss_pred CEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFS-TPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~-~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|||+++. .+..| ..+++.|.++||+|+++...
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 4777775 33333 46789999999999998753
No 392
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=27.32 E-value=90 Score=25.68 Aligned_cols=35 Identities=9% Similarity=0.250 Sum_probs=25.0
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 6 ILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 6 il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+|+..+...+-.....+++.|++.|++|.+++..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 34555545456677788889998899888887643
No 393
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=27.20 E-value=76 Score=27.39 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++++.++.| --..+|++|.++|++|.++...
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECC
Confidence 56666655443 4578899999999999888754
No 394
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=27.20 E-value=59 Score=23.64 Aligned_cols=47 Identities=4% Similarity=0.027 Sum_probs=32.9
Q ss_pred cCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhCC
Q 012652 369 NGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLGD 422 (459)
Q Consensus 369 ~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~~ 422 (459)
..+|++++ -. +......+..+ .|+--.+. ..++.++|.+.|++++..
T Consensus 79 ~~~~ii~~-~~-~~~~~~~~~~~-~g~~~~l~----kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII-GN-PDGFAQHRKLK-AHADEYVA----KPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE-EC-GGGHHHHHHST-TCCSEEEE----SSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE-ec-CCchhHHHHHH-hCcchhee----CCCCHHHHHHHHHHHHcC
Confidence 57899988 33 33444444555 47766665 578999999999998864
No 395
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=27.16 E-value=46 Score=30.09 Aligned_cols=36 Identities=6% Similarity=0.164 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC----CEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHG----FRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rG----h~Vt~~~~~~ 41 (459)
|+++||.|+..+..| ..+|..|.+.| |+|+++....
T Consensus 20 ~~~mkI~iIG~G~mG-----~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLA-----FALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHH-----HHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHH-----HHHHHHHHHCCCCCcceEEEECCCc
Confidence 456789998876555 46788899999 9999887543
No 396
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=27.11 E-value=55 Score=27.71 Aligned_cols=21 Identities=14% Similarity=0.131 Sum_probs=17.6
Q ss_pred HHHHHHHHHhCC-CEEEEEeCC
Q 012652 20 LLEFSQCLAKHG-FRVTFVNSE 40 (459)
Q Consensus 20 ~~~La~~L~~rG-h~Vt~~~~~ 40 (459)
-..|+++|.++| |+|+.+.-.
T Consensus 36 G~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 36 ARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp HHHHHHHHTTCTTEEEEEEESS
T ss_pred HHHHHHHHHhCCCceEEEEEcC
Confidence 367899999999 999998764
No 397
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=27.07 E-value=58 Score=28.96 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
++||.|+..+..|. .+|+.|.+.||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 46899998776664 678999999999998854
No 398
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=27.05 E-value=2.4e+02 Score=22.40 Aligned_cols=135 Identities=16% Similarity=0.169 Sum_probs=76.2
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccceee
Q 012652 277 IYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACFLS 356 (459)
Q Consensus 277 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~I~ 356 (459)
|-+-+||.+ +....++....++..+..+-.-+-+ ..-.|+.+.+.. -+. ..++ +|.
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~s------aHR~p~~~~~~~----------~~a----~~~V--iIa 57 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVAS------AHRTPELVEEIV----------KNS----KADV--FIA 57 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC------TTTCHHHHHHHH----------HHC----CCSE--EEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEc------ccCCHHHHHHHH----------Hhc----CCCE--EEE
Confidence 445567543 6677888888888888875444432 244555432211 100 1134 777
Q ss_pred ccCc----hhHHHhhhcCCceeccccccccchhhh--h--hhc-eeeeee-eeecCCCCcccHHHHHHHHHHHhCCHHHH
Q 012652 357 HCGW----NSTMEGVSNGIPFLCWPYFVDQFLNES--Y--ICD-IWKVGL-KLDKDESGIITGEEISNKLVQVLGDQNFK 426 (459)
Q Consensus 357 HgG~----~s~~eal~~gvP~v~~P~~~DQ~~na~--r--v~~-~~G~G~-~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 426 (459)
=+|. .++..++ .-+|+|.+|... ..++. . +.+ --|+.+ .+.+ .+..++..+...|. -+.|++++
T Consensus 58 ~AG~aa~Lpgvva~~-t~~PVIgVP~~~--~l~G~daLlS~vqmP~gvpVatV~I--~~~~nAa~lA~~Il-~~~d~~l~ 131 (157)
T 2ywx_A 58 IAGLAAHLPGVVASL-TTKPVIAVPVDA--KLDGLDALLSSVQMPPGIPVATVGI--DRGENAAILALEIL-ALKDENIA 131 (157)
T ss_dssp EEESSCCHHHHHHTT-CSSCEEEEEECS--SGGGHHHHHHHHSCCTTSCCEECCT--TCHHHHHHHHHHHH-TTTCHHHH
T ss_pred EcCchhhhHHHHHhc-cCCCEEEecCCC--ccCcHHHHHHHhcCCCCCeeEEEec--CCcHHHHHHHHHHH-hcCCHHHH
Confidence 6664 3444444 478999999822 22221 1 122 015332 2222 24556666665555 45689999
Q ss_pred HHHHHHHHHHHhhhh
Q 012652 427 ARALELKEITMSSVR 441 (459)
Q Consensus 427 ~~a~~l~~~~~~~~~ 441 (459)
++.+..++..++.+.
T Consensus 132 ~kl~~~r~~~~~~v~ 146 (157)
T 2ywx_A 132 KKLIEYREKMKKKVY 146 (157)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887643
No 399
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=27.05 E-value=1.2e+02 Score=25.87 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+-|+++++.++.| --.++|++|.++|++|.++...
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCC
Confidence 3467777766654 4578999999999999987543
No 400
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=27.03 E-value=70 Score=27.94 Aligned_cols=34 Identities=18% Similarity=0.074 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-|+++++.++.| --.++|++|+++|++|.++...
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777766554 3568999999999999887653
No 401
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=26.91 E-value=1e+02 Score=22.58 Aligned_cols=34 Identities=21% Similarity=0.048 Sum_probs=20.5
Q ss_pred CCccEEEeCCCcc--hHHHHHHH-----cCCceEEEeCcch
Q 012652 106 EKIDCFISDGFMG--WSMEVAEK-----MKLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlvi~D~~~~--~~~~~A~~-----~giP~i~~~~~~~ 139 (459)
.+||+||.|...+ .+..+.+. -++|.+.++....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~ 90 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATEN 90 (130)
T ss_dssp CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCC
Confidence 7899999997644 23333322 3588887766543
No 402
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=26.82 E-value=81 Score=27.33 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-|+++++.++.| --.++|++|.++|++|.++...
T Consensus 10 ~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 10 GKTALVTGSTAG---IGKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367777755543 3467899999999999988754
No 403
>3o3m_A Alpha subunit 2-hydroxyisocaproyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_A* 3o3o_A
Probab=26.81 E-value=2.3e+02 Score=26.49 Aligned_cols=111 Identities=12% Similarity=0.019 Sum_probs=59.4
Q ss_pred cCHHHHHHHHHHHHhC------------CCEEEEEeCCc---ch---HHHHhhhhccCCCCCCeEEEe--cCCCCCCCCC
Q 012652 15 GHVIPLLEFSQCLAKH------------GFRVTFVNSEY---NH---KRVMKSLEGKNYLGEQIRLVS--IPDGMEPWEE 74 (459)
Q Consensus 15 gH~~p~~~La~~L~~r------------Gh~Vt~~~~~~---~~---~~v~~~~~~~~~~~~~~~~~~--i~~~~~~~~~ 74 (459)
-|..-+-.|.++|.+| +++|.+.+.+. .. +.+++. |..+.. +..++.....
T Consensus 229 ~~~~~~~~l~~el~~r~~~g~~~~~~~~~~Ril~~G~p~~~~~~~l~~~le~~---------G~~vV~~~~~~~~~~~~~ 299 (408)
T 3o3m_A 229 ETTEAFKLLIEELEDNMKTGKSSFRGEEKYRIMMEGIPCWPYIGYKMKTLAKF---------GVNMTGSVYPHAWALQYE 299 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSSCSCCCEEEEEESCCCGGGHHHHHHHHHHH---------TEEEEECSGGGTTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCCceEEEECCCCcccHHHHHHHHHhC---------CCEEEEEEccchhhccCC
Confidence 3444455666666543 57888887752 22 234444 444332 2222211112
Q ss_pred CCChHHHHHHHHHh-c----cHHHHHHHHHHhCCCCCCccEEEeCCCcchHH----------HHHHHcCCceEEEeCc
Q 012652 75 RTDPGKLIEKVLQV-M----PGKLEELIEEINGRDDEKIDCFISDGFMGWSM----------EVAEKMKLRRAVIWTS 137 (459)
Q Consensus 75 ~~~~~~~~~~~~~~-~----~~~~~~l~~~l~~~~~~~pDlvi~D~~~~~~~----------~~A~~~giP~i~~~~~ 137 (459)
..++..+.+.+... | ...++.+.+.+++ .+.|.||.-....|-. .+.+..|||++.+..-
T Consensus 300 ~~~l~~lA~~y~~~~~~~~~~~r~~~i~~~~~~---~~~DGvI~~~~~~C~~~~~~~~~~~~~~~~~~gIP~l~ie~D 374 (408)
T 3o3m_A 300 VNDLDGMAVAYSTMFNNVNLDRMTKYRVDSLVE---GKCDGAFYHMNRSCKLMSLIQYEMQRRAAEETGLPYAGFDGD 374 (408)
T ss_dssp TTCHHHHHHHHHTSGGGBCHHHHHHHHHHHHHH---TTCSEEEEEEESSCHHHHTTHHHHHHHHHHHHCCCEEEEEEC
T ss_pred chhHHHHHHHHHhcCccCChHHHHHHHHHHHHH---cCCCEEEEecCCCCcccHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 22355555554432 1 2345555555555 8999999766555533 2236689999987654
No 404
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=26.77 E-value=1.3e+02 Score=26.24 Aligned_cols=41 Identities=10% Similarity=0.196 Sum_probs=27.4
Q ss_pred CEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012652 4 PHILVFSTPAQ-GHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRV 46 (459)
Q Consensus 4 ~~il~~~~~~~-gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v 46 (459)
-|+++++.++. +-+ -.++|++|.++|++|.++......+.+
T Consensus 26 ~k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~~~~~~~ 67 (280)
T 3nrc_A 26 GKKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVGQFKDRV 67 (280)
T ss_dssp TCEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECTTCHHHH
T ss_pred CCEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCchHHHHH
Confidence 35666665431 223 467999999999999998865533333
No 405
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=26.74 E-value=1.2e+02 Score=23.07 Aligned_cols=44 Identities=27% Similarity=0.182 Sum_probs=28.2
Q ss_pred HHHHHHHHhCCCCCCccEEEeCCCcc--hHHHHHHH-----cCCceEEEeCcch
Q 012652 93 LEELIEEINGRDDEKIDCFISDGFMG--WSMEVAEK-----MKLRRAVIWTSCA 139 (459)
Q Consensus 93 ~~~l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~~-----~giP~i~~~~~~~ 139 (459)
..+.++.+.. .+||+||.|.... .+..+.+. -++|++.++....
T Consensus 55 ~~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 55 GQEAIQLLEK---ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHHHTT---SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHHhhc---cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 3455666665 7899999997654 34443432 3688887766543
No 406
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=26.73 E-value=51 Score=30.09 Aligned_cols=35 Identities=23% Similarity=0.466 Sum_probs=27.4
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ ..+|+++..+..| +.+|.+|+++|++|+++-..
T Consensus 3 m~~~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIG-----LSSALILARKGYSVHILARD 38 (363)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEecc
Confidence 44 5688888877555 67888999999999999754
No 407
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=26.68 E-value=96 Score=22.58 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=22.2
Q ss_pred CCccEEEeCCCcc--hHHHHHHH-----cCCceEEEeCcch
Q 012652 106 EKIDCFISDGFMG--WSMEVAEK-----MKLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlvi~D~~~~--~~~~~A~~-----~giP~i~~~~~~~ 139 (459)
.+||+||.|...+ .+..+.+. -++|.+.++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 7899999997654 34443333 3688887766543
No 408
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=26.67 E-value=53 Score=27.78 Aligned_cols=34 Identities=15% Similarity=0.365 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGF--RVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh--~Vt~~~~~ 40 (459)
.++|++.. +.|-+ -..++++|.++|| +|+.+...
T Consensus 18 ~~~vlVtG--asg~i--G~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 18 NKSVFILG--ASGET--GRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp CCEEEEEC--TTSHH--HHHHHHHHHHHTCCSEEEEEESS
T ss_pred CCeEEEEC--CCcHH--HHHHHHHHHcCCCCCEEEEEEcC
Confidence 34555553 33333 4678999999999 99998754
No 409
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=26.66 E-value=16 Score=31.58 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=25.5
Q ss_pred CCccEEE-eCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 106 EKIDCFI-SDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlvi-~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
..||+|| .|+..- -+..=|.++|||+|.+..+.+
T Consensus 113 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn~ 148 (241)
T 2xzm_B 113 EEPRVLIVTDPRSDFQAIKEASYVNIPVIALCDSDS 148 (241)
T ss_dssp CCCSEEEESCTTTTHHHHHHHTTTTCCEEECCCSSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHhCCCEEEEecCCC
Confidence 5699985 565533 566779999999999877655
No 410
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=26.65 E-value=74 Score=27.79 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-|+++++.++.| --.++|++|+++|++|.++...
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeCC
Confidence 367777765543 3568899999999999988753
No 411
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=26.61 E-value=37 Score=30.61 Aligned_cols=33 Identities=6% Similarity=0.044 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGF-RVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh-~Vt~~~~~ 40 (459)
.+||.|+..+..| ..+|+.|++.|| +|+++...
T Consensus 24 ~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 5789998776555 478999999999 99988764
No 412
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=26.59 E-value=1.1e+02 Score=26.38 Aligned_cols=36 Identities=14% Similarity=0.042 Sum_probs=28.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN 42 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~ 42 (459)
-|+++++.++.| --.++|+.|++.|.+|.+......
T Consensus 9 GKvalVTGas~G---IG~aiA~~la~~Ga~Vvi~~r~~~ 44 (247)
T 4hp8_A 9 GRKALVTGANTG---LGQAIAVGLAAAGAEVVCAARRAP 44 (247)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCEEEEeCcCCH---HHHHHHHHHHHcCCEEEEEeCCcH
Confidence 488999977764 457899999999999998876543
No 413
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.59 E-value=77 Score=27.30 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=24.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++++.++.| --.++|++|.++|++|.++...
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 66666655543 3468999999999999988754
No 414
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=26.48 E-value=66 Score=28.93 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=23.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+++|++.. +.|-+ -..|+++|.++||+|+.+...
T Consensus 21 ~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 21 MKKVFITG--ICGQI--GSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeC--CccHH--HHHHHHHHHHCCCEEEEEECC
Confidence 45666654 33332 357889999999999998754
No 415
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=26.34 E-value=98 Score=26.59 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++|.++++.++.| --.++|++|.++|++|.++...
T Consensus 6 ~~k~vlVTGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTKG---LGKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCch---hHHHHHHHHHHCCCEEEEEcCC
Confidence 4577777755442 2468999999999999988654
No 416
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=26.34 E-value=77 Score=26.16 Aligned_cols=38 Identities=11% Similarity=0.145 Sum_probs=27.1
Q ss_pred CCEEEEEcCCC-c--cCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPA-Q--GHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~-~--gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+++|.+++... . -+..-...|++.|+++|+.|.+-..+
T Consensus 13 ~~~I~Vfg~s~~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 13 RWTVAVYCAAAPTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp CCEEEEECCSSCCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CeEEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 57888887654 1 23456788889999999987776543
No 417
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=26.33 E-value=64 Score=28.23 Aligned_cols=33 Identities=12% Similarity=0.245 Sum_probs=24.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++++..+.| + -..+|++|+++|++|+++...
T Consensus 22 k~vlVTGas~g-I--G~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGATSG-F--GEACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTTTS-S--HHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 56666654443 3 467899999999999988754
No 418
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=26.29 E-value=1e+02 Score=26.09 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=23.2
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+.. +++++.++.| --.++|++|.++|++|.++...
T Consensus 1 Ms~k-~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 1 MSLG-HIIVTGAGSG---LGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp --CC-EEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCC-EEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 5443 4445544332 3468899999999999988754
No 419
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=26.22 E-value=77 Score=27.91 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=27.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-|+++++.++.| --.++|++|++.|.+|.+....
T Consensus 29 gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 29 AKIAVITGATSG---IGLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 389999977775 4578999999999999887653
No 420
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=26.18 E-value=81 Score=28.23 Aligned_cols=39 Identities=18% Similarity=0.239 Sum_probs=24.7
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+ +.+||++...-.=-...+-.....|+++|++|++++-
T Consensus 1 m~~~~~vL~v~AHPDDe~l~~ggtla~~~~~G~~V~vv~l 40 (303)
T 1q74_A 1 MSETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTC 40 (303)
T ss_dssp --CCCEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCeEEEEEeCCchHHHhHHHHHHHHHHCCCcEEEEEE
Confidence 55 5678766544443344455666677788999999974
No 421
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=26.18 E-value=1e+02 Score=27.67 Aligned_cols=73 Identities=14% Similarity=0.293 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhc-CCCccceeeccCchhHHH
Q 012652 287 LDHNQFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLS-HPSIACFLSHCGWNSTME 365 (459)
Q Consensus 287 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~-~~~~~~~I~HgG~~s~~e 365 (459)
.+.+..+.+.++|.+...+.||...+.. .-.++.++++...+-. ++.+ ||-+.-...+.-
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGy-----------------ga~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~~ 124 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGY-----------------GCGQLLPGLDWGRLQAASPRP--LIGFSDISVLLS 124 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSS-----------------CGGGGTTTCCHHHHHHSCCCC--EEECGGGHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCc-----------------CHHHHhhccchhhhhccCCCE--EEEEchhHHHHH
Confidence 3556678888999888888888887651 1133556666666665 7777 888888888888
Q ss_pred hhh-cCCceecccc
Q 012652 366 GVS-NGIPFLCWPY 378 (459)
Q Consensus 366 al~-~gvP~v~~P~ 378 (459)
+++ .|++.+.-|.
T Consensus 125 al~~~G~~t~hGp~ 138 (311)
T 1zl0_A 125 AFHRHGLPAIHGPV 138 (311)
T ss_dssp HHHHTTCCEEECCC
T ss_pred HHHHcCCcEEECHh
Confidence 876 3777766664
No 422
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=26.17 E-value=48 Score=28.76 Aligned_cols=30 Identities=10% Similarity=0.050 Sum_probs=22.8
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
|||.|+..+..|. .+|+.|.+.||+|++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeC
Confidence 4788886655553 57899999999999853
No 423
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=26.15 E-value=1e+02 Score=25.50 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=26.4
Q ss_pred CCEEEEEcCCC---c----cCHHHHHHHHHHHHhCCCEEEEE
Q 012652 3 SPHILVFSTPA---Q----GHVIPLLEFSQCLAKHGFRVTFV 37 (459)
Q Consensus 3 ~~~il~~~~~~---~----gH~~p~~~La~~L~~rGh~Vt~~ 37 (459)
+.+|.+++... . -...-...|++.|+++|+.|..-
T Consensus 23 m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVsG 64 (195)
T 1rcu_A 23 MKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNG 64 (195)
T ss_dssp CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEeC
Confidence 34688887542 2 45678999999999999988773
No 424
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=26.14 E-value=1.9e+02 Score=24.93 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=30.2
Q ss_pred cHHHHHHHHHHhCCCCCCccEEEeCCCcc---hHHHHHHHcCCceEE
Q 012652 90 PGKLEELIEEINGRDDEKIDCFISDGFMG---WSMEVAEKMKLRRAV 133 (459)
Q Consensus 90 ~~~~~~l~~~l~~~~~~~pDlvi~D~~~~---~~~~~A~~~giP~i~ 133 (459)
....+.+++.+++ ..+.+.|.... .+..+|+.+|+|++.
T Consensus 114 ~~~m~~vm~~l~~-----~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVKE-----KNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHH-----TTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHH-----CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 4456677777765 35999998753 688999999999997
No 425
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=26.11 E-value=88 Score=27.58 Aligned_cols=33 Identities=12% Similarity=0.001 Sum_probs=23.5
Q ss_pred CEEEEEcCCC-ccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 4 PHILVFSTPA-QGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 4 ~~il~~~~~~-~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
-|+++++..+ .|- --.++|++|+++|++|.++.
T Consensus 8 ~k~~lVTGas~~~G--IG~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 8 GKRAFIAGIADDNG--YGWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp TCEEEEECCSSSSS--HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCCCCC--hHHHHHHHHHHCCCeEEEee
Confidence 3566666554 132 34678999999999998875
No 426
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=26.10 E-value=12 Score=31.81 Aligned_cols=34 Identities=12% Similarity=0.085 Sum_probs=25.9
Q ss_pred CCccEE-EeCCCcc-hHHHHHHHcCCceEEEeCcch
Q 012652 106 EKIDCF-ISDGFMG-WSMEVAEKMKLRRAVIWTSCA 139 (459)
Q Consensus 106 ~~pDlv-i~D~~~~-~~~~~A~~~giP~i~~~~~~~ 139 (459)
..||+| |.|+..- -+..=|.++|||+|.+..+.+
T Consensus 148 ~~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn~ 183 (218)
T 3r8n_B 148 GLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNS 183 (218)
T ss_dssp SCCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSSS
T ss_pred cCCCeEEecCcccccHHHHHHHHhCCCEEEEEeCcC
Confidence 479986 5776544 566679999999999887755
No 427
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=26.00 E-value=3e+02 Score=27.06 Aligned_cols=79 Identities=10% Similarity=0.043 Sum_probs=46.9
Q ss_pred HHHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccc-hh---------hhhcCCCccceeeccCc
Q 012652 291 QFQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAP-QQ---------RVLSHPSIACFLSHCGW 360 (459)
Q Consensus 291 ~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vp-q~---------~iL~~~~~~~~I~HgG~ 360 (459)
..+.+++.|++.|.+.|+.+.+. ...++-+.+.+ .+.++.+.-.. |. .+-..+ .+++++.|-
T Consensus 13 ~a~~lv~~L~~~GV~~vFg~PG~----~~~~l~dal~~--~~~i~~i~~~hE~~Aa~aAdGyAr~tG~p--gv~~~TsGp 84 (578)
T 3lq1_A 13 YLAAFIEELVQAGVKEAIISPGS----RSTPLALMMAE--HPILKIYVDVDERSAGFFALGLAKASKRP--VVLLCTSGT 84 (578)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCT----TTHHHHHHHHH--CSSCEEEECSSHHHHHHHHHHHHHHHCCC--EEEEECSSH
T ss_pred HHHHHHHHHHHcCCCEEEECCCC----ccHHHHHHHHh--CCCceEEEecCcHHHHHHHHHHHHhhCCC--EEEEECCch
Confidence 35567788888888888777654 11111122211 12344433222 11 122333 449999996
Q ss_pred h------hHHHhhhcCCceeccc
Q 012652 361 N------STMEGVSNGIPFLCWP 377 (459)
Q Consensus 361 ~------s~~eal~~gvP~v~~P 377 (459)
| .+.||-+.++|+|++.
T Consensus 85 G~~N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 85 AAANYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp HHHTTHHHHHHHHHTTCCEEEEE
T ss_pred hhhhhhHHHHHHHhcCCCeEEEe
Confidence 5 7889999999999985
No 428
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=25.99 E-value=38 Score=30.81 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=26.6
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+ ..+|+++..+..| +..|..|+++|++|+++-..
T Consensus 1 M~~~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 1 MSTDIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp --CCEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCcCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 54 4678888776555 77889999999999999764
No 429
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=25.98 E-value=63 Score=28.47 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=23.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
++||.|+..+..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 46898887666664 46888999999998775
No 430
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=25.96 E-value=1.1e+02 Score=23.41 Aligned_cols=43 Identities=23% Similarity=0.240 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCCCccEEEeCCCcc--hHHHHHHHc-----CCceEEEeCcc
Q 012652 93 LEELIEEINGRDDEKIDCFISDGFMG--WSMEVAEKM-----KLRRAVIWTSC 138 (459)
Q Consensus 93 ~~~l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~~~-----giP~i~~~~~~ 138 (459)
..+.+..+.. .+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 40 ~~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 40 PLDALEALKG---TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHHTT---SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
No 431
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=25.89 E-value=55 Score=28.28 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=31.7
Q ss_pred CCEEEEEc--CCCccCHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012652 3 SPHILVFS--TPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYNH 43 (459)
Q Consensus 3 ~~~il~~~--~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~~ 43 (459)
++|++.+. -++.|=..-...||..|+++|++|.++-.+...
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~~ 47 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQG 47 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 55666444 345588889999999999999999999876543
No 432
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=25.88 E-value=93 Score=26.53 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=22.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+++++..+ |- --..+|++|+++|++|+++..
T Consensus 2 k~vlVTGas-~g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCA-TG--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 445555443 32 346789999999999998765
No 433
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=25.85 E-value=71 Score=28.02 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.|+++++.++.| --.++|++|+++|++|.++..
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 366667655543 346899999999999998765
No 434
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=25.83 E-value=54 Score=27.62 Aligned_cols=33 Identities=12% Similarity=0.205 Sum_probs=23.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++++.++.| --.++|++|.++|++|.++...
T Consensus 2 k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 2 SLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp -CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 55566644432 3468899999999999888754
No 435
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1
Probab=25.79 E-value=78 Score=28.36 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=29.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.+|++++--+. -+..-+-|++.|.++|++|++..-
T Consensus 165 ~~v~~v~DNaG-Eiv~Dlll~~~Ll~~g~~V~~~vK 199 (300)
T 2ffj_A 165 GKVVYLTDNAG-EIFFDTLLMKEIKRRCEKLTAVVR 199 (300)
T ss_dssp SEEEEECCBTT-HHHHHHHHHHHHHTTCSEEEEEEB
T ss_pred CCEEEEecCCc-cHHHHHHHHHHHHHcCCeEEEEEC
Confidence 47888886666 677777799999999999999874
No 436
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=25.72 E-value=81 Score=23.59 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=21.8
Q ss_pred CCccEEEeCCCcc--hHHHHHHHc-------CCceEEEeCcc
Q 012652 106 EKIDCFISDGFMG--WSMEVAEKM-------KLRRAVIWTSC 138 (459)
Q Consensus 106 ~~pDlvi~D~~~~--~~~~~A~~~-------giP~i~~~~~~ 138 (459)
.+||+||.|...+ .+..+.+.+ .+|.+.++...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 87 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKP 87 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCC
Confidence 6899999997654 344444332 57888776543
No 437
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=25.62 E-value=86 Score=26.85 Aligned_cols=32 Identities=9% Similarity=-0.012 Sum_probs=24.2
Q ss_pred CCccEEEeCCCcch-------HHHHHHHcCCceEEEeCc
Q 012652 106 EKIDCFISDGFMGW-------SMEVAEKMKLRRAVIWTS 137 (459)
Q Consensus 106 ~~pDlvi~D~~~~~-------~~~~A~~~giP~i~~~~~ 137 (459)
.+||+|++|..-.. +..+...+|+|+|-+.=+
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 144 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKN 144 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESS
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeecc
Confidence 68999999987552 556677789999986433
No 438
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=25.53 E-value=64 Score=28.44 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+||.|+..+..| ..+|+.|.++||+|+++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 578888765544 56789999999999987653
No 439
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=25.47 E-value=86 Score=26.68 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|.++++.++ |- --..++++|.++|++|+++...
T Consensus 12 k~vlITGas-gg--iG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGAG-SG--IGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 455555333 32 3468899999999999998764
No 440
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=25.41 E-value=37 Score=31.25 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
..+|+++..+..| +.+|.+|+++|++|+++-...
T Consensus 5 ~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCCC
Confidence 4578888766555 778999999999999997653
No 441
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=25.34 E-value=32 Score=30.60 Aligned_cols=35 Identities=6% Similarity=0.006 Sum_probs=26.2
Q ss_pred CCccEEE-eCCCcc-hHHHHHHHcCCceEEEeCcchh
Q 012652 106 EKIDCFI-SDGFMG-WSMEVAEKMKLRRAVIWTSCAA 140 (459)
Q Consensus 106 ~~pDlvi-~D~~~~-~~~~~A~~~giP~i~~~~~~~~ 140 (459)
..||+|| .|+..- -+..=|.++|||+|.++.+.+-
T Consensus 121 ~ePdllvV~Dp~~d~qAI~EA~~lnIPtIALvDTnsd 157 (305)
T 3iz6_A 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSP 157 (305)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHHTCCEEEEECTTSC
T ss_pred cCCceeEEeCcccchHHHHHHHHcCCCEEEEEcCCCC
Confidence 4689874 666543 5666789999999999877664
No 442
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=25.26 E-value=79 Score=27.78 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.|+++++.++.| --.++|++|+++|++|.++...
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 466777755543 3578999999999999988754
No 443
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=25.20 E-value=86 Score=27.38 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-|+++++.++.| --.++|++|.++|++|.++...
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEccc
Confidence 366777755543 3568999999999999988653
No 444
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=25.17 E-value=1e+02 Score=25.51 Aligned_cols=39 Identities=8% Similarity=0.094 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCccCHHHHHH-HHHHHHhCCCEEEEEeCCc
Q 012652 3 SPHILVFSTPAQGHVIPLLE-FSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~-La~~L~~rGh~Vt~~~~~~ 41 (459)
++||+++-....|+..-+.. +++.|.+.|++|.++.-..
T Consensus 6 mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 6 PVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 57898777666787665544 4666777899998886533
No 445
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=25.15 E-value=77 Score=27.99 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=24.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
+||.|+..+..|. .+|+.|.+.||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 6899998766664 468889999999987754
No 446
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=25.14 E-value=81 Score=27.82 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=24.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
.|+++++..+.| --..+|++|+++|++|+++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 367777755543 45689999999999999987
No 447
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=25.14 E-value=88 Score=25.88 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=28.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
.++++..+..|+-.....+++.|+++|+.|..+-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 46666667777778889999999999999988765
No 448
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=25.10 E-value=31 Score=31.18 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|++.+|+++..+..| +..|..|+++|++|+++...
T Consensus 1 m~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSG-----LSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp CEEEEEEEECCSHHH-----HHHHHHHHHSSCCEEEECCS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 666678888766544 67788999999999999754
No 449
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=25.09 E-value=86 Score=26.96 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=24.8
Q ss_pred CCCEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCC
Q 012652 2 SSPHILVFSTPAQGHVIPLLEFSQCLAK-HGFRVTFVNSE 40 (459)
Q Consensus 2 ~~~~il~~~~~~~gH~~p~~~La~~L~~-rGh~Vt~~~~~ 40 (459)
.+.|.++++.++ |-+ -..+++.|.+ +|++|+++...
T Consensus 2 ~~~k~vlITGas-ggI--G~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 2 SGIHVALVTGGN-KGI--GLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCCEEEESSCS-SHH--HHHHHHHHHHHSSSEEEEEESS
T ss_pred CCCCEEEEeCCC-cHH--HHHHHHHHHHhcCCeEEEEeCC
Confidence 344555666443 333 4678999999 99999998764
No 450
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=25.04 E-value=90 Score=26.91 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+-|+++++..+.+ ----.++|+.|+++|++|.+....
T Consensus 5 ~gK~alVTGaa~~-~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 5 ENKTYVIMGIANK-RSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp TTCEEEEECCCST-TCHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHHCCCEEEEEECC
Confidence 5577888764321 112478999999999999988754
No 451
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=25.04 E-value=1.1e+02 Score=27.89 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=23.0
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhCCCCEEEEEc
Q 012652 275 SVIYVAFGSHTVLDHNQFQELALGLEICNRPFLWVVR 311 (459)
Q Consensus 275 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 311 (459)
.+++++.|+.+ .-.....++++|.+.|+++.+...
T Consensus 6 ~il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHG--HVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcC
Confidence 36777776432 223455678888888888887764
No 452
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.96 E-value=85 Score=30.28 Aligned_cols=35 Identities=17% Similarity=0.112 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhC-CC-EEEEEeCCcc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKH-GF-RVTFVNSEYN 42 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~r-Gh-~Vt~~~~~~~ 42 (459)
.+||.++..+..| ..+|..|+++ || +|+++.....
T Consensus 18 ~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 5799999887777 5789999999 99 9999875443
No 453
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=24.92 E-value=74 Score=23.46 Aligned_cols=36 Identities=11% Similarity=0.016 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~ 38 (459)
++||+++|..+.|--.-.-.+-+...++|.+|.+..
T Consensus 6 ~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 6 ELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp CEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 679999887776444433444445556798888854
No 454
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=24.82 E-value=1.2e+02 Score=25.52 Aligned_cols=21 Identities=19% Similarity=0.148 Sum_probs=17.6
Q ss_pred HHHHHHHHHhCCCEEEEEeCC
Q 012652 20 LLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 20 ~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-..++++|.++|++|+++...
T Consensus 20 G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 20 GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp HHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999999988754
No 455
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=24.78 E-value=1e+02 Score=26.67 Aligned_cols=33 Identities=6% Similarity=0.027 Sum_probs=25.5
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
-|+++++.++.| --.++|++|+++|++|.++..
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 367777766654 357899999999999998864
No 456
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=24.75 E-value=2.6e+02 Score=24.52 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=32.8
Q ss_pred cHHHHHHHHHHhCCCCCCccEEEeCCCcc--hHHHHHHHcCCceEEE
Q 012652 90 PGKLEELIEEINGRDDEKIDCFISDGFMG--WSMEVAEKMKLRRAVI 134 (459)
Q Consensus 90 ~~~~~~l~~~l~~~~~~~pDlvi~D~~~~--~~~~~A~~~giP~i~~ 134 (459)
.+.+.++++.+++ .+..+|+++.... .+-.+|+..|++.+.+
T Consensus 209 ~~~l~~l~~~ik~---~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l 252 (284)
T 2prs_A 209 AQRLHEIRTQLVE---QKATCVFAEPQFRPAVVESVARGTSVRMGTL 252 (284)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEECTTSCSHHHHHHTTTSCCEEEEC
T ss_pred HHHHHHHHHHHHH---cCCCEEEEeCCCChHHHHHHHHHcCCeEEEe
Confidence 4556666666666 8999999998765 5778899999998764
No 457
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=24.71 E-value=1e+02 Score=26.45 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|.++++..+ |- --..++++|.++|++|+++...
T Consensus 13 k~vlVTGas-gg--iG~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 13 LVAVITGGA-SG--LGLATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEECCC-Ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 455555443 32 3568999999999999998754
No 458
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=24.64 E-value=92 Score=30.12 Aligned_cols=41 Identities=17% Similarity=0.354 Sum_probs=31.1
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhhccCCCCCCeEEEecC
Q 012652 15 GHVIPLLEFSQCLAKHGFRVTFVNSEYNHKRVMKSLEGKNYLGEQIRLVSIP 66 (459)
Q Consensus 15 gH~~p~~~La~~L~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~ 66 (459)
++=.-++.+|+.|.+.|.++. ++......+++. |+.+..+.
T Consensus 32 ~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~ 72 (534)
T 4ehi_A 32 SDKEGIVEFGKELENLGFEIL--STGGTFKLLKEN---------GIKVIEVS 72 (534)
T ss_dssp SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEECB
T ss_pred cccccHHHHHHHHHHCCCEEE--EccHHHHHHHHC---------CCceeehh
Confidence 344558899999999998875 566788888887 66666654
No 459
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=24.59 E-value=4.1e+02 Score=24.43 Aligned_cols=95 Identities=8% Similarity=-0.017 Sum_probs=52.0
Q ss_pred HHHHHHHHhCC-CEEEEEeCCcc-------hHHHHhhhhccCCCCCCeEEEecCCCCCCCCCCCChHHHHHHHHHhccHH
Q 012652 21 LEFSQCLAKHG-FRVTFVNSEYN-------HKRVMKSLEGKNYLGEQIRLVSIPDGMEPWEERTDPGKLIEKVLQVMPGK 92 (459)
Q Consensus 21 ~~La~~L~~rG-h~Vt~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (459)
-.|++.|.+.| .+|.+++.+.. .+.+.+.... .++.+..++..-+.. ....
T Consensus 22 ~~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~-----~g~~~~~~~~~~~~p----------------~~~~ 80 (387)
T 3bfj_A 22 SVVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLRE-----AGIEVAIFDGVEPNP----------------KDTN 80 (387)
T ss_dssp GGHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHH-----TTCEEEEECCCCSSC----------------BHHH
T ss_pred HHHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHH-----cCCeEEEECCccCCC----------------CHHH
Confidence 35667777777 88988886543 3333332211 256665554321110 1233
Q ss_pred HHHHHHHHhCCCCCCccEEEeCCCcc---hHHHHHHH------------------cCCceEEEeCcch
Q 012652 93 LEELIEEINGRDDEKIDCFISDGFMG---WSMEVAEK------------------MKLRRAVIWTSCA 139 (459)
Q Consensus 93 ~~~l~~~l~~~~~~~pDlvi~D~~~~---~~~~~A~~------------------~giP~i~~~~~~~ 139 (459)
+.++.+.+++ .++|+||+=..-. .+-.+|.. .++|++.+-++..
T Consensus 81 v~~~~~~~~~---~~~d~IIavGGGsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~g 145 (387)
T 3bfj_A 81 VRDGLAVFRR---EQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAG 145 (387)
T ss_dssp HHHHHHHHHH---TTCCEEEEEESHHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTT
T ss_pred HHHHHHHHHh---cCCCEEEEeCCcchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCC
Confidence 4455555555 7899998543322 34444443 4899998766653
No 460
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=24.52 E-value=2.4e+02 Score=25.29 Aligned_cols=87 Identities=20% Similarity=0.218 Sum_probs=45.9
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhC-CCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccchhhhhcCCCccce
Q 012652 276 VIYVAFGSHTVLDHNQFQELALGLEIC-NRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAPQQRVLSHPSIACF 354 (459)
Q Consensus 276 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vpq~~iL~~~~~~~~ 354 (459)
+..+..|.++ ...+.++... +..++.++... ++... ...+..-+.-+-...+++..+++.++
T Consensus 7 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~---------~~~~~-~~a~~~g~~~~~~~~~~l~~~~~D~V 69 (344)
T 3euw_A 7 IALFGAGRIG-------HVHAANIAANPDLELVVIADPF---------IEGAQ-RLAEANGAEAVASPDEVFARDDIDGI 69 (344)
T ss_dssp EEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSS---------HHHHH-HHHHTTTCEEESSHHHHTTCSCCCEE
T ss_pred EEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCC---------HHHHH-HHHHHcCCceeCCHHHHhcCCCCCEE
Confidence 6777777653 2345555554 44555555433 11111 11111012234456778885555556
Q ss_pred eeccCch----hHHHhhhcCCceec-cccc
Q 012652 355 LSHCGWN----STMEGVSNGIPFLC-WPYF 379 (459)
Q Consensus 355 I~HgG~~----s~~eal~~gvP~v~-~P~~ 379 (459)
+----.. -+.+|+.+|+++++ -|+.
T Consensus 70 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~ 99 (344)
T 3euw_A 70 VIGSPTSTHVDLITRAVERGIPALCEKPID 99 (344)
T ss_dssp EECSCGGGHHHHHHHHHHTTCCEEECSCSC
T ss_pred EEeCCchhhHHHHHHHHHcCCcEEEECCCC
Confidence 6544433 36688999999876 3543
No 461
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=24.46 E-value=80 Score=28.49 Aligned_cols=36 Identities=25% Similarity=0.216 Sum_probs=24.4
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+ +.|+++++..+.| --..+|++|.++|++|....-
T Consensus 1 M~m~~k~vlVTGas~G---IG~aia~~L~~~G~~V~~~~r 37 (324)
T 3u9l_A 1 MVMSKKIILITGASSG---FGRLTAEALAGAGHRVYASMR 37 (324)
T ss_dssp ----CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEecC
Confidence 54 3466777755543 346899999999999987654
No 462
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=24.42 E-value=67 Score=24.65 Aligned_cols=47 Identities=13% Similarity=0.032 Sum_probs=34.6
Q ss_pred cCCceeccccccccchhhhhhhceeeeeeeeecCCCCcccHHHHHHHHHHHhC
Q 012652 369 NGIPFLCWPYFVDQFLNESYICDIWKVGLKLDKDESGIITGEEISNKLVQVLG 421 (459)
Q Consensus 369 ~gvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~l~~~i~~ll~ 421 (459)
..+|+|++--..+.. ...+..+ .|+--.+. +.++.++|.++|+++++
T Consensus 86 ~~ipvI~lTa~~~~~-~~~~~~~-~Ga~~yl~----KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKRE-QIIEAAQ-AGVNGYIV----KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHH-HHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHH-HHHHHHH-CCCCEEEE----CCCCHHHHHHHHHHHHh
Confidence 468988887665544 3444445 48887786 67899999999999874
No 463
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=24.37 E-value=83 Score=26.91 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=23.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|.++++.++ |- --..++++|.++|++|.++...
T Consensus 14 k~vlItGas-gg--iG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGA-QN--IGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ch--HHHHHHHHHHHCCCEEEEEeCC
Confidence 445555333 32 3467999999999999998764
No 464
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=24.33 E-value=82 Score=25.66 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=23.0
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|||+++.. +.|-+ -..++++|. +||+|+.+...
T Consensus 3 kM~vlVtG--asg~i--G~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 3 AMKILLIG--ASGTL--GSAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp SCEEEEET--TTSHH--HHHHHHHHT-TTSEEEEEESS
T ss_pred CcEEEEEc--CCcHH--HHHHHHHHH-CCCeEEEEecC
Confidence 56766554 33433 367899999 99999988653
No 465
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=24.31 E-value=26 Score=30.76 Aligned_cols=32 Identities=9% Similarity=0.245 Sum_probs=22.9
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|||++.. +.|.+ -..|+++|.++||+|+.++.
T Consensus 6 m~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITG--ANGQL--GKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp EEEEEES--TTSHH--HHHHHHHSCTTTEEEEEECT
T ss_pred eEEEEEC--CCCHH--HHHHHHHHHhCCCEEEEecc
Confidence 4676664 33433 34788999999999999875
No 466
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=24.29 E-value=1.2e+02 Score=26.04 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+-|+++++.++.| --.++|++|.++|++|.++...
T Consensus 6 ~~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 6 KSRVFIVTGASSG---LGAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467777755542 2468999999999999988754
No 467
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=24.25 E-value=37 Score=29.59 Aligned_cols=21 Identities=10% Similarity=-0.055 Sum_probs=17.4
Q ss_pred HHHHHHHHhCCCEEEEEeCCc
Q 012652 21 LEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 21 ~~La~~L~~rGh~Vt~~~~~~ 41 (459)
..|+++|.++||+|+++....
T Consensus 17 ~~la~~L~~~G~~V~~~~r~~ 37 (267)
T 3rft_A 17 RVMRERLAPMAEILRLADLSP 37 (267)
T ss_dssp HHHHHHTGGGEEEEEEEESSC
T ss_pred HHHHHHHHhcCCEEEEEecCC
Confidence 568999999999999887543
No 468
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=24.18 E-value=1.2e+02 Score=25.98 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=24.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
-|+++++.++.| --.++|++|+++|++|.++..
T Consensus 8 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 8 NRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 466777755543 346899999999999998854
No 469
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=24.18 E-value=52 Score=27.61 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=23.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.+||+|+..+..| ..+|+.|.+.||+|+++...
T Consensus 28 ~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFA-----RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3678888644333 45788899999999987653
No 470
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=24.16 E-value=72 Score=24.52 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=23.7
Q ss_pred CEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLL-EFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~-~La~~L~~rGh~Vt~~~~ 39 (459)
|||+++-+...|+..-+. .|++.|.+.|++|.++..
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 467766555567765444 346666678999988754
No 471
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=24.09 E-value=76 Score=27.22 Aligned_cols=30 Identities=3% Similarity=-0.041 Sum_probs=21.3
Q ss_pred CCccEEEeCCCcc--hHHHHHHHcCCceEEEe
Q 012652 106 EKIDCFISDGFMG--WSMEVAEKMKLRRAVIW 135 (459)
Q Consensus 106 ~~pDlvi~D~~~~--~~~~~A~~~giP~i~~~ 135 (459)
.+||+||...... ....--+..|||++.+.
T Consensus 58 l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 58 MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 6999999886542 23333467899999874
No 472
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=24.06 E-value=93 Score=24.58 Aligned_cols=37 Identities=22% Similarity=0.206 Sum_probs=26.9
Q ss_pred CEEEEEcCCCccCHHHHHH-HHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLE-FSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~-La~~L~~rGh~Vt~~~~~ 40 (459)
|||+++-+...|+..-+.. |++.|.+.|++|.++...
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 4677666666788876654 688888899999888654
No 473
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=24.06 E-value=95 Score=26.68 Aligned_cols=33 Identities=12% Similarity=-0.005 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|.++++..+. - --..+|++|.++|++|.++...
T Consensus 10 k~vlVTGas~-g--iG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTGGSR-G--IGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp CEEEEESCSS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 5556664433 2 3467899999999999988754
No 474
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=24.04 E-value=1.1e+02 Score=26.07 Aligned_cols=33 Identities=9% Similarity=0.053 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++++..+ |-+ -..++++|.++|++|+++...
T Consensus 8 k~vlVTGas-~gi--G~~ia~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTGAG-KGI--GYATALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEESTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHH--HHHHHHHHHHCCCEEEEEeCc
Confidence 455555443 322 457899999999999988654
No 475
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=24.04 E-value=59 Score=30.22 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=26.1
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
..+|+|+..+-.| +.+|..|+++|++|+++-..
T Consensus 26 ~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 26 DKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp TCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEECS
T ss_pred CCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 4578888766544 67888999999999999753
No 476
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=24.03 E-value=56 Score=28.45 Aligned_cols=41 Identities=17% Similarity=0.153 Sum_probs=31.7
Q ss_pred CCCEEEEEcCC---CccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012652 2 SSPHILVFSTP---AQGHVIPLLEFSQCLAKHGFRVTFVNSEYN 42 (459)
Q Consensus 2 ~~~~il~~~~~---~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~ 42 (459)
++||.+|++.+ +-|-=.-..+|+..|+.||++||.+=.+++
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPY 64 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECB
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCc
Confidence 36789999865 335566778999999999999998765443
No 477
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=24.03 E-value=95 Score=26.82 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=25.6
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
-|+++++.++.| --.++|++|+++|++|.++...
T Consensus 8 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 8 EAVAVVTGGSSG---IGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777765543 3578899999999999888654
No 478
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=24.01 E-value=96 Score=26.66 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
.|+++++..+. - --..++++|.++|++|+++...
T Consensus 7 ~k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 7 GKLAVVTAGSS-G--LGFASALELARNGARLLLFSRN 40 (260)
T ss_dssp TCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCc-h--HHHHHHHHHHHCCCEEEEEeCC
Confidence 35566664443 2 3468999999999999988754
No 479
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=23.95 E-value=1e+02 Score=22.39 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=24.6
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|++.||+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 35 (127)
T 3i42_A 1 MSLQQALIVE----DYQAAAETFKELLEMLGFQADYVMS 35 (127)
T ss_dssp -CCEEEEEEC----SCHHHHHHHHHHHHHTTEEEEEESS
T ss_pred CCcceEEEEc----CCHHHHHHHHHHHHHcCCCEEEECC
Confidence 7777888875 4555666778888888998876543
No 480
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=23.88 E-value=60 Score=28.59 Aligned_cols=38 Identities=24% Similarity=0.359 Sum_probs=24.8
Q ss_pred CC-CCEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeCCcc
Q 012652 1 MS-SPHILVFSTPAQGHVIPLLEFSQCLAKHG-FRVTFVNSEYN 42 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~p~~~La~~L~~rG-h~Vt~~~~~~~ 42 (459)
|+ +++|++.. +.|.+ -..++++|.++| |+|+.++....
T Consensus 2 M~~~~~ilVtG--atG~i--G~~l~~~L~~~g~~~V~~~~R~~~ 41 (299)
T 2wm3_A 2 MVDKKLVVVFG--GTGAQ--GGSVARTLLEDGTFKVRVVTRNPR 41 (299)
T ss_dssp --CCCEEEEET--TTSHH--HHHHHHHHHHHCSSEEEEEESCTT
T ss_pred CCCCCEEEEEC--CCchH--HHHHHHHHHhcCCceEEEEEcCCC
Confidence 54 45666553 44544 456889999988 99999986543
No 481
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=23.86 E-value=66 Score=29.43 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEYN 42 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~~ 42 (459)
+++|++.. +.|.+- ..|+++|.++||+|+.++-...
T Consensus 5 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~~ 40 (352)
T 1xgk_A 5 KKTIAVVG--ATGRQG--ASLIRVAAAVGHHVRAQVHSLK 40 (352)
T ss_dssp CCCEEEES--TTSHHH--HHHHHHHHHTTCCEEEEESCSC
T ss_pred CCEEEEEC--CCCHHH--HHHHHHHHhCCCEEEEEECCCC
Confidence 45666654 444442 4678999999999999886443
No 482
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=23.85 E-value=1.6e+02 Score=28.51 Aligned_cols=75 Identities=8% Similarity=-0.074 Sum_probs=42.6
Q ss_pred HHHHHHHHhhCCCCEEEEEcCCCCCCCCCCCChhHHHHhcCCceeecccc-hh---------hhhcCCCccceeeccCc-
Q 012652 292 FQELALGLEICNRPFLWVVRPDITTDANDVYPRGFQERVATRGQMIGWAP-QQ---------RVLSHPSIACFLSHCGW- 360 (459)
Q Consensus 292 ~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~i~~~vp-q~---------~iL~~~~~~~~I~HgG~- 360 (459)
.+.+++.|++.|.+.++.+.+... ..+.+.+.+.++.+.-.. |. .+-..+.+ +++|.|.
T Consensus 5 a~~l~~~L~~~GV~~vfg~PG~~~--------~~l~~al~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~~v--~~~tsGpG 74 (528)
T 1q6z_A 5 HGTTYELLRRQGIDTVFGNPGSNA--------LPFLKDFPEDFRYILALQEACVVGIADGYAQASRKPAF--INLHSAAG 74 (528)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGG--------HHHHTTCCTTCEEEECSSHHHHHHHHHHHHHHHTSCEE--EEEEHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCcch--------HHHHHHHhhcCcEEEECcHHHHHHHHHHHHHHhCCCEE--EEEcCChH
Confidence 355777777778887777655411 112222222333332221 11 12234334 7788874
Q ss_pred -----hhHHHhhhcCCceecc
Q 012652 361 -----NSTMEGVSNGIPFLCW 376 (459)
Q Consensus 361 -----~s~~eal~~gvP~v~~ 376 (459)
+.+.||-+.++|+|++
T Consensus 75 ~~N~~~~l~~A~~~~~Pll~i 95 (528)
T 1q6z_A 75 TGNAMGALSNAWNSHSPLIVT 95 (528)
T ss_dssp HHHTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHhhcCCCEEEE
Confidence 4688999999999999
No 483
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=23.84 E-value=59 Score=28.69 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+||.|+..+..| ..+|+.|.++||+|+++...
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECSS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 478888776666 35788999999999998654
No 484
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=23.82 E-value=1.5e+02 Score=29.28 Aligned_cols=27 Identities=7% Similarity=0.235 Sum_probs=22.2
Q ss_pred ccceeeccCch------hHHHhhhcCCceeccc
Q 012652 351 IACFLSHCGWN------STMEGVSNGIPFLCWP 377 (459)
Q Consensus 351 ~~~~I~HgG~~------s~~eal~~gvP~v~~P 377 (459)
..++++|.|.| .+.||-+.++|+|++.
T Consensus 76 p~v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 76 PGICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp CEEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 34489999954 7789999999999985
No 485
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=23.77 E-value=98 Score=26.63 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+++++..+. - --..+|++|.++|++|.++...
T Consensus 8 k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 8 KVAVITGSSS-G--IGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CEEEEESCSS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc-h--HHHHHHHHHHHCCCEEEEEcCC
Confidence 5566664443 2 3468999999999999988754
No 486
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.71 E-value=75 Score=28.97 Aligned_cols=31 Identities=10% Similarity=-0.048 Sum_probs=21.1
Q ss_pred CCccEEEeCCCcc-hHHHHHHHcCCceEEEeC
Q 012652 106 EKIDCFISDGFMG-WSMEVAEKMKLRRAVIWT 136 (459)
Q Consensus 106 ~~pDlvi~D~~~~-~~~~~A~~~giP~i~~~~ 136 (459)
.+||+||...... ....+.+.+|||++.+..
T Consensus 95 l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 95 LQPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp HCCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 3899999865422 233445778999998743
No 487
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=23.67 E-value=76 Score=28.31 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=23.1
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
++|++.. +.|.+ -..|+++|.++||+|+.+...
T Consensus 2 ~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICG--GAGYI--GSHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEC--CCcHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 4666654 33333 367899999999999998753
No 488
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=23.63 E-value=43 Score=26.85 Aligned_cols=37 Identities=14% Similarity=0.027 Sum_probs=20.8
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|++|||.+-+-.+. +.-=-.|.+.|.++||+|+=+++
T Consensus 1 m~~MkIaigsDhaG--~~lK~~i~~~L~~~G~eV~D~G~ 37 (162)
T 2vvp_A 1 MSGMRVYLGADHAG--YELKQRIIEHLKQTGHEPIDCGA 37 (162)
T ss_dssp --CCEEEEEECHHH--HHHHHHHHHHHHHTTCEEEECSC
T ss_pred CCCCEEEEEeCchh--HHHHHHHHHHHHHCCCEEEEeCC
Confidence 56677766552211 11122367788888998887765
No 489
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=23.60 E-value=1.1e+02 Score=26.97 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=24.3
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
+++|++... .|-+ -..|+++|.++||+|+.++..
T Consensus 2 ~~~vlVtGa--tG~i--G~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGG--TGFL--GQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC--CcHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 357776643 3333 346789999999999999875
No 490
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=23.50 E-value=72 Score=27.38 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=22.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|.++++.. .|-+ -..++++|.++|++|+++..
T Consensus 15 k~vlITGa-sggi--G~~~a~~l~~~G~~V~~~~r 46 (265)
T 1h5q_A 15 KTIIVTGG-NRGI--GLAFTRAVAAAGANVAVIYR 46 (265)
T ss_dssp EEEEEETT-TSHH--HHHHHHHHHHTTEEEEEEES
T ss_pred CEEEEECC-CchH--HHHHHHHHHHCCCeEEEEeC
Confidence 45555533 3333 46889999999999999875
No 491
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=23.47 E-value=80 Score=28.31 Aligned_cols=39 Identities=8% Similarity=0.209 Sum_probs=28.1
Q ss_pred CC-CCEEEEEcCCCccCHH-HHHHHHHHHHhCCCEEEEEeC
Q 012652 1 MS-SPHILVFSTPAQGHVI-PLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 1 m~-~~~il~~~~~~~gH~~-p~~~La~~L~~rGh~Vt~~~~ 39 (459)
|+ +.||+++.-+..++.. ....+.+.|.++|++|.+...
T Consensus 1 m~~m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 1 MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp ----CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 66 3589999988777654 467888999999999887644
No 492
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=23.45 E-value=1e+02 Score=26.78 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=25.0
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
-|+++++.++.| --.++|++|+++|++|.+...
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777755543 356889999999999998765
No 493
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=23.35 E-value=27 Score=32.01 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCC-------CEEEEEeCCc
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHG-------FRVTFVNSEY 41 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rG-------h~Vt~~~~~~ 41 (459)
|.++||.|+..+..|. .+|..|+++| |+|+++....
T Consensus 6 m~~mkI~iIG~G~mG~-----~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGS-----AIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp -CCEEEEEECCSHHHH-----HHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred cCCCeEEEECCCHHHH-----HHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 5567899988766554 5678888888 9999997644
No 494
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=23.32 E-value=74 Score=27.49 Aligned_cols=37 Identities=11% Similarity=0.226 Sum_probs=29.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
.|.|..-++-|=..-...||..|+++|++|.++-.+.
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 39 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 3446555667899999999999999999999986654
No 495
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=23.27 E-value=1e+02 Score=26.47 Aligned_cols=33 Identities=6% Similarity=-0.003 Sum_probs=23.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 5 HILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 5 ~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|.++++.++. - --..++++|.++||+|+++...
T Consensus 15 k~vlITGasg-g--iG~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 15 KTVLVTGGTK-G--IGHAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp CEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 4555654433 2 3467899999999999998754
No 496
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=23.26 E-value=97 Score=27.21 Aligned_cols=37 Identities=16% Similarity=0.115 Sum_probs=24.6
Q ss_pred CCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 3 SPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
+.+||++...-.=-...+-.+...++++|++|++++-
T Consensus 7 ~~rvLvv~aHPDDe~lg~GGtia~~~~~G~~V~vv~~ 43 (273)
T 3dff_A 7 ATRLLAISPHLDDAVLSFGAGLAQAAQDGANVLVYTV 43 (273)
T ss_dssp -CEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCCEEEEEeCCChHHHhHHHHHHHHHHCCCcEEEEEE
Confidence 4678866644443345555666677789999999973
No 497
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=23.18 E-value=1.2e+02 Score=27.92 Aligned_cols=33 Identities=15% Similarity=0.037 Sum_probs=25.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSEY 41 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~~ 41 (459)
.||+++..+ .....++++|++.||+|.++.+..
T Consensus 2 ~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 478888753 345778899999999999988753
No 498
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=23.10 E-value=99 Score=22.86 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEe
Q 012652 3 SPHILVFSTPAQGHVIP-LLEFSQCLAKHGFRVTFVN 38 (459)
Q Consensus 3 ~~~il~~~~~~~gH~~p-~~~La~~L~~rGh~Vt~~~ 38 (459)
+.||+++|..+.|.-.- .-.|-+.+.+.|.++.+-.
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 45899999999998774 6777788888998865544
No 499
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=23.05 E-value=76 Score=28.59 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=22.7
Q ss_pred CEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 012652 4 PHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNS 39 (459)
Q Consensus 4 ~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~ 39 (459)
++|++.. +.|.+ -..|+++|.++||+|+.+..
T Consensus 3 ~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 3 EKVLVTG--GAGYI--GSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp SEEEEET--TTSHH--HHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEec
Confidence 4666654 33433 35788999999999999864
No 500
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=23.04 E-value=72 Score=30.47 Aligned_cols=35 Identities=23% Similarity=0.380 Sum_probs=25.0
Q ss_pred CCCCEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCC
Q 012652 1 MSSPHILVFSTPAQGHVIPLLEFSQCLAKHGFRVTFVNSE 40 (459)
Q Consensus 1 m~~~~il~~~~~~~gH~~p~~~La~~L~~rGh~Vt~~~~~ 40 (459)
|+..+|+++. .|.+- ..+++.|.++|++|+++...
T Consensus 1 M~~k~VlViG---aG~iG--~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 1 MATKSVLMLG---SGFVT--RPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp -CCCEEEEEC---CSTTH--HHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEC---CCHHH--HHHHHHHHhCcCEEEEEECC
Confidence 7777888884 34443 35788899999999888754
Done!