Query 012658
Match_columns 459
No_of_seqs 223 out of 1973
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 13:44:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012658.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012658hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 2.5E-92 8.6E-97 737.8 42.4 393 64-458 5-401 (490)
2 3ifg_A Succinate-semialdehyde 100.0 4.1E-88 1.4E-92 706.6 44.6 390 65-458 12-402 (484)
3 2o2p_A Formyltetrahydrofolate 100.0 8.8E-88 3E-92 708.4 46.5 390 67-457 38-432 (517)
4 3rh9_A Succinate-semialdehyde 100.0 1.2E-87 4.2E-92 705.6 46.2 392 63-458 9-402 (506)
5 3ed6_A Betaine aldehyde dehydr 100.0 1.6E-87 5.4E-92 706.9 45.5 390 65-458 32-428 (520)
6 1bxs_A Aldehyde dehydrogenase; 100.0 3.2E-87 1.1E-91 702.1 46.1 394 65-458 20-414 (501)
7 3b4w_A Aldehyde dehydrogenase; 100.0 3.4E-87 1.2E-91 701.5 45.1 393 64-458 7-401 (495)
8 4f3x_A Putative aldehyde dehyd 100.0 3.4E-87 1.2E-91 701.5 43.1 391 63-458 23-415 (498)
9 3ek1_A Aldehyde dehydrogenase; 100.0 3.4E-87 1.2E-91 701.9 43.0 388 65-458 32-420 (504)
10 3u4j_A NAD-dependent aldehyde 100.0 8.5E-87 2.9E-91 702.5 46.1 390 65-458 22-416 (528)
11 1o04_A Aldehyde dehydrogenase, 100.0 5E-87 1.7E-91 700.5 42.7 392 67-458 21-413 (500)
12 3iwj_A Putative aminoaldehyde 100.0 1.8E-86 6.1E-91 697.7 46.3 394 63-458 5-407 (503)
13 3i44_A Aldehyde dehydrogenase; 100.0 1.2E-86 4.1E-91 697.1 43.4 394 60-458 20-417 (497)
14 3k2w_A Betaine-aldehyde dehydr 100.0 1.1E-86 3.8E-91 698.4 42.3 394 61-458 8-406 (497)
15 1a4s_A ALDH, betaine aldehyde 100.0 3.4E-86 1.2E-90 695.2 44.8 390 64-458 18-414 (503)
16 3r31_A BADH, betaine aldehyde 100.0 2E-86 6.7E-91 698.1 42.0 388 63-458 12-406 (517)
17 3qan_A 1-pyrroline-5-carboxyla 100.0 1.1E-85 3.8E-90 695.5 45.4 387 65-458 37-431 (538)
18 2imp_A Lactaldehyde dehydrogen 100.0 1.4E-85 4.8E-90 687.9 44.3 389 66-458 7-397 (479)
19 3jz4_A Succinate-semialdehyde 100.0 1.6E-85 5.4E-90 687.8 44.7 390 65-458 9-399 (481)
20 4e4g_A Methylmalonate-semialde 100.0 4.5E-86 1.5E-90 696.0 40.6 392 62-458 23-420 (521)
21 2d4e_A 5-carboxymethyl-2-hydro 100.0 9.5E-86 3.3E-90 693.6 43.0 387 67-458 28-423 (515)
22 2ve5_A BADH, betaine aldehyde 100.0 1.2E-85 4.2E-90 690.5 42.7 395 61-458 2-401 (490)
23 1wnd_A Putative betaine aldehy 100.0 1.1E-85 3.8E-90 689.5 42.2 388 65-458 23-413 (495)
24 3prl_A NADP-dependent glyceral 100.0 2.1E-85 7.2E-90 689.0 42.9 384 65-458 11-400 (505)
25 2w8n_A Succinate-semialdehyde 100.0 1.2E-84 4E-89 681.4 42.7 385 67-458 14-404 (487)
26 4dng_A Uncharacterized aldehyd 100.0 2E-84 6.9E-89 680.5 42.6 388 64-458 5-395 (485)
27 2j6l_A Aldehyde dehydrogenase 100.0 2.8E-84 9.7E-89 680.6 43.7 387 65-458 23-414 (500)
28 3r64_A NAD dependent benzaldeh 100.0 3.4E-84 1.2E-88 681.2 43.5 391 61-458 8-402 (508)
29 3pqa_A Lactaldehyde dehydrogen 100.0 3.6E-84 1.2E-88 676.6 42.0 376 68-457 2-381 (486)
30 1uzb_A 1-pyrroline-5-carboxyla 100.0 5.5E-84 1.9E-88 680.8 42.5 386 66-458 38-431 (516)
31 3ros_A NAD-dependent aldehyde 100.0 7.2E-84 2.5E-88 674.1 42.4 372 82-458 5-376 (484)
32 1t90_A MMSDH, probable methylm 100.0 6.5E-84 2.2E-88 676.0 41.4 388 65-458 5-395 (486)
33 3ty7_A Putative aldehyde dehyd 100.0 3.5E-84 1.2E-88 677.5 37.7 388 64-458 6-396 (478)
34 1euh_A NADP dependent non phos 100.0 9.8E-84 3.4E-88 673.3 41.0 382 65-458 4-391 (475)
35 3ju8_A Succinylglutamic semial 100.0 5.9E-83 2E-87 669.4 45.4 385 67-458 7-394 (490)
36 1uxt_A Glyceraldehyde-3-phosph 100.0 1.1E-83 3.9E-88 675.7 38.7 383 65-458 18-409 (501)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 9.1E-83 3.1E-87 674.9 43.2 388 64-457 62-460 (563)
38 3etf_A Putative succinate-semi 100.0 6.4E-81 2.2E-85 650.5 42.1 375 79-458 5-379 (462)
39 4f9i_A Proline dehydrogenase/d 100.0 2.4E-80 8.2E-85 690.2 42.7 388 65-458 531-925 (1026)
40 4h7n_A Aldehyde dehydrogenase; 100.0 7.3E-80 2.5E-84 643.8 37.7 373 78-458 3-378 (474)
41 2y53_A Aldehyde dehydrogenase 100.0 1E-79 3.5E-84 651.3 38.3 384 66-458 8-420 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 8.7E-76 3E-80 610.5 41.2 363 81-458 6-372 (457)
43 3v4c_A Aldehyde dehydrogenase 100.0 8.7E-76 3E-80 620.4 35.2 375 63-458 27-426 (528)
44 3sza_A Aldehyde dehydrogenase, 100.0 4.4E-74 1.5E-78 598.4 41.3 347 99-458 14-364 (469)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 1.1E-74 3.8E-79 609.5 35.5 364 77-458 3-391 (510)
46 3haz_A Proline dehydrogenase; 100.0 8.2E-72 2.8E-76 620.4 39.2 352 97-457 544-899 (1001)
47 3my7_A Alcohol dehydrogenase/a 100.0 8.8E-65 3E-69 527.0 24.4 335 97-458 1-350 (452)
48 3k9d_A LMO1179 protein, aldehy 100.0 8.1E-65 2.8E-69 528.9 22.1 338 96-458 5-355 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 2.5E-64 8.4E-69 523.9 20.1 322 84-458 10-349 (463)
50 1vlu_A Gamma-glutamyl phosphat 100.0 6.3E-63 2.2E-67 513.9 15.2 314 104-458 15-354 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 1.6E-59 5.4E-64 486.3 24.8 307 102-458 25-353 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 1.5E-59 5E-64 484.2 21.3 305 102-458 13-336 (427)
53 4gic_A HDH, histidinol dehydro 90.3 16 0.00053 36.4 24.2 166 192-373 118-293 (423)
54 1kae_A HDH, histidinol dehydro 73.9 75 0.0026 31.7 20.5 189 166-373 87-287 (434)
55 3v4g_A Arginine repressor; vib 67.2 8.2 0.00028 33.9 5.5 38 229-269 115-152 (180)
56 2xw6_A MGS, methylglyoxal synt 52.1 7.7 0.00026 32.4 2.5 78 223-311 23-109 (134)
57 3lap_A Arginine repressor; arg 51.6 72 0.0025 27.5 8.8 37 229-269 110-146 (170)
58 3v42_A Folliculin; tumor suppr 50.9 11 0.00037 34.4 3.5 69 221-297 21-89 (226)
59 1b93_A Protein (methylglyoxal 48.8 41 0.0014 28.5 6.6 114 205-344 12-135 (152)
60 2yvq_A Carbamoyl-phosphate syn 44.8 40 0.0014 28.1 6.0 62 250-313 60-131 (143)
61 1b4b_A Arginine repressor; cor 41.3 42 0.0015 24.3 4.9 56 230-302 12-67 (71)
62 2zfz_A Arginine repressor; DNA 40.6 47 0.0016 24.7 5.1 36 230-269 20-55 (79)
63 1xxa_A ARGR, arginine represso 36.8 35 0.0012 25.3 3.8 37 230-269 14-50 (78)
64 2p5m_A Arginine repressor; alp 35.6 41 0.0014 25.2 4.2 36 230-269 24-59 (83)
65 3fxd_A Protein ICMQ; helix bun 33.2 1E+02 0.0035 21.3 5.3 47 100-152 5-51 (57)
66 1vmd_A MGS, methylglyoxal synt 32.9 49 0.0017 28.8 4.7 114 205-344 28-151 (178)
67 2ioj_A Hypothetical protein AF 32.6 37 0.0013 27.9 3.8 44 261-304 53-96 (139)
68 3pzy_A MOG; ssgcid, seattle st 29.2 37 0.0013 29.0 3.3 52 244-296 27-80 (164)
69 2l82_A Designed protein OR32; 28.8 2.1E+02 0.0073 22.5 10.8 104 285-414 5-108 (162)
70 1b4a_A Arginine repressor; hel 26.8 79 0.0027 26.6 4.9 56 230-302 90-145 (149)
71 1y5e_A Molybdenum cofactor bio 26.2 28 0.00094 29.9 1.9 53 243-295 30-85 (169)
72 3iwt_A 178AA long hypothetical 25.2 92 0.0031 26.6 5.2 53 243-295 39-94 (178)
73 2v9v_A Selenocysteine-specific 24.2 78 0.0027 25.4 4.3 80 334-416 36-124 (135)
74 3rfq_A Pterin-4-alpha-carbinol 23.6 40 0.0014 29.6 2.4 54 243-296 48-103 (185)
75 1g62_A Ribosome anti-associati 22.8 3.3E+02 0.011 24.4 8.4 145 224-401 58-221 (224)
76 3fgh_A Transcription factor A, 20.1 82 0.0028 22.0 3.2 36 111-148 29-64 (67)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.5e-92 Score=737.82 Aligned_cols=393 Identities=40% Similarity=0.677 Sum_probs=377.0
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
...++||||+|+++.++++++++||+||++|++++.++.+|+++|+++|++||. .|++++..+|.++|++++++|++|
T Consensus 5 ~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 82 (490)
T 2wme_A 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRER 82 (490)
T ss_dssp CCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 345899999999988999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+.+.+++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 83 NDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999987667999999999999999998887777666778899999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|..||+||+|.||||+.+|+.|++.++
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999987666
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
.+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|++++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~ 322 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence 55899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++||++++||.... .+|+|++||||.+++++|++++||+||||++|++|+|+
T Consensus 323 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (490)
T 2wme_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE 401 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCH
Confidence 9999999999999999999999999999999997643 36899999999999999999999999999999999985
No 2
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=4.1e-88 Score=706.62 Aligned_cols=390 Identities=37% Similarity=0.581 Sum_probs=373.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++. .|+..+++.++||+.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 9999999999999999976 5999999999999999888766655533 4567889999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|.+||+||+|.||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASE 402 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCH
Confidence 999999999999999999999999999999999865557999999999999999999999999999999999985
No 3
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=8.8e-88 Score=708.37 Aligned_cols=390 Identities=41% Similarity=0.753 Sum_probs=370.9
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||.||+++++++.++.+|+++|++.|++||++|.|+.++..+|.++|++++++|+++.++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 68999999987667899999999999999999999999999999999999866799999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC----CCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
|++++++|+|||+.++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 999999999999999864699999999999999998876655443 2233678999999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|..|++|++|.||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998788899999999999999999999999999999
Q ss_pred H-hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 303 A-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 303 a-~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
+ + ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 278 a~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 278 ALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred HHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8 6 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+++++||+++..+++++.++|++++++||++++||.....+|+|++||||.+++++|++++||+||||++|++|+|
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 9999999999999999999999999999999999976444699999999999999999999999999999999998
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=1.2e-87 Score=705.59 Aligned_cols=392 Identities=33% Similarity=0.515 Sum_probs=375.3
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
+...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3455899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEE-ccceEEEEEcCCCchHHhhH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~ 221 (459)
|.++|++++++|+|||+.++. .|+..+++.++|++++++++.+...+...+...++.+ +|+|||++|+|||||+.+.+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999987 6999999999999999998877766654566788889 99999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|++||+||+|.||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 302 ~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 887 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC-CCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++||+++..+++++.++|++++++||++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTE 402 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCH
Confidence 9999999999999999999999999999999999976433 7999999999999999999999999999999999985
No 5
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1.6e-87 Score=706.95 Aligned_cols=390 Identities=36% Similarity=0.608 Sum_probs=373.2
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhc--cCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~--~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++|| . .|+.++..+|.++|+++++.|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 4578999999988788999999999999999999999999999999999999 8 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
+.++|++++++|+|||+.++. .|+..+++.++||+++++++.+...+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 999999999999999999987 5999999999999999988776655543 46678899999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.++.|.+||+||+|.||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 302 ~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+++++||++++.+++++.++|++++++||++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999997642 4699999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 428 ~ 428 (520)
T 3ed6_A 428 E 428 (520)
T ss_dssp H
T ss_pred H
Confidence 5
No 6
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=3.2e-87 Score=702.12 Aligned_cols=394 Identities=54% Similarity=0.916 Sum_probs=373.1
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g-~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||++| .|+.++..+|.++|+++++.|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 3468999999987678899999999999999999999999999999999999853 699999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...+..++|+|||++|+|||||+...+++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 99999999999999998876679999999999999999887766555444556789999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.+.+..|.+||+||+|.||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
..++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 260 ~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred hccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 23899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 999999999999999999999999999999999765446999999999999999999999999999999999985
No 7
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.4e-87 Score=701.48 Aligned_cols=393 Identities=35% Similarity=0.564 Sum_probs=372.6
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
.+.++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||++|.|+.++..+|.++|+++++.|++|
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44578999999987678899999999999999999999999999999999999866799999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+.+.+...+..++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999986469999999999999999887766544333456789999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.+..|++|++||+|.||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8889999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 246 ~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 E-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp H-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred h-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTE 401 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCH
Confidence 9999999999999999999999999999999997643 36999999999999999999999999999999999985
No 8
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=3.4e-87 Score=701.49 Aligned_cols=391 Identities=34% Similarity=0.557 Sum_probs=372.8
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
+...++||||+|+.+.++ +++++||.||+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|+++++.|++
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 99 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEK 99 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 345589999999987666 999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
|.++|++++++|+|||+.++...|+..+++.++||+++++++.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 100 ~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 100 EADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHH
Confidence 9999999999999999999845799999999999999998876655442 245678899999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.+.++.|+.||+||+|.||||+.+|+.|++.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 258 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA 258 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999888899999999999999999999999999999
Q ss_pred HHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC
Q 012658 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (459)
Q Consensus 302 ~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~ 381 (459)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 259 aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d 337 (498)
T 4f3x_A 259 AAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDD 337 (498)
T ss_dssp HHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSG
T ss_pred HHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCC-eEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++||+++..+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 415 (498)
T 4f3x_A 338 TENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGK 415 (498)
T ss_dssp GGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTT
T ss_pred ccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCH
Confidence 99999999999999999999999999999 999999865567999999999999999999999999999999999986
No 9
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=3.4e-87 Score=701.94 Aligned_cols=388 Identities=36% Similarity=0.607 Sum_probs=371.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999764 999999999999999988766655433 3567889999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.++.|.+||+||+|.||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++|+++++||.. .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 420 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTE 420 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCH
Confidence 99999999999999999999999999999999975 35899999999999999999999999999999999985
No 10
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.5e-87 Score=702.54 Aligned_cols=390 Identities=40% Similarity=0.676 Sum_probs=374.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhc--cCCCCCCCCHHHHHHHHHHHHHHHH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLE 141 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~--~~g~W~~~~~~~R~~iL~~~a~~l~ 141 (459)
..++||||+|+.+.++++++++||.| |+++++++.++.+|++++++.|++|| . .|+.++..+|.++|+++++.|+
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADLIL 99 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHHHH
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHH
Confidence 45799999999887889999999999 99999999999999999999999999 7 8999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhh
Q 012658 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (459)
Q Consensus 142 ~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (459)
++.++|++++++|+|||+.++ ..|+..+++.++|++++++++.+...+.. .+...++.++|+|||++|+|||||+...
T Consensus 100 ~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 178 (528)
T 3u4j_A 100 ARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHH
Confidence 999999999999999999998 57999999999999999988876665544 4667899999999999999999999999
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|+.||+||+|.||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 258 (528)
T 3u4j_A 179 SERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGE 258 (528)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCC
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~ 380 (459)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 259 ~aa~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~ 337 (528)
T 3u4j_A 259 IAAR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPL 337 (528)
T ss_dssp HHHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTT
T ss_pred HHHh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCC
Confidence 9887 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCC-CCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++++||+++..+++++.++|++++++||++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 338 ~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 338 NERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 99999999999999999999999999999999999976543 7999999999999999999999999999999999985
No 11
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=5e-87 Score=700.51 Aligned_cols=392 Identities=57% Similarity=0.953 Sum_probs=371.4
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g-~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||++| .|+.++..+|.++|+++++.|++|.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999987678899999999999999999999999999999999999742 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
+|++++++|+|||+.++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+.+.+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999887667999999999999999888766554544455678999999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|..||+||+|.||||+.+|+.|++.++..
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999823
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++++
T Consensus 261 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 340 (500)
T 1o04_A 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTE 340 (500)
T ss_dssp TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+||+++..+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 341 ~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (500)
T 1o04_A 341 QGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413 (500)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence 9999999999999999999999999999999764346999999999999999999999999999999999985
No 12
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.8e-86 Score=697.74 Aligned_cols=394 Identities=39% Similarity=0.672 Sum_probs=372.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCC---CCCCCCHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADL 139 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g---~W~~~~~~~R~~iL~~~a~~ 139 (459)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++||.+| .|+.++..+|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344579999999988788999999999999999999999999999999999999843 79999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCccc---CC-CCCceEEEEEccceEEEEEcCCCc
Q 012658 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA---PA-DGPYHVQTLHEPIGVAGQIIPWNF 215 (459)
Q Consensus 140 l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~---~~-~~~~~~~~~~~P~GVv~~i~p~n~ 215 (459)
|++|.++|++++++|+|||+.++. .|+..+++.++||+.+++++.+... +. ..+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 999999999999999999999975 5999999999999999988765431 11 235678899999999999999999
Q ss_pred hHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHH
Q 012658 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (459)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g 295 (459)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|..|++||+|.||||+++|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhc
Q 012658 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (459)
Q Consensus 296 ~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~ 375 (459)
+.|++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEE
Q 012658 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTF 453 (459)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~ 453 (459)
+|+|+++++++||++++.+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 999999999999999999999999999999999999999997643 579999999999999999999999999999999
Q ss_pred ecCCC
Q 012658 454 NGENF 458 (459)
Q Consensus 454 ~~~~~ 458 (459)
+|+|+
T Consensus 403 ~~~~~ 407 (503)
T 3iwj_A 403 TFSTE 407 (503)
T ss_dssp EESSH
T ss_pred EeCCH
Confidence 99985
No 13
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.2e-86 Score=697.14 Aligned_cols=394 Identities=32% Similarity=0.537 Sum_probs=368.1
Q ss_pred CCCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHH
Q 012658 60 PVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADL 139 (459)
Q Consensus 60 ~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~ 139 (459)
..+....++||||+|+.+.++++++++||.||+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|+++++.
T Consensus 20 ~~m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 97 (497)
T 3i44_A 20 GSMLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEI 97 (497)
T ss_dssp --CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHH
T ss_pred cccccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHH
Confidence 3334567899999999987888999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEE-EccceEEEEEcCCCchHH
Q 012658 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 140 l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~ 218 (459)
|+++.++|++++++|+|||+.++...|+..+++.+++++...+.......+. .+...++. ++|+|||++|+|||||+.
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~ 176 (497)
T 3i44_A 98 YEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPMN 176 (497)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchHH
Confidence 9999999999999999999999875799999999999998776643322221 13445677 999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|++||+||+|.||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i 256 (497)
T 3i44_A 177 QVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDI 256 (497)
T ss_dssp HHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
++.+++ ++||+++|||||||+||++||| |.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 257 ~~~aa~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 334 (497)
T 3i44_A 257 SKNASN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGP 334 (497)
T ss_dssp HHHHHT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHhh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 999987 8999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCc-ccC--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
|+|+++++||++++.+++++.++|++++++||++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 335 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 414 (497)
T 3i44_A 335 GHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPF 414 (497)
T ss_dssp TTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEec
Confidence 999999999999999999999999999999999999994 322 26999999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 415 ~~~ 417 (497)
T 3i44_A 415 NTE 417 (497)
T ss_dssp SSH
T ss_pred CCH
Confidence 985
No 14
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.1e-86 Score=698.35 Aligned_cols=394 Identities=34% Similarity=0.550 Sum_probs=372.7
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHH
Q 012658 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (459)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l 140 (459)
.+....++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKI 85 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 445566899999999987889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHh
Q 012658 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (459)
Q Consensus 141 ~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (459)
+++.++|++++++|+|||+.++. .|+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+..
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHH
Confidence 99999999999999999999986 599999999999999988877655443 2466788999999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|+.||+||+|.||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 245 ~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99987 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcc--cCC--CCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
+++++++||+++..+++++.++|++++++||++++||.. ... +|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 222 6899999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 404 ~~~ 406 (497)
T 3k2w_A 404 SSM 406 (497)
T ss_dssp SCH
T ss_pred CCH
Confidence 985
No 15
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=3.4e-86 Score=695.17 Aligned_cols=390 Identities=34% Similarity=0.619 Sum_probs=369.5
Q ss_pred CccCceecCEeeeCCCCCe-eeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 64 DYTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
...++||||+|+.+.++++ ++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 95 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRE 95 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3457899999998767788 99999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
|.++|++++++|+|||+.++. .|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+...++
T Consensus 96 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 174 (503)
T 1a4s_A 96 RRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAW 174 (503)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHH
Confidence 999999999999999999875 5999999999999999988766544433344678999999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ +.+..|..||+||+|.||||+.+|+.|++.+
T Consensus 175 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~a 253 (503)
T 1a4s_A 175 KCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999977 8899999999999999999999999999999
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 254 a~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 332 (503)
T 1a4s_A 254 AK-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLT 332 (503)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hh-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc--C----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
++++||+++..+++++.++|++++++|+++++||... . .+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 333 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 412 (503)
T 1a4s_A 333 ETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFD 412 (503)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecC
Confidence 9999999999999999999999999999999999764 2 368999999999999999999999999999999999
Q ss_pred CC
Q 012658 457 NF 458 (459)
Q Consensus 457 ~~ 458 (459)
|+
T Consensus 413 ~~ 414 (503)
T 1a4s_A 413 TE 414 (503)
T ss_dssp CH
T ss_pred CH
Confidence 85
No 16
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2e-86 Score=698.12 Aligned_cols=388 Identities=35% Similarity=0.608 Sum_probs=369.9
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|++
T Consensus 12 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 89 (517)
T 3r31_A 12 QPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRE 89 (517)
T ss_dssp CCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999887889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhh----hcCcccCCCCCceEEEEEccceEEEEEcCCCchHH
Q 012658 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 143 ~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (459)
+.++|++++++|+|||+.++ |+..+++.++||+.++++ +.+...+...+. .++.++|+|||++|+|||||+.
T Consensus 90 ~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 90 RNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp THHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHH
Confidence 99999999999999999886 999999999999999988 766665544455 8999999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
..++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.+..|+.||+||+|.||||+.+|+.|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 244 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKV 244 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 78899999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 245 ~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 323 (517)
T 3r31_A 245 AAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGD 323 (517)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999987 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc---CCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL---GAKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~---~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
|+++++++||++++.+++++.++|++++++|+++++||... ..+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (517)
T 3r31_A 324 PLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDF 403 (517)
T ss_dssp TTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEE
T ss_pred CCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEe
Confidence 99999999999999999999999999999999999999312 136999999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 404 ~~~ 406 (517)
T 3r31_A 404 DDE 406 (517)
T ss_dssp CCH
T ss_pred CCH
Confidence 985
No 17
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.1e-85 Score=695.49 Aligned_cols=387 Identities=33% Similarity=0.542 Sum_probs=370.5
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
..++||||+|+. ++++++++||.| |+++++++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 788999999999 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHh-hhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
.++|++++++|+|||+.++.. |+..+++.++||+++ .+.+.+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999865 999999999999998 666677666655567889999999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|.+||+||+|.||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred HhcC------CCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc
Q 012658 303 AKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (459)
Q Consensus 303 a~~~------~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v 376 (459)
++ + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 5 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
|+|+++++++||+++..+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754479999999999999999999999999999999999
Q ss_pred CC
Q 012658 457 NF 458 (459)
Q Consensus 457 ~~ 458 (459)
|+
T Consensus 430 ~~ 431 (538)
T 3qan_A 430 DF 431 (538)
T ss_dssp SH
T ss_pred CH
Confidence 85
No 18
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=1.4e-85 Score=687.87 Aligned_cols=389 Identities=33% Similarity=0.573 Sum_probs=369.6
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~ 145 (459)
.++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.+
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERAS 84 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999876778999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHHH
Q 012658 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (459)
Q Consensus 146 ~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (459)
+|++++++|+|||+.++. .|+..+++.++||++++++..+...+.. .+...+..++|+|||++|+|||||+...++++
T Consensus 85 ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 163 (479)
T 2imp_A 85 EISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKM 163 (479)
T ss_dssp HHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHH
Confidence 999999999999999876 6999999999999998887766654432 34567899999999999999999999999999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.+.+..|.+|++||+|.||||+.+|+.|++.+++
T Consensus 164 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 243 (479)
T 2imp_A 164 APALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243 (479)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999987
Q ss_pred cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCC-CC
Q 012658 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-GG 383 (459)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~-~~ 383 (459)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++ ++
T Consensus 244 -~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 322 (479)
T 2imp_A 244 -NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERND 322 (479)
T ss_dssp -TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSS
T ss_pred -cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 323 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~ 397 (479)
T 2imp_A 323 IAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTL 397 (479)
T ss_dssp CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCH
Confidence 999999999999999999999999999999999753346899999999999999999999999999999999985
No 19
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.6e-85 Score=687.80 Aligned_cols=390 Identities=36% Similarity=0.617 Sum_probs=372.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999887889999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||..++. .|+..+++.++||+.++++..+...+.. .+...+..++|+|||++|+|||||+...+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 9999999999999999876 5999999999999998887766555432 4567889999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|.+||+||+|.||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999988
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 399 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE 399 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCH
Confidence 999999999999999999999999999999999765456899999999999999999999999999999999985
No 20
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.5e-86 Score=695.99 Aligned_cols=392 Identities=26% Similarity=0.429 Sum_probs=370.0
Q ss_pred CCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 012658 62 KVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (459)
Q Consensus 62 ~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~ 141 (459)
++...++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+
T Consensus 23 ~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 100 (521)
T 4e4g_A 23 MMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLN 100 (521)
T ss_dssp -CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHH
T ss_pred hhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 34556899999999887889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhh
Q 012658 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (459)
Q Consensus 142 ~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (459)
+|.++|++++++|+|||+.++. .|+..+++.++||+++.+.+.+...+. ..+...++.++|+|||++|+|||||+.+.
T Consensus 101 ~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 179 (521)
T 4e4g_A 101 DNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIP 179 (521)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHH
Confidence 9999999999999999999976 599999999999999887776654331 23566889999999999999999999999
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.+..|+.||+||+|.||||+.+|+.|++
T Consensus 180 ~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~ 258 (521)
T 4e4g_A 180 MWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYG 258 (521)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 4566799999999999999999999999999
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCc-chHHHHHHHHHHHHhhccCCC
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~-v~d~f~~~l~~~~~~~~vG~p 379 (459)
.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|+|
T Consensus 259 ~aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~ 337 (521)
T 4e4g_A 259 TAAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPY 337 (521)
T ss_dssp HHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCT
T ss_pred HHhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCC
Confidence 9987 89999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc----CCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
+++++++||+++..+++++.++|++++++||++++||... ..+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 338 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 417 (521)
T 4e4g_A 338 TDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRA 417 (521)
T ss_dssp TCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCB
T ss_pred CCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEe
Confidence 9999999999999999999999999999999999999652 246999999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 418 ~~~ 420 (521)
T 4e4g_A 418 RNY 420 (521)
T ss_dssp SSH
T ss_pred CCH
Confidence 985
No 21
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=9.5e-86 Score=693.63 Aligned_cols=387 Identities=40% Similarity=0.680 Sum_probs=369.5
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++
T Consensus 28 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 28 LHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999876788999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++++++|+|||+.++. .|+..+++.++||++++++..+...+. ..+...++.++|+|||++|+|||||+.+.+++++
T Consensus 106 la~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 184 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIA 184 (515)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhh
Confidence 99999999999999987 799999999999999998877765554 3355678999999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|..||+||+|.||||+.+|+.|++.+++
T Consensus 185 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~- 263 (515)
T 2d4e_A 185 PALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD- 263 (515)
T ss_dssp HHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-
T ss_pred HHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999777899999999999999999999999999999987
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 264 ~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 343 (515)
T 2d4e_A 264 HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETE 343 (515)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC--------CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+|
T Consensus 344 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~ 422 (515)
T 2d4e_A 344 VGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKD 422 (515)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCC
Confidence 99999999999999999999999999999997643 2699999999999 99999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 423 ~ 423 (515)
T 2d4e_A 423 E 423 (515)
T ss_dssp H
T ss_pred H
Confidence 5
No 22
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.2e-85 Score=690.53 Aligned_cols=395 Identities=39% Similarity=0.674 Sum_probs=376.0
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHH
Q 012658 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (459)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l 140 (459)
+++...++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|
T Consensus 2 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 79 (490)
T 2ve5_A 2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDIL 79 (490)
T ss_dssp CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 345567899999999887889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhh
Q 012658 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (459)
Q Consensus 141 ~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (459)
++|.++|++++++|+|||..++...|+..+++.++||+++++++.+...+...+...++.++|+|||++|+|||||+...
T Consensus 80 ~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~ 159 (490)
T 2ve5_A 80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHH
Confidence 99999999999999999999987569999999999999999887666555445677889999999999999999999999
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|..||+||+|.||||+.+|+.|++
T Consensus 160 ~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~ 239 (490)
T 2ve5_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HH-HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 301 LA-AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 301 ~~-a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
.+ ++ +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 240 ~a~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 318 (490)
T 2ve5_A 240 SASSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred hchhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99 76 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC----CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEec
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKVLILISPASISPNILHTFNG 455 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~ 455 (459)
+|+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~ 398 (490)
T 2ve5_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEe
Confidence 99999999999999999999999999999999999997632 36899999999999999999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 399 ~~~ 401 (490)
T 2ve5_A 399 DDE 401 (490)
T ss_dssp SCH
T ss_pred CCH
Confidence 985
No 23
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=1.1e-85 Score=689.50 Aligned_cols=388 Identities=36% Similarity=0.605 Sum_probs=367.4
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.+ ++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999997655 8899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++...|+..+++.++||+++++++.+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 999999999999999987655999999999999999888766554432 2446788999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++ +|+|+||+|+|.+.+.+..|++||+||+|.||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999987888999999999999999999999999999998
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 259 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 259 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred h-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCC-CeEEeCCc-ccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||++++.+++++.++|++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNE 413 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCH
Confidence 99999999999999999999999999 99999997 43 26899999999999999999999999999999999985
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2.1e-85 Score=688.98 Aligned_cols=384 Identities=32% Similarity=0.481 Sum_probs=365.9
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|++|.
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999887789999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC--C----CceEEEEEccceEEEEEcCCCchHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (459)
++|++++++|+|||+.++.. |+..+++.++||+++++++.+...+.. . +...++.++|+|||++|+|||||+.
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 99999999999999999864 999999999999999888766544322 1 4567889999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.+.++.|..||+||+|.||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
++.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 98875 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|+ +++++||+++..+++++.++|++++++||++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 99 9999999999999999999999999999999999974 5899999999999999999999999999999999985
No 25
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=1.2e-84 Score=681.40 Aligned_cols=385 Identities=35% Similarity=0.568 Sum_probs=366.6
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+. ++++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++
T Consensus 14 ~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (487)
T 2w8n_A 14 DSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKDD 89 (487)
T ss_dssp SEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999753 7899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (459)
|++++++|+|||+.++. .|+..+++.++||+++++++.+...+. ..+...+..++|+|||++|+|||||+...+++++
T Consensus 90 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (487)
T 2w8n_A 90 LARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVG 168 (487)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 99999999999999886 499999999999999988877665443 2356778999999999999999999999999999
Q ss_pred HHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeec---CCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 226 ~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~---g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |.+.+.+..|.+|++||+|.||||+.+|+.|++.+
T Consensus 169 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 248 (487)
T 2w8n_A 169 AALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHA 248 (487)
T ss_dssp HHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 86778899999999999999999999999999999
Q ss_pred HhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHh-hccCCCCC
Q 012658 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPFK 381 (459)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~-~~vG~p~~ 381 (459)
++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|++
T Consensus 249 a~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~ 327 (487)
T 2w8n_A 249 AN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFE 327 (487)
T ss_dssp HT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCccc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCc-eEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 382 ~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++++||++++.+++++.++|++++++|+++++||... .+|+ |++|||+.+++++|++++||+||||++|++|+|+
T Consensus 328 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 404 (487)
T 2w8n_A 328 EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTE 404 (487)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCH
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCH
Confidence 99999999999999999999999999999999999764 3689 9999999999999999999999999999999985
No 26
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2e-84 Score=680.47 Aligned_cols=388 Identities=29% Similarity=0.466 Sum_probs=367.6
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999887889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC--CCceEEEEEccceEEEEEcCCCchHHhhH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (459)
.++|++++++|+|||+.++.. |+..+++.++|++.+.+.+.+...+.. .+...++.++|+|||++|+|||||+...+
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999875 999999999999999988777665532 35678999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEeecCCCchHHH-HHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 222 WKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 222 ~~l~~ALaaGN~VVlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
+++++||++||+||+|||+.+|+++ ..|+++|.++|+|+|+||+|+|++.+.+..|++||+||+|.||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999987779999999999999999999999999999
Q ss_pred HHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCC
Q 012658 301 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPF 380 (459)
Q Consensus 301 ~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~ 380 (459)
.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.
T Consensus 242 ~aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9987 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 321 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 395 (485)
T 4dng_A 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSD 395 (485)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSH
T ss_pred cCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCH
Confidence 99999999999999999999999999999999999975 5899999999999999999999999999999999985
No 27
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=2.8e-84 Score=680.60 Aligned_cols=387 Identities=27% Similarity=0.454 Sum_probs=365.2
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.+++||||+|+. ++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 98 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREKI 98 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 458899999994 678999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++ ..|+..+++.++|++++++++.+...+.. .+...+..++|+|||++|+|||||+.+.+++
T Consensus 99 ~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (500)
T 2j6l_A 99 QVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWN 177 (500)
T ss_dssp HHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHH
Confidence 999999999999999987 46999999999999998887766654432 2445678899999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHH----HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~----~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
+++||++||+||+|||+.+|+++..|++++. ++|+|+|++|+|+| +.+.+..|..|++||+|.||||+.+|+.|+
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~ 256 (500)
T 2j6l_A 178 NAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVG 256 (500)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999988866 46999999999999 788999999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.+++ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|
T Consensus 257 ~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 335 (500)
T 2j6l_A 257 LMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNP 335 (500)
T ss_dssp HHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCc
Confidence 99987 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 336 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (500)
T 2j6l_A 336 WDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414 (500)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCH
T ss_pred ccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCH
Confidence 9999999999999999999999999999999999999764456999999999999999999999999999999999985
No 28
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.4e-84 Score=681.18 Aligned_cols=391 Identities=32% Similarity=0.529 Sum_probs=371.5
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHH
Q 012658 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (459)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l 140 (459)
..+...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (508)
T 3r64_A 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL 85 (508)
T ss_dssp TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence 556667899999999887889999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC--CCceEEEEEccceEEEEEcCCCchHH
Q 012658 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 141 ~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (459)
++|.++|++++++|+|||..++.. |+..+++.++|++.++++..+ ..+.. .+...++.++|+|||++|+|||||+.
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 163 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN 163 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence 999999999999999999999865 999999999999998887665 44422 35678899999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHH-HHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~-~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 297 (459)
..++++++||++||+||+|||+.+|+++ ..|++++.++|+|+|++|+|+|++.+.++.|++||+||+|.||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~ 243 (508)
T 3r64_A 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243 (508)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999987889999999999999999999999999
Q ss_pred HHHHHHhc-CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc
Q 012658 298 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (459)
Q Consensus 298 i~~~~a~~-~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v 376 (459)
|++.+++. +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99988742 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecC
Q 012658 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGE 456 (459)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~ 456 (459)
|+|.++++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 58999999999999999999999999999999999
Q ss_pred CC
Q 012658 457 NF 458 (459)
Q Consensus 457 ~~ 458 (459)
|+
T Consensus 401 ~~ 402 (508)
T 3r64_A 401 DE 402 (508)
T ss_dssp SH
T ss_pred CH
Confidence 85
No 29
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=3.6e-84 Score=676.64 Aligned_cols=376 Identities=28% Similarity=0.495 Sum_probs=354.0
Q ss_pred ceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 012658 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (459)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l 147 (459)
+||||+|+.+ ++ ++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 56 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHH
Q 012658 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (459)
Q Consensus 148 ~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (459)
++++++|+|||..++. .|+..+++.++||+.+++++.+...+.+ +...++.++|+|||++|+|||||+.+.++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999976 5999999999999999988776665544 6678899999999999999999999999999999
Q ss_pred HhcCCeEEeecCCCchHHHHHHHHHHHHc----CCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 228 LACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 228 LaaGN~VVlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
|++||+||+|||+.+|+++..|++++.++ |+|+|++|+|+|++.+.+..|..||+||+|.||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988888999999999999999999999999998875
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+++||+++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~ 381 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE 381 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH
Confidence 99999999999999999999999999999999965 5899999999 9999999999999999999999986
No 30
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=5.5e-84 Score=680.84 Aligned_cols=386 Identities=32% Similarity=0.516 Sum_probs=364.2
Q ss_pred cCceecCEeeeCCCCCeeeeeCCC-CCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.++||||+|+. ++++++++||+ ||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 38 ~~~~i~G~~~~--~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVD--TKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEEC--CSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEec--CCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 47899999996 46789999999 6999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC--CCCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
++|++++++|+|||+.++. .|+..+++.++||+++++++.+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999986 69999999999999999888765432 22345678899999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|.+.+.+..|++||+||+|.||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred Hh-----cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccC
Q 012658 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (459)
Q Consensus 303 a~-----~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG 377 (459)
++ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 71 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+| ++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 430 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999999 89999975334699999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 431 ~ 431 (516)
T 1uzb_A 431 F 431 (516)
T ss_dssp H
T ss_pred H
Confidence 5
No 31
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=7.2e-84 Score=674.08 Aligned_cols=372 Identities=26% Similarity=0.415 Sum_probs=358.1
Q ss_pred eeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhh
Q 012658 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161 (459)
Q Consensus 82 ~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~ 161 (459)
+++++||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCC
Q 012658 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (459)
Q Consensus 162 a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~ 241 (459)
+. .|+..+++.++|++++++++.+...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 87 69999999999999999888776555445678899999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEE
Q 012658 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (459)
Q Consensus 242 ~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~i 321 (459)
+|+++..|++++.++|+|+|++|+|+|++.+.+. |..||+||+|.||||+.+|+.|++.+++ ++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999998777888 9999999999999999999999999987 8999999999999999
Q ss_pred EccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHH
Q 012658 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (459)
Q Consensus 322 V~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~ 401 (459)
|++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||+++..+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 376 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDD 376 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCH
Confidence 999999999999999765567999999999999999999999999999999999985
No 32
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=6.5e-84 Score=676.03 Aligned_cols=388 Identities=30% Similarity=0.490 Sum_probs=366.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999876788999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-CCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
++|++++++|+|||+.++. .|+..+++.++|++.+.+.+.+...+ ...+...+..++|+|||++|+|||||+...+++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999998875 69999999999999877776655433 123456788999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+| +.+.+..|++|++||+|.||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999988
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCce-eEeeCcchHHHHHHHHHHHHhhccCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~-v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~ 382 (459)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++| +|||++ ||+|+++|+++++++++|+|+++
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 7 89999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 383 ~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++++||+++..+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~ 395 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNL 395 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCH
Confidence 99999999999999999999999999999999996432 36899999999999999999999999999999999985
No 33
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3.5e-84 Score=677.50 Aligned_cols=388 Identities=34% Similarity=0.570 Sum_probs=367.4
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
...++||||+|+.+.++++++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 356899999999988889999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (459)
.++|++++++|+|||+.++...|+..+++.++|+++++++..+... +...+..++|+|||++|+|||||+...+++
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999998667999999999999999887665432 235788999999999999999999999999
Q ss_pred HHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHH
Q 012658 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (459)
Q Consensus 224 l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a 303 (459)
+++||++||+||+|||+.+|+++..|++++.++|+|+|+||+|+|++.+.+..|..||+||.|.||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999888
Q ss_pred hcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCC
Q 012658 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (459)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~ 383 (459)
+ +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|++++
T Consensus 240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc-C--CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL-G--AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~-~--~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 319 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 319 TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 999999999999999999999999999999999432 1 46999999999999999999999999999999999985
No 34
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=9.8e-84 Score=673.26 Aligned_cols=382 Identities=29% Similarity=0.438 Sum_probs=361.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 79 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDK 79 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 347899999997533 899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCC-CC----ceE-EEEEccceEEEEEcCCCchHH
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPLL 218 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~~ 218 (459)
++|++++++|+|||+.++. .|+..+++.++|++++++++.+...+.. .+ ... +..++|+|||++|+|||||+.
T Consensus 80 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 80 EKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 9999999999999999875 6999999999999999887665543322 23 356 899999999999999999999
Q ss_pred hhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHH
Q 012658 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (459)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 298 (459)
..++++++||++||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|.+.+.+..|..|++||+|.||||+.+|+.|
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i 238 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999777789999999999999999999999999
Q ss_pred HHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCC
Q 012658 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (459)
Q Consensus 299 ~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~ 378 (459)
++.++ ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 239 ~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 239 GKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp HHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred HHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 98875 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
|.+ ++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999 999999999999999999999999999999999975 4899999999999999999999999999999999985
No 35
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.9e-83 Score=669.43 Aligned_cols=385 Identities=29% Similarity=0.390 Sum_probs=365.0
Q ss_pred CceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 012658 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (459)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~ 146 (459)
++||||+|+.+ ++.+++++||.||+++++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.++
T Consensus 7 ~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999976 457899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHH
Q 012658 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (459)
Q Consensus 147 l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (459)
|++++++|+|||+.++. .|+..+++.++|++.+.+...+...+...+...+..++|+|||++|+|||||+...++++++
T Consensus 84 la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999986 69999999999999988887766543223445677799999999999999999999999999
Q ss_pred HHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcC
Q 012658 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (459)
Q Consensus 227 ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~ 306 (459)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+.+..|..||+||+|.||||+.+|+.|++.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999999999999999999 67899999999999999999999999999999887 8
Q ss_pred CCce-EEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcc-hHHHHHHHHHHHHhhccCC-CCCCC
Q 012658 307 LKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGG 383 (459)
Q Consensus 307 ~~pv-~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v-~d~f~~~l~~~~~~~~vG~-p~~~~ 383 (459)
++|+ ++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 384 ~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++||+++..+++++.++|++++++||++++||.....+|+|++|||+. ++++|++++||+||||++|++|+|+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~ 394 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDF 394 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCH
Confidence 9999999999999999999999999999999997655679999999998 9999999999999999999999985
No 36
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.1e-83 Score=675.72 Aligned_cols=383 Identities=26% Similarity=0.387 Sum_probs=362.7
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
..++||||+|+.+ + ++++++||+||+++++++.++.+|++++++.|++||+. .|+.++..+|.++|+++++.|++|.
T Consensus 18 ~~~~~i~g~~~~~-~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGS-G-QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECC-S-CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecC-C-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 4578999999975 3 78999999999999999999999999999999999862 4999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC---CC--CceEEEEEccceEEEEEcCCCchHHh
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPLLM 219 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~--~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (459)
++|++++++|+|||+.++. .|+..+++.++||+.+++++.+...+. .. +...+..++|+|||++|+|||||+.+
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999987 699999999999999998876665443 22 33678999999999999999999999
Q ss_pred hHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHH
Q 012658 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (459)
Q Consensus 220 ~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 299 (459)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++ +.+..|..|++||+|.||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999976 8899999999999999999999999999
Q ss_pred HHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCC
Q 012658 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (459)
Q Consensus 300 ~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p 379 (459)
+.++ +||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCC-ceEecEEEeeCC---CCCCCcCcCCCcceEEEEec
Q 012658 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---VLILISPASISPNILHTFNG 455 (459)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~PTvl~~v~---~~~~i~~~EifgPvl~v~~~ 455 (459)
+++++++||++++.+++++.++|++++++||++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 58 999999999999 99999999999999999999
Q ss_pred CCC
Q 012658 456 ENF 458 (459)
Q Consensus 456 ~~~ 458 (459)
+|+
T Consensus 407 ~~~ 409 (501)
T 1uxt_A 407 KDL 409 (501)
T ss_dssp SSH
T ss_pred CCH
Confidence 985
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=9.1e-83 Score=674.87 Aligned_cols=388 Identities=25% Similarity=0.345 Sum_probs=363.1
Q ss_pred CccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012658 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (459)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~ 142 (459)
...++||||+|+.+ +.++.++||.| |+++++++.++.+|+++|++.|++||+ .|+.++..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 45689999999974 34778999998 899999999999999999999999999 99999999999999999999999
Q ss_pred c-HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccC-CCCCceEEEEEccceEEEEEcCCCchHHhh
Q 012658 143 H-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (459)
Q Consensus 143 ~-~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (459)
+ +++|++++++|+|||+.++...++..+++.++|++.+++++.+.... .+.+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 8 99999999999999999987645999999999999999888764432 222344566777889999999999999999
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
.+++++|| +||+||+|||+.+|+++..|+++|.++|+|+|+||+|+|++.++++.|..||+|++|.||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhcCCC------ceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhh
Q 012658 301 LAAKSNLK------PVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (459)
Q Consensus 301 ~~a~~~~~------pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~ 374 (459)
.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++
T Consensus 297 ~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 9987 677 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHh-CCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEE
Q 012658 375 VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHT 452 (459)
Q Consensus 375 ~vG~p-~~~~~~~Gpl~~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v 452 (459)
++|+| +|+++++||++++.+++++.++|+++++ +|+++++||.....+|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876668999999999999999999999999999999
Q ss_pred EecCC
Q 012658 453 FNGEN 457 (459)
Q Consensus 453 ~~~~~ 457 (459)
++|+|
T Consensus 456 ~~~~d 460 (563)
T 4e3x_A 456 YVYPD 460 (563)
T ss_dssp EEECG
T ss_pred EEECC
Confidence 99985
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=6.4e-81 Score=650.49 Aligned_cols=375 Identities=26% Similarity=0.417 Sum_probs=356.9
Q ss_pred CCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCC
Q 012658 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (459)
Q Consensus 79 ~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp 158 (459)
+..+++++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|+++++.|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 456799999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhhhhhcchHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeec
Q 012658 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (459)
Q Consensus 159 ~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKp 238 (459)
+.++. .|+..+++.++|+++++++..+.......+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 83 ~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 99976 59999999999999998887665522223567889999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcC
Q 012658 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (459)
Q Consensus 239 s~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~ 318 (459)
|+.+|+++..|+++|.++|+|+|++|+|+| +.+.+..|+.|++|+.|.||||+.+|+.|++.+++ +++|+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999998 56778999999999999999999999999999988 8999999999999
Q ss_pred cEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHH
Q 012658 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (459)
Q Consensus 319 p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i 398 (459)
|+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~ 379 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDA 379 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCH
Confidence 999999999999999999865567999999999999999999999999999999999985
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=2.4e-80 Score=690.17 Aligned_cols=388 Identities=30% Similarity=0.479 Sum_probs=368.0
Q ss_pred ccCceecCEeeeCCCCCeeeeeCCCC-CCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 012658 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (459)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~ 143 (459)
..++||||+|+. ++++++++||+| |+++++++.++.+|+++|++.|++||. .|+.++..+|.++|++++++|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999986 578999999998 999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCcccCC-CCCceEEEEEccceEEEEEcCCCchHHhhHH
Q 012658 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (459)
Q Consensus 144 ~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (459)
.++|++++++|+|||+.++. .|+..+++.++||+.+++++.+...+. ..+..++..++|+|||++|+|||||+.+.++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 99999999999999999976 599999999999999998876654332 3466788999999999999999999999999
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
++++||++||+||+|||+.+|+++..++++|.++|+|+|+||+|+|++.++++.|++||+|++|+||||+++|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred Hh-----cCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccC
Q 012658 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (459)
Q Consensus 303 a~-----~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG 377 (459)
+. ++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 73 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+|.++++++||+++..+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d 924 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKD 924 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCC
Confidence 99999999999999999999999999999999 99999976544599999999999999999999999999999999998
Q ss_pred C
Q 012658 458 F 458 (459)
Q Consensus 458 ~ 458 (459)
+
T Consensus 925 ~ 925 (1026)
T 4f9i_A 925 F 925 (1026)
T ss_dssp H
T ss_pred H
Confidence 5
No 40
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=7.3e-80 Score=643.85 Aligned_cols=373 Identities=27% Similarity=0.354 Sum_probs=349.5
Q ss_pred CCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCC
Q 012658 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (459)
Q Consensus 78 ~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk 157 (459)
.+++|++++||+||+++++++.++.+|+++|++.|++||+ .|++++..+|.++|+++++.|++|.++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ChhhhhhcchHHHHHHHHHHHHhhhhhcCccc-CC-CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEE
Q 012658 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235 (459)
Q Consensus 158 p~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV 235 (459)
+... ..|+...+..+++|+..++++..... +. ..+...+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 81 ~~~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH--HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8544 35999999999999988877654332 22 23455677889999999999999999999999999999999999
Q ss_pred eecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecC
Q 012658 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (459)
Q Consensus 236 lKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelg 315 (459)
+|||+.+|+++..+++++.++|+|+|++|+++| +.+.+..|..| +++|.||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 66788899876 8999999999999999999988 7899999999
Q ss_pred CcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHH
Q 012658 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395 (459)
Q Consensus 316 G~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~ 395 (459)
||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+|.++++++||+++..++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEeCCcccC-CCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 396 EKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 396 ~~i~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+++.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~ 378 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDV 378 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCH
Confidence 9999999999999999999997543 46899999999999999999999999999999999985
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1e-79 Score=651.27 Aligned_cols=384 Identities=23% Similarity=0.300 Sum_probs=349.0
Q ss_pred cCceecCEeeeCCCCCeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHh-ccCCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 012658 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHN 144 (459)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A-~~~g~W~~~~~~~R~~iL~~~a~~l~~~~ 144 (459)
.++||||+|+.+.+ .+++++||.||+++++++.++ +|+++|++.|++| |+ .|+.++..+|.++|+++++.|++|.
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 57899999997644 579999999999999999988 9999999999999 58 9999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhhcCc-------ccCCC--CCceEEEEEccc-eEEEEEcCCC
Q 012658 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL-------TAPAD--GPYHVQTLHEPI-GVAGQIIPWN 214 (459)
Q Consensus 145 ~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~~~~-------~~~~~--~~~~~~~~~~P~-GVv~~i~p~n 214 (459)
++|++++++|+|||+.++. .|+..+++.++||+.+++++.+. ..+.. .....+..++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 9999999999999999886 59999999999999988776432 11221 222467889997 9999999999
Q ss_pred chHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcC-CCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChH
Q 012658 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (459)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aG-lP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~ 293 (459)
||+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|+||+|+|++.+++..| +++|+|.||||+.
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~ 239 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSAD 239 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 89999999999654433222 5799999999999
Q ss_pred HHHHHHHHHH-hcCCCceEEecCCcCcEEEccCC-----CHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHH
Q 012658 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (459)
Q Consensus 294 ~g~~i~~~~a-~~~~~pv~lelgG~~p~iV~~dA-----Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l 367 (459)
+|+.|++.++ ..++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 240 ~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 319 (534)
T 2y53_A 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319 (534)
T ss_dssp HHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence 9999998775 23899999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCccc------CCCCceEecEEEeeCCCC--CC
Q 012658 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKVL--IL 439 (459)
Q Consensus 368 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~PTvl~~v~~~--~~ 439 (459)
+++++++++|+|+++++++||++++.+++++.++|+++ ++|+++++||... ..+|+|++|||+.+++++ |+
T Consensus 320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~ 398 (534)
T 2y53_A 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL 398 (534)
T ss_dssp HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSS
T ss_pred HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCH
Confidence 99999999999999999999999999999999999999 6899999999642 135899999999999987 69
Q ss_pred CcCcCCCcceEEEEecC---CC
Q 012658 440 ISPASISPNILHTFNGE---NF 458 (459)
Q Consensus 440 i~~~EifgPvl~v~~~~---~~ 458 (459)
+++||+||||++|++|+ |+
T Consensus 399 i~~eEiFGPVl~v~~~~~~~~~ 420 (534)
T 2y53_A 399 LHDVEVFGPVASVAPYRVTTDT 420 (534)
T ss_dssp TTTCCCSSSEEEEEEECCCCC-
T ss_pred HHhCCCcCCEEEEEEECCCCCc
Confidence 99999999999999999 75
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=8.7e-76 Score=610.46 Aligned_cols=363 Identities=24% Similarity=0.348 Sum_probs=324.0
Q ss_pred CeeeeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChh
Q 012658 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (459)
Q Consensus 81 ~~~~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~ 160 (459)
..+++.||+||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4678999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhcchHHHHHHHHHHHHhhhhhcCc-ccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEe
Q 012658 161 QSAQTEVPMTTRLFRYYAGWADKIQGL-TAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236 (459)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 236 (459)
++...|+..+++.++|+++.+++.... ..+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 987679999999999999988776542 2221 134678899999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCC
Q 012658 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316 (459)
Q Consensus 237 Kps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG 316 (459)
|||+.+|+++..|++++.++ +|+|+||+|+| +.+.+..|+. ++||+|.||||+.+|+.|++.+++ ++||+++|+||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999999 99999999999 7788899998 689999999999999999999987 89999999999
Q ss_pred cCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHH
Q 012658 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 396 (459)
Q Consensus 317 ~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~ 396 (459)
|||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||++++.+++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988 7776 999999999999
Q ss_pred HHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 397 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 397 ~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++.++|+++ ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 315 rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 372 (457)
T 3lns_A 315 RLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSV 372 (457)
T ss_dssp HHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCH
T ss_pred HHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCH
Confidence 999999985 35999999753 36899999999999999999999999999999999985
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.7e-76 Score=620.38 Aligned_cols=375 Identities=22% Similarity=0.273 Sum_probs=340.0
Q ss_pred CCccCceecCEeeeCCCCCeeeeeCCCCCCEEE-EEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHH
Q 012658 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (459)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~ 141 (459)
....++||||+|+.+.+ ++||+||++++ +++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 34458999999997532 99999999998 9999999999999999999999 9999999999999999999999
Q ss_pred HcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHHHhhhhh--cCccc----CC---CCCceEEEEEccceEEEEEcC
Q 012658 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQIIP 212 (459)
Q Consensus 142 ~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a~~~~~~--~~~~~----~~---~~~~~~~~~~~P~GVv~~i~p 212 (459)
+|.++|++++++|+|||+.++. .|+..+++.++||++++++. .+... +. ..+...+..++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 9999999999999999998876 59999999999999988872 22211 11 123456889999999999999
Q ss_pred CCchHHhhH--HHHHHHHhcCCeEEeecCCCchHHHHHHHHHH----HHcCCCCCcEEeecCCChhHHHHHHcCCCccEE
Q 012658 213 WNFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286 (459)
Q Consensus 213 ~n~P~~~~~--~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v 286 (459)
||||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|+||+|+|.+.+.+..|+.||+||+|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 99999999999999999999999999999875 568999999999999888899999999999999
Q ss_pred EeeCChHHHHHHHHHHHhcCC--CceEEecCCcCcEEEccCC---CHHHHHHHHHHHhhccCCCccccCceeEeeCc-ch
Q 012658 287 AFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VY 360 (459)
Q Consensus 287 ~ftGs~~~g~~i~~~~a~~~~--~pv~lelgG~~p~iV~~dA---Dld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~-v~ 360 (459)
.||||+.+|+.|++.+++ ++ +|+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|||||++ +|
T Consensus 259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999987 77 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCC---
Q 012658 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVL--- 437 (459)
Q Consensus 361 d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~--- 437 (459)
|+|+++|+++++++++ ++.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 338 d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 9999999999998864 356899998888877777653 479999999974 6999999999998888
Q ss_pred CCCcCcCCCcceEEEEecCCC
Q 012658 438 ILISPASISPNILHTFNGENF 458 (459)
Q Consensus 438 ~~i~~~EifgPvl~v~~~~~~ 458 (459)
|++++||+||||++|++|+|+
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~ 426 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSP 426 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSH
T ss_pred ChhhcccccCCeEEEEecCCH
Confidence 899999999999999999985
No 44
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=4.4e-74 Score=598.37 Aligned_cols=347 Identities=27% Similarity=0.353 Sum_probs=317.9
Q ss_pred cCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHHHH
Q 012658 99 EGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYA 178 (459)
Q Consensus 99 ~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~~a 178 (459)
..+.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.++|++++++|+|||+.++...|+..+...+++++
T Consensus 14 ~~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~ 91 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMI 91 (469)
T ss_dssp ----CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567799999999999999 99999999999999999999999999999999999999999987679999999999888
Q ss_pred HhhhhhcCcc----cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH
Q 012658 179 GWADKIQGLT----APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (459)
Q Consensus 179 ~~~~~~~~~~----~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~ 254 (459)
.......... .....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~ 171 (469)
T 3sza_A 92 QKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIP 171 (469)
T ss_dssp HHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHH
Confidence 7665543221 111224568899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHH
Q 012658 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAEL 334 (459)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~ 334 (459)
++ +|+|++|+|+|+ .+.+..|+.| +||+|.||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.
T Consensus 172 ~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 172 QY-LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp HH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred Hh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 98 999999999994 4556677777 89999999999999999999987 89999999999999999999999999999
Q ss_pred HHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEe
Q 012658 335 AHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (459)
Q Consensus 335 i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~ 414 (459)
+++++|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||+++..+++++.++| +||++++
T Consensus 248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~ 321 (469)
T 3sza_A 248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAY 321 (469)
T ss_dssp HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEE
T ss_pred HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEe
Confidence 9999999999999999999999999999999999999998 699999999999999999999999998 6999999
Q ss_pred CCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 415 GGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 415 gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
||... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 322 GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 364 (469)
T 3sza_A 322 GGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSL 364 (469)
T ss_dssp CCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSH
T ss_pred CCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCH
Confidence 99764 46899999999999999999999999999999999985
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.1e-74 Score=609.53 Aligned_cols=364 Identities=20% Similarity=0.264 Sum_probs=333.7
Q ss_pred CCCCCeeeeeCCCCCCEE-EEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc
Q 012658 77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN 155 (459)
Q Consensus 77 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~ 155 (459)
+.++++++++||+||+++ ++++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|++|.++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 446788999999999999 79999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCChhhhhhcchHHHHHHHHHHHHhhhh--hcCccc----CC--CCC-ceEEEEEccceEEEEEcCCCchHHhh--HHHH
Q 012658 156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKV 224 (459)
Q Consensus 156 Gkp~~~a~~~ev~~~~~~l~~~a~~~~~--~~~~~~----~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l 224 (459)
|||+.++. .|+..+++.++||++++++ ..+... +. ..+ ...+..++|+|||++|+|||||+.+. .+++
T Consensus 81 Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHH-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHH-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 99998764 6999999999999998876 333222 11 112 24678999999999999999999985 4999
Q ss_pred HHHHhcCCeEEeecCCCchHHHHHHHHHH----HHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 012658 225 GPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (459)
Q Consensus 225 ~~ALaaGN~VVlKps~~~p~~~~~l~~ll----~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 300 (459)
++||++||+||+|||+.+|+++..|++++ .++|+|+|++|+|+|.+.+.+..|++|++||+|.||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999987889999999999999999999999999999
Q ss_pred HHHhcCC--CceEEecCCcCcEEEccCCCHH--HHHHHHHHHhhccCCCccccCceeEeeCc-chHHHHHHHHHHHHhhc
Q 012658 301 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV 375 (459)
Q Consensus 301 ~~a~~~~--~pv~lelgG~~p~iV~~dADld--~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~-v~d~f~~~l~~~~~~~~ 375 (459)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9987 64 9999999999999999999999 99999999999999999999999999999 99999999999999887
Q ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHh-CCCeEEeCCcccCCCCceEecEEEeeCCCC---CCCcCcCCCcceEE
Q 012658 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKVL---ILISPASISPNILH 451 (459)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~---~~i~~~EifgPvl~ 451 (459)
+ ||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 3 688899999999999999994 7999999996 2899999999988888 99999999999999
Q ss_pred EEecCCC
Q 012658 452 TFNGENF 458 (459)
Q Consensus 452 v~~~~~~ 458 (459)
|++|+|+
T Consensus 385 v~~~~~~ 391 (510)
T 1ez0_A 385 IVVCENV 391 (510)
T ss_dssp EEEESSH
T ss_pred EEEeCCH
Confidence 9999984
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=8.2e-72 Score=620.36 Aligned_cols=352 Identities=30% Similarity=0.421 Sum_probs=333.6
Q ss_pred EecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHHH
Q 012658 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (459)
Q Consensus 97 v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~~ 176 (459)
++.++.+|+++|++.|++||. .|+.++..+|.++|+++++.|++|.++|++++++|+|||+.++. .|+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHH
Confidence 889999999999999999999 99999999999999999999999999999999999999999975 599999999999
Q ss_pred HHHhhhhhcCcc--cCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH
Q 012658 177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (459)
Q Consensus 177 ~a~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~ 254 (459)
|+.++++..+.. .+...+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998876643 344556788899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc--CCCceEEecCCcCcEEEccCCCHHHHH
Q 012658 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA 332 (459)
Q Consensus 255 ~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~--~~~pv~lelgG~~p~iV~~dADld~aa 332 (459)
++|+|+|+||+|+|++.+ +..|+.||+|++|+||||+++|+.|++.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998777 99999999999999999999999999998863 489999999999999999999999999
Q ss_pred HHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeE
Q 012658 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 412 (459)
Q Consensus 333 ~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v 412 (459)
+.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988 88
Q ss_pred EeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCC
Q 012658 413 ETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGEN 457 (459)
Q Consensus 413 ~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~ 457 (459)
+||... ..|+|++|||+.+ ++|.+++||+||||++|++|++
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~ 899 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRP 899 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECG
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCC
Confidence 888653 3599999999975 7899999999999999999985
No 47
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=8.8e-65 Score=526.99 Aligned_cols=335 Identities=18% Similarity=0.222 Sum_probs=289.7
Q ss_pred EecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHH-H
Q 012658 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R 175 (459)
Q Consensus 97 v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l-~ 175 (459)
++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++.++|+++++.|+|||..++...|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999999 9999999999999999999999999999999999999999987655777777766 3
Q ss_pred HHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHH-
Q 012658 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (459)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~- 254 (459)
++... +..+ ..+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 44321 1111 1222334556889999999999999999999999999999999999999999999999998888875
Q ss_pred ---HcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHH
Q 012658 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (459)
Q Consensus 255 ---~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~a 331 (459)
++|+|+|+||+|+|++.+.++.|+.||+|+.|.||||+.+++ .++. ++||+++|+|||+|+||++|||+|.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 799999999999998889999999999999999999998654 3444 78999999999999999999999999
Q ss_pred HHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCe
Q 012658 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (459)
Q Consensus 332 a~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~ 411 (459)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ .||++++++++++.++|+++.+.|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999865 39999999999999999977677888
Q ss_pred EEeCCccc---CCCCceEecEE-------EeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 412 LETGGERL---GAKGYYIKPTV-------FTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 412 v~~gg~~~---~~~g~~~~PTv-------l~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+ +||... ...|+|++||+ +.+++++|++++ |+||||++|++|+|+
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~ 350 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNF 350 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSH
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCH
Confidence 7 477532 23589999997 668899999886 899999999999985
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=8.1e-65 Score=528.90 Aligned_cols=338 Identities=17% Similarity=0.219 Sum_probs=296.4
Q ss_pred EEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCChhhhhhcchHHHHHHHH
Q 012658 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (459)
Q Consensus 96 ~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~~~a~~~ev~~~~~~l~ 175 (459)
.++.++.+|++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|+++++.|+|||..++...+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3556788999999999999999 99999999999999999999999999999999999999988765444444444444
Q ss_pred HHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHH----
Q 012658 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK---- 251 (459)
Q Consensus 176 ~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~---- 251 (459)
++....+ ..+ ..+.+.+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++
T Consensus 83 ~~~~~~~-~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDMK-TIG-MLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTCC-CSE-EEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhccc-ccc-eeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 3332211 111 1122345678889999999999999999999999999999999999999999999999998654
Q ss_pred HHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecC-CcCcEEEccCCCHHH
Q 012658 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDK 330 (459)
Q Consensus 252 ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelg-G~~p~iV~~dADld~ 330 (459)
++.++|+|+|+||+|+|++.+.+..|+.||+||+|.||||+.+ ++.+++ ++||+ +|+| ||+|+||++|||+|.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5688999999999999988899999999999999999999985 444554 78999 7888 999999999999999
Q ss_pred HHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHH-------HhhccCCCC-CCCCcccccCCHHHHHHHHHHH
Q 012658 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYI 402 (459)
Q Consensus 331 aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~-------~~~~vG~p~-~~~~~~Gpl~~~~~~~~i~~~i 402 (459)
|++.+++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999885 577899998 7889999999999999999999
Q ss_pred HHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+.++.+|+++++||.. +++++|++. +|+||||++|++|+|+
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~ 355 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETW 355 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSH
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCH
Confidence 9988999999999852 577888876 8999999999999985
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.5e-64 Score=523.87 Aligned_cols=322 Identities=19% Similarity=0.137 Sum_probs=259.2
Q ss_pred eeeCCCCCCEEEEEecCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHc-------C
Q 012658 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G 156 (459)
Q Consensus 84 ~v~~P~tg~~i~~v~~~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~-------G 156 (459)
-++||.||+++++++.++.+|++++++.|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 4789999999999999999999999999999999 999999999999999999999999999999999999 7
Q ss_pred CChh----hhhhcchHHHHHHHHHHHHhhhhhcCcccCCC---CCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHh
Q 012658 157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229 (459)
Q Consensus 157 kp~~----~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 229 (459)
||+. ++. .|+..+++.++|+++++++..+...+.. .+...++.++|+|||++|+||| |.... +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9987 343 6999999999999988877766553321 3446788999999999999887 87777 89999999
Q ss_pred cCCeEEeecCCCchHHHHHHHHHHHHc----CCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhc
Q 012658 230 CGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (459)
Q Consensus 230 aGN~VVlKps~~~p~~~~~l~~ll~~a----GlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~ 305 (459)
+||+||+|||+.+|+++..|++++.++ | |+|+||+|+| +.+++..|..||+||+|.||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 6778999999999999999999999999998875
Q ss_pred CCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCc
Q 012658 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (459)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~ 385 (459)
+||+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------
Confidence 799999999999999999999999999999999999 999999999999999998
Q ss_pred ccccCCHHHHHHHHHHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 386 ~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
||+ ++ +++++++++|++++.|+... ..|+|+ +++|++++||+||||++|++|+|+
T Consensus 295 -~p~-----~~---~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~ 349 (463)
T 2h5g_A 295 -TPL-----FD---QIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNV 349 (463)
T ss_dssp -SHH-----HH---HHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSH
T ss_pred -hHH-----HH---HHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCH
Confidence 343 23 45888889999998555422 235553 579999999999999999999985
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=6.3e-63 Score=513.94 Aligned_cols=314 Identities=17% Similarity=0.132 Sum_probs=266.1
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhhcchHH-HHHHHHHHH
Q 012658 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA 178 (459)
Q Consensus 104 dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~----~~a~~~ev~~-~~~~l~~~a 178 (459)
.++++++.|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||. .++...|+.. +...++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58999999999999 9999999999999999999999999999999999999998 7765568888 889999999
Q ss_pred Hhhhhhc------CcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHH
Q 012658 179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (459)
Q Consensus 179 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l 249 (459)
++++... +...+. +.+...+..++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8887765 333231 12455788999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEE
Q 012658 250 SKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (459)
Q Consensus 250 ~~ll~----~----aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~i 321 (459)
++++. + +|+|+|+||+|+ ++++++..|..||+||+|.||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6767889999999999999999999999998765 699999999999999
Q ss_pred EccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc---CCCCCCCCcccccCCHHHHHHH
Q 012658 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKI 398 (459)
Q Consensus 322 V~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v---G~p~~~~~~~Gpl~~~~~~~~i 398 (459)
|++|||+|.|++.+++++|.|+| .|++++|||||+++ |+|+++|+++++++++ |+|.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999997 87643
Q ss_pred HHH-HHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 399 LKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 399 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
.++ |++++ ++++||. | ++|||+ ++++|++++||+||||++|++|+|+
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~ 354 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTST 354 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSH
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCH
Confidence 345 66665 4677885 4 799997 7899999999999999999999985
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.6e-59 Score=486.25 Aligned_cols=307 Identities=19% Similarity=0.179 Sum_probs=257.6
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhhh-------cchHHH
Q 012658 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPMT 170 (459)
Q Consensus 102 ~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~----~~a~~-------~ev~~~ 170 (459)
.+|++++++.|++||. .|+.++..+|.++|+++++.|++|.++|++++++|+||+. .++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 9999999999999999999999999999999999999984 34432 378899
Q ss_pred HHHHHHHHHhhhhhcCcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHH
Q 012658 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (459)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~ 247 (459)
++.+++++.+++.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887642 333331 24567889999999999999998 8 688999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEeecCCCh-hHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEE
Q 012658 248 YVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (459)
Q Consensus 248 ~l~~ll----~~aGlP~g~v~vv~g~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV 322 (459)
.|++++ .++|+|+|+||+|+|.+. ..+..|..||+||.|.||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998655 5788898999999999999999999998764 6999999999999999
Q ss_pred ccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhcc---CCCCCCCCcccccCCHHHHHHHH
Q 012658 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKIL 399 (459)
Q Consensus 323 ~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~v---G~p~~~~~~~Gpl~~~~~~~~i~ 399 (459)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 6652 13
Q ss_pred HHHHHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
++|+++. + | ++ ++++|++++||+||||++|++|+|+
T Consensus 318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~ 353 (444)
T 4ghk_A 318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGI 353 (444)
T ss_dssp HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSH
T ss_pred HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCH
Confidence 5666542 1 2 22 3568999999999999999999985
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.5e-59 Score=484.18 Aligned_cols=305 Identities=20% Similarity=0.195 Sum_probs=267.6
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcCCCh----hhhh-------hcchHHH
Q 012658 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSA-------QTEVPMT 170 (459)
Q Consensus 102 ~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gkp~----~~a~-------~~ev~~~ 170 (459)
.++++++++.|++||+ .|+.++..+|.++|+++++.|++|.++|++++++|+|||. .++. ..|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 4689999999999999 9999999999999999999999999999999999999985 4443 2589999
Q ss_pred HHHHHHHHHhhhhhcCcccCC---CCCceEEEEEccceEEEEEcCCCchHHhhHHHHHHHHhcCCeEEeecCCCchHHHH
Q 012658 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (459)
Q Consensus 171 ~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~ 247 (459)
++.+++|+++++. .+...+. +.+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999988765 3433331 23455788999999999999886 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEeecCC-ChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEE
Q 012658 248 YVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (459)
Q Consensus 248 ~l~~ll~----~aGlP~g~v~vv~g~-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV 322 (459)
.|++++. ++|+|+|++|+|+|. +++.++.|..||+||+|.||||+.+|+.|++.+ .||+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 679999999999984 466789999999999999999999999998875 5899999999999999
Q ss_pred ccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHH
Q 012658 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (459)
Q Consensus 323 ~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i 402 (459)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999988652
Q ss_pred HHHHhCCCeEEeCCcccCCCCceEecEEEeeCCCCCCCcCcCCCcceEEEEecCCC
Q 012658 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKVLILISPASISPNILHTFNGENF 458 (459)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~~EifgPvl~v~~~~~~ 458 (459)
+.||... .| |+ ||| ++++|.+++||+||||++|++|+|+
T Consensus 298 ----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~ 336 (427)
T 1o20_A 298 ----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNV 336 (427)
T ss_dssp ----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSH
T ss_pred ----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCH
Confidence 2233321 12 33 996 3467899999999999999999985
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=90.28 E-value=16 Score=36.43 Aligned_cols=166 Identities=16% Similarity=0.124 Sum_probs=96.7
Q ss_pred CCCceEEEEEccceEEEEEcCCC---chHHhhHHHHHHHHhcCCe-EEeecCCCchHHHHHHHHHHHHcCCCCCcEEeec
Q 012658 192 DGPYHVQTLHEPIGVAGQIIPWN---FPLLMFAWKVGPALACGNT-IVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (459)
Q Consensus 192 ~~~~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~-VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~ 267 (459)
..|......+.|+--|++-.|.- ||-.. +...+||-.+|+. +|+..++..-.....+.-..+.+|+.+ +..
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l~Gv~e----Iy~ 192 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYISGVDR----VFR 192 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHHHTCCE----EEC
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHhcCCcE----EEE
Confidence 34667778899999999999944 55444 4558999999997 344333322112223333445566642 333
Q ss_pred CCChhHHHHHHc----CCCccEEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCc-EEE-ccCCCHHHHHHHHHHHhhc
Q 012658 268 GYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSP-FIV-CEDADVDKAAELAHYALFF 341 (459)
Q Consensus 268 g~~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p-~iV-~~dADld~aa~~i~~~~~~ 341 (459)
-.|.+.-.+|.- -|+||+|+=.|+.=+..+=.+. . +..-+=+. .|.+= +|| ++++|.+..+..++.-+=+
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v--~-g~VgIDm~-AGPSEilViAD~~a~p~~vAaDLlsQAEH 268 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLV--F-GQVGIDMV-AGPSEILVISDGRTDPDWIAMDLFSQAEH 268 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHH--B-TTBEECCC-CCCCEEEEEECSCSCHHHHHHHHHHHHTT
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHh--c-CCcCcccc-cccceEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 335555555554 5789999999997664321111 1 22222222 33333 333 4458999988887766544
Q ss_pred cCCCccccCceeEeeCcchHHHHHHHHHHHHh
Q 012658 342 NQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (459)
Q Consensus 342 ~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~ 373 (459)
... .+.++|..+ ++|.++..+++.+
T Consensus 269 d~~-----a~~iLvT~s--~~la~~V~~~i~~ 293 (423)
T 4gic_A 269 DED-----AQAILISPD--AAHLEAVQASIER 293 (423)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHH
T ss_pred CCC-----CeEEEEeCc--HHHHHHHHHHHHH
Confidence 332 345777766 5566666555544
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=73.94 E-value=75 Score=31.66 Aligned_cols=189 Identities=14% Similarity=0.114 Sum_probs=102.7
Q ss_pred chHHHHHHHHHHHHhhhhhcCcccCCCCCceEEEEEccceEEEEEcCC---CchHHhhHHHHHHHHhcCCeEEe--ecCC
Q 012658 166 EVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVL--KTAE 240 (459)
Q Consensus 166 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVl--Kps~ 240 (459)
-+..+.+.++.|...-.+ .........|......+.|+.-|++-.|+ -||-. .+...+||-.+|+.=|+ -|+.
T Consensus 87 ai~~A~~nI~~fH~~Q~~-~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~ 164 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKL-PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPP 164 (434)
T ss_dssp HHHHHHHHHHHHHHTTCC-CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHH-HHHHHHHHHHHTCSEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHhcC-CCceEEecCCcEEEEEEeehheEEEEecCCCCCchhH-HHHhhccHhhcCCCeEEEECCCC
Confidence 344555666655432111 11011112266677889999999999996 35544 45557999999987654 3432
Q ss_pred CchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHc----CCCccEEEeeCChHHHHHHHHHHHhcCCCceEEe-cC
Q 012658 241 QTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLE-LG 315 (459)
Q Consensus 241 ~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~~a~~~~~pv~le-lg 315 (459)
-.| .+.-..+.+|+.+ +..-.|.+.-.+|.- -|+||+|+=.|+.=+...= ++... ....|-.. ..
T Consensus 165 i~p----~iL~AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AK-r~Vs~-~~G~VgIDm~A 234 (434)
T 1kae_A 165 IAD----EILYAAQLCGVQD----VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK-RQVSQ-RLDGAAIDMPA 234 (434)
T ss_dssp CCH----HHHHHHHHTTCCE----EEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHHH-CTTSCEESCCC
T ss_pred CCH----HHHHHHHHcCCCE----EeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHH-HHhHh-hcCccccCCCC
Confidence 222 2233445566642 333224454455543 4889999999997653321 11111 11222222 23
Q ss_pred CcCcEEE--ccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHHHHHHHHHHh
Q 012658 316 GKSPFIV--CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK 373 (459)
Q Consensus 316 G~~p~iV--~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~~~l~~~~~~ 373 (459)
|.+=++| +++||.+..+..++.-+=... ..+.++|..+ +++.++..+++.+
T Consensus 235 GPSEilViAD~tAnp~~vAaDLLsQAEHd~-----~a~aiLvT~s--~~la~~V~~ev~~ 287 (434)
T 1kae_A 235 GPSEVLVIADSGATPDFVASDLLSQAEHGP-----DSQVILLTPA--ADMARRVAEAVER 287 (434)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHHTTCT-----TCEEEEEESC--HHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHhccCC-----CCcEEEEECC--HHHHHHHHHHHHH
Confidence 4443333 446899998888776554432 2445677665 4555555555543
No 55
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=67.18 E-value=8.2 Score=33.85 Aligned_cols=38 Identities=24% Similarity=0.445 Sum_probs=32.8
Q ss_pred hcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCC
Q 012658 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (459)
Q Consensus 229 aaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 269 (459)
.+||-+|+|..|.. +..++.++...++|++++..+.|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 37999999988664 788999999988999999999984
No 56
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=52.06 E-value=7.7 Score=32.35 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=51.2
Q ss_pred HHHHHHhcCCeEEeecCCCchHHHHHHHHHHHH-cCCCCCcEEeec-CCChhHHHHHHcCCCccEEEeeCC-------hH
Q 012658 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVS-GYGPTAGAALASHMEVDKLAFTGS-------TT 293 (459)
Q Consensus 223 ~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~-aGlP~g~v~vv~-g~~~~~~~~L~~~~~v~~v~ftGs-------~~ 293 (459)
+-...++.|..++- |.-|+ +.|.+ .|++-..++=++ +.++++++.+.+ ..|+.|.||-+ ..
T Consensus 23 ~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~-geIdlVInt~~pl~~~~h~~ 92 (134)
T 2xw6_A 23 QRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVAE-GRILAVIFFRDPLTAQPHEP 92 (134)
T ss_dssp HHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHT-TCEEEEEEECCTTTCCTTSC
T ss_pred HHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHHC-CCccEEEEccCcccCCCccc
Confidence 33444556766554 33344 44555 799977776666 545677777765 58999999977 33
Q ss_pred HHHHHHHHHHhcCCCceE
Q 012658 294 TGKIVLQLAAKSNLKPVT 311 (459)
Q Consensus 294 ~g~~i~~~~a~~~~~pv~ 311 (459)
.+..|.+.+.. ..+|+.
T Consensus 93 D~~~IrR~A~~-~~IP~~ 109 (134)
T 2xw6_A 93 DVQALLRVCDV-HGVPLA 109 (134)
T ss_dssp CSHHHHHHHHH-HTCCEE
T ss_pred hHHHHHHHHHH-cCCCeE
Confidence 56778888877 446665
No 57
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=51.56 E-value=72 Score=27.52 Aligned_cols=37 Identities=32% Similarity=0.544 Sum_probs=30.9
Q ss_pred hcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCC
Q 012658 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (459)
Q Consensus 229 aaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 269 (459)
..||-+|+|..+.. +..++.++...++| +++..+.|+
T Consensus 110 ~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 110 DSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp EETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 47999999988654 78899999998876 799999884
No 58
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=50.87 E-value=11 Score=34.38 Aligned_cols=69 Identities=13% Similarity=0.141 Sum_probs=46.4
Q ss_pred HHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHH
Q 012658 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (459)
Q Consensus 221 ~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 297 (459)
+..++-.+..||.||++.+... ....+..+|... +|.|++++++.. .+. ...-..+.+.+..+..+-..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~~~--~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRDVD--LVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSCHH--HHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCCHH--HHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCcccCcc
Confidence 4567778889999999998643 555566777777 999999998642 111 11234566666666555443
No 59
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=48.78 E-value=41 Score=28.52 Aligned_cols=114 Identities=17% Similarity=0.125 Sum_probs=73.9
Q ss_pred eEEEEEcCCC-chHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHH-cCCCCCcEEeecC-CChhHHHHHHcCC
Q 012658 205 GVAGQIIPWN-FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPTAGAALASHM 281 (459)
Q Consensus 205 GVv~~i~p~n-~P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~-aGlP~g~v~vv~g-~~~~~~~~L~~~~ 281 (459)
|.|+++..-+ =+-...+.+-...++.|..++--. -|+ +.|.+ .|+|-..++=++. .++++++.+.+ .
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~-g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTG----NLISRATGMNVNAMLSGPMGGDQQVGALISE-G 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHT-T
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHH----HHHHHHhCceeEEEEecCCCCCchHHHHHHC-C
Confidence 6555554433 344444555566777898877522 243 45555 7999776665543 34567766665 6
Q ss_pred CccEEEeeCC-------hHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCC
Q 012658 282 EVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (459)
Q Consensus 282 ~v~~v~ftGs-------~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~G 344 (459)
.|+.|.||-+ ...+..|.+.+.. ..+|+.-.+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999876 4577889988887 667775332 456677777777764
No 60
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=44.77 E-value=40 Score=28.06 Aligned_cols=62 Identities=11% Similarity=0.093 Sum_probs=44.7
Q ss_pred HHHHHHcCCCCCcEEeecCC-C----hhHHHHHHcCCCccEEEeeCCh-----HHHHHHHHHHHhcCCCceEEe
Q 012658 250 SKLLHEAGLPPGVLNIVSGY-G----PTAGAALASHMEVDKLAFTGST-----TTGKIVLQLAAKSNLKPVTLE 313 (459)
Q Consensus 250 ~~ll~~aGlP~g~v~vv~g~-~----~~~~~~L~~~~~v~~v~ftGs~-----~~g~~i~~~~a~~~~~pv~le 313 (459)
++.|.+.|+|-..|+-++.. . +++.+.+.. ..|+.|.+|-+. ..+..|.+.+-. ..+|++-.
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR~Av~-~~IP~~T~ 131 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRRTAVD-SGIPLLTN 131 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHHHHHH-TTCCEECS
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHHHHHH-hCCCeEcC
Confidence 45667899998877777653 3 567777765 589999998665 367788888877 66777644
No 61
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=41.35 E-value=42 Score=24.33 Aligned_cols=56 Identities=23% Similarity=0.269 Sum_probs=39.8
Q ss_pred cCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 230 aGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
.||-+|+|..|.. +..++.++.+.++|+ ++..+.|++ + .+...-+.+.++.+.+..
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDD-T------------Ilvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCC-E------------EEEEECCHHHHHHHHHHH
Confidence 6899999988654 788999999997775 999998842 2 244455555566665544
No 62
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=40.58 E-value=47 Score=24.65 Aligned_cols=36 Identities=33% Similarity=0.574 Sum_probs=30.1
Q ss_pred cCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCC
Q 012658 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (459)
Q Consensus 230 aGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 269 (459)
++|-+|+|..|. .+..++.++.+.++|+ ++..+.|+
T Consensus 20 ~~n~vVikT~PG---~A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPG---AAHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTT---CHHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhCCCCC-eEEEEecC
Confidence 799999998865 4788999999987775 89999884
No 63
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=36.76 E-value=35 Score=25.34 Aligned_cols=37 Identities=24% Similarity=0.469 Sum_probs=31.3
Q ss_pred cCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCC
Q 012658 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (459)
Q Consensus 230 aGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 269 (459)
.+|-+|+|..+. .+..++.++.+.+.+++++..+.|+
T Consensus 14 ~~n~vVikT~PG---~A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPG---AAQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTT---THHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCC---cHHHHHHHHHhcCCCCCeEEEEecC
Confidence 689999998865 4788889998887889999999884
No 64
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=35.63 E-value=41 Score=25.20 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=29.9
Q ss_pred cCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCC
Q 012658 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (459)
Q Consensus 230 aGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~ 269 (459)
.||-+|+|..+.. +..++.++.+.++|+ ++..+.|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999988654 788999999987775 89988884
No 65
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=33.18 E-value=1e+02 Score=21.29 Aligned_cols=47 Identities=17% Similarity=0.257 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHH
Q 012658 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALET 152 (459)
Q Consensus 100 ~~~~dv~~av~~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~ 152 (459)
.+.++.+..+.+.-.|...|+|... .+|+-+...|.+-++.++.-+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 4566777777777778888899764 5677888888888888776553
No 66
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=32.90 E-value=49 Score=28.80 Aligned_cols=114 Identities=18% Similarity=0.088 Sum_probs=74.9
Q ss_pred eEEEEEcCCCc-hHHhhHHHHHHHHhcCCeEEeecCCCchHHHHHHHHHHHH-cCCCCCcEEeecC-CChhHHHHHHcCC
Q 012658 205 GVAGQIIPWNF-PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPTAGAALASHM 281 (459)
Q Consensus 205 GVv~~i~p~n~-P~~~~~~~l~~ALaaGN~VVlKps~~~p~~~~~l~~ll~~-aGlP~g~v~vv~g-~~~~~~~~L~~~~ 281 (459)
|.|+++..-+- +-...+.+-...++.|..++- |.-|+ +.|.+ .|+|-..++=++. ..+++++.+.. .
T Consensus 28 g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I~~-g 97 (178)
T 1vmd_A 28 KRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQIGAMIAE-G 97 (178)
T ss_dssp CEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHT-T
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCchHHHHHHC-C
Confidence 76665554443 445555556667778998775 33444 45555 7999666654443 34567666665 6
Q ss_pred CccEEEeeCC-------hHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCC
Q 012658 282 EVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (459)
Q Consensus 282 ~v~~v~ftGs-------~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~G 344 (459)
.|+.|.||-+ ...+..|.+.+.. ..+|+.-.+ ..++.++.+.+++..
T Consensus 98 eIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 98 KIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp SCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred CccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999876 3457889988887 667775332 456778888877764
No 67
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=32.59 E-value=37 Score=27.88 Aligned_cols=44 Identities=18% Similarity=0.123 Sum_probs=32.0
Q ss_pred CcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHHHh
Q 012658 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (459)
Q Consensus 261 g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~a~ 304 (459)
|.+++++|+..+.-......+++.+|.+||+......+.+.+.+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~ 96 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE 96 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH
Confidence 57888878666544333332579999999998888888877765
No 68
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=29.18 E-value=37 Score=29.04 Aligned_cols=52 Identities=19% Similarity=0.277 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcC--CCccEEEeeCChHHHH
Q 012658 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 296 (459)
Q Consensus 244 ~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~--~~v~~v~ftGs~~~g~ 296 (459)
.....|+.++.+.|...-...+++.+ ..+.+.|.+. .+.|.|..||++..+.
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 36678889999999877677788776 6666666542 3589999999887543
No 69
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=28.78 E-value=2.1e+02 Score=22.49 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=68.9
Q ss_pred EEEeeCChHHHHHHHHHHHhcCCCceEEecCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccccCceeEeeCcchHHHH
Q 012658 285 KLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFV 364 (459)
Q Consensus 285 ~v~ftGs~~~g~~i~~~~a~~~~~pv~lelgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~~v~V~e~v~d~f~ 364 (459)
.++|...++.-+.|.+.... ...++ +++..|-|-..--+.+ .-|..+|- +.--|. + .++|.
T Consensus 5 fvvfssdpeilkeivreikr-qgvrv---------vllysdqdekrrrerl--eefekqgv-----dvrtve-d-kedfr 65 (162)
T 2l82_A 5 FVVFSSDPEILKEIVREIKR-QGVRV---------VLLYSDQDEKRRRERL--EEFEKQGV-----DVRTVE-D-KEDFR 65 (162)
T ss_dssp EEEEESCHHHHHHHHHHHHH-TTCEE---------EEEECCSCHHHHHHHH--HHHHTTTC-----EEEECC-S-HHHHH
T ss_pred EEEecCCHHHHHHHHHHHHh-CCeEE---------EEEecCchHHHHHHHH--HHHHHcCC-----ceeeec-c-HHHHH
Confidence 47888888888888888776 33444 4556676665544443 23556662 222232 2 47899
Q ss_pred HHHHHHHHhhccCCCCCCCCcccccCCHHHHHHHHHHHHHHHhCCCeEEe
Q 012658 365 EKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLET 414 (459)
Q Consensus 365 ~~l~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~i~~~i~~a~~~Ga~v~~ 414 (459)
+.+++-..++. ..+.--+++.+..+.+.++|++|++.|..+..
T Consensus 66 enireiweryp-------qldvvvivttddkewikdfieeakergvevfv 108 (162)
T 2l82_A 66 ENIREIWERYP-------QLDVVVIVTTDDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp HHHHHHHHHCT-------TCCEEEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhCC-------CCcEEEEEecCcHHHHHHHHHHHHhcCcEEEE
Confidence 99888777653 23334455666678999999999999988764
No 70
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=26.75 E-value=79 Score=26.56 Aligned_cols=56 Identities=23% Similarity=0.269 Sum_probs=40.1
Q ss_pred cCCeEEeecCCCchHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHHH
Q 012658 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (459)
Q Consensus 230 aGN~VVlKps~~~p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 302 (459)
.||-+|+|..|.. +..++.++...++|+ ++..+.|++ + .++.+-+...+..+.+..
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGDD-T------------Ilvi~r~~~~a~~l~~~l 145 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD-T------------CLIICRTPKDAKKVSNQL 145 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECSS-E------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC-E------------EEEEeCCHHHHHHHHHHH
Confidence 7999999988654 788999999998875 999998842 2 244445555566555544
No 71
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=26.23 E-value=28 Score=29.91 Aligned_cols=53 Identities=25% Similarity=0.234 Sum_probs=36.5
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHc---CCCccEEEeeCChHHH
Q 012658 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTG 295 (459)
Q Consensus 243 p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~---~~~v~~v~ftGs~~~g 295 (459)
-.....|++.|.+.|+..-...+++.+...+...|.+ ..+.|.|..||++..+
T Consensus 30 Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 30 DKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred cChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3566788999999998766666776644455555543 1268999999988644
No 72
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=25.23 E-value=92 Score=26.58 Aligned_cols=53 Identities=26% Similarity=0.117 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHH---cCCCccEEEeeCChHHH
Q 012658 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA---SHMEVDKLAFTGSTTTG 295 (459)
Q Consensus 243 p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~---~~~~v~~v~ftGs~~~g 295 (459)
-....+|++.|.+.|+.--...+|+.+...+..++. .....|.|..||+...+
T Consensus 39 D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred cchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 457788999999999876666667654444544443 34568999999998643
No 73
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=24.18 E-value=78 Score=25.42 Aligned_cols=80 Identities=5% Similarity=-0.001 Sum_probs=48.9
Q ss_pred HHHHHhhccCCCcccc--CceeEeeCcchHHHHHHHHHHHHhhccCCCCCCCCcc-------cccCCHHHHHHHHHHHHH
Q 012658 334 LAHYALFFNQGQCCCA--GSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQ-------GPQIDSEQFEKILKYIRS 404 (459)
Q Consensus 334 ~i~~~~~~~~GQ~C~a--~~~v~V~e~v~d~f~~~l~~~~~~~~vG~p~~~~~~~-------Gpl~~~~~~~~i~~~i~~ 404 (459)
..+.......+-.|.. ....|++.+.++++.+++.+.+..+---+|+.+|... .|-.+..-+ ..+|+.
T Consensus 36 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~~---~~ll~~ 112 (135)
T 2v9v_A 36 KLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARVY---QALLEE 112 (135)
T ss_dssp HHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHHH---HHHHHH
T ss_pred HHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHHH---HHHHHH
Confidence 3344444444434443 2344899999999999999999886445565555432 232344443 456777
Q ss_pred HHhCCCeEEeCC
Q 012658 405 GVDGGAKLETGG 416 (459)
Q Consensus 405 a~~~Ga~v~~gg 416 (459)
.+++|.-...|+
T Consensus 113 l~~~g~l~~~~~ 124 (135)
T 2v9v_A 113 WSREGRLQLAAN 124 (135)
T ss_dssp HHHTTSEEECSS
T ss_pred HHHCCCEEecCC
Confidence 788887665555
No 74
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=23.61 E-value=40 Score=29.55 Aligned_cols=54 Identities=26% Similarity=0.182 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEeecCCChhHHHHHHcC--CCccEEEeeCChHHHH
Q 012658 243 PLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 296 (459)
Q Consensus 243 p~~~~~l~~ll~~aGlP~g~v~vv~g~~~~~~~~L~~~--~~v~~v~ftGs~~~g~ 296 (459)
-.....|..++.+.|...-...+++.+...+...|.+. .+.|.|..||++..+.
T Consensus 48 Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 48 DHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred CcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 34677889999999987666777776545555555442 4689999999987543
No 75
>1g62_A Ribosome anti-association factor EIF6; alpha-beta barrel, velcro closure, subdomain, structural genomics, PSI; 2.50A {Saccharomyces cerevisiae} SCOP: d.126.1.1 PDB: 2x7n_B
Probab=22.75 E-value=3.3e+02 Score=24.44 Aligned_cols=145 Identities=17% Similarity=0.180 Sum_probs=88.7
Q ss_pred HHHHHhcCCeE-EeecCCCchHHHHHHHHHHHHcCCCCCc-EEeecCCChhHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 012658 224 VGPALACGNTI-VLKTAEQTPLSALYVSKLLHEAGLPPGV-LNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (459)
Q Consensus 224 l~~ALaaGN~V-VlKps~~~p~~~~~l~~ll~~aGlP~g~-v~vv~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 301 (459)
+...|.+||.= ++-|+..+..--. .+++. +|.++ ++.+++.-+.+|..+....++..|..--+.++-+.|...
T Consensus 58 lvG~l~~gN~nGllvp~~~~d~El~----~l~~~-l~~~v~V~~~~~~~~aiGn~i~~ND~~alV~p~l~~e~~~~i~d~ 132 (224)
T 1g62_A 58 IIGRMTAGNRRGLLVPTQTTDQELQ----HLRNS-LPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDV 132 (224)
T ss_dssp CHHHHCEECSSEEEEETTCCHHHHH----HHHHH-SCTTSEEEEECCCSSCHHHHEEECSSEEEECTTCCHHHHHHHHHH
T ss_pred eEEEEEEecCceEEcCCcCCHHHHH----HHHhh-CCCCceEEEECCcCcceeEEEEEcCcEEEECCCCCHHHHHHHHHh
Confidence 45677788764 5567766544433 34444 68775 888998888899999998889888887788888888776
Q ss_pred HHhcCCCceEEe-cCCcCcEEEccCCCHHHHHHHHHHHhhccCCCccc-cCceeEeeCcchHHHHHHHHHHHHhhcc--C
Q 012658 302 AAKSNLKPVTLE-LGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCC-AGSRTFVHESVYDQFVEKANALAMKRVV--G 377 (459)
Q Consensus 302 ~a~~~~~pv~le-lgG~~p~iV~~dADld~aa~~i~~~~~~~~GQ~C~-a~~~v~V~e~v~d~f~~~l~~~~~~~~v--G 377 (459)
+. .+++-- .+|.. ++ |-.|. +-+-.+||...-++-++.+.+.+. +.+ |
T Consensus 133 L~----VeV~~~tIag~~-lV----------------------Gs~~v~nn~G~LVhP~~s~ee~~~i~d~L~-V~v~~g 184 (224)
T 1g62_A 133 LG----VEVFRQTISGNI-LV----------------------GSYCSLSNQGGLVHPQTSVQDQEELSSLLQ-VPLVAG 184 (224)
T ss_dssp HT----SEEEECCBTTBS-CG----------------------GGSEEECSSCEEECTTCCHHHHHHHHHHHT-SCEEEC
T ss_pred hC----CcEEEEEecCcc-eE----------------------EEEEEEeCcEEEECCCCCHHHHHHHHHHhC-CcEEEE
Confidence 63 344332 23322 11 11111 124579999988888888766543 211 1
Q ss_pred -----CC--------CCCCCcccccCCHHHHHHHHHH
Q 012658 378 -----DP--------FKGGIQQGPQIDSEQFEKILKY 401 (459)
Q Consensus 378 -----~p--------~~~~~~~Gpl~~~~~~~~i~~~ 401 (459)
.+ .+.+.-.||-.+.....++++.
T Consensus 185 TvN~G~~~VGs~~vann~G~lvg~~TT~~El~~Ie~~ 221 (224)
T 1g62_A 185 TVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESI 221 (224)
T ss_dssp CBTTTBSCHHHHEEECSSCEEEETTCCHHHHHHHHHH
T ss_pred EEcCCCCceeEEEEEECCEEEECCCCCHHHHHHHHHH
Confidence 11 1234445666666666655443
No 76
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=20.07 E-value=82 Score=22.02 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=27.4
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHcHHHHH
Q 012658 111 AARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIA 148 (459)
Q Consensus 111 ~A~~A~~~g~W~~~~~~~R~~iL~~~a~~l~~~~~~l~ 148 (459)
.++.... .|..|+.++|..+.......-+++..++.
T Consensus 29 i~k~lg~--~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 29 KLKTVKE--NWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp HHHHHHH--HHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555 89999999999998888777777666654
Done!