BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012665
(458 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1
Length = 668
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 139/280 (49%), Gaps = 36/280 (12%)
Query: 123 IRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQ 182
++ +AT+IQ FRGY+ARK+ RALKG+V+LQ ++RG +V+RQ +K +Q +V +QSQ
Sbjct: 320 VQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQ 379
Query: 183 VCAKRCQKAGSWHCDENKQLQTLRDKII-KMDSSCQRRWDDSTLTKQEADAMFLSKKEAA 241
+ ++R + EN Q Q +D+ + WDDS LTK+E D+ K +A
Sbjct: 380 IQSRRIKML------EN-QAQVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAI 432
Query: 242 IRRERIKEYAFSHRKSADSEQNKVNGR--WRYWLEQWVDTQ-----VMKSKELEDLDSIW 294
I+RER YA+S + +S ++ + R ++W WVD Q S D
Sbjct: 433 IKRERSMAYAYSRKLWKNSPKSTQDNRSFPQWW--NWVDRQNPLASPAPSYSQPQRDFRL 490
Query: 295 TTANGNPREEYIGKGLRLKNLQTKYHID---------GLDSP--------VLFSRRSLHR 337
T + P + + + +++ H D +P +SR L
Sbjct: 491 TPSRLCP--SPLSQSSKQHHIRLDNHFDTSTPRSSRSTFHTPSRPIHTGTSRYSRGRLRG 548
Query: 338 KQNSLGDEKSFASSPVVPTYMAATESAKAKARSMSSPKIR 377
+ + D+ S S P P+YMA T SAKAK R S+PK R
Sbjct: 549 QDSPFKDDDSLTSCPPFPSYMAPTVSAKAKVRPNSNPKER 588
>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1
Length = 454
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 15/185 (8%)
Query: 125 QLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVC 184
+ AA IQS FRG+LAR+ + ++G +L+ L+ G V+RQA TLKC+Q++ +QSQ+
Sbjct: 108 EAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQIR 167
Query: 185 AKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMFLSKKEAAIRR 244
++R + + + LQ ++ + + W+ S +K++ +A L K EA +RR
Sbjct: 168 SRRIRMSEENQARHKQLLQKHAKELGGLKNGGN--WNYSNQSKEQVEAGMLHKYEATMRR 225
Query: 245 ERIKEYAFSHR---KSADSEQNKV-----NGRWRY-WLEQWVDTQVMKSKELEDLDSIWT 295
ER YAF+H+ KS N + N W + WLE+W+ + +S E E T
Sbjct: 226 ERALAYAFTHQQNLKSFSKTANPMFMDPSNPTWGWSWLERWMAGRPWESSEKEQN----T 281
Query: 296 TANGN 300
T N N
Sbjct: 282 TNNDN 286
>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
Length = 587
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 124 RQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQS 181
R++AAT +Q+ FRGYLAR+A ALKGI++LQALIRG VRRQA TL + IV +Q+
Sbjct: 112 REIAATSVQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQA 169
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 350 SSPVVPTYMAATESAKAKARSMSSPK 375
+SP +P+YM AT+SAKAK R SPK
Sbjct: 494 TSPSIPSYMQATKSAKAKLRLQGSPK 519
>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3
Length = 794
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%)
Query: 101 EEDSSIEIKLDVAQSPHQCEKEIRQLAATRIQSIFRGYLARKALRALKGIVKLQALIRGR 160
EE S ++ + +S + ++++ + IQ+ RG+LAR+ L K ++KLQA +RG
Sbjct: 191 EESESDDVIIVRKESDEKVDEKLDESVIVVIQAAVRGFLARRELLRSKKVIKLQAAVRGH 250
Query: 161 NVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGS 193
VR QA +L+C+Q+IV +Q+ V A+ K GS
Sbjct: 251 LVRSQAMGSLRCVQAIVKMQAMVRARHSTKDGS 283
>sp|Q9H0B3|K1683_HUMAN Uncharacterized protein KIAA1683 OS=Homo sapiens GN=KIAA1683 PE=2
SV=1
Length = 1180
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 118 QCEKEIRQLAATRIQSIFRGYLARKALRAL-KGIVKLQALIRGRNVRR 164
Q +EIR LA IQ+ RGYLAR+ +R +G + +QA RG VRR
Sbjct: 920 QAAEEIRILAVITIQAGVRGYLARRRIRLWHRGAMVIQATWRGYRVRR 967
>sp|Q6FSH0|BBP1_CANGA Spindle pole component BBP1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP1 PE=3
SV=1
Length = 453
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 28/132 (21%)
Query: 175 SIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADAMF 234
+I N++S++ + K N+++Q L +KI+K++S CQ + L +++ +
Sbjct: 342 TIYNLESEILEQGVSK--------NREIQNLNEKILKLESRCQ-ELEAEKLLERDKYELR 392
Query: 235 LSKKEAAIRRERI-------KEYAFSHRKSADSEQNKVNGRWRYWLEQWVDTQVMKSKEL 287
++ EA +R + I +Y++SHR S N +RY L + S+E+
Sbjct: 393 IASLEAKLREQNISNGKNYFSDYSYSHRSREFSPDN-----YRY-LNNYF------SEEM 440
Query: 288 EDLDSIWTTANG 299
D D+ NG
Sbjct: 441 SDFDADIPYKNG 452
>sp|Q9FY74|CMTA1_ARATH Calmodulin-binding transcription activator 1 OS=Arabidopsis
thaliana GN=CMTA1 PE=2 SV=2
Length = 1007
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 68 VAIASAIKAAHVAAEVVRLTGTPQSTNGCERQVEEDSSIEIKLDVAQS--------PHQC 119
A+ +A +AA +V R+ Q C+ + +D I+I +A S P Q
Sbjct: 761 TAVRNATQAADRLHQVFRMQSF-QRKQLCD--IGDDEKIDISDQLAVSFAASKTKNPGQG 817
Query: 120 EKEIRQLAATRIQSIFRGYLARKALRALKG-IVKLQALIRGRNVRRQAFTTL 170
+ + AAT IQ +RG+ RK ++ IVK+QA +RG VR+Q T +
Sbjct: 818 DVSL-SCAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQYRTVI 868
>sp|Q875X3|MYO2A_NAUCC Myosin-2A OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 /
NBRC 1992 / NRRL Y-12630) GN=MYO2A PE=3 SV=2
Length = 1567
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 12/115 (10%)
Query: 119 CEKEIRQLAATRIQSIFRGYLARKALRA-LKGIVKLQALIRGRNVRRQAFTTLKCLQSIV 177
E E+ Q AAT IQ+++RGY R + + IVKLQ+ IR +R+ + + + +
Sbjct: 832 VEYELEQHAATLIQTMYRGYSKRSYISGVISSIVKLQSRIREELEQREMQSKYES-NAAI 890
Query: 178 NIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMDSSCQRRWDDSTLTKQEADA 232
+IQS++ A +KA E+K+ RD I+ + S +RR K +ADA
Sbjct: 891 SIQSRIRAFVPRKAY-----ESKR----RDTIV-VQSLIRRRIAQRDFKKLKADA 935
>sp|Q8GSA7|CMTA3_ARATH Calmodulin-binding transcription activator 3 OS=Arabidopsis
thaliana GN=CMTA3 PE=1 SV=1
Length = 1032
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 125 QLAATRIQSIFRGYLARK-ALRALKGIVKLQALIRGRNVRR 164
Q AA RIQ+ FRGY RK L + I+K+QA +RG R+
Sbjct: 853 QAAAIRIQNKFRGYKGRKDYLITRQRIIKIQAHVRGYQFRK 893
>sp|P62285|ASPM_BOVIN Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Bos taurus GN=ASPM PE=2 SV=1
Length = 3371
Score = 35.4 bits (80), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 100 VEEDSSIEIKLDVAQSPH-----QCEKEIRQLAATRIQSIFRGYLARKALRA-LKGIVKL 153
V+ S + +KL Q H Q +E R+ + ++Q+ RGYL RK +R K V L
Sbjct: 1615 VKLQSIVRMKLARKQYLHLRAIAQQREEHRRASCIKLQAFLRGYLVRKQVRLQRKAAVSL 1674
Query: 154 QALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRCQKAGSWHCDENKQLQTLRDKIIKMD 213
Q+ R R +R LK + V IQ R +AG+ + K +R + +
Sbjct: 1675 QSYFRMRKMR---LDYLKVCHAAVVIQRYY---RAHRAGA---QQRKHFLQVRRAVTYLQ 1725
Query: 214 SSCQRRWDDSTLTKQEADAMFLSKKEAAIR--RERIK 248
++ + L +Q A A+ K +AA R R+R K
Sbjct: 1726 ATYRGYKVRRQLQQQSAAAL---KIQAAFRGYRQRTK 1759
>sp|Q8CJ27|ASPM_MOUSE Abnormal spindle-like microcephaly-associated protein homolog OS=Mus
musculus GN=Aspm PE=2 SV=2
Length = 3122
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 130 RIQSIFRGYLARKALRA-LKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAKRC 188
++QS FRG L RK LR K + LQ+ R R R++ LK ++ + IQS CA R
Sbjct: 1702 KLQSHFRGCLVRKQLRLQCKAAISLQSYFRMRTARQR---YLKMCKAALVIQSFYCAYRA 1758
Query: 189 Q 189
Q
Sbjct: 1759 Q 1759
>sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4 OS=Arabidopsis
thaliana GN=CMTA4 PE=1 SV=1
Length = 1016
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 127 AATRIQSIFRGYLARKALRALK-GIVKLQALIRGRNVRR 164
AA IQ FRGY RK L+ +VK+QA +RG +R+
Sbjct: 858 AALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRK 896
>sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2 OS=Arabidopsis
thaliana GN=CMTA2 PE=1 SV=1
Length = 1050
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 127 AATRIQSIFRGYLARKALRALKG-IVKLQALIRGRNVRRQ 165
AA +IQ +RG+ RK ++ IVK+QA +RG VR+Q
Sbjct: 873 AAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQ 912
>sp|Q47I19|FLGI_DECAR Flagellar P-ring protein OS=Dechloromonas aromatica (strain RCB)
GN=flgI PE=3 SV=1
Length = 364
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 10/137 (7%)
Query: 12 RRLFISDPEKEKRKRCIFGRLRIKSFASIAAATPLPSNDRTAVIEAEEEQNKHAVSVAIA 71
RR+ + PE + GR+ +A + N RT + ++ A +V
Sbjct: 231 RRMVVKVPEDADSRVSFLGRIENLDVQPVAGVAKVVINPRTGSVVMNQKVTLDACAV--- 287
Query: 72 SAIKAAHVAAEVVRLTGTPQSTNGCERQVEEDSSIEIKLDVAQSPHQCEKEIRQLAATRI 131
AH + VV G PQ + QV++D+ + + + K + L A +
Sbjct: 288 -----AHGSLSVVVDAGQPQFGQAADIQVKQDNGSLMNVKAGANLADVVKALNALGANPL 342
Query: 132 Q--SIFRGYLARKALRA 146
+I + A ALRA
Sbjct: 343 DLLAILQAMKAAGALRA 359
>sp|P62297|ASPM_SHEEP Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Ovis aries GN=ASPM PE=2 SV=1
Length = 3374
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 127 AATRIQSIFRGYLAR-KALRALKGIVKLQALIRGRNVRRQ 165
A +IQS +R Y +R K LR K VKLQ+++R + R+Q
Sbjct: 1593 AVVKIQSYYRAYASRRKFLRLKKATVKLQSIVRMKQARKQ 1632
Score = 32.3 bits (72), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 130 RIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSI 176
+IQ+++R + ARK LR +K ++QA R R R++ L+ ++ I
Sbjct: 2856 KIQAVWRRHKARKYLREVKAACRIQAWYRCRKARKEYLAVLRAVRII 2902
>sp|Q91WD7|KI18A_MOUSE Kinesin-like protein KIF18A OS=Mus musculus GN=Kif18a PE=2 SV=1
Length = 886
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 327 PVLFSRRSLHR-KQNSLGDEKSFASSPVVPTYMAATESAKAKARSMSS 373
P+ S+ S+HR + +S + S S VP+YMA T +AK K + MSS
Sbjct: 777 PLASSKSSVHRIESSSFSTKDSMPESAGVPSYMAMTTAAKRKWKQMSS 824
>sp|Q9QY06|MYO9B_MOUSE Unconventional myosin-IXb OS=Mus musculus GN=Myo9b PE=1 SV=2
Length = 2114
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 127 AATRIQSIFRGYLARKALRALKGIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCAK 186
AA IQ+ +R Y R+AL + V LQA RG ++RQA+ + SI+ +QS +C
Sbjct: 982 AALTIQACWRSYRVRRALERTQAAVYLQAAWRGY-LQRQAYHHQR--HSIIRLQS-LCRG 1037
Query: 187 RCQK 190
Q+
Sbjct: 1038 HLQR 1041
>sp|P62283|ASPM_AOTVO Abnormal spindle-like microcephaly-associated protein homolog
OS=Aotus vociferans GN=ASPM PE=2 SV=1
Length = 3473
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 127 AATRIQSIFRGYLARKALRALK-GIVKLQALIRGRNVRRQAFTTLKCLQSIVNIQSQVCA 185
+ +IQS +R Y+++K +LK VKLQ++++ + R+Q L +++ IQ
Sbjct: 1654 SVIKIQSYYRAYVSKKEFLSLKNATVKLQSIVKMKQTRKQ---YLHLRATVLFIQ----- 1705
Query: 186 KRCQKAGSWHCDENKQLQTLRDKIIKMDS 214
RC ++ + ++ +R+ IK+ +
Sbjct: 1706 -RCYRSKKLAAQKREEYMQMRESCIKLQA 1733
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus
musculus GN=Baz2a PE=1 SV=2
Length = 1889
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 356 TYMAATESAKAKARSMSSPKIRPGTFDSYSESYSPCKKKLSLMSSLTSEVPSYSNIGRPS 415
+ A+ E + A + SSP + P F + S + SP +SL +S+T+ V S PS
Sbjct: 434 SLTASAEISPAVSPVASSP-VPPEVFVAVSPASSPALPAISLEASMTTPVTSPQGSPEPS 492
Query: 416 ---AYQQRSPSLKNV 427
A+Q SP+ KNV
Sbjct: 493 PAAAFQTVSPARKNV 507
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.127 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,849,430
Number of Sequences: 539616
Number of extensions: 6102393
Number of successful extensions: 17875
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 17697
Number of HSP's gapped (non-prelim): 229
length of query: 458
length of database: 191,569,459
effective HSP length: 121
effective length of query: 337
effective length of database: 126,275,923
effective search space: 42554986051
effective search space used: 42554986051
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)