Query 012667
Match_columns 458
No_of_seqs 172 out of 1215
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 05:03:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012667.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012667hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0154 GatA Asp-tRNAAsn/Glu-t 100.0 7E-105 2E-109 798.3 44.0 439 1-448 25-474 (475)
2 PRK06169 putative amidase; Pro 100.0 6E-103 1E-107 793.0 47.2 439 1-449 25-464 (466)
3 PRK09201 amidase; Provisional 100.0 1E-101 3E-106 782.1 46.3 439 1-450 25-464 (465)
4 PRK07042 amidase; Provisional 100.0 4E-101 1E-105 779.0 47.3 436 1-451 25-462 (464)
5 TIGR02715 amido_AtzE amidohydr 100.0 3E-101 7E-106 777.4 45.9 430 1-441 18-448 (452)
6 PRK06102 hypothetical protein; 100.0 4E-101 9E-106 776.1 46.1 421 1-442 24-450 (452)
7 PRK07486 amidase; Provisional 100.0 6E-101 1E-105 782.1 47.3 443 1-449 30-479 (484)
8 PRK07487 amidase; Provisional 100.0 9E-101 2E-105 777.2 47.4 427 1-443 26-459 (469)
9 PRK05962 amidase; Validated 100.0 2E-100 4E-105 765.5 45.7 417 3-442 1-422 (424)
10 PRK06170 amidase; Provisional 100.0 4E-100 9E-105 777.6 47.0 439 1-449 30-489 (490)
11 PRK06061 amidase; Provisional 100.0 7E-100 1E-104 772.4 47.7 438 1-452 36-479 (483)
12 PRK07056 amidase; Provisional 100.0 5E-100 1E-104 768.3 45.7 420 1-442 24-452 (454)
13 PRK00012 gatA aspartyl/glutamy 100.0 9E-100 2E-104 769.9 43.9 426 1-438 10-459 (459)
14 TIGR00132 gatA glutamyl-tRNA(G 100.0 1.2E-99 3E-104 769.1 43.9 424 1-440 14-460 (460)
15 PRK12470 amidase; Provisional 100.0 3.4E-99 7E-104 763.3 44.8 430 1-449 27-460 (462)
16 PRK07488 indole acetimide hydr 100.0 7.8E-99 2E-103 764.2 47.2 425 1-448 29-471 (472)
17 PRK08137 amidase; Provisional 100.0 5.8E-99 1E-103 769.8 45.7 433 1-449 24-490 (497)
18 PRK08186 allophanate hydrolase 100.0 1.1E-96 2E-101 759.9 45.1 423 1-444 25-451 (600)
19 PRK06529 amidase; Provisional 100.0 1.8E-96 4E-101 748.8 45.5 426 1-440 22-477 (482)
20 PF01425 Amidase: Amidase; In 100.0 1.2E-98 3E-103 764.8 27.8 425 1-431 1-441 (441)
21 PRK07235 amidase; Provisional 100.0 6.7E-97 1E-101 750.5 40.3 431 1-441 42-501 (502)
22 PRK07869 amidase; Provisional 100.0 4.7E-96 1E-100 743.8 43.3 420 1-443 33-464 (468)
23 PRK06828 amidase; Provisional 100.0 1.2E-94 2.7E-99 730.2 44.9 416 1-449 31-489 (491)
24 TIGR02713 allophanate_hyd allo 100.0 4.1E-94 9E-99 733.4 44.3 408 21-443 2-413 (561)
25 PRK11910 amidase; Provisional 100.0 7E-92 1.5E-96 710.7 44.4 401 1-448 183-612 (615)
26 PRK06707 amidase; Provisional 100.0 1.6E-91 3.6E-96 710.7 45.1 413 1-449 89-535 (536)
27 PRK07139 amidase; Provisional 100.0 7.6E-91 1.7E-95 697.4 42.9 403 3-442 8-434 (439)
28 PRK08310 amidase; Provisional 100.0 6E-91 1.3E-95 690.4 40.7 387 18-441 5-394 (395)
29 PLN02722 indole-3-acetamide am 100.0 9.6E-91 2.1E-95 690.9 38.8 387 17-439 4-420 (422)
30 PRK06565 amidase; Validated 100.0 1.7E-88 3.7E-93 681.3 38.8 443 1-449 25-561 (566)
31 KOG1211 Amidases [Translation, 100.0 1.4E-81 3E-86 612.5 25.1 427 2-439 37-493 (506)
32 KOG1212 Amidases [Translation, 100.0 1.1E-76 2.3E-81 583.4 31.6 430 1-449 73-558 (560)
33 TIGR03847 conserved hypothetic 36.1 58 0.0012 28.2 4.0 35 22-56 132-166 (177)
34 PF11290 DUF3090: Protein of u 34.1 63 0.0014 27.9 4.0 35 22-56 130-164 (171)
35 PF14359 DUF4406: Domain of un 31.6 88 0.0019 24.1 4.1 24 253-277 10-33 (92)
36 cd00363 PFK Phosphofructokinas 27.4 1.5E+02 0.0032 29.0 6.0 80 3-94 81-160 (338)
37 PF12965 DUF3854: Domain of un 24.2 2.1E+02 0.0045 23.6 5.4 43 239-282 69-111 (130)
38 PLN03028 pyrophosphate--fructo 22.9 2.1E+02 0.0045 30.5 6.3 81 3-94 162-243 (610)
39 COG3603 Uncharacterized conser 21.9 64 0.0014 26.0 1.8 18 259-277 110-127 (128)
40 KOG0848 Transcription factor C 21.4 1E+02 0.0023 28.6 3.3 62 82-145 47-108 (317)
41 TIGR02477 PFKA_PPi diphosphate 21.1 2.5E+02 0.0054 29.5 6.4 79 3-92 150-229 (539)
42 PF07849 DUF1641: Protein of u 20.4 1.4E+02 0.0031 19.1 2.9 20 253-273 21-40 (42)
No 1
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.3e-105 Score=798.30 Aligned_cols=439 Identities=35% Similarity=0.546 Sum_probs=376.2
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHH--HHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCcccccc
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILK--QATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK 78 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~--~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~ 78 (458)
|+++++++||++.| +.+|+|+.+++|.+++ +|+++|+++++|+..|||+||||+|||||+|+|++||+||+.+.+
T Consensus 25 e~~~~~l~ri~~~~---~~~na~~~~~~e~a~~~~~A~~~d~~~~~g~~~gpL~GvPiavKDn~~~~G~~Tt~gS~~l~~ 101 (475)
T COG0154 25 ELVEAYLARIEALN---PDLNAFVAVDPEAALALAEAAAADARLAAGEPLGPLAGVPIAVKDNIDTAGLPTTAGSKALED 101 (475)
T ss_pred HHHHHHHHHHHHhC---CCCCEEEEeChhhcchHHHHHHHHHHHhcCCCCCCcCCceEEEeeccccCCCccCccChhhcc
Confidence 68999999999998 8899999999998866 999999999999889999999999999999999999999999988
Q ss_pred CCCCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCC
Q 012667 79 VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGG 158 (458)
Q Consensus 79 ~~~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gG 158 (458)
+.+ ++||++|+||+++|||++||||||||+|+.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||
T Consensus 102 ~~p-~~DA~vV~rL~~aGaviiGKTNm~Efa~g~~~~~s~~G~t~NP~~~~~~pGGSSgGSAaAVAag~~~~alGSDtGG 180 (475)
T COG0154 102 YVP-PYDATVVERLRAAGAVILGKTNMDEFAMGSSTENSAFGPTRNPWNLERVPGGSSGGSAAAVAAGLVPLALGSDTGG 180 (475)
T ss_pred CCC-CcCcHHHHHHHHCCCEEEeecCCchhhcCCCCCCCCCCCCCCCCCCCCCCCcCchHHHHHHHhCCcchhcccCCCC
Confidence 755 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCC
Q 012667 159 SVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSI 238 (458)
Q Consensus 159 SiR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~ 238 (458)
|||+||+||||||||||+||||++|++|+++++|++|||||||+|+++++++|.|+|+.|... ..+ ...+.......+
T Consensus 181 SIR~PAa~cGvvGlKPT~Grvsr~g~~~~a~sld~~GplartV~D~a~l~~v~~g~D~~d~~~-~~~-~~~~~~~~~~~~ 258 (475)
T COG0154 181 SIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLDQIGPLARTVRDAALLLDVIAGPDPRDSPL-PPP-PPVPPALAGKDL 258 (475)
T ss_pred chhhhhhhhCceeeCCCCCccCCCCCccccCCcCccCcccCCHHHHHHHHHHHcCCCCccccc-ccc-cCccchhhccCC
Confidence 999999999999999999999999999999999999999999999999999999998887411 111 111111124568
Q ss_pred CCeEEEEeCCCCcC--CCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHH-HH-HHHH-HHHHHHHHHHHHHH-HHhcCC
Q 012667 239 SAIKLAKYDAWFND--CSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEV-MR-LAHY-LTIGSECSTSLSSY-LQKINC 312 (458)
Q Consensus 239 ~~lrIgv~~~~~~~--~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~-~~-~~~~-~~~~~e~~~~~~~~-~~~~~~ 312 (458)
+++|||++.++... .++++.++++++++.|+++ |++|+++++|.+.. .. ..++ .....+.+...... +...+.
T Consensus 259 ~~lrigv~~~~~~~~~~~~~v~~~~~~a~~~l~~~-Ga~v~~v~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (475)
T COG0154 259 KGLRIGVPKELGGGGPLDPDVRAAFEAAVKALEAA-GAEVVEVSLPLLSDDYALAAYYLARFDGERYGLRAADLYGKTRA 337 (475)
T ss_pred CCcEEEEECcccccCCCcHHHHHHHHHHHHHHHHC-CCEEEeccCCchhhhhhhhHHHHHHhhhhhhhhcchhhhhhhhh
Confidence 88999999988653 7889999999999999998 99999999995443 22 2231 12222333222211 222245
Q ss_pred CCCCHHHHHHHHhccCCCHHHHHHHHHHHHHH---HHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhh
Q 012667 313 SDQGWDARVALSVYGSFSSQEYIKAQKIRNHQ---MQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALV 389 (458)
Q Consensus 313 ~~~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~---~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~ 389 (458)
..++++++.++..+..++..+|.++...|.+. ++.+.++|+++|+||+||+|.++|++++ ......+......+.
T Consensus 338 ~~~~~~v~~ri~~G~~~~~~~~~~a~~~~~~~~~i~~~~~~~f~~~D~ll~Pt~~~~a~~ig~--~~~~~~~~~~~~~~~ 415 (475)
T COG0154 338 EGFGPEVKRRIMLGTYLLSAGYYDAYYRRAQKTLIRRAFDKLFEEVDVLLTPTTPTPAPKIGE--SESDGDDPLEMYLLD 415 (475)
T ss_pred hcccHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCEEEeCCCCCCCccccc--ccccccCHHHHhhhc
Confidence 67899999999999999999999998888554 8999999999999999999999999986 111111222333334
Q ss_pred cccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCC
Q 012667 390 RYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKP 448 (458)
Q Consensus 390 ~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p 448 (458)
.||.++|++|+|+||||+|++.+|||+||||+|++|+|..||++|++||++.++..++|
T Consensus 416 ~~t~~~Nl~G~PaisvP~g~~~~GlPvGlqlig~~~~d~~LL~~a~~~E~~~~~~~~~~ 474 (475)
T COG0154 416 VFTVPANLAGLPAISVPAGFTADGLPVGLQLIGPAFDDATLLRLAAALEQALGWHRRPP 474 (475)
T ss_pred cccccccccCCCeEEeccCCCCCCCCeeEEEecCCCCHHHHHHHHHHHHHhhCCCCCCC
Confidence 68999999999999999999888999999999999999999999999999998866555
No 2
>PRK06169 putative amidase; Provisional
Probab=100.00 E-value=6e-103 Score=793.04 Aligned_cols=439 Identities=29% Similarity=0.429 Sum_probs=379.9
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| +.+|||+++++|+|+++|+++|+++++|+.+||||||||+|||+|||+|++||+||..+.++.
T Consensus 25 ev~~~~l~ri~~~~---~~lna~~~~~~~~al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~ 101 (466)
T PRK06169 25 EATQAVLDRIDRRD---PAVNAFCLVDAEGALAAARASEERWRRGEPCGLLDGVPVSIKDIFLTRGWPTLRGSRAIDADG 101 (466)
T ss_pred HHHHHHHHHHHHhC---CCCCEEEEeCHHHHHHHHHHHHHHHhcCCCCCCcCCceEEEecccccCCcccCccChhhccCC
Confidence 68999999999998 889999999999999999999999999999999999999999999999999999998877666
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++.+|+++|++||++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 102 p~~~da~vV~~Lr~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSi 181 (466)
T PRK06169 102 PWDVDAPAVARLREAGAVLLGKTTTPEFGWKGVTDSPLYGITRNPWDTRLTAGGSSGGAAAAVALGMGPLSVGTDGGGSV 181 (466)
T ss_pred CCCCCHHHHHHHHHCCCEEEEecCchHhhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceeeecCCCCcc
Confidence 66799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISA 240 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~ 240 (458)
|+|||||||||||||+|++|+.|+.+++ ++|++|||||||+|+++++++|.++|+.|+.+...+..++.. .....+++
T Consensus 182 RiPAa~cGv~G~KPT~G~vs~~g~~~~~-~~d~~Gp~arsv~D~~~~~~~l~g~~~~d~~~~~~~~~~~~~-~~~~~~~~ 259 (466)
T PRK06169 182 RIPASFCGTFGFKPTFGRVPLYPASPFG-TLAHVGPMTRTVADAALLLDVIARPDARDWSALPPPTTSFLD-ALDRDVRG 259 (466)
T ss_pred hhchHhhCceeecCCCCccCCCCCCCCc-cccccCCeeCCHHHHHHHHHHhcCCCCCCCcccCCCCcchhh-hhccCCCC
Confidence 9999999999999999999999998886 999999999999999999999999887776544322212211 11234688
Q ss_pred eEEEEeCCCC-cCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHH
Q 012667 241 IKLAKYDAWF-NDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDA 319 (458)
Q Consensus 241 lrIgv~~~~~-~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 319 (458)
+||||..+++ ..++++++++++++++.|+++ |++|++++++ +......+..++..+....+..+... ..+.+.+.+
T Consensus 260 lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 336 (466)
T PRK06169 260 LRIAYSPTLGYVDVDPEVAALVAQAVQRLAAL-GARVEEVDPG-FSDPVEAFHVLWFAGAARLLRALPPG-QRALLDPGL 336 (466)
T ss_pred CEEEEECCcCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEeCCC-cchHHHHHHHHHHHHHHHHHHHhhhc-chhhcCHHH
Confidence 9999997765 348999999999999999998 9999999866 33333344444555555544444332 345689999
Q ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhcccccccccC
Q 012667 320 RVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIAGNFLG 399 (458)
Q Consensus 320 ~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~g 399 (458)
+.+++.+..++..+|.++++.|+++++.|+++|+++|+||+||+|.++|+++.... ..........+..||.+||++|
T Consensus 337 ~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~ap~~~~~~~--~~~~~~~~~~~~~~t~~~nl~G 414 (466)
T PRK06169 337 RRIAERGATYSASDYLDATAVRAALGARMGAFHERYDLLLTPTLPIPAFEAGHDVP--PGSGLTDWTQWTPFTYPFNLTQ 414 (466)
T ss_pred HHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCCCccCC--CccchhhhhhhhcccccccccC
Confidence 99999999999999999999999999999999999999999999999998865211 1111111223446899999999
Q ss_pred CCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCCc
Q 012667 400 LPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKPK 449 (458)
Q Consensus 400 ~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p~ 449 (458)
+|+++||+|++.+|||+||||+|++++|+.||++|++||+.++|..+.|+
T Consensus 415 ~PaisvP~g~~~~GlPvGlQlvg~~~~d~~lL~~a~~le~~~~~~~~~p~ 464 (466)
T PRK06169 415 QPAASVPCGFTAAGLPVGLQIVGPRHSDDLVLRVARAYEQALPWPHGAPA 464 (466)
T ss_pred CCeEEEecCcCCCCCceEEEEecCCCcHHHHHHHHHHHHhhcCcccCCCC
Confidence 99999999998899999999999999999999999999999988777665
No 3
>PRK09201 amidase; Provisional
Probab=100.00 E-value=1.4e-101 Score=782.06 Aligned_cols=439 Identities=32% Similarity=0.501 Sum_probs=374.3
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| +.+|||+++++|+|+++|+++|+++++|+++||||||||+|||+|||+|++||+||..+.++.
T Consensus 25 ev~~~~l~ri~~~~---~~lna~~~~~~d~al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~ 101 (465)
T PRK09201 25 AVAQATLARIARAN---PQLNAFTAVTAERALAEAARIDAARAAGEPLGPLAGVPFAVKNLFDVAGLTTLAGSKINRDRP 101 (465)
T ss_pred HHHHHHHHHHHHhC---CCceEEEEcCHHHHHHHHHHHHHHHHcCCCCCCcCCceEEEEeccccCCcccCcCChhhccCC
Confidence 68999999999998 889999999999999999999999999999999999999999999999999999999877665
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++++|+++|++||++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 102 ~~~~dA~vV~~Lr~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAaG~~~~alGtDtgGSI 181 (465)
T PRK09201 102 PATRDATAVRRLEAAGAVLVGALNMDEYAYGFTTENSHYGATRNPHDLTRIAGGSSGGSAAAVAAGLVPFTLGSDTNGSI 181 (465)
T ss_pred CCCCChHHHHHHHHCCCEEEEecChHHHhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHHHHHHcCCCceEEecCCCCcc
Confidence 54689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISA 240 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~ 240 (458)
|+||+||||||||||+||+|+.|++|+++++|++|||||||+|+++++++|.++|+.|+.+...|...+... .....++
T Consensus 182 RiPAa~cGv~G~KPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~~l~g~d~~d~~~~~~~~~~~~~~-~~~~~~~ 260 (465)
T PRK09201 182 RVPASLCGIFGLKPTYGRLSRAGSFPFVASLDHIGPFARSVADLALVYDVLQGPDPQDPFQADRPAEPTAPL-LDRGAEG 260 (465)
T ss_pred hhhhHHhCceeeeCCCCccCCCCCCCcccccCcccCccCCHHHHHHHHHHhcCCCCCCcccccCCCcchhhh-hccCCCC
Confidence 999999999999999999999999999999999999999999999999999998877765433221111000 1234678
Q ss_pred eEEEEeCCCCcC-CCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHH
Q 012667 241 IKLAKYDAWFND-CSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDA 319 (458)
Q Consensus 241 lrIgv~~~~~~~-~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 319 (458)
+||||..+++.. ++++++++++++++.|+.. + +++++........++.+...|....+..++.. ..+.+.+.+
T Consensus 261 lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~---~--~v~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~ 334 (465)
T PRK09201 261 LRIAVLGGYFAQWADPEARAAVDRVAKALGAT---R--EVELPEAARARAAAFIITASEGGNLHLPALRT-RPQDFDPAS 334 (465)
T ss_pred CEEEEECccccCCCCHHHHHHHHHHHHHccCc---e--eecCCchhHHHHHHHHHHHHHHHHHHHHHHhh-hhhhcCHHH
Confidence 999999877643 8999999999999988432 2 34456554444445556677877777666654 446789999
Q ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhcccccccccC
Q 012667 320 RVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIAGNFLG 399 (458)
Q Consensus 320 ~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~g 399 (458)
+.++..+..++..+|.++++.|+.+++.|.++|+++|+||+||++.++|++++........+......+..||.+||++|
T Consensus 335 ~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G 414 (465)
T PRK09201 335 RDRLLAGAMLPAAWYVQAQRFRRWFRQAVLELFEHVDVLIAPATPCSAPLIGQETMRIDGVELPVRANLGILTQPISFIG 414 (465)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCcccccccccCcchhhhhhhHHHhCccccccC
Confidence 99999998899999999999999999999999999999999999999999865221111111111223446899999999
Q ss_pred CCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCCch
Q 012667 400 LPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKPKV 450 (458)
Q Consensus 400 ~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p~~ 450 (458)
+|+++||+|.. +|||+||||||++++|+.||++|++||+.-......|.+
T Consensus 415 ~PaisvP~g~~-~GlPvGlQivg~~~~D~~lL~~A~~le~~~~~~~~~~~~ 464 (465)
T PRK09201 415 LPVVAVPLRTP-GGLPIGVQLIAAPWREDLALRAAAALEQQGVAAAPVPTV 464 (465)
T ss_pred CCeEEEeCCCC-CCcCeEEEEECCCCCHHHHHHHHHHHHhhCcccCcCCcc
Confidence 99999999964 699999999999999999999999999986544444443
No 4
>PRK07042 amidase; Provisional
Probab=100.00 E-value=4.5e-101 Score=778.99 Aligned_cols=436 Identities=25% Similarity=0.346 Sum_probs=371.5
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| +.+|||+++++|+|+++|+++|+++++|+.+||||||||+|||+|||+|++||+||..+.+.
T Consensus 25 el~~~~l~ri~~~~---~~lna~~~~~~d~al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~- 100 (464)
T PRK07042 25 EVTEAVLAHIARWE---PHLNALYAFDPEAARAAARASTARWAKGEPLGPLDGVPVTIKENIATRGVPVPLGTAATDLP- 100 (464)
T ss_pred HHHHHHHHHHHHHC---CCccEEEEcCHHHHHHHHHHHHHHHHcCCCCCCcCCCEEEEEcccccCCcccCCCChhhcCC-
Confidence 68999999999998 88999999999999999999999999999999999999999999999999999999877554
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++++||++|++|+++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 101 ~~~~dA~vV~~Lr~aGAiilGKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSI 180 (464)
T PRK07042 101 PAAADAPPAARLREAGAVILAKTTMPDYGMLSSGLSSFHGLTRNPWDLDQNPGGSSAGAGAAAAAGYGPLHLGTDIGGSV 180 (464)
T ss_pred CCCcchHHHHHHHHCCCEEEEecCchHhhcCCCCCCCCCCCcCCCCCCCCCCCCChHHHHHHHHcCCCceeeecCCCCcc
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISA 240 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~ 240 (458)
|+||+||||||||||+||+|..|.+ +.|++|||||||+|+++++++|.++|+.|+.+...+..+ +......+++
T Consensus 181 RiPAa~cGvvG~KPT~Grv~~~g~~----~~d~~Gp~arsv~D~a~~l~vl~g~d~~d~~~~~~~~~~--~~~~~~~~~~ 254 (464)
T PRK07042 181 RLPAGWCGIVGLKPSLGRIPIDPPY----TGRCAGPMTRTVDDAALLMSVLSRPDARDGTSLPPQDID--WSDLDIDVRG 254 (464)
T ss_pred ccchHhhCceeecCCCCccCCCCCc----cccccCCccCCHHHHHHHHHHhcCCCCCCccccCCCCcC--hhhhccCcCC
Confidence 9999999999999999999998853 358999999999999999999999988776543221111 1111234678
Q ss_pred eEEEEeCCCCc--CCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHH
Q 012667 241 IKLAKYDAWFN--DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWD 318 (458)
Q Consensus 241 lrIgv~~~~~~--~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 318 (458)
+||||+.+++. .++++++++++++++.|+++ |++|++++++........+..++..+....+..+.+. ..+.+.+.
T Consensus 255 lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 332 (464)
T PRK07042 255 LRIGLMLDAGCGLAVDPEVRAAVEAAARRFEAA-GAIVEPVPPFLTRAMLDGLDRFWRARLWSDLAALPPE-RRAKVLPY 332 (464)
T ss_pred CEEEEECcccCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEeCCchhHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhcCHH
Confidence 99999977543 38999999999999999998 9999999865433333322223334444444444433 34568899
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhccccccccc
Q 012667 319 ARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIAGNFL 398 (458)
Q Consensus 319 ~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~ 398 (458)
++.++..+..++..+|.++++.|+++++.+.++|+++|+||+||+|.++|+++......... .....+.||.+||++
T Consensus 333 ~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~---~~~~~~~~t~~~nl~ 409 (464)
T PRK07042 333 IRRWAEGGADLSGVEAVRGFNQTFAMRAAAARLFAEFDYVLSPVAPVPAFPAEWASPTNDPA---RPFEHIAFTVPWNMS 409 (464)
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCCcccccccccch---hhhcccccccceecc
Confidence 99999989999999999999999999999999999999999999999999886421100110 111234589999999
Q ss_pred CCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCCchh
Q 012667 399 GLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKPKVF 451 (458)
Q Consensus 399 g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p~~~ 451 (458)
|+|+++||+|++.+|||+||||+|++++|+.||++|++||+.+++..++|..-
T Consensus 410 G~PaisvP~g~~~~GlPvGlQlvg~~~~D~~lL~~a~~le~~~~~~~~~~~~~ 462 (464)
T PRK07042 410 EQPAASINCGFTRDGLPIGLQIVGPRFDDLGVLRLAKAFEGWRGPQRPWPEPP 462 (464)
T ss_pred CCCeEEeecCcCCCCCCeEEEEecCCCcHHHHHHHHHHHHHhccccccCCCcC
Confidence 99999999999889999999999999999999999999999998877777643
No 5
>TIGR02715 amido_AtzE amidohydrolase, AtzE family. Members of this protein family are aminohydrolases related to, but distinct from, glutamyl-tRNA(Gln) amidotransferase subunit A. The best characterized member is the biuret hydrolase of Pseudomonas sp. ADP, which hydrolyzes ammonia from the three-nitrogen compound biuret to yield allophanate. Allophanate is also an intermediate in urea degradation by the urea carboxylase/allophanate hydrolase pathway, an alternative to urease.
Probab=100.00 E-value=3.3e-101 Score=777.43 Aligned_cols=430 Identities=32% Similarity=0.489 Sum_probs=368.9
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||++.| +.+|||+++++|+|+++|+++|+++++|+++||||||||+|||+|+|+|++||+||..+.++.
T Consensus 18 ev~~~~l~ri~~~~---~~lna~~~~~~~~al~~A~~~d~~~~~g~~~gpL~GvPv~vKD~~~v~G~~tt~Gs~~~~~~~ 94 (452)
T TIGR02715 18 AVAEATLARINQAD---GGLNAFTAVTAERALADAARIDADLAAGSPLGPLAGVPFAVKNLFDVAGLTTLAGAKINRDLA 94 (452)
T ss_pred HHHHHHHHHHHHHC---CCccEEEEeCHHHHHHHHHHHHHHHHCCCCCCCcCCCeEEEEeccccCCceeCcCChhhccCC
Confidence 68999999999998 889999999999999999999999999999999999999999999999999999998877665
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++++|+++|++|+++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 95 p~~~dA~vV~rL~~AGAii~GkTn~~Ef~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAag~~~~alGtDtgGSi 174 (452)
T TIGR02715 95 PAKRDATLVQRLSAAGAVLVGALNMDEFAYGFTTENAHYGPTRNPHDLTRIAGGSSGGSAAAVAAGLVPFSLGSDTNGSI 174 (452)
T ss_pred CCCCCHHHHHHHHHCCCEEEEeccCHhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHHHHHHCCCCceEEeeCCCCcc
Confidence 54689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISA 240 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~ 240 (458)
|+|||||||||||||+||+|+.|++|+++++|++|||||||+|+++++++|.++++.|+.+...|...+.. .....+++
T Consensus 175 RiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~~l~g~~~~d~~~~~~p~~~~~~-~~~~~~~~ 253 (452)
T TIGR02715 175 RVPASLCGVFGLKPTYGRLSRQGVFPFVASLDHVGPFARSVEDLALAYDVMQGPDPQDPFCTDRPAEPTVP-LLPAGISG 253 (452)
T ss_pred hhhHHHhCceeeeCCCCCccCCCCCCCccccCcccCeeCCHHHHHHHHHHhcCCCCCCcccccCCCcchhh-hhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999888776543322111100 01234688
Q ss_pred eEEEEeCCCCc-CCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHH
Q 012667 241 IKLAKYDAWFN-DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDA 319 (458)
Q Consensus 241 lrIgv~~~~~~-~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 319 (458)
+|||++.+++. .++++++++++++++.|+.. + ++++|........++.+...|....+..+++. ..+.+.+.+
T Consensus 254 lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~---~--~v~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~ 327 (452)
T TIGR02715 254 LRIAVLGGWFQQNADPEALAAVGRVAKALGAT---T--IVELPDAERARAAAFVITASEGGNLHLDALRT-RPQDFDPAT 327 (452)
T ss_pred CEEEEECccccCCCCHHHHHHHHHHHHhcCCe---e--eecCCchHHHHHHHHHHHHHHHHHHHHHHhhh-chhhcCHHH
Confidence 99999987664 48999999999999988442 2 34455544444445556667777666666554 446789999
Q ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhcccccccccC
Q 012667 320 RVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIAGNFLG 399 (458)
Q Consensus 320 ~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~g 399 (458)
+.++..+..++..+|.++++.|+++++.|+++|+++|+||+||+|.++|++++...............++.||.+||++|
T Consensus 328 ~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~Dvll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G 407 (452)
T TIGR02715 328 RDRLLAGALLPASWYAQAQRFRHWFRDAIRELFQRVDVLIAPATPCSAPLIGQETMIIDGVPVPVRANLGIFTQPISFAG 407 (452)
T ss_pred HHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCcCcccccccCccchhhhhhHHhcCccchhcC
Confidence 99999898899999999999999999999999999999999999999999865211111111111223446899999999
Q ss_pred CCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhc
Q 012667 400 LPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALC 441 (458)
Q Consensus 400 ~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~ 441 (458)
+|+++||+|+ .+|||+||||+|++++|+.||++|++||+..
T Consensus 408 ~PaisvP~g~-~~glPvGlQivg~~~~D~~lL~~a~~le~~~ 448 (452)
T TIGR02715 408 LPVLAAPLPR-PGRLPIGVQLIAAPWREDLCLRAAAVLERQG 448 (452)
T ss_pred CCeEEEeCCC-CCCCCeEEEEECCCCCHHHHHHHHHHHHHhh
Confidence 9999999998 4799999999999999999999999999853
No 6
>PRK06102 hypothetical protein; Provisional
Probab=100.00 E-value=4e-101 Score=776.13 Aligned_cols=421 Identities=30% Similarity=0.454 Sum_probs=368.5
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| + +|||+++++|+|+++|+++|+++++|+++||||||||+|||+|||+|++||+||..+.++.
T Consensus 24 ev~~~~l~ri~~~~---~-~na~~~~~~~~al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~ 99 (452)
T PRK06102 24 QVAEQALDAIASYA---D-QAVFISLTEERAMREAEASSARWRAGRSLGLLDGIPIAWKDLFDVAGSVTTAGSVVLANAA 99 (452)
T ss_pred HHHHHHHHHHHhhC---C-CCEEEEeCHHHHHHHHHHHHHHHHCCCCCCCcCCCeEEEEeccccCCCccCcCChhhccCC
Confidence 68999999999987 5 8999999999999999999999999999999999999999999999999999999877665
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCC--CCCCCCCchHHHHHHHhCCccceeeccCCC
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDP--SKITGGSSSGSAAVVAAGLCPVALGVDGGG 158 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~--~~~~GGSSgGsaaava~g~~~~a~gtD~gG 158 (458)
++++||++|++|+++|||++||||||||+++.+|.|++||+|+||||+ +|+|||||||||++||+|++++++||||||
T Consensus 100 ~~~~dA~vV~rL~~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~~~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgG 179 (452)
T PRK06102 100 PASRDAAVVALLARAGMVSIGRTNMSEFAFSGLGLNPHYGTPVNPRSTDVPRIPGGSSSGSAVAVAAGLVPVAMGTDTGG 179 (452)
T ss_pred CCCCCHHHHHHHHHCCCEEEEeechHhHhcCCCCCCCCCCCCCCCCCCCCCcCCCCCcHHHHHHHHcCCCceEEecCCCC
Confidence 557899999999999999999999999999999999999999999996 799999999999999999999999999999
Q ss_pred ccccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCC
Q 012667 159 SVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSI 238 (458)
Q Consensus 159 SiR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~ 238 (458)
|||+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.++++.+.. ...+
T Consensus 180 SiRiPAa~cGv~G~KPT~G~v~~~G~~~~~~s~d~~Gp~arsv~D~a~~~~~l~g~~~~~~~--------------~~~~ 245 (452)
T PRK06102 180 SVRIPAAFNGLVGYKATRGRYSMDGVFPLAKSLDSLGPLCRSVRDAVWIDAAMRGLTAPDVV--------------RRPL 245 (452)
T ss_pred cchhhhHHhCceeEecCCCcccCCCCcccccccCcccCccCCHHHHHHHHHHHcCCCCcccc--------------ccCC
Confidence 99999999999999999999999999999999999999999999999999999996543210 1235
Q ss_pred CCeEEEEeCCCCc-CCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCC
Q 012667 239 SAIKLAKYDAWFN-DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRL---AHYLTIGSECSTSLSSYLQKINCSD 314 (458)
Q Consensus 239 ~~lrIgv~~~~~~-~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~ 314 (458)
+++|||+..+++. .++++++++++++++.|+++ |++|+++++|.+.+... .+..+...|....+..++.....+.
T Consensus 246 ~~~ri~~~~~~~~~~~~~~v~~~~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 324 (452)
T PRK06102 246 AGLRLVVPETVVFDDAEPGVRAAFEAAVERLQAA-GALVERQAFPAFQEILDLIARHGWLVTAEAFALHQERLDGPDAAR 324 (452)
T ss_pred CCCEEEEecchhcccCCHHHHHHHHHHHHHHHhC-CCEEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhh
Confidence 6789999876543 38999999999999999998 99999999887655433 3344556777766666554323356
Q ss_pred CCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhccccc
Q 012667 315 QGWDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIA 394 (458)
Q Consensus 315 ~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~ 394 (458)
+.+.++.++..+..++..+|.++++.|++++++|.++|+ +|+||+||++.++|++++.... ..........++.||.+
T Consensus 325 ~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~-~D~ll~Pt~~~~ap~~~~~~~~-~~~~~~~~~~~~~~t~~ 402 (452)
T PRK06102 325 MDPRVVKRTRLGRKITASDYIALLEARERLIAQVTRELG-GALLATPTVAHVAPPLAPLEAD-DDLFFATNLKTLRNTMP 402 (452)
T ss_pred CCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCccccccC-chhhhhhhhhhhhcCcc
Confidence 899999999889999999999999999999999999998 8999999999999998652111 11111112233468999
Q ss_pred ccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhcc
Q 012667 395 GNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCI 442 (458)
Q Consensus 395 ~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~ 442 (458)
||++|+|+++||+|+..+|||+||||+|++++|+.||++|++||+.++
T Consensus 403 ~nl~g~PaisvP~g~~~~glPvGlQivg~~~~D~~lL~~a~~le~~l~ 450 (452)
T PRK06102 403 GNFLDMCGVSLPCGTGAAGMPVGLLLSAPAGRDERLLRAALAVEAVIR 450 (452)
T ss_pred ccccCCCeEEEecCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHhc
Confidence 999999999999999889999999999999999999999999999874
No 7
>PRK07486 amidase; Provisional
Probab=100.00 E-value=5.7e-101 Score=782.13 Aligned_cols=443 Identities=27% Similarity=0.362 Sum_probs=371.0
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCH-HHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNE-EDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKV 79 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~-~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~ 79 (458)
||+++|++||+++| +.+|+|++++. +.++++|+++|+++++|+++||||||||+|||+|+|+|++||+||..+.++
T Consensus 30 ev~~~~l~ri~~~~---~~~na~~~~~~~~~al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~ 106 (484)
T PRK07486 30 EVMRAYLAHIERVN---PAVNAIVALRDRDALLAEAAEKDAALARGEYRGWLHGMPQAPKDLAPTKGIRTTLGSPIFADQ 106 (484)
T ss_pred HHHHHHHHHHHHhC---CCCceEEEeCccHHHHHHHHHHHHHHhcCCCCCCcCCCeEEEecccccCCcCcccccHhhCCC
Confidence 68999999999998 88999999977 457999999999999999999999999999999999999999999887765
Q ss_pred CCCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCc
Q 012667 80 RPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGS 159 (458)
Q Consensus 80 ~~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGS 159 (458)
++.+||++|++|+++|||++||||||||+++.++.|++||+|+||||++|+|||||||||++||+|++++|+|||||||
T Consensus 107 -~~~~dA~vV~rLr~AGaii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAaG~~~~aiGtDtgGS 185 (484)
T PRK07486 107 -VPQEDAIVVERMRAAGAIFIGKTNTPEFGLGSHTYNPVYGATRNPYDPSRSAGGSSGGAAAALALRMLPVADGSDMMGS 185 (484)
T ss_pred -CCCCcHHHHHHHHHCCCeeEEecCchHHhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEeecCCCCC
Confidence 4579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccceeecCCCCcccCCCCC-CCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCC
Q 012667 160 VRMPAALCGVVGFKPTFGRIPLSGVL-PLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSI 238 (458)
Q Consensus 160 iR~PAa~~Gv~G~kPt~g~~s~~G~~-p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~ 238 (458)
||+||+||||||||||+|+||+.|.. ++++++|++|||||||+|+++++++|.++|+.|+.+...+..++.. ......
T Consensus 186 IRiPAa~cGvvGlKPT~G~vs~~g~~~~~~~s~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~~~~~~-~~~~~~ 264 (484)
T PRK07486 186 LRNPAAFNNVYGFRPSQGRVPHGPGGDVFVQQLGTEGPMGRTVEDVALLLAVQAGYDPRDPLSLAEDPARFAQ-PLEADL 264 (484)
T ss_pred eecchhhhCceeecCCCCcccCCCCcccccccccccCCeeCCHHHHHHHHHHHhCCCCCCCccccCCCcchhh-HhccCC
Confidence 99999999999999999999999855 7899999999999999999999999999988776543221111110 012346
Q ss_pred CCeEEEEeCCCCc--CCCHHHHHHHHHHHHHHHHhcCcEEEEeeCC-ChHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCC
Q 012667 239 SAIKLAKYDAWFN--DCSDDIRVCCSRAVDKLCERYGWKVVEVTIP-NIEVMRLAHYLTIGSECSTSLSSYLQK-INCSD 314 (458)
Q Consensus 239 ~~lrIgv~~~~~~--~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p-~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~ 314 (458)
+++|||++.+++. .++++++++++++++.|+++ |++|+++.++ ........+......+....+..++.. .+...
T Consensus 265 ~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (484)
T PRK07486 265 RGKRIAWLGDWGGYLPMEAGVLELCEAALATLREL-GCDVEAALPAFPPERLWRAWLTLRHFLVGGSLLALYRDPARRAL 343 (484)
T ss_pred CCCEEEEeCcccCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEeCCCcchHHHHHHHHHHHHHHHHHhHHHHhccccchhh
Confidence 8899999977653 47999999999999999998 9999988765 333222233332222322223333321 12356
Q ss_pred CCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchh-hhcCcchhhhhhhhhcccc
Q 012667 315 QGWDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDA-LKTGELDYIYGAALVRYQI 393 (458)
Q Consensus 315 ~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~t~ 393 (458)
+.+.++.+++.+..++..+|.++++.|+++++.|.++|+++|+||+||++.++|+++... .............+..||.
T Consensus 344 ~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 423 (484)
T PRK07486 344 LKPEAIWEIEGGLALTAAQVYEASVIRSAWYQALLRLFERYDFLALPTAQVFPFDAEWRWPRAIAGRAMDTYHRWMEVVV 423 (484)
T ss_pred cCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCccccccccccccchhhhhhhhhcccc
Confidence 889999999889999999999999999999999999999999999999999998875411 0001111112223345788
Q ss_pred cccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCCc
Q 012667 394 AGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKPK 449 (458)
Q Consensus 394 ~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p~ 449 (458)
+||++|+|+++||+|++.+|||+||||+|++++|+.||++|++||+.++|..+.|.
T Consensus 424 ~~Nl~G~PaisvP~g~~~~glPvGlQlvg~~~~D~~lL~~a~~le~~~~~~~~~p~ 479 (484)
T PRK07486 424 PATLAGLPAISVPVGFNAAGLPMGMQIIGPPRADLAVLQLAHAYEQATDWVQRRPP 479 (484)
T ss_pred cccccCCCeEEEECCcCCCCCceEEEEECCCCCHHHHHHHHHHHHhccCcccCCCc
Confidence 99999999999999998899999999999999999999999999999887656565
No 8
>PRK07487 amidase; Provisional
Probab=100.00 E-value=8.5e-101 Score=777.17 Aligned_cols=427 Identities=26% Similarity=0.344 Sum_probs=371.2
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| +.+|+|+++++|+|+++|+++|+++++|+.+||||||||+|||+|+|+|++||+||..+.++
T Consensus 26 ev~~~~l~ri~~~~---~~lna~~~~~~e~al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~- 101 (469)
T PRK07487 26 EAAEAALARLDAVN---PAINAVVDHRPEEALAQADAVDAARARGDDPGPLAGVPVTVKVNVDQAGFATTNGVRLQKDL- 101 (469)
T ss_pred HHHHHHHHHHHHHC---CCccEEEEeCHHHHHHHHHHhHHHHhcCCCCCCcCCCEEEEecccccCCCccCcchHHhcCC-
Confidence 68999999999998 88999999999999999999999999999999999999999999999999999999877665
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++.+|+++|++||++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 102 ~~~~da~vV~rLr~aGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~d~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSI 181 (469)
T PRK07487 102 IAPADSPVVDNLRKAGAVIIGRTNTPAFSYRWFTDNPLHGRTLNPWDPSLTPGGSSGGAAAAVAAGIGAIAHGTDIGGSI 181 (469)
T ss_pred CCCCchHHHHHHHHCCCEEEEecChhhhhcCCCCCCCCCCCCCCCCCCCCCCCcchHHHHHHHHcCCCceeeecCCCCcc
Confidence 55899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCC----CC-CCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLP----LN-WTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSA 235 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p----~~-~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~ 235 (458)
|+|||||||||||||+|++|+.|+++ ++ +++|++|||||||+|+++++++|.++|+.|+.+...+ . .
T Consensus 182 RiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~~~Gplarsv~D~a~~~~~l~g~d~~d~~~~~~~-----~---~ 253 (469)
T PRK07487 182 RYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMSVQGPLARTVADLRLALAAMAAPDPRDPWWVPAP-----L---E 253 (469)
T ss_pred ccchhhcCceeecCCCCccCCCCCCccccccccccccccCCeeCCHHHHHHHHHHHhCCCCCCCccCCCC-----c---c
Confidence 99999999999999999999999873 43 4789999999999999999999999887765432111 1 1
Q ss_pred CCCCCeEEEEeCCCCc-CCCHHHHHHHHHHHHHHHHhcCcEEEEe-eCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 012667 236 TSISAIKLAKYDAWFN-DCSDDIRVCCSRAVDKLCERYGWKVVEV-TIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCS 313 (458)
Q Consensus 236 ~~~~~lrIgv~~~~~~-~~~~~v~~a~~~a~~~L~~~~G~~Vv~~-~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 313 (458)
...+++|||++.+++. .++++++++++++++.|+++ ||+|+++ ++|.+......+..++..|...++..+++.....
T Consensus 254 ~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 332 (469)
T PRK07487 254 GPPRPKRVALCVRPDGLDVDPEVEAALRDAARRLEDA-GWTVEEVDDTPPLREAAELQERLWLGDGYEALLAAAEAEGDP 332 (469)
T ss_pred CCCCCcEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEecCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhchh
Confidence 2357899999987653 48999999999999999998 9999998 7887776666666777788888877766543334
Q ss_pred CCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhcccc
Q 012667 314 DQGWDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQI 393 (458)
Q Consensus 314 ~~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~ 393 (458)
.+.+.+...++.+..++..+|.++++.|+++++.|.++|+++|+||+||+|.+||+++.... ....+........+|.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~p~~a~~~~~~~~--~~~~~~~~~~~~~~t~ 410 (469)
T PRK07487 333 GALAALRGQRAKARPLDLAGYMNALARRATLTRQWQLFFEDYPLLLMPVSAELPFPDDLDRQ--GAEGFRRVWEAQLPQI 410 (469)
T ss_pred hhhHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCCCCCcCC--chhhhhHHHHhhcccc
Confidence 46666666667788899999999999999999999999999999999999999998864211 1111111111123577
Q ss_pred cccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccc
Q 012667 394 AGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCIS 443 (458)
Q Consensus 394 ~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~ 443 (458)
+||++|+|+++||+|+. +|||+||||||++++|+.||++|++||+.++.
T Consensus 411 ~~nl~G~PaisvP~g~~-~GlPvGlQlvg~~~~D~~lL~~a~~lE~~~~~ 459 (469)
T PRK07487 411 ALPFMGLPGLSVPTGLV-GGVPVGVQLVAGRFREDLCLAAGEAIEARGGP 459 (469)
T ss_pred cccccCCCeEEEECccC-CCcceeEEEeCCCCCHHHHHHHHHHHHHhhCC
Confidence 89999999999999986 69999999999999999999999999999864
No 9
>PRK05962 amidase; Validated
Probab=100.00 E-value=1.7e-100 Score=765.53 Aligned_cols=417 Identities=29% Similarity=0.429 Sum_probs=364.5
Q ss_pred HHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCCCC
Q 012667 3 AERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPC 82 (458)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~~~ 82 (458)
++++++||+++| +.+|+|+++++|+|+++|+++|+++++|+++||||||||+|||+|+|+|++||+||..+.++.++
T Consensus 1 ~~~~l~ri~~~~---~~lna~~~~~~~~al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~ 77 (424)
T PRK05962 1 LEATLARLAARA---GEEHVFSKLYAERARAEADAADARRRAGRSLGPLDGRIVSIKDLFDVAGEPTLAGSVIRRDAPPA 77 (424)
T ss_pred CHHHHHHHHhhC---CcccEEEEECHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEEeeeecCCcccCCCChhhhcCCCC
Confidence 378999999998 88999999999999999999999999999999999999999999999999999999887766554
Q ss_pred CCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcccc
Q 012667 83 TGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRM 162 (458)
Q Consensus 83 ~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSiR~ 162 (458)
++||++|++|+++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++++|||||||||+
T Consensus 78 ~~dA~vV~rL~~aGAiilGKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSiRi 157 (424)
T PRK05962 78 GADALIVQRLRNAGAVIIGKTHMTEFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRI 157 (424)
T ss_pred cCChHHHHHHHHCCCEEEEecCchHHhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEEeeCCCCcchh
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCCeE
Q 012667 163 PAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIK 242 (458)
Q Consensus 163 PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~lr 242 (458)
||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.++++.+.. ....+++|
T Consensus 158 PAa~cGv~GlKPT~G~v~~~G~~~~~~s~d~~Gp~arsv~D~~~~~~vl~g~~~~~~~--------------~~~~~~lr 223 (424)
T PRK05962 158 PAALNGLVGFKPTARRIPLEGAFPLSPSLDSIGPLARTVADCAAADAVMAGEKPIPLE--------------VLPVAGLR 223 (424)
T ss_pred hhHhhCceeeecCCCceeCCCcccCccccCccccccCCHHHHHHHHHHHcCCCCCccc--------------ccCcCCcE
Confidence 9999999999999999999999999999999999999999999999999997654310 11246799
Q ss_pred EEEeCCCCc-CCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHH-HHHHH--HHHHHHHHHHHHHHHHHhcCCCCCCHH
Q 012667 243 LAKYDAWFN-DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEV-MRLAH--YLTIGSECSTSLSSYLQKINCSDQGWD 318 (458)
Q Consensus 243 Igv~~~~~~-~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~-~~~~~--~~~~~~e~~~~~~~~~~~~~~~~~~~~ 318 (458)
||++.+++. .++++++++++++++.|+++ |++|+++++|.+.+ +...+ ..+...|....+..+++. ....+.+.
T Consensus 224 ig~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~ 301 (424)
T PRK05962 224 IGLPKGYLLADMEPDVAAAFEASLAALEKA-GARIADLAIDDLIARLAEATRIGSIAGIEASHIHADWLAD-LDANVDIR 301 (424)
T ss_pred EEEEcccccccCCHHHHHHHHHHHHHHHHC-CCEEEEeccchHHHHHHHHHHHhHHHHHHHHHHHHHHHhh-chhhCCHH
Confidence 999987653 48999999999999999998 99999998875322 22211 134556666666666554 45678999
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhh-hhhhhhcccccccc
Q 012667 319 ARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYI-YGAALVRYQIAGNF 397 (458)
Q Consensus 319 ~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~t~~~Nl 397 (458)
++.++..+..++..+|.++++.|+++++.|+++|+++|+||+||+|.++|+++..... ...+. ....++.||.++|+
T Consensus 302 ~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~--~~~~~~~~~~~~~~t~~~n~ 379 (424)
T PRK05962 302 VKRPLSRRIKVPLEAYHRLMRTRAALARAMDERLAGFDMFALPATPIVAPTIASVSED--EEEYDRVENLLLRNTQVANQ 379 (424)
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCccccccc--hHHHHHHHHHHHhhCcCccc
Confidence 9999999999999999999999999999999999999999999999999998652111 00111 11123458999999
Q ss_pred cCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhcc
Q 012667 398 LGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCI 442 (458)
Q Consensus 398 ~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~ 442 (458)
+|+|+++||++. +|||+||||||++++|+.||++|++||+.+.
T Consensus 380 ~G~Pa~svP~g~--~glPvGlqlvg~~~~D~~lL~~a~~le~~l~ 422 (424)
T PRK05962 380 FDLCSITLPMPG--MALPAGLMLTARNGSDRRLLAAAASVEKLLE 422 (424)
T ss_pred cCCCeEEEECCC--CCCCEEEEEECCCCCHHHHHHHHHHHHHHhc
Confidence 999999999984 6999999999999999999999999999874
No 10
>PRK06170 amidase; Provisional
Probab=100.00 E-value=4.4e-100 Score=777.55 Aligned_cols=439 Identities=24% Similarity=0.368 Sum_probs=365.6
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| +.+|+|+++++|+|+++|+++|+++++| ..||||||||+|||+|+|||++||+||..+.+.
T Consensus 30 ev~~~~l~ri~~~~---~~lna~~~~~~e~al~~A~~~d~~~~~g-~~gpL~GvPv~VKD~~~v~G~~tt~Gs~~~~~~- 104 (490)
T PRK06170 30 ELTDLAIARIERHD---GKINAIVVRDFDRARAAARAADAARARG-ERGPLLGIPVTVKESFNVAGLPTTWGFPDLRDY- 104 (490)
T ss_pred HHHHHHHHHHHHhC---CCcCEEEECCHHHHHHHHHHHHHHHhcC-CCCCcCCceEEEecccccCCcccCCCChhhcCC-
Confidence 68999999999998 8899999999999999999999999888 479999999999999999999999999887765
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++.+|+++|++||++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 105 ~~~~da~vV~rLr~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSi 184 (490)
T PRK06170 105 VPAEDAVAVARLKAAGAVILGKTNVPLGLQDWQSYNEIYGTTNNPWDLARTPGGSSGGSAAALAAGFGALSIGSDIGGSL 184 (490)
T ss_pred CCCccHHHHHHHHHCCCEEEEecCChhhccCCCccCCCCCCCCCCCCCCCCCCCChHHHHHHHHcCCCceeeecCCCCcc
Confidence 55799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCC-----C--CCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccc
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLP-----L--NWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLK 233 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p-----~--~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~ 233 (458)
|+|||||||||||||+||+|+.|++| + ++++|++|||||||+|+++++++|.|+|+.|....... ..+. .
T Consensus 185 RiPAa~cGvvG~KPT~Grv~~~G~~~~~~~~~~~~~~~d~~Gp~arsv~D~a~~l~~l~g~d~~d~~~~~~~--~~~~-~ 261 (490)
T PRK06170 185 RVPAHYCGVYAHKPTLGLVPLRGHIPPPAPALPGQADLAVAGPMARSARDLALLLDVMAGPDPLDGGVAYRL--ALPP-A 261 (490)
T ss_pred ccChHHhCceeecCCCCcCcCCCcCCccccccccccccccccCccCCHHHHHHHHHHHhCCCcccccccccc--CCCc-c
Confidence 99999999999999999999999988 4 34699999999999999999999999887663211100 0110 0
Q ss_pred cCCCCCCeEEEEeCCCCc-CCCHHHHHHHHHHHHHHHHhcCcEEEEee--CCChHHHHHHHHHHHHHHHHHHHH-HHHHh
Q 012667 234 SATSISAIKLAKYDAWFN-DCSDDIRVCCSRAVDKLCERYGWKVVEVT--IPNIEVMRLAHYLTIGSECSTSLS-SYLQK 309 (458)
Q Consensus 234 ~~~~~~~lrIgv~~~~~~-~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~--~p~~~~~~~~~~~~~~~e~~~~~~-~~~~~ 309 (458)
....++++|||++.+++. .++++++++++++++.|+++ |++|++++ ++.+......+..++..+....+. ...+.
T Consensus 262 ~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (490)
T PRK06170 262 RHGRLKDFRVLVLDEHPLLPTDAAVRAAIERLAAALADA-GARVVRHSPLLPDLAESARLYMRLLFAASAARFPPDAYAD 340 (490)
T ss_pred cccccCCCEEEEECCcCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEcCCCCCchHHHHHHHHHHHHHHHhhccchhHHHH
Confidence 123467899999987653 48999999999999999998 99999986 455555555555554444433331 11111
Q ss_pred ----c-CCCCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcC---cch
Q 012667 310 ----I-NCSDQGWDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTG---ELD 381 (458)
Q Consensus 310 ----~-~~~~~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~---~~~ 381 (458)
. ....+.+.++..+..+..++..+|.++++.|+++++.|.++|+++|+||+||++.++|+++....... ..+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~ 420 (490)
T PRK06170 341 AQARAAGLSADDRSLAAERLRGAVLSHRDWLFADAAREELRAAWRRFFAEFDVVLCPVTPTPAFPHDHAPDPLERRIDID 420 (490)
T ss_pred hhhccccccchhHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCCCccccccccccccC
Confidence 0 12235666777778888899999999999999999999999999999999999999999864211000 000
Q ss_pred --hhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCCc
Q 012667 382 --YIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKPK 449 (458)
Q Consensus 382 --~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p~ 449 (458)
.......+.||.+||++|+|+++||+|++.+|||+||||||++++|+.||++|++||+.+.. +++|+
T Consensus 421 ~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlPvGlQlig~~~~D~~LL~~a~~lE~~~~~-~~~~~ 489 (490)
T PRK06170 421 GVSYPYWDQLVWAGLATLPGLPATAIPIGLSATGLPVGVQIVGPALEDRTPLRLAELLEEEFGG-FRPPP 489 (490)
T ss_pred CcccchhhhhhhcceecccCCCeEEEECCcCCCCCceeEEEecCCCCHHHHHHHHHHHHHhcCC-CCCCC
Confidence 00112224689999999999999999998899999999999999999999999999998753 45554
No 11
>PRK06061 amidase; Provisional
Probab=100.00 E-value=6.9e-100 Score=772.45 Aligned_cols=438 Identities=30% Similarity=0.388 Sum_probs=366.1
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| +.+|||+++++|+|+++|+++|+++++|... |||||||+|||+|+|+|++||+||.. ...
T Consensus 36 el~~~~l~ri~~~~---~~lna~~~~~~~~al~~A~~~d~~~~~g~~~-pL~GvPv~vKD~~~v~G~~tt~Gs~~--~~~ 109 (483)
T PRK06061 36 ELVRRSLRRIEASQ---PTLNAFRVVRAEAALAEAAEADRRRAAGDRL-PLLGVPIAVKDDVDVAGVPTAFGTAG--EVP 109 (483)
T ss_pred HHHHHHHHHHHHhC---CcCCEEEEeChHHHHHHHHHHHHHHhcCCCC-CcCCCeEEEEcccccCCceecCCCcc--cCC
Confidence 68999999999998 8899999999999999999999999988764 99999999999999999999999974 334
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++++||++|++|+++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 110 ~a~~dA~vV~~Lr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSI 189 (483)
T PRK06061 110 PATADSEVVRRLRAAGAVIVGKTNTCELGQWPFTSGPAFGHTRNPWSRDHTPGGSSGGSAAAVAAGLVTAAIGSDGAGSV 189 (483)
T ss_pred CCCCCHHHHHHHHHCCCEEEEecCcchhccCCCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHcCCCceEeecCCCCcc
Confidence 55789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISA 240 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~ 240 (458)
|+||+||||||||||+|++|+.|+.++++++|++|||||||+|+++++++|.++|+.|..+...+ ..+. ......++
T Consensus 190 RiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~--~~~~-~~~~~~~~ 266 (483)
T PRK06061 190 RIPAAWTHLVGIKPQRGRISTWPLPEAFNGLTVNGPLARTVADAALLLDAASGNHPGDRHRPPPV--TVSD-AVGRAPGP 266 (483)
T ss_pred hhchhhcCceeecCCCCccCCCCCCcccccCceeCCEeCCHHHHHHHHHHHhCCCCCCCcccCCc--cchh-hhccCCCC
Confidence 99999999999999999999999999989999999999999999999999999887765432111 1111 11234678
Q ss_pred eEEEEeCCCC-----cCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCC
Q 012667 241 IKLAKYDAWF-----NDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKI-NCSD 314 (458)
Q Consensus 241 lrIgv~~~~~-----~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~ 314 (458)
+|||++.+.. ..++++++++++++++.|+++ |++|++++++....... ... .+....+..+.+.. ....
T Consensus 267 lrig~~~~~~~~~~~~~~~p~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~ 341 (483)
T PRK06061 267 LRIALSTRFPFTGFPAKLHPEIRAAVRRVAEQLALL-GHTVVPADPDYGLRLGL-NFL---PRSTAGLRDWAERLGDPVL 341 (483)
T ss_pred cEEEEECCccccccccCCCHHHHHHHHHHHHHHHHC-CCEEEEeCCchhhHHHH-HHH---HHHHHHHHHHHhhccChhh
Confidence 9999987542 237999999999999999998 99999987542211111 111 11112222232221 2345
Q ss_pred CCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhccccc
Q 012667 315 QGWDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIA 394 (458)
Q Consensus 315 ~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~ 394 (458)
+.+.++.+++.+..++..+|.++++.|+++++.|.++|+++|+||+||+|.++|+++................+..||.+
T Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~p~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~ 421 (483)
T PRK06061 342 LDPRTVSNARMGRLLSQAILRLARAAEAAAQRRVGSIFDIVDVVLAPTTAQPPPRVGAFDRLGGWATDRAMIAACPYTWP 421 (483)
T ss_pred CCHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEEcCCCCCCCCCcccccccccchhhhhhhhccccccc
Confidence 78999999999999999999999999999999999999999999999999999998752211011000011233458999
Q ss_pred ccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCCchhh
Q 012667 395 GNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKPKVFH 452 (458)
Q Consensus 395 ~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p~~~~ 452 (458)
||++|+|+++||+|++.+|||+||||||++++|+.||++|++||++++|..+.|..|+
T Consensus 422 ~Nl~G~PaisvP~g~~~~GlPvGlQivg~~~~D~~LL~~A~~le~~~~~~~~~p~~~~ 479 (483)
T PRK06061 422 WNVLGWPSINVPAGFTSDGLPIGAQLMGPANSEPLLISLAAQLEAVSGWAERQPPVWW 479 (483)
T ss_pred ccccCCCeEEEecCcCCCCCCeeeEEECCCCCHHHHHHHHHHHHhhcCcccCCCCccc
Confidence 9999999999999998899999999999999999999999999999988656676654
No 12
>PRK07056 amidase; Provisional
Probab=100.00 E-value=5.4e-100 Score=768.28 Aligned_cols=420 Identities=30% Similarity=0.442 Sum_probs=369.5
Q ss_pred CHHHHHHHHHHhhCCCCCC-ceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccC
Q 012667 1 MVAERFIAAVRESSNPPMK-MSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKV 79 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~-~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~ 79 (458)
||+++|++||+++| +. +|||+++++|+|+++|+++|+++++|+++||||||||+|||+|+|+|++||+||..+.++
T Consensus 24 ev~~~~l~ri~~~~---~~~lna~~~~~~~~al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~ 100 (454)
T PRK07056 24 ALVEAALARIADPA---GEGARVFTHVDADAARAAADAADALRAAGAAPSPLAGIPVSVKDLFDVAGQVTRAGSRVLADA 100 (454)
T ss_pred HHHHHHHHHHHhhC---CCCccEEEEeCHHHHHHHHHHHHHHHhCCCCCCCcCCCeEEEEeeeccCCCccCCCChhhccC
Confidence 68999999999997 64 999999999999999999999999999999999999999999999999999999887766
Q ss_pred CCCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCC----CCCCCCCCCchHHHHHHHhCCccceeecc
Q 012667 80 RPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPY----DPSKITGGSSSGSAAVVAAGLCPVALGVD 155 (458)
Q Consensus 80 ~~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~----~~~~~~GGSSgGsaaava~g~~~~a~gtD 155 (458)
.++++||++|++||++|||++||||||||+++.+|.|++||+|+||| |++|+|||||||||++||+|++++++|||
T Consensus 101 ~~~~~dA~vV~rLr~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~~~~~GGSSgGsAaaVAag~~~~alGtD 180 (454)
T PRK07056 101 PPAAADAPAVARLRRAGAVLIGRTNMTEFAFSGLGLNPHYGTPRNPWRRDVGDGRIPGGSSSGAAVSVADGMAAAALGTD 180 (454)
T ss_pred CCCCCCHHHHHHHHHCCCEEEEeccchhHhhCCCCCCCCCCCCCCCCCCCCCCCcCCCCcchHHHHHHHcCCCceEEeeC
Confidence 54468999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred CCCccccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccC
Q 012667 156 GGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSA 235 (458)
Q Consensus 156 ~gGSiR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~ 235 (458)
||||||+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.++|+.|+. .
T Consensus 181 tgGSIRiPAa~cGv~GlKPT~G~vs~~G~~~~~~~~d~~Gp~arsv~D~a~~~~vl~g~d~~d~~--------------~ 246 (454)
T PRK07056 181 TGGSIRIPAALCGLTGFKPTARRVPLQGAVPLSTTLDSIGPLARSVACCALVDAVLAGEEPVVPA--------------A 246 (454)
T ss_pred CCCccccchHhhCceeeccCCCccCCCCcccCccccCcccCccCCHHHHHHHHHHhcCCCCCCcc--------------c
Confidence 99999999999999999999999999999999999999999999999999999999997765431 1
Q ss_pred CCCCCeEEEEeCCCCc-CCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHH--HHHHHHHHHHHHHHHHHhcCC
Q 012667 236 TSISAIKLAKYDAWFN-DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAH--YLTIGSECSTSLSSYLQKINC 312 (458)
Q Consensus 236 ~~~~~lrIgv~~~~~~-~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~--~~~~~~e~~~~~~~~~~~~~~ 312 (458)
...+++|||++.+++. .++++++++++++++.|+++ |++|+++++|.+......+ ..+...|.+..+..++.. +.
T Consensus 247 ~~~~~lrig~~~~~~~~~~~~~v~~~~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~ 324 (454)
T PRK07056 247 RPLEGLRLAVPTTVVLDGLDATVAAAFERALKRLSAA-GAIIEEIAFPELAELAEINAKGGFSAAESYAWHRPLLAR-HR 324 (454)
T ss_pred ccccCcEEEEcchhhccCCCHHHHHHHHHHHHHHHHC-CCEEEEecCcchHHHHHHHHhhhHHHHHHHHHHHHHHhh-hh
Confidence 1357799999877653 38999999999999999998 9999999988765543332 234456666666666654 45
Q ss_pred CCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchh-hhhhhhhcc
Q 012667 313 SDQGWDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDY-IYGAALVRY 391 (458)
Q Consensus 313 ~~~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~ 391 (458)
..+.+.++.++..+..++..+|.++++.|+.+++.|.++|+++|+||+||+|.++|++++.... ...+ .....++.|
T Consensus 325 ~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~--~~~~~~~~~~~~~~ 402 (454)
T PRK07056 325 DQYDPRVAARILRGEPMSAADYIDLLAARAAWIARAAARLARFDALVMPTVPIVPPRIADLEAD--DAAFFRTNALLLRN 402 (454)
T ss_pred hhCCHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHccCCEEEECCCCCCCCCccccccc--chhhHHHHHHHhhc
Confidence 6789999999999999999999999999999999999999999999999999999998652111 1111 111123458
Q ss_pred cccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhcc
Q 012667 392 QIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCI 442 (458)
Q Consensus 392 t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~ 442 (458)
|.+||++|+|+++||+|. .+|||+||||+|++++|+.||++|++||+.+.
T Consensus 403 t~~~nl~g~PaisvP~g~-~~glPvGlqivg~~~~D~~lL~~a~~le~~l~ 452 (454)
T PRK07056 403 PSLINFLDGCALSLPCHA-PGEAPVGLMLAGAPGRDDRLLAIALAVEAVLR 452 (454)
T ss_pred CccchhcCCCEEEEeCCC-CCCCCEEEEEECCCCCHHHHHHHHHHHHHHhc
Confidence 999999999999999997 47999999999999999999999999999874
No 13
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed
Probab=100.00 E-value=9e-100 Score=769.91 Aligned_cols=426 Identities=35% Similarity=0.564 Sum_probs=363.0
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||++.| +.+|||+++++|+|+++|+++|+++++|+ +||||||||+|||+|||+|++||+||..+.+.
T Consensus 10 ev~~~~l~ri~~~~---~~lna~~~~~~~~al~~A~~~d~~~~~g~-~gpL~GvPv~vKD~~~v~G~~tt~Gs~~~~~~- 84 (459)
T PRK00012 10 ELTQAYLDRIEEVD---PKLNAFITVTEEEALAQAKAADAKLAAGE-AGPLAGIPIAIKDNICTKGIRTTCASKILENY- 84 (459)
T ss_pred HHHHHHHHHHHHhc---ccCCeEEEeCHHHHHHHHHHHHHHHhcCC-CCccCCeEEEEecccccCCCccCccCHhhccC-
Confidence 68999999999998 88999999999999999999999999888 89999999999999999999999999877665
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++.+|+++|++||++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 85 ~~~~da~vV~~Lr~aGAiilGkTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSi 164 (459)
T PRK00012 85 VPPYDATVVEKLKAAGAVILGKTNMDEFAMGSSTENSAFGPTKNPWDLERVPGGSSGGSAAAVAAGLAPAALGSDTGGSI 164 (459)
T ss_pred CCCcchHHHHHHHHCCCEEEeeccchhhhcCCCCCCCCCCCcCCCCCCCCCCCCCcHHHHHHHHcCCCceEEeeCCCCcc
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISA 240 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~ 240 (458)
|+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.++|+.|..+...+...+... .....++
T Consensus 165 RiPAa~cGvvG~KPT~G~vp~~G~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~~~~~~~-~~~~~~~ 243 (459)
T PRK00012 165 RQPAAFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPFARTVEDAALLLNAIAGHDPKDSTSADVPVPDYTAA-LGKDIKG 243 (459)
T ss_pred chhHHHcCceeecCCCCcccCCCCcCcccCCCcccCccCCHHHHHHHHHHHhCCCCCCcccccCCCCchhhh-hcccccc
Confidence 999999999999999999999999999999999999999999999999999998877654432221111110 1234688
Q ss_pred eEEEEeCCCCc-CCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHH------------
Q 012667 241 IKLAKYDAWFN-DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYL------------ 307 (458)
Q Consensus 241 lrIgv~~~~~~-~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~------------ 307 (458)
+|||++.+.+. .++++++++++++++.|+++ |++|+++++|.+......+..++..|...++..+.
T Consensus 244 lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (459)
T PRK00012 244 LKIGVPKEYFGEGLDPEVKEAVEAAIKKLEDL-GAEIVEVSLPHTKYALPAYYIIAPAEASSNLARYDGVRYGYRAEDAK 322 (459)
T ss_pred cEEEEEcccccccCCHHHHHHHHHHHHHHHHC-CCEEEEeCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccccccc
Confidence 99999987653 48999999999999999998 99999999887665555555555666655444331
Q ss_pred ------HhcCCCCCCHHHHHHHHhccCC-----CHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhh
Q 012667 308 ------QKINCSDQGWDARVALSVYGSF-----SSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALK 376 (458)
Q Consensus 308 ------~~~~~~~~~~~~~~~l~~~~~~-----s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~ 376 (458)
...+...+++.++.++..+..+ ...+|.++++.|+++++.|.++|+++|+||+||++.++|+++....
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~- 401 (459)
T PRK00012 323 DLEEMYEKTRSEGFGEEVKRRIMLGTYVLSAGYYDAYYLKAQKVRTLIKQDFEKAFEKVDVILGPTAPTTAFKIGEKTD- 401 (459)
T ss_pred cHHHHHhhhhhhccCHHHHHHHHhCcchhccccchHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCcccccccC-
Confidence 1112234677777777655543 2345888999999999999999999999999999999999865211
Q ss_pred cCcchhhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHH
Q 012667 377 TGELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQ 438 (458)
Q Consensus 377 ~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE 438 (458)
....... .+.||.+||++|+|+++||+|++.+|+|+||||+|++++|+.||++|++||
T Consensus 402 ---~~~~~~~-~~~~t~~~n~~G~PaisvP~g~~~~glPvGlqlvg~~~~D~~LL~~a~~~E 459 (459)
T PRK00012 402 ---DPLAMYL-SDIFTVPANLAGLPAISVPAGFDDGGLPVGLQLIGKYFDEETLLNVAYAFE 459 (459)
T ss_pred ---chHhhhc-cccccccccccCCCcEEEecCCCCCCCCEEEEEECCCCchHHHHHHHHHhC
Confidence 1111111 123899999999999999999998899999999999999999999999987
No 14
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species.
Probab=100.00 E-value=1.2e-99 Score=769.08 Aligned_cols=424 Identities=32% Similarity=0.496 Sum_probs=360.1
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| +.+|||+++++|+|+++|+++|++++ ||||||||+|||+|+|+|++||+||..+.+..
T Consensus 14 ev~~~~l~ri~~~~---~~~na~~~~~~~~al~~A~~~d~~~~-----gpL~GvPv~vKD~~~v~G~~tt~Gs~~~~~~~ 85 (460)
T TIGR00132 14 EVLEASLDRIEANK---DKINAFLEVTVEKALKQAKKLDKAIL-----TPLAGIPIAVKDNISTKGIVTTCASKILENYI 85 (460)
T ss_pred HHHHHHHHHHHHhc---ccCCeEEEcCHHHHHHHHHHHHHhcc-----CCcCCcEEEEecccccCCcccCcCChhhccCC
Confidence 68999999999998 88999999999999999999998754 89999999999999999999999998776654
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
+.+|+++|++|+++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 86 -~~~dA~vV~~L~~aGAii~GKTn~~E~a~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSI 164 (460)
T TIGR00132 86 -PPYDATVIERLKQAGALIIGKTNMDEFAMGSSTETSAFGPTKNPWNLDRVPGGSSGGSAAAVAADLAPFSLGSDTGGSI 164 (460)
T ss_pred -CCCchHHHHHHHHCCCEEEEEechhHHhcCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCCeEeecCCCCcc
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISA 240 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~ 240 (458)
|+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.++++.|..+...|..++... .....++
T Consensus 165 RiPAa~cGv~G~KPT~G~vs~~G~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~~~~d~~~~~~~~~~~~~~-~~~~~~~ 243 (460)
T TIGR00132 165 RQPASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVEDIALLLDVISGHDKRDSTSAKVPDPEFFEE-LKKDLKG 243 (460)
T ss_pred hhhhHhcCceeECCCCCcCCCCCCcCcccCCCcccCeeCCHHHHHHHHHHHcCCCCCCCcccCCCccchhhh-hhcccCC
Confidence 999999999999999999999999999999999999999999999999999998887755432222111110 1124678
Q ss_pred eEEEEeCCCCcCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHH--------------
Q 012667 241 IKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSY-------------- 306 (458)
Q Consensus 241 lrIgv~~~~~~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~-------------- 306 (458)
+|||+..+++..++++++++++++++.|+++ |++|+++++|.+......+..++..|...++..+
T Consensus 244 lrig~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 322 (460)
T TIGR00132 244 LKVGVVKEFSEEMDKEVQEKFENALEVLEEL-GAEIVEVSFPHVKYALPIYYIISPSEASSNLARYDGIRYGYRIEEPNS 322 (460)
T ss_pred CEEEEECcccccCCHHHHHHHHHHHHHHHHC-CCEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence 9999998765558999999999999999998 9999999988766655555555556655444332
Q ss_pred ----HHhcCCCCCCHHHHHHHHhccCCC-----HHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhc
Q 012667 307 ----LQKINCSDQGWDARVALSVYGSFS-----SQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKT 377 (458)
Q Consensus 307 ----~~~~~~~~~~~~~~~~l~~~~~~s-----~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~ 377 (458)
+...+...+.+.++.++..+...+ ..+|.++++.|+++++.|.++|+++|+||+||++.++|++++...
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~-- 400 (460)
T TIGR00132 323 LKELYAKTRAEGFGEEVKRRIMLGNYALSAGYYDKYYLKAQKVRTLIIDDFLKLFEEVDVIVSPTAPTLPFKIGEKLD-- 400 (460)
T ss_pred HHHHHhhcchhhcCHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCCcccccC--
Confidence 221122346677777776665443 345889999999999999999999999999999999999865211
Q ss_pred CcchhhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHh
Q 012667 378 GELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQAL 440 (458)
Q Consensus 378 ~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~ 440 (458)
. ..... ..+.||.+||++|+|+++||+|+..+|+|+||||+|++++|+.||++|++||+.
T Consensus 401 ~--~~~~~-~~~~~t~~~nl~g~PaisvP~g~~~~GlPvGlqlig~~~~D~~lL~~A~~le~~ 460 (460)
T TIGR00132 401 D--PLEMY-LSDILTVPANLAGLPAISVPCGVKEKGLPIGLQIIGKCFDDKTLLQVSYAFEQA 460 (460)
T ss_pred c--hHhhh-cccceeccccccCCCcEEEecCcCCCCCCeeEEEECCCCchHHHHHHHHHHhhC
Confidence 0 11111 112379999999999999999998899999999999999999999999999973
No 15
>PRK12470 amidase; Provisional
Probab=100.00 E-value=3.4e-99 Score=763.28 Aligned_cols=430 Identities=28% Similarity=0.364 Sum_probs=356.4
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| +.+|+|+.+++|+|+++|+++|+++++|+++ |||||||+|||+|||+|++||+||..+ . .
T Consensus 27 e~~~~~l~ri~~~~---~~lna~~~~~~~~a~~~A~~~d~~~~~g~~~-pL~GvPi~vKD~~~v~G~~tt~Gs~~~-~-~ 100 (462)
T PRK12470 27 MLLEVYLQRIERLD---SHLRAYRVVLFDRARAEAEAAQQRLDAGERL-PLLGVPIAIKDDVDVAGEVTTYGSAGH-G-P 100 (462)
T ss_pred HHHHHHHHHHHHHC---CCcCEEEEeCHHHHHHHHHHhHHHHhcCCCC-CcCCCeEEEecCcccCCceeCCCCccc-C-C
Confidence 68999999999998 8899999999999999999999999999888 999999999999999999999999864 4 4
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++.+|+++|++|+++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 101 ~~~~dA~vV~rLr~aGaii~GKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~alGtDtgGSi 180 (462)
T PRK12470 101 AATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWDPNRTPGGSSGGSAAAVAAGLAPVALGSDGGGSI 180 (462)
T ss_pred CCCccHHHHHHHHHCCCeEEEEeChHhHhcCCCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHcCCCceEEecCCCCch
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISA 240 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~ 240 (458)
|+|||||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.+.+..+. ++.. ......++
T Consensus 181 RiPAa~cGvvG~KPT~G~vs~~g~~~~~~~ld~~Gp~ar~v~D~a~~~~vl~~~~~~~~--------~~~~-~~~~~~~~ 251 (462)
T PRK12470 181 RIPSTWCGLFGLKPQRDRISLEPHDGAWQGLSVNGPIARSVMDAALLLDATTTVPGPEG--------EFVA-AAAREPGR 251 (462)
T ss_pred hhchhhhCceeecCCCCCcCCCCCCCcccCccccCCeeCCHHHHHHHHHHhcCCCCCCc--------chhh-hhccCCCC
Confidence 99999999999999999999999999999999999999999999999999998543321 0100 00123577
Q ss_pred eEEEEeCCCC----cCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 012667 241 IKLAKYDAWF----NDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQG 316 (458)
Q Consensus 241 lrIgv~~~~~----~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 316 (458)
+|||++.+++ ..++++++++++++++.|+++ |++|++++++ +.......+.....+...... ... .....+.
T Consensus 252 lrig~~~~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~ 327 (462)
T PRK12470 252 LRIALSTRVPTPLPVRCGKQELAAVHQAGALLRDL-GHDVVVRDPD-YPAATYANYLPRFFRGISDDA-DAQ-AHPDRLE 327 (462)
T ss_pred CEEEEECCccccCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEeCCC-chhHHHHHHHHHHHHHHHHhh-ccc-cChhhcC
Confidence 9999997653 337999999999999999998 9999998744 222111111110011111110 011 1335588
Q ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhccccccc
Q 012667 317 WDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIAGN 396 (458)
Q Consensus 317 ~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~N 396 (458)
+.++.++..+..++..+|....+.+.++++.++++|+++|+||+||+|.++|+++................+..||.++|
T Consensus 328 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ll~Pt~p~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~n 407 (462)
T PRK12470 328 ARTRAIARLGSFFSDRRMAALRAAEVVLSARIQSIFDDVDVVVTPGTATGPSRIGAYQRRGAVSTLLLVVQRVPYFQVWN 407 (462)
T ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCCCCCCCCCCccCCCcchhhhhhhhhccCcCccch
Confidence 99999999999999888874444455889999999999999999999999999864211100001111123445899999
Q ss_pred ccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCCc
Q 012667 397 FLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKPK 449 (458)
Q Consensus 397 l~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p~ 449 (458)
++|+|+++||+|++.+|||+||||||++++|..||++|++||+..+|..+.|+
T Consensus 408 l~G~PaisvP~g~~~~GlPvGlqlvg~~~~D~~LL~~A~~le~~~~~~~~~p~ 460 (462)
T PRK12470 408 LTGQPAAVVPWDFDGDGLPMSVQLVGRPYDEATLLALAAQIESARPWAHRRPP 460 (462)
T ss_pred hcCCCeEEEecCcCCCCCceEEEEECCCCcHHHHHHHHHHHHccCCccccCCC
Confidence 99999999999998899999999999999999999999999999887656665
No 16
>PRK07488 indole acetimide hydrolase; Validated
Probab=100.00 E-value=7.8e-99 Score=764.18 Aligned_cols=425 Identities=33% Similarity=0.483 Sum_probs=364.6
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||++++ .+|||+++++|+|+++|+++|+++++|++++ ||||||+|||+|||+|++||+||..+.++.
T Consensus 29 ev~~~~l~ri~~~~----~lna~~~~~~~~al~~A~~~d~~~~~g~~~g-L~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~ 103 (472)
T PRK07488 29 ELVEALLARAAALA----PLNAFTTVDAEGALAAARRIDAQRAAGAALL-LAGVPIVIKDNINTAGMPTTAGTPALLGFV 103 (472)
T ss_pred HHHHHHHHHHHHhC----cCCEEEEcCHHHHHHHHHHHHHHHhcCCCCC-cCceEEEEEcccccCCCccCcCChhhccCC
Confidence 68999999999974 4999999999999999999999999998888 999999999999999999999998877665
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
+.+|+++|++||++|||++||||||||+++.+|.|++||+|+||||++++|||||||||++||+|++++|+||||||||
T Consensus 104 -~~~dA~vV~rLr~aGAii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~alGtDtgGSI 182 (472)
T PRK07488 104 -PATDAPVVQRLLDAGAVPLGKANMHELAFGITSNNGAFGAVRNPYDPARIAGGSSGGTAAAVAARLAPAGLGTDTGGSV 182 (472)
T ss_pred -CCCCHHHHHHHHHCCCeeeeccChhHHhcCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHcCCCceeeecCCCCCe
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISA 240 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~ 240 (458)
|+||+||||||||||+|++|++|++|+++++|++|||||||+|+++++++|.++|+.+. ...+++
T Consensus 183 RiPAa~cGvvG~KPT~G~vs~~G~~p~~~~~d~~Gp~arsv~D~a~~~~vl~g~d~~~~---------------~~~~~~ 247 (472)
T PRK07488 183 RIPAALCGVVGLRPTVGRYSGDGVVPISHTRDTVGPIARSVADLALLDAVITGDAALPA---------------PVALAG 247 (472)
T ss_pred ecChHhhCceeeccCCCCCCCCCcccccccCCcccCccCCHHHHHHHHHHhcCCCCCCC---------------CcCcCC
Confidence 99999999999999999999999999999999999999999999999999999665321 123578
Q ss_pred eEEEEeCCCC-cCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHH-HHHHHHHHHHHHHHHHHHhcCCC-----
Q 012667 241 IKLAKYDAWF-NDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLA-HYLTIGSECSTSLSSYLQKINCS----- 313 (458)
Q Consensus 241 lrIgv~~~~~-~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~----- 313 (458)
+|||++.+++ ..++++++++++++++.|+++ |++|+++++|.+.+.... +..+...|...++.+++......
T Consensus 248 lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 326 (472)
T PRK07488 248 LRLGVPAAPFWDGLDPDVAAVAEAALAKLAAA-GVTFVELDLPGLHELNEAVGFPIALYEALADLRAYLRENGAGVSFEE 326 (472)
T ss_pred CEEEEEcchhccCCCHHHHHHHHHHHHHHHHC-CCEEEeeCCcCHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCCHHH
Confidence 9999997654 348999999999999999998 999999998876654332 34556678877777776542111
Q ss_pred ----CCCHHHHHHHHh---ccCCCHHHHHHHHHH-HHHHHHHHHHHhc--cCCEEEccCCCCCcccccchhhhc-Ccchh
Q 012667 314 ----DQGWDARVALSV---YGSFSSQEYIKAQKI-RNHQMQIHRNVFA--KADVIVVPTTGVTAYEIKDDALKT-GELDY 382 (458)
Q Consensus 314 ----~~~~~~~~~l~~---~~~~s~~~y~~a~~~-r~~~~~~~~~~f~--~~D~ll~Pt~~~~a~~~~~~~~~~-~~~~~ 382 (458)
...+.++..+.. +..++..+|.++++. |+.+++.+.++|+ ++|+||+||++.++|++++..... .....
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~~~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~ 406 (472)
T PRK07488 327 LVARIASPDVRAIFRDLLDPPQISEDAYRAALDVGRPRLQAWYRQAFARHGLDAILFPTTPLTAPPIGDDDTVILNGAAV 406 (472)
T ss_pred HHhhccCHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEeCCCCCCCccccccccccccccch
Confidence 125666655432 346788999999888 8999999999998 789999999999999987531110 11111
Q ss_pred hhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCC
Q 012667 383 IYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKP 448 (458)
Q Consensus 383 ~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p 448 (458)
..+..+..||.++|++|+|+|+||+|++.+|||+||||+|++++|..||++|++||+.+++ +++|
T Consensus 407 ~~~~~~~~~t~~~n~~G~PaisvP~g~~~~glPvGlqlig~~~~d~~LL~~A~~lE~~~~~-~~~~ 471 (472)
T PRK07488 407 PTFARVIRNTDPASNAGLPGLSLPAGLTPHGLPVGLELDGPAGSDRRLLAIGRALERVLGR-LPAP 471 (472)
T ss_pred hhhhhhhcccccccccCCCeEEEecCCCCCCCCeeEEEeCCCCCHHHHHHHHHHHHHhhCC-CCCC
Confidence 2223445689999999999999999998899999999999999999999999999999853 4444
No 17
>PRK08137 amidase; Provisional
Probab=100.00 E-value=5.8e-99 Score=769.83 Aligned_cols=433 Identities=29% Similarity=0.440 Sum_probs=367.3
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCC-CccCCCCccccccC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCS-PYPTTGGTKWLHKV 79 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~-g~~tt~Gs~~~~~~ 79 (458)
||+++|++||+++++.|+.+|||++++++ |+++|+++|+++++|+++||||||||+|||+|+|+ |++||+||..+.+.
T Consensus 24 ev~~~~l~ri~~~~~~~~~lna~~~~~~~-al~~A~~~d~~~~~g~~~gpL~GvPi~vKD~~~v~~G~~tt~Gs~~~~~~ 102 (497)
T PRK08137 24 QLTRAYLQRIARIDRDGPRLNAVIELNPD-AEADAAALDAERKAGKVRGPLHGIPVLLKDNIDAADPMPTTAGSLALAGN 102 (497)
T ss_pred HHHHHHHHHHHHhcCCCCceeEEEEeCHH-HHHHHHHHHHHHhcCCCCCCcCCceeeeecceeecCCCCcCcCcHhhcCC
Confidence 68999999999997667899999999885 99999999999999999999999999999999999 99999999877665
Q ss_pred CCCCCCHHHHHHHHHcCCeEEEeccccccccC-----CCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeec
Q 012667 80 RPCTGDACCVMRLRLCGAILVGKTNMHELGAG-----TSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGV 154 (458)
Q Consensus 80 ~~~~~da~~v~~L~~aGai~~gkt~~~e~~~~-----~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gt 154 (458)
++.+|+++|++||++|||++||||||||+++ .+++|++||+|+||||++|+|||||||||++||+|++++|+||
T Consensus 103 -~~~~DA~vV~rLr~AGAii~GKTn~~Efa~~~~~~~~~g~n~~~G~t~NP~~~~~~~GGSSgGsAaAVAaG~~~~aiGt 181 (497)
T PRK08137 103 -RPTRDAFLVARLRDAGAVILGKANLSEWANFRSTRSSSGWSARGGLTRNPYALDRSPCGSSSGSGAAVAAGLAAVAIGT 181 (497)
T ss_pred -CCCcCcHHHHHHHHCCCEEEeecChHHhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCccHHHHHHHcCCCceeeec
Confidence 5579999999999999999999999999954 4468999999999999999999999999999999999999999
Q ss_pred cCCCccccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC--Cccccc
Q 012667 155 DGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK--VSFPLL 232 (458)
Q Consensus 155 D~gGSiR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~--~~~~~~ 232 (458)
|||||||+||+||||||||||+||+|+.|++|+++++|++|||||||+|+++++++|.++|+.|+.+...|. .++...
T Consensus 182 DtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~vl~g~d~~d~~~~~~~~~~~~~~~~ 261 (497)
T PRK08137 182 ETDGSITCPAAINGLVGLKPTVGLVSRDGIVPISHSQDTAGPMTRTVADAAAVLTAIAGGDPADPATASAPAPAVDYVAA 261 (497)
T ss_pred CCCCccccchhhcCeeeecCCCCceeCCCCCCcccccCcccCeeCCHHHHHHHHHHHhCCCCCCcccccCCCCccchhhh
Confidence 999999999999999999999999999999999999999999999999999999999999888765543321 111110
Q ss_pred ccCCCCCCeEEEEeCCCCcCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHHHhc--
Q 012667 233 KSATSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKI-- 310 (458)
Q Consensus 233 ~~~~~~~~lrIgv~~~~~~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~-- 310 (458)
.....++++||||+.+++ .++++++++++++++.|+++ |++|+++++|.+..+...+..+...|...++..++...
T Consensus 262 ~~~~~~~~lrIgv~~~~~-~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 339 (497)
T PRK08137 262 LDADALRGARLGVARNYL-GYHPEVDAQFERALAELKAA-GAVVIDVVDLDDGDWGEAEKVVLLHEFKAGLNAYLRSTAP 339 (497)
T ss_pred ccccccCCCEEEEEchhc-cCCHHHHHHHHHHHHHHHHC-CCEEEeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 011236889999997754 48999999999999999998 99999999876655555566666777766666554321
Q ss_pred --------------------CCCCCCHHHHHHHHhccCCCHHHHHHHHHHHHHH--HHHHHHHhc--cCCEEEccCCCCC
Q 012667 311 --------------------NCSDQGWDARVALSVYGSFSSQEYIKAQKIRNHQ--MQIHRNVFA--KADVIVVPTTGVT 366 (458)
Q Consensus 311 --------------------~~~~~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~--~~~~~~~f~--~~D~ll~Pt~~~~ 366 (458)
....+.+.++.++..+..++..+|.++++.+++. ++.|.++|+ ++|+||+||++ +
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~D~ll~Pt~~-~ 418 (497)
T PRK08137 340 HAPVRTLADLIAFNRAQHAREMPYFGQELFEQAQAAPGLDDPAYLDALADAKRLAGPEGIDAALKEHRLDALVAPTTG-P 418 (497)
T ss_pred CCCCCCHHHHHHHhhccchhhhcccCHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEeCCCC-C
Confidence 0134667788888888889999999998755554 378999997 78999999998 8
Q ss_pred cccccchhhhcCcchhhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCC
Q 012667 367 AYEIKDDALKTGELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFR 446 (458)
Q Consensus 367 a~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~ 446 (458)
+|+++... .. .. ...+|.+||++|+|+++||+|+. +|||+||||+|++++|+.||++|++||+..+| ++
T Consensus 419 ap~~~~~~---~~-~~-----~~~~t~~~nl~G~PaisvP~g~~-~GlPvGvQlig~~~~d~~LL~~a~~lE~~~~~-~~ 487 (497)
T PRK08137 419 AWLIDLIN---GD-SF-----GGSSSTPAAVAGYPHLTVPMGQV-QGLPVGLSFIGAAWSEARLLELGYAYEQATHA-RR 487 (497)
T ss_pred Cccccccc---cc-cc-----ccccccccHhhCCCeEEEeCCCC-CCcCeEEEEECCCCCHHHHHHHHHHHHHhcCc-CC
Confidence 88885421 11 10 11367899999999999999997 89999999999999999999999999999764 45
Q ss_pred CCc
Q 012667 447 KPK 449 (458)
Q Consensus 447 ~p~ 449 (458)
+|.
T Consensus 488 ~p~ 490 (497)
T PRK08137 488 EPR 490 (497)
T ss_pred CCC
Confidence 553
No 18
>PRK08186 allophanate hydrolase; Provisional
Probab=100.00 E-value=1.1e-96 Score=759.93 Aligned_cols=423 Identities=30% Similarity=0.391 Sum_probs=366.1
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCH-HHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNE-EDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKV 79 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~-~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~ 79 (458)
||+++|++||++ + +.+|+|+.+.. ++++++|+++|++++ ..+|||||||+|||||||+|++||+||+.+. +
T Consensus 25 evv~a~l~ri~~-~---~~~~a~i~~~~~~~a~~~A~~ld~~~~---~~gPL~GVP~aVKDnidvaG~pTTaGs~~~~-~ 96 (600)
T PRK08186 25 AVVAALYARIAA-V---DDPEVWIHLRPEADLLAQAAALEARDP---AALPLYGVPFAVKDNIDVAGLPTTAACPAFA-Y 96 (600)
T ss_pred HHHHHHHHHHHh-c---CCCCEEEEeCchHHHHHHHHHHhhhcc---ccCCCCCCeEEeecceecCCcccCcCCHhHc-C
Confidence 689999999998 4 57999999987 689999999998765 3589999999999999999999999998774 4
Q ss_pred CCCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCc
Q 012667 80 RPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGS 159 (458)
Q Consensus 80 ~~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGS 159 (458)
.+ ++||++|++|+++|||++||||||||+++.+|.|+.||+|+||||++|++||||||||++||+|++++|+|||||||
T Consensus 97 ~p-~~DA~vV~rLr~AGAIilGKTN~~Efa~g~~g~n~~yG~t~NP~~~~~~~GGSSsGSAaAVAaG~~~~alGTDtgGS 175 (600)
T PRK08186 97 TP-ERDATVVARLRAAGAIVIGKTNLDQFATGLVGTRSPYGAVRNAFDPEYVSGGSSSGSAVAVALGLVSFALGTDTAGS 175 (600)
T ss_pred CC-CcChHHHHHHHHCCCEEEeeecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCcceEeeecCCCc
Confidence 44 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCC
Q 012667 160 VRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSIS 239 (458)
Q Consensus 160 iR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~ 239 (458)
||+||+||||||||||+|++|+.|++|+++++|++||||||++|+++++++|.++|+.|+.+...|. .. .....+
T Consensus 176 iRiPAa~cGlvGlKPT~G~vs~~Gv~p~~~slD~vGp~Arsv~D~~~~l~vl~g~d~~D~~s~~~p~-~~----~~~~~~ 250 (600)
T PRK08186 176 GRVPAAFNNIVGLKPTLGLLSTRGVVPACRTLDCVSVFALTVDDADAVLAVMAGFDPADPYSRANPA-DA----PAALPA 250 (600)
T ss_pred chhhhHHhCceEEeCCCCcccCCCcccccccCCceecccCCHHHHHHHHHHhcCCCCCCcccccCCc-cc----ccccCC
Confidence 9999999999999999999999999999999999999999999999999999999887765432221 00 112357
Q ss_pred CeEEEEeCCC--CcCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 012667 240 AIKLAKYDAW--FNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIE-VMRLAHYLTIGSECSTSLSSYLQKINCSDQG 316 (458)
Q Consensus 240 ~lrIgv~~~~--~~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 316 (458)
++|||++.+. ....+++++++++++++.|+++ |++|+++++|.+. .....+...+..|.+..+..+++. +.+.+.
T Consensus 251 ~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~v~ei~~~~~~~~~~~~~~~~~~ae~~~~~~~~~~~-~~~~~~ 328 (600)
T PRK08186 251 GPRVGVPRAAQLEFFGDAEAEAAFAAALARLEAL-GAELVEIDFSPFLEAARLLYEGPWVAERYAAVGEFLEA-HPDAVD 328 (600)
T ss_pred CCEEEEEcchhccccCCHHHHHHHHHHHHHHHHc-CCeEEEecchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-ChhhcC
Confidence 7999998532 1225899999999999999998 9999999987653 334455556667877777777765 456789
Q ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhccccccc
Q 012667 317 WDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIAGN 396 (458)
Q Consensus 317 ~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~N 396 (458)
+.++.++..+..++..+|.++++.|+.+++.++++|+++|+||+||+|.+++ +.+..... . .....+..||.++|
T Consensus 329 p~~~~~i~~g~~~sa~~~~~a~~~r~~l~~~~~~~~~~~D~Ll~Pt~p~~~~-~~~~~~~~--~--~~~~~~~~yT~~~N 403 (600)
T PRK08186 329 PVVRGIIAGAAAFSAADAFRALYRLAELRRAAEAVLAGIDALLVPTAPTHPT-IAEVAADP--I--GLNSRLGTYTNFVN 403 (600)
T ss_pred HHHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCC-chhhcCCc--h--hhhhhhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999864 33211111 0 11122335899999
Q ss_pred ccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhcccc
Q 012667 397 FLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISE 444 (458)
Q Consensus 397 l~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~ 444 (458)
++|+|+++||+|+..+|||+||||||++|+|+.||++|++||+.+++.
T Consensus 404 l~glPAisvP~g~~~~GlPvGvqlig~~~~D~~LL~~A~~le~~~~~~ 451 (600)
T PRK08186 404 LLDLCALAVPAGFRADGLPFGVTLIAPAFADQALADLAARLQAALALP 451 (600)
T ss_pred ccCCCeEEEecccCCCCCCeeEEEEcCCCCHHHHHHHHHHHHhhcccc
Confidence 999999999999988999999999999999999999999999998753
No 19
>PRK06529 amidase; Provisional
Probab=100.00 E-value=1.8e-96 Score=748.78 Aligned_cols=426 Identities=23% Similarity=0.301 Sum_probs=356.2
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeec-cCCCCccCCCCccccccC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDE-IDCSPYPTTGGTKWLHKV 79 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~-~~v~g~~tt~Gs~~~~~~ 79 (458)
||+++|++||++.| +.+|||+++++|+|+++|+++|. +| +|||||||+|||| |+|||++||+||..+.++
T Consensus 22 e~~~~~l~ri~~~~---~~lna~~~~~~e~al~~A~~~d~---~~---~PL~GvPi~vKD~~~~v~G~~tt~Gs~~~~~~ 92 (482)
T PRK06529 22 ELVTQAIYKAKKLN---PTLNAIVSERYEEALEEAKQRDF---SG---KPFAGVPIFLKDLGQELKGQLSTSGSRLFKNY 92 (482)
T ss_pred HHHHHHHHHHHHHC---CcccEEEecChHHHHHHHHhccc---cC---CCcCCCeEEEecCCcccCCCccCcchHHhcCC
Confidence 68999999999998 88999999999999999999995 23 5999999999998 799999999999888766
Q ss_pred CCCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCc
Q 012667 80 RPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGS 159 (458)
Q Consensus 80 ~~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGS 159 (458)
++++||++|++||++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+|||||||
T Consensus 93 -~~~~Da~vV~rLr~AGAiilGKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~~GGSSgGsAaaVAaG~~~~aiGtDtgGS 171 (482)
T PRK06529 93 -QATKTDLYVKRLEDLGFIILGRSNTPEFGFKNISDSSLHGPVNLPFDNSRNAGGSSGGAAALVSSGIVALAAASDGGGS 171 (482)
T ss_pred -CCCcchHHHHHHHHCCCeEEEecCchHhhcCCCCCCcCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceeeecCCCCC
Confidence 4579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccceeecCCCCcccCCCCCCCCCCCcee-ccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCC
Q 012667 160 VRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMV-GILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSI 238 (458)
Q Consensus 160 iR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~-Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~ 238 (458)
||+||+||||||||||+||+|..+..+.++++|++ |||||||+|+++++++|.++++.++.+...+. .+... ....
T Consensus 172 IRiPAa~cGvvGlKPT~Grvp~~~~~~~~~~~~~~~Gpiarsv~D~a~~l~~~~g~~~~~~~~~~~~~--~~~~~-~~~~ 248 (482)
T PRK06529 172 IRIPASFNGLIGLKPSRGRIPVGPGSYRGWQGASVHFALTKSVRDTRRLLYYLQMYQMESPFPLATLS--KESLF-QSLQ 248 (482)
T ss_pred eecChHhhCceeEccCCCccCCCCCCccccccccccCCccCcHHHHHHHHHHhhCCCCCCCcccCCcc--cchhc-cccC
Confidence 99999999999999999999987766556666765 79999999999999999998766543321110 00000 1125
Q ss_pred CCeEEEEeCCCC--cCCCHHHHHHHHHHHHHHHHhcCcEEEEee-CC-ChHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Q 012667 239 SAIKLAKYDAWF--NDCSDDIRVCCSRAVDKLCERYGWKVVEVT-IP-NIEVMRLAHYLTIGSECSTSLSSYLQKIN--- 311 (458)
Q Consensus 239 ~~lrIgv~~~~~--~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~-~p-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--- 311 (458)
+++|||++.+++ ..++++++++++++++.|+++ |++|++++ +| .+......++.+...|....+..+.+...
T Consensus 249 ~~lrIg~~~~~~~~~~~~p~v~~a~~~a~~~L~~~-G~~v~ev~~~p~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 327 (482)
T PRK06529 249 RPLKIAFYQRSPDGSPVSLDAAKALKQAVTFLREQ-GHEVVELEEFPLDMTEVMRSYYIMNSVETAAMFDDIEDALGRPM 327 (482)
T ss_pred CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 789999998653 348999999999999999998 99999996 45 45555556666666777666555432211
Q ss_pred -CCCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcC------------
Q 012667 312 -CSDQGWDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTG------------ 378 (458)
Q Consensus 312 -~~~~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~------------ 378 (458)
...+.+.++.++..+..++..+|.++++.|+++++.|.++|+++|+||+||++.+||+++.......
T Consensus 328 ~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 407 (482)
T PRK06529 328 TKDDMETMTWAIYQSGQDIPAKRYSQVLQKWDTYSATMASFHETYDLLLTFTTNTPAPKHGQLDPDSKLMANLAQAEIFS 407 (482)
T ss_pred ChhhcCHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCCccCcccchhhhcccccccc
Confidence 1235666666677788899999999999999999999999999999999999999999865211000
Q ss_pred --------cchhhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHh
Q 012667 379 --------ELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQAL 440 (458)
Q Consensus 379 --------~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~ 440 (458)
...+.....++.||.+||++|+|+++||+|++.+|||+||||+|++++|+.||++|++||++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlPvGlQlvg~~~~D~~lL~~a~~le~~ 477 (482)
T PRK06529 408 SEEQQNLVETMFEKSLAITPYTALANLTGQPAISLPTYETKEGLPMGVQLIAAKGREDLLLGIAEQFEAA 477 (482)
T ss_pred chhhhhhhhhhhhhhhhcccccccccccCCCeEEeecCcCCCCCceeEEEecCCCcHHHHHHHHHHHHhc
Confidence 00011112345689999999999999999998899999999999999999999999999986
No 20
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence. They are widespread, being found in both prokaryotes and eukaryotes. AS enzymes catalyse the hydrolysis of amide bonds (CO-NH2), although the family has diverged widely with regard to substrate specificity and function. Nonetheless, these enzymes maintain a core alpha/beta/alpha structure, where the topologies of the N- and C-terminal halves are similar. AS enzymes characteristically have a highly conserved C-terminal region rich in serine and glycine residues, but devoid of aspartic acid and histidine residues, therefore they differ from classical serine hydrolases. These enzymes posses a unique, highly conserved Ser-Ser-Lys catalytic triad used for amide hydrolysis, although the catalytic mechanism for acyl-enzyme intermediate formation can differ between enzymes []. Examples of AS enzymes include: Peptide amidase (Pam) [], which catalyses the hydrolysis of the C-terminal amide bond of peptides. Fatty acid amide hydrolases [], which hydrolyse fatty acid amid substrates (e.g. cannabinoid anandamide and sleep-inducing oleamide), thereby controlling the level and duration of signalling induced by this diverse class of lipid transmitters. Malonamidase E2 [], which catalyses the hydrolysis of malonamate into malonate and ammonia, and which is involved in the transport of fixed nitrogen from bacteroids to plant cells in symbiotic nitrogen metabolism. Subunit A of Glu-tRNA(Gln) amidotransferase [],a heterotrimeric enzyme that catalyses the formation of Gln-tRNA(Gln) by the transamidation of misacylated Glu-tRNA(Gln) via amidolysis of glutamine. ; GO: 0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; PDB: 1OCL_B 1OBK_A 1OBL_B 1OBJ_A 1OCM_B 1OCH_A 1OCK_B 1OBI_A 1O9Q_A 1O9N_B ....
Probab=100.00 E-value=1.2e-98 Score=764.79 Aligned_cols=425 Identities=35% Similarity=0.554 Sum_probs=347.5
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++| +.+||++++++++|+++|+++|+++++|+.++|||||||+|||+|+|+|++||+||..+.+.
T Consensus 1 e~~~~~~~ri~~~~---~~~na~~~~~~~~a~~~A~~~d~~~~~~~~~~pL~Gip~~vKD~~~~~g~~tt~G~~~~~~~- 76 (441)
T PF01425_consen 1 ELVEAYLARIEAYN---PELNAFVEVDFDEALAQARELDARRARGKPRGPLHGIPISVKDNIDVAGLPTTAGSPALADN- 76 (441)
T ss_dssp HHHHHHHHHHHHHH---HHH--EEEEEHHHHHHHHHHHHHHHHTTSSSSTTTT-EEEEETTBSBTTSBB-TTSGGGTTB-
T ss_pred CHHHHHHHHHHHhC---cccCEEEEECcHHHHHHHHHHHHHHhhcCCCCCCCCCceeccccccccccccccccccccCc-
Confidence 79999999999998 99999999999999999999999999999999999999999999999999999999988765
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++++|+++|++|+++|||++||||||||+++.++.|+.||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 77 ~~~~~a~~v~~L~~aGai~~gkt~~~e~~~~~~~~~~~~g~~~Np~~~~~~~GGSS~Gsaaavaag~~~~a~GtDtgGSi 156 (441)
T PF01425_consen 77 PPTEDAPVVQRLRAAGAIIIGKTNMPEFAMGPTTSNPLYGRTRNPWNPSRTPGGSSGGSAAAVAAGFVPLAIGTDTGGSI 156 (441)
T ss_dssp BBSSS-HHHHHHHHTT-EEEEEE--SGGGCSSSSTTTTTEE-EBTTBTTBE--SSSHHHHHHHHTTSSSEEEEEESSSTT
T ss_pred CcccccchhhheecccccceeeecccceeccccccccccccccCcccccccccccccccccccceecccccccccccccc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCC--CCcccccccCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLP--KVSFPLLKSATSI 238 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p--~~~~~~~~~~~~~ 238 (458)
|+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.++++.+..+...| ...+.. .....+
T Consensus 157 R~PAa~~Gv~GlkPT~G~vs~~G~~~~~~~~d~~GpmaRsv~Dl~~~l~vl~g~~~~d~~~~~~~~~~~~~~~-~~~~~~ 235 (441)
T PF01425_consen 157 RIPAAFCGVVGLKPTRGRVSRDGVFPLSPSFDTVGPMARSVEDLALLLDVLAGPDPWDPDSLPVPPPPPDFDA-PLPKSL 235 (441)
T ss_dssp HHHHHHHTSEEEE-STTSS--TTB-CSSTTT-EEEEEESSHHHHHHHHHHHBSCBTTBTTSCSTT--SS-CST-TTTSTT
T ss_pred cCchhccccceeccccccccccccccccccccccccccCcHHHHHHHHHHhcCCCccCCCccccccccccccc-cccccc
Confidence 99999999999999999999999999999999999999999999999999999998876655433 111111 124568
Q ss_pred CCeEEEEeCCCC--cCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHH------HHHHHhc
Q 012667 239 SAIKLAKYDAWF--NDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSL------SSYLQKI 310 (458)
Q Consensus 239 ~~lrIgv~~~~~--~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~------~~~~~~~ 310 (458)
+++||||+.+++ ..++++++++++++++.|+++ |++|+++++|.+.+....+..+...|...++ ..++...
T Consensus 236 ~~lrIGv~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 314 (441)
T PF01425_consen 236 KGLRIGVPRDDGQWVPVDPEVRRAFEEAAEALEAA-GAEVVEVDLPDLDEAMDAYYRIFVSEGAANLARYKDFARLLAKW 314 (441)
T ss_dssp TT-EEEEEGGGG-SSTSSHHHHHHHHHHHHHHHHT-T-EEEEE--TTGGHHHHHHHHHHHHHHHHHHTTTCSHHHHHHHH
T ss_pred cCccccccccccccccccHHHHHHHHHHHHhhccc-ccccccccCchHHHHHHHHhhhHHHHHHHHHhhhhHHHHhhhcc
Confidence 999999998876 458999999999999999999 9999999999888877767777777777652 3333322
Q ss_pred CCCCCCHHHHHHHHhccCC-----CHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhc-Ccchhhh
Q 012667 311 NCSDQGWDARVALSVYGSF-----SSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKT-GELDYIY 384 (458)
Q Consensus 311 ~~~~~~~~~~~~l~~~~~~-----s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~-~~~~~~~ 384 (458)
....+.+.++..+..+... ....|.++++.|.++++.+.++|+++|+||+|+++.++|+++...... ......+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~ 394 (441)
T PF01425_consen 315 RDPPLSPIVRSRLEQGAAISSAEDDSEYYLQAQRRRARLRRRFDELFEEYDALLTPTTPVPAPPIGEPSPLGPDYTALWN 394 (441)
T ss_dssp HHHHSHHHHHHHHHHHHHHHCTTTTTTHHHHHHHHHHHHHHHHHHHHHHSSEEEEESSSSS-BBTTTTCCCTSCHHHHHH
T ss_pred cccccccchhhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcCCCccccccccccchhhhhh
Confidence 2344666776666554322 233489999999999999999999999999999999999998643211 1112233
Q ss_pred hhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHH
Q 012667 385 GAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLM 431 (458)
Q Consensus 385 ~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll 431 (458)
...+..+|.++|++|+|+++||+|+..+|||+||||||++|+|++||
T Consensus 395 ~~~~~~~t~~~n~~g~PaisvP~g~~~~GlPvGvqlvg~~~~D~~LL 441 (441)
T PF01425_consen 395 LLDFTAYTSPANLAGLPAISVPVGFDPDGLPVGVQLVGRPGSDEKLL 441 (441)
T ss_dssp HHTTTTTTHHHHHHTHHEEEEEEEEETTTEEEEEEEEESTTBHHHHH
T ss_pred hhhhhccccccccccCcceeeecCCCCCCcCEeEEEECCCCCccCcC
Confidence 44556678999999999999999998899999999999999999997
No 21
>PRK07235 amidase; Provisional
Probab=100.00 E-value=6.7e-97 Score=750.55 Aligned_cols=431 Identities=25% Similarity=0.353 Sum_probs=361.1
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
|++++++++|+..+ +..|++.....|++...|.+.+.+ .+|+..||||||||+|||||+|+|++||+||..+.++
T Consensus 42 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~~-~~g~~~gpL~GvPiavKD~i~v~G~ptt~Gs~~~~~~- 116 (502)
T PRK07235 42 DRIDELPDEIPPVK---YPRTPGYRPEAEENPYGAWYVKTS-IKGAAEGKLAGKTVALKDNVAVAGVPMMNGSSTLEGF- 116 (502)
T ss_pred HHHHHHhhcccccC---CCcccccccCcccChhcChhhhhc-cCCCCCCCcCCceEEEecccccCCcccCccChhhcCC-
Confidence 57888889998887 889999999999999999988887 7899999999999999999999999999999988765
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++.+||++|++|+++|||++||||||||+++..+.|+.||+|+||||++|+|||||||||++||+|++++|+|||+||||
T Consensus 117 ~p~~DA~vV~rL~~AGAii~GKTn~~Ef~~~~~t~n~~~G~t~NP~~~~~~~GGSSgGsAAaVAaG~v~~aiGtDtGGSI 196 (502)
T PRK07235 117 VPSFDATVVTRLLDAGATIVGKATCEDLCFSGGSHTSDPGPVHNPRDPGYSAGGSSSGSAALVAAGEVDMAIGGDQGGSI 196 (502)
T ss_pred CCCCCHHHHHHHHHCCCEEEEEecchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCCCeEEecCCCCCc
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC-CcccccccCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK-VSFPLLKSATSIS 239 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~-~~~~~~~~~~~~~ 239 (458)
|+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|.|+|+.|+.+...+. .++... .....+
T Consensus 197 RiPAa~cGvvGlKPT~G~vp~~G~~~~~~sld~~Gpmarsv~D~a~ll~viag~d~~d~~~~~~~~~~~~~~~-l~~~~~ 275 (502)
T PRK07235 197 RIPSAWCGIYGMKPTHGLVPYTGAFPIERTIDHLGPMTATVRDNALLLEVIAGRDGLDPRQPAQPPVDDYTAA-LDRGVK 275 (502)
T ss_pred CccHHHcCcceecCCCcccCCCCCCCcccccCeeeceeCCHHHHHHHHHHHcCCCCCCccccccCCccchhHH-hccCCc
Confidence 999999999999999999999999999999999999999999999999999999887765443121 121110 123468
Q ss_pred CeEEEEeCCCCc--CCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHH-----------------
Q 012667 240 AIKLAKYDAWFN--DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECS----------------- 300 (458)
Q Consensus 240 ~lrIgv~~~~~~--~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~----------------- 300 (458)
++|||+..+++. .+++++.++++++++.|+++ |++|+++++|........+..+...+..
T Consensus 276 ~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~-G~~V~~v~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 354 (502)
T PRK07235 276 GLKIGILREGFGLPNSEPEVDEAVRAAAKRLEDL-GATVEEVSIPLHRLALAIWNPIATEGATAQMMLGNGYGFNWKGLY 354 (502)
T ss_pred CCEEEEeccccCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence 899999987543 38999999999999999998 9999999988654333333322211111
Q ss_pred -----HHHHHHHHhcCCCCCCHHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCccccc
Q 012667 301 -----TSLSSYLQKINCSDQGWDARVALSVYG----SFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIK 371 (458)
Q Consensus 301 -----~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~ 371 (458)
..+...... +...+.+.++.++..+. .++..+|.++++.|+++++.++++|+++|+||+||+|.+||+++
T Consensus 355 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~y~~a~~~r~~~~~~~~~~~~~~Dvll~Pt~p~~a~~~~ 433 (502)
T PRK07235 355 DTGLLDAFGAGWRE-RADDLSETVKLVMLLGQYGLERYHGRYYAKARNLARRLRAAYDEALRKYDLLVMPTTPMVATPLP 433 (502)
T ss_pred chhHHHHHhhhhhc-chhhcCHHHHHHHHhcccccccCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeeCCCCCCCCCcc
Confidence 111111111 33568899988887665 46788999999999999999999999999999999999999986
Q ss_pred chhhhcCcchhhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhc
Q 012667 372 DDALKTGELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALC 441 (458)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~ 441 (458)
...... .........++.||.+||++|+|+++||+|+. +|||+||||||++|+|+.||++|++||+..
T Consensus 434 ~~~~~~-~~~~~~~~~~~~~t~~~Nl~G~PalsvP~g~~-~GlPvGlQlvg~~~~D~~lL~~A~~~E~~~ 501 (502)
T PRK07235 434 APDASR-EEYVSRALEMIANTAPFDVTGHPAMSVPCGLV-DGLPVGLMLVGRHFDEATILRAAAAFEASG 501 (502)
T ss_pred cccCch-HHHHHHHHhhhccCccchhhCCCeEEEECCcC-CCCCeEEEEeCCCCCHHHHHHHHHHHHhhh
Confidence 521100 00011112244589999999999999999995 899999999999999999999999999864
No 22
>PRK07869 amidase; Provisional
Probab=100.00 E-value=4.7e-96 Score=743.77 Aligned_cols=420 Identities=24% Similarity=0.311 Sum_probs=338.9
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||++.| +.+|||+++++|+|+++|+++| +..||||||||+|||||||+|++||+||..+.+.
T Consensus 33 el~~~~l~ri~~~~---~~lna~~~~~~e~a~~~A~~~d------~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~- 102 (468)
T PRK07869 33 EVVEAAIARAEAVN---PALNALAYAAFDRARDRAARPG------SQGGFFSGVPTFIKDNVDVAGLPTMHGSDAWTPR- 102 (468)
T ss_pred HHHHHHHHHHHHhC---CCcCEEEEcCHHHHHHHHHhcC------CCCCCcCCCeEEEecCcccCCcccCcccHhhcCC-
Confidence 68999999999998 8999999999999999999987 2468999999999999999999999999877665
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++.+||++|++||++|||++||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+||||||||
T Consensus 103 ~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~d~~~~pGGSSgGsAaAVAaG~~~~alGTDtgGSi 182 (468)
T PRK07869 103 PAKADSDFARQFLATGLISLGKTQLPEFGFSASTEHPRLGPVRNPWNTDYSAGASSGGSAALVAAGVVPIAHANDGGGSI 182 (468)
T ss_pred CCCCcHHHHHHHHHCCCEEEEecCchHhhcCCCCCCCCCCCcCCCCCCCCCCCCCchHHHHHHHcCCCceeeecCCCCcc
Confidence 55799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCC-CCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPL-NWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSIS 239 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~-~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~ 239 (458)
|+|||||||||||||+|++|+.|+.|. ..++|++|||||||+|++++++++.++++.+. .. + ..... ....+
T Consensus 183 RiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~~d~~Gp~arsv~D~a~l~~v~~g~~~~~~--~~-~---~~~~~-~~~~~ 255 (468)
T PRK07869 183 RIPAACCGLVGLKPSRGRLPLDPELRRLPVNIVANGVLTRTVRDTAAFYREAERYYRNPK--LP-P---IGDVT-GPGKQ 255 (468)
T ss_pred ccchhhcCeeeecCCCCcccCCCCcccCccccceecCeeCcHHHHHHHHHHHhccCccCC--CC-c---hhhhc-ccCCC
Confidence 999999999999999999999998774 34789999999999999999999999764421 10 1 01111 12357
Q ss_pred CeEEEEeCCCCc--CCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCC
Q 012667 240 AIKLAKYDAWFN--DCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRL---AHYLTIGSECSTSLSSYLQKINCSD 314 (458)
Q Consensus 240 ~lrIgv~~~~~~--~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~---~~~~~~~~e~~~~~~~~~~~~~~~~ 314 (458)
++|||++.+++. .++++++++++++++.|+++ |++|+++++|..++... .+......+........ ....
T Consensus 256 ~lrigv~~~~~~~~~~~p~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 330 (468)
T PRK07869 256 RLRIAVVTDSVTGREADPEVREAVLATARLLEEL-GHRVEPVDLPVPASFVDDFLLYWGFLAFALVRGGRRT----FGPS 330 (468)
T ss_pred CCEEEEECCccCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEeCCCchHHHHHHHHHHHHHHHHHHHhhhhhh----cccc
Confidence 899999987653 48999999999999999998 99999998775332222 12212111111111111 1111
Q ss_pred CCHHH-----HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcC-cchhhhhhhh
Q 012667 315 QGWDA-----RVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTG-ELDYIYGAAL 388 (458)
Q Consensus 315 ~~~~~-----~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~-~~~~~~~~~~ 388 (458)
+.+.. ......+.. +..+|.++++.|+++++.+.++|+++|+||+||+|.++|+++....... .........+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~Dvll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~ 409 (468)
T PRK07869 331 FDRTRLDNLTLGLARHARR-NLHRLPLAIARLRRLRRVYARFFGTYDVVLTPTLAHTTPEIGYLDPTQDFDTVLDRLISY 409 (468)
T ss_pred cCHHHhhHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCCCCCCCccCccccchhhhHHHhcc
Confidence 22222 222222222 4557888888899999999999999999999999999999865211100 0000111233
Q ss_pred hcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccc
Q 012667 389 VRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCIS 443 (458)
Q Consensus 389 ~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~ 443 (458)
..||.+||++|+|+++||+|++.+|||+||||+|++++|+.||++|++||+..+|
T Consensus 410 ~~~t~~~nl~G~PaisvP~g~~~~GlPvGlQivg~~~~D~~lL~~A~~le~~~~~ 464 (468)
T PRK07869 410 VAFTPLQNATGEPAISLPLGQSSDGLPVGMMFSADVGDEATLLELAYELEEAQPW 464 (468)
T ss_pred cccCccccccCCCceeeecCcCCCCCCeeEEEecCCCchHHHHHHHHHHHhcCCC
Confidence 4589999999999999999998899999999999999999999999999998765
No 23
>PRK06828 amidase; Provisional
Probab=100.00 E-value=1.2e-94 Score=730.20 Aligned_cols=416 Identities=25% Similarity=0.364 Sum_probs=349.5
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCC-ccCCCCccccccC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSP-YPTTGGTKWLHKV 79 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g-~~tt~Gs~~~~~~ 79 (458)
||+++|++||+++|..++.+|+|++++++ ++++|+++|+++++|+++||||||||+|||+|+|+| ++||+||..+.+.
T Consensus 31 el~~~~l~ri~~~~~~~~~lna~~~~~~~-al~~A~~~d~~~~~g~~~gpL~GvPv~vKD~~~v~gg~~tt~Gs~~~~~~ 109 (491)
T PRK06828 31 ELVMYYLHRIAKYDQDGPKINSILEINPD-AIFIAEALDHERKIKGVRGPLHGIPVLLKDNIETNDSMHTSAGTIALEQH 109 (491)
T ss_pred HHHHHHHHHHHHhCCCCCeeEEEEecCHH-HHHHHHHHHHHHhcCCCCCCccCceeeeeeeEEecCCCcCCcCcHHHcCC
Confidence 68999999999998655689999999987 899999999999999999999999999999999996 9999999887765
Q ss_pred CCCCCCHHHHHHHHHcCCeEEEeccccccccC-----CCCCCCCCCCCCCCCCC---CCCCCCCchHHHHHHHhCCccce
Q 012667 80 RPCTGDACCVMRLRLCGAILVGKTNMHELGAG-----TSGINPHYGVARNPYDP---SKITGGSSSGSAAVVAAGLCPVA 151 (458)
Q Consensus 80 ~~~~~da~~v~~L~~aGai~~gkt~~~e~~~~-----~~~~n~~~G~~~NP~~~---~~~~GGSSgGsaaava~g~~~~a 151 (458)
++.+|+++|++||++|||++||||||||+++ .+|.|++||+|+||||+ +|+|||||||||++||+|+++++
T Consensus 110 -~~~~da~vV~~Lr~aGaii~GKTn~~Efa~~~~~~~~~g~n~~~G~t~NP~d~~~~~r~pGGSSgGsAaaVAag~~~~a 188 (491)
T PRK06828 110 -ISSEDAFLVTKLREAGAVILGKANMTELANFMSFEMWAGYSARGGQTINPYGTGEDDMFVGGSSTGSAIAVAANFTVVS 188 (491)
T ss_pred -CCCCChHHHHHHHHCCCEEEeecChHHHhhccCCCCCCCcCCCCCCcCCCCCCccCCcCCCcCchHHHHHHHcCCCceE
Confidence 4579999999999999999999999999975 58999999999999999 68999999999999999999999
Q ss_pred eeccCCCccccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC---Cc
Q 012667 152 LGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK---VS 228 (458)
Q Consensus 152 ~gtD~gGSiR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~---~~ 228 (458)
+|||||||||+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.|+|+.|..+...+. .+
T Consensus 189 iGtDtgGSiRiPAa~cGvvGlKPT~G~vs~~G~~p~~~s~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~~~~~~~~~~~~ 268 (491)
T PRK06828 189 VGTETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTGVDEKDVVTHKSEGIAEHD 268 (491)
T ss_pred eecCCCCccccchhhcCceeecCCCCCccCCCCCCCccCCCeeccccCCHHHHHHHHHHHhCCCccCccccccCcCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999887765432211 11
Q ss_pred ccccccCCCCCCeEEEEeCC----CCcCCCHHHHHHHHHHHHHHHHhcCcEEEE-eeCCChHHHHHHHHHHHHHHHHHHH
Q 012667 229 FPLLKSATSISAIKLAKYDA----WFNDCSDDIRVCCSRAVDKLCERYGWKVVE-VTIPNIEVMRLAHYLTIGSECSTSL 303 (458)
Q Consensus 229 ~~~~~~~~~~~~lrIgv~~~----~~~~~~~~v~~a~~~a~~~L~~~~G~~Vv~-~~~p~~~~~~~~~~~~~~~e~~~~~ 303 (458)
+........++++||||+.+ ++ .++++++++++++++.|+++ |++|++ +++|.+... .+..+...|+..++
T Consensus 269 ~~~~~~~~~~~~lrigv~~~~~~~~~-~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~p~~~~~--~~~~~~~~e~~~~~ 344 (491)
T PRK06828 269 YTKYLDANGLNGAKIGVYNNAPKEYY-ESGEYDEKLFKETIEVLRSE-GATVVEDIDIPSFHRE--WSWGVLLYELKHSL 344 (491)
T ss_pred hhhhhccccCCCCEEEEEcCcccccc-CCCHHHHHHHHHHHHHHHhc-CCEEEecccCccchhH--HHHHHHHHHHHHHH
Confidence 11100112478999999643 22 47999999999999999998 999998 777764332 22233455666555
Q ss_pred HHHHHhc---------------------CCCCCCHHH-HHHHHhccCCCHHHHHHHHHHHHHHH--HHHHHHhc--cCCE
Q 012667 304 SSYLQKI---------------------NCSDQGWDA-RVALSVYGSFSSQEYIKAQKIRNHQM--QIHRNVFA--KADV 357 (458)
Q Consensus 304 ~~~~~~~---------------------~~~~~~~~~-~~~l~~~~~~s~~~y~~a~~~r~~~~--~~~~~~f~--~~D~ 357 (458)
..++... +...+++.+ +..+..+..++..+|.++++.|+.+. +.++++|+ ++|+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~~a~~~r~~~~~~~~~~~~~~~~~~D~ 424 (491)
T PRK06828 345 DNYLSKLPSTIPVHSISELMEFNENIAERALKYGQTKLERRKDFPNTLRNPEYLNARLEDIYFSQEQGIDFALEKYNLDA 424 (491)
T ss_pred HHHHHhcCCCCCCCCHHHHHHHhhhchhhhhccCHHHHHHHHhcCCCCChHHHHHHHHHHHHhhhHHHHHHHHHhcCCCE
Confidence 5543211 112456643 34566777889999999998887754 68999998 4899
Q ss_pred EEccCCCCCcccccchhhhcCcchhhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHH
Q 012667 358 IVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAM 437 (458)
Q Consensus 358 ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~l 437 (458)
||+||++.. .++|++|+|+++||+|++.+|||+||||+|++|+|..||++|++|
T Consensus 425 ll~Pt~~~~--------------------------~~~~~~GlPaisvP~G~~~~GlPvGlQlig~~~~D~~LL~~A~a~ 478 (491)
T PRK06828 425 ILFPSYIGS--------------------------TICAKAGYPSIAIPAGYMEGGRPFGITLASTAFSEGTLIKLAYAF 478 (491)
T ss_pred EEeCCCCcc--------------------------cchhhcCCCeEEeecCCCCCCcCeEEEEECCCCCHHHHHHHHHHH
Confidence 999998752 235799999999999998889999999999999999999999999
Q ss_pred HHhccccCCCCc
Q 012667 438 QALCISEFRKPK 449 (458)
Q Consensus 438 E~~~~~~~~~p~ 449 (458)
|+... .++.|.
T Consensus 479 E~~~~-~r~~P~ 489 (491)
T PRK06828 479 EQATK-HRKIPG 489 (491)
T ss_pred HHhCC-CCCCCC
Confidence 99975 356664
No 24
>TIGR02713 allophanate_hyd allophanate hydrolase. Allophanate hydrolase catalyzes the second reaction in an ATP-dependent two-step degradation of urea to ammonia and C02, following the action of the biotin-containing urea carboxylase. The yeast enzyme, a fusion of allophanate hydrolase to urea carboxylase, is designated urea amidolyase.
Probab=100.00 E-value=4.1e-94 Score=733.36 Aligned_cols=408 Identities=32% Similarity=0.398 Sum_probs=351.9
Q ss_pred eEEEecC-HHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCCCCCCCHHHHHHHHHcCCeE
Q 012667 21 SFFINYN-EEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAIL 99 (458)
Q Consensus 21 na~~~~~-~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~~~~~da~~v~~L~~aGai~ 99 (458)
|+|+++. .|+++++|+++|++++++. .+|||||||+|||||||+|++||+||+.+. + .+++||++|++||++|||+
T Consensus 2 ~a~i~~~~~e~al~~A~~ld~~~~~~~-~~PL~GvP~aVKD~idvaG~pTTaGs~~~~-~-~p~~DA~vV~rLr~AGAIi 78 (561)
T TIGR02713 2 EAWISLLSEEDLLAQAAALDARDARPE-RLPLYGVPFAVKDNIDVAGLPTTAACPAFA-Y-TPEEDATVVALLRAAGAIV 78 (561)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHHhcCC-CCCccCCeEEEEcccccCCCccCcCCHhHc-C-CCCcCHHHHHHHHHCCCEE
Confidence 7899985 5899999999999988776 489999999999999999999999998774 4 4479999999999999999
Q ss_pred EEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCccccccccccceeecCCCCcc
Q 012667 100 VGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRI 179 (458)
Q Consensus 100 ~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSiR~PAa~~Gv~G~kPt~g~~ 179 (458)
+||||||||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+|||||||||+||+||||||||||+|++
T Consensus 79 iGKTN~~Efa~g~~g~n~~~G~t~NP~d~~~~~GGSSsGSAaAVAaG~v~~alGTDtgGSiRiPAa~cGlvGlKPT~G~v 158 (561)
T TIGR02713 79 VGKTNLDQFATGLVGTRSPYGAVRNAFDPAYISGGSSSGSAVAVARGLVPFALGTDTAGSGRVPAALNNIVGLKPTKGLV 158 (561)
T ss_pred EEEeCchHhhcCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHcCCCceEEeecCCCcchhhhHHhCceeEecCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCCeEEEEeCC--CCcCCCHHH
Q 012667 180 PLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDA--WFNDCSDDI 257 (458)
Q Consensus 180 s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~lrIgv~~~--~~~~~~~~v 257 (458)
|+.|++|+++++|++|||||||+|+++++++|.++|+.|+.+...|. .......+++||||+.+ +....++++
T Consensus 159 s~~Gv~p~~~slD~vG~~Arsv~D~~~~l~v~~g~d~~d~~s~~~p~-----~~~~~~~~~lrigv~~~~~~~~~~~~~v 233 (561)
T TIGR02713 159 STTGVVPACRSLDCVSIFALTVADAEQVLRIAAAPDARDPYSRPLPA-----AALRRLPPPPRVGVPRAAQLEFFGDSQA 233 (561)
T ss_pred cCCCccccccCCCeeechhCCHHHHHHHHHhhcCCCCcCccccCCCc-----hhhcccCCCCEEEEECchhcCCCCCHHH
Confidence 99999999999999999999999999999999999887765432221 00012246799999873 222258899
Q ss_pred HHHHHHHHHHHHHhcCcEEEEeeCCCh-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhccCCCHHHHHH
Q 012667 258 RVCCSRAVDKLCERYGWKVVEVTIPNI-EVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEYIK 336 (458)
Q Consensus 258 ~~a~~~a~~~L~~~~G~~Vv~~~~p~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~y~~ 336 (458)
+++++++++.|+++ |++|++++++.+ +.....+...+..|.+..+..+++. +.+.+.|.++..+..+..++..+|.+
T Consensus 234 ~~a~~~a~~~L~~~-G~~v~~v~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~-~~~~~~p~~~~~l~~g~~~sa~~~~~ 311 (561)
T TIGR02713 234 EAAFAAAVERLEAL-GVEVVEIDFAPFLETAALLYEGPWVAERYAAVGEFVEA-QPDALDPVVRGIITSATRFSAADAFA 311 (561)
T ss_pred HHHHHHHHHHHHHC-CCEEEEecchhHHHHHHHHHHHHHHHHHHHHHHHHHhh-ChhhcCHHHHHHHHhccCCCHHHHHH
Confidence 99999999999998 999999998764 3333345555567777777777765 55678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhcccccccccCCCeEEEecccCCCCCce
Q 012667 337 AQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPI 416 (458)
Q Consensus 337 a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPv 416 (458)
+++.|+++++.++++|+++|+||+||+|.+++ +.+... ... .....+..||.++|++|+|+++||+|+..+|||+
T Consensus 312 a~~~r~~l~~~~~~~~~~~DvLl~Pt~p~~~~-~~~~~~--~~~--~~~~~~~~yT~~~Nl~glPAisvP~g~~~~GlPv 386 (561)
T TIGR02713 312 AQYRLAALRRKAEALLAGVDVLLVPTAPTHPT-IEEVLA--DPV--GLNSRLGTYTNFVNLLDLCAVAVPAGFRSDGLPF 386 (561)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCC-chhccC--Cch--hhhhhhhcccccccccCCceEEeecccCCCCCCE
Confidence 99999999999999999999999999999864 332111 111 1112234589999999999999999998899999
Q ss_pred EEEEEcCCCChHHHHHHHHHHHHhccc
Q 012667 417 GLQFIGKPWSEPTLMHIAFAMQALCIS 443 (458)
Q Consensus 417 GlQlvg~~~~D~~ll~~a~~lE~~~~~ 443 (458)
||||+|++++|+.||++|++||++..+
T Consensus 387 Gvqlig~~~~D~~LL~~A~~le~~~~~ 413 (561)
T TIGR02713 387 GVTLIGPAFHDAALASLGRRLQAASAL 413 (561)
T ss_pred EEEEEcCCCChHHHHHHHHHHHhccCc
Confidence 999999999999999999999998654
No 25
>PRK11910 amidase; Provisional
Probab=100.00 E-value=7e-92 Score=710.67 Aligned_cols=401 Identities=23% Similarity=0.356 Sum_probs=334.2
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
||+++|++||+++|..++.+|||++++++ |+++|+++|++++++ .||||||||+|||||+++|++||+||..+.+..
T Consensus 183 elv~a~L~RI~~~n~~g~~LnA~i~~~~~-Al~~A~~lD~~~~~~--~gPL~GIPv~VKDni~t~G~pTTaGS~al~~~~ 259 (615)
T PRK11910 183 ELAGIYLNRIKKYDQNGLNLNAITEINPT-IIAEAEQLDKENTTN--KSALYGMPVLLKDNIGTKELPTSAGTVALKDWV 259 (615)
T ss_pred HHHHHHHHHHHHhCCCCCceeEEEEcCHH-HHHHHHHHHHHhccC--CCCcCCCEEEEEcCcccCCCccCcccHhhcCCC
Confidence 58999999999999555689999999986 999999999986665 489999999999999999999999998887764
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccC-----CCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeecc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAG-----TSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVD 155 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~-----~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD 155 (458)
+.+||++|++||++|||++|||||+||+++ .+++|++||+|+|||+++|+|||||||||++||+|++++|+|||
T Consensus 260 -p~~DA~vV~rLr~AGAIIlGKTNm~EfA~~~~~~~~~g~s~~~G~t~NP~~~~r~pGGSSsGSAAAVAaG~a~~AiGTD 338 (615)
T PRK11910 260 -IGKDATIVENLKANGALILGKTNMSEWAAGMDEDLPNGYSGKKGQSKNPYSSNLDPSGSSSGSATAATSDFAAIAIGTE 338 (615)
T ss_pred -CCCCHHHHHHHHHCCCEEEEEeCcchhhhCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCchHHHHHhcCCceEEeecC
Confidence 579999999999999999999999999977 45789999999999999999999999999999999999999999
Q ss_pred CCCccccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccC
Q 012667 156 GGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSA 235 (458)
Q Consensus 156 ~gGSiR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~ 235 (458)
||||||+||+||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.+.+..++ +. .
T Consensus 339 TgGSIR~PAa~cGvVGlKPT~G~vSr~GviPls~slDtvGPmaRsV~D~a~ll~vi~g~~~~~~---------l~----~ 405 (615)
T PRK11910 339 TNGSIITPASAQSAVGYKPSQGLVNNKGIIPLSSRFDTPGPLTRTVNDAYLTTNALTNTTSNPP---------LS----T 405 (615)
T ss_pred CCCccccchHHcCceeEecCCCCCCCCCCcCCcCCCCeeccccCCHHHHHHHHHHhcCCCCcCc---------cC----c
Confidence 9999999999999999999999999999999999999999999999999999999998643221 11 2
Q ss_pred CCCCCeEEEEeCCCCcCCCHHHHHHHHHHHHHHHHhcCcEEEE-eeCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012667 236 TSISAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVE-VTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINCSD 314 (458)
Q Consensus 236 ~~~~~lrIgv~~~~~~~~~~~v~~a~~~a~~~L~~~~G~~Vv~-~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 314 (458)
..++++|||++.+ ..++++.++++++++.|+++ |++|++ +++|.++.....+..++..|+..++..|+... ...
T Consensus 406 ~~lkglRIGv~~~---~~~~~v~~a~~~a~~~L~~~-Ga~Vve~~~~p~~~~~~~~~~~l~~~E~~~~l~~yl~~~-~~~ 480 (615)
T PRK11910 406 DALKGKRIGLLAD---GESNEETAVIKKIKLDLQKA-GATIIEGIAVGEFEQKDTDYASLLNADFKHDLNQFLQVN-HSP 480 (615)
T ss_pred ccCCCCEEEEECC---CCCHHHHHHHHHHHHHHHHC-CCEEEeCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 3578899999864 35789999999999999998 999998 66776766666777788899999999887431 111
Q ss_pred CCH--HHH----------------HHHHhcc-CCCHHHH-HHHHHHHHHHHHHHHHHhc--cCCEEEccCCCCCcccccc
Q 012667 315 QGW--DAR----------------VALSVYG-SFSSQEY-IKAQKIRNHQMQIHRNVFA--KADVIVVPTTGVTAYEIKD 372 (458)
Q Consensus 315 ~~~--~~~----------------~~l~~~~-~~s~~~y-~~a~~~r~~~~~~~~~~f~--~~D~ll~Pt~~~~a~~~~~ 372 (458)
+.. ++. ..+..+. ..+..++ ..+++.|+.+++.++++|+ ++|+||+|+...
T Consensus 481 v~sL~dl~~fn~~~~~~~~~~gq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lDalv~P~~~~------- 553 (615)
T PRK11910 481 MSTLESIIQFNQTNPTRNMKYGQSELVKSQQSTITKQQADNLASNLIQSSQNELDSVLQKDKLDAVVTIGMGG------- 553 (615)
T ss_pred CCCHHHHHHHHhcCcccccCcCHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCcEEEeCCCCC-------
Confidence 111 010 1111122 2343332 2355666677788888995 899999997311
Q ss_pred hhhhcCcchhhhhhhhhcccccccccCCCeEEEecccCC-CCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCC
Q 012667 373 DALKTGELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDT-AGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKP 448 (458)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~-~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p 448 (458)
. .....+++|+|+|+||+|++. +|||+||||+|++|+|+.||++|++||++++ .++.|
T Consensus 554 ------~-----------~~~~~~~aG~PaItVP~G~~~~~GlPvGlqliG~~~sE~~LL~~A~a~Eq~t~-~r~~P 612 (615)
T PRK11910 554 ------S-----------VMFLAPIAGNPELTIPAGYDEESNQPISLTFITARNSDKILLNMGYAYEQQSK-NRKSP 612 (615)
T ss_pred ------c-----------chhhhhhcCCCeEEecccCCCCCCcCeEEEEECCCCCHHHHHHHHHHHHHhcC-CCCCC
Confidence 0 012245899999999999986 7999999999999999999999999999986 34444
No 26
>PRK06707 amidase; Provisional
Probab=100.00 E-value=1.6e-91 Score=710.66 Aligned_cols=413 Identities=25% Similarity=0.383 Sum_probs=343.3
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCC-CCccCCCCccccccC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDC-SPYPTTGGTKWLHKV 79 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v-~g~~tt~Gs~~~~~~ 79 (458)
||+++|++||+++|..++.+|+|++++++ |+++|+++|+++++|. .+|||||||+|||||++ +|++||+||..+.+.
T Consensus 89 el~~~~l~ri~~~~~~~~~lna~~~~~~~-al~~A~~~d~~~~~~~-~~pL~GiPi~vKD~i~~~~g~~TtaGs~~l~~~ 166 (536)
T PRK06707 89 ELTSIYLFRIQEHDQNGITLNSVTEINPN-AMEEARKLDQERSRNK-KSNLYGIPVVVKDNVQTAKVMPTSAGTYVLKDW 166 (536)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEECCHH-HHHHHHHHHHHHhcCC-CCCcCCCeEEEecccccCCCCccCcccHhhccC
Confidence 68999999999998655689999999986 9999999999888776 48999999999999999 999999999888776
Q ss_pred CCCCCCHHHHHHHHHcCCeEEEeccccccccC-----CCCCCCCCCCCCCCCCC-CCCCCCCchHHHHHHHhCCccceee
Q 012667 80 RPCTGDACCVMRLRLCGAILVGKTNMHELGAG-----TSGINPHYGVARNPYDP-SKITGGSSSGSAAVVAAGLCPVALG 153 (458)
Q Consensus 80 ~~~~~da~~v~~L~~aGai~~gkt~~~e~~~~-----~~~~n~~~G~~~NP~~~-~~~~GGSSgGsaaava~g~~~~a~g 153 (458)
. +.+||++|++||++|||++|||||+||++. .+|+|++||+|+||||+ .++|||||||||++||+|++++++|
T Consensus 167 ~-~~~DA~vV~rLr~AGAiilGKtnm~E~a~~~~~~~~~g~s~~~G~t~NP~~~~~~~pGGSSsGSAaAVAag~~~~aiG 245 (536)
T PRK06707 167 I-ADQDATIVKQLKEEGAFVLGKANMSEWANYLSFTMPSGYSGKKGQNLNPYGPIKFDTSGSSSGSATVVAADFAPLAVG 245 (536)
T ss_pred C-CCCChHHHHHHHHCCCEEEEecCchhhhccCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCchHHHHHhCCCCceEEe
Confidence 5 479999999999999999999999999963 67889999999999999 6899999999999999999999999
Q ss_pred ccCCCccccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC---Cccc
Q 012667 154 VDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK---VSFP 230 (458)
Q Consensus 154 tD~gGSiR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~---~~~~ 230 (458)
||||||||+||++|||||||||+|++|+.|++|+++++|++|||+|||+|+++++++|.|+|+.|..+...|. .++.
T Consensus 246 tDtgGSIr~PAs~~GvvGlKPT~G~vs~~Gv~p~s~slDt~Gp~artV~D~a~~l~~~~g~d~~d~~~~~~~~~~~~~~~ 325 (536)
T PRK06707 246 TETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYDEKDVMTEKVKDKERIDYT 325 (536)
T ss_pred cCCCCcccccHHHcCeEEEeCCCCcccCCCCcCcccccCeecCeeCCHHHHHHHHHHHcCCCCCccccccccccCCcchh
Confidence 9999999999999999999999999999999999999999999999999999999999999988866543221 1111
Q ss_pred ccccCCCCCCeEEEEeCCCCcCCCHHHHHH-HHHHHHHHHHhcCcEEEE-eeCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 012667 231 LLKSATSISAIKLAKYDAWFNDCSDDIRVC-CSRAVDKLCERYGWKVVE-VTIPNIEVMRLAHYLTIGSECSTSLSSYLQ 308 (458)
Q Consensus 231 ~~~~~~~~~~lrIgv~~~~~~~~~~~v~~a-~~~a~~~L~~~~G~~Vv~-~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~ 308 (458)
.......++++|||++.++. .++++.++ ++++++.|+++ |++|++ +++|.... .+..++..|+..++..|+.
T Consensus 326 ~~l~~~~l~~~rigv~~~~~--~~~~~~~a~~~~a~~~L~~~-Ga~iv~~~~l~~~~~---~~~~~~~~e~~~~l~~y~~ 399 (536)
T PRK06707 326 KDLSIDGLKGKKIGLLFSVD--QQDENRKAVAEKIRKDLQDA-GAILTDYIQLNNGGV---DNLQTLEYEFKHNVNDYFS 399 (536)
T ss_pred hhccccCCCCCEEEEECCcC--CCHHHHHHHHHHHHHHHHHc-CCEEEeccCCchhhH---HHHHHHHHHHHHHHHHHHh
Confidence 11112357899999987653 57888888 59999999998 999999 88774221 2344556888888887764
Q ss_pred hcCCCC---------C-CHHHHHHHHhccCC---------CHHHH-HHHHHHHHHHHHHHHHHhc--cCCEEEccCCCCC
Q 012667 309 KINCSD---------Q-GWDARVALSVYGSF---------SSQEY-IKAQKIRNHQMQIHRNVFA--KADVIVVPTTGVT 366 (458)
Q Consensus 309 ~~~~~~---------~-~~~~~~~l~~~~~~---------s~~~y-~~a~~~r~~~~~~~~~~f~--~~D~ll~Pt~~~~ 366 (458)
...... + .++++.++..++.+ +..+| ..+++.|+.+++.++++|+ ++|+|++|..
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~Dall~p~~--- 476 (536)
T PRK06707 400 QQKNVPVKSLEEIIAFNKKDSKRRIKYGQTLIEASEKSAITKDEFEKVVQTSQENAKKELDRYLVEKGLDALVMINN--- 476 (536)
T ss_pred hhcCCCCCCHHHHHHhcCHHHHHHHHccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEecCC---
Confidence 311110 2 24555555555432 22333 3456677788889999998 8999999821
Q ss_pred cccccchhhhcCcchhhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCC
Q 012667 367 AYEIKDDALKTGELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFR 446 (458)
Q Consensus 367 a~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~ 446 (458)
..|.++|++|+|+||||+|++.+|+|+||||+|++|+|..||++|++||+..+ .++
T Consensus 477 -----------------------~~t~~an~aG~PaitvP~G~~~~GlP~Glqlig~~~~e~~LL~~A~~~E~~~~-~r~ 532 (536)
T PRK06707 477 -----------------------EEVLLSAVAGYPELAVPAGYDNNGEPVGAVFVGKQFGEKELFNIGYAYEQQSK-NRK 532 (536)
T ss_pred -----------------------CcchhhHhcCCCeEEEecccCCCCCCeEEEEECCCCChHHHHHHHHHHHHhCc-CCC
Confidence 02567899999999999999889999999999999999999999999999985 466
Q ss_pred CCc
Q 012667 447 KPK 449 (458)
Q Consensus 447 ~p~ 449 (458)
.|+
T Consensus 533 ~p~ 535 (536)
T PRK06707 533 PPK 535 (536)
T ss_pred CCC
Confidence 664
No 27
>PRK07139 amidase; Provisional
Probab=100.00 E-value=7.6e-91 Score=697.38 Aligned_cols=403 Identities=24% Similarity=0.357 Sum_probs=330.2
Q ss_pred HHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCCCC
Q 012667 3 AERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPC 82 (458)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~~~ 82 (458)
.++++++++. ..+|+++++..|.. ...||||||||+|||+|+|+|++||+||..+.++. +
T Consensus 8 ~~~~~~~~~~-----~~~~~~~~~~~~~~--------------~~~gpL~GvPvavKD~~~v~G~~tt~Gs~~l~~~~-~ 67 (439)
T PRK07139 8 FQKALEELKN-----DKNNAVSYVFDEKN--------------NKDGPLANCVFTIKDNFATSEGPTHASSKSLENFK-P 67 (439)
T ss_pred HHHHHHHhhc-----cccCeEEEEecccC--------------CCCCCcCCcEEEEEcceecCCCccCcChHHHccCC-C
Confidence 3444444444 45899999865532 24689999999999999999999999998887665 4
Q ss_pred CCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcccc
Q 012667 83 TGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRM 162 (458)
Q Consensus 83 ~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSiR~ 162 (458)
.+||++|++|+++|||++||||||||+++.++.|++||+|+||||++|+|||||||||++||++ +++|+|||||||||+
T Consensus 68 ~~dA~vV~rLr~AGAIilGKTn~~Efa~~~~~~n~~~G~t~NP~~~~~~pGGSSgGSAAaVAag-~~~alGtDtgGSIRi 146 (439)
T PRK07139 68 SYNATVVQKLINAGAKPVAKVHCDELGLGGTGLFSAFGLIKNPLDSSKLVGGSSSGSAATFNKN-ISFAIGSDTGDSVRL 146 (439)
T ss_pred CCchHHHHHHHHCCCEEEEeechhhHhcCCCCCCCCCCCcCCCCCCCCCCCCCchHHHHHHHCC-CCEEEEcCCCcchhh
Confidence 7999999999999999999999999999999999999999999999999999999999999987 699999999999999
Q ss_pred ccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCCeE
Q 012667 163 PAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIK 242 (458)
Q Consensus 163 PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~lr 242 (458)
|||||||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.++|+.|+.+...+. +. ...++++|
T Consensus 147 PAa~cGvvGlKPT~G~vs~~G~~p~~~sld~~Gp~arsv~D~a~~~~vl~g~d~~d~~~~~~~~---~~---~~~~~~lr 220 (439)
T PRK07139 147 PASFIGKVGFKPSYGAISRYGLFAYASSLDTVAYFTHNVNDAIILSKVLFGKDENDLTSVDVKI---NN---VKKTKPKK 220 (439)
T ss_pred hHHHcCeEEEeCCCCCcCCCCcccCcccCCccccccCCHHHHHHHHHHHcCCCcCCccccccCc---cc---ccccCCCE
Confidence 9999999999999999999999999999999999999999999999999998877655432111 11 23467899
Q ss_pred EEEeCCCCcCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCC--hHHHHHHHHHHHHHHHHHHHHH---------------
Q 012667 243 LAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPN--IEVMRLAHYLTIGSECSTSLSS--------------- 305 (458)
Q Consensus 243 Igv~~~~~~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~--~~~~~~~~~~~~~~e~~~~~~~--------------- 305 (458)
||+... +..++++++++++++++.|+++ |++|+++++|. +......+..+...|...++.+
T Consensus 221 ig~~~~-~~~~~~~v~~a~~~a~~~L~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 298 (439)
T PRK07139 221 VAYLDC-FKELEEYVAKKYKKLINILKSE-NIEVEKIKIDEKLLKAIKPVYKIISYSEASSNLANLNGIAFGNREKGSSW 298 (439)
T ss_pred EEEECc-cccCCHHHHHHHHHHHHHHHHC-CCEEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccH
Confidence 999753 3348999999999999999998 99999998773 2222223333333444433322
Q ss_pred --HHHhcCCCCCCHHHHHHHHhccCCCH-----HHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcC
Q 012667 306 --YLQKINCSDQGWDARVALSVYGSFSS-----QEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTG 378 (458)
Q Consensus 306 --~~~~~~~~~~~~~~~~~l~~~~~~s~-----~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~ 378 (458)
++...+...+++.++.++..+..++. .+|.++++.|+++++.++++|+++|+||+||++.+||++++....
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~ap~~~~~~~~-- 376 (439)
T PRK07139 299 EEIMINTRSEGFGKMVQKRLILGSYFLEEENQEKYFLKAKKVRRVIKNYYESIHNKFDIVIYPAYADIAPDIDENENK-- 376 (439)
T ss_pred HHHHHhcchhccCHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHhcCCEEEeCCCCCCCCcccccccc--
Confidence 22222334578888888888776654 458899999999999999999999999999999999998652110
Q ss_pred cchhhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHHhcc
Q 012667 379 ELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQALCI 442 (458)
Q Consensus 379 ~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~ 442 (458)
. ..... .+|.++|++|+|+|+||+| ..+|||+||||+|++++|..||++|+++|+.++
T Consensus 377 -~--~~~~~--~~t~~~nl~G~PaisvP~g-~~~glPiGlqivg~~~~D~~LL~~A~~lE~~~~ 434 (439)
T PRK07139 377 -S--DNYMD--YILTISNLVGNPSLSIPLG-KYNNLPFNLAIDSKIYDDEKLLSYSLYIEELIK 434 (439)
T ss_pred -h--hhhhh--hcccCcccCCCCeEEEeCC-CCCCCCeEEEEECCCCChHHHHHHHHHHHHHhc
Confidence 0 01111 1478899999999999999 578999999999999999999999999999875
No 28
>PRK08310 amidase; Provisional
Probab=100.00 E-value=6e-91 Score=690.37 Aligned_cols=387 Identities=27% Similarity=0.363 Sum_probs=334.4
Q ss_pred CCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCcccccc-CCCCCCCHHHHHHHHHcC
Q 012667 18 MKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLCG 96 (458)
Q Consensus 18 ~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~-~~~~~~da~~v~~L~~aG 96 (458)
+.+|||+...+. + ..+++.+|||||||+|||+|+|||++||+||..+.+ ..++++||++|++||++|
T Consensus 5 ~~~~a~~~~~~~---------~---~~~~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~~~~~~~dA~vV~~L~~aG 72 (395)
T PRK08310 5 DPFNAFIAKPDK---------P---LPHAASGPLAGLRFAVKDVFDVAGYVTGCGNPDWLAESPVATRTAPAVEKLLAAG 72 (395)
T ss_pred CccccccccCCC---------C---CCCCCCCCcCCCeEEEeeccccCCCccCCCCHHHHhcCCCCCCCHHHHHHHHHCC
Confidence 459999998532 1 147788999999999999999999999999987633 346679999999999999
Q ss_pred CeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCccccccccccceeecCCC
Q 012667 97 AILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPTF 176 (458)
Q Consensus 97 ai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSiR~PAa~~Gv~G~kPt~ 176 (458)
||++||||||||+++.+|.|+.||+|+||||++|+|||||||||++||+|++++++|||||||||+||+||||||||||+
T Consensus 73 Aii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~~~~pGGSSgGsAaaVAag~~~~aiGtDtGGSIRiPAa~cGv~G~KPT~ 152 (395)
T PRK08310 73 ARFVGKTQTDELAFSLNGQNAHYGTPVNPAAPDRVPGGSSSGSAAAVAGGLADFALGTDTGGSVRAPASFCGLYGLRPTH 152 (395)
T ss_pred CEEEEeccchHHhcCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHcCCcceEEecCCCCCeecchHhcCeeEeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCCeEEEEeCCCCcCCCHH
Q 012667 177 GRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWFNDCSDD 256 (458)
Q Consensus 177 g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~lrIgv~~~~~~~~~~~ 256 (458)
||+|+.|+.|+++++|++||||||++|+++++++|.++|+.+. ...+||++..+++..++++
T Consensus 153 Grvs~~G~~~~~~~~d~~Gp~arsv~D~~~~~~~l~g~~~~~~------------------~~~~ri~~~~~~~~~~~~~ 214 (395)
T PRK08310 153 GRISLEGVMPLAPSFDTVGWFARDIALLERVGEVLLGDDAQEF------------------PLTQRLLIPVDLFALLDPA 214 (395)
T ss_pred CcccCCCCcccccCCCeeeeeeCCHHHHHHHHHHHcCCCcccC------------------CcCceEEEeccccccCCHH
Confidence 9999999999999999999999999999999999999655431 0236899987665558999
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEeeCC--ChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhccCCCHHHH
Q 012667 257 IRVCCSRAVDKLCERYGWKVVEVTIP--NIEVMRLAHYLTIGSECSTSLSSYLQKINCSDQGWDARVALSVYGSFSSQEY 334 (458)
Q Consensus 257 v~~a~~~a~~~L~~~~G~~Vv~~~~p--~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~y 334 (458)
++++++++++.|+++ +.++++++.+ .++.....+..+...|....+..+.+. ....+.+.++.+++.+..++..+|
T Consensus 215 v~~a~~~a~~~L~~~-~g~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~ 292 (395)
T PRK08310 215 VRAALEAALARLRPH-LGPAKPASVPPLSLDEWYEAFRVLQAAEAWETHGAWISS-GNPQLGPGVADRFAAGAEVTADQV 292 (395)
T ss_pred HHHHHHHHHHHHHHh-CCceeeecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHh-chhhcCHHHHHHHHhhccCCHHHH
Confidence 999999999999986 4488888754 345555555556667777777776655 445689999999988999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhhhhhcccccccccCCCeEEEecccCCCCC
Q 012667 335 IKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGL 414 (458)
Q Consensus 335 ~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~gl 414 (458)
.++++.|+++++++.++|+++|+||+||++.++|+++... .... .....++.||.+||++|+|+++||+|+ .+||
T Consensus 293 ~~a~~~r~~~~~~~~~~~~~~Dvll~Pt~~~~a~~~~~~~---~~~~-~~~~~~~~~t~~~N~~G~PaisvP~g~-~~gl 367 (395)
T PRK08310 293 EAARARRAAFARELAALLGPDAVLLLPTVPGAAPLRGAPF---EALE-AYRERALRLLCIAGLAGLPQISLPLAS-VDGA 367 (395)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCccCCCcc---chHH-HHHHHHHhhceeehhcCCCeEEEECCC-CCCC
Confidence 9999999999999999999999999999999999986521 1110 111223468999999999999999997 5799
Q ss_pred ceEEEEEcCCCChHHHHHHHHHHHHhc
Q 012667 415 PIGLQFIGKPWSEPTLMHIAFAMQALC 441 (458)
Q Consensus 415 PvGlQlvg~~~~D~~ll~~a~~lE~~~ 441 (458)
|+||||+|++++|+.||++|++||++.
T Consensus 368 PvglQivg~~~~D~~lL~~a~~le~~~ 394 (395)
T PRK08310 368 PFGLSLIGPRGSDRSLLALAQTIAAAR 394 (395)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHhhh
Confidence 999999999999999999999999874
No 29
>PLN02722 indole-3-acetamide amidohydrolase
Probab=100.00 E-value=9.6e-91 Score=690.93 Aligned_cols=387 Identities=25% Similarity=0.329 Sum_probs=330.0
Q ss_pred CCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCcccccc-CCCCCCCHHHHHHHHHc
Q 012667 17 PMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK-VRPCTGDACCVMRLRLC 95 (458)
Q Consensus 17 ~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~-~~~~~~da~~v~~L~~a 95 (458)
|+.+|+|++....+. .++...||||||||+|||+|||+|++||+||+.+.+ +.++.+||++|++|+++
T Consensus 4 ~~~~~a~~~~~~~~~-----------~~~~~~gpL~GvPiaVKD~~~v~G~~Tt~GS~~~~~~~~~~~~dA~vV~rL~~A 72 (422)
T PLN02722 4 NPDYGAFMEKFVLSP-----------TSSSHDLPLHGLTFAVKDIFDVEGYVTGFGNPDWARTHSAATSTAPAVLAVLRG 72 (422)
T ss_pred CCCCCcceeeccccC-----------CCCCCCCCCCCCeEEEEcccccCCCccCCCCHHHHhcCCCCCCChHHHHHHHHC
Confidence 357999999842200 123466899999999999999999999999986653 44567899999999999
Q ss_pred CCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCccccccccccceeecCC
Q 012667 96 GAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSVRMPAALCGVVGFKPT 175 (458)
Q Consensus 96 Gai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSiR~PAa~~Gv~G~kPt 175 (458)
|||++|||||+||+++.+|.|++||+|+||||++|+|||||||||++||+|++++|+|||||||||+||+||||||||||
T Consensus 73 GAiilGKTn~~Efa~~~~g~n~~~G~t~NP~~~~r~pGGSSsGSAaAVAaG~~p~AlGtDtgGSIRiPAa~cGvvG~KPT 152 (422)
T PLN02722 73 GATCVGKTIMDEMAYSINGENAHYGTPTNPIAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPS 152 (422)
T ss_pred CCEEEEEechhhHhhCCCCCCCCCCCCCCCCCCCCCCCcCcHHHHHHHHcCCCceEeecCCCcccccChhHcceEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCCcccccccCCCCCCeEEEEeCCCCc---C
Q 012667 176 FGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKVSFPLLKSATSISAIKLAKYDAWFN---D 252 (458)
Q Consensus 176 ~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~~~~~~~~~~~~~~lrIgv~~~~~~---~ 252 (458)
+|+||+.|++|+++++|++|||||||+|+++++++|.++++.|. ...+||++..+.+. .
T Consensus 153 ~G~vp~~G~~pla~sld~~G~~ar~v~D~a~~~~~l~g~~~~d~------------------~~~~ri~~~~~~~~~~~~ 214 (422)
T PLN02722 153 HGAVSTVGVIPMAQSFDTVGWFARDPVILKRVGHVLLQQPDVNP------------------IKPSQIIIAEDCFQLSSI 214 (422)
T ss_pred CCccCCCCCCcccCCCCcccceeCCHHHHHHHHHHHcCCCCCCC------------------cCCceEEechhhhhhccc
Confidence 99999999999999999999999999999999999999665432 12479999876553 2
Q ss_pred CCHHHHHHHHHHHHHHHHhcCcEEEEeeCCC-hHH-------------------------HHHHHHHHHHHHHHHHHHHH
Q 012667 253 CSDDIRVCCSRAVDKLCERYGWKVVEVTIPN-IEV-------------------------MRLAHYLTIGSECSTSLSSY 306 (458)
Q Consensus 253 ~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~-~~~-------------------------~~~~~~~~~~~e~~~~~~~~ 306 (458)
.++++.++++++++.|+++ |++|++++++. .+. ....+..+...|....+..+
T Consensus 215 ~~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 293 (422)
T PLN02722 215 PHDRLVQVLVKSVEKLFGG-GDIVKHVNLGDYVEDKVPSLKHFMSKEIKEQEYNIPSLAALSSAMRLLQRYEFKINHGEW 293 (422)
T ss_pred ccHHHHHHHHHHHHHHhcC-CCeeeecchhHHHHHhHHHHHHHhhcccccceecchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688999999999999998 99998876641 111 11233345566777777777
Q ss_pred HHhcCCCCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHhccCCEEEccCCCCCcccccchhhhcCcchhhhhh
Q 012667 307 LQKINCSDQGWDARVALSVYGSFSSQEYIKAQKIRNHQMQIHRNVFAKADVIVVPTTGVTAYEIKDDALKTGELDYIYGA 386 (458)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~~s~~~y~~a~~~r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~ 386 (458)
++. ..+.+++.++.+++.+..++..+|.++++.|++++++++++|+++|+||+||+|.+||+++... .... ....
T Consensus 294 ~~~-~~~~~~~~v~~~~~~g~~~s~~~y~~a~~~r~~~~~~~~~~~~~~D~Ll~Pt~p~~ap~~~~~~---~~~~-~~~~ 368 (422)
T PLN02722 294 ITA-VKPEFGPGISERIWEAVRTTEEKIDACQSVKTELRAALTTLLGEFGVLVIPTVPGPPPKLQADP---TTLE-SFRA 368 (422)
T ss_pred HHh-hhhhCCHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCcccCc---chHH-HHHH
Confidence 765 4567999999999999999999999999999999999999999999999999999999886421 1100 1112
Q ss_pred hhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHH
Q 012667 387 ALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQA 439 (458)
Q Consensus 387 ~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~ 439 (458)
.++.||.++|++|+|+|+||++++ +|||+||||+|++++|..||++|+.|.+
T Consensus 369 ~~~~~t~~~nl~G~PaisvP~g~~-~glPvGlqivg~~~~D~~lL~~a~~l~~ 420 (422)
T PLN02722 369 RAFSLLSIAGVSGFCQVSIPLGLH-DNLPVSVSLLAKHGSDGFLLNLVESLYG 420 (422)
T ss_pred HHHHhhhcccccCCCEEEEeCCCC-CCCCEEEEEECCCCChHHHHHHHHHHHh
Confidence 445689999999999999999987 7999999999999999999999999865
No 30
>PRK06565 amidase; Validated
Probab=100.00 E-value=1.7e-88 Score=681.35 Aligned_cols=443 Identities=23% Similarity=0.300 Sum_probs=334.0
Q ss_pred CHHHHHHHHHHhhC--CCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCcccccc
Q 012667 1 MVAERFIAAVRESS--NPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHK 78 (458)
Q Consensus 1 ~~~~~~~~~i~~~~--~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~ 78 (458)
||+++|++||+++| ...+.+|+|+.++++ |+++|+++|+++++|+++||||||||+|||||++||++||+||..+.+
T Consensus 25 elv~a~l~ri~~~~~~~~~~~lna~~~~~~~-Al~~A~~~D~~~~~g~~~gpL~GIPi~vKD~~~v~G~~TT~Gs~~l~~ 103 (566)
T PRK06565 25 ELVKAYLARIDAYDGPATGTALNAVVVRNPD-ALKEAEASDARRARGETLGPLDGIPYTAKDSYLVKGLTAASGSPAFKD 103 (566)
T ss_pred HHHHHHHHHHHHhCccccCcceEEEEecCHH-HHHHHHHHHHHHhcCCCCCCCCCCEEEEecccccCCCCcccccHhhcC
Confidence 68999999999998 233579999999876 999999999999999999999999999999999999999999988877
Q ss_pred CCCCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCC----CCCCCchHHHHHHHhCCccceeec
Q 012667 79 VRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK----ITGGSSSGSAAVVAAGLCPVALGV 154 (458)
Q Consensus 79 ~~~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~----~~GGSSgGsaaava~g~~~~a~gt 154 (458)
.. +.+||++|++||++|||++||||||||+++.++ |.+||+|+||||++| +|||||||||++||+|++++++||
T Consensus 104 ~~-~~~DA~vV~rLr~AGAIilGKTnm~E~a~g~~~-~~~~G~t~NP~n~~~~~~~~pGGSSgGsAaAVAag~~~~alGt 181 (566)
T PRK06565 104 LV-AQRDAFTIERLRAAGAICLGKTNMPPMANGGMQ-RGVYGRAESPYNAAYLTAPFASGSSNGAGTATAASFSAFGLAE 181 (566)
T ss_pred CC-CCCCHHHHHHHHHCCCEEEEecccchhhhCCCC-CCCCCCcCCCcCcccCcCCCCCCCCccHHHHHhCCCCcceeec
Confidence 64 579999999999999999999999999999876 679999999999999 599999999999999999999999
Q ss_pred cCCCccccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCC--CC-----CC-
Q 012667 155 DGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTV--SL-----PK- 226 (458)
Q Consensus 155 D~gGSiR~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~--~~-----p~- 226 (458)
|||||||+||+||||||||||+|++|+.|++|+++++|++|||+|||+|+++++++|.++|+.|..+. .. |.
T Consensus 182 DtgGSIR~PAa~~GivG~KPT~G~vs~~Gv~p~~~s~D~vGp~aRsV~D~a~~l~vl~g~D~~d~~~~~~~~~~~~~p~~ 261 (566)
T PRK06565 182 ETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYARTMADLLEVLDVIVADDPDTRGDLWRLQPWVPIPKA 261 (566)
T ss_pred CCCCchhhhHHHcCeeEEeCCCCccCCCCcccccCCCCeecceeCCHHHHHHHHHHhcCCCcccccchhhccccccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999988764321 11 10
Q ss_pred -----Cccccc-ccCCCCCCeEEEEeCCCCcC---------------------CCHHHHHHHHHHHHHHHHhcCcEEEEe
Q 012667 227 -----VSFPLL-KSATSISAIKLAKYDAWFND---------------------CSDDIRVCCSRAVDKLCERYGWKVVEV 279 (458)
Q Consensus 227 -----~~~~~~-~~~~~~~~lrIgv~~~~~~~---------------------~~~~v~~a~~~a~~~L~~~~G~~Vv~~ 279 (458)
.++... .....++++|||++.+++.. +++++.++++++++.|+++ |++|+++
T Consensus 262 ~~~~~~~y~~~~~~~~~l~g~RIGv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~L~~~-Ga~vv~v 340 (566)
T PRK06565 262 SEVRPASYLALAAGADALKGKRFGVPRMYINADPDAGTSENPGIGGPTGQRIHTRPSVIDLWEAARRALEAA-GAEVIEV 340 (566)
T ss_pred cccCccchhhhhccccCCCCCEEEEEChhhccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHC-CCEEEEe
Confidence 111111 11245789999998765421 4689999999999999998 9999999
Q ss_pred eCCChHHHHHH--------HHHHHHHHHH---------HHHHHHHHhcCCCCC------------------CHHHHH---
Q 012667 280 TIPNIEVMRLA--------HYLTIGSECS---------TSLSSYLQKINCSDQ------------------GWDARV--- 321 (458)
Q Consensus 280 ~~p~~~~~~~~--------~~~~~~~e~~---------~~~~~~~~~~~~~~~------------------~~~~~~--- 321 (458)
++|.+..+... .......|+. ..++.|+.......+ .++...
T Consensus 341 ~~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~yL~~~~~~~~~sl~di~~~~~~~~~~~~~~~~~~~~~ 420 (566)
T PRK06565 341 DFPLVSNCEGDRPGAPTVFNRGLVSPEFLHDELWELSGWAFDDFLRANGDPKLNRLADVDGPQIFPHDPGTLPNREGDLA 420 (566)
T ss_pred ecCCccccccccccccccccccccchhhhhccccchhHHHHHHHHHhcCCCCCCCHHHhhhhhcccCcccccccchhhhh
Confidence 98864322110 0011223442 235666654321111 010000
Q ss_pred -----HHHh---c-cC-CCHHHHHHHHHHHHHHHH-HHHHHh--ccCCEEEccCCCCCcccccchhhhcCcchhhhhhhh
Q 012667 322 -----ALSV---Y-GS-FSSQEYIKAQKIRNHQMQ-IHRNVF--AKADVIVVPTTGVTAYEIKDDALKTGELDYIYGAAL 388 (458)
Q Consensus 322 -----~l~~---~-~~-~s~~~y~~a~~~r~~~~~-~~~~~f--~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~ 388 (458)
..+. + .. .....|.+.++.++..++ .+++.| .++|+||.|+.+..++.+.+...........+.. +
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~lDalv~P~~~~~~~~~~~~~~~~~~~~~~~g~-~ 499 (566)
T PRK06565 421 AGMDEYVNMAKRGLKSWDQIPTLPDGLRGLEKTRKLDLEDWMDGLGLDAVLFPTVADVGPADADVNPASADIAWSNGV-W 499 (566)
T ss_pred hhHHHHHHHhhcCCCChhhccchHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCccccccccchhhhhccccCc-c
Confidence 0010 0 11 111123333333322222 233333 3799999999988888766533221111111111 2
Q ss_pred hccccc-ccccCCCeEEEecccC-CCCCceEEEEEcCCCChHHHHHHHHHHHHhccccCCCCc
Q 012667 389 VRYQIA-GNFLGLPAVTVPVGYD-TAGLPIGLQFIGKPWSEPTLMHIAFAMQALCISEFRKPK 449 (458)
Q Consensus 389 ~~~t~~-~Nl~g~PaisvP~g~~-~~glPvGlQlvg~~~~D~~ll~~a~~lE~~~~~~~~~p~ 449 (458)
.+.+.. .+++|+|+||||+|+. ..|||+||+|+|++|+|..||++|++||++.+ .+..|+
T Consensus 500 ~~ng~~a~~~~G~P~vtVP~G~~~~~G~PvGl~~~G~a~~e~~Ll~~A~a~E~~~~-~r~~p~ 561 (566)
T PRK06565 500 VANGNLAIRHLGVPTVTVPMGVMADIGMPVGLTFAGRAYDDNALLRFAAAFEATGS-RRMVPP 561 (566)
T ss_pred cccchhhHHhcCCCeeEeeccccCCCCCCeeEEeecCCcchHHHHHHHHHHHHHhc-CCCCCC
Confidence 233333 4899999999999998 48999999999999999999999999999985 344443
No 31
>KOG1211 consensus Amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-81 Score=612.55 Aligned_cols=427 Identities=35% Similarity=0.500 Sum_probs=346.4
Q ss_pred HHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccC-CCCccccccCC
Q 012667 2 VAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPT-TGGTKWLHKVR 80 (458)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~t-t~Gs~~~~~~~ 80 (458)
+++.+++++..++ +..+.+..++ ++++.+|++.|.+++++...+||+|+||+|||||++||++| ||+|..+.++.
T Consensus 37 ~ie~~l~~~~~~~---~~~~~i~~~~-~~~~~~a~~~~~~~~~~~~~~~L~Gv~i~IKDnf~tk~~~t~t~~S~~l~~~~ 112 (506)
T KOG1211|consen 37 IIESYLERINKWK---PLNAKITVIN-EEALKQAEEVTRRRKNGMEKGPLQGVPIAIKDNFDTKDKPTTTAASWMLEHYN 112 (506)
T ss_pred HHHHHHHHHhhcc---cccceeeecc-HHHHHHhhhccccccCCCcCCCcCCceEEEeeceecCCccCCchhhhhhccCC
Confidence 5788999999986 6455555555 56999999999999999999999999999999999999999 78887777665
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
+++||++|++||++||+++|||||+||+||..+.|.+||+|+|||++.+.|||||||||++||++++++|+|||||||+
T Consensus 113 -~p~dAtVV~~L~~aGaiilGKTnmdEfamg~~~~~s~~G~t~np~~~~~v~GGSS~GSA~aVaa~l~~~alGtDTgGSv 191 (506)
T KOG1211|consen 113 -PPKDATVVKKLREAGAIILGKTNMDEFAMGSSGENSHYGTTRNPLSLWRVPGGSSSGSAAAVAAGLCDFALGTDTGGSV 191 (506)
T ss_pred -CccccHHHHHHhhcCceEEccccHHHHhhccccccccCCccCCCCcccccCCCCcchhHHHHHhccchhhccccCCCCc
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCCCCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCCC-cccccc-cCCCC
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNWTVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPKV-SFPLLK-SATSI 238 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~~-~~~~~~-~~~~~ 238 (458)
|+||++|||+|||||+|++|+.|++|++.++|++||+||||.|+..++.++.+.|..|..+...|.. ++.... ...++
T Consensus 192 R~PAa~~gvvG~KPT~G~~Sr~Gvip~~~SlD~vGi~a~tv~D~~~v~~~~~g~d~~d~~t~~~p~~~~~~~~~~~~~~l 271 (506)
T KOG1211|consen 192 RVPAAYCGVVGFKPTYGRVSRFGVIPLSNSLDTVGIFARTVYDAVEVLGAIVGIDELDSTTLAQPAPFPIVLELIGSMDL 271 (506)
T ss_pred cCcHHhcCccccccCcceecccccchhhhcccccchhhcccchhHHHhhhhcCCCccCcccccCCcccccchhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999888877666552 111111 13368
Q ss_pred CCeEEEEeCCCCcC-CCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHHHh--------
Q 012667 239 SAIKLAKYDAWFND-CSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQK-------- 309 (458)
Q Consensus 239 ~~lrIgv~~~~~~~-~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~-------- 309 (458)
.++|+|++.++... ++.++.+.++...+.|+.. |..+.++.+|........+......|..+++.++-.-
T Consensus 272 ~~~r~GIp~~~~~~~~~~~v~~~~~~~~~~l~~~-~~~~~~~~lp~~~~~~~~~~~~s~~ea~s~laryd~~~~~~r~~~ 350 (506)
T KOG1211|consen 272 SGLRIGIPKERLVQGLSSGVLSLWEELADLLGSL-GAKVNEVSLPTTINGLCGYSLSSASEAASNLARYDGILYGHRRDF 350 (506)
T ss_pred cccccCceeecccccccHHHHHHHHHHHHHhhcc-cccceeeecchhhhccccccccchhhhhhhHHHHHHHHhhcchhh
Confidence 89999999998776 6789999999999999998 9999999999766554445544445555555443111
Q ss_pred ----------cCCCCCCHHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHH---HHhccCCEEEccCCCCCccccc
Q 012667 310 ----------INCSDQGWDARVALSVYG-----SFSSQEYIKAQKIRNHQMQIHR---NVFAKADVIVVPTTGVTAYEIK 371 (458)
Q Consensus 310 ----------~~~~~~~~~~~~~l~~~~-----~~s~~~y~~a~~~r~~~~~~~~---~~f~~~D~ll~Pt~~~~a~~~~ 371 (458)
.+...+..+++.++..+. ......+.+|++.|+.....+. ..++++|+|++||.+.+.+..-
T Consensus 351 ~~~~~~v~~~~rs~~~n~~v~~~i~~g~~~l~~~~~~~~f~~a~~~rr~i~~~~~~~~~~~~~vD~l~~pt~~~~~~~~~ 430 (506)
T KOG1211|consen 351 KVADEEVYALSRSFGFNFEVKGRILSGNYILAKENDQDYFEKALEVRRLIQEDFNRRKAALEGVDYLVTPTAPPPLYREF 430 (506)
T ss_pred hhccceeeeeccccccchhhcceeeccceehhhhhhHHHHHHHHHHHHHHHHhhhhcccccccCCeeeccCCCCcchhhh
Confidence 111223334444443322 2233444566777777776666 6789999999999433222211
Q ss_pred chhhhcCcchhhhhhhhhcccccccccCCCeEEEecccCCCCCceEEEEEcCCCChHHHHHHHHHHHH
Q 012667 372 DDALKTGELDYIYGAALVRYQIAGNFLGLPAVTVPVGYDTAGLPIGLQFIGKPWSEPTLMHIAFAMQA 439 (458)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g~~~~glPvGlQlvg~~~~D~~ll~~a~~lE~ 439 (458)
. . ..........+.+++++|++|+|+|+||+|+..+|+|+|+|+||..++|..++.++.++|+
T Consensus 431 ~----~-~~~~~~~~~~~~~~~~anlaGlP~isiP~G~~~~g~P~glqi~g~~~~e~~~~~l~~~~~~ 493 (506)
T KOG1211|consen 431 E----K-ETLFAVSTLDDIFTQPANLAGLPAISIPVGLKNGGLPIGLQIMGGAFAEPTLIDLALAIGQ 493 (506)
T ss_pred h----h-cccccccccccceeecccccCCCceEEeeeecCCCCceEEEeecccccchHHHHHHHhhcc
Confidence 1 1 1111122233467999999999999999999999999999999999999999999999988
No 32
>KOG1212 consensus Amidases [Translation, ribosomal structure and biogenesis; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-76 Score=583.39 Aligned_cols=430 Identities=25% Similarity=0.324 Sum_probs=337.6
Q ss_pred CHHHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCC
Q 012667 1 MVAERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVR 80 (458)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~ 80 (458)
|++.+|++|+...| +.+||++++.+|.++.+|+..|+.+..+...+||+||||+|||+|.|||+.+|+|.....+ .
T Consensus 73 ~vl~Ay~~Ra~~vn---~~lNcV~~~i~e~~~~~a~~~d~~~~~~~~k~PL~GvP~SvKe~~~vkg~d~T~G~~~~~~-~ 148 (560)
T KOG1212|consen 73 EVLCAYCHRAIEVN---QKLNCVVEFIFEAALQAAALDDEYTAPLYEKPPLYGVPFSVKESISVKGYDSTAGLLARTN-Q 148 (560)
T ss_pred HHHHHHHHHHHHhc---cCcceeeeehhhHHHHHhhchhhhhchhcccCCceecceehhhheeecCccccchhhhccC-C
Confidence 58999999999998 9999999999999999999888877777678899999999999999999999999975544 5
Q ss_pred CCCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHhCCccceeeccCCCcc
Q 012667 81 PCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAAGLCPVALGVDGGGSV 160 (458)
Q Consensus 81 ~~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~a~gtD~gGSi 160 (458)
++++|+.+|+.||++|||++.+||+||..|+..+.|+.||+|.||||.+++|||||||+|+++++|.+++|||||+||||
T Consensus 149 ~a~~ds~~V~~lk~~GaIpf~~TnvPq~~ls~~tsn~v~G~T~NP~d~~rt~GGSSGGEaALigaggS~lGiGsDigGSi 228 (560)
T KOG1212|consen 149 PATTDSVIVEFLKKLGAIPFVLTNVPQSLLSYETSNPVYGTTKNPYDLSRTPGGSSGGEAALLGAGGSLLGIGSDIGGSI 228 (560)
T ss_pred CCccchHHHHHHHHcCCCceeecCCchhhhhhhhcCCCCCCCCChhhccCCCCCCchHHHHHHhCCcceeccccccCCce
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeecCCCCcccCCCCCCCCC----CCceeccCCCCHHHHHHHHHHHcCCCCCCCCCCCCCC-Cccccccc-
Q 012667 161 RMPAALCGVVGFKPTFGRIPLSGVLPLNW----TVGMVGILAATVEDALVVYAAINGPLPSQQPTVSLPK-VSFPLLKS- 234 (458)
Q Consensus 161 R~PAa~~Gv~G~kPt~g~~s~~G~~p~~~----~ld~~Gpmarsv~Dl~~l~~~l~~~d~~d~~~~~~p~-~~~~~~~~- 234 (458)
|+||+|||++|+|||.+|+|..|..+..+ .+.++|||+|+++|+.++++.+.+.. ..+..+|. +++++...
T Consensus 229 RiPa~f~Gl~GlKPT~~r~~~~G~~~~~~g~~~~~~~~GPm~r~v~dl~~~L~~~i~~~---~~~~~~p~~~p~~~~~~~ 305 (560)
T KOG1212|consen 229 RIPAAFCGLFGLKPTPGRVSVKGHHPSVPGRETIMLVIGPMTRDVEDLVLLLRLMIGDS---GPKLLDPYPVPVKFMEVF 305 (560)
T ss_pred eechhhccccccCCCCCeeeecCcCCCCCcccccccccCcccccHHHHHHHHHHhcCCc---cccccCCCCCCchhhhhh
Confidence 99999999999999999999999988644 47799999999999999999999943 23444444 45555543
Q ss_pred CCCCCCeEEEEeCCC-CcCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Q 012667 235 ATSISAIKLAKYDAW-FNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIPNIEVMRLAHYLTIGSECSTSLSSYLQKINC- 312 (458)
Q Consensus 235 ~~~~~~lrIgv~~~~-~~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~- 312 (458)
..+.++++||++.+. +.++.|.+++|+.+.++.|++. ||+++++.+|.++.....+.. ...+....+...+.....
T Consensus 306 y~~~~~~~ig~~~~dg~~~~~pa~~RAv~~~~~~l~~~-g~~~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 383 (560)
T KOG1212|consen 306 YKSSDKLVIGYYVDDGFFDPSPAMQRAVQETIDLLEKA-GHEVVPFDLPDLKHVADMFFR-VMPDDGDYISEMYLLDIGD 383 (560)
T ss_pred hhccCCccceEEecCCCCCcCHHHHHHHHHHHHHHHhc-CcceeEecCCcchHHHHHHHH-HcccccchhhHHhhcccCc
Confidence 345678999998554 3458999999999999999998 999999999988765554444 222222222222211000
Q ss_pred C---------CCCHH-HHHHH--------Hhcc--CCCHHHHHHHHHH--HHHHHHHHHHHhccCCEEEccCCCCCcccc
Q 012667 313 S---------DQGWD-ARVAL--------SVYG--SFSSQEYIKAQKI--RNHQMQIHRNVFAKADVIVVPTTGVTAYEI 370 (458)
Q Consensus 313 ~---------~~~~~-~~~~l--------~~~~--~~s~~~y~~a~~~--r~~~~~~~~~~f~~~D~ll~Pt~~~~a~~~ 370 (458)
. .+... +...+ .... .....+-.+.+.. +.+.+........+.|+||||+.+.+||+|
T Consensus 384 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~e~yrlk~~~~~~~~~~dVll~Ps~~~pA~~h 463 (560)
T KOG1212|consen 384 PTLNLFVKFVELPKVFLGRSLHSYIVLPFCIMDAKNSDTAELRQNYEDIESYRLKFILYWLLGKDDVLICPSFPTPAPPH 463 (560)
T ss_pred cccchheeeeeccHHHHhhhhhhhHhHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHcCCCCEEEeCCCCCCCCcC
Confidence 0 01101 11100 1111 1111222222222 222233333445789999999999999999
Q ss_pred cchhhhcCcchhhhhhhhhcccccccccCCCeEEEecc--------------------------cCCCCCceEEEEEcCC
Q 012667 371 KDDALKTGELDYIYGAALVRYQIAGNFLGLPAVTVPVG--------------------------YDTAGLPIGLQFIGKP 424 (458)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~t~~~Nl~g~PaisvP~g--------------------------~~~~glPvGlQlvg~~ 424 (458)
+........ +.||.+||++|+||.+||++ .+..|||+|||||+++
T Consensus 464 ~~P~~~~~~---------~~Yt~LfN~Ld~Pag~vpvt~v~~~d~~~~~~~~~D~~~~~~~~g~~~s~GlPigVQVVa~p 534 (560)
T KOG1212|consen 464 NYPLLLVNG---------FSYTGLFNVLDFPAGVVPVTTVTQKDEKEEEYPMNDKWATKVPKGSLDSRGLPIGVQVVANP 534 (560)
T ss_pred CCchhhccc---------hhHHHHHHhccCCcccccccccchhhhcccccccccHHHHhCcccccCCCCCceeEEEecCC
Confidence 764332222 36899999999998888876 3457999999999999
Q ss_pred CChHHHHHHHHHHHHhccccCCCCc
Q 012667 425 WSEPTLMHIAFAMQALCISEFRKPK 449 (458)
Q Consensus 425 ~~D~~ll~~a~~lE~~~~~~~~~p~ 449 (458)
++|+.+|++|+++|+.++. +.+|.
T Consensus 535 ~~delcL~va~~lE~~~gg-~~~p~ 558 (560)
T KOG1212|consen 535 NQDELCLAVARELERKFGG-WVRPG 558 (560)
T ss_pred CchHHHHHHHHHHHHHhCC-ccCCC
Confidence 9999999999999999974 44443
No 33
>TIGR03847 conserved hypothetical protein. The conserved hypothetical protein described here occurs as part of the trio of uncharacterized proteins common in the Actinobacteria.
Probab=36.06 E-value=58 Score=28.17 Aligned_cols=35 Identities=17% Similarity=0.111 Sum_probs=30.0
Q ss_pred EEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEE
Q 012667 22 FFINYNEEDILKQATESTLRYKKGEPISVLDGVLI 56 (458)
Q Consensus 22 a~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi 56 (458)
.-+.+..+.|++-|+.+.+-.+.|.+.-||+|-||
T Consensus 132 lrv~lt~~~ARafa~Ra~~VVaAGRP~CPlCg~Pl 166 (177)
T TIGR03847 132 LRVRLTPGQARAFAKRARRVVAAGRPPCPLCGRPI 166 (177)
T ss_pred EEEEcCHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 34456778888889999998999999999999998
No 34
>PF11290 DUF3090: Protein of unknown function (DUF3090); InterPro: IPR021441 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=34.11 E-value=63 Score=27.91 Aligned_cols=35 Identities=14% Similarity=0.092 Sum_probs=29.8
Q ss_pred EEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEE
Q 012667 22 FFINYNEEDILKQATESTLRYKKGEPISVLDGVLI 56 (458)
Q Consensus 22 a~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi 56 (458)
.-+.+...+|++-|+.+.+-.+.|.+.-||+|-|+
T Consensus 130 lrv~lt~~~ARafa~ra~~VVaAGRP~CPlCg~Pl 164 (171)
T PF11290_consen 130 LRVRLTPGQARAFARRAREVVAAGRPPCPLCGEPL 164 (171)
T ss_pred EEEEcCHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 33446778899999999998999999999999997
No 35
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=31.58 E-value=88 Score=24.07 Aligned_cols=24 Identities=29% Similarity=0.415 Sum_probs=20.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcCcEEE
Q 012667 253 CSDDIRVCCSRAVDKLCERYGWKVV 277 (458)
Q Consensus 253 ~~~~v~~a~~~a~~~L~~~~G~~Vv 277 (458)
.....+.+|.++.+.|++. |++|+
T Consensus 10 ~~~~N~~~f~~~a~~L~~~-G~~vv 33 (92)
T PF14359_consen 10 LPDYNRPAFNAAAKRLRAK-GYEVV 33 (92)
T ss_pred CcchHHHHHHHHHHHHHHC-CCEEe
Confidence 4567789999999999998 99887
No 36
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=27.38 E-value=1.5e+02 Score=29.02 Aligned_cols=80 Identities=10% Similarity=-0.010 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHHcCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCCCC
Q 012667 3 AERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPC 82 (458)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~~~ 82 (458)
.+..++.+++++ +++++.+-=+..++.|..+.+.+++-..-=+.-|||-+|-.. +.|...|.|.....+
T Consensus 81 ~~~~~~~l~~~~-----I~~Lv~IGGd~s~~~a~~L~e~~~~~~~~i~vigiPkTIDND--l~~td~s~Gf~TA~~---- 149 (338)
T cd00363 81 RAKAAENLKKHG-----IDALVVIGGDGSYTGADLLTEEWPSKYQGFNVIGLPGTIDND--IKGTDYTIGFDTALK---- 149 (338)
T ss_pred HHHHHHHHHHhC-----CCEEEEeCCHHHHHHHHHHHHHHHhcCCCccEEEeeecccCC--CcCcccCcCHHHHHH----
Confidence 356677778876 999999987788888888877655332223688999988654 448888888742211
Q ss_pred CCCHHHHHHHHH
Q 012667 83 TGDACCVMRLRL 94 (458)
Q Consensus 83 ~~da~~v~~L~~ 94 (458)
.=+..+..|+.
T Consensus 150 -~~~~~i~~l~~ 160 (338)
T cd00363 150 -TIVEAIDRIRD 160 (338)
T ss_pred -HHHHHHHHHHH
Confidence 22556666644
No 37
>PF12965 DUF3854: Domain of unknown function (DUF3854); InterPro: IPR024385 This is a family of uncharacterised proteins, found by clustering human gut metagenomic sequences [].
Probab=24.20 E-value=2.1e+02 Score=23.60 Aligned_cols=43 Identities=23% Similarity=0.176 Sum_probs=30.9
Q ss_pred CCeEEEEeCCCCcCCCHHHHHHHHHHHHHHHHhcCcEEEEeeCC
Q 012667 239 SAIKLAKYDAWFNDCSDDIRVCCSRAVDKLCERYGWKVVEVTIP 282 (458)
Q Consensus 239 ~~lrIgv~~~~~~~~~~~v~~a~~~a~~~L~~~~G~~Vv~~~~p 282 (458)
+...|.+..|.-......|.+++++..+.|++. |++|.-+..|
T Consensus 69 r~v~iaFD~D~~~~Tn~~V~~a~~~l~~~L~~~-G~~v~~~~w~ 111 (130)
T PF12965_consen 69 REVYIAFDADTKPKTNKNVRRAIKRLGKLLKEA-GCKVKIITWP 111 (130)
T ss_pred ceEEEEecCCCccchhHHHHHHHHHHHHHHHHC-CCEEEEEEeC
Confidence 345566544322223589999999999999998 9998877655
No 38
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=22.90 E-value=2.1e+02 Score=30.52 Aligned_cols=81 Identities=10% Similarity=0.050 Sum_probs=56.2
Q ss_pred HHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHH-cCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCCC
Q 012667 3 AERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYK-KGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRP 81 (458)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~-~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~~ 81 (458)
.++.++.+++++ +++++.+-=+..+..|..+.+.++ .+.. =+.-|||-+|-..+.-.+..+|.|.....+
T Consensus 162 ~~~i~e~l~~l~-----Id~LvvIGGddS~~~A~~Lae~~~~~~~~-i~VIGIPKTIDNDL~~~~td~s~GFdTA~k--- 232 (610)
T PLN03028 162 VNAALAACEALK-----LDGLVIIGGVTSNTDAAQLAETFAEAKCK-TKVVGVPVTLNGDLKNQFVETNVGFDTICK--- 232 (610)
T ss_pred HHHHHHHHHHcC-----CCEEEEeCCchHHHHHHHHHHHHHHcCCC-ceEEEeceeeeCCCCCCCCCCCcCHHHHHH---
Confidence 466777788876 999999977778888888877665 3322 357899999976555457888999742211
Q ss_pred CCCCHHHHHHHHH
Q 012667 82 CTGDACCVMRLRL 94 (458)
Q Consensus 82 ~~~da~~v~~L~~ 94 (458)
.-+.+|..|+.
T Consensus 233 --~~ae~I~ni~~ 243 (610)
T PLN03028 233 --VNSQLISNVCT 243 (610)
T ss_pred --HHHHHHHHHHH
Confidence 23566666643
No 39
>COG3603 Uncharacterized conserved protein [Function unknown]
Probab=21.86 E-value=64 Score=25.98 Aligned_cols=18 Identities=33% Similarity=0.342 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHhcCcEEE
Q 012667 259 VCCSRAVDKLCERYGWKVV 277 (458)
Q Consensus 259 ~a~~~a~~~L~~~~G~~Vv 277 (458)
+.+++|+++|+++ ||+|.
T Consensus 110 ~dLekAv~~L~ea-Ghev~ 127 (128)
T COG3603 110 EDLEKAVKALEEA-GHEVL 127 (128)
T ss_pred hhHHHHHHHHHHc-CCccc
Confidence 3467789999999 99985
No 40
>KOG0848 consensus Transcription factor Caudal, contains HOX domain [Transcription]
Probab=21.40 E-value=1e+02 Score=28.58 Aligned_cols=62 Identities=13% Similarity=0.127 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHHcCCeEEEeccccccccCCCCCCCCCCCCCCCCCCCCCCCCCchHHHHHHHh
Q 012667 82 CTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITGGSSSGSAAVVAA 145 (458)
Q Consensus 82 ~~~da~~v~~L~~aGai~~gkt~~~e~~~~~~~~n~~~G~~~NP~~~~~~~GGSSgGsaaava~ 145 (458)
++.+...-.+-.+.||- |..++.++......++.-||..+-=|++.+.||+||.-+.+-++-
T Consensus 47 pp~~p~~~Gy~s~~ga~--gap~l~p~~~p~~~wga~~~ap~~dw~~~~~pG~as~~~~~~~~~ 108 (317)
T KOG0848|consen 47 PPQYPDYSGYWSQMGAT--GAPDLDPAGSPQGAWGAPYPAPEVDWAPPYGPGSASPAAGMYPSP 108 (317)
T ss_pred CCCCccccCccccccCC--CCCccCcCCCCCcccCCCCCCccccccCCCCCCCCCcccccccCC
Confidence 46677777777788887 888999999888888899999988899999999998766554443
No 41
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase. Diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the addition of phosphate from diphosphate (PPi) to fructose 6-phosphate to give fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is also known as pyrophosphate-dependent phosphofructokinase. The usage of PPi-dependent enzymes in glycolysis presumably frees up ATP for other processes. TIGR02482 represents the ATP-dependent 6-phosphofructokinase enzyme contained within Pfam pfam00365: Phosphofructokinase. This model hits primarily bacterial, plant alpha, and plant beta sequences.
Probab=21.10 E-value=2.5e+02 Score=29.46 Aligned_cols=79 Identities=10% Similarity=0.043 Sum_probs=54.9
Q ss_pred HHHHHHHHHhhCCCCCCceEEEecCHHHHHHHHHHHHHHHH-cCCCCCCCcCcEEEEeeccCCCCccCCCCccccccCCC
Q 012667 3 AERFIAAVRESSNPPMKMSFFINYNEEDILKQATESTLRYK-KGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRP 81 (458)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~na~~~~~~~~a~~~A~~~d~~~~-~g~~~~~L~Gipi~vKD~~~v~g~~tt~Gs~~~~~~~~ 81 (458)
.+..++.+++++ +++++.+-=+..+..|..+.+.++ .|.. -+.-|||-+|-..+.-.+..+|.|.....+
T Consensus 150 ~~~~~~~l~~~~-----Id~LviIGGdgS~~~A~~Lae~~~~~g~~-i~VIGIPkTIDNDl~~~~td~s~GFdTA~~--- 220 (539)
T TIGR02477 150 FAKALTTAKKLK-----LDGLVIIGGDDSNTNAALLAEYFAKHGLK-TQVIGVPKTIDGDLKNQFIETSFGFDTACK--- 220 (539)
T ss_pred HHHHHHHHHHcC-----CCEEEEeCCchHHHHHHHHHHHHHhcCCC-ceEEEEeeeecCCCCCCCCCCCcCHHHHHH---
Confidence 456677777776 999999987788888888887666 3433 357899999976544446888888742211
Q ss_pred CCCCHHHHHHH
Q 012667 82 CTGDACCVMRL 92 (458)
Q Consensus 82 ~~~da~~v~~L 92 (458)
.=+..|..|
T Consensus 221 --~~~~~I~~i 229 (539)
T TIGR02477 221 --IYSELIGNI 229 (539)
T ss_pred --HHHHHHHHH
Confidence 225566666
No 42
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=20.44 E-value=1.4e+02 Score=19.11 Aligned_cols=20 Identities=15% Similarity=0.022 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHHHHHHHhcC
Q 012667 253 CSDDIRVCCSRAVDKLCERYG 273 (458)
Q Consensus 253 ~~~~v~~a~~~a~~~L~~~~G 273 (458)
-||||++++.-.+..|+.. |
T Consensus 21 ~DpdvqrgL~~ll~~lk~l-G 40 (42)
T PF07849_consen 21 RDPDVQRGLGFLLAFLKAL-G 40 (42)
T ss_pred cCHHHHHHHHHHHHHHHHH-c
Confidence 4899999999999999886 6
Done!