Query         012670
Match_columns 458
No_of_seqs    151 out of 1419
Neff          9.1 
Searched_HMMs 29240
Date          Mon Mar 25 13:57:39 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012670.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012670hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2xut_A Proton/peptide symporte  99.9 2.4E-21 8.2E-26  200.6  15.1  388   30-455   108-509 (524)
  2 4aps_A DI-OR tripeptide H+ sym  99.8 3.6E-20 1.2E-24  190.1  21.0  355   29-455   106-478 (491)
  3 1pw4_A Glycerol-3-phosphate tr  99.7 6.7E-17 2.3E-21  163.4  17.5  317   29-451   117-436 (451)
  4 3o7q_A L-fucose-proton symport  99.6 1.8E-14 6.1E-19  145.0  19.4  267   29-408   115-407 (438)
  5 2gfp_A EMRD, multidrug resista  99.5 1.9E-14 6.4E-19  142.1  10.6   83   30-118    87-169 (375)
  6 4gc0_A D-xylose-proton symport  99.3 5.1E-11 1.7E-15  121.7  14.5   84   28-117   123-214 (491)
  7 2cfq_A Lactose permease; trans  99.2 1.1E-11 3.7E-16  124.5   4.8  138  267-452   265-403 (417)
  8 1pw4_A Glycerol-3-phosphate tr  98.5 1.2E-06   4E-11   87.8  15.7  144  264-450    65-208 (451)
  9 3o7q_A L-fucose-proton symport  98.5 1.5E-06 5.2E-11   86.7  15.8  114  264-406    64-177 (438)
 10 4aps_A DI-OR tripeptide H+ sym  98.4 4.2E-06 1.4E-10   85.0  15.2  142  263-452    56-200 (491)
 11 2gfp_A EMRD, multidrug resista  98.3 2.2E-06 7.4E-11   83.9  10.6  134  264-445    38-171 (375)
 12 2xut_A Proton/peptide symporte  98.3 6.1E-06 2.1E-10   84.6  13.9  137  265-447    58-197 (524)
 13 4gc0_A D-xylose-proton symport  97.4  0.0054 1.9E-07   61.7  17.6   99  301-406    84-186 (491)
 14 2cfq_A Lactose permease; trans  97.0 0.00015 5.3E-09   72.0   0.7   89   30-124   311-400 (417)
 15 2l2t_A Receptor tyrosine-prote  30.4      51  0.0017   20.9   3.1   16  441-456    27-42  (44)
 16 2ks1_B Epidermal growth factor  29.8      52  0.0018   20.8   3.1   16  440-455    27-42  (44)

No 1  
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}
Probab=99.86  E-value=2.4e-21  Score=200.65  Aligned_cols=388  Identities=25%  Similarity=0.404  Sum_probs=218.1

Q ss_pred             hhHHHHHHHHHHHHhccCCcccchhhhccCCCCCChhhhhhcc---chhhHHHHHHHHHHHHHhHhhhhccccccchhhh
Q 012670           30 QYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKKG---SFFNWFYFSINIGALISSSLIVWIQDNAGWGLGF  106 (458)
Q Consensus        30 ~~~~~~~~l~l~g~g~g~~~p~~~a~v~d~~~~~~~~~~~~R~---~~~~~~~~~~niG~~igp~l~g~l~~~~gw~~~F  106 (458)
                      +.+.+++++++.|+|.|...|...+++.|++|+++      |+   ..+++++.+.++|..+||.+++++.++.|||+.|
T Consensus       108 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f  181 (524)
T 2xut_A          108 SVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSN------KSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAF  181 (524)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTT------TTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHH
T ss_pred             cHHHHHHHHHHHHHhccccchhHHHHHHHHcCccc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence            67788999999999999999999999999999876      64   4566699999999999999999999989999999


Q ss_pred             HHHHHHHHHHHHHHHhcCcceeecCCCCCchhhHHHHHHHHHHhhccccCCCcchhhhccchhhhccCCcccccCCccch
Q 012670          107 GIPALFMGFAIASFFSGTSLYRFQRPGGSPITRMCQVLVASFRKWNLEVPNDSTLLYETQDKASAIEGSRKIEHSDELRC  186 (458)
Q Consensus       107 ~i~~i~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (458)
                      ++.++..+++.+.+++.++..++++|++++..+..+......+++..+.+ ................   .+++.+...+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~  257 (524)
T 2xut_A          182 GIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALLTKVEGKG-NIGLVLALIGGVSAAY---ALVNIPTLGI  257 (524)
T ss_dssp             HHHHHHHHHHHHHHHSSSSSCCCCC--------------------CTTHH-HHHHHHHHHHHHHHHH---TGGGTTTTCS
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCCccchhHHHHHHHHHhhhhcccC-ccchhhhhhhhhhhhh---hhcccchhhh
Confidence            99988777776666555444333223222211111111111111000000 0000000000000000   0000000000


Q ss_pred             hhhhhc---cccccccCCCCCCCc-------ccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcCCC
Q 012670          187 LDKAAV---VSDAEIKSGDFSNPW-------ILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMVMDTSI  256 (458)
Q Consensus       187 ~~~~~~---~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  256 (458)
                      ......   ...+...    ..+|       +.++.++.++.|+......++.....++..+.+..+.+..+....+...
T Consensus       258 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (524)
T 2xut_A          258 VAGLCCAMVLVMGFVG----AGASLQLERARKSHPDAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDMVKPQ  333 (524)
T ss_dssp             SHHHHHHHHHHHHHHH----TGGGTHHHHSCCSCCSSSSTTTTTHHHHHHHHTTSHHHHTTTSSTTTHHHHHHHHSCCCS
T ss_pred             hhhhhhhhhhhhcccc----cchhhHHhhhhccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHhHHhcCCCe
Confidence            000000   0000000    0011       0011112233444444555566666667767776666666554443321


Q ss_pred             cCcccCcCccccchhhhHHHHHhhhhhhhhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 012670          257 GSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELV  336 (458)
Q Consensus       257 ~~~~~~~~~l~~ln~~~vi~~~pl~~~~~~~l~~r~~~~~~~~~~~~~~~~G~~l~~~g~~~~~~~~~~~~~~~~~~~~~  336 (458)
                        + .+.+.+..++.+..++..++.+++..+..+|++++   .++.+++.+|.++.+++++++...+..           
T Consensus       334 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~-----------  396 (524)
T 2xut_A          334 --W-FEPAMMQALNPLLVMLLIPFNNFVLYPAIERMGVK---LTALRKMGAGIAITGLSWIVVGTIQLM-----------  396 (524)
T ss_dssp             --S-SCHHHHHTTSGGGHHHHGGGTTTC---------------CCHHHHHTHHHHHHHHHHTTTTTTTT-----------
T ss_pred             --e-ecHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence              1 35566777888888899999998766666665333   566777888888888887776543210           


Q ss_pred             CCCCCccchhHHHHHHHHHHhHHHHHhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHhhHHhhhhhhhhccCCCcC
Q 012670          337 DQNVSVPISIFWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSFILTVVTYFTTAGGKTG  416 (458)
Q Consensus       337 ~~~~~~~~s~~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~~g~~~g~~~~~~~ig~~ig~~l~~~~~~~~~~~~~~~  416 (458)
                       .+.+...+.+++++.+++.++|+++..+..++++.+.+|++.||.++|+++....+|+.+|+.+.+.+.+...    .+
T Consensus       397 -~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~~~~----~~  471 (524)
T 2xut_A          397 -MDGGSALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKSPTV----TE  471 (524)
T ss_dssp             -TTTTCCCCSHHHHHHHHHHHHHHHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTSCHH----HH
T ss_pred             -hcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccc----cc
Confidence             0001124667788899999999999999999999999999999999999999999999999999997753210    01


Q ss_pred             CCCC-CCCCchhHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 012670          417 WIPD-NLNKGHLDYFFWLLAGLSIFNMLLYVVCAKKYKQK  455 (458)
Q Consensus       417 ~~~~-~~~~~~~~~~f~~~a~i~~~~~v~~~~~~~~~~~~  455 (458)
                      |.++ +.  +.....|++.+++++++.++++++.++++++
T Consensus       472 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (524)
T 2xut_A          472 QIVQTGM--SVTAFQMFFFAGFAILAAIVFALYARSYQMQ  509 (524)
T ss_dssp             HHHHHHS--CHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred             ccccccc--cccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            2100 00  1112337777888888888777776666543


No 2  
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=99.85  E-value=3.6e-20  Score=190.07  Aligned_cols=355  Identities=19%  Similarity=0.243  Sum_probs=222.3

Q ss_pred             chhHHHHHHHHHHHHhccCCcccchhhhccCCCCCChhhhhhccchhhHHHHHHHHHHHHHhHhhhhccccccchhhhHH
Q 012670           29 AQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKKGSFFNWFYFSINIGALISSSLIVWIQDNAGWGLGFGI  108 (458)
Q Consensus        29 ~~~~~~~~~l~l~g~g~g~~~p~~~a~v~d~~~~~~~~~~~~R~~~~~~~~~~~niG~~igp~l~g~l~~~~gw~~~F~i  108 (458)
                      .+.+.+++++++.|+|.|...|...++++|++|+++    ++|+.++++++.+.++|..+||.+++++.++.|||+.|++
T Consensus       106 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~----~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~  181 (491)
T 4aps_A          106 FGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHD----RRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSL  181 (491)
T ss_dssp             CSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCT----THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHhccchHHHHHHHHcCccc----ccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence            367888999999999999999999999999999876    2478899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCcceeec---CCCCC-chhhHHHHHHH-------------HHHhhccccCCCcchhhhccchhhh
Q 012670          109 PALFMGFAIASFFSGTSLYRFQ---RPGGS-PITRMCQVLVA-------------SFRKWNLEVPNDSTLLYETQDKASA  171 (458)
Q Consensus       109 ~~i~~~l~~ii~~~~~~~~~~~---~~~~~-~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~  171 (458)
                      .++..+++++.+++..++..++   +|++. ...+..+....             ...... ....+ .           
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~-~~~~~-~-----------  248 (491)
T 4aps_A          182 AAIGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVG-WNSLP-A-----------  248 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCSCCSCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHS-SCCTT-H-----------
T ss_pred             HHHHHHHHHHHHHHhCcccccccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhcc-Ccccc-c-----------
Confidence            9887777776655443322211   11111 11111111000             000000 00000 0           


Q ss_pred             ccCCcccccCCccchhhhhhccccccccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHh
Q 012670          172 IEGSRKIEHSDELRCLDKAAVVSDAEIKSGDFSNPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMV  251 (458)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~  251 (458)
                               ..  ...............    ...++. +.....++++..+...++.....++..+.+..+.+..+..+
T Consensus       249 ---------~~--~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (491)
T 4aps_A          249 ---------YI--NLLTIVAIAIPVFYF----AWMISS-VKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAE  312 (491)
T ss_dssp             ---------HH--HHHHHHHHHHHHHHH----HHHC-------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHH
T ss_pred             ---------ch--hhhhHHHHHHHHHHH----HHHhhc-ccccHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence                     00  000000000000000    000000 00011233444445556666777788877777665444322


Q ss_pred             -hcCCCcCcccCcCccccchhhhHHHHHhhhhhhhhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012670          252 -MDTSIGSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLA  330 (458)
Q Consensus       252 -~~~~~~~~~~~~~~l~~ln~~~vi~~~pl~~~~~~~l~~r~~~~~~~~~~~~~~~~G~~l~~~g~~~~~~~~~~~~~~~  330 (458)
                       .+..    ....+.+..++.+..++..++.+++.+    |.++|.  ....+++.+|.++.++++.++.......    
T Consensus       313 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~----r~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  378 (491)
T 4aps_A          313 RVDSS----WFPVSWFQSLNPLFIMLYTPFFAWLWT----AWKKNQ--PSSPTKFAVGLMFAGLSFLLMAIPGALY----  378 (491)
T ss_dssp             SCCCS----SSCSGGGTTHHHHHHHHHHHHHHHHHH----HTTTC-----CHHHHHHHHHHHHHHHTTTHHHHHHC----
T ss_pred             HhccC----ccCHHHHhccchHHHHHHHHHHHHHHH----HHhccC--CCchHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence             2211    245677788888888888888888544    433221  4556778899999999988877654210    


Q ss_pred             hhhcccCCCCCccchhHHHHHHHHHHhHHHHHhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHhhHHhhhhhhhhc
Q 012670          331 RELELVDQNVSVPISIFWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSFILTVVTYFTT  410 (458)
Q Consensus       331 ~~~~~~~~~~~~~~s~~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~~g~~~g~~~~~~~ig~~ig~~l~~~~~~~~~  410 (458)
                              +++...+.+++++.+++.++|+++..+..++++.+..|++.||.++|+++....+|+.+++.+.+.+.+   
T Consensus       379 --------~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~---  447 (491)
T 4aps_A          379 --------GTSGKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNA---  447 (491)
T ss_dssp             --------CCCTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGG---
T ss_pred             --------CCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence                    001124677888899999999999999999999999999999999999999999999999999887642   


Q ss_pred             cCCCcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 012670          411 AGGKTGWIPDNLNKGHLDYFFWLLAGLSIFNMLLYVVCAKKYKQK  455 (458)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~f~~~a~i~~~~~v~~~~~~~~~~~~  455 (458)
                                    .++...|...++++++..++.++..++.+++
T Consensus       448 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  478 (491)
T 4aps_A          448 --------------KSEVAYFSYFGLGSVVLGIVLVFLSKRIQGL  478 (491)
T ss_dssp             --------------SSTTHHHHHTHHHHHHHHHHHHHC-------
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                          1234567788888888887777766666543


No 3  
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=99.73  E-value=6.7e-17  Score=163.36  Aligned_cols=317  Identities=14%  Similarity=0.063  Sum_probs=184.7

Q ss_pred             chhHHHHHHHHHHHHhccCCcccchhhhccCCCCCChhhhhhccchhhHHHHHHHHHHHHHhHhhhhcccccc-chhhhH
Q 012670           29 AQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKKGSFFNWFYFSINIGALISSSLIVWIQDNAG-WGLGFG  107 (458)
Q Consensus        29 ~~~~~~~~~l~l~g~g~g~~~p~~~a~v~d~~~~~~~~~~~~R~~~~~~~~~~~niG~~igp~l~g~l~~~~g-w~~~F~  107 (458)
                      .+.+.+++++++.|+|.|...|...+++.|++++++      |+++++++..+.++|..+||.+++++.+..| ||+.|+
T Consensus       117 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~  190 (451)
T 1pw4_A          117 SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALY  190 (451)
T ss_dssp             SSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTH------HHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTH
T ss_pred             ccHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence            366788999999999999999999999999999876      9999999999999999999999999888898 999999


Q ss_pred             HHHHHHHHHHHHHHhcCcceeecCCCCCchhhHHHHHHHHHHhhccccCCCcchhhhccchhhhccCCcccccCCccchh
Q 012670          108 IPALFMGFAIASFFSGTSLYRFQRPGGSPITRMCQVLVASFRKWNLEVPNDSTLLYETQDKASAIEGSRKIEHSDELRCL  187 (458)
Q Consensus       108 i~~i~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (458)
                      +.++..++..++.++..++    +|+.....               +....+.. .. ++.        ..+..++..+.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~---------------~~~~~~~~-~~-~~~--------~~~~~~~~~~~  241 (451)
T 1pw4_A          191 MPAFCAILVALFAFAMMRD----TPQSCGLP---------------PIEEYKND-YP-DDY--------NEKAEQELTAK  241 (451)
T ss_dssp             HHHHHHHHHHHHHHHHCCC----SSTTTCCC---------------SCTTTCCC-----------------------CCT
T ss_pred             HHHHHHHHHHHHHHhhccC----CHhhcCCC---------------Chhhhccc-cc-ccc--------hhhhhcccccc
Confidence            9887666555443333322    11110000               00000000 00 000        00000000000


Q ss_pred             hhhhccccccccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcCCCcCcccCcCccc
Q 012670          188 DKAAVVSDAEIKSGDFSNPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMSTLFVEQGMVMDTSIGSFTIPPASLS  267 (458)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~l~  267 (458)
                      +..                     .+.....+.+   ..+.......+..+......+.   .+.....+.-....+.+.
T Consensus       242 ~~~---------------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~  294 (451)
T 1pw4_A          242 QIF---------------------MQYVLPNKLL---WYIAIANVFVYLLRYGILDWSP---TYLKEVKHFALDKSSWAY  294 (451)
T ss_dssp             HHH---------------------HHHTSSCHHH---HHHHHHHHHHHHHHHHHHHHHH---HHBTTBSCCCHHHHHHHH
T ss_pred             cch---------------------HHHHHcCHHH---HHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCCCHHHHHHHH
Confidence            000                     0000001111   1111222222222222222221   222221211111123334


Q ss_pred             cchhhhHHHHHhhhhhhhhhhhhcccCCCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhcccCCCCCccchh
Q 012670          268 SFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSV-LCMSAAAVVEINRLRLARELELVDQNVSVPISI  346 (458)
Q Consensus       268 ~ln~~~vi~~~pl~~~~~~~l~~r~~~~~~~~~~~~~~~~G~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  346 (458)
                      .+..+..++..++..+    +.+|..+     ++++.+.++.++.. ++++.+....                   ..+.
T Consensus       295 ~~~~~~~~~~~~~~g~----l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~  346 (451)
T 1pw4_A          295 FLYEYAGIPGTLLCGW----MSDKVFR-----GNRGATGVFFMTLVTIATIVYWMNP-------------------AGNP  346 (451)
T ss_dssp             HHHHHHHHHHHHHHHH----HHHHTST-----TCHHHHHHHHHHHHHHHHHHTTSCC-------------------TTCH
T ss_pred             HHHHHHHHHHHHHHHH----HHHHHhc-----CCchhHHHHHHHHHHHHHHHHHHhc-------------------ccCH
Confidence            4444444555555555    4444300     22344455554444 5554443311                   1245


Q ss_pred             HHHHHHHHHHhHHHHHhhhhhhhhhhcccchhhHHHHHHHHHHHHHH-HHHHhhHHhhhhhhhhccCCCcCCCCCCCCCc
Q 012670          347 FWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSALSLLTTAL-GNYLSSFILTVVTYFTTAGGKTGWIPDNLNKG  425 (458)
Q Consensus       347 ~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~~g~~~g~~~~~~~i-g~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~  425 (458)
                      +......++.+++.....+...+++.+..|++.||.++|+.+....+ |..+++.+.+.+.+..                
T Consensus       347 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~----------------  410 (451)
T 1pw4_A          347 TVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF----------------  410 (451)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS----------------
T ss_pred             HHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------
Confidence            56667788888988888899999999999999999999999999999 9999999999876321                


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhc
Q 012670          426 HLDYFFWLLAGLSIFNMLLYVVCAKK  451 (458)
Q Consensus       426 ~~~~~f~~~a~i~~~~~v~~~~~~~~  451 (458)
                      ++...|.+.+++++++.++.++..++
T Consensus       411 g~~~~~~~~~~~~~~~~~~~~~~~~~  436 (451)
T 1pw4_A          411 GWDGGFMVMIGGSILAVILLIVVMIG  436 (451)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            24566777787777777766655443


No 4  
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=99.61  E-value=1.8e-14  Score=145.03  Aligned_cols=267  Identities=10%  Similarity=0.054  Sum_probs=159.3

Q ss_pred             chhHHHHHHHHHHHHhccCCcccchhhhccCCCCCChhhhhhccchhhHHHHHHHHHHHHHhHhhhhcc-cccc------
Q 012670           29 AQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKKGSFFNWFYFSINIGALISSSLIVWIQ-DNAG------  101 (458)
Q Consensus        29 ~~~~~~~~~l~l~g~g~g~~~p~~~a~v~d~~~~~~~~~~~~R~~~~~~~~~~~niG~~igp~l~g~l~-~~~g------  101 (458)
                      .+.+.+++++++.|+|.|...|...+++.|++|+++      |+++++++....++|..+||.+++++. +..+      
T Consensus       115 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~  188 (438)
T 3o7q_A          115 MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDV  188 (438)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTT------HHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHH
T ss_pred             ccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchh------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence            468889999999999999999999999999999887      999999999999999999999999998 5555      


Q ss_pred             -------------------chhhhHHHHHHHHHHHHHHHhcCcceeecCCCCCchhhHHHHHHHHHHhhccccCCCcchh
Q 012670          102 -------------------WGLGFGIPALFMGFAIASFFSGTSLYRFQRPGGSPITRMCQVLVASFRKWNLEVPNDSTLL  162 (458)
Q Consensus       102 -------------------w~~~F~i~~i~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (458)
                                         ||+.|++.+...++..+.+++.+.  ++.+++.++                     +    
T Consensus       189 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~---------------------~----  241 (438)
T 3o7q_A          189 LDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKF--PALQSDNHS---------------------D----  241 (438)
T ss_dssp             HHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCTTTCCC---------------------C----
T ss_pred             cccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcC--Ccccccccc---------------------c----
Confidence                               999998877655554444433221  010000000                     0    


Q ss_pred             hhccchhhhccCCcccccCCccchhhhhhccccccccCCCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 012670          163 YETQDKASAIEGSRKIEHSDELRCLDKAAVVSDAEIKSGDFSNPWILCTVTQVEELKILIRMFPIWATGIVFSAVYAQMS  242 (458)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~  242 (458)
                                        .++.+..+..                      ++....+.+....   .....+...+....
T Consensus       242 ------------------~~~~~~~~~~----------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~  278 (438)
T 3o7q_A          242 ------------------AKQGSFSASL----------------------SRLARIRHWRWAV---LAQFCYVGAQTACW  278 (438)
T ss_dssp             ------------------SSTTSHHHHH----------------------HHHTTCSHHHHHH---HHHHHHHHHHHHHH
T ss_pred             ------------------ccccchhhhH----------------------HHHHhChHHHHHH---HHHHHHHHHHHHHH
Confidence                              0000000000                      0000001111111   11111111111111


Q ss_pred             hhHHHHHHhhcCCCcCcccCcCccccchhhhHHHHHhhhhhhhhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 012670          243 TLFVEQGMVMDTSIGSFTIPPASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVV  322 (458)
Q Consensus       243 s~~~~~~~~~~~~~~~~~~~~~~l~~ln~~~vi~~~pl~~~~~~~l~~r~~~~~~~~~~~~~~~~G~~l~~~g~~~~~~~  322 (458)
                      +.+....  .+..++-.....+.+..+..+..++..++..+    +.+|       .++++.+.++.++.++++++....
T Consensus       279 ~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~----l~~r-------~~~~~~~~~~~~~~~~~~~~~~~~  345 (438)
T 3o7q_A          279 SYLIRYA--VEEIPGMTAGFAANYLTGTMVCFFIGRFTGTW----LISR-------FAPHKVLAAYALIAMALCLISAFA  345 (438)
T ss_dssp             HHHHHHH--HHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHH-------SCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHh--hhccCCcchhHHHHHHHHHHHHHHHHHHHHHH----HHHH-------hcchHHHHHHHHHHHHHHHHHHHc
Confidence            1111110  11111100112223333444444455555555    4454       333456677777777776665543


Q ss_pred             HHHHHHHHhhhcccCCCCCccchhHHHHHHHHHHhHHHHHhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHhhHHh
Q 012670          323 EINRLRLARELELVDQNVSVPISIFWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSFIL  402 (458)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~~g~~~g~~~~~~~ig~~ig~~l~  402 (458)
                                            +..+.+...++.+++.....|...+++.+..|++ ++..+++.. ...+|+.+++.+.
T Consensus       346 ----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~  401 (438)
T 3o7q_A          346 ----------------------GGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVM  401 (438)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHH
T ss_pred             ----------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHH
Confidence                                  2223445668888999999999999999999977 888888877 6779999999999


Q ss_pred             hhhhhh
Q 012670          403 TVVTYF  408 (458)
Q Consensus       403 ~~~~~~  408 (458)
                      +.+.+.
T Consensus       402 g~l~~~  407 (438)
T 3o7q_A          402 GFVSDA  407 (438)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            987643


No 5  
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=99.53  E-value=1.9e-14  Score=142.07  Aligned_cols=83  Identities=11%  Similarity=0.106  Sum_probs=75.6

Q ss_pred             hhHHHHHHHHHHHHhccCCcccchhhhccCCCCCChhhhhhccchhhHHHHHHHHHHHHHhHhhhhccccccchhhhHHH
Q 012670           30 QYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKKGSFFNWFYFSINIGALISSSLIVWIQDNAGWGLGFGIP  109 (458)
Q Consensus        30 ~~~~~~~~l~l~g~g~g~~~p~~~a~v~d~~~~~~~~~~~~R~~~~~~~~~~~niG~~igp~l~g~l~~~~gw~~~F~i~  109 (458)
                      +.+.+++.+++.|++.+...|...+++.|++|+++      |+++++++....++|..+||.+++++.++.|||+.|++.
T Consensus        87 ~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~  160 (375)
T 2gfp_A           87 SLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQ------LRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFL  160 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS------CCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHH
Confidence            67788899999999999999999999999998877      999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHH
Q 012670          110 ALFMGFAIA  118 (458)
Q Consensus       110 ~i~~~l~~i  118 (458)
                      ++..++..+
T Consensus       161 ~~~~~~~~~  169 (375)
T 2gfp_A          161 LVLCAGVTF  169 (375)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHHH
Confidence            875555443


No 6  
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=99.25  E-value=5.1e-11  Score=121.66  Aligned_cols=84  Identities=15%  Similarity=0.216  Sum_probs=69.8

Q ss_pred             CchhHHHHHHHHHHHHhccCCcccchhhhccCCCCCChhhhhhccchhhHHHHHHHHHHHHHhHhhhhcccc--------
Q 012670           28 PAQYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKKGSFFNWFYFSINIGALISSSLIVWIQDN--------   99 (458)
Q Consensus        28 ~~~~~~~~~~l~l~g~g~g~~~p~~~a~v~d~~~~~~~~~~~~R~~~~~~~~~~~niG~~igp~l~g~l~~~--------   99 (458)
                      ..+.+.++++|++.|+|.|+..+...++++|..|+++      |++..+++..+..+|.++++.++..+...        
T Consensus       123 a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p~~~------rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  196 (491)
T 4gc0_A          123 AGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHI------RGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNT  196 (491)
T ss_dssp             GGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGG------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTT
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHh------hhhhHHhhhhhhhhhhhhhhhcchhhccccccccccc
Confidence            3478899999999999999999999999999999887      99999999999999999999888766543        


Q ss_pred             ccchhhhHHHHHHHHHHH
Q 012670          100 AGWGLGFGIPALFMGFAI  117 (458)
Q Consensus       100 ~gw~~~F~i~~i~~~l~~  117 (458)
                      .+||+.+.+..+..++.+
T Consensus       197 ~~~~~~~~~~~~~~~~~~  214 (491)
T 4gc0_A          197 DGWRYMFASECIPALLFL  214 (491)
T ss_dssp             THHHHHHHTTHHHHHHHH
T ss_pred             hhhHHHhhhhhhhhhhhh
Confidence            357777766655444333


No 7  
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=99.17  E-value=1.1e-11  Score=124.50  Aligned_cols=138  Identities=7%  Similarity=-0.055  Sum_probs=93.2

Q ss_pred             ccchhhhHHHHHhhhhhhhhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccchh
Q 012670          267 SSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVSVPISI  346 (458)
Q Consensus       267 ~~ln~~~vi~~~pl~~~~~~~l~~r~~~~~~~~~~~~~~~~G~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  346 (458)
                      ..++.+..++...+..+    +.+|.       .+++.+.++.++.++++..+...                     .+.
T Consensus       265 ~~~~~~~~~~~~~~~g~----l~dr~-------g~~~~l~~~~~~~~~~~~~~~~~---------------------~~~  312 (417)
T 2cfq_A          265 TTMGELLNASIMFFAPL----IINRI-------GGKNALLLAGTIMSVRIIGSSFA---------------------TSA  312 (417)
T ss_dssp             HHHHHHHHHHHHHHHHH----HHHHH-------CHHHHHHHHHHHHHHHHHHHTTC---------------------CSH
T ss_pred             HHHHHHHHHHHHHHHHH----HHHHh-------cHHHHHHHHHHHHHHHHHHHHHh---------------------ccH
Confidence            33444444444555555    44443       23345666777766665554321                     244


Q ss_pred             HHHHHHHHHHhHHHHHhhhhhhhhhhcccchhhHHHHHHH-HHHHHHHHHHHhhHHhhhhhhhhccCCCcCCCCCCCCCc
Q 012670          347 FWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSAL-SLLTTALGNYLSSFILTVVTYFTTAGGKTGWIPDNLNKG  425 (458)
Q Consensus       347 ~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~~g~~~g~-~~~~~~ig~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~  425 (458)
                      +++++...+.+++.....+....++.+..|++.||...+. ++..+.+|+.+++.+.+.+.+.                .
T Consensus       313 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~----------------~  376 (417)
T 2cfq_A          313 LEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYES----------------I  376 (417)
T ss_dssp             HHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHH----------------S
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHh----------------c
Confidence            5566666777888777778888999999999999999998 5888999999999999976531                1


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012670          426 HLDYFFWLLAGLSIFNMLLYVVCAKKY  452 (458)
Q Consensus       426 ~~~~~f~~~a~i~~~~~v~~~~~~~~~  452 (458)
                      ++...|.+.+++++++.++.++..++.
T Consensus       377 g~~~~f~~~~~~~l~~~~~~~~~~~~~  403 (417)
T 2cfq_A          377 GFQGAYLVLGLVALGFTLISVFTLSGP  403 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSSCCS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence            255668888888888777766555443


No 8  
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=98.54  E-value=1.2e-06  Score=87.77  Aligned_cols=144  Identities=14%  Similarity=0.041  Sum_probs=104.3

Q ss_pred             CccccchhhhHHHHHhhhhhhhhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcc
Q 012670          264 ASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVSVP  343 (458)
Q Consensus       264 ~~l~~ln~~~vi~~~pl~~~~~~~l~~r~~~~~~~~~~~~~~~~G~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (458)
                      +++..+..+...+..++.++    +.+|       ..+++.+.++.++.+++.++..+....                 .
T Consensus        65 g~~~~~~~~~~~~~~~~~G~----l~dr-------~g~r~~l~~~~~~~~~~~~~~~~~~~~-----------------~  116 (451)
T 1pw4_A           65 GFALSGISIAYGFSKFIMGS----VSDR-------SNPRVFLPAGLILAAAVMLFMGFVPWA-----------------T  116 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH----HHHH-------SCHHHHHHHHHHHHHHHHHHHHHCHHH-----------------H
T ss_pred             HHHHHHHHHHHHHHHHhHHH----HHHh-------cCchHHHHHHHHHHHHHHHHHHhhhhc-----------------c
Confidence            34445555555566666666    4555       334467788888888888887762110                 0


Q ss_pred             chhHHHHHHHHHHhHHHHHhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHhhHHhhhhhhhhccCCCcCCCCCCCC
Q 012670          344 ISIFWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSFILTVVTYFTTAGGKTGWIPDNLN  423 (458)
Q Consensus       344 ~s~~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~~g~~~g~~~~~~~ig~~ig~~l~~~~~~~~~~~~~~~~~~~~~~  423 (458)
                      .+++++++..++.|+|.+...+...+++.+..|++.|+..+|++.....+|..+++.+.+.+.+..+     +|      
T Consensus       117 ~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----~w------  185 (451)
T 1pw4_A          117 SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN-----DW------  185 (451)
T ss_dssp             SSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTC-----CS------
T ss_pred             ccHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cH------
Confidence            2677788899999999999999999999999999999999999999999999999999987543210     13      


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHhhh
Q 012670          424 KGHLDYFFWLLAGLSIFNMLLYVVCAK  450 (458)
Q Consensus       424 ~~~~~~~f~~~a~i~~~~~v~~~~~~~  450 (458)
                          ...|.+.++++++..++.++..+
T Consensus       186 ----~~~f~~~~~~~~~~~~~~~~~~~  208 (451)
T 1pw4_A          186 ----HAALYMPAFCAILVALFAFAMMR  208 (451)
T ss_dssp             ----TTCTHHHHHHHHHHHHHHHHHCC
T ss_pred             ----HHHHHHHHHHHHHHHHHHHhhcc
Confidence                34466666666666655544433


No 9  
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=98.52  E-value=1.5e-06  Score=86.71  Aligned_cols=114  Identities=13%  Similarity=0.068  Sum_probs=89.7

Q ss_pred             CccccchhhhHHHHHhhhhhhhhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcc
Q 012670          264 ASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVSVP  343 (458)
Q Consensus       264 ~~l~~ln~~~vi~~~pl~~~~~~~l~~r~~~~~~~~~~~~~~~~G~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (458)
                      +++.....+...+..++.++    +.+|       ..+++.+.++.++.+++.++......                  .
T Consensus        64 g~~~~~~~~~~~i~~~~~G~----l~dr-------~g~r~~l~~~~~~~~~~~~~~~~~~~------------------~  114 (438)
T 3o7q_A           64 GLIQSAFYFGYFIIPIPAGI----LMKK-------LSYKAGIITGLFLYALGAALFWPAAE------------------I  114 (438)
T ss_dssp             HHHHHHHHHHHHTTHHHHHH----HHHH-------SCHHHHHHHHHHHHHHHHHHHHHHHH------------------T
T ss_pred             HHHHHHHHHHHHHHHHhHHH----HHHH-------hcchHHHHHHHHHHHHHHHHHHhccc------------------c
Confidence            33444455555566666666    4555       34446788898888888887743211                  1


Q ss_pred             chhHHHHHHHHHHhHHHHHhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 012670          344 ISIFWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSFILTVVT  406 (458)
Q Consensus       344 ~s~~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~~g~~~g~~~~~~~ig~~ig~~l~~~~~  406 (458)
                      .+.+.+++..++.|+|.+...+...+++.+..|++.|+..+++.+...++|..+++.+.+.+.
T Consensus       115 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~  177 (438)
T 3o7q_A          115 MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI  177 (438)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred             ccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            377888889999999999999999999999999999999999999999999999999998775


No 10 
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=98.39  E-value=4.2e-06  Score=85.01  Aligned_cols=142  Identities=15%  Similarity=0.038  Sum_probs=106.1

Q ss_pred             cCccccchhhhHHHHHhhhhhhhhhhhhc-ccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 012670          263 PASLSSFDVISVIFWVPIYDKIIVPIARK-FTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVS  341 (458)
Q Consensus       263 ~~~l~~ln~~~vi~~~pl~~~~~~~l~~r-~~~~~~~~~~~~~~~~G~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (458)
                      .+++.....+...+..++.++    +.+| ++       +++.+.++.++.+++.++....                   
T Consensus        56 ~~~~~~~~~~~~~~~~~~~g~----l~dr~~g-------~r~~~~~~~~~~~~~~~~~~~~-------------------  105 (491)
T 4aps_A           56 AASIMAIYASMVYLSGTIGGF----VADRIIG-------ARPAVFWGGVLIMLGHIVLALP-------------------  105 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH----HHHHTSC-------HHHHHHHHHHHHHHHHHHHHSC-------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHH----HHhcccc-------chHHHHHHHHHHHHHHHHHHHh-------------------
Confidence            344555566666677777777    4455 22       2356778888888887776542                   


Q ss_pred             ccchhHHHHHHHHHHhHHHHHhhhhhhhhhhcccchhh--HHHHHHHHHHHHHHHHHHhhHHhhhhhhhhccCCCcCCCC
Q 012670          342 VPISIFWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAM--RSLCSALSLLTTALGNYLSSFILTVVTYFTTAGGKTGWIP  419 (458)
Q Consensus       342 ~~~s~~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~--~g~~~g~~~~~~~ig~~ig~~l~~~~~~~~~~~~~~~~~~  419 (458)
                        .+.+++++..++.|+|.+...|...+++.+..|++.  |+...+.++...++|..+++.+.+.+.+..          
T Consensus       106 --~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------  173 (491)
T 4aps_A          106 --FGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAA----------  173 (491)
T ss_dssp             --CSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS----------
T ss_pred             --hhHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhh----------
Confidence              367778889999999999999999999999999988  888889899999999999999999875321          


Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 012670          420 DNLNKGHLDYFFWLLAGLSIFNMLLYVVCAKKY  452 (458)
Q Consensus       420 ~~~~~~~~~~~f~~~a~i~~~~~v~~~~~~~~~  452 (458)
                            ++...|.+.+++.+++.+.+++..++.
T Consensus       174 ------g~~~~f~~~~~~~~~~~~~~~~~~~~~  200 (491)
T 4aps_A          174 ------GYHVAFSLAAIGMFIGLLVYYFGGKKT  200 (491)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence                  245667777777777776666555544


No 11 
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=98.31  E-value=2.2e-06  Score=83.89  Aligned_cols=134  Identities=11%  Similarity=0.030  Sum_probs=99.0

Q ss_pred             CccccchhhhHHHHHhhhhhhhhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcc
Q 012670          264 ASLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVSVP  343 (458)
Q Consensus       264 ~~l~~ln~~~vi~~~pl~~~~~~~l~~r~~~~~~~~~~~~~~~~G~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (458)
                      +++.....+...+..++..+    +.+|.++|       +.+..+.++.+++.......+                    
T Consensus        38 g~~~~~~~~~~~~~~~~~g~----l~dr~g~r-------~~~~~~~~~~~~~~~~~~~~~--------------------   86 (375)
T 2gfp_A           38 QSVMGAYLLTYGVSQLFYGP----ISDRVGRR-------PVILVGMSIFMLATLVAVTTS--------------------   86 (375)
T ss_dssp             HHHHHHHHHHHHHHHTTHHH----HHTTSCCC-------CCCHHHHHHHHHHHHHHHHHH--------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHH----HHHHhCCc-------hhHHHHHHHHHHHHHHHHHhc--------------------
Confidence            34455555555666666666    45554332       345577777777777776643                    


Q ss_pred             chhHHHHHHHHHHhHHHHHhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHhhHHhhhhhhhhccCCCcCCCCCCCC
Q 012670          344 ISIFWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSFILTVVTYFTTAGGKTGWIPDNLN  423 (458)
Q Consensus       344 ~s~~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~~g~~~g~~~~~~~ig~~ig~~l~~~~~~~~~~~~~~~~~~~~~~  423 (458)
                       +.+.++...++.|++.+...+...+++.+..|++.|+..++..+....+|..+++.+.+.+.+.               
T Consensus        87 -~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~---------------  150 (375)
T 2gfp_A           87 -SLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTM---------------  150 (375)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCH---------------
T ss_pred             -cHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh---------------
Confidence             6677888999999999999999999999999999999999999999999999999999876421               


Q ss_pred             CchhHHHHHHHHHHHHHHHHHH
Q 012670          424 KGHLDYFFWLLAGLSIFNMLLY  445 (458)
Q Consensus       424 ~~~~~~~f~~~a~i~~~~~v~~  445 (458)
                       .++...|.+.+++.++..+..
T Consensus       151 -~~~~~~~~~~~~~~~~~~~~~  171 (375)
T 2gfp_A          151 -WNWRACYLFLLVLCAGVTFSM  171 (375)
T ss_dssp             -HHHHHHHHHHHHHHHHHHCCC
T ss_pred             -ccHHHHHHHHHHHHHHHHHHH
Confidence             124556666666666555533


No 12 
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}
Probab=98.29  E-value=6.1e-06  Score=84.57  Aligned_cols=137  Identities=17%  Similarity=0.126  Sum_probs=97.5

Q ss_pred             ccccchhhhHHHHHhhhhhhhhhhhhcccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccc
Q 012670          265 SLSSFDVISVIFWVPIYDKIIVPIARKFTGKERGFSELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQNVSVPI  344 (458)
Q Consensus       265 ~l~~ln~~~vi~~~pl~~~~~~~l~~r~~~~~~~~~~~~~~~~G~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (458)
                      ++..+..+..++..++..+    +.+|+      ..+++.+.++.++.+++.++.....                    .
T Consensus        58 ~~~~~~~~~~~~~~~~~G~----l~dr~------~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~  107 (524)
T 2xut_A           58 DVFHSFVIGVYFFPLLGGW----IADRF------FGKYNTILWLSLIYCVGHAFLAIFE--------------------H  107 (524)
T ss_dssp             HHHHHHHHHHHHTHHHHHH----HHTTS------SCSHHHHHHHHHHHHHHHHHHHHTS--------------------S
T ss_pred             HHHHHHHHHHHHHHHHHHH----HHHHH------hcchHHHHHHHHHHHHHHHHHHHhc--------------------c
Confidence            3344444445555566665    44443      0444667788888888877766531                    1


Q ss_pred             hhHHHHHHHHHHhHHHHHhhhhhhhhhhcccchhhHHHHHHH---HHHHHHHHHHHhhHHhhhhhhhhccCCCcCCCCCC
Q 012670          345 SIFWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSAL---SLLTTALGNYLSSFILTVVTYFTTAGGKTGWIPDN  421 (458)
Q Consensus       345 s~~~li~~~~l~g~ge~l~~~~~~~~~~~~aP~~~~g~~~g~---~~~~~~ig~~ig~~l~~~~~~~~~~~~~~~~~~~~  421 (458)
                      +.+++++..++.|+|++...|...+++.+..|++.|+...+.   ++...++|..+|+.+.+.+.+.             
T Consensus       108 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------------  174 (524)
T 2xut_A          108 SVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKN-------------  174 (524)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHT-------------
T ss_pred             cHHHHHHHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------
Confidence            567778889999999999999999999999999999877666   8899999999999988876531             


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHH
Q 012670          422 LNKGHLDYFFWLLAGLSIFNMLLYVV  447 (458)
Q Consensus       422 ~~~~~~~~~f~~~a~i~~~~~v~~~~  447 (458)
                         .++...|.+.+++.++..+.+++
T Consensus       175 ---~g~~~~f~~~~~~~~~~~~~~~~  197 (524)
T 2xut_A          175 ---FGAAVAFGIPGVLMFVATVFFWL  197 (524)
T ss_dssp             ---SCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHHH
Confidence               12456677777766666555544


No 13 
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=97.39  E-value=0.0054  Score=61.69  Aligned_cols=99  Identities=10%  Similarity=0.088  Sum_probs=73.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCC----CCccchhHHHHHHHHHHhHHHHHhhhhhhhhhhcccc
Q 012670          301 ELQRMGIGLFLSVLCMSAAAVVEINRLRLARELELVDQN----VSVPISIFWQIPQYFLLGAAEVCTFIGQLEFFYDQSP  376 (458)
Q Consensus       301 ~~~~~~~G~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~li~~~~l~g~ge~l~~~~~~~~~~~~aP  376 (458)
                      +++.+.++.++..++-++.++....       .......    .....+++.+++..+++|+|++...+....++.+.+|
T Consensus        84 Rk~~l~~~~~l~~i~~i~~a~~~~~-------~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p  156 (491)
T 4gc0_A           84 RRDSLKIAAVLFFISGVGSAWPELG-------FTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAP  156 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTTT-------TSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhh-------hhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            3366778888877776666532100       0000000    0012367788899999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 012670          377 DAMRSLCSALSLLTTALGNYLSSFILTVVT  406 (458)
Q Consensus       377 ~~~~g~~~g~~~~~~~ig~~ig~~l~~~~~  406 (458)
                      ++.||...++.+....+|..++..+.....
T Consensus       157 ~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~  186 (491)
T 4gc0_A          157 AHIRGKLVSFNQFAIIFGQLLVYCVNYFIA  186 (491)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhHHhhhhhhhhhhhhhhhcchhhc
Confidence            999999999999999999999888777654


No 14 
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=96.96  E-value=0.00015  Score=72.01  Aligned_cols=89  Identities=10%  Similarity=-0.038  Sum_probs=70.0

Q ss_pred             hhHHHHHHHHHHHHhccCCcccchhhhccCCCCCChhhhhhccchhhH-HHHHHHHHHHHHhHhhhhccccccchhhhHH
Q 012670           30 QYAVFFFGLYLIALGTGGIKPCVSSFGADQFDDTDSNERVKKGSFFNW-FYFSINIGALISSSLIVWIQDNAGWGLGFGI  108 (458)
Q Consensus        30 ~~~~~~~~l~l~g~g~g~~~p~~~a~v~d~~~~~~~~~~~~R~~~~~~-~~~~~niG~~igp~l~g~l~~~~gw~~~F~i  108 (458)
                      +.+.+++...+.+++.+...+...+.+.|.+|++.      |++++++ +..+.++|..+||.++|++.++.||+..|.+
T Consensus       311 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~  384 (417)
T 2cfq_A          311 SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRF------SATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLV  384 (417)
T ss_dssp             SHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHH------HHHHHHHHHTTTHHHHHHHHTHHHHTHHHHSHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHhHHHHHhhhhHHHHHHhcCcHHHHHH
Confidence            34555566666777766666777889999998765      8999998 5778889999999999999998899999998


Q ss_pred             HHHHHHHHHHHHHhcC
Q 012670          109 PALFMGFAIASFFSGT  124 (458)
Q Consensus       109 ~~i~~~l~~ii~~~~~  124 (458)
                      .++..+++.++.+...
T Consensus       385 ~~~~~l~~~~~~~~~~  400 (417)
T 2cfq_A          385 LGLVALGFTLISVFTL  400 (417)
T ss_dssp             HHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHHHhhh
Confidence            8877777766554433


No 15 
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=30.38  E-value=51  Score=20.85  Aligned_cols=16  Identities=25%  Similarity=0.276  Sum_probs=6.8

Q ss_pred             HHHHHHHhhhcccccc
Q 012670          441 NMLLYVVCAKKYKQKK  456 (458)
Q Consensus       441 ~~v~~~~~~~~~~~~~  456 (458)
                      ....++++-+|.++++
T Consensus        27 ~~~~~~~~RRRr~~~k   42 (44)
T 2l2t_A           27 GLTFAVYVRRKSIKKK   42 (44)
T ss_dssp             HHHHHHHHHTTCSSCC
T ss_pred             HHHHHHHhhhhhhhhc
Confidence            3333444444444443


No 16 
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=29.81  E-value=52  Score=20.79  Aligned_cols=16  Identities=0%  Similarity=-0.004  Sum_probs=6.3

Q ss_pred             HHHHHHHHhhhccccc
Q 012670          440 FNMLLYVVCAKKYKQK  455 (458)
Q Consensus       440 ~~~v~~~~~~~~~~~~  455 (458)
                      +..+.++++-+|.+++
T Consensus        27 i~~~~~~~~RRr~~~~   42 (44)
T 2ks1_B           27 VALGIGLFMRRRHIVR   42 (44)
T ss_dssp             HHHHHHHHHHTTTCCS
T ss_pred             HHHHHHHHhhhhHhhc
Confidence            3333344444443333


Done!